BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002074
(972 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36428|SYA_ARATH Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3
Length = 1003
Score = 1535 bits (3974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 750/957 (78%), Positives = 834/957 (87%), Gaps = 30/957 (3%)
Query: 45 VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
VA MPG++P +WPA +VRDT+ FF K H W SSPVVP NDPTLLFANAGMNQYKP
Sbjct: 46 VAVMPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKP 105
Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
IFLGTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 106 IFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 165
Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
EAIEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWLK LP+ RVLPFGCK
Sbjct: 166 KEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGCK 225
Query: 225 DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
DNFWEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKP
Sbjct: 226 DNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKP 285
Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
LPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VD
Sbjct: 286 LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVD 345
Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
MAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+
Sbjct: 346 MAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSS 405
Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
V++VMGDVF ELK+ E I +II EEASF KTL KGIEKF+KA Q VQG LSG DAFI
Sbjct: 406 VIRVMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFI 465
Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
LWDTYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+
Sbjct: 466 LWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATST 525
Query: 525 LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
LHK GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES + VG+VL S+SFYAEQGGQ
Sbjct: 526 LHKAGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 585
Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
IFD G IEG FG+F V NVQI+GGFV+HIG L++ G SVG++VICKVDY+RRKLIAPN
Sbjct: 586 IFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPN 645
Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
HTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK E
Sbjct: 646 HTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDE 705
Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
LDVFSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW +S+E C
Sbjct: 706 LDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFC 765
Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
GGTH++NTREA+AFALLSEEGIAKGIRR+TAVTT A+ A AA LE+EV+DAS+ EGS
Sbjct: 766 GGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGS 825
Query: 825 LLEK------------------------------NQVRKAQKKVAEENLQKAVKVATETA 854
LEK N+VRKAQKK+AE+NL+K+VK+ATE A
Sbjct: 826 ALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAA 885
Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
E+AAS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEK
Sbjct: 886 ESAASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEK 945
Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
SDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV A+D+A+ FA+MKL
Sbjct: 946 SDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKL 1002
>sp|Q5A8K2|SYA_CANAL Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ALA1 PE=1 SV=1
Length = 969
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/976 (48%), Positives = 631/976 (64%), Gaps = 49/976 (5%)
Query: 35 SLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLF 94
+L+ R S++ P W A+KVR TF +F+ + H SS VVP NDPTLLF
Sbjct: 4 TLLRRMSSNTTIPTPNGSNH---WTASKVRSTFLDYFKKQQHTYVPSSSVVPHNDPTLLF 60
Query: 95 ANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154
ANAGMNQYKPIFLGT DP + + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEML
Sbjct: 61 ANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEML 120
Query: 155 GNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-L 213
GNWSFGDYFK EAI+++WELLTKVY L DRLY TYFGGDEK GL PD EA++ WLK +
Sbjct: 121 GNWSFGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGV 180
Query: 214 PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQ 273
P +LP +DNFWEMGD GPCGPCSEIHYDR G R+A++LVN DDP +E+WN+VFIQ
Sbjct: 181 PEDHILPGSVEDNFWEMGDQGPCGPCSEIHYDRIGGRNASALVNMDDPNVLEVWNVVFIQ 240
Query: 274 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 333
+NRE+DG+L+ LP KH+DTG+GFERL SILQNK SNYDTDVF+PIFD I++ TG RPY+G
Sbjct: 241 YNREADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTG 300
Query: 334 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 393
K G +D D +D AYRV+ADH+RTL+FAI DG P NEGR YVLRRILRR RY + +
Sbjct: 301 KFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNY 360
Query: 394 Q-DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAA 449
GFF LV++V++ ++FPE+ ++EI+ EE SF KTL +G E++ A
Sbjct: 361 PIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIA 420
Query: 450 QDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNK 509
+ LSG+D + L+DTYGFP+DLT+LMAEE GL +D EGF A +E+RE S+ + K
Sbjct: 421 SKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTK 480
Query: 510 QAGGAIVMDADATAALHKRGVL-ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNE 567
+ +D A + L + + T+D FK+ ++ K+ + IY GS+F++S+ P +
Sbjct: 481 DGKTLVKLDVHALSELDQNDAIPKTNDEFKY-GLENVKAKVVGIYDGSKFVDSIEDPSIQ 539
Query: 568 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
GI+L + FYAEQGGQ +D G I+G F V NVQ+Y G+V+H G++ + G+ +V
Sbjct: 540 YGILLDKTPFYAEQGGQEYDTGKLVIDGK-SEFNVANVQVYAGYVLHTGNIVD--GKLNV 596
Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
G+E+I D RR I NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFSH + V
Sbjct: 597 GDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAV 656
Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
+ L +IE+I N+ IK V+ K+ +L +AK INGLRAVFGE YPDPVRVV+IG V+
Sbjct: 657 TAKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVD 716
Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
DLLADP N +W IS E CGGTH++ T + + ++ E GIAKGIRRI AVT A+
Sbjct: 717 DLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQ 776
Query: 806 EAACSLEKEVDDAS--------------------KIEGSLLEKNQVRKAQKKV---AEEN 842
+ A E+E+D+AS K+ S+L+K ++ + K+ ++N
Sbjct: 777 KVANEFEQEIDNASSLPFGVAKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDN 836
Query: 843 LQKAVKVATETAEAAAS-------NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 895
L+ K T+ + N F ++ V + +A A+ EA+ + +Q +
Sbjct: 837 LKAKQKEETKKTLDVVNNWLNDKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIY 896
Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
T ET A C E +K + +E A + + G+ G GKG + G G
Sbjct: 897 LLTGETDKVAHGCYVSDEAI--AKGINANELAKAVSENIGGKAG-GKGNIVQGMGDKPQG 953
Query: 956 VTPAMDLAAEFAAMKL 971
+ A++ + KL
Sbjct: 954 INTAIEEVTKLFKEKL 969
>sp|Q54Y20|SYAC_DICDI Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=alaS PE=2 SV=1
Length = 946
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/944 (50%), Positives = 620/944 (65%), Gaps = 43/944 (4%)
Query: 62 KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
++R TF FF +K H SS V+P +DPTLLFANAGMNQ+KPIFLG +P ++ +KL
Sbjct: 5 QIRKTFIDFFREKCEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64
Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG+YFK EAI WAWELLT+VY+
Sbjct: 65 RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAITWAWELLTEVYK 124
Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
L +RLY TYF GD + GL D EA+++WL++LP RVLPFG K+NFWEMGD GPCGPCS
Sbjct: 125 LDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERVLPFGMKENFWEMGDQGPCGPCS 184
Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
EIHYD+ RD AS VN DDPT IEIWN+VFIQ+NRE+D SL+PLP KHVDTG+G ERLT
Sbjct: 185 EIHYDKVEGRDGASFVNADDPTLIEIWNLVFIQYNREADKSLRPLPQKHVDTGMGLERLT 244
Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
SI+Q +NYDTDVFMPIF AIQ+ TG PY GKVGA+D +VDMAYRV+ADHIRTL+F
Sbjct: 245 SIIQKVPTNYDTDVFMPIFAAIQEVTGYPEPYGGKVGAEDTQQVDMAYRVIADHIRTLTF 304
Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
+IADG+ P +GR VLRRILRRAVRYG + L A GFF+ LV++V+ G+ FPEL+++
Sbjct: 305 SIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPAGFFSKLVDVVIANFGEFFPELRKK 364
Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLM 479
HI+ ++ EE F KTL KGI +F+K + LS ++A+ L YGFP+DLT +M
Sbjct: 365 PEHIKMVLTREEDMFNKTLEKGIVEFEKMIKKSVNNTLSAENAYFLSTCYGFPIDLTTIM 424
Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
AEE+ VDI+G+ + E R Q K+ + + A+A A L + TDDSFK
Sbjct: 425 AEEKNYKVDIKGYEGLCEAQSEIDRKRQ-KEKKVELTLGAEANAWLKNNDIKPTDDSFK- 482
Query: 540 IWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG---FIEGL 594
++ H +SVIKAI+ G EF+++ G +G+VL +S+FYAEQGGQI+D G FI+
Sbjct: 483 --YKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQLSFIDDQ 540
Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
+F V++ +++GG+V+HIG L+ VG+ V VDY RR I NHT THM+N+A
Sbjct: 541 KTAFDVKDCKVFGGYVLHIGYLSYECDSLKVGDRVELTVDYTRRSPIMSNHTSTHMVNYA 600
Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
L+ +LGD +DQ+GS V ++ RFDFS G+ + + L +I+ IVN+QI +LDV +KE L
Sbjct: 601 LKNILGDGIDQRGSFVDAQRFRFDFSFGRAITKDELIKIDQIVNDQIFKQLDVHAKEVGL 660
Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
A AK INGLRAVFGEVYPDPVRVV++G VE L+ +P N EW + S E CGGTHLSNT++
Sbjct: 661 ASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEFCGGTHLSNTKQ 720
Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK------ 828
AE F + SEE + G+RRI AVT A A E LE ++A K+ GS L K
Sbjct: 721 AELFTITSEETLGAGVRRIVAVTGSEAASAIELNKELEVRFNNALKLSGSELAKEIVSLL 780
Query: 829 --------------------NQVRKAQKKVAEEN----LQKAVKVATETAEAAASNGKPF 864
+V+ Q+K +E Q+A +T+E A +
Sbjct: 781 DLLKVVTISASVRMNLVETLKEVQALQRKQVKEQETILAQQAQTYLEKTSEELAKSQPKV 840
Query: 865 CISRVEVGLDAAAVREAVLKVIEQKGMP-VMVFSTDETTNKAVVCAGVPEKSDQSKQLEV 923
+ V + + E + K+ + M +M+ S DE K VP+ S+ SK L
Sbjct: 841 FVDLVNFNSNTPLITETIKKIQTKSPMTAIMLISPDEEKGKVTCIGIVPKDSEISKTLTA 900
Query: 924 SEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
+ W+ + L G GK +A G G+ ++ A+ ++ EFA
Sbjct: 901 NAWVVKVTEVLG-GKGGGKVDVAQGVGSKLDKIDEAILVSREFA 943
>sp|P40825|SYA_YEAST Alanine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ALA1 PE=1 SV=3
Length = 983
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/893 (51%), Positives = 587/893 (65%), Gaps = 41/893 (4%)
Query: 26 TLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVV 85
T + N S + + S M D Q +W AT VR+TF +F+ K H KSSPVV
Sbjct: 4 TTGLRNLTLSFKKQLTTSTRTIMTIGDKQ--KWTATNVRNTFLDYFKSKEHKFVKSSPVV 61
Query: 86 PVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDT 145
P +DPTLLFANAGMNQYKPIFLGT DP + L RA N+QKCIRAGGKHNDL+DVGKD+
Sbjct: 62 PFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDS 121
Query: 146 YHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEA 205
YHHTFFEMLGNWSFGDYFK EAI ++W LLT+VY +P DRLY TYF GDEK GL PD EA
Sbjct: 122 YHHTFFEMLGNWSFGDYFKKEAITYSWTLLTEVYGIPKDRLYVTYFEGDEKLGLEPDTEA 181
Query: 206 RDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCI 264
R++W +P +LP KDNFWEMGD GPCGPCSEIHYDR G R+AASLVN DDP +
Sbjct: 182 RELWKNVGVPDDHILPGNAKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNMDDPDVL 241
Query: 265 EIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ 324
E+WN+VFIQFNRE DGSLKPLPAKH+DTG+GFERL S+LQ+ SNYDTDVF P+F+ IQ+
Sbjct: 242 EVWNLVFIQFNREQDGSLKPLPAKHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQE 301
Query: 325 ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAV 384
T RPYSG G +D D +D AYRV+ADH+RTL+FA+ADG P NEGR YVLRRILRR
Sbjct: 302 ITSVRPYSGNFGENDKDGIDTAYRVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGA 361
Query: 385 RYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG-- 441
RY + + G FF+ L ++ + D+FPEL + A + EI+ EEASF KTL +G
Sbjct: 362 RYARKYMNYPIGNFFSTLAPTLISQVQDIFPELAKDPAFLFEILDEEEASFAKTLDRGER 421
Query: 442 -IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEAR 500
EK+ AA + K L G+ + L+DTYGFP+DLT+LMAEE+GL +D GF A E+
Sbjct: 422 LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQESY 481
Query: 501 ERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIE 560
E S+ K I ++ + L+ V T+D FK+ +++K ++ G+ F++
Sbjct: 482 EASKRGGKKDQSDLIKLNVHELSELNDAKVPKTNDEFKYGSANVEGTILK-LHDGTNFVD 540
Query: 561 SVV-PGNEVGIVLASSSFYAEQGGQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTE 618
+ PG + GI+L + FYAEQGGQ +D G + F V NVQ+Y GFV H GSL E
Sbjct: 541 EITEPGKKYGIILDKTCFYAEQGGQEYDTGKIVIDDAAEFNVENVQLYNGFVFHTGSLEE 600
Query: 619 GAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFD 678
G+ SVG+++I D RR I NHT TH+LNFAL+E LG+ VDQKGS+V PEKLRFD
Sbjct: 601 --GKLSVGDKIIASFDELRRFPIKNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFD 658
Query: 679 FSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVV 738
FSH K V E L+++E I NEQIK L VF KE L AK I+G+RAVFGE YPDPVRVV
Sbjct: 659 FSHKKAVSNEELKKVEDICNEQIKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVV 718
Query: 739 AIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTT 798
++G+ +E+LLA+P N+EW S E CGGTH++ T + + F +L E GIAKGIRRI AVT
Sbjct: 719 SVGKPIEELLANPANEEWTKYSIEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 778
Query: 799 GLAYKAFEAACSLEKEVDDASK--------------------IEGSLLEKNQVR----KA 834
A++A A ++D A K + S++ KN+++ K
Sbjct: 779 TEAFEAQRLAEQFAADLDAADKLPFSPIKEKKLKELGVKLGQLSISVITKNELKQKFNKI 838
Query: 835 QKKVAEENLQKAVKVATETAEAA-----ASNGKPFCISRVEVGLDAAAVREAV 882
+K V +E +A K +T + + P+ + +++ +A A+ EA+
Sbjct: 839 EKAVKDEVKSRAKKENKQTLDEVKTFFETNENAPYLVKFIDISPNAKAITEAI 891
>sp|P50475|SYAC_RAT Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Aars PE=1
SV=3
Length = 968
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/968 (48%), Positives = 616/968 (63%), Gaps = 67/968 (6%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
A ++R+ F +F+ H SS +P++DPTLLFANAGMNQ+KPIFL T DP+ ++KL
Sbjct: 7 AREIRERFINYFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTVDPSHPMAKL 66
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK A + A ELLT+ +
Sbjct: 67 SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
+P +RLY TYFGGDE AGL PD E R IW L +++LP KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAKILPGNMKDNFWEMGDTGPCGP 186
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDTDGIDMAYRVLADHARTIT 306
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A+ADG P N GR YVLRRILRRAVRY E L A GFF LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
+++II EE F KTL +G + Q + + + G A++L+DTYGFP+DLT
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCQTIPGDTAWLLYDTYGFPVDLTG 426
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
L+AEE+GL+VD++GF A+ +S Q K AGG I++D A L +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDD 483
Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
S K+ + D + + A+ F++ VV G E G+VL + FYAEQGGQIF
Sbjct: 484 SPKYNYHSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIF 543
Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
DEG++ + S F V+N Q+ GG+V+HIG++ G VG++V +D RR+
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLRVGDQVRLFIDEPRRRP 600
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
+ NHT TH+LNFALR VLGD DQKGS+V P++LRFDF+ + E +++ E IVN
Sbjct: 601 VMSNHTATHILNFALRSVLGD-ADQKGSLVAPDRLRFDFTAKGAMSTEQIKKTEEIVNGM 659
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I+A V++ + LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S
Sbjct: 660 IEAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
E CGGTHL N+ A AF +++EE IAKGIRRI AVT A KA + +L
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEV 779
Query: 812 ------------EKEVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
+KE+ D ++ + + E+ + K+ KKV ++L +A K
Sbjct: 780 KVKAQSAPNKDVQKEIADLGEVLATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838
Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
V +T + SN +P I +E G A A+ EA LK+ + M+F+ D
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897
Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
K VP+ + ++ L+ SEW+ + G+ G GK A G + + A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955
Query: 964 AEFAAMKL 971
FA ++L
Sbjct: 956 TSFAQLRL 963
>sp|Q8CFX8|SYAC_MESAU Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus GN=Aars
PE=2 SV=1
Length = 968
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/968 (48%), Positives = 615/968 (63%), Gaps = 67/968 (6%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
A ++R+ F FF H SS +P++DPTLLFANAGMNQ+KPIFL T DP+ L+KL
Sbjct: 7 AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK A + A ELLT+ +
Sbjct: 67 SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
+P +RLY TYFGGDE AGL PD E + IW L +++LP KDNFWEMGDTGPCGP
Sbjct: 127 AIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAKILPGNMKDNFWEMGDTGPCGP 186
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTGMGLER 246
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A+ADG P N GR YVLRRILRRAVRY E L A GFF LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
+++II EE F KTL +G + Q + K + G A++L+DTYGFP+DLT
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
L+AEE+GL+VD++GF A+ +S Q K AGG I++D A L +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDD 483
Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
S K+ + D + + A+ F+E VV G E G+VL + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIY 543
Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
DEG++ + S F V+N Q+ GG+V+HIG++ G VG++V +D RR+
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
+ NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF+ + + ++ E IVN
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIVNAM 659
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I+A V++++ LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
E CGGTHL N+ A AF +++EE IAKGIRRI AVT A KA A SL
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRRSLSIMEA 779
Query: 812 ------------EKEVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
++E+ D + + + E+ + K+ KKV ++L +A K
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838
Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
V +T + SN +P I +E G A A+ EA LK+ + M+F+ D
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897
Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
K VP+ + ++ L+ SEW+ + G+ G GK A G + + A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLA 955
Query: 964 AEFAAMKL 971
FA ++L
Sbjct: 956 TSFAQLRL 963
>sp|Q5RC02|SYAC_PONAB Alanine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=AARS PE=2 SV=1
Length = 968
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/966 (48%), Positives = 617/966 (63%), Gaps = 63/966 (6%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
A+K+R F FF+ H SS +P++DPTLLFANAGMNQ+KPIFL T DP+ ++K
Sbjct: 7 ASKIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKP 66
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK A + A ELLT+ +
Sbjct: 67 SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
+P +RLY TYFGGDE AGL PD E + IW L +++LP KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A+ADG P N GR YVLRRILRRAVRY E L A GFF LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
+++II EE F KTL +G + Q + K + G A++L+DTYGFP+DLT
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
L+AEE+GL+VD++GF A+ +S Q K AGG I++D A L R + TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARDLEVTDD 483
Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
S K+ + F++ + + A+ F+E V G E G+VL + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543
Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
DEG++ + S F V+N Q+ GG+V+HIG++ G VG++V +D RR+
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
I NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF+ + + +++ E I NE
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I+A V++++ +LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S
Sbjct: 660 IEAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
E CGGTHL N+ A AF +++EE IAKGIRRI AVT A KA A SL+K
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAGSLKKPLSVMEA 779
Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
E+ D + + + +K+++R+ K + + ++L +A K
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839
Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
V +T + SN +P I +E G A A+ EA+ L + M+F+ D K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTAAMLFTVDNEAGKI 899
Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
VP+ + ++ L+ SEW+ + G+ G GK A G + + A+ LA
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957
Query: 966 FAAMKL 971
FA ++L
Sbjct: 958 FAQLRL 963
>sp|Q8BGQ7|SYAC_MOUSE Alanine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Aars PE=1 SV=1
Length = 968
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/968 (48%), Positives = 614/968 (63%), Gaps = 67/968 (6%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
A ++R+ F FF H SS +P++DPTLLFANAGMNQ+KPIFL T DP+ ++KL
Sbjct: 7 AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK A + A ELLT+ +
Sbjct: 67 SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
+P +RLY TYFGGDE AGL PD E R IW L +R+LP KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTGPCGP 186
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A+ADG P N GR YVLRRILRRAVRY E L A GFF LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
+++II EE F KTL +G + Q + K + G A++L+DTYGFP+DLT
Sbjct: 367 DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
L+AEE+GL+VD+ GF +E R +Q K AG I++D A L +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 483
Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
S K+ + D + + A+ F++ VV G E G+VL + FYAEQGGQI+
Sbjct: 484 SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 543
Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
DEG++ + S F V+N Q+ GG+V+HIG++ G VG++V +D RR+
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
+ NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF+ + + +++ E IVN
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 659
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I+A V++++ LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 719
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
E CGGTHL N+ A AF +++EE IAKGIRRI AVT A KA + +L+K
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 779
Query: 814 --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
E+ D + + + E+ + K+ KKV ++L +A K
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838
Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
V +T + SN +P I +E G A A+ EA LK+ + M+F+ D
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897
Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
K VP+ + ++ L+ SEW+ + G+ G GK A G + + A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955
Query: 964 AEFAAMKL 971
FA ++L
Sbjct: 956 TSFAQLRL 963
>sp|P49588|SYAC_HUMAN Alanine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
Length = 968
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/966 (48%), Positives = 617/966 (63%), Gaps = 63/966 (6%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
A+++R F FF+ H SS +P++DPTLLFANAGMNQ+KPIFL T DP+ ++KL
Sbjct: 7 ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK A + A ELLT+ +
Sbjct: 67 SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
+P +RLY TYFGGDE AGL D E + IW L +++LP KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A+ADG P N GR YVLRRILRRAVRY E L A GFF LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
+++II EE F KTL +G + Q + K + G A++L+DTYGFP+DLT
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
L+AEE+GL+VD++GF A+ +S Q K AGG I++D A L RG+ TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483
Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
S K+ + F++ + + A+ F+E V G E G+VL + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543
Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
DEG++ + S F V+N Q+ GG+V+HIG++ G VG++V +D RR+
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
I NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF+ + + +++ E I NE
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I+A V++++ LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
E CGGTHL N+ A AF +++EE IAKGIRRI AVT A KA A SL+K
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEA 779
Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
E+ D + + + +K+++R+ K + + ++L +A K
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839
Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
V +T + SN +P I +E G A A+ EA+ L + M+F+ D K
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899
Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
VP+ + ++ L+ SEW+ + G+ G GK A G + + A+ LA
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957
Query: 966 FAAMKL 971
FA ++L
Sbjct: 958 FAQLRL 963
>sp|O13914|SYA_SCHPO Alanine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ala1 PE=1 SV=1
Length = 959
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/964 (48%), Positives = 601/964 (62%), Gaps = 52/964 (5%)
Query: 51 ADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTA 110
A+ +VV WPA ++R TF K+FED H SS V+P +DPTLLFANAGMNQ+KPIFLGT
Sbjct: 3 AESEVVNWPANEIRRTFLKYFEDHGHTIVPSSSVIPYDDPTLLFANAGMNQFKPIFLGTV 62
Query: 111 DPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEW 170
DP++ +KL RAC++QKCIRAGGKHNDL+DVGKD YHHT FEMLGNWSFGDYFK EAI
Sbjct: 63 DPSSDFAKLKRACDSQKCIRAGGKHNDLEDVGKDNYHHTMFEMLGNWSFGDYFKKEAIAM 122
Query: 171 AWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWE 229
AW+LLT VY L D+LY TYFGG E++GL PD EAR +WL + SRV+P KDNFWE
Sbjct: 123 AWDLLTNVYGLKKDQLYVTYFGGHEESGLEPDLEARQLWLDIGIDESRVIPGSLKDNFWE 182
Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
MGD GPCGPCSEIHYDR GNR LVN DDP +EIWNIVFIQFNRE DGSL+PLP +H
Sbjct: 183 MGDQGPCGPCSEIHYDRIGNRTVPELVNMDDPNVLEIWNIVFIQFNREKDGSLRPLPNRH 242
Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
VDTG+GFERL S++QNK SNYDTDVF PIF IQ+ T ARPY+GK+G +D D +D AYRV
Sbjct: 243 VDTGMGFERLVSVIQNKTSNYDTDVFSPIFAKIQELTNARPYTGKMGDEDVDGIDTAYRV 302
Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKV 408
VADH+RTL+FAI+DG P NEGR YVLRRILRR RY + G FF+ L VV+
Sbjct: 303 VADHVRTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKKFGVPIGNFFSRLSLTVVEQ 362
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFIL 465
MGD FPELK++ +RE++ EE SF +TL +G E++ AA+ K L G D + L
Sbjct: 363 MGDFFPELKRKVDDVRELLDEEEESFSRTLDRGEKMFEQYAAAAKKTPSKTLQGNDVWRL 422
Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG--AIVMDADATA 523
++TYGFP+DLT LMAEE G+ +D GF A ++E S+ A + G +V+D A
Sbjct: 423 YETYGFPVDLTHLMAEEAGIKIDEPGFEAAQARSKEISKQASKGGSSGDDLLVLDVHALG 482
Query: 524 ALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVGIVLASSSFYA 579
AL K + TDD FK KSVIK IY F E G ++G++L ++FYA
Sbjct: 483 ALSKMDDIPETDDVFKHNSVS-LKSVIKGIYHKGGFQKSTEGFNSGEQLGLLLDRTNFYA 541
Query: 580 EQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
EQGGQ +D G I+G+ F V NVQ+Y G+V+H G L G +V + V+C+ D R
Sbjct: 542 EQGGQEYDTGHIVIDGV-ADFRVTNVQVYAGYVLHTGFLE--YGNLTVNDSVVCEYDEIR 598
Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
R + NHT TH+LN ALR LGD +DQ+GS+V EKLRFDFS+ + + L +E+
Sbjct: 599 RWHLMNNHTVTHILNLALRNTLGDGIDQRGSLVSQEKLRFDFSYKSSIPIDKLLLVENYC 658
Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
N I+ L V+SKE L++AK INGLRAVFGEVYPDPVRVV IG ++ LL +P+ +W
Sbjct: 659 NNVIQDNLSVYSKEVALSKAKEINGLRAVFGEVYPDPVRVVCIGVDIDTLLQEPKKPDWT 718
Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD 817
S E CGGTH + E + F +L E GIAKGIRRI AVT+ A + A + +
Sbjct: 719 KYSIEFCGGTHCDKSGEIKDFVILEENGIAKGIRRIVAVTSTEANRVSRLANEFDARIAK 778
Query: 818 ASKIEGSLLEKNQVRK------------AQKKVAEENLQKAVKVATETAEA--AASNGK- 862
K+ S ++ +++K +K +E + K K E +A AA +
Sbjct: 779 LEKMPFSPAKEAELKKISVDLSKLVVAAVRKHAMKERIAKITKQVQEHVKAINAAEQKEV 838
Query: 863 --------------PFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVV 907
F +++V + + A+ A+ + K + + ++D+ T A
Sbjct: 839 VNVVTEYFKENPDMSFVVAKVPISANPKALSFALTYAKKNLKDKSIYLLASDD-TKVAHA 897
Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
C PE K+L EW + GR G GKG G G + A++ A EF
Sbjct: 898 CLVSPE---AMKKLTPQEWSQKVCHSIGGRSG-GKGDTCQGVGDKPLSIDVAVEEAIEFF 953
Query: 968 AMKL 971
KL
Sbjct: 954 QGKL 957
>sp|P21894|SYAC_BOMMO Alanine--tRNA ligase, cytoplasmic OS=Bombyx mori PE=1 SV=1
Length = 967
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/968 (47%), Positives = 605/968 (62%), Gaps = 64/968 (6%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
++R TF FF K H SS +P++DPTLLFANAGMNQ+KPIFLG+ DPN+ +++
Sbjct: 7 GNEIRKTFIDFFIKKGHKYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGSVDPNSDMAQY 66
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
R NTQKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E WAWELLT V+
Sbjct: 67 IRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWELLTDVF 126
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
+L +RLY TYF GD +GL PD E R+IWL +P + +LP KDNFWEMG+TGPCGP
Sbjct: 127 KLSRERLYVTYFEGDPSSGLEPDLECRNIWLNLGVPEAHILPGSMKDNFWEMGETGPCGP 186
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSE+HYDR G+R+AA LVN DDP +EIWN+VFIQFNRE+DGSLK LP KH+D GLG ER
Sbjct: 187 CSELHYDRIGDREAAHLVNMDDPDVLEIWNLVFIQFNRETDGSLKLLPTKHIDCGLGLER 246
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S++QNK +NYDTD FMPIF AI+ ATG RPYSGKVG DD D +DMAYRV+ADH RTL+
Sbjct: 247 LVSVIQNKRANYDTDFFMPIFKAIENATGVRPYSGKVGVDDVDGIDMAYRVLADHARTLT 306
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A++DG CP N GR YVLRRILRRAVRY SE L A+ GFF LV VV+++GDVFPE+K+
Sbjct: 307 IALSDGGCPDNTGRGYVLRRILRRAVRYASEKLNAKPGFFGSLVYTVVELLGDVFPEIKK 366
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLTQ 477
I +I EE F KTLL+G + + + K L G A+ L+DTYGFP+DLTQ
Sbjct: 367 DPDSIVHVINEEEVQFLKTLLRGRNLLYRTIEKLNNSKTLPGDVAWRLYDTYGFPIDLTQ 426
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRGVLATDD 535
LM EE+GL VD+EG+ + E++ S Q K AG I +D A + L G+ ATDD
Sbjct: 427 LMCEEKGLNVDMEGYEKSRKESQLVS---QGKAAGQEDLIALDVHAISHLQDTGIPATDD 483
Query: 536 SFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
S K+ + F + I A+ EF+ + G E G++L +SFYAEQGG
Sbjct: 484 SPKYNYLPSSTDKDALYTFAPCTAKIVALRKNKEFVSEISSGQECGVILDRTSFYAEQGG 543
Query: 584 QIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
QIFDEG+ I+ F V+NVQ+ GG+V+H G + G VG+ + +D +RR+L
Sbjct: 544 QIFDEGYMVKIDDETVEFTVKNVQVKGGYVLHAGKV---EGILKVGDTLSLHIDTERRRL 600
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
+ NHT TH+LN LR+VLG+ DQ+GS+V+P++LRFDF++ P+ + ++ E+ + E
Sbjct: 601 VMNNHTGTHVLNNVLRKVLGNDSDQRGSLVMPDRLRFDFTNKGPMTIKQIKDTENEIKEI 660
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I V++ +L+EAK INGLRA+F E YPDPVRVV++G VEDL+ +P+ S
Sbjct: 661 IAKNKTVYANYTSLSEAKKINGLRAMFDEHYPDPVRVVSVGVPVEDLIKNPDAPTGFETS 720
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
E CGG+HL T + ++SEEGIAKGIRRI AVT A KA LE EV++ +
Sbjct: 721 VEFCGGSHLHRTSHIGEYVIVSEEGIAKGIRRIVAVTGPEAIKAINKLSVLENEVNNVAN 780
Query: 821 I----EGSLLEK----------NQVRKAQ----KKVAEENLQKAVKVATETAEAA----- 857
S+ K N++ +AQ KK N+ K +K + E A
Sbjct: 781 FIKEQNESISHKEVSKKIVDLTNEISQAQISYWKKDELRNMLKNLKKQLDDKERAEKAII 840
Query: 858 ----ASNGKPFCISRVEVGLDAAAVR--------EAVLKVIEQ--KGMPVMVFSTDETTN 903
K C+ R E + ++ + LK ++Q M FS D+ +
Sbjct: 841 ITQVTEKAKELCLERKESKYIVSELKAFGNTKALDGALKQVKQFCPNSAAMFFSVDKDAD 900
Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
K A VP KSD K L SEW+ + + + G+ G A G + + A+ +A
Sbjct: 901 KIYCLAAVP-KSDVEKGLLASEWVQSVVDIIGGKGGGKAES-AQASGNNPNSLNEAIQIA 958
Query: 964 AEFAAMKL 971
E+A KL
Sbjct: 959 NEYAKSKL 966
>sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=aars-2 PE=2 SV=1
Length = 968
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/969 (47%), Positives = 606/969 (62%), Gaps = 72/969 (7%)
Query: 60 ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
A++VR TF FF E K H SS V+P +DPTLLFANAGMNQ+KP+FLG ADPN+ L+K
Sbjct: 6 ASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65
Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
L RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWSFGDYFK E I WAWELLT V
Sbjct: 66 LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTV 125
Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
Y +PA+RLY + FGGDE G+ D+EARDIW +P R+L FG KDNFWEMGD GPCG
Sbjct: 126 YGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGDVGPCG 185
Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
PCSEIHYDR GNRDA+ LVN DDP +EIWN+VFIQFNRE G LKPLPAKH+D GLG E
Sbjct: 186 PCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGVLKPLPAKHIDCGLGLE 245
Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
RL +++Q+K SNYDTD+F PIF+AI + +G R Y+G +G +D D VDMAYRVVADH+RTL
Sbjct: 246 RLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRAYTGFIGDEDKDGVDMAYRVVADHVRTL 305
Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
+ A++DG P N GR YVLRRILRR VRY SE L AQ GFF LV +V+ ++G+ FPEL
Sbjct: 306 TIALSDGGRPDNSGRGYVLRRILRRGVRYASEKLNAQPGFFASLVPVVISILGETFPELS 365
Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLS--GQDAFILWDTYGFPLDL 475
+ + +II EE F KTL +G F++A Q + ++ G ++ L+DTYGFP DL
Sbjct: 366 RDPVTVMDIINDEEKQFLKTLSRGRVLFQRAVQSLPEGTMTFPGDVSWRLYDTYGFPADL 425
Query: 476 TQLMAEERGLLVDIEGFNNAMDEARER---SRSAQNKQAGGAIVMDADATAALHKRGVLA 532
TQLMAEE+GL VD N A +EAR + + SA + + +D A A L ++GV
Sbjct: 426 TQLMAEEKGLSVD----NTAFEEARRKAIETSSAGTGKFRDTLDLDVHALAELQQKGVPT 481
Query: 533 TDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
TDDS K+ + F+ I AI +F++ + G E I+L ++FYAE
Sbjct: 482 TDDSPKYAYTFTGEGSDAVYKFEPCVGKILAIRRDGKFVDQLAAGEEGAILLDRTNFYAE 541
Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
QGGQI+D G + + F V N Q+ GG+++ +GS G FSVG++V + D DR
Sbjct: 542 QGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGS---AEGSFSVGDQVNERFDEDR 598
Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
++LI NHT TH+LN+ALR+VL D DQKGS+V P+++RFDF++ + + +++ E
Sbjct: 599 KQLIMKNHTGTHVLNYALRKVLADS-DQKGSLVAPDRMRFDFTNKAGMTVQQVKKAEEYA 657
Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
+ I + V++K + L EAK + GLRA+F E YPDPVRVVA+G VE LL +P+ +E
Sbjct: 658 QQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDAEEGQ 717
Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA----CSLEK 813
+ + E CGGTHL N + SEE IAKGIRRI A+T A +A A LE+
Sbjct: 718 NTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARADRLTARLEE 777
Query: 814 EVDDASKIEGSLLEKNQVRKAQKKVAE----------------------ENLQK------ 845
E A K + L K++ + QKK+ E + +QK
Sbjct: 778 ESKHADKKDELLANKDKFKALQKKIQEIVDEANGAQLPYWRKDSIREKAKAIQKTLDGYT 837
Query: 846 -------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFST 898
A KV E E AA +P + V + + LK+++ VM FS
Sbjct: 838 KAQQAAVAEKVLGEAKELAAVAEQPTVLVHVFAANANSKAIDNALKLLKDT-KAVMAFSV 896
Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
+E + K V+C +KS S L+ +EW+ L G+ G GK A G + ++
Sbjct: 897 NEDSGK-VLCLAKVDKSLVSNGLKANEWVNEVCTVLGGKGG-GKDANAQLTGENVDKLDA 954
Query: 959 AMDLAAEFA 967
A++LA +FA
Sbjct: 955 AVELAQKFA 963
>sp|Q5AQL1|SYA_EMENI Alanine--tRNA ligase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=ala1 PE=3 SV=2
Length = 961
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/955 (48%), Positives = 610/955 (63%), Gaps = 54/955 (5%)
Query: 57 EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
+W + VRDTF ++F+ K H SSPV P++DPTLLF NAGMNQ+K IFLGT +PN+
Sbjct: 10 KWTSKLVRDTFLQYFQGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGTVNPNSDF 69
Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
++L A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI+++WELLT
Sbjct: 70 AQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLT 129
Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
+VY L RLY TYF G+++ GL PD EA+ +W +P +LP KDNFWEMGD GP
Sbjct: 130 QVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDHILPGNMKDNFWEMGDQGP 189
Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
CGPCSEIHYDR G R+AASLVN DDP +EIWN VFIQ+NRE+DGSL+ LP KHVDTG+G
Sbjct: 190 CGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYNRENDGSLRSLPNKHVDTGMG 249
Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
FERL S+LQ+K SNYDTDVF PIF IQ TGAR Y G+ G DD+D +D AYRVVADH+R
Sbjct: 250 FERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGTDDSDGIDTAYRVVADHVR 309
Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
TL FAI+DG P NEGR YV+RR+LRR RY + + G FF+ +V VV+ +GD+FP
Sbjct: 310 TLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTVVEQLGDMFP 369
Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGF 471
ELKQ++ + EI+ EE SF KTL +G +F++ AQ + L G D + L+DT+GF
Sbjct: 370 ELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKTAGDHKLHGADVWRLYDTFGF 429
Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
P+DLT++MAEERGL +D F A +A+E S+ Q K G++ +D L K GV
Sbjct: 430 PVDLTRIMAEERGLEIDDRQFEEARHKAKEASK-GQKKTTTGSVKLDVHDLGKLEKMNGV 488
Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVGIVLASSSFYAEQGGQIFD 587
TDDS KF + + IKAIY G F +++ ++GI+L ++FYAEQGGQ D
Sbjct: 489 PKTDDSAKF-EIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIGIILDRTNFYAEQGGQEND 547
Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
G I+G V +VQ Y G+V+H G + G+ F V + VIC+ D RR I NH
Sbjct: 548 TGRIVIDGQ-AELEVVDVQQYAGYVLHTGYMKYGS--FKVDDTVICEYDELRRWPIRNNH 604
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
T TH+LNFALR VLGD ++QKGS+V EKLRFDFSH PV L +IE + + I+
Sbjct: 605 TGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTDVELVKIEDLSTQYIRRNC 664
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
V+SKE L+ A+ I G+RAVFGE YPDPVRVV++G +++++L + E+ W S E CG
Sbjct: 665 LVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRWADFSIEFCG 724
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
GTH+ T + + +L E GIAKGIRRI AVT A++ A EK ++
Sbjct: 725 GTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRLAEEFEKRLNHLEAMPSGS 784
Query: 817 ----DASKIEGSL-------LEKNQVR----KAQKKVAEEN-------LQKAVKVATETA 854
+A +I+ L ++K++ R + KK+ +E +KAV+ T
Sbjct: 785 AKEQNAKQIQVELNQLSISAVQKSRFRERFTQINKKIIDEQKAQQKLESKKAVESITSYF 844
Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG--VP 912
A + K + I+++ + +A AV E L ++ K MV+ + V G VP
Sbjct: 845 AAPENANKSWLIAKLPISANAKAVSEC-LTYVKTKLADKMVYVLASSLEDGRVAHGCYVP 903
Query: 913 EK-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
+ SDQ SEW ++A+ G GKG + G G + +V A+DLA+E+
Sbjct: 904 KAISDQGA--SASEW-SSAVSRAVGGKAGGKGPTSIGNGINPEKVDDAVDLASEY 955
>sp|Q9VLM8|SYAC_DROME Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster
GN=Aats-ala PE=2 SV=1
Length = 966
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/970 (45%), Positives = 592/970 (61%), Gaps = 68/970 (7%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
A +VR+ + FF+++ H+ SS +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK
Sbjct: 6 AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
R NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E WAWE LT+
Sbjct: 66 VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
LP DRLY TYFGGD +GL PD E + +WL L +LP KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185
Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
CSE+H+DR G R LVN DDP +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245
Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
L S++QNK SNYDTD+F+P+FDAIQ TGA PY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTIT 305
Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
A+ADG P N GR YVLRRILRRAVRY +E L A+ GFF LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365
Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
HI +II EE F KTL +G + + + + + G A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425
Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
LMAEE+ L +D++G+ A + S Q GA I +D A + L ++GV
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479
Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
T+D+FK+ + D + S I A+ ++F+ + G + GIVL ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539
Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
GGQI+D+G + + F V V GG+++HIG + G VG+E+ +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596
Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
R L NH+ TH LN L +VLG +QKGS+V+PEKLRFDF+ + E + + E +
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVSKTEQLT 656
Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
E + + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G V++L +P+++
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGE 716
Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
S E CGGTHL + F + SEE IAKGIRRI A+T A KA + + + E+E+
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVR 776
Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
D S ++ + Q+ A KK NL K +K + E A
Sbjct: 777 LKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836
Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
K C + ++E + A+ A+ +V Q +F + +
Sbjct: 837 AAVSVTVVERAKTLCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896
Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
+K + C KS K L+ +EW+ L G+ G GK A GT+ +V +
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIVQ 955
Query: 962 LAAEFAAMKL 971
LA++FA KL
Sbjct: 956 LASKFAQSKL 965
>sp|Q14CH7|SYAM_MOUSE Alanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Aars2 PE=2
SV=1
Length = 980
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/824 (44%), Positives = 500/824 (60%), Gaps = 60/824 (7%)
Query: 63 VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
VRD F FF D++ H S+ V P DP+LLF NAGMNQ+KPIFLGT DP ++++ R
Sbjct: 37 VRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 96
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
N+QKC+RAGG+HNDL+DVG+D HHTFFEMLGNW+FG +YFK EA AWELLT+VY
Sbjct: 97 VVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYG 156
Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
+P DRL+ +YF GD + GL PD E RDIWL +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 157 IPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPC 216
Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
+EIHYD G + P +E+WN+VF+Q RE+DGSL+ LP +HVDTG+G ERL
Sbjct: 217 TEIHYDLAGGVGS--------PQLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGLERL 268
Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
++LQ K S YDTD+F P+ DAI Q+ GA PYSG+VGA D ++D AYRVVADHIRTLS
Sbjct: 269 VAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 328
Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
IADG PG G VLRRILRRAVRY +EVL+A GF LV +VV+ +G +PEL++
Sbjct: 329 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGSLVPVVVETLGSAYPELEKN 388
Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----TYGF 471
I +++ +EA+F +L +G + K L D F + W G
Sbjct: 389 SVKIASLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLSGNLGI 443
Query: 472 PLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
PLDL +LM EE+G+ +D G A EA+ R++ A+ Q + +D A LH++G+
Sbjct: 444 PLDLVELMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEADQE-DRLCLDVHALEELHRQGI 502
Query: 531 LATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLASSSFYA 579
TDDS K+ + F ++ + +Y TG+ + SV G G++L ++FYA
Sbjct: 503 PTTDDSPKYNYTLHPNGDYEFGLCEARVLQLYSETGTA-VASVGAGQRCGLLLDRTNFYA 561
Query: 580 EQGGQIFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
EQGGQ D G++ + + F V Q+ GGF++H E R VG++V VD
Sbjct: 562 EQGGQASDRGYLVRTGQQDML--FPVAGAQLCGGFILHEAMAPE---RLQVGDQVQLYVD 616
Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
R HT TH+L++ALR+ LG +Q+GS + PE+LRFD + + E LR +E
Sbjct: 617 KAWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPERLRFDVATQTLLTTEQLRTVE 676
Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
S V E + + VF +E LA I GLR+ EVYPDPVRVV++G V L P ++
Sbjct: 677 SYVQEVVGQDKPVFMEEVPLAHTARIPGLRS-LDEVYPDPVRVVSVGVPVAHALG-PASQ 734
Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
+ S ELC GTHL +T ++ E + KGI R+ A+T A +A E SL +E
Sbjct: 735 AAMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLSQE 794
Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAA 857
V+ AS+ ++ + + + E L K + TE AE+A
Sbjct: 795 VEAASE---------RLSQGSRDLPEAHRLSKDIGRLTEVAESA 829
>sp|Q5JTZ9|SYAM_HUMAN Alanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1
SV=1
Length = 985
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)
Query: 67 FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
F FF D++ H S+ V P DP+LLF NAGMNQ+KPIFLGT DP ++++ R N+
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
QKC+RAGG HNDL+DVG+D HHTFFEMLGNW+FG +YFK EA AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165
Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
RL+ +YF GD KAGL PD E RDIWL +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 225
Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
YD G A P +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 277
Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
Q K S YDTD+F P+ +AIQQ A PY G+VG D + D AYRVVADHIRTLS I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337
Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
G PG G VLRRILRRAVR+ E+LKA GF LV +VV+ +GD +PEL++ A I
Sbjct: 338 GIFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397
Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
+++ +EA+F +L +G + + L D F + W G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452
Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
+LM EE+G+ +D G A +EA+ R+R A+ Q G + +D A L ++GV TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 511
Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
DS K+ + F ++ + +YT + SV G G++L ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571
Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
D G++ E + F V Q+ GGF++H E +G++V VD R
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LRLGDQVQLHVDEAWRL 626
Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
HT TH+LN+ALR+ LG +Q+GS + PE+LR D + P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 686
Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
+ + V+ +E LA + GLR+ EVYPDPVRVV++G V L DP ++ L
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744
Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
S ELC GTHL T ++ + ++KG R+ AVT A +A E SL +EV A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAAT 804
Query: 820 K 820
+
Sbjct: 805 E 805
>sp|D3ZX08|SYAM_RAT Alanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Aars2
PE=2 SV=1
Length = 985
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/813 (45%), Positives = 491/813 (60%), Gaps = 55/813 (6%)
Query: 63 VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
VRD F FF D++ H S+ V P DP+LLF NAGMNQ+KPIFLGT DP ++++ R
Sbjct: 37 VRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 96
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
N+QKC+RAGG+HNDL+DVG+D HHTFFEMLGNW+FG +YFK EA AWELLT+VY
Sbjct: 97 VANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQVYG 156
Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
+P DRL+ +YF GD K GL PD E RDIWL +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 157 IPEDRLWVSYFSGDSKTGLDPDLETRDIWLSLGVPASRVLSFGLQENFWEMGDTGPCGPC 216
Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
+EIHYD G P +E+WN+VF+Q RE+DGSL LP +HVDTG+G ERL
Sbjct: 217 TEIHYDLAGGMGP--------PQLVELWNLVFMQHYREADGSLHLLPQQHVDTGMGLERL 268
Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
++LQ K S YDTD+F P+ DAI Q+ PYSG+VGA D ++D AYRVVADHIRTLS
Sbjct: 269 VAVLQGKHSTYDTDLFSPLLDAIHQSCRVPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 328
Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
IADG PG G VLRRILRRAVRY +EVL+A GF LV +VV +G +PEL++
Sbjct: 329 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGNLVPVVVATLGAAYPELQKN 388
Query: 420 EA-----HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD---- 467
I +++ +EA+F +L +G + K L D F + W
Sbjct: 389 SVKVLIWEIANLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLS 443
Query: 468 -TYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAAL 525
G PLDL QLM EE+G+ +D G A EA+ R++ A+ Q G + +D A L
Sbjct: 444 GNLGIPLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEAAQEEG-LCLDVHALEEL 502
Query: 526 HKRGVLATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLAS 574
H++G+ TDDS K+ + F ++ + +Y TG+ + SV G G++L
Sbjct: 503 HRQGIPTTDDSPKYNYSLRPNGDYEFGLCEAQVLQLYSETGTA-VASVGEGQRCGLLLDR 561
Query: 575 SSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
++FYAEQGGQ D G++ F V Q+ GGF++H E VG+ V
Sbjct: 562 TNFYAEQGGQASDRGYLIRTGQQDVLFPVARAQVCGGFILHEAMAPEC---LQVGDRVQL 618
Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
VD R HT TH+LN+ALR+ LG +Q+GS + PE+LRFD + P+ E LR
Sbjct: 619 YVDKAWRMGCMVKHTATHLLNWALRQTLGPTTEQRGSHLNPERLRFDVATQTPLTTEQLR 678
Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
+ES V E + + V+ +E LA I GLR+ EVYPDPVRVV++G V LA P
Sbjct: 679 TVESYVQEAVGQDKPVYMEEVPLAHTARIPGLRS-LDEVYPDPVRVVSVGVPVAQALA-P 736
Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
++ L S ELC GTHL +T ++ + + KGI R+ A+T A +A E SL
Sbjct: 737 ASQAALQTSVELCCGTHLLSTGAVGDLVIIGDRQLVKGITRLLAITGEQAQQAREVGQSL 796
Query: 812 EKEVDDASK--IEGS--LLEKNQVRKAQKKVAE 840
+EV+ AS+ GS LLE +++ K ++ E
Sbjct: 797 SQEVEVASERLSRGSRDLLEAHRLSKDIGRLIE 829
>sp|Q8KG04|SYA_CHLTE Alanine--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=alaS PE=3 SV=1
Length = 885
Score = 632 bits (1629), Expect = e-180, Method: Compositional matrix adjust.
Identities = 356/798 (44%), Positives = 472/798 (59%), Gaps = 80/798 (10%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R +F FF K H +S+PV+P DPTLLF NAGMNQ+K +FLG + TR
Sbjct: 5 EIRQSFLDFFAGKEHRIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLGKG-----TREYTR 59
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWEL+T+V++L
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIGWAWELMTEVWKL 119
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCGPC 239
P +RLYAT + DE E+ +W + S +L FG KDNFWEMG+TGPCGPC
Sbjct: 120 PKERLYATVYHDDE--------ESFKLWQSETDIEHSHILKFGDKDNFWEMGETGPCGPC 171
Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
SEIH D T + LVN D IE+WN+VFIQ++R++DG+L PLP KHVDTG+GFER+
Sbjct: 172 SEIHIDLTPDGSGGPLVNVGDHRVIELWNLVFIQYDRQADGTLVPLPQKHVDTGMGFERV 231
Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
++LQ K SNYD+DVF P+FD I + TG Y+ + + D+A RV+ADH RTL+F
Sbjct: 232 AAVLQGKSSNYDSDVFAPLFDRITELTGT-VYTASLDSPS----DIAMRVIADHCRTLTF 286
Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
A++DG+ PGNEGR YVLRRILRRAVRY L + +V ++V+ MGDVFPEL+++
Sbjct: 287 ALSDGAMPGNEGRGYVLRRILRRAVRYAG-TLGCHEPIIYKMVEVLVRTMGDVFPELEKQ 345
Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLT 476
+A + +II AEE SF TL +G E F + D++ +SG DAF L+DT+GFPLDLT
Sbjct: 346 QATVEKIIRAEEESFLVTLGRGTEIFNEVVADMKTAGSTTISGADAFKLYDTFGFPLDLT 405
Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
+LMA E GL +D GF + M E + R+R MD + DD
Sbjct: 406 RLMAAEVGLGIDEAGFEHCMMEQKTRAR------------MDRKGKMQMQ-------DDG 446
Query: 537 FKFIWFQDHKSVIKAIY----TGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
++ WF Y T + + + V G+++ +VL + FYAE GGQ+ D G +E
Sbjct: 447 GEWQWFAPEAPTTFVGYDMLETEATLVAARVSGDKLLMVLDQTPFYAESGGQVGDHGTLE 506
Query: 593 GLFGSFYVRNVQIYGGFVIHI----------GSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
V + + G ++H+ ++T F V VD DRR
Sbjct: 507 TAGYRLDVTDTRKDGEQIVHVVTSAHDKVRDCAVTPADVSFDGVVSVKAAVDRDRRVATE 566
Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
NHT TH+L+ ALR+VLG+HV QKGS+V PE+LRFDFSH V E L ++E VN +I+
Sbjct: 567 RNHTATHLLHAALRKVLGEHVQQKGSLVTPERLRFDFSHFSKVSAEELEQVEHEVNAEIR 626
Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
V E G A FG+ Y D VRVV + IS E
Sbjct: 627 KAASVTKHADVPYEEALALGALAFFGDKYADRVRVVEVP----------------GISIE 670
Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
LCGGTH+ N + ++SE +A GIRRI AV TG A +A L +E D +I+
Sbjct: 671 LCGGTHVGNIGQIGMVKIVSESSVAAGIRRIEAV-TGAAAEAL-----LWQEYRDLQEIK 724
Query: 823 GSLLEKNQVRKAQKKVAE 840
+LL+ +A K+ E
Sbjct: 725 -NLLKLKADEEAGPKIKE 741
>sp|A6VA71|SYA_PSEA7 Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain PA7) GN=alaS
PE=3 SV=1
Length = 874
Score = 627 bits (1618), Expect = e-178, Method: Compositional matrix adjust.
Identities = 388/937 (41%), Positives = 537/937 (57%), Gaps = 90/937 (9%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R+ F +FFE+K H SS ++P NDPTLLF NAGMNQ+K FLG +
Sbjct: 3 SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT K
Sbjct: 58 TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117
Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
LP ++L+ T + A D+EA DIW K +PA R++ G DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169
Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
MGDTGPCGPC+EI +D + D IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229
Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
A VDTG+G ER++++LQ+ SNY+ D+F + A +A G DDA +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL--- 279
Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
+VVADHIR+ SF IADG P NEGR YVLRRI+RRA R+G++ L A+ FF+ +V +V
Sbjct: 280 -KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAALV 337
Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
MGD FPELKQ++AHI ++ EE F KTL +G++ ++ ++QG V+ G F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFKLY 397
Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
DTYGFP+DLT +A ER L +D +GF M+ RER+R A A MD ++
Sbjct: 398 DTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS----- 446
Query: 527 KRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
++ D +F+ +Q I A++ + +E + G E +VL + FYAE GGQ
Sbjct: 447 ---LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESGGQ 503
Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
+ D G++E F VR+ GG +H G + EG SVG V +VD R+ A N
Sbjct: 504 VGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAEGG--LSVGAAVKAEVDASVRQATALN 561
Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
H+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH + + PE L+ +E IVN +I+
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRRN 621
Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
+V ++E + AK G A+FGE Y D VRV+++G S ELC
Sbjct: 622 TEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665
Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
GGTH+S T + F + SE G+A G+RRI AVT LAY + EAA ++ D
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAAGLVKGSRD 725
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--GKPFCISRVEVGLD 874
+ G+LLE+N ++ +K E+ KA A + AAA + G +R++ GLD
Sbjct: 726 NLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVDIKGAKVLAARLD-GLD 781
Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
A+ V ++ + G V++ E K V+ AGV + D + QL+ E L
Sbjct: 782 GKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAAAA 837
Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G G G+ +A G GTDAA++ A+ LA F L
Sbjct: 838 VGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874
>sp|Q9I553|SYA_PSEAE Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=alaS PE=3 SV=1
Length = 874
Score = 622 bits (1603), Expect = e-177, Method: Compositional matrix adjust.
Identities = 387/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R+ F +FFE+K H SS ++P NDPTLLF NAGMNQ+K FLG +
Sbjct: 3 SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT K
Sbjct: 58 TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117
Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
LP ++L+ T + A D+EA DIW K +PA R++ G DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169
Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
MGDTGPCGPC+EI +D G + D IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227
Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
LPA VDTG+G ER++++LQ+ SNY+ D+F + A +A G DDA +
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279
Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
+VVADHIR+ SF IADG P NEGR YVLRRI+RRA R+G++ L A+ FF+ +V
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335
Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
+V MGD FPELKQ++AHI ++ EE F KTL +G++ ++ ++QG V+ G F
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395
Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
L+DTYGFP+DLT +A ER L +D +GF M+ RER+R A A MD ++
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446
Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
++ D +F+ +Q I A++ + +E + G E +VL + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501
Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
GQ+ D G++E F VR+ GG +H G + G SVG V +VD R+ A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGGAVKAEVDASVRQATA 559
Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
NH+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH + + E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619
Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
+V ++E + AK G A+FGE Y D VRV+++G S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663
Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
LCGGTH+S T + F + SE G+A G+RRI AVT LAY + EAA ++
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723
Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
D+ G+LLE+N ++ +K E+ KA A + AAA G +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779
Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
LD A+ V ++ + G V++ E K V+ AGV + D + QL+ E L
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835
Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G G G+ +A G GTDAA++ A+ LA F L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874
>sp|Q02I63|SYA_PSEAB Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=alaS PE=3 SV=1
Length = 874
Score = 620 bits (1599), Expect = e-176, Method: Compositional matrix adjust.
Identities = 386/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R+ F +FFE+K H SS ++P NDPTLLF NAGMNQ+K FLG +
Sbjct: 3 SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT K
Sbjct: 58 TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117
Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
LP ++L+ T + A D+EA DIW K +PA R++ G DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169
Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
MGDTGPCGPC+EI +D G + D IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227
Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
LPA VDTG+G ER++++LQ+ SNY+ D+F + A +A G DDA +
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279
Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
+VVADHIR+ SF IADG P NEGR YVLRRI+RRA R+G++ L A+ FF+ +V
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335
Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
+V MGD FPELKQ++AHI ++ EE F KTL +G++ ++ ++QG V+ G F
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395
Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
L+DTYGFP+DLT +A ER L +D +GF M+ RER+R A A MD ++
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446
Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
++ D +F+ +Q I A++ + +E + G E +VL + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501
Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
GQ+ D G++E F VR+ GG +H G + G SVG V +VD R+ A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGAAVKAEVDASVRQATA 559
Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
NH+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH + + E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619
Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
+V ++E + AK G A+FGE Y D VRV+++G S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663
Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
LCGGTH+S T + F + SE G+A G+RRI AVT LAY + EAA ++
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723
Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
D+ G+LLE+N ++ +K E+ KA A + AAA G +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779
Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
LD A+ V ++ + G V++ E K V+ AGV + D + QL+ E L
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835
Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G G G+ +A G GT+AA++ A+ LA F L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTNAAKLDEALALAQRFVEQGL 874
>sp|Q87LR3|SYA_VIBPA Alanine--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=alaS PE=3 SV=1
Length = 860
Score = 618 bits (1593), Expect = e-176, Method: Compositional matrix adjust.
Identities = 377/921 (40%), Positives = 515/921 (55%), Gaps = 100/921 (10%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
+VR+ F KFFE K H +SS +VP NDPTLLF NAGMNQ+K FLG + TR
Sbjct: 7 EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT V +L
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKL 121
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
PADRL T + D+EA DIW K +PA R++ G K DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173
Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
DTGPCGPC+EI YD G R D IEIWN VF+QFNR +DG+++PLP
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231
Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
VDTG+G ER+++I+Q SNY+ DVF + A + G S + +
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280
Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
RV+ADHIR+ SF I DG P NEGR YVLRRI+RRAVR+G++ L AQ FF+ LV ++
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339
Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
+MG ELK+++A + +++ EE +FG+TL +G+ +A ++ GKVL G+ F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399
Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
TYGFP DLT +A ER +D EGF AM+E R+R+R A G D +A
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAA----- 448
Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
+ D +F + K S + A++ ++S+ G++ IVL + FYAE GGQ
Sbjct: 449 ---IKVDTQTEFCGYVGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D G I G F V + Q G + H G + EG + G+EV VD +RR I+ NH
Sbjct: 506 GDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+L+ ALR+VLG+HV QKGS+V E LRFDFSH + V L+ +E +VN QI+
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + + AK G A+FGE Y D VRV+++G S ELCG
Sbjct: 624 VIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
G H SNT + F + SE GIA GIRRI AVT A A EA A+K E L
Sbjct: 667 GIHASNTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEA---------QAAKYEEKL 717
Query: 826 LEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
E Q + K E+ LQK A + A +A NG ++ +E G D+ +R
Sbjct: 718 AESAQ----KAKTLEKELQKLKDKMAAAESANIMGKAVEVNGTKVLVAALE-GADSKNLR 772
Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
V + Q G V++ + + T +K + AGV + D +++ + + + + G+ G
Sbjct: 773 TMVDDIKNQMGSGVVLLA-NVTDDKVGLIAGVTK--DLVGKVKAGDLVKMVAEQVGGKGG 829
Query: 940 KGKGGLASGQGTDAAQVTPAM 960
G+ +A GTD + + A+
Sbjct: 830 -GRPDMAQAGGTDVSALPEAI 849
>sp|Q11V49|SYA_CYTH3 Alanine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469) GN=alaS PE=3 SV=1
Length = 877
Score = 617 bits (1590), Expect = e-175, Method: Compositional matrix adjust.
Identities = 364/869 (41%), Positives = 488/869 (56%), Gaps = 71/869 (8%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R F FF K H S+P+V NDPTL+F NAGMNQ+K FLG P K
Sbjct: 3 SAEIRQQFLDFFASKGHQIVPSAPIVNKNDPTLMFTNAGMNQFKDYFLGNETP-----KY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
R +TQKC+R GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT VY
Sbjct: 58 RRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKEEAIAWSWELLTSVY 117
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
+LP DRLY T F GD+K LA D EA + W K++ R+L KDNFWEMG+ GPCGPC
Sbjct: 118 KLPKDRLYVTIFEGDDKEKLARDTEAYNFWKKWIAEDRILLGNKKDNFWEMGEQGPCGPC 177
Query: 240 SEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
SEIH D RT D +LVNND P +EIWN VFIQFNR++DGSL+ LP KHVDTG+
Sbjct: 178 SEIHVDLRTDEEVKAVDGKTLVNNDHPQVVEIWNNVFIQFNRKADGSLEELPDKHVDTGM 237
Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
GFERL +Q K SNYDTDVF P+ D + +A G K GAD +K D+A RV+ADHI
Sbjct: 238 GFERLCMAIQKKKSNYDTDVFTPMIDFVAKAAGI-----KYGAD--EKTDIAMRVMADHI 290
Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
R +SF IADG P N YV+RRILRRAVRY L ++ F LV ++ + VFP
Sbjct: 291 RAISFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKEPFLYKLVAVLADQLAHVFP 350
Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
ELK ++ + +++ EE SF +TL G+ K ++ ++++ K + G+ AF L+DT+GF
Sbjct: 351 ELKSQQDFVAKVVQEEEISFLRTLDIGLSKLEQIREELKAKKATTIDGKTAFELYDTFGF 410
Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
PLDL QL+A E GL VD GF+ M ++RS+ A A V +D T ++
Sbjct: 411 PLDLIQLIARENGLTVDEAGFDTEMAAQKQRSKKA-------ASVETSDWT-------IV 456
Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPG-NEVGIVLASSSFYAEQGGQIFDEGF 590
DD +F+ + S + I ++ + G ++ +VL ++ FYAE GGQ D G
Sbjct: 457 TEDDEVEFVGYDHLISTSRII----KYRQVKTKGKDQYQLVLDTTPFYAESGGQAGDTGT 512
Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
+ V N +IHI + V CKV+ +R L NH+ TH+
Sbjct: 513 LVQGDKKIKVLNTVKENNLIIHITEQLPA----DLKAPVDCKVNVLQRSLTENNHSATHL 568
Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
L+ AL++VLG HV+QKGS+V LRFDFSH V E L+++E IVNE+I+ + + +
Sbjct: 569 LHAALKQVLGSHVNQKGSLVNESVLRFDFSHFSKVTEEELKKVELIVNEKIRENISLNER 628
Query: 711 E-ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
+ EAK + G A+FGE Y + VR++ S S ELCGGTH+
Sbjct: 629 RNVPIEEAKKL-GAMALFGEKYGEYVRMITFDD---------------SFSRELCGGTHV 672
Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKEVDDASKIE 822
S+T + F + SE +A G+RRI A+T A L K D K
Sbjct: 673 SSTGKIGFFKITSESSVAAGVRRIEALTATAAEVFVDEQQTTLAKITELMKNPKDLVKSL 732
Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
LLE+ V QK++ E +K+ +A + G I V A+R+
Sbjct: 733 EDLLEERIV--LQKQLDEYQAEKSKAIAKSLKDTVEKVGDINVIRAKLVLPSVDAMRQVA 790
Query: 883 --LKVIEQKGMPVMVFSTDETTNKAVVCA 909
LK + V+ + D N AV+ +
Sbjct: 791 YDLKQTVDNLLLVLAVNVDGKPNIAVMIS 819
>sp|Q6LMU3|SYA_PHOPR Alanine--tRNA ligase OS=Photobacterium profundum GN=alaS PE=3 SV=2
Length = 873
Score = 616 bits (1589), Expect = e-175, Method: Compositional matrix adjust.
Identities = 375/932 (40%), Positives = 523/932 (56%), Gaps = 87/932 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FFE K H +SS +VP NDPTLLF NAGMNQ+K FLG + TR
Sbjct: 7 EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGI-----EKRSYTR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI++AWE LT V L
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTDVLGL 121
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
P DRL T + D+EA DIW K + PA R++ G DNFW+MGD
Sbjct: 122 PQDRLLVTIY--------ETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173
Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
TGPCGPCSEI YD G R D IEIWN VF+QFNR++DG+++PLP
Sbjct: 174 TGPCGPCSEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPKP 231
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ +I+Q SNY+ D+F + + G S + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKKSAEVIGYEDLS-----------NQSLR 280
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
VVADHIR+ +F I DG P NEGR YVLRRI+RRAVR+G++ L A FF LV + ++
Sbjct: 281 VVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGASGAFFYKLVGPLAEI 339
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG ELK+R+A + +I+ EE +FG+TL +G+ A ++ GK L G+ F L+DT
Sbjct: 340 MGTAGDELKKRQALVEKILKIEEDNFGRTLDRGLTILNDALDNLSGKELDGETVFKLYDT 399
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP DLT +A ER +D EGFNNAM+ R+R+R A G +D + +
Sbjct: 400 YGFPADLTNDVARERDFTIDEEGFNNAMEAQRQRAREA------GKFGVDYNES------ 447
Query: 529 GVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
+ D + +F + +S I A+Y E ++S++ G + I+L ++ FYAE GGQ
Sbjct: 448 --IKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCG 505
Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
D G + F V + Q +G + H GSL +GA +VG+++ +VD RR I NH+
Sbjct: 506 DAGVLTAENTVFNVSDTQKFGAAIGHQGSLVQGA--LNVGDKLEAQVDVVRRTAITLNHS 563
Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
TH+L+ ALR +LG+HV QKGS+V P+ LRFDFS+ + V PE LR IE +VNEQI+
Sbjct: 564 ATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVVNEQIRLNHS 623
Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
+ + + AK G A+FGE Y D VRV+++G S ELCGG
Sbjct: 624 IDTNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCGG 666
Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSL 825
H NT + F + SE GIA GIRRI AVT A A A +L E K + S+
Sbjct: 667 IHAKNTGDIGLFKITSEGGIAAGIRRIEAVTGAAAIDALHAQEALLSETASIVKSDAASV 726
Query: 826 LEKNQVRKAQKKVAEENLQKAVK--VATETA----EAAASNGKPFCISRVEVGLDAAAVR 879
K A K E+++Q+ A E+A +A NG I++++ G D A+R
Sbjct: 727 ATKVSALLAHSKQLEKDIQQLQDKLAAQESAGLLDQAKEINGVKVLITQLD-GADNKALR 785
Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
+ ++ + G ++V + + +K + GV + D + +++ E + Q + G+ G
Sbjct: 786 GMLDEIKNKLGSGIVVLG-NVSGDKVGLIVGVTK--DLTGKVKAGELVNMVAQQVGGKGG 842
Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G+ +A GTDAA + A++ + KL
Sbjct: 843 -GRPDMAQAGGTDAAALPAALESVTPWLTEKL 873
>sp|A1BD33|SYA_CHLPD Alanine--tRNA ligase OS=Chlorobium phaeobacteroides (strain DSM
266) GN=alaS PE=3 SV=1
Length = 888
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 382/929 (41%), Positives = 526/929 (56%), Gaps = 87/929 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R +F FF+ K H +S+PV+P++DPTLLF NAGMNQ+K +FL D T+ R
Sbjct: 5 EIRQSFLDFFDRKGHTIVRSAPVIPLDDPTLLFTNAGMNQFKDVFL---DKGTR--PYVR 59
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+ L
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAISWAWELLTSVWHL 119
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
P +RLYAT + DE++ L E +P ++ F KDNFWEMG+TGPCGPCSE
Sbjct: 120 PKERLYATVYYDDEESYLLWQEETD------IPHDHIIKFDEKDNFWEMGETGPCGPCSE 173
Query: 242 IHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTS 301
IH D T + LVN D IE+WN+VFIQ+NR++DG L+PLP KHVDTG+GFER+ +
Sbjct: 174 IHIDLTEDGSGKPLVNAGDYRVIELWNLVFIQYNRQADGRLEPLPQKHVDTGMGFERVCA 233
Query: 302 ILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
++Q K SNYDTDVF P+FD I + TG Y+ + D D+A RV+ADH RTL+FA+
Sbjct: 234 VMQGKASNYDTDVFRPLFDRITEITGV-SYNASLD----DPSDIAMRVLADHARTLTFAL 288
Query: 362 ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREA 421
DG+ P NEGR YVLRRILRRA+RY S+ L + LV + MGDVFPEL++++
Sbjct: 289 TDGAMPSNEGRGYVLRRILRRALRY-SKTLGCSEPLLYRLVETLAASMGDVFPELRKQQQ 347
Query: 422 HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLDLTQL 478
+ II AEE SF TL +GIE F + V+ + V+SG DAF L+DT+GFPLDLT+L
Sbjct: 348 AVSRIIRAEEESFLATLDRGIEIFNELIAAVRSRGTTVVSGDDAFRLYDTFGFPLDLTRL 407
Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
MA E G VD EGF+ M E + R+R + + H +G D +
Sbjct: 408 MAAEAGFEVDEEGFDRCMKEQKTRARQDRRDKQ--------------HLKG-----DEGE 448
Query: 539 FIWFQDHKSVIKAIYTGSEFIESV----VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
+ WF ++ + Y E + S+ + + + +VL + FYAE GGQ D G+IE
Sbjct: 449 WTWFSAERTSVFTGYHSLEELASITGVSIFSDRLLVVLDRTPFYAESGGQCGDRGWIETA 508
Query: 595 FGSFYVRNVQIYGGFVIHI-----GSLTEGA---GRFSVGE-EVICKVDYDR--RKLIAP 643
V + + G ++H+ S+++GA S E ++ C+ DR R+
Sbjct: 509 AYRLRVSDTRKDGDMIVHLVTEVRDSVSDGAISPADLSFDEGKLACRASVDRSDRQGTER 568
Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
NHT TH+L+ ALR LG HV QKGS V E+LRFDFSH + E L +ES VNEQI++
Sbjct: 569 NHTATHLLHAALRRTLGQHVQQKGSFVSSERLRFDFSHFARLTSEELAIVESEVNEQIRS 628
Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
V + + G A FG+ Y D VRVV I +S EL
Sbjct: 629 AEPVVKHQDIPYDEAIARGALAFFGDKYADRVRVVEIA----------------GLSVEL 672
Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKEVD 816
CGGTH+ + + F ++SE +A G+RRI A+T A Y+ + + K
Sbjct: 673 CGGTHVDSIGQIGLFKIVSESSVASGVRRIEALTGKAAEVLLWKEYRELQDIRQMLKLKA 732
Query: 817 DASKIEGSLLE----KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG 872
D I G + E K ++ K + E L ++ + + AE+ S F R+E
Sbjct: 733 DEEVI-GRIAELADSKKELEKQLQVYRTEALSGILQRSLDAAESVGS--IRFMTLRLE-H 788
Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
+D ++R+AVL + E+ + T+E K + A E++ L+ + + A
Sbjct: 789 VDQDSLRQAVLALREKDPASTGLLCTEE-DGKVSLTAFAGERAVGEFGLDAGKLVREAAA 847
Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
++G G GK A+ G D + A D
Sbjct: 848 FVRG-GGGGKPEFATAGGKDPEGIQKAFD 875
>sp|A4VJB3|SYA_PSEU5 Alanine--tRNA ligase OS=Pseudomonas stutzeri (strain A1501) GN=alaS
PE=3 SV=2
Length = 874
Score = 608 bits (1568), Expect = e-173, Method: Compositional matrix adjust.
Identities = 377/936 (40%), Positives = 531/936 (56%), Gaps = 88/936 (9%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R+ F +FFE+K H SS ++P NDPTLLF NAGMNQ+K FLG +
Sbjct: 3 SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT K
Sbjct: 58 TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117
Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
+LP ++L+ T + A D+EA DIW K +PA R++ G DNFW
Sbjct: 118 WLKLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169
Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
MGDTGPCGPC+EI +D + D IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229
Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
A VDTG+G ER++++LQ+ SNY+ D+F + +A A G A++ +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278
Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
+VVADHIR+ F IADG P NEGR YVLRRI+RRA R+G++ L A+ FF+ +V +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHRIVAALV 337
Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
MGD FPELKQ++AHI ++ EE F KTL +G++ ++ + G V+ G+ F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGEVVFKLY 397
Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
DTYGFP+DLT +A ER L +D EGF M RER+RSA A MD ++
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446
Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
++ + +FI +Q K A++ ++S+ G E +VL + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGSGKVLALFKQGMLVDSLSAGEEGVVVLDQTPFYAESGGQ 503
Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
I D G++E F VR+ GG +H G + +G + G +V VD R+ A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGGAFLHHGIVD--SGTLTTGAQVEATVDASVRQATALN 561
Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
H+ TH+L+ ALRE+LG+HV QKGS+V ++LRFDFSH + + PE LR +E VN +I+
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621
Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
V +E + AK G A+FGE Y D VRV+ +G S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDTVRVLTMGG---------------GFSVELC 665
Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
GGTH++ T + F + SE G+A G+RRI AVT LAY + +AA ++ +
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNDAEEQLKQAASLVKGSRE 725
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
+ G LLE+N R+ +K++ + + A + A +A NG +R + GLD
Sbjct: 726 NLLDKLGGLLERN--RQLEKELEQLKAKAASAAGNDLAASAVEVNGIRVLAARQD-GLDG 782
Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
A+ V ++ + G V++ + +K V+ AGV + D + +L+ + L
Sbjct: 783 KALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMRQAAAAV 838
Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G G G+ +A G GTDAA++ A+ LA FA L
Sbjct: 839 GGKGGGRPDMAQGGGTDAAKLDEALALALPFAQQAL 874
>sp|A8GA09|SYA_SERP5 Alanine--tRNA ligase OS=Serratia proteamaculans (strain 568)
GN=alaS PE=3 SV=2
Length = 875
Score = 608 bits (1567), Expect = e-173, Method: Compositional matrix adjust.
Identities = 362/934 (38%), Positives = 529/934 (56%), Gaps = 89/934 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG L K
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
+RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI +AWELLT
Sbjct: 60 SRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGEN 119
Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
+ LP +RL+ T + D+EA DIW + + PA R++ G DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ETDDEAFDIWQQQIGVPAERIIRIGDNKGGAFASDNFW 171
Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
+MGDTGPCGPC+EI YD + D IEIWN+VF+QFNR+SDG++ PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMLPLP 231
Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
VDTG+G ER+ ++LQ+ SNY+ D+F + A+ + TGA K +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYEIDLFSKLIAAVAKVTGATDLDNK-----------S 280
Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
RV+ADHIR+ +F ++DG P NEGR YVLRRI+RRAVR+G+ +L A+D FF LV ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVTPSNEGRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVAPLI 339
Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
+VMG ELK++++ + +++ EE F +TL +G+ + ++QG L G+ AF L+
Sbjct: 340 EVMGPAADELKRQQSLVEQVLKTEEDQFARTLERGLTLLDEELANLQGDTLDGETAFRLY 399
Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
DTYGFP+DLT + ERGL VD GF AM+ R R+R + AD + +
Sbjct: 400 DTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG--------FGADYNSMIR 451
Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
G F + +S + A++ + + + G E +VL + FY E GGQ+
Sbjct: 452 VDGA----SQFSGYDHEQQQSTVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVG 507
Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
D+G ++ F V + Q YG + H G L+ G+ V + V K+D RR I NH+
Sbjct: 508 DKGVLKAANADFEVSDTQKYGQAIGHQGKLSHGS--LKVNDRVDAKIDTVRRNRIRLNHS 565
Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
TH+L+ ALR+ LG+HV QKGS+V + LRFDFSH + + PE +R +E +VN+QI+ L
Sbjct: 566 ATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRTVEDLVNQQIRRNLP 625
Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
V ++ L +AK G A+FGE Y D VRV+ +G S ELCGG
Sbjct: 626 VQTEVMALDDAKG-KGAMALFGEKYDDNVRVLTMG----------------DFSTELCGG 668
Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
TH S T + F +LSE G A GIRRI AVT A L ++V A ++G
Sbjct: 669 THASRTGDIGLFRILSESGTAAGIRRIEAVTGDGAIATLHQQNDLLQDV--AHLVKGDSN 726
Query: 824 SLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
+L +K ++ R +K++ + ++ Q A + A+ +++A NG +S+++ ++A
Sbjct: 727 NLTDKVRAVLDRTRALEKELQQLKDQQAAQESASLSSKAKMVNGVQLLVSQLD-NVEAKM 785
Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
+R V + Q G ++V +T +K + AGV + D + +++ E + Q + G+
Sbjct: 786 LRTMVDDLKNQLGSAIIVLAT-TADDKVSLIAGVTK--DLTDRVKAGELIGNVAQQVGGK 842
Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G G+ +A GTD + + A+D + A KL
Sbjct: 843 GG-GRPDMAQAGGTDVSALPAALDSVEAWVASKL 875
>sp|Q7MHR6|SYA_VIBVY Alanine--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=alaS
PE=3 SV=1
Length = 860
Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust.
Identities = 366/914 (40%), Positives = 519/914 (56%), Gaps = 86/914 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
+VR+ F KFFE K H SS +VP NDPTLLF NAGMNQ+K FLG + TR
Sbjct: 7 EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT+ +L
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
P DRL T + D+EA DIW + +PA R++ G K DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMG 173
Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
DTGPCGPC+EI YD G R D IEIWN VF+QFNR +DG+++PLP
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231
Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
VDTG+G ER+++I+Q SNY+ DVF + A + G S + +
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEIVGCEDLS-----------NQSL 280
Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
RV+ADHIR+ SF IADG P NEGR YVLRRI+RRAVR+G++ L AQ FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339
Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
VMG ELK+++A + +++ EE +FG+TL +G+ +A ++GK L G+ F L+D
Sbjct: 340 VMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399
Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
TYGFP DLT +A ER +D GF AM+E R+R+R A G D +A K
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNA-----K 448
Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
V A + + Q+ V+ A++ E ++ G++ ++L + FYAE GGQ D
Sbjct: 449 IKVDAQSEFCGYTSTQERSDVV-ALFVEGEETATLSAGDKAIVILQETPFYAESGGQCGD 507
Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
G ++ G F V + Q G + H G L EG + G++V VD +RR I+ NH+
Sbjct: 508 SGVLKTESGLFQVEDTQKLGNAIAHHGVLVEGV--LAKGDQVTAIVDAERRAAISLNHSA 565
Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
TH+L+ ALR+VLG+HV QKGS+V E LRFDFSH + V L+ +E +VN QI+ +
Sbjct: 566 THLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTI 625
Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
+ + AK G A+FGE Y D VRV+++G S ELCGG
Sbjct: 626 ETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668
Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGSLL 826
H SNT + F + SE GIA GIRRI AVT A +A +A A E+++ DA+ SL
Sbjct: 669 HASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALEAIDAQARKFEEKLQDAANKAKSL- 727
Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
+ ++++ + K+A + + E A G +++++ G D A+R V ++
Sbjct: 728 -EKEIQQLKDKLASQASANLIDQVKEIA------GVKVLVAKLD-GADNKALRGMVDELK 779
Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
Q G +++ + +K + AGV + D + +++ E + Q + G+ G G+ +A
Sbjct: 780 NQMGSGIIMLG-NVADDKVGLIAGVTQ--DLTSKVKAGELVNMVAQQVGGK-GGGRPDMA 835
Query: 947 SGQGTDAAQVTPAM 960
GTD++ + A+
Sbjct: 836 QAGGTDSSALPSAL 849
>sp|A7MYT5|SYA_VIBHB Alanine--tRNA ligase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=alaS PE=3 SV=1
Length = 865
Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust.
Identities = 373/920 (40%), Positives = 516/920 (56%), Gaps = 93/920 (10%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
+VR+ F KFFE K H +SS +VP NDPTLLF NAGMNQ+K FLG + TR
Sbjct: 7 EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT+ +L
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
PADRL T + D+EA DIW K +PA R++ G K DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMG 173
Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
DTGPCGPC+EI YD G R D IEIWN VF+QFNR++DG+++PLP
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231
Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
VDTG+G ER+++I+Q SNY+ DVF + A + G S + +
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280
Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
RV+ADHIR+ SF I DG P NEGR YVLRRI+RRAVR+G++ L AQ FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339
Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA-----AQDVQGKVLSGQDA 462
+MG ELK+++A + +++ EE +FG+TL +G+ +A +Q GKVL G+
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNISSQGTDGKVLDGETV 399
Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
F L+DTYGFP DLT +A ER +D EGF AM+E R+R+R A N D
Sbjct: 400 FKLYDTYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYN 451
Query: 523 AALHKRGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
AA+ D +F + K S + A++ +ES+ G++ IVL + FYAE
Sbjct: 452 AAIK------VDTQTEFCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAE 505
Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
GGQ D G I G F V + Q G + H G + EG + G+EV VD +RR
Sbjct: 506 SGGQCGDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAA 563
Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
I+ NH+ TH+L+ ALR++LG+HV QKGS+V + LRFDFSH + V L+ +E +VN Q
Sbjct: 564 ISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQ 623
Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
I+ + + + AK G A+FGE Y D VRV+++G S
Sbjct: 624 IRRNHVIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFS 666
Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
ELCGG H S+T + F + SE GIA GIRRI AVT A A EA + +E S
Sbjct: 667 TELCGGIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESA 726
Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
+ LEK +++K + K+A A + A + NG I+ +E G D +R
Sbjct: 727 QKAKSLEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRT 778
Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
V + Q G V++ + + +K + AGV + D +++ + + + + G+ G
Sbjct: 779 MVDDIKNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG- 834
Query: 941 GKGGLASGQGTDAAQVTPAM 960
G+ +A GTD A + A+
Sbjct: 835 GRPDMAQAGGTDVAALPAAI 854
>sp|A4XWE2|SYA_PSEMY Alanine--tRNA ligase OS=Pseudomonas mendocina (strain ymp) GN=alaS
PE=3 SV=2
Length = 874
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 377/938 (40%), Positives = 530/938 (56%), Gaps = 92/938 (9%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R+ F FFE+K H SS ++P NDPTLLF NAGMNQ+K FLG +
Sbjct: 3 SAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT K
Sbjct: 58 TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117
Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
LP ++L+ T + A D+EA +IW K + PA R++ G DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYEIWNKEIGVPAERMIRIGDNKGAPYASDNFW 169
Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
MGDTGPCGPC+EI +D + D IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229
Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
A VDTG+G ER++++LQ+ SNY+ D+F + A +A G A++ +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQNLLAASAKAIGC-----------ANEGQAS 278
Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
+VVADHIR+ SF IADG P NEGR YVLRRI+RRA R+G++ L A+ FF +V +V
Sbjct: 279 LKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFYQIVAALV 337
Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
MG+ FPELKQ++AHI ++ EE F KTL +G++ ++ +QG V+ G F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAGLQGSVIPGDIVFKLY 397
Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
DTYGFP+DLT +A ER L VD EGF M+ RER+RSA A MD +A
Sbjct: 398 DTYGFPVDLTADIARERELSVDEEGFEREMEAQRERARSAS------AFGMDYNA----- 446
Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
++ D +F+ ++ I A++ ++S+ G E +VL + FYAE GGQ
Sbjct: 447 ---LVKVDADTRFLGYEGTSGSGKIIALFKAGAAVDSLAEGEEGVVVLDQTPFYAESGGQ 503
Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
I D G++E F VR+ GG +H G + +G SVG V + + R+ A N
Sbjct: 504 IGDCGYLESAGMRFDVRDTTKAGGAFLHHGVVAKGG--LSVGTSVKAEAEASVRQATALN 561
Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
H+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH + + PE L+++E IVN +I+
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKQLEDIVNAEIRKN 621
Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
+V ++E + AK G A+FGE Y D VRV+++G S ELC
Sbjct: 622 SEVETEETDIETAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665
Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
GGTH+S T + F + SE G+A G+RRI AVT A EAA ++ D
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAWLNAAEEQLKEAASLVKGSRD 725
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
+ +L+E+N R+ +K++ + + A + A +A G +R++ GLD
Sbjct: 726 NVLDKLSALIERN--RQLEKELEQLKAKAASAAGNDLAGSAVDLKGTKVLAARLD-GLDG 782
Query: 876 AAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
A+ V ++ + G V++ DE K V+ AGV + D + +L+ + L
Sbjct: 783 KALLALVDQLKNKLGSGVILLGGVFDE---KVVLVAGVTQ--DLTAKLKAGD-LMRQAAA 836
Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
G G G+ +A G G DA ++ A+ LAA F L
Sbjct: 837 AVGGKGGGRPDMAQGGGVDAGKLDEALALAATFVEQGL 874
>sp|Q8DC49|SYA_VIBVU Alanine--tRNA ligase OS=Vibrio vulnificus (strain CMCP6) GN=alaS
PE=3 SV=1
Length = 860
Score = 605 bits (1560), Expect = e-172, Method: Compositional matrix adjust.
Identities = 365/914 (39%), Positives = 518/914 (56%), Gaps = 86/914 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
+VR+ F KFFE K H SS +VP NDPTLLF NAGMNQ+K FLG + TR
Sbjct: 7 EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI +AWE LT+ +L
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
P DRL T + D+EA DIW + +PA R++ G K DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMG 173
Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
DTGPCGPC+EI YD G R D IEIWN VF+QFNR +DG+++PLP
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231
Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
VDTG+G ER+++I+Q SNY+ DVF + A + G S + +
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEIVGCEDLS-----------NQSL 280
Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
RV+ADHIR+ SF IADG P NEGR YVLRRI+RRAVR+G++ L AQ FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339
Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
MG ELK+++A + +++ EE +FG+TL +G+ +A ++GK L G+ F L+D
Sbjct: 340 AMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399
Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
TYGFP DLT +A ER +D GF AM+E R+R+R A G D +A K
Sbjct: 400 TYGFPADLTNDVAREREFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNA-----K 448
Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
V A + + Q+ V+ A++ E ++ G++ ++L + FYAE GGQ D
Sbjct: 449 IKVDAQSEFCGYTSTQERSDVV-ALFVEGEETATLSAGDKAIVILQETPFYAESGGQCGD 507
Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
G ++ G F V + Q G + H G L EG + G++V VD +RR I+ NH+
Sbjct: 508 SGVLKTESGLFQVEDTQKLGNAIAHHGVLVEGV--LAKGDQVTAIVDAERRAAISLNHSA 565
Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
TH+L+ ALR+VLG+HV QKGS+V E LRFDFSH + V L+ +E +VN QI+ +
Sbjct: 566 THLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHAI 625
Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
+ + AK G A+FGE Y D VRV+++G S ELCGG
Sbjct: 626 ETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668
Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGSLL 826
H SNT + F + SE GIA GIRRI AVT A +A +A A E+++ DA+ SL
Sbjct: 669 HASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALEAIDAQARKFEEKLQDAANKAKSL- 727
Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
+ ++++ + K+A + + E A G +++++ G D A+R V ++
Sbjct: 728 -EKEIQQLKDKLASQASANLIDQVKEIA------GVKVLVAKLD-GADNKALRGMVDELK 779
Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
Q G +++ + +K + AGV + D + +++ E + Q + G+ G G+ +A
Sbjct: 780 NQMGSGIIMLG-NVADDKVGLIAGVTQ--DLTSKVKAGELVNMVAQQVGGK-GGGRPDMA 835
Query: 947 SGQGTDAAQVTPAM 960
GTD++ + A+
Sbjct: 836 QAGGTDSSALPSAL 849
>sp|A4SGJ6|SYA_PROVI Alanine--tRNA ligase OS=Prosthecochloris vibrioformis (strain DSM
265) GN=alaS PE=3 SV=2
Length = 885
Score = 604 bits (1558), Expect = e-172, Method: Compositional matrix adjust.
Identities = 376/872 (43%), Positives = 486/872 (55%), Gaps = 115/872 (13%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
++ +R +F FF K+H +S+PV+P +DPTLLF NAGMNQ+K +FL
Sbjct: 3 SSDIRQSFLDFFVGKSHAIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKG-----TRSY 57
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
+RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+
Sbjct: 58 SRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAITWAWELLTVVW 117
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCG 237
+LP +RLYAT + D+E+ IW + + +L FG KDNFWEMG+TGPCG
Sbjct: 118 KLPEERLYATVY--------HDDDESFRIWEEKTSIRPDHILRFGDKDNFWEMGETGPCG 169
Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
PCSEIH D T + +LVN DDP IE+WN+VFIQ++R+ DG L+PLP +HVDTG+GFE
Sbjct: 170 PCSEIHIDLTPDGSGRALVNADDPQAIELWNLVFIQYDRQVDGRLEPLPQRHVDTGMGFE 229
Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
R+ +++Q K SNYDTDVF P+FD I + TG + GA D D+A RV+ADH RTL
Sbjct: 230 RVCAVMQGKSSNYDTDVFRPLFDTITELTGV-----EYGASMHDPQDIAMRVIADHARTL 284
Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
SFA++DG+ P NEGR YVLRRILRRA+RY + L + LV V MGDVFPEL+
Sbjct: 285 SFALSDGAMPSNEGRGYVLRRILRRALRYAKD-LGYNKPILHRLVATVADSMGDVFPELR 343
Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLD 474
R+ + I+ AEE SF TL +GIE F V+G+ L G+DAF L+DTYGFP D
Sbjct: 344 DRQDAVARIVKAEEESFLVTLDRGIEIFNGLVGKVRGEGSSTLEGEDAFKLYDTYGFPFD 403
Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGGAIVMDADATAALHKRGVLAT 533
LT+LMA GL VD EGF M E + R+R + KQ GGA
Sbjct: 404 LTRLMASSAGLQVDGEGFERCMQEQKTRARQDRREKQRGGA------------------- 444
Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVV----PGNEVGIVLASSSFYAEQGGQIFDEG 589
+ + WF D + Y G E S++ + +VL + FYAE GGQ D G
Sbjct: 445 -EEGSWEWFSDLHATEFTGYDGLEADASIIGISRSKKNLLLVLDRTPFYAESGGQTGDRG 503
Query: 590 FIEGLFGSFYVRNVQIYGGFVIHI---------------GSLTEGAGRFSVGEEVICKVD 634
+IE V + Q G +H+ + G GR V VD
Sbjct: 504 WIETGEYRLEVTDTQKDGDSFVHVVTRAFDNVRDSEADPADIAVGPGR------VHASVD 557
Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
R+ NHT TH+L+ LR LG HV QKGS+V PE+LRFDFSH + PE + +E
Sbjct: 558 RKLRQATERNHTATHLLHAVLRHTLGAHVQQKGSLVNPERLRFDFSHFSKLTPEEIDAVE 617
Query: 695 SIVNEQIKAELDVFSKEATLAEAKC------INGLRAVFGEVYPDPVRVVAIGRKVEDLL 748
S VN+ I+ EATL A G A FG+ Y D VRVV I
Sbjct: 618 SAVNDCIR------QAEATLKHADVPYDDAITKGALAFFGDKYADLVRVVEIP------- 664
Query: 749 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA------- 801
IS ELCGGTH+ N + F ++ E +A G+RRI A+T A
Sbjct: 665 ---------GISVELCGGTHVDNVGQIGLFKIVGESSVAAGVRRIEALTGRAAEELMWNE 715
Query: 802 YKAFEAACSLEK---EVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAA 858
Y+ L K E A K+ L E+ R +K++AE L+ V + +A+A
Sbjct: 716 YRELHDVRQLLKMKAEEPPAEKVAAILEER---RALEKQLAE--LKAEVLLVKLQGDASA 770
Query: 859 SNGKPFC--ISRVEVGLDAAAVREAVLKVIEQ 888
C ++RV G DA +R A + +Q
Sbjct: 771 LEDVCGCRIVARVVDGADAEGLRYAAQMLRQQ 802
>sp|Q7MV54|SYA_PORGI Alanine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=alaS PE=3 SV=1
Length = 876
Score = 603 bits (1556), Expect = e-171, Method: Compositional matrix adjust.
Identities = 330/749 (44%), Positives = 443/749 (59%), Gaps = 64/749 (8%)
Query: 60 ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
+ ++R++F FF K H S+P+V DPTL+F NAGMNQ+K I LG NT+ +K
Sbjct: 4 SKEIRESFKTFFASKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILG----NTE-AKY 58
Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
TR ++QKC+R GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE L V
Sbjct: 59 TRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVTVL 118
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
L RLYAT F G+ + GL DNEA W +FLP R++ DNFWEMGDTGPCGPC
Sbjct: 119 GLDPQRLYATVFEGNPEEGLDRDNEAASYWAQFLPEERIINGNKHDNFWEMGDTGPCGPC 178
Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
SEIH D + + A L+N P IEIWN+VF+Q+NR++D SL PLP K +DTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADASLTPLPHKVIDTGM 238
Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
GFERL LQ K SNYDTDVF P+ + TG +G + D+A RVVADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIRTLATMTG-------IGYGEDSTSDIAMRVVADHI 291
Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
RT++FAI DG P N YV+RRILRRAVRYG L ++ F L+ ++ MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLPTLIDTMGDAYP 351
Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
EL+ + I +I EE SF +TL GI +K D + VL G AF L+DT+GF
Sbjct: 352 ELQAQRELISRVIKEEEESFLRTLETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGF 411
Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
PLDLT L+ E G+ VD GF+ M + +ER+R+A +AG +V+ + G
Sbjct: 412 PLDLTALILSENGMTVDESGFDTEMQKQKERARNAAAVEAGDWVVLREGESKF---SGYD 468
Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
T+ + + ++ K K + +VL+ + FYAE GGQ+ D G +
Sbjct: 469 FTETETEILRYRQVKQKNKEYFQ---------------VVLSDTPFYAEMGGQVGDSGQL 513
Query: 592 EGLFGSFY-VRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
G Y + + + +H+ L E S + + +++ D+R+ NHT TH
Sbjct: 514 IDESGVAYDIFDTKRENNLSVHLMKKLPE-----STTDTFVARINQDKRRQAEANHTATH 568
Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
+L+ ALREVLG HV+QKGS V PE LRFDFSH + PE +R++E +V+E+I+A+
Sbjct: 569 LLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEELVSERIRADFQREE 628
Query: 710 -KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
++ +AEA+ + G A+FGE Y + VRV+ G S ELCGGTH
Sbjct: 629 FRDVPIAEAQAM-GAMALFGEKYGEEVRVLKYGS-----------------SVELCGGTH 670
Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVT 797
+ +T AF +++E IA G+RRI AVT
Sbjct: 671 IPSTGMIGAFRIVTESSIASGVRRIEAVT 699
>sp|Q1R804|SYA_ECOUT Alanine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=alaS PE=3 SV=1
Length = 876
Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF+ AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|A1AEN7|SYA_ECOK1 Alanine--tRNA ligase OS=Escherichia coli O1:K1 / APEC GN=alaS PE=3
SV=1
Length = 876
Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF+ AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|B1IUY2|SYA_ECOLC Alanine--tRNA ligase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=alaS PE=3 SV=1
Length = 876
Score = 603 bits (1554), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPANENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|Q8X3W8|SYA_ECO57 Alanine--tRNA ligase OS=Escherichia coli O157:H7 GN=alaS PE=3 SV=2
Length = 876
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|Q7UBU3|SYA_SHIFL Alanine--tRNA ligase OS=Shigella flexneri GN=alaS PE=3 SV=1
Length = 876
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V +D RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADIDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMNLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|Q0T1C3|SYA_SHIF8 Alanine--tRNA ligase OS=Shigella flexneri serotype 5b (strain 8401)
GN=alaS PE=3 SV=1
Length = 876
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V +D RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADIDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMNLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|A8A3H4|SYA_ECOHS Alanine--tRNA ligase OS=Escherichia coli O9:H4 (strain HS) GN=alaS
PE=3 SV=1
Length = 876
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|P00957|SYA_ECOLI Alanine--tRNA ligase OS=Escherichia coli (strain K12) GN=alaS PE=1
SV=2
Length = 876
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|B1XCM5|SYA_ECODH Alanine--tRNA ligase OS=Escherichia coli (strain K12 / DH10B)
GN=alaS PE=3 SV=1
Length = 876
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|Q3YYG6|SYA_SHISS Alanine--tRNA ligase OS=Shigella sonnei (strain Ss046) GN=alaS PE=3
SV=1
Length = 876
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|A7ZQC5|SYA_ECO24 Alanine--tRNA ligase OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=alaS PE=3 SV=1
Length = 876
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|Q0TEI3|SYA_ECOL5 Alanine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=alaS PE=3 SV=1
Length = 876
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSERLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|B2U049|SYA_SHIB3 Alanine--tRNA ligase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=alaS PE=3 SV=1
Length = 876
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRVVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|Q32CN1|SYA_SHIDS Alanine--tRNA ligase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=alaS PE=3 SV=1
Length = 876
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G + +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L AG VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|B1LQ15|SYA_ECOSM Alanine--tRNA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=alaS PE=3 SV=1
Length = 876
Score = 601 bits (1549), Expect = e-170, Method: Compositional matrix adjust.
Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT K +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP +RL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNYD D+F + A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG +LK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448
Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
++ D + +F + DH + + A++ + ++++ G E +VL + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506
Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
D+G ++G SF V + Q YG + HIG L G+ VG+ V VD RR I NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLATGS--LKVGDAVQADVDEARRARIRLNH 564
Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624
Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
+ + L AK G A+FGE Y + VRV+++G S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667
Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
GTH S T + F ++SE G A G+RRI AVT A A EV +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727
Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
A K+ L Q+ K +++ E+ A + A +++A NG +S + G++
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784
Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
+R V + Q G ++V +T K + AGV + D + +++ E + Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841
Query: 937 RCGKGKGGLASGQGTD 952
+ G G+ +A GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856
>sp|A8ANQ1|SYA_CITK8 Alanine--tRNA ligase OS=Citrobacter koseri (strain ATCC BAA-895 /
CDC 4225-83 / SGSC4696) GN=alaS PE=3 SV=1
Length = 875
Score = 600 bits (1548), Expect = e-170, Method: Compositional matrix adjust.
Identities = 360/915 (39%), Positives = 515/915 (56%), Gaps = 89/915 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FF K H SS +VP NDPTLLF NAGMNQ+K +FLG N +R
Sbjct: 7 EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
A +Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI++AWELLT +
Sbjct: 62 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121
Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
LP DRL+ T + D+EA +IW K +P R++ G DNFW+M
Sbjct: 122 ALPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173
Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
GDTGPCGPC+EI YD + D IEIWNIVF+QFNR++DG+++PLP
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ ++LQ+ SNY+ D+F + +A+ + TGA S K + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDLSNK-----------SLR 282
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
V+ADHIR+ +F IADG P NE R YVLRRI+RRAVR+G+ +L A++ FF LV ++ V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG ELK+++A + +++ EE F +TL +G+ + + G L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP+DLT + ER + VD GF AM+E R R+R A AD A +
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453
Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
G FK + + A++ + ++++ G E +VL + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHLELNGKVTALFVDGKAVDAISAGQEAVVVLDQTPFYAESGGQVGDK 509
Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
G ++G +F V + Q YG + HIG+L+ G+ VG+ V VD RR I NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGTLSTGS--LKVGDAVQADVDDARRARIRLNHSAT 567
Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
H+++ ALR++LG HV QKGS+V + LRFDFSH + + P +R +E +VN QI+ L V
Sbjct: 568 HLMHAALRQILGTHVAQKGSLVNDKVLRFDFSHNEAMKPSEIRAVEDLVNAQIRRNLPVE 627
Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
+ L AK G A+FGE Y D VRV+++G S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDRVRVLSMG----------------DFSTELCGGTH 670
Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
S T + F ++SE G A G+RRI AVT A A ++ D A ++G
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIATLHAES--DRLSDIAQLLKGDSQNL 728
Query: 824 -----SLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
S+LE+ R+ +K++ + Q A + A +++A NG +S + G++
Sbjct: 729 GEKVRSVLER--TRQLEKELQQLKEQAAAQESANLSSKAVDINGVKLLVSEL-AGVEPKM 785
Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
+R V + Q G V+V +T K + AGV + D + +++ E + Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTVIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGK 842
Query: 938 CGKGKGGLASGQGTD 952
G G+ +A GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856
>sp|Q5E7G5|SYA_VIBF1 Alanine--tRNA ligase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=alaS PE=3 SV=1
Length = 859
Score = 600 bits (1548), Expect = e-170, Method: Compositional matrix adjust.
Identities = 364/913 (39%), Positives = 521/913 (57%), Gaps = 85/913 (9%)
Query: 62 KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
++R F FFE K H +SS +VP NDPTLLF NAGMNQ+K FLG+ N TR
Sbjct: 7 EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRN-----YTR 61
Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
A Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK +AI++AWE LT+ L
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLEL 121
Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
PADRL T + D+EA +IW K + PA R++ G DNFW+MGD
Sbjct: 122 PADRLLVTVY--------ETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173
Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
TGPCGPC+EI YD G R D IEIWN VF+QFNR +DG+++PLP
Sbjct: 174 TGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPKP 231
Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
VDTG+G ER+ +I+Q SNY+ D+F + I++A +G DD + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTL---IKEAAKV------IGYDDLS--NQSLR 280
Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
VVADHIR+ S+ I DG P NEGR YVLRRI+RRAVR+G++ L A+ +F LV + ++
Sbjct: 281 VVADHIRSCSYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGSYFYKLVGPLAEI 339
Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
MG ELK+++A + +++ EE +FG+TL +G+ +A +++G VL G+ F L+DT
Sbjct: 340 MGTAGEELKKQQALVEKVLKIEEENFGRTLERGMAILNEALDNLEGTVLDGETVFKLYDT 399
Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
YGFP DLT +A ER L +D +GF AM+E R+R+R A G D +A +
Sbjct: 400 YGFPADLTNDVARERELTIDEDGFEKAMEEQRQRAREA------GQFGTDYNAVIKVESE 453
Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
V DS + K+ + A++ E ++++ G++ ++L + FYAE GGQ D
Sbjct: 454 TVFHGYDS------TEAKASVVALFREGEEVDALSAGDDAILILDQTPFYAESGGQCGDA 507
Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
G I G F V + G + H G L EG S + + +VD RR I NH+ T
Sbjct: 508 GIITVETGKFVVTDTHKIGNAIGHHGKLVEGV--LSKADHAMAQVDETRRAAIILNHSAT 565
Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
H+L+ ALR+VLG+HV QKGS+V E LRFDFSH + V E LR++E IVN+QI+ +
Sbjct: 566 HLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIE 625
Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
+ + AK G A+FGE Y D VRV+++G S ELCGG H
Sbjct: 626 TDLMDIDAAKE-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCGGIH 668
Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC-SLEKEVDDASKIEGSLLE 827
S+T + F + SE GIA GIRRI AVT A A EA + +K++++A+ + LE
Sbjct: 669 ASSTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQKAADKKLNEAAS-KAKQLE 727
Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
K ++++ + K+A + + E A G +++++ G + A+R V ++
Sbjct: 728 K-EIQQLKDKLASQESASLINKVQEIA------GTKVLVAQLD-GAENKALRGMVDELKN 779
Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
Q G +++ + + K + AGV + D Q++ E + Q + G+ G G+ +A
Sbjct: 780 QIGSGIIMLG-NVSEGKVGLIAGVTK--DLIGQVKAGELVNMVAQQVGGKGG-GRPDMAQ 835
Query: 948 GQGTDAAQVTPAM 960
GTDA + A+
Sbjct: 836 AGGTDAEALPNAL 848
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 368,106,309
Number of Sequences: 539616
Number of extensions: 16349689
Number of successful extensions: 52313
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 44045
Number of HSP's gapped (non-prelim): 1298
length of query: 972
length of database: 191,569,459
effective HSP length: 127
effective length of query: 845
effective length of database: 123,038,227
effective search space: 103967301815
effective search space used: 103967301815
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)