BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002077
(972 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60177|YG42_SCHPO Uncharacterized ATP-dependent helicase C23E6.02
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC23E6.02 PE=3 SV=1
Length = 1040
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 238/776 (30%), Positives = 361/776 (46%), Gaps = 175/776 (22%)
Query: 257 LNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIAL 316
+N P + P GL+ L++HQK L W+ + E S GGILADD GLGKT+ +AL
Sbjct: 373 VNDPTIREGTPAGLIPT-LMEHQKEGLMWLKRLEESSKK--GGILADDMGLGKTVQALAL 429
Query: 317 IQMQRSLQSKS-KTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTST 375
+ + R +SKS KT ++ I PV
Sbjct: 430 L-VTRPPESKSVKTTLI--------------------------------ITPV------- 449
Query: 376 RSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVE-LAKYD 434
S+L+QW E+ K+ +V I+HG S+ E L YD
Sbjct: 450 ------------------SLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMSYD 491
Query: 435 VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKG 494
+VLTTY+++ E + + D+ D N KK ++
Sbjct: 492 IVLTTYNVIAYEFKNKMAYDKSIED---------------NAPIKKFEHL---------- 526
Query: 495 NVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAK-------------- 540
P + W+RV+LDEAQTIKN T AR CC L +
Sbjct: 527 -----------PFFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGV 575
Query: 541 ---RSTIK------------------IPISR--NSLHGYKKLQAVLRAIMLRRTKGTFID 577
S IK IP+S N+ K+ + +L+A++LRRTK T ID
Sbjct: 576 EEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAPMKRFRGLLKAVLLRRTKNTKID 635
Query: 578 GQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLR 637
G+PI+ LPPKT ++ D S E FY L+S + + + + GT+ +Y ++L++LLR
Sbjct: 636 GKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLR 695
Query: 638 LRQACDHPLLV--KEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAI-CCVCSD-PP 693
LRQAC HP L+ +E D + + + + + ++RL+ + C +C D
Sbjct: 696 LRQACCHPWLIVAREAAVDDNDSFQAK-NRAIYNQIYPEAVNRLKLIETLQCSLCMDVVA 754
Query: 694 EDSVVTMCGHVFCYQCASEYITGDDNMCP-------APRCK--------EQLGADVVFSK 738
E ++ CGH C +C + IT ++M +P+C E+L + +F +
Sbjct: 755 ELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRR 814
Query: 739 TTLKNCVSDDGGGSPTD--SPFADK--SGILDNEYISSKIRTVLDILHTQCELNTKCSIV 794
+ + D T+ S K S IL+N + KI T D H T + +
Sbjct: 815 YSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFT--DPKHW-----TTSTKI 867
Query: 795 EIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLP 854
E N + K P + K ++FSQ+ L+L Q I+Y G +S
Sbjct: 868 E----KALNAVKEIIKKQPTD---KILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTA 920
Query: 855 ARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIG 914
R++A+ +F D + V+L+SLKAGN+GLN+ A+HVI+LD +WNP E+QAVDRAHRIG
Sbjct: 921 ERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIG 980
Query: 915 QTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
Q +PV + R+ +T+E+R+L LQD KR+++ SA GE +G SRL ++L +LF
Sbjct: 981 QDKPVNILRIVTNNTIEERVLALQDRKRELIDSALGE-KGLREISRLNTKELSFLF 1035
>sp|Q9FIY7|SM3L3_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like 3 OS=Arabidopsis
thaliana GN=At5g43530 PE=3 SV=1
Length = 1277
Score = 296 bits (758), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 226/727 (31%), Positives = 334/727 (45%), Gaps = 186/727 (25%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD GLGKT+ IALI + GN + E + + D NA K
Sbjct: 682 GGILADAMGLGKTVMTIALILARPGR---------GNPENEDVLVAD----VNADKRNRK 728
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKV-PDKAALSVL 416
E + + + GTL++CP ++L QW ELE PD +SVL
Sbjct: 729 EIH---------------MALTTVKAKGGTLIICPMALLSQWKDELETHSKPD--TVSVL 771
Query: 417 IYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNK 476
+Y+GG RT D +A +DVVLTTY ++T+
Sbjct: 772 VYYGGDRTHDAKAIASHDVVLTTYGVLTS------------------------------- 800
Query: 477 KRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARAC-- 534
K ++ +SI ++ W+R+VLDEA TIK+ +TQ A+A
Sbjct: 801 --------------AYKQDMANSI------FHRIDWYRIVLDEAHTIKSWKTQAAKATFE 840
Query: 535 ---------------------------------CSLRAKRSTIKIPISRNSLHGYKKLQA 561
C+ I+ P G K ++A
Sbjct: 841 LSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKA 900
Query: 562 VLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFAD 620
+LR +MLRRTK T +G I+ LPP + + + + S+ E FY L S +F F
Sbjct: 901 ILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVA 960
Query: 621 AGTVNQNYANILLMLLRLRQACDHPLLV------KEY-DFDSVGK---------ISGEMA 664
G V NYANIL +LLRLRQ C+HP LV ++Y D DS+ + +S
Sbjct: 961 QGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAP 1020
Query: 665 KRLPRDMLIDLLSRLETSSAICCVCSDPPEDSVVTMCGHVFCYQC-ASEYITGDDNMCPA 723
R + +I L + +S C +C + +D V+T C H C +C + + + +CP
Sbjct: 1021 SRAYIEEVIQDLR--DGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPI 1078
Query: 724 PRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHT 783
R + +T L +C PTDS F + ++ N SSK+ +L L
Sbjct: 1079 CR--------TILKRTELISC--------PTDSIF--RVDVVKNWKESSKVSELLKCLEK 1120
Query: 784 QCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQ 843
+GS KSIVFSQWT LDL+E L + +
Sbjct: 1121 ----------------IKKSGSGE-----------KSIVFSQWTSFLDLLEIPLRRRGFE 1153
Query: 844 YRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTE 903
+ R DG ++ R++ +K+FN ++ T++LMSLKAG +GLN+ AAS V L+D WWNP E
Sbjct: 1154 FLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVE 1213
Query: 904 DQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTV 963
+QA+ R HRIGQ R V V R ++DTVE+R+ ++Q K++M+A A +++ ++RL
Sbjct: 1214 EQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALTDEE--VRSARL-- 1269
Query: 964 EDLRYLF 970
E+L+ LF
Sbjct: 1270 EELKMLF 1276
>sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like 2 OS=Arabidopsis
thaliana GN=At5g22750 PE=2 SV=1
Length = 1029
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 225/734 (30%), Positives = 340/734 (46%), Gaps = 180/734 (24%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD GLGKT+ I+L+ + S ++ S + N + DKV
Sbjct: 414 GGILADAMGLGKTVMTISLL-LAHSWKAASTGFLCPNYEG----------------DKVI 456
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRR-------PAAGTLVVCPASVLRQWARELEDKVPDK 410
+ DD+ P +T F +R G L+VCP ++L QW E+E
Sbjct: 457 SSS-VDDLTSPPVKATKFLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHA-KP 514
Query: 411 AALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSS 470
+LSV +++G SR KD L++ DVV+TTY ++T+E ++ S D E
Sbjct: 515 GSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEFSQENSADHE-------------- 560
Query: 471 EFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQV 530
+ V WFR+VLDEA TIKN ++Q+
Sbjct: 561 -----------------------------------GIYAVRWFRIVLDEAHTIKNSKSQI 585
Query: 531 ARACCSLRAKR-----------------------------------STIKIPISRNSLHG 555
+ A +L A R ++ P G
Sbjct: 586 SLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERG 645
Query: 556 YKKLQAVLRAIMLRRTKG-TFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKK 614
K +Q++L+ IMLRRTK T +G+PI+ LPP + + S+ E FY L S K
Sbjct: 646 LKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVK 705
Query: 615 FKAFADAGTVNQNYANILLMLLRLRQACDHPLLV------KEY-DFDSV------GKISG 661
F F + G V NYA+IL +LLRLRQ CDHP LV EY D + + GK SG
Sbjct: 706 FDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSG 765
Query: 662 --EMAKRLPRDMLI-DLLSRL-ETSSAICCVCSDPPEDSVVTMCGHVFCYQCA-SEYITG 716
K +P + + +++ L + C +C + ED+V+T C H C +C + +
Sbjct: 766 LEREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNS 825
Query: 717 DDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRT 776
+CP C+ + + + +PT+S F + + N SSKI
Sbjct: 826 TSGLCPV--CRNTVSKQELIT--------------APTESRF--QVDVEKNWVESSKITA 867
Query: 777 VLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENS 836
+L+ +L G S + KSI+FSQWT LDL++
Sbjct: 868 LLE------------------ELEGLRSSGS-----------KSILFSQWTAFLDLLQIP 898
Query: 837 LNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDL 896
L+++ + RLDGT+S R++ +K+F+ D I V+LMSLKAG +G+N+ AAS+ ++D
Sbjct: 899 LSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDP 958
Query: 897 WWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGG 956
WWNP E+QAV R HRIGQT+ V + R ++ TVE+R+ +Q K++M++ A DQ
Sbjct: 959 WWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGAL-TDQEVR 1017
Query: 957 TASRLTVEDLRYLF 970
+A +E+L+ LF
Sbjct: 1018 SAR---IEELKMLF 1028
>sp|O13762|YF2C_SCHPO Uncharacterized ATP-dependent helicase C17A2.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC17A2.12 PE=3 SV=1
Length = 897
Score = 269 bits (687), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 229/777 (29%), Positives = 335/777 (43%), Gaps = 183/777 (23%)
Query: 259 QPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQ 318
Q K E GLL V+LL HQ AWM E S C GG++ADD GLGKTI IAL
Sbjct: 235 QLKNEQVQSAGLL-VSLLPHQVEGHAWMESMEQSS-KC-GGVMADDMGLGKTIQTIAL-- 289
Query: 319 MQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRSF 378
L QK++ D +++T
Sbjct: 290 -------------LLTQKSQ---------------DPLRKTN------------------ 303
Query: 379 SRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTK-DPVELAKYDVVL 437
L+V ++L QWA EL KV LSV I+HG ++ D EL++YDVVL
Sbjct: 304 ---------LIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYELSQYDVVL 354
Query: 438 TTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVN 497
TTYS++ E+ K+ N
Sbjct: 355 TTYSMLAYEM--------------------------------------KQNDAFNNNNPA 376
Query: 498 SSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKR---------------- 541
++ L + W+R+VLDEA TI+N T A+ C L AK
Sbjct: 377 TATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEF 436
Query: 542 ---------------STIKIPISRNSLHGY---------KKLQAVLRAIMLRRTKGTFID 577
S ISR L Y K+L+ +L + + RRTK T ++
Sbjct: 437 YSLLKFLRIKPYCVWSLFAKDISR-PLKSYRADIVEAALKRLRILLASTVFRRTKETRVN 495
Query: 578 GQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLR 637
PI+NLPPKTI V+ EE A Y + S + + + Y +L+ LLR
Sbjct: 496 NLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLVSLLR 555
Query: 638 LRQACDHPLLVKEYDFDSVGKI-SGEMAKRLPRDMLIDLLSRLETSSAI-CCVCSDPPED 695
LRQ C HP LVK D+ +I E + + + + R+ T C VC DP
Sbjct: 556 LRQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLDPCLA 615
Query: 696 SVVTM-CGHVFCYQCASEYI-------TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSD 747
V + CGH C +C S + + + P C+ + D + T L+
Sbjct: 616 PVFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQ----- 670
Query: 748 DGGGSPTDS----PFADKSGILDNEYISSKIRTVLDILHTQ------CELNTKCSIVE-- 795
P +S + E I + +D + T+ E + + +
Sbjct: 671 -AIHGPLNSLKQLELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWKSSSKLNQAR 729
Query: 796 --IHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSL 853
I D+ GS + + +V+SQ+++ L LV + L I++ R DGTMS
Sbjct: 730 QTILDIIGSKRNEKI------------LVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSA 777
Query: 854 PARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRI 913
R +++ FN D+++ VML+SLKAG++GLN+ A+HVIL + ++NP+ EDQA+DR HR+
Sbjct: 778 NQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRL 837
Query: 914 GQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
GQ +PVTV R +DT+E+RI+ +Q KR++V A ++ SRL E+L YLF
Sbjct: 838 GQQKPVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNENNP-LSRLDKEELLYLF 893
>sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
OS=Arabidopsis thaliana GN=At5g05130 PE=2 SV=1
Length = 881
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 226/804 (28%), Positives = 340/804 (42%), Gaps = 182/804 (22%)
Query: 218 SVSMTQFGGPSDLAYRS--GSADERAVGGDERLIYQAALEDLNQPKVEATLPDGLLSVNL 275
S S T FG + + G+ D+R+V +L+ + L V A P ++ L
Sbjct: 174 SESDTSFGLSEAVVVKEQMGNGDKRSVDKIFKLVDENV--KLMGKLVAAEPPREVIKSEL 231
Query: 276 LKHQKIALAWMLQKETRS-------------LHCL-------------GGILADDQGLGK 309
HQK L W+L +E L+ L GG+ ADD GLGK
Sbjct: 232 FAHQKEGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGK 291
Query: 310 TISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVP 369
T+++++LI R + + T E L+ + D ++ ES K +
Sbjct: 292 TLTLLSLIAFDRYGNASTSTPT-----EEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLK 346
Query: 370 EVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDK-VPDKAALSVLIYHGGSRTKDPV 428
+ S++ TL+VCP SV+ W +LE+ VP L V +YHGG RT D
Sbjct: 347 TDDVVGMNVSQK----TTLIVCPPSVISAWITQLEEHTVP--GILKVYMYHGGERTDDVN 400
Query: 429 ELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRG 488
EL KYD+VLTTY + +V+E D
Sbjct: 401 ELMKYDIVLTTYGTL--------AVEESWED----------------------------- 423
Query: 489 KKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKR------- 541
P+ K+ W R++LDEA TIKN Q +R C L+A R
Sbjct: 424 ----------------SPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGT 467
Query: 542 ----------------------------STIKIPISRNSLHGYKKLQAVLRAIMLRRTKG 573
S I+ P+ + + G +LQ ++ I LRRTK
Sbjct: 468 PIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKE 527
Query: 574 TFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILL 633
+ +I LPPKT+ V+ S EE Y +E ++ + + G++ +NY+ +L
Sbjct: 528 -----KSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLS 582
Query: 634 MLLRLRQACDHPLLVKEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAI-CCVCSDP 692
++LRLRQ CD L S E P ++L L++ L+ C +C P
Sbjct: 583 IILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKP-ELLQKLVAALQDGEDFDCPICISP 641
Query: 693 PEDSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGS 752
P + ++T C H+FC C + + +CP C+ L +++ L N S
Sbjct: 642 PTNIIITRCAHIFCRACILQTLQRSKPLCPL--CRGSL------TQSDLYNAPPPPPDSS 693
Query: 753 PTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKS 812
TD A S SSK+ +L +L + N N S V
Sbjct: 694 NTDGEDAKSS------TKSSKVSALLSLLMASRQEN-------------PNTKSVV---- 730
Query: 813 PIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREIT-- 870
FSQ+ +ML L+E L RLDG M++ R + + +F + E+T
Sbjct: 731 ----------FSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFG-NPELTGP 779
Query: 871 -VMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDT 929
V+L SLKA G+N+ AAS V L D WWNP E+QA+DR HRIGQ + V + R+ R++
Sbjct: 780 VVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNS 839
Query: 930 VEDRILKLQDDKRKMVASAFGEDQ 953
+E+R+L+LQ K+ + AF Q
Sbjct: 840 IEERVLELQQKKKNLANEAFKRRQ 863
>sp|P31244|RAD16_YEAST DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD16 PE=1 SV=1
Length = 790
Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 286/625 (45%), Gaps = 110/625 (17%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIV--- 443
+LVV P L QW E+E K L + IYHG SRT D +L YDVVLTTY+++
Sbjct: 233 SLVVAPTVALMQWKNEIEQHT--KGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESV 290
Query: 444 ----------TNEVPKQPSV-----------DEEEADEKNGETYGLSSEFSVNKKRKKIS 482
N + KQPSV DE + + +KR +S
Sbjct: 291 FRKQNYGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLS 350
Query: 483 NVSKRGKKGKKG------NVNSSIDYGCGPL--AKVGW-F--RVVLDEAQTIKNHRTQVA 531
+ + G+ N+N Y C A W F R+ D + T
Sbjct: 351 GTPLQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFF 410
Query: 532 RACCSLRAKRSTIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISL 591
++ ++ P L + +Q +L+ IMLRRTK D + LPP+ +++
Sbjct: 411 NHFMLKNIQKFGVEGP----GLESFNNIQTLLKNIMLRRTKVERADD---LGLPPRIVTV 463
Query: 592 TKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY 651
+ F++EE Y+ L +DS +K+ +F + G V NYANI ++ R+RQ DHP LV
Sbjct: 464 RRDFFNEEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDLV--- 520
Query: 652 DFDSVGKISGEMAKRL---PRDMLIDLLSRLETSSAICCVCSDPPEDSVVTMCGHVFCYQ 708
KRL P D + IC +C+D E+ + + C H FC
Sbjct: 521 ------------LKRLNNFPGD---------DIGVVICQLCNDEAEEPIESKCHHKFCRL 559
Query: 709 CASEYITG---DDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGIL 765
C EY+ ++N P C +G + S+ L+ D K I+
Sbjct: 560 CIKEYVESFMENNNKLTCPVC--HIGLSIDLSQPALE-----------VDLDSFKKQSIV 606
Query: 766 DNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQ 825
+S K ++ I + + E++ L + + IKSIVFSQ
Sbjct: 607 SRLNMSGKWQSSTKI---------EALVEELYKLRSNKRT------------IKSIVFSQ 645
Query: 826 WTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGNLGLNM 885
+T MLDLVE L + Q +L G+MS RD +K F + + V L+SLKAG + LN+
Sbjct: 646 FTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNL 705
Query: 886 VAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMV 945
AS V +LD WWNP+ E Q+ DR HRIGQ RPV +TR I D++E RI++LQ+ K M+
Sbjct: 706 CEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQEKKANMI 765
Query: 946 ASAFGEDQGGGTASRLTVEDLRYLF 970
+ +D+ SRLT DL++LF
Sbjct: 766 HATINQDEAA--ISRLTPADLQFLF 788
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 267 PDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
PDG+ ++ LL Q L W++ +E S++ GG+LAD+ G+GKTI IAL+
Sbjct: 177 PDGM-TIKLLPFQLEGLHWLISQE-ESIYA-GGVLADEMGMGKTIQTIALL 224
>sp|Q10332|YBMA_SCHPO Uncharacterized ATP-dependent helicase C582.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC582.10c PE=1 SV=1
Length = 830
Score = 256 bits (653), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 218/757 (28%), Positives = 319/757 (42%), Gaps = 218/757 (28%)
Query: 271 LSVNLLKHQKIALAWMLQKETRSLHCL-GGILADDQGLGKTISIIALIQMQRSLQSKSKT 329
+ + LL HQ L W+ +ET S GGILADD GLGKTI +IALI
Sbjct: 229 MHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSH--------- 279
Query: 330 EVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLV 389
P+P+ S +S TLV
Sbjct: 280 -------------------------------------PLPKKKHSIKS---------TLV 293
Query: 390 VCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPK 449
V P S+++QW E +V K+ L+ ++YHG SR K + +YDVV+TTY I+ +E
Sbjct: 294 VAPLSLIKQW----ESEVQTKSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSEWVS 349
Query: 450 QPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAK 509
+ G GK S + L
Sbjct: 350 HNTT----------------------------------GTDGKSPTEAKSYEKKKPSLFA 375
Query: 510 VGWFRVVLDEAQTIKNHRTQVARACCSLRA------------------------------ 539
W+R++LDEA TIKN ++ A ACC+L+
Sbjct: 376 FYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPF 435
Query: 540 -KRSTIKIPISRNSLHG-----YKKLQAVLRAIMLRRTKGTFIDGQP-------IINLPP 586
+S K IS G +K+L+ +L IMLRRTK T ++ + L
Sbjct: 436 NDQSVWKDQISLPLCQGEENLVFKRLRMLLSVIMLRRTK-TLLEANAGKDGTGGALKLSK 494
Query: 587 KTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPL 646
+ + F + E FY L + + F ++G + +NY NIL +LLRLRQAC+HP
Sbjct: 495 RLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHPQ 554
Query: 647 LVK---EYDFDSVGKISG-----EMAKRLPRDMLIDLLSRLETSS---AICCVC-SDPPE 694
+ E D D+ + G ++A D L +LL +E S + C +C ++ P
Sbjct: 555 SLNFQFEQDVDAFNALDGAANTNKLASDQDVDDLANLLETVEIGSRKKSFCTICMAELPP 614
Query: 695 DSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPT 754
D C C+ + KE D G P
Sbjct: 615 D-----FHEKKCKDCSRNF-------------KEL-----------------DKGIQDPN 639
Query: 755 DSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPI 814
D Y SSKIR +L IL S+ E + +
Sbjct: 640 DKTL----------YKSSKIREILKIL----------SLDEQEE------------DDTV 667
Query: 815 EGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLM 874
G K+I+FSQ+T LD+++ L + I + R DG M+ AR++++ +D V+L
Sbjct: 668 RGLRKTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLC 727
Query: 875 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 934
SLK G LGLN+ AS VIL D+WWNP E+QA+DR HRIGQ R V V +L + +T+E++I
Sbjct: 728 SLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKI 787
Query: 935 LKLQDDKRKMVASAFGEDQGG-GTASRLTVEDLRYLF 970
++LQ+ KR + A G+ + T+ +LT+ DL +LF
Sbjct: 788 VELQNLKRDLAKQALGDGKKSVFTSKKLTLNDLLFLF 824
>sp|Q08562|ULS1_YEAST ATP-dependent helicase ULS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ULS1 PE=1 SV=1
Length = 1619
Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 227/789 (28%), Positives = 348/789 (44%), Gaps = 200/789 (25%)
Query: 251 QAALEDLNQPKV----EATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQG 306
+A LE++ Q + EA P+ + +VNLLKHQ++ L W+LQ E + GG+LADD G
Sbjct: 916 RALLENVKQSESIIDGEALTPEDM-TVNLLKHQRLGLHWLLQVENSAKK--GGLLADDMG 972
Query: 307 LGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIK 366
LGKTI IAL+ RS +SK KT ++ +
Sbjct: 973 LGKTIQAIALMLANRSEESKCKTNLI--------------------------------VA 1000
Query: 367 PVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIY--HGGSRT 424
PV SVLR W ELE KV +A + I+ G +
Sbjct: 1001 PV-------------------------SVLRVWKGELETKVKKRAKFTTFIFGGSGNGKV 1035
Query: 425 KDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNV 484
K +LA+YD VL +Y + NE K ++ D + + + ++N R K SN
Sbjct: 1036 KHWRDLARYDAVLVSYQTLANEFKKHWP---KKLDGEQNQLPAVPHIQALN--RLKTSNE 1090
Query: 485 SKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRA----- 539
Y ++R++LDE Q IKN T+ ++ACC++
Sbjct: 1091 Y----------------YSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWV 1134
Query: 540 --------------------------KRSTIKIPI----SRNSLHGY---------KKLQ 560
K K+ I RN + Y +K++
Sbjct: 1135 LSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVR 1194
Query: 561 AVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFAD 620
+L AIMLRR+K IDG+P++ LPPK + + + EE FY LES + K +
Sbjct: 1195 VLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALESKNQALAKKLLN 1254
Query: 621 AGTVNQNYANILLMLLRLRQACDHPLLV---------------KEYDFD------SVGKI 659
T +Y+++L +LLRLRQAC H LV K ++ D + +
Sbjct: 1255 NSTRG-SYSSVLTLLLRLRQACCHSELVVMGEKKAEGTKVANGKSFEDDWLRLYYKITHM 1313
Query: 660 SGEMAKRLPRDMLIDLLSRLETSSAICCVCS---DPPEDSVVTMCGHVFCYQCASEYITG 716
SGE ++ M +S C C +P SV+T CGH+ C C +I
Sbjct: 1314 SGEAQAQVITSM----------NSMTCFWCMEQLEPEAMSVLTGCGHLICDTCIEPFIE- 1362
Query: 717 DDNMCPAPRCKEQLGADVVFSK-----TTLKNCVSDDGGGSPTDSPFADKSGILDNEYIS 771
+ +M P + K + GA + K T K+ VS + F ++ L EY+S
Sbjct: 1363 ESSMLPQAK-KTKGGAFAIPCKDCQRLTNEKDIVSHKLYDQVINQGFTEED--LHAEYLS 1419
Query: 772 S----KIRTV------LDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSI 821
KI+ + L ++ +++ V +S E K I
Sbjct: 1420 EMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ-----------RVFDESATE---KII 1465
Query: 822 VFSQWTRMLDLVENSL-NQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+FSQ+T +++E+ L N+ Y + G+M+ R + +F D E ++L+S+KAGN
Sbjct: 1466 IFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEKRILLISMKAGN 1525
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDD 940
GL + A+HV+++D +WNP E+QA DR +RI QT+ V V +L I+D+VEDRI +LQ
Sbjct: 1526 SGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQKR 1585
Query: 941 KRKMVASAF 949
K++MV SA
Sbjct: 1586 KKEMVDSAM 1594
>sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1
SV=2
Length = 1009
Score = 253 bits (646), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 277/621 (44%), Gaps = 138/621 (22%)
Query: 371 VSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVEL 430
V S ++ RP TL++CP SVL W + + L+ +Y+G R ++P L
Sbjct: 463 VEGSKKTDVEERPRT-TLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALL 521
Query: 431 AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKK 490
+K D+VLTTY+I+T++
Sbjct: 522 SKQDIVLTTYNILTHDY------------------------------------------- 538
Query: 491 GKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRS-------- 542
G KG+ PL + W RV+LDE I+N Q +A L ++R
Sbjct: 539 GTKGD---------SPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPI 589
Query: 543 ---------------------------TIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTF 575
TI+ P++ G ++LQ++++ I LRRTK +
Sbjct: 590 QNSLKDLWSLLSFLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSK 649
Query: 576 IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLML 635
I G+P++ LP + + + + S EE Y+ ++++ + + GTV +YA++L +L
Sbjct: 650 IKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLL 709
Query: 636 LRLRQACDHPLLVKEY---DFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAICCVCSDP 692
LRLRQ C H L+ + S E+ K+L R M + L S S C +C D
Sbjct: 710 LRLRQICCHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSS---GSDEECAICLDS 766
Query: 693 PEDSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGS 752
V+T C HVFC C + I + P C+ + D L C
Sbjct: 767 LTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHED------NLLEC-------- 812
Query: 753 PTDSPFADKSGILDNEYI-SSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSK 811
P + D D E+ SSKI ++ L DL N +
Sbjct: 813 PPEELARDSEKKSDMEWTSSSKINALMHAL---------------TDLRKKNPN------ 851
Query: 812 SPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDR-EI 869
IKS+V SQ+T L L+E L + RLDG+M+ R +++ F NT+
Sbjct: 852 ------IKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSP 905
Query: 870 TVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDT 929
T+ML+SLKAG +GLN+ AAS V L+D WNP EDQ DR HR+GQ + V +T+ ++D+
Sbjct: 906 TIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDS 965
Query: 930 VEDRILKLQDDKRKMVASAFG 950
VE+ +LK+Q+ KR++ A AFG
Sbjct: 966 VEENMLKIQNKKRELAAGAFG 986
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 27/95 (28%)
Query: 250 YQAALEDLNQP-KVEATLPDGLLSVNLLKHQKIALAWMLQKET----------------- 291
+ EDL + K P + LL HQK ALAWM+ +E
Sbjct: 214 FDKLFEDLKEDDKTHEMEPAEAIETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYN 273
Query: 292 ---------RSLHCLGGILADDQGLGKTISIIALI 317
R + GGILADD GLGKT++ IA+I
Sbjct: 274 TITNFSEKDRPENVHGGILADDMGLGKTLTAIAVI 308
>sp|Q95216|HLTF_RABIT Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF
PE=1 SV=1
Length = 1005
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/626 (28%), Positives = 278/626 (44%), Gaps = 139/626 (22%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNE 446
TL++CP SVL W + + L+ +Y+G R +DP L+K D+VLTTY+I+T++
Sbjct: 475 TLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHD 534
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
G KG+ P
Sbjct: 535 Y-------------------------------------------GTKGD---------SP 542
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRS------------------------ 542
L + W RV+LDE I+N Q +A L A+R
Sbjct: 543 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 602
Query: 543 -----------TIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISL 591
TI+ P++ G ++LQ++++ I LRRTK + I G+P++ LP + + +
Sbjct: 603 KPFVDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERPVFI 662
Query: 592 TKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY 651
+ S EE Y+ ++S+ + + GTV +YA++L +LLRLRQ C H L+
Sbjct: 663 QHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLT-- 720
Query: 652 DFDSVGKISGEMAKRLPRDMLIDLLSRLET-----SSAICCVCSDPPEDSVVTMCGHVFC 706
++V SG P ++ L+ +++ S C +C D V+T C HVFC
Sbjct: 721 --NTVSS-SGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFC 777
Query: 707 YQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILD 766
C + I + P C+ + D L C P + D +
Sbjct: 778 KPCICQCIQNEQPHAKCPLCRNDIHGD------NLLEC--------PPEELACDSEKKSN 823
Query: 767 NEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQW 826
E+ SS + ++H +L TK IKS+V SQ+
Sbjct: 824 MEWTSSS--KINALMHALIDLRTK------------------------NPNIKSLVVSQF 857
Query: 827 TRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDR-EITVMLMSLKAGNLGLN 884
T L L+E L + RLDG+M+ R +++ F NT+ T+ML+SLKAG +GLN
Sbjct: 858 TTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLN 917
Query: 885 MVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKM 944
+ AAS V L+D WNP EDQ DR HR+GQ + V +T+ ++D+VE+ +LK+Q+ KR++
Sbjct: 918 LCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKREL 977
Query: 945 VASAFGEDQGGGTASRLTVEDLRYLF 970
A AFG + + + ++R L
Sbjct: 978 AAGAFGTKKNANEMKQAKINEIRTLI 1003
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 27/95 (28%)
Query: 250 YQAALEDLNQP-KVEATLPDGLLSVNLLKHQKIALAWMLQKE-TRSL------------- 294
+ EDL + K + P + LL HQK ALAWM+ +E +R L
Sbjct: 214 FDKLFEDLKEDDKTQEMEPAEAVETPLLPHQKQALAWMVSRENSRELPPFWELRNDLYYN 273
Query: 295 ------------HCLGGILADDQGLGKTISIIALI 317
+ GGILADD GLGKT++ IA+I
Sbjct: 274 TITNFSEKDQPENVHGGILADDMGLGKTLTAIAVI 308
>sp|Q4WVM1|RAD5_ASPFU DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2
Length = 1245
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 211/792 (26%), Positives = 336/792 (42%), Gaps = 219/792 (27%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++LI R N+ ++ +
Sbjct: 556 HCLGGILADEMGLGKTIEMLSLIHSHR-------------------NVSPSRQGPSSSTE 596
Query: 355 KVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALS 414
V+ S I P P TLVV P S+L QW E K ++ +
Sbjct: 597 LVRMPSSSSAILPAPNT---------------TLVVAPTSLLSQWESEAM-KASEQGTMK 640
Query: 415 VLIYHGGSRTKDPVEL------AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGL 468
VL+Y+G ++ + EL A ++++T+Y +V +E
Sbjct: 641 VLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSE---------------------- 678
Query: 469 SSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRT 528
++ N N+ G L V +FRV+LDEA IKN R+
Sbjct: 679 -------------------SRQLAMFNSNTQ-----GGLFSVDFFRVILDEAHVIKNRRS 714
Query: 529 QVARACCSLRAK-----------------------------------RSTIKIPI-SRNS 552
+ ARAC LRA ++ I +P S++
Sbjct: 715 KTARACYELRATHRWVLTGTPIVNRLEDLFSLVRFLQVEPWNNFSFWKTFITVPFESKDY 774
Query: 553 LHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 611
+ +Q VL ++LRRTK +G+P++ LP +TI + +V+ S++E Y + + +
Sbjct: 775 VRALNVVQTVLEPLVLRRTKTMKTPEGEPLVPLPRRTIDIVEVELSEQEREIYDYIFTRA 834
Query: 612 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY-------------------- 651
+ F +AGT+ ++++ I +LRLRQ C HP+L +
Sbjct: 835 KRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRNKTIVADEEDAAATADAANELK 894
Query: 652 -DFDS---VGKISGEM-------AKRLPRDMLIDLLSRLET-SSAICCVCSDPPE-DSVV 698
D D + + S M A+ L +++T SS C +CS+ P D V
Sbjct: 895 DDMDLQELIDRFSASMENADTAEAQDPSAKFTTHALRQIQTESSGECPICSEEPMIDPAV 954
Query: 699 TMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPF 758
T C H C +C +YI + PRC V S+ + +PT++
Sbjct: 955 TACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAP--VTSRDIFQVIRHQSPSSTPTETDL 1012
Query: 759 ADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSA-----VHSKSP 813
Y S+ + + S+ IH L+ S +SA ++ +
Sbjct: 1013 ----------YSSTPA--------SSPHPAPRISLRRIHPLSPSAHTSAKIHALINHLNR 1054
Query: 814 IEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFN--------- 864
+ KS+VFSQ+T LDL+ L + I Y RLDGTM AR + +FN
Sbjct: 1055 VPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKARAEVLAEFNRTETFHQEE 1114
Query: 865 ---------------------TDREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTE 903
+ + V+L+SL+AG +GLN+ AAS+V ++D WW+ E
Sbjct: 1115 IDEDEGPDTPRVRISSKNSRSSPKSPAVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIE 1174
Query: 904 DQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKM-VASAFGEDQGGGTAS--- 959
QA+DR HR+GQ R V+VTR ++D++E R+L++Q+ RKM +A + G GG +
Sbjct: 1175 AQAIDRVHRMGQLRDVSVTRFIVKDSIEGRMLRVQE--RKMNIAGSLGLRVGGDGSEDEK 1232
Query: 960 -RLTVEDLRYLF 970
+ +E+L+ LF
Sbjct: 1233 RKERIEELKLLF 1244
>sp|P0CQ67|RAD5_CRYNB DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RAD5 PE=3 SV=1
Length = 1198
Score = 246 bits (627), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 212/755 (28%), Positives = 329/755 (43%), Gaps = 167/755 (22%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD G+GKT + +LI R + E +Q + + + D++ + + K K
Sbjct: 517 GGILADAMGMGKTCMMASLIHTNREEKPAGNLE---SQTRDGVEGEIDEEPASKRI-KFK 572
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
+ S+ + VP + SF R TLVVCP S+ QW EL K+ + +++ +
Sbjct: 573 QVTLSNQWRAVP-TAPKVESFPR-----ATLVVCPVSLAAQWHDELR-KMSQQGSINSYV 625
Query: 418 YHGGSRTKDPVELA-----KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEF 472
++GG R LA + DV++T+Y +T+E K +
Sbjct: 626 WYGGDRVDIEALLAGDGKERVDVIVTSYGTLTSEYQK----------------------W 663
Query: 473 SVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVAR 532
K R +Y G L + R+VLDEA I+N V++
Sbjct: 664 LRTKDRP---------------------NYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSK 702
Query: 533 ACCSLRAKR-----------------------------------STIKIPISRNSLHGYK 557
AC L+ +R S + +P
Sbjct: 703 ACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNYSFFRSFVTVPFLNQDHKALN 762
Query: 558 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 616
+Q +L + +LRR K DG+ I++LPPKT+ + + FS+ E YK LE + K+F
Sbjct: 763 VVQYILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFI 822
Query: 617 AFADAGTVNQNYANILLMLLRLRQACDHPLLV---------------------KEYDF-D 654
G NY +IL ML++LRQ DHPLLV E + D
Sbjct: 823 ELDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRD 882
Query: 655 SVGKISGEMAKRLPRDM----LIDLLSRL--ETSSAICCVCSDPPEDSVVTMCGHVFCYQ 708
+ +G + P D+ +L L + + IC +CS+ D V+ C H C
Sbjct: 883 MIAMYAGGIRAETPDDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQD 942
Query: 709 CASEYI-TGDDN--MCPAPRCKE---QLGADV--VFSKTTLKNCVSD--DGGGSPTDSPF 758
C E+I T +D + P C + +L AD+ V + N ++D GG P
Sbjct: 943 CIVEWIGTCEDQNKIASCPSCGKGPIKL-ADLRSVQRRHKRVNPITDAYPGGRDPNSKSS 1001
Query: 759 ADKSGILD--NEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEG 816
D + L + S+K+R +L L + + K
Sbjct: 1002 NDTTVTLGKVDLVTSTKLRALLRQLEEIRQEDPKA------------------------- 1036
Query: 817 PIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTD-REITVMLMS 875
K++VFSQ+T LDL+E +L + I++ R DGTMS R +++F E ++L+S
Sbjct: 1037 --KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLIS 1094
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
LKAG +GLN+ A++V L+D WWN E QA+DR HR+GQ +PV VTR I+ TVE RI+
Sbjct: 1095 LKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIM 1154
Query: 936 KLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
K+Q K +V ++ G T+ D++ +F
Sbjct: 1155 KIQRSKTALVNASLS---NGAKTKETTLADIKKIF 1186
>sp|P36607|RAD5_SCHPO DNA repair protein rad5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad8 PE=1 SV=1
Length = 1133
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 206/734 (28%), Positives = 316/734 (43%), Gaps = 187/734 (25%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTI +++LI + + E + K
Sbjct: 524 GGILADEMGLGKTIEVLSLIHSRPCFSTDEIPEAFRHSK--------------------- 562
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
P + ++R+ TLVV P S+L QW E KV +I
Sbjct: 563 -----------PSLPVASRT---------TLVVAPMSLLDQWHSE-ACKVSQGTKFRSMI 601
Query: 418 YHGGSRTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYG-LSSEFSVNK 476
Y+G + P++L K +D A +YG L SEFS
Sbjct: 602 YYGSEK---PLDL------------------KSCVIDTSTAPLIIITSYGVLLSEFS--- 637
Query: 477 KRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARAC-- 534
+ G L V WFRVVLDE I+N ++ A+AC
Sbjct: 638 --------QQSHSSG---------------LFSVHWFRVVLDEGHNIRNRESKTAKACHS 674
Query: 535 ---------------------------------CSLRAKRSTIKIPI-SRNSLHGYKKLQ 560
C+ ++ + +P S++ L +Q
Sbjct: 675 ISSQNRWVITGTPIVNKLDDLYSLIKFMRYEPWCNYTYWQTFVSLPYQSKDVLKALNVVQ 734
Query: 561 AVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFA 619
++L ++LRRTK T +G I+ LPPKT+ + +DFS E Y L + + A
Sbjct: 735 SILEFLVLRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANI 794
Query: 620 DAGTVNQNYANILLMLLRLRQACDHPLLVK------------EYDFDSVGKISGEMA--- 664
AGT+ +NY IL +LLRLRQAC P+L+ E+ + + +
Sbjct: 795 VAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDDFEFSVEQFNSLINQFVVTG 854
Query: 665 KRLPRDML-IDLLSRLE---TSSAICCVCSDPPEDSVVTMCGHVFCYQCASEYITGDD-- 718
K +P D+L ID L E T ICC ++P ++ ++ C H C C SE+I
Sbjct: 855 KPIPSDILKIDTLKSFEALITECPICC--NEPIQNPLLLNCKHACCGDCLSEHIQYQKRR 912
Query: 719 NMCP--APRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRT 776
N+ P C++ V+ +KN G+ +S +L E + K
Sbjct: 913 NIIPPLCHTCRQPFNEQDVYKPFFVKN------NGT--------QSTLLVGEEVKWKYWN 958
Query: 777 VLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENS 836
L V+++ L G HS P K ++FSQ+T LD++ +
Sbjct: 959 RL-------------QSVKLNGLLG-QLRQLTHSSEPE----KVVIFSQFTTFLDIIADV 1000
Query: 837 LNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDL 896
L + Y R DGTMS R A++ F D ++ V+++SLKAG +GLN+ A+HV ++D
Sbjct: 1001 LESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIMDP 1060
Query: 897 WWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGG 956
WW+ + E QA+DR HR+GQ +PV VTR +RDTVE+R+LK+Q +++ + G +G
Sbjct: 1061 WWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLKIQ-ERKNFITGTLGMSEGKQ 1119
Query: 957 TASRLTVEDLRYLF 970
++ED++ LF
Sbjct: 1120 QVQ--SIEDIKMLF 1131
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1
SV=1
Length = 1003
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 269/608 (44%), Gaps = 141/608 (23%)
Query: 386 GTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTN 445
TL++CP SVL W + V + L+ +Y+G R +D L+K D++LT
Sbjct: 471 ATLIICPLSVLSNWIDQFGQHVKSEVHLNFYVYYGPDRIRDSAWLSKQDIILT------- 523
Query: 446 EVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGC- 504
TY + + DYG
Sbjct: 524 -------------------TYNILTH-----------------------------DYGTK 535
Query: 505 --GPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKRS-------------------- 542
PL + W RV+LDE I+N Q +A L A+R
Sbjct: 536 DDSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLS 595
Query: 543 ---------------TIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPK 587
I+ P++ G ++LQ++++ I LRRTK + I G+P++ LP +
Sbjct: 596 FLKLKPFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPER 655
Query: 588 TISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLL 647
+ + + S+EE Y+ ++++ + GTV +YA++L +LLRLRQ C H L
Sbjct: 656 KVFIQHITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHL 715
Query: 648 VKEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSA--ICCVCSDPPEDSVVTMCGHVF 705
+ S G + + L R MLI+ + + +S + C +C D V+T C HVF
Sbjct: 716 LTN-GMSSSGPSRSDTPEEL-RKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVF 773
Query: 706 CYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDD-GGGSPTDSPFADKSGI 764
C C + I + P C+ ++ D L C ++ S +S KS
Sbjct: 774 CKPCICQVIHSEQPHAKCPLCRNEIHGD------NLLECPPEELACDSDKESSMEWKS-- 825
Query: 765 LDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFS 824
SSKI ++H EL TK + IKS+V S
Sbjct: 826 ------SSKINA---LMHALIELRTK------------------------DPNIKSLVVS 852
Query: 825 QWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDF-NTDR-EITVMLMSLKAGNLG 882
Q+T L L+E L + RLDG+M+ R +++ F NT+ T+ML+SLKAG +G
Sbjct: 853 QFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVG 912
Query: 883 LNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKR 942
LN+ AAS V L+D WNP EDQ DR HR+GQ + V +T+ ++D+VE+ +LK+Q+ KR
Sbjct: 913 LNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKR 972
Query: 943 KMVASAFG 950
+ A AFG
Sbjct: 973 DLAAGAFG 980
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 65/166 (39%), Gaps = 42/166 (25%)
Query: 250 YQAALEDLNQPKVEATL-PDGLLSVNLLKHQKIALAWMLQKET----------------- 291
+ EDL + + P + LL HQK ALAWM+ +E
Sbjct: 214 FDKLFEDLKEDDRTVEMEPAEAIETPLLPHQKQALAWMIARENSKELPPFWEQRNDLYYN 273
Query: 292 ---------RSLHCLGGILADDQGLGKTISIIALIQMQ----RSLQSK-SKTEVLGNQ-- 335
R + GGILADD GLGKT++ IA+I R L SK K G +
Sbjct: 274 TITNFSVKERPENVHGGILADDMGLGKTLTAIAVILTNFDDGRPLLSKRGKKNHPGKEYK 333
Query: 336 ----KTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRS 377
K N+D +D G + GE I PE S+ T S
Sbjct: 334 DETIKRRGSNMDKKED----GHSESSTCGEEPSISGTPEKSSCTLS 375
>sp|P0CQ66|RAD5_CRYNJ DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3
SV=1
Length = 1198
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 212/755 (28%), Positives = 329/755 (43%), Gaps = 167/755 (22%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD G+GKT + +LI R + E +Q + + + D++ + + K K
Sbjct: 517 GGILADAMGMGKTCMMASLIHTNREEKPAGNLE---SQTRDGVEGEIDEEPASKRI-KFK 572
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
+ S+ + VP + SF R TLVVCP S+ QW EL K+ + +++ +
Sbjct: 573 QVTLSNQWRAVP-TAPKVESFPR-----ATLVVCPVSLAAQWHDELR-KMSQQGSINSYV 625
Query: 418 YHGGSRTKDPVELA-----KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEF 472
++GG R LA + DV++T+Y +T+E K +
Sbjct: 626 WYGGDRVDIEALLAGDGKERVDVIVTSYGTLTSEYQK----------------------W 663
Query: 473 SVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVAR 532
K R +Y G L + R+VLDEA I+N V++
Sbjct: 664 LRTKDRP---------------------NYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSK 702
Query: 533 ACCSLRAKR-----------------------------------STIKIPISRNSLHGYK 557
AC L+ +R S + +P
Sbjct: 703 ACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNYSFFRSFVTVPFLNQDHKALN 762
Query: 558 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 616
+Q +L + +LRR K DG+ I++LPPKT+ + + FS+ E YK LE + K+F
Sbjct: 763 VVQYILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFI 822
Query: 617 AFADAGTVNQNYANILLMLLRLRQACDHPLLV---------------------KEYDF-D 654
G NY +IL ML++LRQ DHPLLV E + D
Sbjct: 823 DLDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRD 882
Query: 655 SVGKISGEMAKRLPRDM----LIDLLSRL--ETSSAICCVCSDPPEDSVVTMCGHVFCYQ 708
+ +G + P D+ +L L + + IC +CS+ D V+ C H C
Sbjct: 883 MIAMYAGGIRAETPEDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQD 942
Query: 709 CASEYI-TGDDN--MCPAPRCKE---QLGADV--VFSKTTLKNCVSD--DGGGSPTDSPF 758
C E+I T +D + P C + +L AD+ V + N ++D GG P
Sbjct: 943 CIVEWIGTCEDQNKIASCPSCGKGPIKL-ADLRSVQRRHKRVNPITDAYPGGRDPNLKSS 1001
Query: 759 ADKSGILD--NEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEG 816
D + L + S+K+R +L L + + K
Sbjct: 1002 NDTTVTLGKVDLVTSTKLRALLRQLEEIRQEDPKA------------------------- 1036
Query: 817 PIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTD-REITVMLMS 875
K++VFSQ+T LDL+E +L + I++ R DGTMS R +++F E ++L+S
Sbjct: 1037 --KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLIS 1094
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
LKAG +GLN+ A++V L+D WWN E QA+DR HR+GQ +PV VTR I+ TVE RI+
Sbjct: 1095 LKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIM 1154
Query: 936 KLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
K+Q K +V ++ G T+ D++ +F
Sbjct: 1155 KIQRSKTALVNASLS---NGAKTKETTLADIKKIF 1186
>sp|Q7S1P9|RAD5_NEUCR DNA repair protein rad-5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rad-5
PE=3 SV=2
Length = 1222
Score = 243 bits (619), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 198/735 (26%), Positives = 320/735 (43%), Gaps = 186/735 (25%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++LI RS EV
Sbjct: 573 HCLGGILADEMGLGKTIQMLSLIHSHRS-------EVAI--------------------- 604
Query: 355 KVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALS 414
K +E G + + +P + T + + TLVV P S+L QW E E+ +
Sbjct: 605 KAREAGPTS-VNNLPRLPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAEN-ASKEGTFK 662
Query: 415 VLIYHGGSRTKDPVELA-------KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYG 467
++Y+G + D V + DV++T+Y +V +E + + KNG+
Sbjct: 663 TMMYYGAEKNVDLVTMCCEANAANAPDVIITSYGVVLSEFTQLAT--------KNGDRLS 714
Query: 468 LSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHR 527
FS+N +FRV+LDEA IKN +
Sbjct: 715 SRGLFSLN------------------------------------FFRVILDEAHNIKNRQ 738
Query: 528 TQVARACCSLRAK-----------------------------------RSTIKIPI-SRN 551
+ +RAC + A+ R+ I +P S+N
Sbjct: 739 AKTSRACYEIAAEHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWRTFITVPFESKN 798
Query: 552 SLHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLESD 610
+ +Q VL +++RRTK DGQ ++ LPPK I + ++ S+ E A Y + +
Sbjct: 799 FVRALDVVQTVLEPLVMRRTKDMKTPDGQFLVPLPPKHIEIVDIELSEPERAVYDYVFNR 858
Query: 611 SLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDF---DSVGKISGEMAKRL 667
+ + AGTV + + +I +LRLRQ+C HP+LV+ + + ++ ++A L
Sbjct: 859 AKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGL 918
Query: 668 PRDMLIDLLSRLETSSAI--------------------------CCVCSDPPE-DSVVTM 700
DM DL + +E +A C +C++ P D VT
Sbjct: 919 ADDM--DLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNECPICAEEPMIDQAVTG 976
Query: 701 CGHVFCYQCASEYITGDDNMCPAPR---CKEQLGADVVFSKTTLKNCV--SDDGGGSPTD 755
C H C +C +YI + PR C+E + +F + + S G SP
Sbjct: 977 CWHSACKKCLLDYIKHQTDRNEVPRCFQCREHINIRDIFEVIRHDDDLETSSTPGASPEP 1036
Query: 756 SPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIE 815
+ G D+ S+KI ++ L T + + K
Sbjct: 1037 RISLQRVGANDS---SAKIVALISHLRTLRQEHPK------------------------- 1068
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
+KS+V SQ+T L L+ ++L +H I + RLDG+MS AR + +F + + V+L+S
Sbjct: 1069 --MKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEFQSTNKFCVLLLS 1126
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
LKAG +GLN+ +A V ++D WW+ E QA+DR HR+GQ V V R ++ +VE R+L
Sbjct: 1127 LKAGGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQEDEVRVYRFIVKQSVEMRML 1186
Query: 936 KLQDDKRKMVASAFG 950
++Q +++K +A++ G
Sbjct: 1187 RVQ-ERKKFIATSLG 1200
>sp|Q5BHD6|RAD5_EMENI DNA repair protein rad5 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=rad5 PE=3 SV=1
Length = 1202
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 214/775 (27%), Positives = 326/775 (42%), Gaps = 223/775 (28%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++L+ R+L T+ LGN L
Sbjct: 509 HCLGGILADEMGLGKTIEMLSLVHSHRNL---PPTQSLGN------------------LT 547
Query: 355 KVKETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALS 414
++ +G + P P TLVV P S+L QW E K ++
Sbjct: 548 RLPVSG----VVPAPYT---------------TLVVAPMSLLAQWEGEAL-KASRNGSMK 587
Query: 415 VLIYHGGSRTKDPVEL------AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGL 468
VL+Y+G + + E+ A +++LT+Y +V +E
Sbjct: 588 VLMYYGNEKNVNLREMCSAGNAAAPNMILTSYGVVMSE---------------------- 625
Query: 469 SSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRT 528
+ G GN+ S V +FRV+LDEA IKN R+
Sbjct: 626 ----------HRTHQALAPGTSWTPGNLFS-----------VDFFRVILDEAHIIKNRRS 664
Query: 529 QVARACCSLRAK-----------------------------------RSTIKIPI-SRNS 552
+ ARAC L+A ++ I P S+
Sbjct: 665 KTARACYDLKATHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWKTFITAPFESKEV 724
Query: 553 LHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 611
+ +Q VL ++LRRTK +G+P++ LP +TI + KV+ ++E Y + + +
Sbjct: 725 VRAISVVQTVLEPLVLRRTKSMKTPEGEPLVPLPKRTIRIEKVELIEQEREIYNHIYTRA 784
Query: 612 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY-------------------- 651
+ F + AGT+ ++Y+ I LLRLRQ C HP+L +
Sbjct: 785 KQTFNSNVAAGTLLKSYSTIFAQLLRLRQTCCHPILTRNKAIVADEEDAAAAADQDSDLK 844
Query: 652 -DFD-------SVGKISGEMAKRLPRDMLIDL----LSRLETSSA-ICCVCSDPPE-DSV 697
D D S + P D + L +++T SA C +CS+ P D
Sbjct: 845 DDMDLQELINRFTATTSDAESSNEPPDPSMKFTAHALRQIQTESAGECPICSEEPMIDPA 904
Query: 698 VTMCGHVFCYQCASEYITGDDNMCPAPRC---KEQLGADVVFSKTTLKNCVSDDGGGSPT 754
VT C H C C +YI + PRC + L +F ++ +PT
Sbjct: 905 VTACWHSACKGCLKDYIQHQRDKGVQPRCFSCRADLNPQDIFEVVRYQS-----PNTTPT 959
Query: 755 DSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSA-VHSKSP 813
+ + G DN Y SS Q + S+ I+ L+ S +SA +H+
Sbjct: 960 EQTPSSIGG--DNVYSSS-----------QPPPPPRISLRRINPLSPSAHTSAKIHALLA 1006
Query: 814 ----IEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFN----- 864
+ KS+VFSQ+T LDL+ L + I + RLDGTM+ AR + F
Sbjct: 1007 HLVRVPAGTKSVVFSQFTSFLDLIGPQLTKAGISFVRLDGTMAQKARAEVLAQFTKFETF 1066
Query: 865 TDREI----------------------------TVMLMSLKAGNLGLNMVAASHVILLDL 896
T E+ TV+L+SLKAG +GLN+ AAS+V ++D
Sbjct: 1067 TQEELDQAESTSAPSGLTPTPKTPKQSSSPSSPTVLLISLKAGGVGLNLTAASNVFMMDP 1126
Query: 897 WWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKM-VASAFG 950
WW+ E QA+DR HR+GQ R V V R ++D++E+R+L++Q+ RKM +A + G
Sbjct: 1127 WWSFAIEAQAIDRVHRMGQLRDVNVVRFIVKDSIEERMLRVQE--RKMGIAGSLG 1179
>sp|Q4IJ84|RAD5_GIBZE DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1
Length = 1154
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 195/731 (26%), Positives = 315/731 (43%), Gaps = 182/731 (24%)
Query: 295 HCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLD 354
HCLGGILAD+ GLGKTI +++L+ RS EV + + + ++
Sbjct: 511 HCLGGILADEMGLGKTIQMLSLVHTHRS-------EVALEARQSVV--------ARSNVN 555
Query: 355 KVKETGE-SDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAAL 413
++ G+ S+ I P TLVV P S+L QW E E K +
Sbjct: 556 QLTRLGKNSESILDAP---------------CTTLVVAPMSLLSQWQSEAE-KASKDGTM 599
Query: 414 SVLIYHGGSRTKDPVELA-------KYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETY 466
+Y+G ++ + L D+V+T+Y +V
Sbjct: 600 KTELYYGNEKSSNLQALCCASNAANAPDLVITSYGVVL---------------------- 637
Query: 467 GLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNH 526
SEFS S + G K N L + +FR+++DEA IKN
Sbjct: 638 ---SEFS-----------SLAARNGDKSFHNG--------LFSLRFFRIIIDEAHHIKNR 675
Query: 527 RTQVARACCSLRAK-----------------------------------RSTIKIPI-SR 550
++ ++AC + A R+ I +P S
Sbjct: 676 SSKTSKACYEISATHRWALTGTPIVNKLEDLFSLVRFLGVEPWNNFSFWRTFITVPFESG 735
Query: 551 NSLHGYKKLQAVLRAIMLRRTKGTFI-DGQPIINLPPKTISLTKVDFSKEEWAFYKKLES 609
+ + +Q VL ++LRRTK DG+P++ LPPK I + V+ S+ E Y + +
Sbjct: 736 DFMRALDVVQTVLEPLVLRRTKDMKTPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFN 795
Query: 610 DSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDF--DSVGKISGEMAKRL 667
+ + F +AGTV + + I +LRLRQ+C HP+LV+ D D V +
Sbjct: 796 KAKRTFSQNVEAGTVMKAFTTIFAQILRLRQSCCHPILVRNRDIVADEV-EAGAAADAAA 854
Query: 668 PRDMLIDLLSRLETSSAI---------------------------CCVC-SDPPEDSVVT 699
+DL S + + +A+ C +C +P D VT
Sbjct: 855 GLADDMDLESLITSFTAVTDKASKESNQTFGAHALEQIRDEAENECPLCFEEPMNDQTVT 914
Query: 700 MCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFA 759
C H C +C +YI + PRC +K L V D
Sbjct: 915 GCWHSACKKCLLDYIKHQTDKAEVPRC---FSCREPINKRDLFEVVRHDD---------- 961
Query: 760 DKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIK 819
D++ +S K R L + +N + V +A + A+ + P +K
Sbjct: 962 ------DSDMMSKKPRISLQ----RVGVNASSAKV----VALMSELRALRREHP---KMK 1004
Query: 820 SIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAG 879
S+VFSQ+T L L+E +L + I++ RLDG+M+ AR + +F + T++L+SL+AG
Sbjct: 1005 SVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRAG 1064
Query: 880 NLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQD 939
+GLN+ +A V ++D WW+ E QA+DR HR+GQ V V R ++++VE+R+LK+Q
Sbjct: 1065 GVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLKVQ- 1123
Query: 940 DKRKMVASAFG 950
+++K +A++ G
Sbjct: 1124 ERKKFIATSLG 1134
>sp|Q6FY76|RAD5_CANGA DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3 SV=1
Length = 1151
Score = 229 bits (585), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 204/756 (26%), Positives = 326/756 (43%), Gaps = 197/756 (26%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGIL+D+ GLGKTIS ++L+ M R + ++ L +Q++ L+ DD
Sbjct: 508 GGILSDEMGLGKTISALSLVLM-RPKDEHTTSQSLFHQESSNLSSDD------------- 553
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
V E+ RS++ + TL++ P S+L QW E DKV + A L+ +
Sbjct: 554 ----------VIEIKEPERSYAYK----TTLIIVPMSLLTQWRDEF-DKVNNNAGLTCEL 598
Query: 418 YHGGSRTKDPVELAKYD----VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFS 473
Y+GG+ + L K VVLTTY IV NE K K+G
Sbjct: 599 YYGGNVSSLKSLLIKRKNPPTVVLTTYGIVQNEWTKL---------SKDG---------- 639
Query: 474 VNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARA 533
+N+ G+ + + +FR++LDE TI+N T ++A
Sbjct: 640 --------TNIRSLGR--------------TSGIFSIEFFRIILDEGHTIRNKSTITSKA 677
Query: 534 CCSLRAKRSTI--KIPI----------------------------------SRNSLHGYK 557
L +K I PI RN +
Sbjct: 678 VLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWSQIGYWKQFITNPFEERNFKQAFD 737
Query: 558 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 616
+ A++ ++LRRTK DG P++ LPPK I + K+ SK++ Y++ + K F+
Sbjct: 738 VVNAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKKQKLIYEEFLQRAEKTFR 797
Query: 617 AFADAGTVNQNYANILLMLLRLRQAC-------------------DHPLLVKEYDFDSVG 657
+ +G + + Y+ IL+ +LRLRQ C ++ L+ + D ++
Sbjct: 798 SGLQSGDLLKKYSTILVHILRLRQVCCDSNLIGTLDENDEDLSSGNNKLITESVDVKTLI 857
Query: 658 KISGEMAKRLP---RDMLIDLLSRLETS--------SAICCVCSDPPEDS---VVTMCGH 703
+ E +P D L L+ +E C +C+ P +S VVT C H
Sbjct: 858 PDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEH 917
Query: 704 VFCYQCASEYITGDDNMC---PAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFAD 760
VFC +C EY P C+ + L C++ + G
Sbjct: 918 VFCKECLEEYGNFQKEKSLQQKCPNCRRDIN---------LNRCLAFEKGSD-------- 960
Query: 761 KSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKS 820
GIL + K R +LN I + L S+ V
Sbjct: 961 --GILKLIHFDRKERP--------AKLN--ALIRHLQQLQDSSAGEQV------------ 996
Query: 821 IVFSQWTRMLDLVENSLNQ----HCIQYRRLDGTMSLPARDRAVKDFNT-DREIT-VMLM 874
+VFSQ++ LD++E+ LN+ + ++ + DG +SL R ++DF D + V+L+
Sbjct: 997 VVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDFKVKDYAVQKVLLL 1056
Query: 875 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 934
SLKAG +GLN+ AS+ ++D WW+P+ EDQA+DR HRIGQT V V R I ++E+++
Sbjct: 1057 SLKAGGVGLNLTCASYAFMMDPWWSPSMEDQAIDRIHRIGQTNSVKVIRFVIDGSIEEKM 1116
Query: 935 LKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
L++QD KR + A D+ R +E+++ LF
Sbjct: 1117 LRIQDRKRTL-GEAMDTDEDERRKRR--IEEIQMLF 1149
>sp|P32849|RAD5_YEAST DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD5 PE=1 SV=1
Length = 1169
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 195/759 (25%), Positives = 324/759 (42%), Gaps = 203/759 (26%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGIL+D+ GLGKT++ +L+ L+ D D + L ++
Sbjct: 527 GGILSDEMGLGKTVAAYSLV----------------------LSCPHDSDVVDKKLFDIE 564
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAG--TLVVCPASVLRQWARELEDKVPDKAALSV 415
T SD++ + ++P A TL+V P S+L QW+ E K + +
Sbjct: 565 NTAVSDNLPSTWQ--------DNKKPYASKTTLIVVPMSLLTQWSNEF-TKANNSPDMYH 615
Query: 416 LIYHGGS----RTKDPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSE 471
+Y+GG+ +T VVLTTY IV NE K
Sbjct: 616 EVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTKHS-------------------- 655
Query: 472 FSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVA 531
KG+ + + +I G L V ++R+++DE I+N T +
Sbjct: 656 ------------------KGRMTDEDVNISSG---LFSVNFYRIIIDEGHNIRNRTTVTS 694
Query: 532 RACCSLRAK-----------------------------------RSTIKIPI-SRNSLHG 555
+A +L+ K ++ + P S+N
Sbjct: 695 KAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKNYKQA 754
Query: 556 YKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKK 614
+ + A+L ++LRRTK DG+P++ LPPK + + ++ FSK + YK L +
Sbjct: 755 FDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVS 814
Query: 615 FKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYD-------------------FDS 655
K+ G + + Y+ IL+ +LRLRQ C HP L+ D DS
Sbjct: 815 VKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVELDS 874
Query: 656 VGKISGE-MAKRLPRDMLIDLLSRLET--------SSAICCVCSDPPED---SVVTMCGH 703
+ ++ E ++ L ++ RL+ S C +C+ P D ++ T CGH
Sbjct: 875 LMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGH 934
Query: 704 VFCYQCASEYITGDDNM---CPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFAD 760
FC +C EYI ++ P C+ Q+ A + + ++ + P++
Sbjct: 935 SFCEKCLFEYIEFQNSKNLGLKCPNCRNQIDACRLLALVQ-----TNSNSKNLEFKPYSP 989
Query: 761 KSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKS 820
S SSKI +L E+ L S+ V
Sbjct: 990 ASK-------SSKITALLK---------------ELQLLQDSSAGEQV------------ 1015
Query: 821 IVFSQWTRMLDLVENSL----NQHCIQYRRLDGTMSLPAR-----DRAVKDFNTDREITV 871
++FSQ++ LD++E L ++ + + DG +SL R D AVKD++ + +
Sbjct: 1016 VIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQK---I 1072
Query: 872 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVE 931
+L+SLKAG +GLN+ ASH ++D WW+P+ EDQA+DR HRIGQT V V R I+D++E
Sbjct: 1073 LLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIE 1132
Query: 932 DRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
+++L++Q+ KR + A D+ R +E+++ LF
Sbjct: 1133 EKMLRIQEKKR-TIGEAMDTDEDERRKRR--IEEIQMLF 1168
>sp|Q753V5|RAD5_ASHGO DNA repair protein RAD5 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RAD5 PE=3 SV=2
Length = 1085
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 206/729 (28%), Positives = 305/729 (41%), Gaps = 204/729 (27%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTISI+ALI M + S +K + Q+ + G+ L
Sbjct: 455 GGILADEMGLGKTISILALITM---VPSDTKHLLTTAQEKPPV--------GHLSL---- 499
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
E G S +KP A+ TL+V P S+L QW E +V D L +
Sbjct: 500 ELGIST-VKPYT--------------ASTTLIVVPMSLLPQWRNEFV-RVNDGNGLYCEV 543
Query: 418 YHGGSRTKDPVELAKY----DVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFS 473
Y+ G+ + L K VVLTTY +V E K D E ++E GL S
Sbjct: 544 YYAGNVSNLRTLLVKQKSPPSVVLTTYGVVQTEWSKLQQFDYEASNE------GLFS--- 594
Query: 474 VNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARA 533
V +FR++LDE I+N T+ ++A
Sbjct: 595 ------------------------------------VEFFRIILDEGHNIRNRTTKTSKA 618
Query: 534 CCSLRAKR-----------------STIKI------------------PISRNSLH-GYK 557
+L ++R S IK P + +
Sbjct: 619 VMALTSRRKWVLTGTPIMNRLDDLFSLIKFMNFEPWCKIDYWRQFVSDPFEKKDYSSALE 678
Query: 558 KLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFK 616
+QAV+ I+LRRTK DG P++ LPPK + + + FS E YK S + K
Sbjct: 679 VIQAVMGPILLRRTKNMKDEDGNPLVQLPPKEVVIEMIRFSDTEAGLYKYFLSKAEHSVK 738
Query: 617 AFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYD-----------FDSVGKIS----- 660
G + + Y+ ILL +LRLRQ C H L+ D + + IS
Sbjct: 739 ESLARGDLLKKYSTILLHILRLRQVCCHFKLLGSQDENDEDLKNMKLINDIPDISTLLGE 798
Query: 661 -----GEMAKRLPRDMLIDLLSRLETSSAI----CCVCS----DPPEDSVVTMCGHVFCY 707
G ++ +P D + D ++ S A+ C +C+ P V T CGH FC
Sbjct: 799 DSQSPGSSSEGMP-DFIEDFKTKYPNSDALKDLECSICTCEAISPLTSVVFTRCGHPFCE 857
Query: 708 QCASEYIT-----GDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSPFADKS 762
C EYI G + +CP R V S+ LK +D G P++
Sbjct: 858 SCLLEYIQFQNKKGSETICPNCRA-------AVESRYLLK---LEDINGKLEPVPYS--- 904
Query: 763 GILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIV 822
N SSKI + I + L ++ + V +V
Sbjct: 905 ----NTKKSSKIVAL---------------IRHLKHLQDTSANEQV------------VV 933
Query: 823 FSQWTRMLDLVENSLNQH-----CIQYRRLDGTMSLPARDRAVKDFNTDR--EITVMLMS 875
FSQ++ LD++EN L Q C Y+ DG + L R + F ++ V+L+S
Sbjct: 934 FSQFSSYLDILENELRQSFASDICEIYK-FDGRLDLKERSNVLAKFTEKSLVKMKVLLLS 992
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
LKAG +GLN+ ASH ++D WW+P EDQA+DR HRIGQ+ V + R + +++E+++L
Sbjct: 993 LKAGGVGLNLTCASHAFIMDPWWSPGMEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKML 1052
Query: 936 KLQDDKRKM 944
++Q+ KR +
Sbjct: 1053 RIQEKKRSL 1061
>sp|P79051|RHP16_SCHPO ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rhp16 PE=3 SV=2
Length = 861
Score = 210 bits (534), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 212/419 (50%), Gaps = 63/419 (15%)
Query: 555 GYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKK 614
+KK+ ++L+ IMLRRTK D + LPP+ + + K F++EE Y+ L DS +K
Sbjct: 501 AFKKVHSLLKHIMLRRTKLERADD---LGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRK 557
Query: 615 FKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYDFDSVGKISGEMAKRLPRDMLID 674
F + G V NYANI ++ R+RQ DHP LV +KR D
Sbjct: 558 FNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVL-------------ASKRKTVD---- 600
Query: 675 LLSRLETSSAICC-VCSDPPEDSVVTMCGHVFCYQCASEYI--TGDDNMCPAPRCKEQLG 731
+E I C +C + +D++ + C H FC C +EYI GD P C L
Sbjct: 601 ----IENQENIVCKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLS 656
Query: 732 ADVVFSKTTLKNCVSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKC 791
D+ +P F+++ ++ ++ I +D+ + +
Sbjct: 657 IDL----------------SAPALEDFSEE------KFKNASILNRIDMNSWRSSTKIEA 694
Query: 792 SIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTM 851
+ E++ L + + +KSIVFSQ+T MLDL+ L + +LDG M
Sbjct: 695 LVEELYLLRKKDRT------------LKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGM 742
Query: 852 SLPARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAH 911
+ AR ++ F+ D IT+ L+SLKAG + LN+ AS V ++D WWN + QA+DR H
Sbjct: 743 TPKARAATIEAFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIH 802
Query: 912 RIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
RIGQ RP+ V L I +++E +I++LQ+ K +M+ + +D+ ++L+VED+++LF
Sbjct: 803 RIGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKA--LNQLSVEDMQFLF 859
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 42/155 (27%)
Query: 387 TLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNE 446
TLVV P + QW E++ ALS +Y+G +R EL+ YDVVLT+Y+++
Sbjct: 304 TLVVAPVVAIMQWKEEIDTHT--NKALSTYLYYGQARDISGEELSSYDVVLTSYNVIE-- 359
Query: 447 VPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGP 506
SV +K + G + K G V
Sbjct: 360 --------------------------SVYRKERS-------GFRRKNGVVKEK-----SL 381
Query: 507 LAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKR 541
L ++ ++R++LDEA IK+ ARA C LR R
Sbjct: 382 LHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTR 416
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 271 LSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
L +NLL Q+ + W+ ++E S GGILAD+ G+GKTI IAL+
Sbjct: 251 LVLNLLPFQREGVYWLKRQEDSSFG--GGILADEMGMGKTIQTIALL 295
>sp|Q6CJM4|RAD5_KLULA DNA repair protein RAD5 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RAD5 PE=3 SV=1
Length = 1114
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 198/758 (26%), Positives = 315/758 (41%), Gaps = 208/758 (27%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTIS +ALI S + ++ +K +K
Sbjct: 479 GGILADEMGLGKTISALALI-CTASYDEAHEKKIESTKKP-----------------SMK 520
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
E D P+ +++ R TL+V P S+L QW E E D +
Sbjct: 521 EMSSQVDSSPLRHSQHKHDTYAYR----TTLIVVPMSLLNQWQSEFEKANKDLKKRCEIY 576
Query: 418 YHGGSRTKDPVELAKY-------DVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSS 470
Y G+ KD L Y V++TTY I+ +E YG +S
Sbjct: 577 Y--GNNIKD---LRAYVLGPNAPSVIITTYGIIQSE-------------------YGRTS 612
Query: 471 EFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQV 530
L V +FR++LDE TI+N T+
Sbjct: 613 ---------------------------------TSGLFNVVFFRIILDEGHTIRNRSTRT 639
Query: 531 ARACCSLRAKRSTI-----------------------------------KIPISR-NSLH 554
++A +LR+ R I +P + N
Sbjct: 640 SKAVIALRSSRKWILTGTPIINRLDDLFSLVQFLNLEPWSHINYWKRYVSVPFEKGNYAQ 699
Query: 555 GYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLK 613
+ + AVL ++LRRTK +DG+P+++LPPK + + K+ S E Y+ + D+
Sbjct: 700 AFDVINAVLEPVLLRRTKNMKDVDGKPLVSLPPKEVIVEKLQLSSSEKRVYQSMLEDAEN 759
Query: 614 KFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEY------DFDSVGKISGEMAKRL 667
K G + +NY NIL+ +LRLRQ C H L+K+ D + + + ++ L
Sbjct: 760 SVKEGLAKGDLLKNYTNILVHILRLRQVCCHLDLLKKTPDLGDPDLEDLENSTQNISSIL 819
Query: 668 -PRDML----------IDLLSR----LETSS--------AICCV-CSDPPEDSVVTMCGH 703
P+++ +D LS + ++S AIC C +P +T C H
Sbjct: 820 MPKNIKSPKSSISQDKLDALSANFRDIHSASEQLPSFECAICTTECIEPLSAVSITECLH 879
Query: 704 VFCYQCASEYITGDDNM---CPAPRCKEQLG-ADVVFSKTTLKNCVSDDGGGSPTDSPFA 759
FC C +EYI N P C+ + A+V+ K P D+
Sbjct: 880 TFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVLKLK-------------EPIDAERG 926
Query: 760 DKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIK 819
+ + + S+KI+ +L L + SP E +
Sbjct: 927 YELISFHSHFQSTKIKALLRHL------------------------KQIQETSPGE---Q 959
Query: 820 SIVFSQWTRMLDLVENSLNQHC----IQYRRLDGTMSLPARDRAVKDFNTDRE---ITVM 872
IVFSQ++ LD++E L H + + DG + + R R ++ F+ D++ I ++
Sbjct: 960 IIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDMKERTRILEQFH-DKDLSCIKLL 1018
Query: 873 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVED 932
L+SLK G +GLN+ AS ++D WW+P EDQA+DR HRIGQ + V V R I ++VE+
Sbjct: 1019 LLSLKTGGVGLNLTCASRAFMMDPWWSPGMEDQAIDRIHRIGQQQTVKVVRFIIDNSVEE 1078
Query: 933 RILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
++L++Q+ KR M+ D+ R +E+++ LF
Sbjct: 1079 KMLRIQERKR-MLGDIVEGDEAERRQKR--IEEIQMLF 1113
>sp|Q6BIP2|RAD5_DEBHA DNA repair protein RAD5 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RAD5 PE=3
SV=2
Length = 1190
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 187/770 (24%), Positives = 322/770 (41%), Gaps = 218/770 (28%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTIS +ALI + +D +
Sbjct: 539 GGILADEMGLGKTISTLALI-------------------------------NSVPIDVMF 567
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
E + + K + T TL++ P S+L QW +E DK + + I
Sbjct: 568 EENKELEDKTIYASKT-------------TLIIVPMSLLSQWQKEF-DKANNNSNHKCFI 613
Query: 418 YHGGSRTKD--PVELAKYD----VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSE 471
Y+G S T D PV K V++TTY V NE +
Sbjct: 614 YYGDSATTDLSPVLCNKKKDIPIVMITTYGTVLNEFTR---------------------- 651
Query: 472 FSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVA 531
ISN +R KG + L V +FR+VLDE I+N + +
Sbjct: 652 ---------ISN--RRDAKGFLPKIG---------LFSVKFFRIVLDEGHNIRNRTAKTS 691
Query: 532 RACCSLRAKR-----------------------------------STIKIPISRNSL-HG 555
+A + + R + + +P + +
Sbjct: 692 KAIYEILSNRKWVLTGTPVINRLDDLYSLVKFLELEPWSNFSYWKTFVTLPFEQRKISQT 751
Query: 556 YKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKK 614
++++L I +RRTK +G+P++ LPPK + + +V F++ E Y ++ + +
Sbjct: 752 LDVVKSILEPIFIRRTKNMKQSNGKPLVELPPKEVVIEEVKFNEVEEKLYNWFKARASQS 811
Query: 615 FKAFADAGTVNQNYANILLMLLRLRQACDHPLLV-----KEYDF--------------DS 655
FK +G + + Y+ IL +LRLRQ C H LV E + DS
Sbjct: 812 FKDGIKSGDLFKKYSQILTHILRLRQVCCHVDLVGSANEMEQELVDPNTDLSEANGESDS 871
Query: 656 VGKISGEMAKRLP--------------RDMLIDLLSRLETSSAICCVCSDPP---EDSVV 698
+ ++ + R ++ L +++ + C +C+ P + +
Sbjct: 872 ISMVNNVLDSYHADNNHDEKFKNNTEVRSVMFPLYEKIDLKESECSICTQSPIPLGEMAL 931
Query: 699 TMCGHVFCYQCASEYITGDDN-----MCPAPRCKEQLGADVVFS----KTTLKNCV--SD 747
T CGH +C C E+ + +CP C+E + +F T++K +
Sbjct: 932 TPCGHAYCLNCVLEHFDFQEKNSQKPLCP--NCREPISKYKIFKLRHRDTSVKEIRFHTK 989
Query: 748 DGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSA 807
P+ + F + + D SSKI QC +N
Sbjct: 990 QEMEDPSQN-FKFQLYLYDPTKTSSKI---------QCLIN---------------HLKI 1024
Query: 808 VHSKSPIEGPIKSIVFSQWTRMLDLVENSL----NQHCIQYRRLDGTMSLPARDRAVKDF 863
+ +SP E + +VFSQ++ LD++EN L + + Y+ DG +++ R + +++F
Sbjct: 1025 LKEQSPNE---QVVVFSQFSSYLDIIENELKIQISNDFVVYK-FDGRLNMNERQKILENF 1080
Query: 864 NTDR---EITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVT 920
++ + ++ ++L+SLKAG +GLN+ AS ++D WW+P+ EDQA+DR HRIGQ V
Sbjct: 1081 SSQKHENKVMILLLSLKAGGVGLNLTTASRAFMMDPWWSPSVEDQAIDRLHRIGQNSNVK 1140
Query: 921 VTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
VTR + D++E ++LK+Q +++K + A G ++ R +E+++ LF
Sbjct: 1141 VTRFIMADSIETKMLKIQ-ERKKQIGEAVGAEEDERRKRR--IEEMQILF 1187
>sp|Q5ACX1|RAD5_CANAL DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RAD5 PE=3 SV=1
Length = 1084
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 177/721 (24%), Positives = 297/721 (41%), Gaps = 193/721 (26%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTI+ +AL+ + D
Sbjct: 458 GGILADEMGLGKTIATLALV-------------------------------NSVPYDNF- 485
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLI 417
P P+ S R ++ + TL+V P S+L QW E E + + L
Sbjct: 486 ---------PEPK---SDRPYA----SQTTLIVVPMSLLFQWKSEFEKCNNNSRHVCRLH 529
Query: 418 YHGGSRTKDPVELAKYD------VVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSE 471
Y T L D V++TTY V NE +
Sbjct: 530 YGEDQETNLAWSLCNPDNSKIPIVMITTYGTVLNEFTR---------------------- 567
Query: 472 FSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVA 531
++K+R + K G L V +FR++LDE I+N T+ A
Sbjct: 568 --LSKRRNSKGELPKVG------------------LYSVKFFRIILDEGHNIRNRNTKTA 607
Query: 532 RACCSLRAKRSTI--KIPISR-----------------NSLHGYKKL------------- 559
++ L++ R I PI N+ +K
Sbjct: 608 KSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLELDPWNNFSYWKTFVTLPFEQKKISQT 667
Query: 560 ----QAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKF 615
+++L I LRRTK +G+P++ LP K + + ++ F+ +E Y+ + + F
Sbjct: 668 LDVVKSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIKFNDDEEKLYQWFKDRAYASF 727
Query: 616 KAFADAGTVNQNYANILLMLLRLRQACDHPLLV---KEYDFDSVGKISGE-MAKRLP--- 668
+G + + Y IL +LRLRQ C H L+ E D + + E M K L
Sbjct: 728 AEGIKSGQLLRRYTQILTHILRLRQVCCHVDLIGGAHEMDDEIIEAEQDEDMRKFLTSIK 787
Query: 669 ------------RDMLIDLLSRL--ETSSAICCVCSDPPEDSVVTMCGHVFCYQCASEYI 714
++ + +L ++ E +IC P + VVT C H FC C E++
Sbjct: 788 ENQIRFANDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHL 847
Query: 715 -----TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDDGGGSPTDSP-FADKSGILDNE 768
+ +C P C+ + +F ++ + D+P ++ + + D
Sbjct: 848 DFQKELKKEKLC--PNCRSPISKYQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPN 905
Query: 769 YISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSKSPIEGPIKSIVFSQWTR 828
SSKI+ ++ L A+HS+SP K IVFSQ++
Sbjct: 906 RSSSKIQALVRHL------------------------KALHSQSPNS---KVIVFSQFSS 938
Query: 829 MLDLVENSLNQHCIQY--RRLDGTMSLPARDRAVKDFNT---DREITVMLMSLKAGNLGL 883
LD++++ L ++ + DG +++ R + ++ FN D ++ ++L+SLKAG +GL
Sbjct: 939 YLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQPLEDGKVAILLLSLKAGGVGL 998
Query: 884 NMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRK 943
N+ AS ++D WW+P+ EDQA+DR HRIGQ V V R + +++E ++LK+Q+ K++
Sbjct: 999 NLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMENSIETKMLKIQERKKQ 1058
Query: 944 M 944
+
Sbjct: 1059 I 1059
>sp|Q6C2R8|RAD5_YARLI DNA repair protein RAD5 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=RAD5 PE=3 SV=1
Length = 1025
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 202/770 (26%), Positives = 313/770 (40%), Gaps = 151/770 (19%)
Query: 255 EDLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISII 314
ED+ QP+ E +G + L ++QK L WM+ +ET DD G I
Sbjct: 351 EDVEQPETEV---EGF-PLELRRYQKQGLTWMISRETEVSEYFDN---DDSG-----PIN 398
Query: 315 ALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTS 374
L S K V + L + + + G+ +D++ +ST
Sbjct: 399 PLWTKVDFPGSDEKFYVNFSSGALTLKFPKQERSFSGGI-------LADEMGLGKTISTL 451
Query: 375 TRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKY- 433
+ R R TLVV P S+L QW +E E + LS +YH D EL K
Sbjct: 452 AMVY-RDRHVGCTLVVAPMSLLWQWEQECE-----RVGLSTYVYHEKGADIDLDELFKTY 505
Query: 434 --DVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKG 491
++++T+Y + + YG R IS S +
Sbjct: 506 SPNILITSYHTLVSH-------------------YGQIKALGGGLDRNVISETSSHERPK 546
Query: 492 KKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAK----------- 540
+ + R+VLDEA IKN T A+ACC LRA
Sbjct: 547 ---------------IFTKHFHRIVLDEAHVIKNRNTVSAKACCLLRATNKWALTGTPIH 591
Query: 541 ------------------------RSTIKIPISRNSL-HGYKKLQAVLRAIMLRRTKGTF 575
R+ I +P + +Q +L I+LRRTK
Sbjct: 592 NRLEDLFSILKFLGAAPWNDFIYWRNFITLPFQEGKIVSALMTVQCILEPIVLRRTKNMK 651
Query: 576 -IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAFADAGTVNQNYANILLM 634
DG P++ LP KTI++ KV + +E Y + + + + + V +NY NIL
Sbjct: 652 QADGSPLVVLPKKTINIEKVALTDQERVIYSYVLARAQTSLQKSEASEAVGRNYLNILTQ 711
Query: 635 LLRLRQACDHPLLV--KEYDFDSVGKISGEMAKRLPRDMLIDL-----LSRLETSSAICC 687
+LRLRQ+C P L+ E + + ++ E + + M+ S E SS I
Sbjct: 712 ILRLRQSCCDPALILRPEAEVPTDEQLQIEENESQLKSMIQQYNDDTQTSACEYSSEIIA 771
Query: 688 VCSD---PPEDSVVTMCGHVFCYQCASEYITGDDNMCPAPRCKEQLGADVVFSKTTLKNC 744
D PPE C CA + + C C + L +V F ++ +
Sbjct: 772 QLQDQSAPPE-----------CPICAEDVTKLAISKCLHMGCVDCLADNVRFQESKKQTP 820
Query: 745 VSDDGGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNG 804
V I + + DI + C + + L+
Sbjct: 821 VC----------------------CICRQPAALKDIFEVE-RTGEDCKDIRLKKLSDRPR 857
Query: 805 SS---AVHSK-SPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAV 860
SS A+ SK + KS+VFSQ+T LD+++ L + IQ R DGT+S R +
Sbjct: 858 SSKLVALVSKLKQLPKDAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVL 917
Query: 861 KDFNTDREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVT 920
K F + +V+L+SLK G +GLN+V A+H ++D WW E QA+DR HR+GQT+ V
Sbjct: 918 KAFGLSKG-SVLLISLKTGGVGLNLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQTKDVH 976
Query: 921 VTRLTIRDTVEDRILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
VTR + ++VE+++LK+Q K ++A G + A R +E+++ L
Sbjct: 977 VTRFIVENSVEEKMLKIQQQK-MVLAGTLGMSEQEQKAQR--IENIKTLL 1023
>sp|Q4PGG5|RAD5_USTMA DNA repair protein RAD5 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RAD5 PE=3 SV=1
Length = 1387
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 40/327 (12%)
Query: 647 LVKEYDFDSVGKISGEMAKRLPRDMLIDLLSRLETSSAI-----------CCVCSDPPED 695
LV ++ D G+ + + + + L+ + A C +C + +
Sbjct: 1058 LVAQFQLDEAGEAGDDSTESYTKATVERLIGEMHGDQATVPPVVSDGENECPICLEESQI 1117
Query: 696 SVVTM--CGHVFCYQCASEYI-----TGDDNMCPAPRCKEQLGADVVFSKTTLKNCVSDD 748
S + C H C C +Y+ GD CP R D++ + T +
Sbjct: 1118 SPCYLPRCMHSACKACLVDYLGQCKQKGDQGACPTCRKGPVQETDLIEAIRTRPATRAAS 1177
Query: 749 GGGSPTDSPFADKSGILDNEYISSKIRTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAV 808
GG SPTD P + + +V +++ + L T + + S +
Sbjct: 1178 GGASPTDRPGK-----------ACTLTSVPSVIYVRNNLRTSTKLSAL--------ISHL 1218
Query: 809 HSKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNT--- 865
++ E K ++FSQ+T LDL+E L ++ + RLDG+ RD+ V +F +
Sbjct: 1219 NTLRATEAAFKGVIFSQFTSFLDLIEPVLTRYRFHFLRLDGSTPQKVRDKLVLEFQSPSP 1278
Query: 866 DREITVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLT 925
+ + L+SLKAG +GLN+ AA+ + LLD WWN + E+QA+DR HR GQT PV+V R
Sbjct: 1279 TNHVVLFLISLKAGGVGLNLTAANKIWLLDFWWNSSIENQAIDRIHRFGQTSPVSVFRYI 1338
Query: 926 IRDTVEDRILKLQDDKRKMVASAFGED 952
I+D++EDRIL +Q K ++ A D
Sbjct: 1339 IKDSIEDRILLIQKRKDMLIKHALNTD 1365
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 161/397 (40%), Gaps = 98/397 (24%)
Query: 298 GGILADDQGLGKTISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVK 357
GGILAD+ GLGKTI + +L+ R T G + +N D G K
Sbjct: 653 GGILADEMGLGKTIMVASLLHANR-------TSDPGEESEGEINAVD----AAEGDVSTK 701
Query: 358 ETGESDDIKPVPEVSTSTRSFSRRRP--------AAGTLVVCPASVLRQWARELEDKVPD 409
G + + ST S +R+ +LVV P S++ QW EL +
Sbjct: 702 RKGSAKQTSLASAFAASTSSVDQRKALLKASVSKGKASLVVAPMSLIGQWRDELI-RASA 760
Query: 410 KAALSVLIYHGGSRTK--DPVELAKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYG 467
+L+ ++Y+ ++ +E K DVV+T+Y + E
Sbjct: 761 PGSLTPVLYYADTKGDLLAQLESGKVDVVITSYGTLVTEY-------------------- 800
Query: 468 LSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHR 527
R+ + G N + S+ PL + W RV+LDEA IKN
Sbjct: 801 ----------RRFLDG-------GGASNRHLSV---SAPLYCIDWLRVILDEAHNIKNRS 840
Query: 528 TQVARACCSLRAKR-----------------------------------STIKIPISRNS 552
T ARACC L ++R S + P S
Sbjct: 841 TMNARACCDLVSRRRWALTGTPIINRLTDLFSLLKFLRVEPWGDFSFFNSFVCKPFQAKS 900
Query: 553 LHGYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFSKEEWAFYKKLESDS 611
+Q +L +++LRR K DG+PI+ LPPKTI + +++FS+ E Y + +
Sbjct: 901 TKALDVVQVILESVLLRREKKMKDKDGKPIVELPPKTIVVKELEFSELERRIYDNVYRRA 960
Query: 612 LKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLV 648
+F + GTV +N + I +L+RLRQA HP LV
Sbjct: 961 YLQFASLKANGTVTRNLSVIFSVLMRLRQAVCHPSLV 997
>sp|Q5NC05|TTF2_MOUSE Transcription termination factor 2 OS=Mus musculus GN=Ttf2 PE=1
SV=2
Length = 1138
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 193/446 (43%), Gaps = 144/446 (32%)
Query: 271 LSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQMQRSLQSKSKTE 330
L V LL HQK ALAW+L +E++ GGILADD GLGKT+++IALI +++ Q KSK
Sbjct: 542 LKVPLLLHQKQALAWLLWRESQKPQ--GGILADDMGLGKTLTMIALILTKKN-QQKSK-- 596
Query: 331 VLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRS-FSRRRPAAGTLV 389
E + +PV +S + S F+ ++GTL+
Sbjct: 597 ------------------------------EKERSEPVTWLSKNDSSVFT----SSGTLI 622
Query: 390 VCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIVTNEVPK 449
VCPAS++ W E+E +V L + +YHG +R++ L+ YD+V+TTYS++ E+P
Sbjct: 623 VCPASLIHHWKNEVEKRVTSNR-LRIYLYHGPNRSRHAKVLSTYDIVITTYSLLAKEIP- 680
Query: 450 QPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYGCGPLAK 509
++ GE G N S++ PL +
Sbjct: 681 --------TTKQEGEVPG----------------------------ANLSVEGTSAPLLQ 704
Query: 510 VGWFRVVLDEAQTIKNHRTQVARACCSL--RAKRSTIKIPISRN---------------- 551
V W R++LDEA +KN R Q + A C L +A+ + PI N
Sbjct: 705 VVWARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPF 764
Query: 552 -------------SLHGYKKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISLTKVDFS 597
S+ G ++L + ++++LRRTK G+P++ LP + L ++ S
Sbjct: 765 DEFSLWKSQVDNGSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVALPARRCQLHRLKLS 824
Query: 598 KEEWAFYKKLESDSLKKFKAFAD------------------------AGTVNQ------- 626
++E A Y + S +++ +V+Q
Sbjct: 825 EDERAVYDIFLARSRSALQSYLKRQEGRGSHHGRSPDNPFSRVAQEFGSSVSQGCPAADS 884
Query: 627 ---NYANILLMLLRLRQACDHPLLVK 649
+ ++L LLRLRQ C H L+K
Sbjct: 885 QRPSTVHVLSQLLRLRQCCCHLSLLK 910
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
G KS++ SQWT ML +V L ++ + Y +DG+++ R V+ FN + VML+S
Sbjct: 984 GSQKSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLIS 1043
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
L AG +GLN+ +H+ LLD+ WNP+ EDQA DR +R+GQ + V + R TVE++IL
Sbjct: 1044 LLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKIL 1103
Query: 936 KLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLFMV 972
+LQ+ K+ + + G ++LT+ DL+ LF +
Sbjct: 1104 QLQEKKKDLAKQVLSGSE--GPVTKLTLADLKILFGI 1138
>sp|P34739|TTF2_DROME Transcription termination factor 2 OS=Drosophila melanogaster
GN=lds PE=1 SV=2
Length = 1061
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 195/470 (41%), Gaps = 152/470 (32%)
Query: 251 QAALEDLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKT 310
+LEDL P+V A P GL V+L+ HQK ALAWM +E + GGILADD GLGKT
Sbjct: 416 HVSLEDLPGPEVLAEDPVGL-KVSLMNHQKHALAWMSWRERKLPR--GGILADDMGLGKT 472
Query: 311 ISIIALIQMQRSLQSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPE 370
+++I+ + ++ Q S+ G ++ + +DD + + K G D
Sbjct: 473 LTMISSVLACKNGQEMSE----GKDESSDSDSEDDKNKKRKSVTGWKSKGRKD------- 521
Query: 371 VSTSTRSFSRRRPAAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVEL 430
+RR GTLVVCPAS+LRQW E+E KV + L+V ++HG +R L
Sbjct: 522 --------TRR---GGTLVVCPASLLRQWESEVESKV-SRQKLTVCVHHGNNRETKGKYL 569
Query: 431 AKYDVVLTTYSIVTNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKK 490
YD+V+TTY IV E LS+ F V
Sbjct: 570 RDYDIVVTTYQIVAR------------------EHKSLSAVFGVK--------------- 596
Query: 491 GKKGNVNSSIDYGCGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLRAKR--STIKIPI 548
W R++LDEA ++NH++Q + A C LR K + PI
Sbjct: 597 ---------------------WRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPI 635
Query: 549 SR-----------------NSLHGYKK------------LQAVLRAIMLRRTKGTFIDGQ 579
+ LH +KK L +++++MLRRTK
Sbjct: 636 QNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQNRLNLLMKSLMLRRTKAQLQSDG 695
Query: 580 PIINLPPKTISLTKVDFSKEEWAFYKKLESDSLKKFKAF----------------ADAGT 623
+ +LP K + L ++ KEE Y+ + + S F F A+ T
Sbjct: 696 KLNSLPNKELRLIEISLDKEEMNVYQTVMTYSRTLFAQFLHQRAERETDFNYRSDANKPT 755
Query: 624 VNQ-------------NYA------------NILLMLLRLRQACDHPLLV 648
NQ +A +IL++LLRLRQ C HP L+
Sbjct: 756 YNQIKDPNGAYYKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLI 805
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 819 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFN-TDREITVMLMSLK 877
K+IV SQWT +LD++ + L++ + L+GT+ + R V +FN + + V+L+SL
Sbjct: 910 KAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLT 969
Query: 878 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 937
AG +GLN++ A+H++LLDL WNP E QA DR +R+GQ + V + + DTVE RI L
Sbjct: 970 AGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGL 1029
Query: 938 QDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
QD K + A G G +S+LT++DL+ LF
Sbjct: 1030 QDKKLDL---ADGVLTGAKVSSKLTIDDLKGLF 1059
>sp|Q9UNY4|TTF2_HUMAN Transcription termination factor 2 OS=Homo sapiens GN=TTF2 PE=1
SV=2
Length = 1162
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 208/512 (40%), Gaps = 151/512 (29%)
Query: 210 PSSLMHGKSVSMTQFGGPSDLAYRSGSADERAVGGDERLIYQA------ALEDLNQPKVE 263
P + KS GG S YR G ++ V ++ +A +LE V
Sbjct: 502 PVGSLELKSACQVTAGGSSQ-CYR-GHTNQDHVHAVWKITSEAIGQLHRSLESCPGETVV 559
Query: 264 ATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQMQRSL 323
A P GL V LL HQK ALAW+L +E++ GGILADD GLGKT+++IALI L
Sbjct: 560 AEDPAGL-KVPLLLHQKQALAWLLWRESQKPQ--GGILADDMGLGKTLTMIALI-----L 611
Query: 324 QSKSKTEVLGNQKTEALNLDDDDDNGNAGLDKVKETGESDDIKPVPEVSTSTRSFSRRRP 383
K++ + +K+ AL DD+ + F+
Sbjct: 612 TQKNQEKKEEKEKSTALTWLSKDDSCD---------------------------FT---- 640
Query: 384 AAGTLVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVELAKYDVVLTTYSIV 443
+ GTL++CPAS++ W E+E +V + L V +YHG +R L+ YD+V+TTYS+V
Sbjct: 641 SHGTLIICPASLIHHWKNEVEKRV-NSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLV 699
Query: 444 TNEVPKQPSVDEEEADEKNGETYGLSSEFSVNKKRKKISNVSKRGKKGKKGNVNSSIDYG 503
E+P NK+ +I N +++
Sbjct: 700 AKEIP-------------------------TNKQEAEIPGA------------NLNVEGT 722
Query: 504 CGPLAKVGWFRVVLDEAQTIKNHRTQVARACCSLR--AKRSTIKIPISRNSLHGY----- 556
PL ++ W R++LDEA +KN R Q + A C L+ A+ + PI N L Y
Sbjct: 723 STPLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKF 782
Query: 557 ------------------------KKLQAVLRAIMLRRTKGTF-IDGQPIINLPPKTISL 591
++L + ++++LRRTK G+P++ LP + L
Sbjct: 783 LRCSPFDEFNLWRSQVDNGSKKGGERLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQL 842
Query: 592 TKVDFSKEEWAFYKKLESDSLKKFKAFAD------------------------------- 620
+ S++E Y + S +++
Sbjct: 843 HHLKLSEDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEEPRH 902
Query: 621 ---AGTVNQNYANILLMLLRLRQACDHPLLVK 649
A + + +IL LLRLRQ C H L+K
Sbjct: 903 SEAADSPRSSTVHILSQLLRLRQCCCHLSLLK 934
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 819 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKA 878
KS++ SQWT ML +V L +H + Y +DG+++ R V+ FN R VML+SL A
Sbjct: 1011 KSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLA 1070
Query: 879 GNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQ 938
G +GLN+ +H+ LLD+ WNP+ EDQA DR +R+GQ + V + R TVE++IL+LQ
Sbjct: 1071 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQ 1130
Query: 939 DDKR---KMVASAFGEDQGGGTASRLTVEDLRYLFMV 972
+ K+ K V S GE + ++LT+ DLR LF +
Sbjct: 1131 EKKKDLAKQVLSGSGE-----SVTKLTLADLRVLFGI 1162
>sp|P47264|Y018_MYCGE Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG018 PE=3
SV=3
Length = 1031
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 116/201 (57%), Gaps = 7/201 (3%)
Query: 775 RTVLDILHTQCELNTKCSIVEIHDLAGSNGSSAVHSK-----SPIEGPIKSIVFSQWTRM 829
+ L+IL +L CS+V+ +D+ +S ++ +E K I+F+Q+ +
Sbjct: 832 KNALNILSLILKLRHICSLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDV 891
Query: 830 LDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGNLGLNMVAAS 889
+D + +L I + DG ++ R+ ++ FN+ +E VML SLKAG +G+N+ AA
Sbjct: 892 IDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAE 951
Query: 890 HVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDDKRKMVASAF 949
VI D+WWN E+QA DRAHRIGQ++ V V R+ ++T+E+R+ ++Q+ K+++V
Sbjct: 952 VVIHFDVWWNSAVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTL 1011
Query: 950 GEDQGGGTASRLTVEDLRYLF 970
ED + L+ E+L LF
Sbjct: 1012 VEDVNFFKS--LSHEELLKLF 1030
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 47/171 (27%)
Query: 515 VVLDEAQTIKNHRTQVARA--------CCSL-------------------------RAKR 541
VV+DEAQ IKN + V +A C +L K+
Sbjct: 699 VVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQ 758
Query: 542 STIKIPISRNSLHGYKKLQAVLRAIMLRRTKGTFIDGQPIINLPPKTISLTKVDFSKEEW 601
+ + +N ++KL +LRRTK + + LP K I+ V+ S+E
Sbjct: 759 FSDQFEKEKND-ESFQKLMKKTSPFILRRTKN-----KVLKELPKKIITDIYVELSEEHQ 812
Query: 602 AFYKKLESDSLKKFKAFADAGTVNQNYANILLMLLRLRQACDHPLLVKEYD 652
Y K ++D LK+ K +DA +N NIL ++L+LR C LVK+ D
Sbjct: 813 KLYDKQKTDGLKEIKE-SDA----KNALNILSLILKLRHICS---LVKDND 855
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 274 NLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALIQMQRSLQS 325
NL K+QK + W+ E GGILAD+ GLGKT +I M S QS
Sbjct: 577 NLRKYQKEGVKWIRALEDNQF---GGILADEMGLGKTAQVI--FAMLDSYQS 623
>sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC
18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1
Length = 1707
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Query: 815 EGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLM 874
EG + +++ Q TRM+DL+E L +Y RLDG+ L R V DF T EI + L+
Sbjct: 1436 EGGHRVLLYFQMTRMIDLMEEYLTYRNYKYLRLDGSTKLEDRRDTVHDFQTRPEIFIFLL 1495
Query: 875 SLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRI 934
S +AG LG+N+ +A VI D WNPT + QA+DRAHR+GQTR VTV R+ R T+E+RI
Sbjct: 1496 STRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRMITRGTIEERI 1555
Query: 935 LK--LQDDKRKMVASAFGEDQGGG 956
K LQ ++ + V G GGG
Sbjct: 1556 RKRALQKEEVQKVVMTGG--AGGG 1577
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
D+ QPK +L L ++Q L W++ + ++ GILAD+ GLGKT+ I+
Sbjct: 830 DIEQPK--------MLQAQLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTVQSIS 878
Query: 316 LI 317
++
Sbjct: 879 VM 880
>sp|P75093|Y020_MYCPN Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_020 PE=3
SV=1
Length = 1030
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 814 IEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVML 873
IE K I+F+Q+ ++D +++ + I+Y DG S +R ++ FN + V+L
Sbjct: 875 IENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLL 934
Query: 874 MSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDR 933
SLKAG +G+N+ AA VI D+WWN E+QA DRAHRIGQ + V V R+ ++T+E+R
Sbjct: 935 ASLKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEER 994
Query: 934 ILKLQDDKRKMVASAFGEDQGGGTASRLTVEDLRYLF 970
+ ++Q +K+++V+ ED + LT E+L LF
Sbjct: 995 VCQVQAEKQELVSKTLVEDVNFFES--LTNEELLRLF 1029
>sp|A1CZE5|INO80_NEOFI Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1
Length = 1708
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 75/116 (64%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+DL+E L +Y RLDG+ L R V DF EI V L+S +AG
Sbjct: 1438 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGG 1497
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 936
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K
Sbjct: 1498 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK 1553
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
+++QPK +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+
Sbjct: 822 EISQPK--------MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSIS 870
Query: 316 LI 317
++
Sbjct: 871 VM 872
>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=ino80 PE=3 SV=1
Length = 1697
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 75/116 (64%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+DL+E L +Y RLDG+ L R V DF EI V L+S +AG
Sbjct: 1426 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGG 1485
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 936
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K
Sbjct: 1486 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK 1541
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 262 VEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
+E + P+ +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+++
Sbjct: 811 IEISQPN-MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSISVM 862
>sp|Q4WTV7|INO80_ASPFU Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3
SV=1
Length = 1708
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 75/116 (64%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+DL+E L +Y RLDG+ L R V DF EI V L+S +AG
Sbjct: 1438 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGG 1497
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 936
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K
Sbjct: 1498 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK 1553
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
+++QPK +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+
Sbjct: 822 EISQPK--------MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSIS 870
Query: 316 LI 317
++
Sbjct: 871 VM 872
>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=ino80 PE=3 SV=1
Length = 1690
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 75/116 (64%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+DL+E L +Y RLDG+ L R V DF EI V L+S +AG
Sbjct: 1419 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGG 1478
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 936
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K
Sbjct: 1479 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK 1534
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 262 VEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
+E + P +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+++
Sbjct: 806 IEISQP-SMLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSISVM 857
>sp|Q2UTQ9|INO80_ASPOR Putative DNA helicase ino80 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=ino80 PE=3 SV=1
Length = 1444
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 77/121 (63%)
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF EI V L+S
Sbjct: 1231 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLS 1290
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
+AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1291 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIR 1350
Query: 936 K 936
K
Sbjct: 1351 K 1351
>sp|Q6ZPV2|INO80_MOUSE DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=2 SV=2
Length = 1559
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++SQ TRM+DL+E + Y RLDG+ + R V DF T +I V L+S +AG
Sbjct: 1124 LIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGG 1183
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDD 940
LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL + T+E+RIL+ +
Sbjct: 1184 LGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKE 1243
Query: 941 K---RKMVASA 948
K ++MV S
Sbjct: 1244 KSEIQRMVISG 1254
>sp|Q9VDY1|INO80_DROME Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80 PE=1
SV=2
Length = 1638
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
Query: 819 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKA 878
+ +++SQ T+M+DL+E + +Y RLDG+ + AR V DF T +I V L+S +A
Sbjct: 1174 RVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRA 1233
Query: 879 GNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQ 938
G LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL + T+E+RIL+
Sbjct: 1234 GGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRA 1293
Query: 939 DDK---RKMVASA 948
+K ++MV S
Sbjct: 1294 REKSEIQRMVISG 1306
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80 PE=3
SV=1
Length = 1612
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 75/116 (64%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+DL+E L +Y RLDG+ L R V DF +I V L+S +AG
Sbjct: 1341 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGG 1400
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 936
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI K
Sbjct: 1401 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRK 1456
>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ino-80 PE=3 SV=3
Length = 1997
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+DL+E L +Y RLDG+ L R V DF T EI + L+S +AG
Sbjct: 1718 LLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQTRPEIFIFLLSTRAGG 1777
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILK 936
LG+N+ +A VI D WNPT + QA+DRAHR+GQT+ VTV RL R T+E+RI K
Sbjct: 1778 LGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRK 1833
Score = 34.7 bits (78), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
++ QPK LL+ L ++Q L W++ + ++ GILAD+ GLGKT+ I+
Sbjct: 1107 EIEQPK--------LLNCQLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTVQSIS 1155
Query: 316 LI 317
++
Sbjct: 1156 VM 1157
>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007
/ CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80
PE=3 SV=1
Length = 1707
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 77/121 (63%)
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF +I V L+S
Sbjct: 1434 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLS 1493
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
+AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1494 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIR 1553
Query: 936 K 936
K
Sbjct: 1554 K 1554
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 262 VEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
+E + P+ +L+ L ++Q L W++ + ++ GILAD+ GLGKTI I+++
Sbjct: 823 IEISQPN-MLTAKLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSISVM 874
>sp|Q1DUF9|INO80_COCIM Putative DNA helicase INO80 OS=Coccidioides immitis (strain RS)
GN=INO80 PE=3 SV=1
Length = 1662
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 77/121 (63%)
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF EI V L+S
Sbjct: 1395 GGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVSDFQQRPEIFVFLLS 1454
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
+AG LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL R T+E+RI
Sbjct: 1455 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIR 1514
Query: 936 K 936
K
Sbjct: 1515 K 1515
>sp|Q4IL82|INO80_GIBZE Putative DNA helicase INO80 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=INO80 PE=3 SV=1
Length = 1904
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
Query: 821 IVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKAGN 880
+++ Q TRM+D++E L +Y RLDG+ L R V DF T EI + L+S +AG
Sbjct: 1646 LLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGG 1705
Query: 881 LGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQDD 940
LG+N+ A VI D WNPT + QA+DRAHR+GQT+ VTV RL R T+E+RI K
Sbjct: 1706 LGINLTTADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQ 1765
Query: 941 KRKMVASAFGEDQGGGTA 958
K ++ QGGG +
Sbjct: 1766 KEEVQRVVI---QGGGAS 1780
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
++ QPK L++ L ++Q L W++ + ++ GILAD+ GLGKT+ I+
Sbjct: 1034 EIEQPK--------LINAQLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTVQSIS 1082
Query: 316 LI 317
++
Sbjct: 1083 VM 1084
>sp|C0H4W3|HEPF1_PLAF7 Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum
(isolate 3D7) GN=PF08_0048 PE=3 SV=1
Length = 2082
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 810 SKSPIEGPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREI 869
SK EG K ++F+Q+ +MLD++E LN + RLDG+ + R + V FN D+ I
Sbjct: 1778 SKCKREGN-KCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSI 1836
Query: 870 TVMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDT 929
+ + S ++G++G+N+ AA+ VI D WNP+ + QA+DR HRIGQT+ V V R T
Sbjct: 1837 FIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYT 1896
Query: 930 VEDRILKLQDDKRKM--VASAFGEDQGGGTASRLTVED 965
VE+ I K Q KRK+ + G T S++T D
Sbjct: 1897 VEENIWKKQLQKRKLDNICINMGNFNNSNTHSKITDTD 1934
Score = 37.4 bits (85), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 260 PKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIALI 317
P ++ATL D +Q L W+L ++ GILAD+ GLGKT+ I+L+
Sbjct: 656 PIIKATLRD---------YQHAGLHWLLYLYKNNI---NGILADEMGLGKTLQCISLL 701
>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
Length = 1944
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 77/121 (63%)
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
G + +++ Q TRM+DL+E L +Y RLDG+ R V DF T+ I V L+S
Sbjct: 1674 GGHRVLLYFQMTRMIDLMEEYLTYRNWKYCRLDGSTKFEDRRDTVHDFQTNPSIFVFLLS 1733
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
+AG LG+N+ +A VI D WNPT + QA+DRAHR+GQTR VTV RL R T+E+RI
Sbjct: 1734 TRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIR 1793
Query: 936 K 936
K
Sbjct: 1794 K 1794
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 256 DLNQPKVEATLPDGLLSVNLLKHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISIIA 315
++ QPK LL+ L ++Q L W++ + ++ GILAD+ GLGKTI I+
Sbjct: 1067 EIEQPK--------LLTATLKEYQLKGLNWLVNLYEQGIN---GILADEMGLGKTIQSIS 1115
Query: 316 LI 317
++
Sbjct: 1116 VM 1117
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 388 LVVCPASVLRQWARELEDKVPDKAALSVLIYHGGSRTKDPVEL------------AKYDV 435
LVV PAS L W +E++ VPD L ++ Y G + + + A++ V
Sbjct: 1131 LVVAPASTLHNWEQEIKRFVPD---LKIVPYWGSASDRKILRKFWDRKHSTYKRDAQFHV 1187
Query: 436 VLTTYSIVTNEV 447
+T+Y +V ++V
Sbjct: 1188 AITSYQMVVSDV 1199
>sp|Q9ULG1|INO80_HUMAN DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2
Length = 1556
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Query: 819 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMSLKA 878
+ +++SQ TRM+DL+E + Y RLDG+ + R V DF +I V L+S +A
Sbjct: 1119 RVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRA 1178
Query: 879 GNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKLQ 938
G LG+N+ AA VI D WNPT + QA+DRAHR+GQT+ VTV RL + T+E+RIL+
Sbjct: 1179 GGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRA 1238
Query: 939 DDK---RKMVASA 948
+K ++MV S
Sbjct: 1239 KEKSEIQRMVISG 1251
>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2
Length = 1673
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 77/121 (63%)
Query: 816 GPIKSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDREITVMLMS 875
G + +++ Q TRM+DL+E L +Y RLDG+ L R V DF +D I V L+S
Sbjct: 1414 GDHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDPTIFVFLLS 1473
Query: 876 LKAGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRIL 935
+AG LG+N+ +A VI D WNPT + QA+DRAHR+GQTR VTV RL T+E+RI
Sbjct: 1474 TRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITSGTIEERIR 1533
Query: 936 K 936
K
Sbjct: 1534 K 1534
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Query: 819 KSIVFSQWTRMLDLVENSLNQHCIQYRRLDGTMSLPARDRAVKDFNTDRE-ITVMLMSLK 877
K ++FSQWT++LD+++ ++ + R+DG++ L R R +KDF+ ++ ++ L+S +
Sbjct: 542 KVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTR 601
Query: 878 AGNLGLNMVAASHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIRDTVEDRILKL 937
AG LG+N+ AA IL D WNP + QA+DR HRIGQT+PV V RL+ ++E R+LK
Sbjct: 602 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKR 661
Query: 938 QDDKRKMVASAFGEDQ 953
K K+ G+ Q
Sbjct: 662 AYSKLKLEHVVIGQGQ 677
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357,859,127
Number of Sequences: 539616
Number of extensions: 15384765
Number of successful extensions: 32861
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 31051
Number of HSP's gapped (non-prelim): 1710
length of query: 972
length of database: 191,569,459
effective HSP length: 127
effective length of query: 845
effective length of database: 123,038,227
effective search space: 103967301815
effective search space used: 103967301815
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)