Query 002082
Match_columns 971
No_of_seqs 191 out of 401
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:35:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002082.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002082hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gjx_A Exportin-1; transport, 100.0 1.5E-30 5.1E-35 328.2 59.1 637 33-841 28-707 (1073)
2 4hat_C Exportin-1; heat repeat 100.0 3.7E-30 1.3E-34 326.3 61.3 640 21-841 11-681 (1023)
3 2x19_B Importin-13; nuclear tr 100.0 4.8E-29 1.6E-33 318.8 54.7 672 18-884 13-715 (963)
4 3ibv_A Exportin-T; karyopherin 100.0 1E-24 3.5E-29 276.3 64.1 675 21-885 1-732 (980)
5 3a6p_A Exportin-5; exportin-5, 100.0 1.2E-25 4.2E-30 291.6 53.8 692 23-875 1-796 (1204)
6 3m1i_C Exportin-1; heat repeat 100.0 5.8E-25 2E-29 283.3 57.8 638 33-840 16-680 (1049)
7 2x1g_F Cadmus; transport prote 100.0 8.3E-25 2.8E-29 279.9 53.6 689 23-884 1-723 (971)
8 4fdd_A Transportin-1; heat rep 99.6 3.9E-11 1.3E-15 151.1 48.1 152 22-186 6-161 (852)
9 1wa5_C Importin alpha RE-expor 99.5 5.6E-09 1.9E-13 133.2 57.5 143 33-185 5-155 (960)
10 2bpt_A Importin beta-1 subunit 99.2 1.5E-06 5E-11 108.9 53.5 190 33-255 4-211 (861)
11 1qgr_A Protein (importin beta 98.8 0.00028 9.5E-09 88.3 54.3 143 35-185 3-162 (876)
12 1ibr_B P95, importin beta-1 su 98.5 6.4E-07 2.2E-11 103.4 14.2 186 34-255 2-204 (462)
13 1u6g_C TIP120 protein, CAND1; 82.0 12 0.0004 48.4 15.4 145 33-186 6-167 (1230)
14 1x5b_A Signal transducing adap 72.6 43 0.0015 32.3 12.7 122 33-163 18-145 (163)
15 4hxt_A De novo protein OR329; 70.2 40 0.0014 33.8 12.8 136 35-182 4-157 (252)
16 1juq_A ADP-ribosylation factor 63.7 38 0.0013 33.0 10.3 64 33-96 16-82 (171)
17 2zu6_B Programmed cell death p 60.7 56 0.0019 35.0 11.8 117 20-144 157-278 (307)
18 3g2s_A C-terminal fragment of 57.8 1.1E+02 0.0036 29.1 12.0 99 33-135 14-122 (149)
19 3ldz_A STAM-1, signal transduc 56.5 88 0.003 29.2 11.1 97 33-135 8-110 (140)
20 3eiq_C Programmed cell death p 53.6 1.1E+02 0.0037 33.5 12.8 108 32-144 217-329 (358)
21 1elk_A Target of MYB1; superhe 48.7 74 0.0025 30.4 9.4 98 33-134 19-125 (157)
22 4db8_A Armadillo-repeat protei 48.5 95 0.0032 31.1 11.0 134 35-181 14-166 (252)
23 1wiz_A DNA-binding protein SAT 41.0 24 0.00084 31.1 4.0 81 10-109 1-92 (101)
24 1mhq_A ADP-ribosylation factor 40.1 2.4E+02 0.0082 26.5 11.4 97 34-134 5-111 (148)
25 2d5u_A N-glycanase 1; pngase, 37.1 36 0.0012 31.3 4.7 15 10-24 1-15 (124)
26 4db6_A Armadillo repeat protei 36.7 2.6E+02 0.0088 26.8 11.8 123 48-182 29-167 (210)
27 3ul1_B Importin subunit alpha- 35.1 2.4E+02 0.0082 32.0 12.7 100 35-139 59-172 (510)
28 2nsz_A Programmed cell death p 34.1 2.4E+02 0.0084 25.7 10.1 109 32-145 7-120 (129)
29 4fdd_B RNA-binding protein FUS 32.8 18 0.00062 23.9 1.3 14 11-24 2-15 (29)
30 4ffb_C Protein STU2; tubulin f 31.9 4.3E+02 0.015 27.0 17.8 107 74-187 65-173 (278)
31 2jdq_A Importin alpha-1 subuni 30.7 2.2E+02 0.0074 31.1 11.1 139 35-183 22-180 (450)
32 2ion_A PDCD4, programmed cell 30.4 2.8E+02 0.0097 26.1 10.1 109 32-145 9-122 (152)
33 3tpo_A Importin subunit alpha- 29.1 5.9E+02 0.02 28.7 14.8 169 713-908 304-495 (529)
34 2x1g_F Cadmus; transport prote 29.1 1.4E+02 0.0046 37.2 9.9 168 697-884 688-859 (971)
35 2x19_B Importin-13; nuclear tr 29.0 5.1E+02 0.018 31.7 15.3 167 697-885 680-848 (963)
36 3ibv_A Exportin-T; karyopherin 28.3 8E+02 0.027 30.4 16.7 201 696-908 695-922 (980)
37 1ug3_A EIF4GI, eukaryotic prot 26.2 4.6E+02 0.016 28.0 12.3 108 32-144 11-122 (339)
38 4b8j_A Importin subunit alpha- 25.6 4.4E+02 0.015 29.6 12.8 141 33-183 74-233 (528)
39 2vgl_A Adaptor protein complex 22.5 1.7E+02 0.0059 34.4 8.6 92 75-181 122-215 (621)
40 4g4s_P Proteasome assembly cha 20.7 70 0.0024 33.5 4.1 27 287-313 242-268 (269)
41 4fdd_A Transportin-1; heat rep 20.4 1.1E+03 0.039 28.0 31.4 131 48-185 338-474 (852)
No 1
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=100.00 E-value=1.5e-30 Score=328.20 Aligned_cols=637 Identities=13% Similarity=0.155 Sum_probs=414.1
Q ss_pred HHHHHHHHHhhCCCC--HHHHHHHHHHhhcCCChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Q 002082 33 HSIEIACSSIQMHVN--PAAAEATILGLCQSPQPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTADEKKSLIGF 110 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~lr~~ 110 (971)
++||+++.++|.|.+ |++|+++|.+|+++|++|..|..||++|++++++|||+++|++.|.++|..+++++|.+||++
T Consensus 28 ~~Le~lv~~ly~p~~~~r~qA~~~L~q~q~sp~aw~~~~~iL~~s~~~~vR~fAa~~L~~~I~~~W~~L~~e~~~~LR~~ 107 (1073)
T 3gjx_A 28 NLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKY 107 (1073)
T ss_dssp HHHHHHHHTTTCSSHHHHHHHHHHHHTSSCCSCHHHHHTCC---CCSHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhhCCHHHHHHHHHH
Confidence 789999999999854 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC-----ChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHHHHHHHHHhhhC
Q 002082 111 CLCFVMQHASS-----PEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFS 185 (971)
Q Consensus 111 ll~yl~~~~~~-----l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl~iL~~lv~Efs 185 (971)
+++|+.+...+ .++.+++|+++++|.|+|++|++. |+++++++.+.++ .++.++..++.+|..+.+|..
T Consensus 108 Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~----Wp~fi~dLv~~~~--~~~~~~~~~L~IL~~L~EEV~ 181 (1073)
T 3gjx_A 108 VVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKH----WPTFISDIVGASR--TSESLCQNNMVILKLLSEEVF 181 (1073)
T ss_dssp HHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTT----CTTHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCccccccchHHHHHHHHHHHHHHHHhChhh----ccHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHH
Confidence 99999985322 246778999999999999999984 9999999999997 478899999999999999976
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhcccccccCCCCCc
Q 002082 186 PSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLHQILNWDFQFDTSGRK 265 (971)
Q Consensus 186 ~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~~~LswdF~~~~~d~~ 265 (971)
..... .++-.+..+.+..++.. ++.||.++..+|+.. ....++..+|+++..+++|...+
T Consensus 182 d~~~~--~l~~~r~~~lk~~L~~~-~~~Il~ll~~iL~~~-----------~~~~lv~~~L~~L~~~~sWI~i~------ 241 (1073)
T 3gjx_A 182 DFSSG--QITQVKAKHLKDSMCNE-FSQIFQLCQFVMENS-----------QNAPLVHATLETLLRFLNWIPLG------ 241 (1073)
T ss_dssp TSHHH--HBCHHHHHHHHHHHHHT-CHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHTTTSCTH------
T ss_pred hcccc--cccHHHHHHHHHHHHHH-HHHHHHHHHHHhccc-----------CCHHHHHHHHHHHHHHHHhcCHH------
Confidence 43221 23455667789999765 899999887777531 23578899999999999999765
Q ss_pred ccccccccccccccCCCCCCcccccCCCccchHhhcccchHHHHH-HHHHHHHhccccCCCCCCccchHHHHHHHHHHhh
Q 002082 266 ISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALISSGHIVWLL-NLYSALRQKFSSEGYWLDCPIAVSARKLIVQLCS 344 (971)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~~~~l~llf-~ly~~~r~~~~~~~~~~~~~l~~~~l~cL~qLas 344 (971)
.+.+++++++++ .+ + + ++.+...|.+||.++.+
T Consensus 242 ---------------------------------~i~~~~ll~~L~~~~---L-~---------~~~~r~aA~dcL~eIv~ 275 (1073)
T 3gjx_A 242 ---------------------------------YIFETKLISTLIYKF---L-N---------VPMFRNVSLKCLTEIAG 275 (1073)
T ss_dssp ---------------------------------HHHSSSHHHHHHHHT---S-S---------SHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------HhccchHHHHHHHHh---c-C---------ChHHHHHHHHHHHHHHh
Confidence 566777888774 32 2 1 36789999999999999
Q ss_pred cccCccCCCChhhHHHHHHHHHHhhhhhcCChhhhHHHhhhCCCh-hhH-HHHHHHHHHHHhhcChhhHHHHhhccCchh
Q 002082 345 LTGTVFPSDNGKMQEHHLLQLLSGILEWVDPPDVVAQAIESGKSE-SEM-LDGCRALLSIATVTTPFVFDRLLKSIRPFG 422 (971)
Q Consensus 345 l~~~~f~~~~~~~r~~yl~~~l~~~~~il~~~~~~~~~~~~gl~~-~~~-~e~cr~L~rL~~~~~~~~~~~l~~~~~~~~ 422 (971)
.+.+ +....-.+.+..+++.+..+++......+++..|-.+ .++ ..+||.+..+..+|. .-+... ..
T Consensus 276 k~~~----~~~~~~~~lf~~~~~~i~~ilp~~~~l~~~y~~~~~~d~e~~~~l~~~f~~~~e~~~----~lIe~~---p~ 344 (1073)
T 3gjx_A 276 VSVS----QYEEQFETLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHG----QLLEKR---LN 344 (1073)
T ss_dssp SCSG----GGHHHHHHHHHHHHHHHHHHSCTTSCHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHH----HHHHHC---GG
T ss_pred cccc----chHHHHHHHHHHHHHHHHHhcCCchhHHHHHhccchhhHHHHHHHHHHHHHHHHHHH----HHHhcC---cc
Confidence 8532 1111223344555566667776655555555555432 344 357777777766662 112211 01
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCcchHHHHHHHHHHHHHhhhccc----ccCCCC---------CCChhhhhh---HHH
Q 002082 423 TLTLLSNLMCEVVKVLMMNNTEEGTWSWEARDILLDTWTTLLVSLD----STGRNV---------VLPLEVRNA---AAS 486 (971)
Q Consensus 423 ~l~~L~~lt~~~i~~~~~~~~~~~~~~~es~~~LL~~W~~lv~~~~----~~~~~~---------~~p~~l~~~---~~~ 486 (971)
+...+......++.. +..+ -.|.+.+++++|..|.+.+- +..+.. .+|.....| ..+
T Consensus 345 ~~~~l~~~l~~ll~~----s~~~---d~ei~kitf~fW~~L~~~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~ 417 (1073)
T 3gjx_A 345 LREALMEALHYMLLV----SEVE---ETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSK 417 (1073)
T ss_dssp GHHHHHHHHHHHHHH----TTCS---CHHHHHHHHHHHHHHHHHHHHHCCSCCCCSSCTTSSCCSCSCHHHHTTHHHHHH
T ss_pred chHHHHHHHHHHHHH----hCCC---cHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhHHHHHHHHHHH
Confidence 111111111011111 1112 35999999999999988642 110000 012211111 223
Q ss_pred HHHHHHHhccccccccccCCCCcccch-----hcc-HhHHHHHHHHHHHHHHhcHhhhHHHHHHHHHHHHHHHhcccCCC
Q 002082 487 LFALIVESELKVASASAMDDNGEFNYL-----QAS-ISAMDERLSSYALIARAAIDATVPLLTRLFSERFARLHQGRGMI 560 (971)
Q Consensus 487 I~~~Yi~srL~~~~~~~~~d~e~de~~-----~~d-~~~~~eqL~~ia~l~R~~~~~t~~lL~~l~~~~~~~l~~~~~~~ 560 (971)
+... +-+||..|+.....|+|..|-. +.| ...|+-.=+++..+....++.+...+.+.+.+..+ + .
T Consensus 418 L~~v-lI~~m~~P~ev~i~e~e~ge~~re~~~d~~~~~ly~~mrd~L~~lt~l~~~~~~~i~~~~l~~~~~------~-~ 489 (1073)
T 3gjx_A 418 VRLL-MVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKLQNQVN------G-T 489 (1073)
T ss_dssp HHHH-HHHTCCCSCCEEEEECSSSCEEEEECSSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHT------S-C
T ss_pred HHHH-HHHhcCCCccccccCcccchHHHHHHhhcchHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc------C-C
Confidence 3333 4588998875433232222211 112 12333333444666777788888877776664321 1 1
Q ss_pred CC-chhHHHHHHHHHHHHhHhccCCCCCcccCchhhhhhhhhhhhcccchHHHHHHHHHHHHHhhcCccccccCCCHHHH
Q 002082 561 DP-TETLEELYSLLLITGHVLADEGEGEIPVVPNAIQTHFVDTIEAAKHPVVLLCGSIIKFAEWSLDPEARASVFSPRLM 639 (971)
Q Consensus 561 ~~-~~~~E~L~WLv~i~g~~lad~~~ge~~~ip~~i~~~~~~~~~~~~d~vv~Lv~~l~~l~~~~l~~~~~~~~~Sp~L~ 639 (971)
.+ -..+|.+-|-+ |++- +. +.|+. ....+..++..++++++..-. .--.+.+.
T Consensus 490 ~~sW~~lea~~~ai---gaIa-g~------~~~~~-----------E~~~Lp~vi~~Ll~L~e~~~~-----kd~k~~va 543 (1073)
T 3gjx_A 490 EWSWKNLNTLCWAI---GSIS-GA------MHEED-----------EKRFLVTVIKDLLGLCEQKRG-----KDNKAIIA 543 (1073)
T ss_dssp CCCHHHHHHHHHHH---HHTT-TS------SCHHH-----------HHHHHHHHHHHHHHHHHHSCS-----HHHHHHHH
T ss_pred CCCHHHHhHHHHHH---HHHH-Cc------CCccc-----------ccchHHHHHHHHhcccccccc-----cchhHHHH
Confidence 22 14455666655 3332 11 11110 011233455666777654211 00124667
Q ss_pred HHHHHHHHHHHHhccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCCCchhHHHHHHHHHHHhccCCCCchhHH
Q 002082 640 EAIVWFLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDIIVRISMTTLVSYPGEKDLQ 719 (971)
Q Consensus 640 ~a~lwfl~~~~~~Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~~~~~vl~~iv~ki~~nL~~w~~e~~v~ 719 (971)
.+++|.++|+. - ++.. +...|..+++|++.-+. ...+.|.
T Consensus 544 s~i~~vlgrY~-~------------------------------wl~~-------h~~~L~~vl~~L~~~m~--~~~~~vq 583 (1073)
T 3gjx_A 544 SNIMYIVGQYP-R------------------------------FLRA-------HWKFLKTVVNKLFEFMH--ETHDGVQ 583 (1073)
T ss_dssp HHHHHHHHHCH-H------------------------------HHHH-------CHHHHHHHHHHHHHHTT--CCSTTHH
T ss_pred HHHHHHHhhhH-H------------------------------HHHh-------CHHHHHHHHHHHHHHHh--cCCHHHH
Confidence 77788877652 1 2221 11234445555554332 2466888
Q ss_pred HHHHHHHHHHHhccccchhhHHc------chHHHHHHHHhhccccccccCchhhHHHHHHHHHHHhcCCCchhhHHHHHH
Q 002082 720 ELTCNQLLHALVRRKNVCVHLVA------LGSWRELASAFANDKTLILLNSTNQRSLAQTLVLSAYGMRNSESSNQYVRD 793 (971)
Q Consensus 720 ~~t~~~LL~~L~~~~~~~~~l~~------l~~~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f~~ 793 (971)
..++ +-|..++..... .++. .|....+...+.+ -+.+++++....||.+++.++.+.++...+.+++..
T Consensus 584 ~aA~-~af~~i~~~C~~--~lv~~~~~e~~p~i~~il~~~~~--~~~~l~~~~~~~lyeav~~vi~~~p~~~~~~~~i~~ 658 (1073)
T 3gjx_A 584 DMAC-DTFIKIAQKCRR--HFVQVQVGEVMPFIDEILNNINT--IICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEK 658 (1073)
T ss_dssp HHHH-HHHHHHHHHTGG--GGTSCCTTCSSCHHHHHHTSHHH--HHTTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHH--HHhhccccccchHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHHHHhCCCcchHHHHHHH
Confidence 8888 888888875321 1222 2455666665532 245678888889999999999877776667889999
Q ss_pred HHHHHHHHHHHHhC----CCCcccccChhhHHHHHHHHHHHhhchhhccCcC
Q 002082 794 LTRHATAYLVELSG----KNDLKNVSQQPDIILLVSCLLERLRGAANATEPR 841 (971)
Q Consensus 794 ~l~pl~~~~~~l~~----~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~ 841 (971)
+|.|..++++++.+ +++ ...+++....+..++++...+|.|....
T Consensus 659 Lm~~~~~~w~~l~~~~~~~~~---~~~d~~~i~~l~~il~~n~~v~~~~g~~ 707 (1073)
T 3gjx_A 659 YMLLPNQVWDSIIQQATKNVD---ILKDPETVKQLGSILKTNVRACKAVGHP 707 (1073)
T ss_dssp HTHHHHHHHHHHHHHHHHCGG---GGGCHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHhhcCch---hccChHHHHHHHHHHhhhHHHHhhcchh
Confidence 99999999999985 332 3345666678999999999888877654
No 2
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=100.00 E-value=3.7e-30 Score=326.30 Aligned_cols=640 Identities=11% Similarity=0.154 Sum_probs=423.2
Q ss_pred CCCChHhHHHHHHHHHHHHHHhhCCCC--HHHHHHHHHHhhcCCChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCC
Q 002082 21 GPADLAKLQSIMHSIEIACSSIQMHVN--PAAAEATILGLCQSPQPYKACQFILENSQVANARFQAAAAIRDAAMREWSF 98 (971)
Q Consensus 21 ~~md~~~l~~~~~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~ 98 (971)
++|| + ++||++++.+|.|.+ |++|+++|.+|+++|++|..|..||+++++++++|||+++|++.|.++|..
T Consensus 11 ~~~d---v----~~Le~av~~ly~p~~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~s~~~~vR~faa~~Lk~~I~~~W~~ 83 (1023)
T 4hat_C 11 NDLD---I----ALLDQVVSTFYQGSGVQQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSILDKLITRKWKL 83 (1023)
T ss_dssp SCCC---H----HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCTTGGGGHHHHHHHCCCHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCCC---H----HHHHHHHHHHhCCChHHHHHHHHHHHHHHcCccHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 5677 5 778999999999865 899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCC-----hhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHH
Q 002082 99 LTADEKKSLIGFCLCFVMQHASSP-----EGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIG 173 (971)
Q Consensus 99 l~~~~k~~lr~~ll~yl~~~~~~l-----~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~ig 173 (971)
+++++|..||+++++++.+..++. +++|++|++++++.|+|++|++. |+++++++.+.++ .++.++..+
T Consensus 84 L~~e~~~~Ir~~Ll~~l~~~~~~~~~i~~~~~i~nKLa~~la~I~~~~~p~~----Wp~~l~dL~~~l~--~~~~~~~~~ 157 (1023)
T 4hat_C 84 LPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQN----WPEFIPELIGSSS--SSVNVCENN 157 (1023)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHHHHHHHTTTT----CTTHHHHHHHHTT--TCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCcccccccHHHHHHHHHHHHHHHHHhChhh----chHHHHHHHHHhc--CCHHHHHHH
Confidence 999999999999999998864222 58999999999999999999984 9999999999997 477889999
Q ss_pred HHHHHHHHhhhCCCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhc
Q 002082 174 INFLESLVSEFSPSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLHQIL 253 (971)
Q Consensus 174 l~iL~~lv~Efs~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~~~L 253 (971)
+.+|..+.+|....... .++-.++++.+..++.. ++.||.++.++|... ....++..+|+++..++
T Consensus 158 L~iL~~L~EEV~~~~~~--~l~~~r~~~lk~~l~~~-~~~I~~ll~~iL~~~-----------~~~~l~~~~L~~l~s~l 223 (1023)
T 4hat_C 158 MIVLKLLSEEVFDFSAE--QMTQAKALHLKNSMSKE-FEQIFKLCFQVLEQG-----------ASSSLIVATLESLLRYL 223 (1023)
T ss_dssp HHHHHHHHHHHHTSCTT--TSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHC-----------SSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhc--cchHHHHHHHHHHHHHH-HHHHHHHHHHHHhCC-----------CCHHHHHHHHHHHHHHH
Confidence 99999999996542211 45667788889999765 899999988888641 23467889999999999
Q ss_pred ccccccCCCCCcccccccccccccccCCCCCCcccccCCCccchHhhcccchHHHHHHHHHHHHhccccCCCCCCccchH
Q 002082 254 NWDFQFDTSGRKISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALISSGHIVWLLNLYSALRQKFSSEGYWLDCPIAV 333 (971)
Q Consensus 254 swdF~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~~~~l~llf~ly~~~r~~~~~~~~~~~~~l~~ 333 (971)
+|...+ .+.++.+++++|+.+ + . ++.+..
T Consensus 224 ~WI~i~---------------------------------------~i~~~~ll~~l~~~~--L-~---------~~~~r~ 252 (1023)
T 4hat_C 224 HWIPYR---------------------------------------YIYETNILELLSTKF--M-T---------SPDTRA 252 (1023)
T ss_dssp TTSCTH---------------------------------------HHHSSSHHHHHHTHH--H-H---------SHHHHH
T ss_pred HhCCHH---------------------------------------HhcchhHHHHHHHHH--c-C---------CHHHHH
Confidence 997765 456677899988332 2 1 267899
Q ss_pred HHHHHHHHHhhcccCccCCCChhhHHHHHHHHHHh----h-hhhcCChhhhHHHhhhCCC-hhhH-HHHHHHHHHHHhhc
Q 002082 334 SARKLIVQLCSLTGTVFPSDNGKMQEHHLLQLLSG----I-LEWVDPPDVVAQAIESGKS-ESEM-LDGCRALLSIATVT 406 (971)
Q Consensus 334 ~~l~cL~qLasl~~~~f~~~~~~~r~~yl~~~l~~----~-~~il~~~~~~~~~~~~gl~-~~~~-~e~cr~L~rL~~~~ 406 (971)
.|.+||.++.+.+.+ ++.. ...+.+..++.. + ..+++......+++..|-. +.++ ..+||++..+...|
T Consensus 253 ~A~ecL~eIv~~~~~--~~~~--~~~~~l~~lf~~~l~~l~~~i~p~~~~l~~~~~~~~~~D~e~~~~l~~l~~~~~e~~ 328 (1023)
T 4hat_C 253 ITLKCLTEVSNLKIP--QDND--LIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARN 328 (1023)
T ss_dssp HHHHHHHHHHTSCCC--SSCH--HHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccC--CchH--HHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999986531 1110 122345544444 3 3444444444444545542 3444 36888887777666
Q ss_pred ChhhHHHHhhccCchhHHHHHHHHHHHHHHHHhhhhcccCcchHHHHHHHHHHHHHhhhcccccCCCCCCChhhhhhHHH
Q 002082 407 TPFVFDRLLKSIRPFGTLTLLSNLMCEVVKVLMMNNTEEGTWSWEARDILLDTWTTLLVSLDSTGRNVVLPLEVRNAAAS 486 (971)
Q Consensus 407 ~~~~~~~l~~~~~~~~~l~~L~~lt~~~i~~~~~~~~~~~~~~~es~~~LL~~W~~lv~~~~~~~~~~~~p~~l~~~~~~ 486 (971)
. .++.. ...+...+..+...++.. + ..+ -.+.+..++++|..+.+++ |. ..........+..+
T Consensus 329 ~-----~li~~--~~~~~~~l~~~l~~Ll~~-~---~~~---d~ei~~~tl~FW~~L~~~l-~~--e~~~~~~~~~~~~~ 391 (1023)
T 4hat_C 329 R-----ALLES--DESLRELLLNAHQYLIQL-S---KIE---ERELFKTTLDYWHNLVADL-FY--EPLKKHIYEEICSQ 391 (1023)
T ss_dssp G-----GGGTS--CGGGHHHHHHHHHHHHHH-T---TSS---CHHHHHHHHHHHHHHHHHH-TT--STTTGGGGHHHHHH
T ss_pred H-----HHHhC--CcchhHHHHHHHHHHHHh-h---CCC---cHHHHHHHHHHHHHHHHHH-Hh--chHHHHHHHHHHHH
Confidence 3 12211 011122221111112221 1 111 2488999999999999853 21 10011122233456
Q ss_pred HHHHHHHhccccccccc--cCC-CCc-ccc--hhccHhHHHHHHHHHHHHHHhcHhhhHHHHHHHHHHHHHHHhcccCCC
Q 002082 487 LFALIVESELKVASASA--MDD-NGE-FNY--LQASISAMDERLSSYALIARAAIDATVPLLTRLFSERFARLHQGRGMI 560 (971)
Q Consensus 487 I~~~Yi~srL~~~~~~~--~~d-~e~-de~--~~~d~~~~~eqL~~ia~l~R~~~~~t~~lL~~l~~~~~~~l~~~~~~~ 560 (971)
+... +-.|+..|+... .+| ++. +|. ..|+.+.|++-=+++..++.+.+..+.+.+.+.+.+.+. ++
T Consensus 392 L~~v-li~km~~P~e~~ive~d~~~~~~e~~~d~d~~~~f~~~Rd~L~~l~~l~~~~~~~~~~~~l~~~l~------~~- 463 (1023)
T 4hat_C 392 LRLV-IIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQID------GS- 463 (1023)
T ss_dssp HHHH-HHHSCCCCTTCCEEECTTSCEEECSSCCGGGHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHS------ST-
T ss_pred HHHH-HHHhcCCCcccccCCCCCccHHHHhccchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhc------CC-
Confidence 6666 345677776321 111 111 111 112344554433777888888888888887777764431 11
Q ss_pred CCchhHHHHHHHHHHHHhHhccCCC-CCcccCchhhhhhhhhhhhcccchHHHHHHHHHHHHHhhcCccccccCCCHHHH
Q 002082 561 DPTETLEELYSLLLITGHVLADEGE-GEIPVVPNAIQTHFVDTIEAAKHPVVLLCGSIIKFAEWSLDPEARASVFSPRLM 639 (971)
Q Consensus 561 ~~~~~~E~L~WLv~i~g~~lad~~~-ge~~~ip~~i~~~~~~~~~~~~d~vv~Lv~~l~~l~~~~l~~~~~~~~~Sp~L~ 639 (971)
++ -++.+-=.++..|++.+...+ ++.+. +..++..+++++...- . ..-++.+.
T Consensus 464 ~~--~W~~~EA~~~a~gaIa~~~~~~~e~~~-------------------l~~vi~~Ll~l~~~~~---~--~d~k~~v~ 517 (1023)
T 4hat_C 464 EW--SWHNINTLSWAIGSISGTMSEDTEKRF-------------------VVTVIKDLLDLCVKKR---G--KDNKAVVA 517 (1023)
T ss_dssp TC--CHHHHHHHHHHHHHTTTSSCHHHHHHH-------------------HHHHHHHHHHHHHHCC---S--HHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHHHHcCCCchhHHHH-------------------HHHHHHHHHHhhhccc---c--CcchHHHH
Confidence 11 133444455566776533211 12222 2234445566654320 1 11336777
Q ss_pred HHHHHHHHHHHHhccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCCCchhHHHHHHHHHHHhccCCCCchhHH
Q 002082 640 EAIVWFLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDIIVRISMTTLVSYPGEKDLQ 719 (971)
Q Consensus 640 ~a~lwfl~~~~~~Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~~~~~vl~~iv~ki~~nL~~w~~e~~v~ 719 (971)
.+.+|.++|+.. |+. . ....|.-+++++..-+. ...+.|.
T Consensus 518 ~t~~~~lGry~~-wl~---~----------------------------------~~~~L~~vl~~L~~~l~--~~~~~v~ 557 (1023)
T 4hat_C 518 SDIMYVVGQYPR-FLK---A----------------------------------HWNFLRTVILKLFEFMH--ETHEGVQ 557 (1023)
T ss_dssp HHHHHHHHTCHH-HHH---H----------------------------------CHHHHHHHHHHHHHHTT--CSCHHHH
T ss_pred HHHHHHHHHHHH-HHh---c----------------------------------cHHHHHHHHHHHHHHhh--cCCHHHH
Confidence 889999987733 332 1 00123334444444331 1235788
Q ss_pred HHHHHHHHHHHhccccchhhHHc------chHHHHHHHHhhccccccccCchhhHHHHHHHHHHHhcCCCchhhHHHHHH
Q 002082 720 ELTCNQLLHALVRRKNVCVHLVA------LGSWRELASAFANDKTLILLNSTNQRSLAQTLVLSAYGMRNSESSNQYVRD 793 (971)
Q Consensus 720 ~~t~~~LL~~L~~~~~~~~~l~~------l~~~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f~~ 793 (971)
..+| .-|..++.... ..+.. .|.+..+...+.. -+.+++++.+..+|++++.++.+.++.+.+.+++..
T Consensus 558 ~~A~-~al~~l~~~c~--~~l~~~~~~e~~p~~~~il~~l~~--~~~~l~~~~~~~lyeai~~vi~~~~~~~~~~~~l~~ 632 (1023)
T 4hat_C 558 DMAC-DTFIKIVQKCK--YHFVIQQPRESEPFIQTIIRDIQK--TTADLQPQQVHTFYKACGIIISEERSVAERNRLLSD 632 (1023)
T ss_dssp HHHH-HHHHHHHHHHT--HHHHSCCTTCSSCHHHHHHHTHHH--HHTTSCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHH--HHhhccCCCCCchhHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCCCHhhHHHHHHH
Confidence 8888 88888887621 22332 4567777766532 234567778888999999999887776668889999
Q ss_pred HHHHHHHHHHHHhC----CCCcccccChhhHHHHHHHHHHHhhchhhccCcC
Q 002082 794 LTRHATAYLVELSG----KNDLKNVSQQPDIILLVSCLLERLRGAANATEPR 841 (971)
Q Consensus 794 ~l~pl~~~~~~l~~----~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~ 841 (971)
+|.|+..++.++.+ +|+ ...+++....+.-+|+++..++.+....
T Consensus 633 L~~~~~~~~~~l~~~~~~~~~---~~~d~~~~~~l~~il~~~~~v~~~lg~~ 681 (1023)
T 4hat_C 633 LMQLPNMAWDTIVEQSTANPT---LLLDSETVKIIANIIKTNVAVCTSMGAD 681 (1023)
T ss_dssp HTHHHHHHHHHHHHHHHHCTT---GGGCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHhHHHHHHHHHHHHhcCch---hhcCHHHHHHHHHHHHHHHHHHHHhcHH
Confidence 99999999999984 332 2334566677899999999888887653
No 3
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=100.00 E-value=4.8e-29 Score=318.82 Aligned_cols=672 Identities=14% Similarity=0.101 Sum_probs=423.0
Q ss_pred CCCCCCChHhHHHHHHHHHHHHHHhhCCCC---HHHHHHHHHHhhcCCChHHHHHHHHhcCCchhHHHHHHHHHHHHHhh
Q 002082 18 GGGGPADLAKLQSIMHSIEIACSSIQMHVN---PAAAEATILGLCQSPQPYKACQFILENSQVANARFQAAAAIRDAAMR 94 (971)
Q Consensus 18 ~~~~~md~~~l~~~~~~lE~~~~~ly~~~~---r~~Ae~~L~~f~~~~~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~ 94 (971)
.|+.+||..++ ++++++++.+|.+++ |++||++|.+|+++|++|..|..||+++.+++++|+|+.+|++.|.+
T Consensus 13 ~~~~~m~~~~~----~~l~~~l~~l~~~~~~~~r~~A~~~L~~~~~~p~~~~~~~~lL~~~~~~~vr~~aa~~L~~~i~~ 88 (963)
T 2x19_B 13 AGAAPALDFTV----ENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQYFGASALHIKISR 88 (963)
T ss_dssp -----CCCCCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSTTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCHhhH----HHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHh
Confidence 34457888788 899999999886554 89999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccC----CChhHH
Q 002082 95 EWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGI----HGVDTQ 170 (971)
Q Consensus 95 ~W~~l~~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~----~~~~~~ 170 (971)
+|..+++++|..||++|++++.+.. +.+++|+++++.+++.|+|++|++. |+++++++.+.+++. .++.++
T Consensus 89 ~w~~l~~~~~~~ir~~ll~~l~~~~-~~~~~ir~kl~~~la~i~~~~~p~~----Wp~~l~~l~~~~~~~~~~~~~~~~~ 163 (963)
T 2x19_B 89 YWSDIPTDQYESLKAQLFTQITRFA-SGSKIVLTRLCVALASLALSMMPDA----WPCAVADMVRLFQAEDSPVDGQGRC 163 (963)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHHTTTT----STTHHHHHHHHHCC------CHHHH
T ss_pred CHHhCCHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhCccc----cchHHHHHHHHHhhhccCCCcHHHH
Confidence 9999999999999999999999865 4579999999999999999999874 889999999998631 155688
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHH
Q 002082 171 FIGINFLESLVSEFSPSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLH 250 (971)
Q Consensus 171 ~igl~iL~~lv~Efs~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~ 250 (971)
..++.+|..+.+|....+- +..++.+++..++. .++.|+.++.+++... .+ ...+...+|+++
T Consensus 164 ~~~l~iL~~l~ee~~~~~~-----~~~~r~~~~~~l~~-~~~~i~~ll~~~l~~~-------~~---~~~~~~~~l~~l- 226 (963)
T 2x19_B 164 LALLELLTVLPEEFQTSRL-----PQYRKGLVRTSLAV-ECGAVFPLLEQLLQQP-------SS---PSCVRQKVLKCF- 226 (963)
T ss_dssp HHHHHHHHHHHHHHTTCCC--------------CCSGG-GHHHHHHHHHHHHSCT-------TC---CHHHHHHHHHHH-
T ss_pred HHHHHHHHhCHHHHhcccC-----cHHHHHHHHHHHHH-HHHHHHHHHHHHHhCC-------CC---chHHHHHHHHHH-
Confidence 9999999999998864321 22233344555544 4778887766665311 11 123666666655
Q ss_pred HhcccccccCCCCCcccccccccccccccCCCCCCcccccCCCccchHhhcccchHHHHHHHHHHHHhccccCCCCCCcc
Q 002082 251 QILNWDFQFDTSGRKISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALISSGHIVWLLNLYSALRQKFSSEGYWLDCP 330 (971)
Q Consensus 251 ~~LswdF~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~~~~l~llf~ly~~~r~~~~~~~~~~~~~ 330 (971)
.+|...+.. ...++.+++.+|+.. . +++
T Consensus 227 --~~wi~~~~~-------------------------------------~~~~~~ll~~l~~~l----~---------~~~ 254 (963)
T 2x19_B 227 --SSWVQLEVP-------------------------------------LQDCEALIQAAFAAL----Q---------DSE 254 (963)
T ss_dssp --HHHHTSSCC-------------------------------------GGGTHHHHHHHHHHT----T---------STT
T ss_pred --HHHHcCCCC-------------------------------------cccchHHHHHHHHHh----C---------Cch
Confidence 468764321 112345677777653 1 377
Q ss_pred chHHHHHHHHHHhhcccCccCCCChhhHHHHHHHHHHhhhhhcCChhhhHHHhhhCCChhhHHHHHHHHHHHHhhcChhh
Q 002082 331 IAVSARKLIVQLCSLTGTVFPSDNGKMQEHHLLQLLSGILEWVDPPDVVAQAIESGKSESEMLDGCRALLSIATVTTPFV 410 (971)
Q Consensus 331 l~~~~l~cL~qLasl~~~~f~~~~~~~r~~yl~~~l~~~~~il~~~~~~~~~~~~gl~~~~~~e~cr~L~rL~~~~~~~~ 410 (971)
+...+++|+.++.+.+.+ + .+..++..++.++...+.. ...++.. -+.+.+..+|+++.++.+.++ ..
T Consensus 255 ~~~~a~~~l~~i~~~~~~--~-----~~~~~~~~l~~~~~~~~~~---~~~~~~~-~d~~~~~~~~~l~~~~~~~~~-~~ 322 (963)
T 2x19_B 255 LFDSSVEAIVNAISQPDA--Q-----RYVNTLLKLIPLVLGLQEQ---LRQAVQN-GDMETSHGICRIAVALGENHS-RA 322 (963)
T ss_dssp THHHHHHHHHHHHTCTTG--G-----GCHHHHHHHHHHHHTTHHH---HHHHHHT-TCHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHccccc--c-----cCHHHHHHHHHHHHhhHHH---HHHHHHC-CCHHHHHHHHHHHHHHHHHhH-HH
Confidence 999999999999986432 1 2345777777766555321 1111111 133677889999999887763 11
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHHHHhhh-h--cccCcchHHHHHHHHHHHHHhhhcccccCCC--CCCChhhhhhHH
Q 002082 411 FDRLLKSIRPFGTLTLLSNLMCEVVKVLMMN-N--TEEGTWSWEARDILLDTWTTLLVSLDSTGRN--VVLPLEVRNAAA 485 (971)
Q Consensus 411 ~~~l~~~~~~~~~l~~L~~lt~~~i~~~~~~-~--~~~~~~~~es~~~LL~~W~~lv~~~~~~~~~--~~~p~~l~~~~~ 485 (971)
+.. ... ....+..++..++. .+.. . ..++ +....++++|..+++.......+ .........+..
T Consensus 323 l~~---~~~---~~~~~~~~l~~ll~-~~~~~~~~~~~~----~v~~~~l~fw~~l~~~~~~~~~~~~~~~~~~~~~~l~ 391 (963)
T 2x19_B 323 LLD---QVE---HWQSFLALVNMIMF-CTGIPGHYPVNE----TTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYF 391 (963)
T ss_dssp HHH---CGG---GHHHHHHHHHHHHH-HHTCSSCTTTTC----GGGGGGHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHc---Ccc---chHHHHHHHHHHHH-HHcCCCCCCchh----hhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 211 000 00112222222222 2211 1 0122 23678899999998854321100 000011123344
Q ss_pred HHHHHHHHhccccccccccCCCCcccchhccHh-HHHHHHHHHHHHHHhcHhhhHHHHHHHHHHHHHHHhcccCCCCCch
Q 002082 486 SLFALIVESELKVASASAMDDNGEFNYLQASIS-AMDERLSSYALIARAAIDATVPLLTRLFSERFARLHQGRGMIDPTE 564 (971)
Q Consensus 486 ~I~~~Yi~srL~~~~~~~~~d~e~de~~~~d~~-~~~eqL~~ia~l~R~~~~~t~~lL~~l~~~~~~~l~~~~~~~~~~~ 564 (971)
+|....+. ++..++....++ ++++++++.. ...+--+.+-.+++..+..+++.+.+.+.+.+++| ..+ ..
T Consensus 392 ~l~~~ll~-~~~~p~~~~~~~--~~~de~~~~~~~r~~~~~~L~~~~~~~~~~~l~~~~~~l~~~l~~~---~~~---~~ 462 (963)
T 2x19_B 392 QLVDVLLH-KAQFPSDEEYGF--WSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSS---EEP---YS 462 (963)
T ss_dssp HHHHHHHH-HHSCCCHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTC---CCS---CC
T ss_pred HHHHHHHH-HHcCCCcccccC--CChhHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhc---CCC---Cc
Confidence 55555443 343322211111 1122222222 23444566677778888888888888888777655 111 11
Q ss_pred hHHHHHHHHHHHHhHhccCCCCCcccCchhhhhhhhhhhhcccchHHHHHHHHHHHHHhhcCccccccCCCHHHHHHHHH
Q 002082 565 TLEELYSLLLITGHVLADEGEGEIPVVPNAIQTHFVDTIEAAKHPVVLLCGSIIKFAEWSLDPEARASVFSPRLMEAIVW 644 (971)
Q Consensus 565 ~~E~L~WLv~i~g~~lad~~~ge~~~ip~~i~~~~~~~~~~~~d~vv~Lv~~l~~l~~~~l~~~~~~~~~Sp~L~~a~lw 644 (971)
+.+..=.++..|++...-.+++.+. + ..++.... .+. . -+|.+..+.+|
T Consensus 463 -w~~~eaal~al~~i~~~~~~~~~~~-------------------l----~~l~~~l~-~l~-----~-~~~~vr~~~~~ 511 (963)
T 2x19_B 463 -WQHTEALLYGFQSIAETIDVNYSDV-------------------V----PGLIGLIP-RIS-----I-SNVQLADTVMF 511 (963)
T ss_dssp -HHHHHHHHHHHHHHTTSCCSSCCSH-------------------H----HHHHHHGG-GSC-----C-CSHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHhhcCchhhHH-------------------H----HHHHHHHH-hCC-----C-CcHHHHHHHHH
Confidence 2223334666666543322222111 1 12333211 111 1 26899999999
Q ss_pred HHHHHHHhccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCCCchhHHHHHHHHHHHhccCCCCchhHHHHHHH
Q 002082 645 FLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDIIVRISMTTLVSYPGEKDLQELTCN 724 (971)
Q Consensus 645 fl~~~~~~Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~~~~~vl~~iv~ki~~nL~~w~~e~~v~~~t~~ 724 (971)
++++|+. |+..+ + ..+.-+++++...|.. ++|...++
T Consensus 512 ~l~~~~~-~l~~~------------------------~-------------~~l~~vl~~l~~~l~~----~~V~~~A~- 548 (963)
T 2x19_B 512 TIGALSE-WLADH------------------------P-------------VMINSVLPLVLHALGN----PELSVSSV- 548 (963)
T ss_dssp HHHHTHH-HHHHC------------------------H-------------HHHTTTHHHHHHHTTC----GGGHHHHH-
T ss_pred HHHHHHH-HHHhC------------------------H-------------HHHHHHHHHHHHHhCC----chHHHHHH-
Confidence 9999963 44210 0 1222345555666643 67888888
Q ss_pred HHHHHHhccccchhhHHcchHHHHHHHHhhccccccccCchhhHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHH
Q 002082 725 QLLHALVRRKNVCVHLVALGSWRELASAFANDKTLILLNSTNQRSLAQTLVLSAYGMRNSESSNQYVRDLTRHATAYLVE 804 (971)
Q Consensus 725 ~LL~~L~~~~~~~~~l~~l~~~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f~~~l~pl~~~~~~ 804 (971)
..|..+++... ..+ .|.+..++.....--.-..++...+..+|++++.++.+.+ .+....|+..+|.|+..++.+
T Consensus 549 ~al~~l~~~~~--~~l--~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~-~~~~~~~~~~l~~~l~~~l~~ 623 (963)
T 2x19_B 549 STLKKICRECK--YDL--PPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQ-VEEILKNLHSLISPYIQQLEK 623 (963)
T ss_dssp HHHHHHHHHTG--GGC--TTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHH--HhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 89999987532 111 2555555544311000002345677789999999987554 456788999999999999999
Q ss_pred HhCCCCcccccChhhHHHHHHHHHHHhhchhhccCcC-c-----------------HHHHHHHHHhhhHHHHHHHHhhcC
Q 002082 805 LSGKNDLKNVSQQPDIILLVSCLLERLRGAANATEPR-T-----------------QKAIYEMGFSVMNPVLLLLEVYKH 866 (971)
Q Consensus 805 l~~~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~-s-----------------~~~lf~~l~~~l~~l~~l~~~y~~ 866 (971)
+.+++. +++.+..+...++++.+++++.... . ...+...+...++.+.++++.|.+
T Consensus 624 ~~~~~~------~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 697 (963)
T 2x19_B 624 LAEEIP------NPSNKLAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSKWLN 697 (963)
T ss_dssp HHSSCS------CHHHHHHHHHHHHHHHHHHHHCCSSCCC---------------CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhCCC------CHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccccCCCCCCCCchHHHHHHHHHHHHHHHHhccC
Confidence 876531 4566677888999999999887643 1 123555666778999999999999
Q ss_pred ChHHHHHHHHHHHHHHhc
Q 002082 867 ESAVVYLLLKFVVDWVDG 884 (971)
Q Consensus 867 ~p~Vv~~iLkf~~elv~n 884 (971)
++++...+.+++..++..
T Consensus 698 ~~~v~e~~~~~l~~~~~~ 715 (963)
T 2x19_B 698 DAQVVEAVCAIFEKSVKT 715 (963)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHh
Confidence 999999999999998754
No 4
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=99.96 E-value=1e-24 Score=276.32 Aligned_cols=675 Identities=11% Similarity=0.083 Sum_probs=418.8
Q ss_pred CCCChHhHHHHHHHHHHHHHHhhCCC-C---HHHHHHHHHHhhcCCChHHHHHHHHhcCC--chhHHHHHHHHHHHHHhh
Q 002082 21 GPADLAKLQSIMHSIEIACSSIQMHV-N---PAAAEATILGLCQSPQPYKACQFILENSQ--VANARFQAAAAIRDAAMR 94 (971)
Q Consensus 21 ~~md~~~l~~~~~~lE~~~~~ly~~~-~---r~~Ae~~L~~f~~~~~~~~~c~~iLe~S~--~~y~~f~a~~~L~~~i~~ 94 (971)
|+||+ +++++|.+..|.|. + |++|+++|.+||++|++|..|..||.+++ +++++|||+++|++.|.
T Consensus 1 ~~m~~-------~~v~~Al~~~~~p~sd~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I~- 72 (980)
T 3ibv_A 1 GPMSA-------QDVENAVEAALDPSVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKTKYKPSTRLICLQTLSEKVR- 72 (980)
T ss_dssp --CHH-------HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHH-
T ss_pred CCCCH-------HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHcChhHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-
Confidence 67874 55677776667763 3 89999999999999999999999998875 79999999999999998
Q ss_pred ccCCCCHH----HHHHHHHHHHHHHHHcC-CCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCCh-h
Q 002082 95 EWSFLTAD----EKKSLIGFCLCFVMQHA-SSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGV-D 168 (971)
Q Consensus 95 ~W~~l~~~----~k~~lr~~ll~yl~~~~-~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~-~ 168 (971)
.++++ ++..||+++++++.+.. .+.+++|++|++++++.|.|+.|++. |++++.++.+.+.+ +++ .
T Consensus 73 ---~l~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p~~----Wp~~i~~l~~~~~~-~~~~~ 144 (980)
T 3ibv_A 73 ---EWNNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSN----WNDFFASLQGVIAA-SSQSE 144 (980)
T ss_dssp ---HCCTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTTTT----CTTHHHHHHHHHHH-HCCHH
T ss_pred ---hCChhhhHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhCccc----CchHHHHHHHHhcC-CChhH
Confidence 58999 99999999999999843 24689999999999999999999984 99999999999974 233 4
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCCCCHHHHHHH---HHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 002082 169 TQFIGINFLESLVSEFSPSTSSAMGLPREFHEQC---RISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAA 245 (971)
Q Consensus 169 ~~~igl~iL~~lv~Efs~~~ss~~gl~~~~Hrk~---~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~ 245 (971)
.....+++|..+-+|+...+ +.++.+.+.|. |..+++.++..|+..++.+|.+.... ....+...+
T Consensus 145 ~~~~~LriL~~i~EEv~~~~---~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~--------~~~~l~~~~ 213 (980)
T 3ibv_A 145 FSNFYLKVLLSIGDEIADSL---VLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNA--------KNYGTVGLC 213 (980)
T ss_dssp HHHHHHHHHHHHHHHHCCCC---SCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------TCHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHhcc---cccCHHHHhhhHHHHHHHHhccHHHHHHHHHHHHHHHhcc--------CCHHHHHHH
Confidence 56678899998778876532 13344434443 88999888999999999999875421 234688999
Q ss_pred HHHHHHhcccccccCCCCCcccccccccccccccCCCCCCcccccCCCccchHhhcccchHHHHHHHHHHHHhccccCCC
Q 002082 246 LRLLHQILNWDFQFDTSGRKISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALISSGHIVWLLNLYSALRQKFSSEGY 325 (971)
Q Consensus 246 L~l~~~~LswdF~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~~~~l~llf~ly~~~r~~~~~~~~ 325 (971)
|+++..+++|...+ .+.++.+++++|++..
T Consensus 214 L~~l~s~i~wi~~~---------------------------------------~i~~~~ll~~l~~~L~----------- 243 (980)
T 3ibv_A 214 LQVYAQWVSWININ---------------------------------------LIVNEPCMNLLYSFLQ----------- 243 (980)
T ss_dssp HHHHHHHTTTSCHH---------------------------------------HHHCHHHHHHHHHHTT-----------
T ss_pred HHHHHHHHhhcCHH---------------------------------------hhhcchHHHHHHHHcC-----------
Confidence 99999999998765 5566778888886531
Q ss_pred CCCccchHHHHHHHHHHhhcccCccCCCChhhHHHHHHHHHHhhhhhcCChhhhHHHhhhCCCh-hhHHHHHHHHHHHHh
Q 002082 326 WLDCPIAVSARKLIVQLCSLTGTVFPSDNGKMQEHHLLQLLSGILEWVDPPDVVAQAIESGKSE-SEMLDGCRALLSIAT 404 (971)
Q Consensus 326 ~~~~~l~~~~l~cL~qLasl~~~~f~~~~~~~r~~yl~~~l~~~~~il~~~~~~~~~~~~gl~~-~~~~e~cr~L~rL~~ 404 (971)
++++...|.+||.++.+.+.+ ..++.+.+..+ ++..++.... ..-.+ +-...+||++..+..
T Consensus 244 --~~~~r~~A~ecL~ei~~k~~~------~~~k~~li~~l--~L~~~~~~l~-------~~~~D~d~~~~la~L~~~~ge 306 (980)
T 3ibv_A 244 --IEELRCAACETMTEIVNKKMK------PLEKLNLLNIL--NLNLFFSKSQ-------EQSTDPNFDEHVAKLINAQGV 306 (980)
T ss_dssp --SHHHHHHHHHHHHHHHHSCCC------HHHHHHHHHHH--HHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred --ChHHHHHHHHHHHHHHHcCCC------hhhHHHHHHHH--hHHHHHHHHh-------cccccHHHHHHHHHHHHHHHH
Confidence 267899999999999998653 22445445443 3444554321 11122 333467777766543
Q ss_pred hcChhhHHHHhhccCc-------hhHHHHHHHHHHHHHHHHhhhhcccCcchHHHHHHHHHHHHHhhhcccccCCCCCCC
Q 002082 405 VTTPFVFDRLLKSIRP-------FGTLTLLSNLMCEVVKVLMMNNTEEGTWSWEARDILLDTWTTLLVSLDSTGRNVVLP 477 (971)
Q Consensus 405 ~~~~~~~~~l~~~~~~-------~~~l~~L~~lt~~~i~~~~~~~~~~~~~~~es~~~LL~~W~~lv~~~~~~~~~~~~p 477 (971)
.+. .+ ..... ......+..+.-.+++... .++ .+.....+.+|..++....+.....+.+
T Consensus 307 ~l~-----~~-~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~---~~~----deVs~~t~~Fw~~~l~~~~~~~~~~~~~ 373 (980)
T 3ibv_A 307 ELV-----AI-KSDPSELSPELKENCSFQLYNLFPYLIRYLS---DDY----DETSTAVFPFLSDLLVSLRKESSSKELS 373 (980)
T ss_dssp HHH-----HH-HTSCC--CHHHHHHHHHHHHHTHHHHHHHHT---CSS----HHHHHTTHHHHHHHHHHHHHHTTSCCCC
T ss_pred HHH-----HH-ccCccccchhhhhhHHHHHHHHHHHHHHHhC---CCc----hhHHHHHHHHHHHHHHHHHhcccccccc
Confidence 321 11 11000 0011112222222222211 122 2556677889999988655432222345
Q ss_pred hhhhhhHHHHHHHHHHhccccccccccCCCCcccchhccHhHHHHHHH-HHHHHHHhcHhhhHHHHHHHHHHHHHHHhcc
Q 002082 478 LEVRNAAASLFALIVESELKVASASAMDDNGEFNYLQASISAMDERLS-SYALIARAAIDATVPLLTRLFSERFARLHQG 556 (971)
Q Consensus 478 ~~l~~~~~~I~~~Yi~srL~~~~~~~~~d~e~de~~~~d~~~~~eqL~-~ia~l~R~~~~~t~~lL~~l~~~~~~~l~~~ 556 (971)
........++... +-.|+..++....++++++| ++++-..|+.++. .+-.+++..++..++.+...+...+.+....
T Consensus 374 ~~~~~~l~~Ll~~-li~k~~yp~d~~~~~~~d~e-d~~~F~e~Rk~l~~l~d~~~~l~~~~~l~~~~~~i~~~l~~~l~~ 451 (980)
T 3ibv_A 374 ASLKEFLKSLLEA-IIKKMKYDESQEWDDDPDSE-EEAEFQEMRKKLKIFQDTINSIDSSLFSSYMYSAITSSLSTAATL 451 (980)
T ss_dssp HHHHHHHHHHHHH-HHHTTSCCTTCCCCCCSSSS-THHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHH-HHHHccCCCccccccccchh-HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhcc
Confidence 5555667788877 55578876653222111111 1111222333333 3446667778888885555555555433221
Q ss_pred cCCCCCchhHHHHHHHHHHHHhHhccCCCC-------CcccCchhhhhhhhhhhhcccchHHHHHHHHHHHHHhhcCccc
Q 002082 557 RGMIDPTETLEELYSLLLITGHVLADEGEG-------EIPVVPNAIQTHFVDTIEAAKHPVVLLCGSIIKFAEWSLDPEA 629 (971)
Q Consensus 557 ~~~~~~~~~~E~L~WLv~i~g~~lad~~~g-------e~~~ip~~i~~~~~~~~~~~~d~vv~Lv~~l~~l~~~~l~~~~ 629 (971)
+ ...-++++.=-++..|++ |+.... +.+..| .++.++..+ ... +.
T Consensus 452 --~--~~~~W~~~EaaL~~l~~i-aE~i~~~~~~~~~~~~~lp----------------~l~~ll~~l---l~s----~i 503 (980)
T 3ibv_A 452 --S--PENSWQLIEFALYETYIF-GEGLRGPDAFFNEVDKSPT----------------VLSQILALV---TTS----QV 503 (980)
T ss_dssp --C--HHHHHHHHHHHHHHHHHT-TTTCCSGGGTBCSSSCCBC----------------HHHHHHHHH---HHS----ST
T ss_pred --c--CCCCHHHHHHHHHHHHHH-HhhccccccccCcccchhH----------------HHHHHHHHH---HhC----CC
Confidence 0 112344555555666653 443211 111222 122322222 221 12
Q ss_pred cccCCCHHHHHHHHHHHHHHHHhccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCCCchhHHHHHHHHHHHhc
Q 002082 630 RASVFSPRLMEAIVWFLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDIIVRISMTTL 709 (971)
Q Consensus 630 ~~~~~Sp~L~~a~lwfl~~~~~~Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~~~~~vl~~iv~ki~~nL 709 (971)
+..-.|.+..+..|.+.|+ ..|+...++ . ..+.+....+.. .+
T Consensus 504 -~~~~hp~V~~~~~~~l~ry-s~~~~~~~~---------------~----l~~~L~~ll~~~------------gl---- 546 (980)
T 3ibv_A 504 -CRHPHPLVQLLYMEILVRY-ASFFDYESA---------------A----IPALIEYFVGPR------------GI---- 546 (980)
T ss_dssp -TTCCCHHHHHHHHHHHHHT-GGGGGTCCT---------------T----HHHHHHHHTSTT------------TT----
T ss_pred -CCCCCHHHHHHHHHHHHHH-HHHHhcCch---------------h----HHHHHHHHhccc------------cc----
Confidence 2235699999999999998 345531100 0 012222222111 11
Q ss_pred cCCCCchhHHHHHHHHHHHHHhccccchhhHHcchHHHHHHHHhhcccccccc---Cc-------------------hhh
Q 002082 710 VSYPGEKDLQELTCNQLLHALVRRKNVCVHLVALGSWRELASAFANDKTLILL---NS-------------------TNQ 767 (971)
Q Consensus 710 ~~w~~e~~v~~~t~~~LL~~L~~~~~~~~~l~~l~~~~~L~~~~~~~~~~~~l---~~-------------------~~~ 767 (971)
-..+++|...++ .+|..+++.... .+ .|....++..+. +++.. |. +.+
T Consensus 547 --~~~~~~V~~~a~-~af~~f~~~~~~--~L--~~~~~~il~~l~---~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 616 (980)
T 3ibv_A 547 --HNTNERVRPRAW-YLFYRFVKSIKK--QV--VNYTESSLAMLG---DLLNISVSPVTDMDAPVPTLNSSIRNSDFNSQ 616 (980)
T ss_dssp --TCCCTTTHHHHH-HHHHHHHHHTTT--TC--SSSHHHHHHHTT---GGGCCCCCCCCC--CSSCCHHHHHHTTTHHHH
T ss_pred --cCCChhHHHHHH-HHHHHHHHHhhH--Hh--hhHHHHHHHHHH---HhhcCcCCCCCcccccccchhhhcccCCchHH
Confidence 123567777777 888888876322 11 255566665543 12211 11 135
Q ss_pred HHHHHHHHHHHhcCCC-chhhHHHHHHHHHHHHHHHHHHhCCCCcccccChhhHHHHHHHHHHHhhchhhccCc---CcH
Q 002082 768 RSLAQTLVLSAYGMRN-SESSNQYVRDLTRHATAYLVELSGKNDLKNVSQQPDIILLVSCLLERLRGAANATEP---RTQ 843 (971)
Q Consensus 768 r~l~~aL~~l~~~~~~-~~~~~~~f~~~l~pl~~~~~~l~~~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~---~s~ 843 (971)
..+|++++.++.+... .+....++..++.|+-.++....+...- .+++.. ++...+..+.-++.+... +..
T Consensus 617 l~L~eaig~li~~~~~~~e~~~~~l~~ll~pl~~~l~~~l~~~~~----~~~~~~-~i~~~i~al~~lakgf~~~~~~~~ 691 (980)
T 3ibv_A 617 LYLFETVGVLISSGNLTPEEQALYCDSLINALIGKANAALSSDLS----ALENII-SVYCSLMAIGNFAKGFPARGSEEV 691 (980)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTSCC------CHHH-HHHHHHHHHHHHHHTSCSCC-CCC
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc----CccHHH-HHHHHHHHHHHHhccCCcccCCCC
Confidence 5599999999976553 4567889999999999999999864321 101111 333444444444444322 211
Q ss_pred HHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHHHhcc
Q 002082 844 KAIYEMGFSVMNPVLLLLEVYKHESAVVYLLLKFVVDWVDGQ 885 (971)
Q Consensus 844 ~~lf~~l~~~l~~l~~l~~~y~~~p~Vv~~iLkf~~elv~n~ 885 (971)
. +-+.+.+.++++..+++.|.++..|...+-++|.-++...
T Consensus 692 p-~~~~f~~~~~~il~~l~~~~~~~~irea~~~~~~r~i~~l 732 (980)
T 3ibv_A 692 A-WLASFNKASDEIFLILDRMGFNEDIRGAVRFTSGRIINVV 732 (980)
T ss_dssp S-HHHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHTTTT
T ss_pred c-HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHc
Confidence 2 5577888899999999999999999999988888887653
No 5
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=99.96 E-value=1.2e-25 Score=291.59 Aligned_cols=692 Identities=11% Similarity=0.103 Sum_probs=409.0
Q ss_pred CChHhHHHHHHHHHHHHHHhhCCC-C---HHHHHHHHHHhhcCCChHHHHHHHHh-cCCchhHHHHHHHHHHHHHhhccC
Q 002082 23 ADLAKLQSIMHSIEIACSSIQMHV-N---PAAAEATILGLCQSPQPYKACQFILE-NSQVANARFQAAAAIRDAAMREWS 97 (971)
Q Consensus 23 md~~~l~~~~~~lE~~~~~ly~~~-~---r~~Ae~~L~~f~~~~~~~~~c~~iLe-~S~~~y~~f~a~~~L~~~i~~~W~ 97 (971)
|+++++++..++++++++.+|.|. + |++||++|.+|+++|+.|..|..+|. .+.+++++|+|+.+|++.|.++|.
T Consensus 1 ~~~~~~~~~~~~l~~~l~~~~~p~~~~~~r~~Ae~~L~~~~~~p~~~~~~~~~L~~~s~~~~vR~~A~~~Lk~~I~~~W~ 80 (1204)
T 3a6p_A 1 MAMDQVNALCEQLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWN 80 (1204)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHSGG
T ss_pred CChhhHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHhCchHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhcc
Confidence 455566677799999999999983 3 89999999999999999999999887 788999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCC---CChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHH
Q 002082 98 FLTADEKKSLIGFCLCFVMQHAS---SPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGI 174 (971)
Q Consensus 98 ~l~~~~k~~lr~~ll~yl~~~~~---~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl 174 (971)
.+++++|..||+++++++.+... +.+++|+++++++++.|+|++|++ .|+++++++.++++ .++.++..++
T Consensus 81 ~l~~e~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~----~Wp~ll~~L~~~~~--~~~~~~e~~L 154 (1204)
T 3a6p_A 81 GMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQ----HWPDMLIELDTLSK--QGETQTELVM 154 (1204)
T ss_dssp GSCHHHHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTT----TCTTHHHHHHHHHH--TCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCcc----cchHHHHHHHHHhc--CCHHHHHHHH
Confidence 99999999999999999987632 157999999999999999999996 49999999999997 3778899999
Q ss_pred HHHHHHHhhhCCCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHh-------hhhhhhhhHHHHHHHHHH
Q 002082 175 NFLESLVSEFSPSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQI-------IESDAAASEVKACTAALR 247 (971)
Q Consensus 175 ~iL~~lv~Efs~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~-------~~~~~~~~~~~l~~~~L~ 247 (971)
.+|..+.+|+.... .+...++++++..+++. ++.||.++.++|++..... .+.+.......++.++|+
T Consensus 155 ~iL~~L~Eev~~~~----~~~~~r~~~l~~~l~~~-~~~I~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aL~ 229 (1204)
T 3a6p_A 155 FILLRLAEDVVTFQ----TLPPQRRRDIQQTLTQN-MERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALN 229 (1204)
T ss_dssp HHHHHHHHHHHTSC----CSCHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccc----chHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcccccccchhhhhhhHHHHHHHHH
Confidence 99999999965432 12335666778899766 9999999999987643211 000111234568999999
Q ss_pred HHHHhcccccccCCCCCcccccccccccccccCCCCCCcccccCCCccchHhhcc--cchHHHHHHHHHHHHhccccCCC
Q 002082 248 LLHQILNWDFQFDTSGRKISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALIS--SGHIVWLLNLYSALRQKFSSEGY 325 (971)
Q Consensus 248 l~~~~LswdF~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~--~~~l~llf~ly~~~r~~~~~~~~ 325 (971)
++.++++|...+ .+.+ +.+++++|.++ .
T Consensus 230 ~l~~~l~Wi~~~---------------------------------------~i~~~~~~ll~~l~~~l----~------- 259 (1204)
T 3a6p_A 230 TLAGYIDWVSMS---------------------------------------HITAENCKLLEILCLLL----N------- 259 (1204)
T ss_dssp HHHTTTTTSCHH---------------------------------------HHHTTTSHHHHHHHHGG----G-------
T ss_pred HHHHHHhccCHH---------------------------------------HHHhccchHHHHHHHHc----C-------
Confidence 999999998764 2222 23788887542 1
Q ss_pred CCCccchHHHHHHHHHHhhcccCccCCCChhhHHHHHHHH----HHhhhhhcCChhhhHHHhhhCCChhhHHHHHHHHHH
Q 002082 326 WLDCPIAVSARKLIVQLCSLTGTVFPSDNGKMQEHHLLQL----LSGILEWVDPPDVVAQAIESGKSESEMLDGCRALLS 401 (971)
Q Consensus 326 ~~~~~l~~~~l~cL~qLasl~~~~f~~~~~~~r~~yl~~~----l~~~~~il~~~~~~~~~~~~gl~~~~~~e~cr~L~r 401 (971)
++++...|++||+++++.+.+ + + ++..++..+ +.++........ ..++ +++-+++|+.+.+
T Consensus 260 --~~~lr~~A~ecL~~i~s~~~~--~--~--~~~~li~~l~~~~l~~l~~~~~~~~------~~~~-~e~d~e~~k~l~~ 324 (1204)
T 3a6p_A 260 --EQELQLGAAECLLIAVSRKGK--L--E--DRKPLMVLFGDVAMHYILSAAQTAD------GGGL-VEKHYVFLKRLCQ 324 (1204)
T ss_dssp --CTTTHHHHHHHHHHHHTCCSC--H--H--HHGGGGGGGSHHHHHHHHHHHHTCC------CCSC-CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhCCCC--h--h--hHHHHHHHHhhHHHHHHHHHhhcCC------CCCC-ccHHHHHHHHHHH
Confidence 377999999999999998764 1 1 233232211 122222210000 0122 2445677777777
Q ss_pred HHhhcChhhHHHHhhcc---CchhHHHHHHHHHHHHHHHHhhhhcccCcchHHHHHHHHHHHHHhhhcccccCCCCCCCh
Q 002082 402 IATVTTPFVFDRLLKSI---RPFGTLTLLSNLMCEVVKVLMMNNTEEGTWSWEARDILLDTWTTLLVSLDSTGRNVVLPL 478 (971)
Q Consensus 402 L~~~~~~~~~~~l~~~~---~~~~~l~~L~~lt~~~i~~~~~~~~~~~~~~~es~~~LL~~W~~lv~~~~~~~~~~~~p~ 478 (971)
+...+.- .+..+.... .....+..+-.+.. .++.. . ..+.....+++|..++..... ...+
T Consensus 325 ll~~lg~-~l~~l~~~~~~~~~~~~l~~~l~~lL----~~t~~--~----~~~vs~~~l~fW~~ll~~~~~-----~~~~ 388 (1204)
T 3a6p_A 325 VLCALGN-QLCALLGADSDVETPSNFGKYLESFL----AFTTH--P----SQFLRSSTQMTWGALFRHEIL-----SRDP 388 (1204)
T ss_dssp HHHHHHH-HHHHHHHTCSSCCCCTTHHHHHHHHH----HHHTS--S----CHHHHHHHHHHHHHHHSCTTT-----TTCH
T ss_pred HHHHHHH-HHHHHHhccccccChhHHHHHHHHHH----HHHhC--c----cHHhHHHHHHHHHHHHhcccc-----cccH
Confidence 7655532 233322110 01111222111222 22221 1 235556668999999885321 1123
Q ss_pred hhhhhHHHHHHHHH--Hhcccccccccc-------CCCCcccchhcc-HhHHHHHHHHHHHHHHhcHhhhHHHHHHHHHH
Q 002082 479 EVRNAAASLFALIV--ESELKVASASAM-------DDNGEFNYLQAS-ISAMDERLSSYALIARAAIDATVPLLTRLFSE 548 (971)
Q Consensus 479 ~l~~~~~~I~~~Yi--~srL~~~~~~~~-------~d~e~de~~~~d-~~~~~eqL~~ia~l~R~~~~~t~~lL~~l~~~ 548 (971)
.+..+.+++...-. -.|+..|+.... +|.|++|+.+++ ++.+++..+.+-.+++..|..+++.+.+.+.+
T Consensus 389 ~~~~~l~~Ll~vl~~~l~k~~yp~~~~~~~~~~~~~D~d~~~E~~~~f~~~Rk~~~d~l~~i~~v~p~~~l~~v~~~l~~ 468 (1204)
T 3a6p_A 389 LLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKY 468 (1204)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCSSCCSSTHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccCCcchhhhhcccCCcHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 34455666666631 135555542210 111111111111 23346678888899999999999888887766
Q ss_pred HHHHHhccc-C--------------CCCCchhHHHHHHHHHHHHhHhccCCCC-CcccCchhhhhhhhhhhhcccchHHH
Q 002082 549 RFARLHQGR-G--------------MIDPTETLEELYSLLLITGHVLADEGEG-EIPVVPNAIQTHFVDTIEAAKHPVVL 612 (971)
Q Consensus 549 ~~~~l~~~~-~--------------~~~~~~~~E~L~WLv~i~g~~lad~~~g-e~~~ip~~i~~~~~~~~~~~~d~vv~ 612 (971)
++....... + ......+.+ .--.+..+++++.+-.++ |.+-.|. .
T Consensus 469 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~ea~~~~leav~~~~~~~~e~~~l~~------------------~ 529 (1204)
T 3a6p_A 469 QLSTFLDAGSVNSCSAVGTGEGSLCSVFSPSFVQ-WEAMTLFLESVITQMFRTLNREEIPV------------------N 529 (1204)
T ss_dssp HHTCC-----------------CCSCSSSHHHHH-HHHHHHHHHHHHHHHHHHSCTTCCCH------------------H
T ss_pred HHhhhhcccccccccccccccccccCcCCHHHHH-HHHHHHHHHHHHHHHhcccccccccH------------------H
Confidence 554311110 0 000011111 111233444443321000 0111121 1
Q ss_pred HHHHHHHHHHhhcCccccccCCCHHHHHHHHHHHHHHHHhccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCC
Q 002082 613 LCGSIIKFAEWSLDPEARASVFSPRLMEAIVWFLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHN 692 (971)
Q Consensus 613 Lv~~l~~l~~~~l~~~~~~~~~Sp~L~~a~lwfl~~~~~~Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~ 692 (971)
++..++..+.. ++ . -.|.+..+.+..++++. .|+. . .
T Consensus 530 ~~~~Ll~~ll~-~~--~----~~p~l~~~~i~~l~~l~-~~~~---~-------------------------------~- 566 (1204)
T 3a6p_A 530 DGIELLQMVLN-FD--T----KDPLILSCVLTNVSALF-PFVT---Y-------------------------------R- 566 (1204)
T ss_dssp HHHHHHHHHHH-CC--C----SCHHHHHHHHHHHHHHG-GGGG---T-------------------------------C-
T ss_pred HHHHHHHHHHh-CC--C----CChHHHHHHHHHHHHHH-HHHh---c-------------------------------C-
Confidence 22344443211 11 1 35778777877776652 2332 0 0
Q ss_pred CchhHHHHHHHHHHHhccCCC----------CchhHHHHHHHHHHHHHhccccchhhHHcchHHHHHHHHhhccccccc-
Q 002082 693 QGKPVLDIIVRISMTTLVSYP----------GEKDLQELTCNQLLHALVRRKNVCVHLVALGSWRELASAFANDKTLIL- 761 (971)
Q Consensus 693 ~~~~vl~~iv~ki~~nL~~w~----------~e~~v~~~t~~~LL~~L~~~~~~~~~l~~l~~~~~L~~~~~~~~~~~~- 761 (971)
...+.-++++++..+..++ ...+|...++ ..|..|+...+ ..+ .|.+..|...+..-..-.+
T Consensus 567 --p~~L~~vL~~ll~~l~~~~~~~~~~~~~~~~k~vr~~a~-~al~~L~~~~~--~~L--~p~~~~i~~~~~~~l~~~~~ 639 (1204)
T 3a6p_A 567 --PEFLPQVFSKLFSSVTFETVEESKAPRTRAVRNVRRHAC-SSIIKMCRDYP--QLV--LPNFDMLYNHVKQLLSNELL 639 (1204)
T ss_dssp --GGGHHHHHHHHHHHHHCCTTCSTTSCCCHHHHHHHHHHH-HHHHHHHHHCH--HHH--GGGHHHHHHHHHHHHHSTTT
T ss_pred --chHHHHHHHHHHHhhccCCcccccccccHHHHHHHHHHH-HHHHHHHHHhh--HHH--HHHHHHHHHHHHHHHhCccc
Confidence 0122223344444443321 2336767777 88888887542 122 2555555554321100012
Q ss_pred cCchhhHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHH-----HhCCC-Ccc------c-----ccChhhH--HH
Q 002082 762 LNSTNQRSLAQTLVLSAYGMRNSESSNQYVRDLTRHATAYLVE-----LSGKN-DLK------N-----VSQQPDI--IL 822 (971)
Q Consensus 762 l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f~~~l~pl~~~~~~-----l~~~~-~~~------~-----~~~~~~v--~~ 822 (971)
++...+..+|.+++.+....++.+...+|++.++.|+.+++.+ ..+.+ .|. + ...+++- +.
T Consensus 640 l~~~e~~~L~eal~~ia~~~~~~~~~~~~l~~ll~P~~~~w~~~~~~~~~s~~~~f~~~~G~~~~~~~~~~~d~~~~~r~ 719 (1204)
T 3a6p_A 640 LTQMEKCALMEALVLISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVLSDVDAFIAYVGTDQKSCDPGLEDPCGLNRA 719 (1204)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHTSSCC--CTTCCTHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHccHHHHHhhcCHHHHHHHhCCCCCcccccccchhhhhHH
Confidence 5667788899999888533345555666799999999988763 22111 110 0 0011111 12
Q ss_pred -------HHHHHHHHh----------hc-hhhccCcC---cH-HHHHHHHHhhhHHHHHHHHhhc--CChHHHHHHH
Q 002082 823 -------LVSCLLERL----------RG-AANATEPR---TQ-KAIYEMGFSVMNPVLLLLEVYK--HESAVVYLLL 875 (971)
Q Consensus 823 -------~v~~ll~~L----------rG-i~~a~~~~---s~-~~lf~~l~~~l~~l~~l~~~y~--~~p~Vv~~iL 875 (971)
.+.+.++.. +| .+....++ .| ....+.+.+.+|.+.++++..+ .+|++...+-
T Consensus 720 ~l~~~~~~l~~~l~r~~~~~~~~~~~~~gf~~~~~~~~~p~~~~p~~~~i~~ilP~ll~Ll~~~~~l~~p~~~~~l~ 796 (1204)
T 3a6p_A 720 RMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTSSGNPIFRNPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMA 796 (1204)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSHHHHHHTTCEEEECSSCCEEECCTTHHHHHHHHHHHHHHHHHHHHTTSHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHhcCCCChhhhhcCCceeccCCCCCccccCchHHHHHHHhHHHHHHHHHHHHhcCcHhhhhcC
Confidence 456667765 33 44443221 22 1335566666777777777766 6788876553
No 6
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=99.96 E-value=5.8e-25 Score=283.26 Aligned_cols=638 Identities=12% Similarity=0.160 Sum_probs=388.7
Q ss_pred HHHHHHHHHhhCCCC--HHHHHHHHHHhhcCCChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Q 002082 33 HSIEIACSSIQMHVN--PAAAEATILGLCQSPQPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTADEKKSLIGF 110 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~lr~~ 110 (971)
++++++++.+|.|.+ |++||++|.+|+++|++|..|..||+++++++++|+|+.+|++.|.++|..+++++|..||++
T Consensus 16 ~~l~~~l~~~~~p~~~~r~~Ae~~L~~~~~~p~~~~~l~~iL~~s~~~~vr~~aa~~Lk~~i~~~W~~l~~~~~~~ir~~ 95 (1049)
T 3m1i_C 16 ALLDQVVSTFYQGSGVQQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNF 95 (1049)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSTTGGGGHHHHHHHCSCHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHhCchHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhhCccCCHHHHHHHHHH
Confidence 778999999999864 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCC-----hhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHHHHHHHHHhhhC
Q 002082 111 CLCFVMQHASSP-----EGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFS 185 (971)
Q Consensus 111 ll~yl~~~~~~l-----~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl~iL~~lv~Efs 185 (971)
+++++.+.+++. +++|+++++++++.|+|++|++ .|+++++++.+.++ .++.++..++.+|..+.+|+.
T Consensus 96 ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~----~Wp~ll~~L~~~~~--~~~~~~~~~l~~L~~l~eev~ 169 (1049)
T 3m1i_C 96 VVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQ----NWPEFIPELIGSSS--SSVNVCENNMIVLKLLSEEVF 169 (1049)
T ss_dssp HHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTT----TCTTHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCccccchhhHHHHHHHHHHHHHHHHHhCcc----cchHHHHHHHHHHc--cChHHHHHHHHHHHHHHHHHH
Confidence 999999876333 3799999999999999999996 48899999999996 466777778888888777775
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhcccccccCCCCCc
Q 002082 186 PSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLHQILNWDFQFDTSGRK 265 (971)
Q Consensus 186 ~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~~~LswdF~~~~~d~~ 265 (971)
..+...++..... ..+..|++ .+..||.++.++++.. ....+...+|+++.++++|...+
T Consensus 170 ~~~~~~~~~~r~~--~lk~~l~~-~~~~i~~~~~~~l~~~-----------~~~~~~~~aL~~l~~~l~wi~~~------ 229 (1049)
T 3m1i_C 170 DFSAEQMTQAKAL--HLKNSMSK-EFEQIFKLCFQVLEQG-----------SSSSLIVATLESLLRYLHWIPYR------ 229 (1049)
T ss_dssp TSCTTTSCHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHTTTSCTH------
T ss_pred HhcchhhhhHHHH--HHHHHHHH-HHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHHhhCCHH------
Confidence 4322222333333 34678876 5999999988887531 12467889999999999998754
Q ss_pred ccccccccccccccCCCCCCcccccCCCccchHhhcccchHHHHHHHHHHHHhccccCCCCCCccchHHHHHHHHHHhhc
Q 002082 266 ISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALISSGHIVWLLNLYSALRQKFSSEGYWLDCPIAVSARKLIVQLCSL 345 (971)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~~~~l~llf~ly~~~r~~~~~~~~~~~~~l~~~~l~cL~qLasl 345 (971)
.+.++.+++++|+.|.. ++++...+++||+++.+.
T Consensus 230 ---------------------------------~~~~~~ll~~l~~~~l~------------~~~~~~~a~~~L~~i~~~ 264 (1049)
T 3m1i_C 230 ---------------------------------YIYETNILELLSTKFMT------------SPDTRAITLKCLTEVSNL 264 (1049)
T ss_dssp ---------------------------------HHHSSSHHHHHHTHHHH------------SHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------HHhhhhHHHHHHHHhCC------------CHhHHHHHHHHHHHHHhC
Confidence 33556688888866542 267899999999999988
Q ss_pred ccCccCCCChhhHHHHHHHHHHhhhh-----hcCChhhhHHHhhhCCC-hhh-HHHHHHHHHHHHhhcChhhHHHHhhcc
Q 002082 346 TGTVFPSDNGKMQEHHLLQLLSGILE-----WVDPPDVVAQAIESGKS-ESE-MLDGCRALLSIATVTTPFVFDRLLKSI 418 (971)
Q Consensus 346 ~~~~f~~~~~~~r~~yl~~~l~~~~~-----il~~~~~~~~~~~~gl~-~~~-~~e~cr~L~rL~~~~~~~~~~~l~~~~ 418 (971)
+- ++... .....+..++.++.. ++++.......+..+-+ +.+ +..+|+.+..+...+. .+.+.
T Consensus 265 ~~---~~~~~-~~~~~~~~l~~~~l~~l~~si~p~~~~l~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~-----~~~~~- 334 (1049)
T 3m1i_C 265 KI---PQDND-LIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNR-----ALLES- 334 (1049)
T ss_dssp CC---CTTCH-HHHHHHHHHHHHHHHHHHHHTCCTTSCHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHH-----HHHHS-
T ss_pred CC---Ccchh-hHHHHHHHHHHHHHHHHHHhhCCCcccHHHHhccCCcchHHHHHHHHHHHHHHHHHHH-----HHHcC-
Confidence 42 22110 011233333333333 44432222222222222 233 3478888877655441 11111
Q ss_pred CchhHHHHHHHHHHHHHHHHhhhhcccCcchHHHHHHHHHHHHHhhhcccccCCCCCCChhhhhhHHHHHHHHHHhcccc
Q 002082 419 RPFGTLTLLSNLMCEVVKVLMMNNTEEGTWSWEARDILLDTWTTLLVSLDSTGRNVVLPLEVRNAAASLFALIVESELKV 498 (971)
Q Consensus 419 ~~~~~l~~L~~lt~~~i~~~~~~~~~~~~~~~es~~~LL~~W~~lv~~~~~~~~~~~~p~~l~~~~~~I~~~Yi~srL~~ 498 (971)
...+...+..+...++.. +. .. ..+....++++|..+++.+-. . .........+..++... +-.++..
T Consensus 335 -~~~~~~~l~~~l~~ll~~-~~--~~----d~~v~~~~lefw~~l~~~l~~-~--~~~~~~~~~~l~~Lv~~-ll~~m~~ 402 (1049)
T 3m1i_C 335 -DESLRELLLNAHQYLIQL-SK--IE----ERELFKTTLDYWHNLVADLFY-E--PLKKHIYEEICSQLRLV-IIENMVR 402 (1049)
T ss_dssp -CGGGHHHHHHHHHHHHHH-HT--SS----CHHHHHHHHHHHHHHHHHHHH-S--TTCGGGGHHHHHHHHHH-HHHTCCC
T ss_pred -ChhhHHHHHHHHHHHHHH-Hc--CC----cHHHHHHHHHHHHHHHHHHHh-c--hhHHHHHHHHHHHHHHH-HHHhcCC
Confidence 000111122222222221 11 11 246678889999999884310 0 00112233455677766 4445655
Q ss_pred ccccccCCCCccc------chhccHhHHHHHHHHHHHHHHhcHhhhHHHHHHHHHHHHHHHhcccCCCCCchhHHHHHHH
Q 002082 499 ASASAMDDNGEFN------YLQASISAMDERLSSYALIARAAIDATVPLLTRLFSERFARLHQGRGMIDPTETLEELYSL 572 (971)
Q Consensus 499 ~~~~~~~d~e~de------~~~~d~~~~~eqL~~ia~l~R~~~~~t~~lL~~l~~~~~~~l~~~~~~~~~~~~~E~L~WL 572 (971)
++...-.++|+.| +++|++..++.--+++-.+++..+..+++.+.+.+.+.++ +. . .-+.+..=.
T Consensus 403 ~ed~~~~~dd~~e~~r~~~~d~d~~~~~~~~~~~L~~l~~~~~~~~l~~v~~~l~~~l~------~~-~--~~W~~~eaa 473 (1049)
T 3m1i_C 403 PEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQID------GS-E--WSWHNINTL 473 (1049)
T ss_dssp CTTCCEEECTTSCEEECSSCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHT------SS-S--CCHHHHHHH
T ss_pred CcceeeeeCCCCcchHhhhccchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhC------CC-C--CCHHHHHHH
Confidence 4322100111111 0111222333333444455677788888877777665432 11 1 123344456
Q ss_pred HHHHHhHhccCCCCCcccCchhhhhhhhhhhhcccchHHHHHHHHHHHHHhhcCccccccCCCHHHHHHHHHHHHHHHHh
Q 002082 573 LLITGHVLADEGEGEIPVVPNAIQTHFVDTIEAAKHPVVLLCGSIIKFAEWSLDPEARASVFSPRLMEAIVWFLARWSQT 652 (971)
Q Consensus 573 v~i~g~~lad~~~ge~~~ip~~i~~~~~~~~~~~~d~vv~Lv~~l~~l~~~~l~~~~~~~~~Sp~L~~a~lwfl~~~~~~ 652 (971)
++..|++ ++...+ +. .......++..+.+++... . +..-.|.+..+++|.++|+. .
T Consensus 474 l~algsi-a~~~~~-----~~------------e~~~l~~v~~~l~~l~~~~----~-~~~~~~~v~~~~~~~lgry~-~ 529 (1049)
T 3m1i_C 474 SWAIGSI-SGTMSE-----DT------------EKRFVVTVIKDLLDLTVKK----R-GKDNKAVVASDIMYVVGQYP-R 529 (1049)
T ss_dssp HHHHHHT-TTSSCH-----HH------------HHHHHHHHHHHHHHHTTSS----C-SHHHHHHHHHHHHHHHHHCH-H
T ss_pred HHHHHHH-hcccCc-----hh------------hHHHHHHHHHHHHHHHhhh----c-cccchHHHHHHHHHHHHHHH-H
Confidence 6666755 332211 00 0001223333334332211 0 00123566667889988884 3
Q ss_pred ccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCCCchhHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHhc
Q 002082 653 YLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDIIVRISMTTLVSYPGEKDLQELTCNQLLHALVR 732 (971)
Q Consensus 653 Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~~~~~vl~~iv~ki~~nL~~w~~e~~v~~~t~~~LL~~L~~ 732 (971)
|+... ...+.-+++++...+.. ..++|...++ ..|..++.
T Consensus 530 ~~~~~-------------------------------------~~~l~~vl~~ll~~l~~--~~~~V~~~A~-~al~~l~~ 569 (1049)
T 3m1i_C 530 FLKAH-------------------------------------WNFLRTVILKLFEFMHE--THEGVQDMAC-DTFIKIVQ 569 (1049)
T ss_dssp HHHHC-------------------------------------HHHHHHHHHHHHHHTTS--SCHHHHHHHH-HHHHHHHH
T ss_pred HHHhH-------------------------------------HHHHHHHHHHHHHHhcC--CCHHHHHHHH-HHHHHHHH
Confidence 44210 01222334444444432 3578888888 89999988
Q ss_pred cccchhhHHc------chHHHHHHHHhhccccccccCchhhHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHh
Q 002082 733 RKNVCVHLVA------LGSWRELASAFANDKTLILLNSTNQRSLAQTLVLSAYGMRNSESSNQYVRDLTRHATAYLVELS 806 (971)
Q Consensus 733 ~~~~~~~l~~------l~~~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f~~~l~pl~~~~~~l~ 806 (971)
... ..++. .|.+..++..... -+.+++.+....+|++++.++.+.++.+....++..+|.|+.+++.++.
T Consensus 570 ~~~--~~l~~~~~~~~~p~~~~il~~l~~--~~~~~~~~~~~~~~eai~~ii~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 645 (1049)
T 3m1i_C 570 KCK--YHFVIQQPRESEPFIQTIIRDIQK--TTADLQPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIV 645 (1049)
T ss_dssp HHT--HHHHSCCTTCSSCHHHHHHHTHHH--HHTTSCHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHH--HHhhcccCCCCCcHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532 12221 2667777765431 2334566667789999999988666556678899999999999998876
Q ss_pred CCCCc-ccccChhhHHHHHHHHHHHhhchhhccCc
Q 002082 807 GKNDL-KNVSQQPDIILLVSCLLERLRGAANATEP 840 (971)
Q Consensus 807 ~~~~~-~~~~~~~~v~~~v~~ll~~LrGi~~a~~~ 840 (971)
+...- .....+++....+..+++++..++.+...
T Consensus 646 ~~~~~~~~~~~d~~~~~~l~~~l~~~~~~~~~l~~ 680 (1049)
T 3m1i_C 646 EQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGA 680 (1049)
T ss_dssp HHHHHCGGGGGSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHhhchhhhcCHHHHHHHHHHHHHHHHHHHHhhH
Confidence 32100 01111334444567778877777766543
No 7
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=99.95 E-value=8.3e-25 Score=279.91 Aligned_cols=689 Identities=11% Similarity=0.066 Sum_probs=403.9
Q ss_pred CChHhHHHHHHHHHHHHHHhhCCCC--HHHHHHHHHHhhcCCChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCC
Q 002082 23 ADLAKLQSIMHSIEIACSSIQMHVN--PAAAEATILGLCQSPQPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLT 100 (971)
Q Consensus 23 md~~~l~~~~~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~ 100 (971)
||..++ ++++++++.+|.|.+ |++||++|.+|+++|++|..|..||+.+++++++|+|+.+|++.|.++|..++
T Consensus 1 m~~~d~----~~l~~~l~~~~~~d~~~r~~A~~~L~~~~~~p~~w~~~~~lL~~~~~~~vr~~aa~~L~~~i~~~w~~l~ 76 (971)
T 2x1g_F 1 MEPIDI----ARLEEAVVSFYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQFFGAITLHSKLMKHWHEVP 76 (971)
T ss_dssp --------------CTHHHHHTSTTTC----CHHHHHTTTSTHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHCGGGCC
T ss_pred CChhhH----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHccHhhCC
Confidence 444456 789999999998753 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCC-----ChhHHHHHHH
Q 002082 101 ADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIH-----GVDTQFIGIN 175 (971)
Q Consensus 101 ~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~-----~~~~~~igl~ 175 (971)
+++|..||++|++++.+.. +.+++|+++++.+++.|+|++|+ .|++++.++.+.+++.. ++.++..++.
T Consensus 77 ~~~~~~ir~~ll~~l~~~~-~~~~~vr~kl~~~la~i~~~~~p-----~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~~l~ 150 (971)
T 2x1g_F 77 PENREELKQKILESIVRFA-GGPKIVLNRLCISLGAYIVHMLG-----EWPGAIEEVINTFQNQRMPNVSADVQLWIMLE 150 (971)
T ss_dssp GGGHHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHTTC-----C------HHHHHHHHTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHccc-----cccHHHHHHHHHHhccccccCCCHHHHHHHHH
Confidence 9999999999999999876 45799999999999999999998 38899999999987411 4678999999
Q ss_pred HHHHHHhhhCCCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhcc-
Q 002082 176 FLESLVSEFSPSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLHQILN- 254 (971)
Q Consensus 176 iL~~lv~Efs~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~~~Ls- 254 (971)
+|..+.+|....+. .. +....+..++ ..++.++.++.+++.... ..........+...+|+++..++.
T Consensus 151 iL~~l~EEi~~~~~----~~--~r~~~~~~l~-~~~~~vl~ll~~~l~~~~----~~~~~~~~~~~~~~al~~l~~~~~~ 219 (971)
T 2x1g_F 151 VLTAIPEEAQVIHT----SV--KRVVLRAEIA-KRVQLVIHTVERYLKLQM----NRVWDAEAYSNMNRAVKCVGTWIKN 219 (971)
T ss_dssp HHHHHHHHHHHCCC----SS--CHHHHHHHHH-TTHHHHHHHHHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHhccCc----HH--HHHHHHHHHH-HHHHHHHHHHHHHHhccc----CCCCCccchhHHHHHHHHHHHHHhh
Confidence 99999999653321 11 1223345553 347777777666664321 000001123677888888877766
Q ss_pred -cccccCCCCCcccccccccccccccCCCCCCcccccCCCccchHhhcccchHHHHHHH----HHHHHhccccCC-CCCC
Q 002082 255 -WDFQFDTSGRKISINVFSAGVRTETSSSKRSECIIVQPGPAWCDALISSGHIVWLLNL----YSALRQKFSSEG-YWLD 328 (971)
Q Consensus 255 -wdF~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~Wr~~l~~~~~l~llf~l----y~~~r~~~~~~~-~~~~ 328 (971)
|.+.+ .++.+++++|++ |...+.. .+|. ...+
T Consensus 220 ~~ip~~-----------------------------------------~~~~ll~~l~~L~~~~~~~~~~~-~~~~~~~~~ 257 (971)
T 2x1g_F 220 IGYTIE-----------------------------------------GCVTITAVLLEVVHKCYWPCIHA-GDGCMTADE 257 (971)
T ss_dssp SCCCGG-----------------------------------------GHHHHHHHHHHHHHHHHSSSCC----CCCCHHH
T ss_pred CCcCcc-----------------------------------------ccccHHHHHHhhhhhhccccccc-cccccCcCC
Confidence 65433 123467777752 1000000 0000 0012
Q ss_pred ccchHHHHHHHHHHhhcccCccCCCChhhHHHHHHHHHHhhhhhcCChhhhHHHhhhCCC---hhhHHHHHHHHHHHHhh
Q 002082 329 CPIAVSARKLIVQLCSLTGTVFPSDNGKMQEHHLLQLLSGILEWVDPPDVVAQAIESGKS---ESEMLDGCRALLSIATV 405 (971)
Q Consensus 329 ~~l~~~~l~cL~qLasl~~~~f~~~~~~~r~~yl~~~l~~~~~il~~~~~~~~~~~~gl~---~~~~~e~cr~L~rL~~~ 405 (971)
+++...+++|++++.+...+ . ++.+++..++.++..+..... .+.. .-+ ++.++.+||++.++.+.
T Consensus 258 ~~~~~~a~~~l~~i~~~~~~-----~--~~~~~~~~l~~~~~~~~~~~~---~~~~-~~d~~~~~~~~~l~~l~~~~~~~ 326 (971)
T 2x1g_F 258 NELAESCLKTMVNIIIQPDC-----H--NYPKTAFVLIKMFLDSLSEIT---KTEW-KRENDNEDIIVHIYMLFVSSVER 326 (971)
T ss_dssp HHHHHHHHHHHHHHHHCSGG-----G--GCHHHHHHHHHHHHHHHHHHH---HHHS-SSSCSCSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCccc-----c--ccHHHHHHHHHHHHHhHHHHH---HHHh-cccccchHHHHHHHHHHHHHHHH
Confidence 67888999999999987321 2 456788888877766543211 0111 112 26677899999998876
Q ss_pred cChhhHH-HHhhccCchhHHHHHHHHHHHHHHHHhhhhcccCcchHHHHHHHHHHHHHhhhcccccCCCCCCCh---hhh
Q 002082 406 TTPFVFD-RLLKSIRPFGTLTLLSNLMCEVVKVLMMNNTEEGTWSWEARDILLDTWTTLLVSLDSTGRNVVLPL---EVR 481 (971)
Q Consensus 406 ~~~~~~~-~l~~~~~~~~~l~~L~~lt~~~i~~~~~~~~~~~~~~~es~~~LL~~W~~lv~~~~~~~~~~~~p~---~l~ 481 (971)
+. ..+. .+.+. .......+..+...++......+... ...+.....+.+|..+++.......+...+. ...
T Consensus 327 ~~-~~~~~~~~~~--~~~~~~~l~~~l~~ll~~~~~~~~~~--~~~~v~~~~l~fw~~l~~~~~~~~~~~~~~~~~~~~~ 401 (971)
T 2x1g_F 327 HS-TLLLSGITSA--DPELSILVHRIVQEILHCTDKPGIYP--VEESCSTMALAFWYMLQDEVFAMSNDEQKHKCWEYIK 401 (971)
T ss_dssp TH-HHHHHHHHTC--CHHHHHHHHHHHHHHHHHHHCSSCTT--TTCTTHHHHHHHHHHHHHHHHC-------CHHHHHHH
T ss_pred HH-HHHHHHhccC--cccccHHHHHHHHHHHHHHcCCCCCC--cchhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 53 2221 00000 00001112222222222111111000 0124557788999998773211100000111 122
Q ss_pred hhHHHHHHHHHHhccccccccccCCCCcccchhccH-hHHHHHHHHHHHHHHhcHhhhHHHHHHHHHHHHHHHhcccCCC
Q 002082 482 NAAASLFALIVESELKVASASAMDDNGEFNYLQASI-SAMDERLSSYALIARAAIDATVPLLTRLFSERFARLHQGRGMI 560 (971)
Q Consensus 482 ~~~~~I~~~Yi~srL~~~~~~~~~d~e~de~~~~d~-~~~~eqL~~ia~l~R~~~~~t~~lL~~l~~~~~~~l~~~~~~~ 560 (971)
.+..++....++ ++..++....+ ++|+++++|- .....--+.+-.+++..++..++.+.+.+.+.+..+...
T Consensus 402 ~~~~~ll~~l~~-~~~~p~~~~~~--~~d~~e~~~f~~~R~~~~~~l~~~~~~~~~~~l~~~~~~l~~~l~~~~~~---- 474 (971)
T 2x1g_F 402 PLYAHLTRILVR-KSEQPDEKSLA--KWSSDDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRH---- 474 (971)
T ss_dssp HHHHHHHHHHHH-HTSCCCTTTTS--CSCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHH-HhcCCCccccc--ccCHhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCC----
Confidence 344555555443 34433221111 1111111111 122344555666777777888888888888887766421
Q ss_pred CCchhHHHHHHHHHHHHhHhccCCC-CCcccCchhhhhhhhhhhhcccchHHHHHHHHHHHHHhhcCccccccCCCHHHH
Q 002082 561 DPTETLEELYSLLLITGHVLADEGE-GEIPVVPNAIQTHFVDTIEAAKHPVVLLCGSIIKFAEWSLDPEARASVFSPRLM 639 (971)
Q Consensus 561 ~~~~~~E~L~WLv~i~g~~lad~~~-ge~~~ip~~i~~~~~~~~~~~~d~vv~Lv~~l~~l~~~~l~~~~~~~~~Sp~L~ 639 (971)
+ .-+.+..=.++..|++ ++... ++.+ .+ ..++++.. .+... ...|.+.
T Consensus 475 -~-~~w~~~eaal~~l~~i-ae~~~~~~~~-------------------~l----~~l~~~l~-~l~~~----d~~~~vr 523 (971)
T 2x1g_F 475 -P-THWTKLEACIYSFQSV-AEHFGGEEKR-------------------QI----PRLMRVLA-EIPYE----KLNVKLL 523 (971)
T ss_dssp -T-TCCHHHHHHHHHHHHT-TTC------C-------------------HH----HHHHHHHH-HSCTT----TSCHHHH
T ss_pred -C-CcHHHHHHHHHHHHHH-HhhcChhhhH-------------------HH----HHHHHHHH-hcCcc----ccCHHHH
Confidence 1 1223455566667775 33221 1111 11 12233211 12211 1368999
Q ss_pred HHHHHHHHHHHHhccCCcccccccCCCCCCCCCccccccchhhHHHhhhcCCCCchhHHHHHHHHHHHhccCCCCchhHH
Q 002082 640 EAIVWFLARWSQTYLMPLEEFRDSSTNLCHDTGYQHQSSTSRKALLSFFGEHNQGKPVLDIIVRISMTTLVSYPGEKDLQ 719 (971)
Q Consensus 640 ~a~lwfl~~~~~~Yl~~~~d~~~~~~~~~~~~~~~~~s~~~~~~l~~~fg~~~~~~~vl~~iv~ki~~nL~~w~~e~~v~ 719 (971)
.+.+|.+++++ .|+..+. +-+ ..++..+++.+ + ++|.
T Consensus 524 ~~a~~~l~~~~-~~l~~~~-----------------------~~l----------~~vl~~l~~~l--~-------~~v~ 560 (971)
T 2x1g_F 524 GTALETMGSYC-NWLMENP-----------------------AYI----------PPAINLLVRGL--N-------SSMS 560 (971)
T ss_dssp HHHHHHHHHTH-HHHC---------------------------CH----------HHHHHHHHHHH--H-------SSCH
T ss_pred HHHHHHHHHHH-HHHhcCH-----------------------HHH----------HHHHHHHHHHh--C-------hHHH
Confidence 99999999996 4553110 001 13455555444 2 4677
Q ss_pred HHHHHHHHHHHhccccchhhHHcchHHHHHHHHhhccccccc--cCchhhHHHHHHHHHHHhcCCCchhhHHHHHHHHHH
Q 002082 720 ELTCNQLLHALVRRKNVCVHLVALGSWRELASAFANDKTLIL--LNSTNQRSLAQTLVLSAYGMRNSESSNQYVRDLTRH 797 (971)
Q Consensus 720 ~~t~~~LL~~L~~~~~~~~~l~~l~~~~~L~~~~~~~~~~~~--l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f~~~l~p 797 (971)
..++ ..|..+++... ..+ .|.+..+++.... .+.+ ++.+.+..+|++++.++.+.+ .++...++..++.|
T Consensus 561 ~~A~-~al~~l~~~~~--~~l--~p~~~~ll~~l~~--~l~~~~~~~~~~~~~~~ai~~i~~~~~-~~~~~~~~~~ll~~ 632 (971)
T 2x1g_F 561 AQAT-LGLKELCRDCQ--LQL--KPYADPLLNACHA--SLNTGRMKNSDSVRLMFSIGKLMSLLR-PEEIPKYLDIIVSP 632 (971)
T ss_dssp HHHH-HHHHHHHHHCH--HHH--HHHHHHHHHHHHH--HHHSTTSCHHHHHHHHHHHHHHHHTSC-TTHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHH--Hhc--cccHHHHHHHHHH--HHcCCCCChHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHH
Confidence 7777 88888886532 122 2555555544321 1111 355677789999999987655 45678899999999
Q ss_pred HHHHHHHHhCCCCcccccChhhHHHHHHHHHHHhhchhhccCcC-c--------HHHHHHHHHhhhHHHHHHHHhhcCCh
Q 002082 798 ATAYLVELSGKNDLKNVSQQPDIILLVSCLLERLRGAANATEPR-T--------QKAIYEMGFSVMNPVLLLLEVYKHES 868 (971)
Q Consensus 798 l~~~~~~l~~~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~-s--------~~~lf~~l~~~l~~l~~l~~~y~~~p 868 (971)
+..++.++.+.+.. .++.+..++..+..+.|++.+..++ . ...+..++...++.+..+++.|.+++
T Consensus 633 l~~~l~~~~~~~~~-----~~~~~~~~~~~l~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~~~~~ 707 (971)
T 2x1g_F 633 CFEELQAICQADSK-----TPAARIRTIFRLNMISTLFSSLNTDVDEQATDQPIVQPVLLVMQRTMPIFKRIAEMWVEEI 707 (971)
T ss_dssp HHHHHHHHHTC--------CHHHHHHHHHHHHHHHHHHHHHTC-------------CCHHHHHTTHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHhcCCC-----ChhhHHHHHHHHHHHHHHHhhcCCCcCcccccccCCCchHHHHHHHHHHHHHHHHhccccH
Confidence 99999999765421 2334566778888888888877543 1 23455666677888889888888899
Q ss_pred HHHHHHHHHHHHHHhc
Q 002082 869 AVVYLLLKFVVDWVDG 884 (971)
Q Consensus 869 ~Vv~~iLkf~~elv~n 884 (971)
+|+..+.+++..++..
T Consensus 708 ~v~e~~~~~~~~~~~~ 723 (971)
T 2x1g_F 708 DVLEAACSAMKHAITN 723 (971)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999988888886653
No 8
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=99.57 E-value=3.9e-11 Score=151.11 Aligned_cols=152 Identities=12% Similarity=0.120 Sum_probs=133.9
Q ss_pred CCChHhHHHHHHHHHHHHHHhhCCCC--HHHHHHHHHHhhcCCChHHHHHHHHh--cCCchhHHHHHHHHHHHHHhhccC
Q 002082 22 PADLAKLQSIMHSIEIACSSIQMHVN--PAAAEATILGLCQSPQPYKACQFILE--NSQVANARFQAAAAIRDAAMREWS 97 (971)
Q Consensus 22 ~md~~~l~~~~~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~~~~~~c~~iLe--~S~~~y~~f~a~~~L~~~i~~~W~ 97 (971)
.+|.+.+ ++|.++.+..+.|.+ |++||+.|.+++++|+.+..+..|+. .+.++.++++|+..|++.+.++|.
T Consensus 6 ~~~~~~~----~~l~~~l~~~~s~d~~~r~~Ae~~L~~~~~~p~~~~~l~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~ 81 (852)
T 4fdd_A 6 KPDEQGL----QQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ 81 (852)
T ss_dssp CCCHHHH----HHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTTTSGG
T ss_pred CCChhhH----HHHHHHHHHHhCcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHccC
Confidence 3455666 899999999998853 89999999999999999999999998 578889999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHHHHH
Q 002082 98 FLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFL 177 (971)
Q Consensus 98 ~l~~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl~iL 177 (971)
.+++++|..||+.+++.+. +.++.|+++++.+++.|.|.+|++ .|+++++.+.+.+.+ +++..+..++..|
T Consensus 82 ~~~~~~~~~ik~~ll~~l~----~~~~~vr~~~a~~i~~ia~~~~~~----~wp~ll~~L~~~l~~-~~~~~r~~al~~L 152 (852)
T 4fdd_A 82 NFPNGVTDFIKSECLNNIG----DSSPLIRATVGILITTIASKGELQ----NWPDLLPKLCSLLDS-EDYNTCEGAFGAL 152 (852)
T ss_dssp GCCHHHHHHHHHHHHTTTT----CSSHHHHHHHHHHHHHHHHHTTTT----TCTTHHHHHHHHHSC-SSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHhcCcc----ccHHHHHHHHHHHcC-CCHHHHHHHHHHH
Confidence 9999999999999999753 356799999999999999998765 588899999999975 5678888999999
Q ss_pred HHHHhhhCC
Q 002082 178 ESLVSEFSP 186 (971)
Q Consensus 178 ~~lv~Efs~ 186 (971)
..++.++..
T Consensus 153 ~~i~~~~~~ 161 (852)
T 4fdd_A 153 QKICEDSAE 161 (852)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhHH
Confidence 999988854
No 9
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=99.47 E-value=5.6e-09 Score=133.20 Aligned_cols=143 Identities=10% Similarity=0.126 Sum_probs=124.8
Q ss_pred HHHHHHHHHhhCCCC-HHHHHHHHHHhhcCCChHHHHHHHHhcC-CchhHHHHHHHHHHHHHhhccC------CCCHHHH
Q 002082 33 HSIEIACSSIQMHVN-PAAAEATILGLCQSPQPYKACQFILENS-QVANARFQAAAAIRDAAMREWS------FLTADEK 104 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~-r~~Ae~~L~~f~~~~~~~~~c~~iLe~S-~~~y~~f~a~~~L~~~i~~~W~------~l~~~~k 104 (971)
+++.++.+...+|.+ .+ ||+.|.+++++|+.|..+..|+.+. ....++++|+..||+.|.++|. .+++++|
T Consensus 5 ~~l~~~L~~~~spd~~~r-Ae~~L~~~~~~p~~~~~L~~il~~~~~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~~~k 83 (960)
T 1wa5_C 5 ETVAKFLAESVIASTAKT-SERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNV 83 (960)
T ss_dssp HHHHHHHHHTTSGGGHHH-HHHHHHHHHTSTTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHH
T ss_pred HHHHHHHHHhcCCCHHHH-HHHHHHHhhcCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHH
Confidence 677888888777744 34 9999999999999999999988554 5679999999999999999998 8999999
Q ss_pred HHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHHHHHHHHHhhh
Q 002082 105 KSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEF 184 (971)
Q Consensus 105 ~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl~iL~~lv~Ef 184 (971)
..||+.+++.+... ++.|+++++.+++.|.+..|++ .|+++++++.+.+++ +++.+..-++.+|..++.++
T Consensus 84 ~~ik~~ll~~l~~~----~~~ir~~l~~~ia~ia~~d~p~----~Wp~ll~~L~~~l~s-~~~~~~~~aL~~l~~i~~~~ 154 (960)
T 1wa5_C 84 ELIKKEIVPLMISL----PNNLQVQIGEAISSIADSDFPD----RWPTLLSDLASRLSN-DDMVTNKGVLTVAHSIFKRW 154 (960)
T ss_dssp HHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHSTT----TCTTHHHHHHTTCCS-SCTTHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHhhCcc----chhHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999863 3899999999999999999985 599999999999975 56778888999999988776
Q ss_pred C
Q 002082 185 S 185 (971)
Q Consensus 185 s 185 (971)
.
T Consensus 155 ~ 155 (960)
T 1wa5_C 155 R 155 (960)
T ss_dssp T
T ss_pred H
Confidence 4
No 10
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=99.18 E-value=1.5e-06 Score=108.92 Aligned_cols=190 Identities=13% Similarity=0.090 Sum_probs=145.3
Q ss_pred HHHHHHHHHh-hCCCC--HHHHHHHHHHhhcC--CChHHHHHHHHhcC-CchhHHHHHHHHHHHHHhhc-----------
Q 002082 33 HSIEIACSSI-QMHVN--PAAAEATILGLCQS--PQPYKACQFILENS-QVANARFQAAAAIRDAAMRE----------- 95 (971)
Q Consensus 33 ~~lE~~~~~l-y~~~~--r~~Ae~~L~~f~~~--~~~~~~c~~iLe~S-~~~y~~f~a~~~L~~~i~~~----------- 95 (971)
.++.++.+.. +.|.+ |++||+.|.+++++ |+.|..+..||.++ .++.++++|+..|++.+.++
T Consensus 4 ~~l~~~L~~~~~s~d~~~r~~Ae~~L~~~~~~~~~~~~~~l~~il~~~~~~~~vR~~A~~~lk~~i~~~w~~~~~~~~~~ 83 (861)
T 2bpt_A 4 AEFAQLLENSILSPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQR 83 (861)
T ss_dssp HHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcccCcCHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCCCCChHHHHHHHHHHHhhccCcChHHHHHHHHh
Confidence 3566777777 77743 89999999999986 88898999999876 57899999999999998765
Q ss_pred cCC-CCHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHH
Q 002082 96 WSF-LTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGI 174 (971)
Q Consensus 96 W~~-l~~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl 174 (971)
|.. +++++|..||+.+++.+. +.++.|+++++++++.|.+..|+. ..|+++++.+.+.+.+..++..+..++
T Consensus 84 ~~~~l~~~~~~~ik~~ll~~l~----~~~~~vr~~~~~~l~~i~~~~~p~---~~w~~ll~~L~~~l~~~~~~~~r~~al 156 (861)
T 2bpt_A 84 WITQVSPEAKNQIKTNALTALV----SIEPRIANAAAQLIAAIADIELPH---GAWPELMKIMVDNTGAEQPENVKRASL 156 (861)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHT----CSSHHHHHHHHHHHHHHHHHHGGG---TCCHHHHHHHHHHTSTTSCHHHHHHHH
T ss_pred HhhhCCHHHHHHHHHHHHHHHC----CCchHHHHHHHHHHHHHHHhhCcc---cccHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 575 999999999999999864 245788999999999999999985 258999999999997522678888999
Q ss_pred HHHHHHHhhhCCCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhcc
Q 002082 175 NFLESLVSEFSPSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLHQILN 254 (971)
Q Consensus 175 ~iL~~lv~Efs~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~~~Ls 254 (971)
.+|..+..++.... + .+ ......|+......+.. + .....+-..+++++..++.
T Consensus 157 ~~l~~l~~~~~~~~------------~---~~-~~~~~~ll~~l~~~l~~--------~--~~~~~vr~~al~~l~~~~~ 210 (861)
T 2bpt_A 157 LALGYMCESADPQS------------Q---AL-VSSSNNILIAIVQGAQS--------T--ETSKAVRLAALNALADSLI 210 (861)
T ss_dssp HHHHHHHHTSSTTS------------S---TT-GGGHHHHHHHHHHHHST--------T--CCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHcCChhh------------h---HH-HHHHHHHHHHHHHhhcC--------C--CCCHHHHHHHHHHHHHHHH
Confidence 99999999876321 0 12 23355555554443321 0 0134566788888888876
Q ss_pred c
Q 002082 255 W 255 (971)
Q Consensus 255 w 255 (971)
|
T Consensus 211 ~ 211 (861)
T 2bpt_A 211 F 211 (861)
T ss_dssp G
T ss_pred H
Confidence 5
No 11
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=98.84 E-value=0.00028 Score=88.32 Aligned_cols=143 Identities=11% Similarity=0.077 Sum_probs=116.0
Q ss_pred HHHHHHHhhCCCC--HHHHHHHHHHhhcC--CChHHHHHHHHhcC-CchhHHHHHHHHHHHHHh-----------hccCC
Q 002082 35 IEIACSSIQMHVN--PAAAEATILGLCQS--PQPYKACQFILENS-QVANARFQAAAAIRDAAM-----------REWSF 98 (971)
Q Consensus 35 lE~~~~~ly~~~~--r~~Ae~~L~~f~~~--~~~~~~c~~iLe~S-~~~y~~f~a~~~L~~~i~-----------~~W~~ 98 (971)
|.++.+.++.|.+ |++|++.|.+++++ |+.+..+..+|.+. .++.++.+|+.+|++.+. ++|..
T Consensus 3 l~~~L~~~~s~d~~~r~~A~~~L~~~~~~~~~~~~~~L~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~w~~ 82 (876)
T 1qgr_A 3 LITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLA 82 (876)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhcChhhHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHhHHHHHhhhcc
Confidence 5566677777743 89999999999987 77888888888765 578999999999999874 67999
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCC-ChhHHHHHHHHH
Q 002082 99 LTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIH-GVDTQFIGINFL 177 (971)
Q Consensus 99 l~~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~-~~~~~~igl~iL 177 (971)
++++.|..||+.+++.+.. .++.+ ++++++++.|.+..++. .+|+.+++.+.+.+.+.. ++..+..++..|
T Consensus 83 l~~~~~~~ik~~ll~~l~~----~~~~~-~~~~~~l~~i~~~~~~~---~~w~~ll~~l~~~l~~~~~~~~~r~~al~~l 154 (876)
T 1qgr_A 83 IDANARREVKNYVLHTLGT----ETYRP-SSASQCVAGIACAEIPV---NQWPELIPQLVANVTNPNSTEHMKESTLEAI 154 (876)
T ss_dssp SCHHHHHHHHHHHHHHTTT----CCSSS-CHHHHHHHHHHHHHGGG---TCCTTHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCC----CcHHH-HHHHHHHHHHHHhhCcc---cccHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 9999999999999997743 23445 89999999999998863 258889999999887522 667788899999
Q ss_pred HHHHhhhC
Q 002082 178 ESLVSEFS 185 (971)
Q Consensus 178 ~~lv~Efs 185 (971)
..++.++.
T Consensus 155 ~~l~~~~~ 162 (876)
T 1qgr_A 155 GYICQDID 162 (876)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhcC
Confidence 99887763
No 12
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=98.50 E-value=6.4e-07 Score=103.39 Aligned_cols=186 Identities=12% Similarity=0.074 Sum_probs=140.7
Q ss_pred HHHHHHHHhhCCCC--HHHHHHHHHHhhc--CCChHHHHHHHHhcCC-chhHHHHHHHHHHHHHhhc-----------cC
Q 002082 34 SIEIACSSIQMHVN--PAAAEATILGLCQ--SPQPYKACQFILENSQ-VANARFQAAAAIRDAAMRE-----------WS 97 (971)
Q Consensus 34 ~lE~~~~~ly~~~~--r~~Ae~~L~~f~~--~~~~~~~c~~iLe~S~-~~y~~f~a~~~L~~~i~~~-----------W~ 97 (971)
+|.++.+.++.|.+ |++||+.|.++++ .|+.+..+..||.+++ .+.++.+|+..|++.+.++ |.
T Consensus 2 ~l~~~L~~~~s~d~~~r~~Ae~~L~~~~~~~~~~~~~~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~ 81 (462)
T 1ibr_B 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWL 81 (462)
T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhccccchHHHHHHHhhhh
Confidence 36677778888753 8999999999997 4888888888898764 7899999999999999776 68
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCC-ChhHHHHHHHH
Q 002082 98 FLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIH-GVDTQFIGINF 176 (971)
Q Consensus 98 ~l~~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~-~~~~~~igl~i 176 (971)
.+++++|..||+.+++.+.. .++.| ++++.+++.|.+..|++ ..|+.+++.+.+.+.+.. ++..+..++.+
T Consensus 82 ~l~~~~~~~ik~~ll~~l~~----~~~~v-~~~~~~i~~ia~~~~~~---~~w~~ll~~L~~~l~~~~~~~~~r~~al~~ 153 (462)
T 1ibr_B 82 AIDANARREVKNYVLQTLGT----ETYRP-SSASQCVAGIACAEIPV---NQWPELIPQLVANVTNPNSTEHMKESTLEA 153 (462)
T ss_dssp TSCHHHHHHHHHHHHHHTTC----CCSSS-CSHHHHHHHHHHHHGGG---TCCTTHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhCC----CCchh-hHHHHHHHHHHHHhccc---cccHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 89999999999999997643 23456 89999999999999875 258889999999997522 67888899999
Q ss_pred HHHHHhhhCCCCCCCCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhccc
Q 002082 177 LESLVSEFSPSTSSAMGLPREFHEQCRISLELDYLKTFYCWARDAALSVTKQIIESDAAASEVKACTAALRLLHQILNW 255 (971)
Q Consensus 177 L~~lv~Efs~~~ss~~gl~~~~Hrk~~~~f~~~~L~~if~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~L~l~~~~Lsw 255 (971)
|..++.++.... + ...+..++......|+. + .....+-..+++++.+++.+
T Consensus 154 l~~l~~~~~~~~-----------------~-~~~~~~ll~~l~~~l~~--------~--~~~~~vr~~a~~~l~~~~~~ 204 (462)
T 1ibr_B 154 IGYICQDIDPEQ-----------------L-QDKSNEILTAIIQGMRK--------E--EPSNNVKLAATNALLNSLEF 204 (462)
T ss_dssp HHHHHHHSCGGG-----------------T-GGGHHHHHHHHHHHHST--------T--CCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhCCchh-----------------h-HhHHHHHHHHHHHHhCC--------C--CCCHHHHHHHHHHHHHHHHH
Confidence 999998874210 1 23344555555444421 0 00245666778888777643
No 13
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=81.95 E-value=12 Score=48.42 Aligned_cols=145 Identities=9% Similarity=0.027 Sum_probs=99.7
Q ss_pred HHHHHHHHHhhCCCC--HHHHHHHHHHhhcCC------C----hHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCC
Q 002082 33 HSIEIACSSIQMHVN--PAAAEATILGLCQSP------Q----PYKACQFILENSQVANARFQAAAAIRDAAMREWSFLT 100 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~------~----~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~ 100 (971)
.++.++.+.+.+|.+ |.+|++-|.+.-+.+ . -.......|. ++++.++..|+..|...+.. ++
T Consensus 6 ~~l~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~-d~~~~vR~~A~~~L~~l~~~----~~ 80 (1230)
T 1u6g_C 6 YHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLE-DKNGEVQNLAVKCLGPLVSK----VK 80 (1230)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHTT----SC
T ss_pred hHHHHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHh----CC
Confidence 567888888877743 888987777654332 1 1222334444 67899999999999888764 67
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCC-----CCCchhhHHHHHHHHhccCCChhHHHHHHH
Q 002082 101 ADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDF-----TSSDKEAFFSQVHQAVLGIHGVDTQFIGIN 175 (971)
Q Consensus 101 ~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~-----~~~~~~~~~~~i~~~l~~~~~~~~~~igl~ 175 (971)
.+.+..++..|++-+. +....||...+..+..|.+.-..+. ....|+.+++.+.+.+....++..+.-++.
T Consensus 81 ~~~~~~i~~~Ll~~l~----d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~ 156 (1230)
T 1u6g_C 81 EYQVETIVDTLCTNML----SDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALD 156 (1230)
T ss_dssp HHHHHHHHHHHHHHTT----CSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHH
Confidence 7666666666666542 4556789999999999988765431 011366788888888863356778888999
Q ss_pred HHHHHHhhhCC
Q 002082 176 FLESLVSEFSP 186 (971)
Q Consensus 176 iL~~lv~Efs~ 186 (971)
+|..++..++.
T Consensus 157 ~l~~~~~~~~~ 167 (1230)
T 1u6g_C 157 IMADMLSRQGG 167 (1230)
T ss_dssp HHHHHHHHTCS
T ss_pred HHHHHHHHhHh
Confidence 99998876654
No 14
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=72.60 E-value=43 Score=32.33 Aligned_cols=122 Identities=12% Similarity=0.062 Sum_probs=68.1
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHHHh---cCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHH--
Q 002082 33 HSIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFILE---NSQVANARFQAAAAIRDAAMREWSFLTADEKKSL-- 107 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~iLe---~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~l-- 107 (971)
..+|+|+......+|-...-++--..+..++....+-..|. +++|+.++++|+.+|+..+.+.- ..-..++
T Consensus 18 ~~IekATs~~~~~~Dw~~~leicD~I~~~~~~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG----~~Fh~evas 93 (163)
T 1x5b_A 18 QDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCG----KIFHLEVCS 93 (163)
T ss_dssp HHHHHHTCTTCSSCCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTC----HHHHHHHTS
T ss_pred HHHHHHcCCCCCCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhh----HHHHHHHhh
Confidence 55888887776556654444554444555544444333331 46899999999999999999864 3333222
Q ss_pred HHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCC-chhhHHHHHHHHhcc
Q 002082 108 IGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSS-DKEAFFSQVHQAVLG 163 (971)
Q Consensus 108 r~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~-~~~~~~~~i~~~l~~ 163 (971)
|.|+-+++.-..+...+-|++++..++ ++|-+..+. ..-..+.++-+.++.
T Consensus 94 ~~Fl~el~~l~~~~~~~~Vk~kil~li-----~~W~~~f~~~~~l~~i~~~Y~~Lk~ 145 (163)
T 1x5b_A 94 RDFATEVRAVIKNKAHPKVCEKLKSLM-----VEWSEEFQKDPQFSLISATIKSMKE 145 (163)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHH-----HHHHHHTTTCSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHH-----HHHHHHhcCCcccHHHHHHHHHHHH
Confidence 445433211111234567888877654 234332211 122355666666553
No 15
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=70.21 E-value=40 Score=33.76 Aligned_cols=136 Identities=12% Similarity=0.100 Sum_probs=82.4
Q ss_pred HHHHHHHhhCCCC--HHHHHHHHHHhhcCC----------ChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHH
Q 002082 35 IEIACSSIQMHVN--PAAAEATILGLCQSP----------QPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTAD 102 (971)
Q Consensus 35 lE~~~~~ly~~~~--r~~Ae~~L~~f~~~~----------~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~ 102 (971)
++.+.+.+..+.. |..|-..|..+.... ..++....+|.. .++.++..|+.+|.+.... .++
T Consensus 4 i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~-~~~~v~~~a~~~L~~l~~~-----~~~ 77 (252)
T 4hxt_A 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTS-TDSEVQKEAARALANIASG-----PDE 77 (252)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHTTS-----CHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhC-CCHHHHHHHHHHHHHHHcC-----ChH
Confidence 4555555555431 566666777665443 345555566654 4589999999999887654 244
Q ss_pred HHHHHHH-HHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchh-----hHHHHHHHHhccCCChhHHHHHHHH
Q 002082 103 EKKSLIG-FCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKE-----AFFSQVHQAVLGIHGVDTQFIGINF 176 (971)
Q Consensus 103 ~k~~lr~-~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~-----~~~~~i~~~l~~~~~~~~~~igl~i 176 (971)
.+..+.+ -.+..+...-.+...-|+...+.++..+.... +..+. ..++.+.+++.. .++..+.-++..
T Consensus 78 ~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~-----~~~~~~~~~~~~i~~L~~~l~~-~~~~~~~~a~~~ 151 (252)
T 4hxt_A 78 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP-----DEAIKAIVDAGGVEVLVKLLTS-TDSEVQKEAARA 151 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSC-----HHHHHHHHHTTHHHHHHHHTTC-SCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-----HHHHHHHHHCCCHHHHHHHHcC-CCHHHHHHHHHH
Confidence 4444332 23444444433456778888888888886411 11111 356677788874 566777788888
Q ss_pred HHHHHh
Q 002082 177 LESLVS 182 (971)
Q Consensus 177 L~~lv~ 182 (971)
|..+..
T Consensus 152 L~~l~~ 157 (252)
T 4hxt_A 152 LANIAS 157 (252)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 877753
No 16
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=63.66 E-value=38 Score=32.96 Aligned_cols=64 Identities=8% Similarity=-0.113 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHHH---hcCCchhHHHHHHHHHHHHHhhcc
Q 002082 33 HSIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFIL---ENSQVANARFQAAAAIRDAAMREW 96 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~iL---e~S~~~y~~f~a~~~L~~~i~~~W 96 (971)
..+|+|+......+|-...-++.-..+..+.....+...| =++.|+.++++|+++|+..+.+.-
T Consensus 16 ~~IekATs~~l~~~Dw~~ileicD~I~~~~~~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG 82 (171)
T 1juq_A 16 SWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCG 82 (171)
T ss_dssp HHHHHHTCTTCSSCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSH
T ss_pred HHHHHHcCCCCCCcCHHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcC
Confidence 5688888777655565445555555555554444433333 146899999999999999999864
No 17
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=60.66 E-value=56 Score=35.01 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=76.7
Q ss_pred CCCCChHhHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChH-HHHH----HHHhcCCchhHHHHHHHHHHHHHhh
Q 002082 20 GGPADLAKLQSIMHSIEIACSSIQMHVNPAAAEATILGLCQSPQPY-KACQ----FILENSQVANARFQAAAAIRDAAMR 94 (971)
Q Consensus 20 ~~~md~~~l~~~~~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~-~~c~----~iLe~S~~~y~~f~a~~~L~~~i~~ 94 (971)
||.|..+++ ..++..+.+.++...|-++|.+-+.++.. |.-. ..+. ..||++ ++-.+=..+..|.++...
T Consensus 157 ~~~~~~eel---kkki~~lL~EY~~~~D~~EA~~ci~EL~~-p~f~~e~V~~ai~~alE~~-~~~~re~~~~LL~~L~~~ 231 (307)
T 2zu6_B 157 GGQQSVNHL---VKEIDMLLKEYLLSGDISEAEHCLKELEV-PHFHHELVYEAIIMVLEST-GESTFKMILDLLKSLWKS 231 (307)
T ss_dssp STTSCHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHCC-GGGHHHHHHHHHHHHHTCC-SSHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHH---HHHHHHHHHHHHcCCCHHHHHHHHHHcCC-CcchHHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHC
Confidence 345665566 38888899999888789999999999985 3332 2233 445655 334555666777777766
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCC
Q 002082 95 EWSFLTADEKKSLIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLD 144 (971)
Q Consensus 95 ~W~~l~~~~k~~lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d 144 (971)
..++.+|-..=-.-+++.+--..- .-|.+.+.+.+.+++.++.||+.
T Consensus 232 --~~ls~~q~~~Gf~~vl~~l~Dl~l-DiP~A~~~la~~v~~ai~~g~l~ 278 (307)
T 2zu6_B 232 --STITVDQMKRGYERIYNEIPDINL-DVPHSYSVLERFVEECFQAGIIS 278 (307)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHH-HCTTHHHHHHHHHHHHHHHTSSC
T ss_pred --CCCCHHHHHHHHHHHHHhccHhhc-ccccHHHHHHHHHHHHHHCCCCC
Confidence 578888854333333333322220 13566777888999999999987
No 18
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=57.83 E-value=1.1e+02 Score=29.06 Aligned_cols=99 Identities=13% Similarity=0.006 Sum_probs=61.8
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHHH---hcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHH--H
Q 002082 33 HSIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFIL---ENSQVANARFQAAAAIRDAAMREWSFLTADEKKS--L 107 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~iL---e~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~--l 107 (971)
..+|+|+...+..+|-...-++--..+..+.....+-..| =++.|+.++++|+++|+..+.+.-. .-..+ =
T Consensus 14 ~~IekATs~~l~~~dw~~ileicD~I~~~~~~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~----~fh~eias 89 (149)
T 3g2s_A 14 ARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGK----RFHDEVGK 89 (149)
T ss_dssp HHHHHHSCTTCSSCCHHHHHHHHHHGGGSSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCH----HHHHHHTS
T ss_pred HHHHHHcCCCCCCcCHHHHHHHHHHHHCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCH----HHHHHHhh
Confidence 5688888777766675666666666666665444433322 1378999999999999999998643 22222 2
Q ss_pred HHHHHHHHHHcC-----CCChhHHHHHHHHHHH
Q 002082 108 IGFCLCFVMQHA-----SSPEGYVQAKISSVAA 135 (971)
Q Consensus 108 r~~ll~yl~~~~-----~~l~~~V~~~l~~~la 135 (971)
|.|+-+.+--.. ...+.-|++++..++-
T Consensus 90 ~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~ 122 (149)
T 3g2s_A 90 FRFLNELIKVVSPKYLGSRTSEKVKNKILELLY 122 (149)
T ss_dssp HHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCCCCHHHHHHHHHHHH
Confidence 455544332111 1346778888766654
No 19
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=56.50 E-value=88 Score=29.22 Aligned_cols=97 Identities=13% Similarity=0.008 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHH----HhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHH-
Q 002082 33 HSIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFI----LENSQVANARFQAAAAIRDAAMREWSFLTADEKKSL- 107 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~i----Le~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~l- 107 (971)
+.+|+|+...+..+|-...-++--..+..+.....|-.. | +++++.+++.|+++|+..+.+.- ..-..++
T Consensus 8 ~~iekAT~~~l~~~dw~~ileicD~I~~~~~~~k~a~rai~Krl-~~~n~~~ql~AL~LLe~~vkNcG----~~f~~eva 82 (140)
T 3ldz_A 8 QDVEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRV-NHKDPHVAMQALTLLGACVSNCG----KIFHLEVC 82 (140)
T ss_dssp HHHHHHTCTTSSSCCHHHHHHHHHHHTTSTTHHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHSC----HHHHHHHS
T ss_pred HHHHHHcCCCCCCcCHHHHHHHHHHHHCCCcCHHHHHHHHHHHH-cCCChHHHHHHHHHHHHHHHhcC----HHHHHHHh
Confidence 457777766665556555555555555555444443333 3 35789999999999999998863 3333333
Q ss_pred -HHHHHHHHHHcCCCChhHHHHHHHHHHH
Q 002082 108 -IGFCLCFVMQHASSPEGYVQAKISSVAA 135 (971)
Q Consensus 108 -r~~ll~yl~~~~~~l~~~V~~~l~~~la 135 (971)
|.|+-+.+ ...+...+-|++++..++-
T Consensus 83 s~~Fl~el~-~l~~~~~~~Vk~kil~li~ 110 (140)
T 3ldz_A 83 SRDFASEVS-NVLNKGHPKVCEKLKALMV 110 (140)
T ss_dssp SHHHHHHHH-HHHHHSCHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHhccCCHHHHHHHHHHHH
Confidence 44543321 1111235678888766553
No 20
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=53.60 E-value=1.1e+02 Score=33.53 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChH-HHHH----HHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHH
Q 002082 32 MHSIEIACSSIQMHVNPAAAEATILGLCQSPQPY-KACQ----FILENSQVANARFQAAAAIRDAAMREWSFLTADEKKS 106 (971)
Q Consensus 32 ~~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~-~~c~----~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~ 106 (971)
...+..+.+.++...+.++|.+-+.++.. |.-+ ..+. ..||+++ .-.+=..+..|..+... ..++.+|-..
T Consensus 217 kkki~~lL~EY~~s~D~~EA~~ci~EL~~-p~fhhe~V~~av~~aLE~~~-~~~re~~~~LL~~L~~~--glls~~q~~~ 292 (358)
T 3eiq_C 217 VKEIDMLLKEYLLSGDISEAEHCLKELEV-PHFHHELVYEAIVMVLESTG-ESAFKMILDLLKSLWKS--STITIDQMKR 292 (358)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHCC-TTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHT--TCSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHccC-CcchHHHHHHHHHHHHccCc-hHHHHHHHHHHHHHHHC--CCCCHHHHHH
Confidence 37888889998887789999999999985 4332 2333 3456553 33445556777777766 5788887543
Q ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCC
Q 002082 107 LIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLD 144 (971)
Q Consensus 107 lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d 144 (971)
=-.=+++.+--..- .-|.+...+.+.+++.++.||+.
T Consensus 293 Gf~~vl~~ldDl~l-DiP~A~~~la~~varai~~g~l~ 329 (358)
T 3eiq_C 293 GYERIYNEIPDINL-DVPHSYSVLERFVEECFQAGIIS 329 (358)
T ss_dssp HHHHHHHHHHHHHH-HCTTHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHhccHhhc-ccccHHHHHHHHHHHHHHCCCCC
Confidence 22223333332221 13566778888999999999987
No 21
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=48.65 E-value=74 Score=30.37 Aligned_cols=98 Identities=10% Similarity=0.007 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHHH----hcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHH-
Q 002082 33 HSIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFIL----ENSQVANARFQAAAAIRDAAMREWSFLTADEKKSL- 107 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~iL----e~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~l- 107 (971)
..+|+|+......+|-...-++--..+..++....+-..| .++.|+.++++|+++|+..+.+.-. .-..++
T Consensus 19 ~~IekATs~~l~~~Dw~~~leicD~I~~~~~~~k~a~ral~krl~~~~n~~v~l~AL~LLd~~vkNcG~----~fh~eva 94 (157)
T 1elk_A 19 QRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGH----RFHVLVA 94 (157)
T ss_dssp HHHHHHTCTTCSSCCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCH----HHHHHHT
T ss_pred HHHHHHcCCCCCCcCHHHHHHHHHHHhCCCccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCH----HHHHHHh
Confidence 5688888777655564444444444444454444443333 3468899999999999999999643 333332
Q ss_pred -HHHHHHHHHHc--C-CCChhHHHHHHHHHH
Q 002082 108 -IGFCLCFVMQH--A-SSPEGYVQAKISSVA 134 (971)
Q Consensus 108 -r~~ll~yl~~~--~-~~l~~~V~~~l~~~l 134 (971)
+.|+-+++... + .+.+.-|++++..++
T Consensus 95 ~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li 125 (157)
T 1elk_A 95 SQDFVESVLVRTILPKNNPPTIVHDKVLNLI 125 (157)
T ss_dssp SHHHHHHHTHHHHSTTTCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence 44555532221 1 123457887765554
No 22
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=48.48 E-value=95 Score=31.07 Aligned_cols=134 Identities=10% Similarity=0.064 Sum_probs=80.2
Q ss_pred HHHHHHHhhCCC-C-HHHHHHHHHHh-hc---------CCChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHH
Q 002082 35 IEIACSSIQMHV-N-PAAAEATILGL-CQ---------SPQPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTAD 102 (971)
Q Consensus 35 lE~~~~~ly~~~-~-r~~Ae~~L~~f-~~---------~~~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~ 102 (971)
++.+.+.++.+. + +..|-..|..+ .. ....++....+|..+ ++.++..|+.+|.+.... .++
T Consensus 14 ~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~-----~~~ 87 (252)
T 4db8_A 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSP-NEQILQEALWALSNIASG-----GNE 87 (252)
T ss_dssp HHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHTTS-----CHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCC-CHHHHHHHHHHHHHHhcC-----CHH
Confidence 455566666653 2 55565555332 21 123445555666654 488999999999988754 345
Q ss_pred HHHHHHH-HHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCch------hhHHHHHHHHhccCCChhHHHHHHH
Q 002082 103 EKKSLIG-FCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDK------EAFFSQVHQAVLGIHGVDTQFIGIN 175 (971)
Q Consensus 103 ~k~~lr~-~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~------~~~~~~i~~~l~~~~~~~~~~igl~ 175 (971)
.+..+.+ -.+..+.+.-.+....|+...+.++..+... +..+ ...++.+.+++.. +++..+.-++.
T Consensus 88 ~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~------~~~~~~~~~~~~~i~~L~~lL~~-~~~~v~~~a~~ 160 (252)
T 4db8_A 88 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG------GNEQIQAVIDAGALPALVQLLSS-PNEQILQEALW 160 (252)
T ss_dssp HHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTS------CHHHHHHHHHTTHHHHHHHGGGC-SCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcC------CchHHHHHHHCCCHHHHHHHHhC-CCHHHHHHHHH
Confidence 5544433 2444444443334577888888888877421 1112 1256677788864 46677778888
Q ss_pred HHHHHH
Q 002082 176 FLESLV 181 (971)
Q Consensus 176 iL~~lv 181 (971)
.|..+.
T Consensus 161 ~L~~l~ 166 (252)
T 4db8_A 161 ALSNIA 166 (252)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888776
No 23
>1wiz_A DNA-binding protein SATB2; helix bundle, KIAA1034 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=40.99 E-value=24 Score=31.14 Aligned_cols=81 Identities=14% Similarity=0.204 Sum_probs=42.3
Q ss_pred CCCCCCCCCCCCCC--Ch-HhHHHHHHHHHHHHHHhhCCCCHHHHHHH-------HHHhhcCC-ChHHHHHHHHhcCCch
Q 002082 10 GGGGDDGGGGGGPA--DL-AKLQSIMHSIEIACSSIQMHVNPAAAEAT-------ILGLCQSP-QPYKACQFILENSQVA 78 (971)
Q Consensus 10 ~~~~~~~~~~~~~m--d~-~~l~~~~~~lE~~~~~ly~~~~r~~Ae~~-------L~~f~~~~-~~~~~c~~iLe~S~~~ 78 (971)
|+||+.|+|+.++. |. .++ ..++-.-.+.-+.+ .+--|+.+ |-++-+.| .||...+ ...-.
T Consensus 1 ~~~~~~~~~~~~~~~~~iTk~I---~~~Ik~~Lk~~~is-Q~~FA~~VL~rsQgtLs~lLr~P~kPW~~L~----~Gre~ 72 (101)
T 1wiz_A 1 GSSGSSGKPEPTNSSVEVSPDI---YQQVRDELKRASVS-QAVFARVAFNRTQGLLSEILRKEEDPRTASQ----SLLVN 72 (101)
T ss_dssp CCCCCCCCCCCCCCSCCCCTTH---HHHHHHHHHHHTCC-HHHHHHHHHSCCHHHHHHHHHTCCCTTTCCH----HHHHH
T ss_pred CCCCCCCCCCcccchhHhhHHH---HHHHHHHHHHcCCC-HHHHHHHHHHHhhhHHHHHHcCCCCCHHHHH----HHHHH
Confidence 56677777775554 21 222 12333323222222 23445554 34444566 4665432 22445
Q ss_pred hHHHHHHHHHHHHHhhccCCCCHHHHHHHHH
Q 002082 79 NARFQAAAAIRDAAMREWSFLTADEKKSLIG 109 (971)
Q Consensus 79 y~~f~a~~~L~~~i~~~W~~l~~~~k~~lr~ 109 (971)
|++++ .|-.+|.++|.+|.+
T Consensus 73 f~RM~-----------nWL~l~e~eR~eIl~ 92 (101)
T 1wiz_A 73 LRAMQ-----------NFLNLPEVERDRIYQ 92 (101)
T ss_dssp HHHHH-----------HHTTSCHHHHHHHHH
T ss_pred HHHHH-----------HHhcCCHHHHHHHHH
Confidence 55555 799999999988654
No 24
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=40.10 E-value=2.4e+02 Score=26.47 Aligned_cols=97 Identities=10% Similarity=0.052 Sum_probs=53.2
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHHHh---cCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHH--H
Q 002082 34 SIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFILE---NSQVANARFQAAAAIRDAAMREWSFLTADEKKSL--I 108 (971)
Q Consensus 34 ~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~iLe---~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~l--r 108 (971)
.+|+|+...+..+|-...-++--..+..+.....|-..|. ++.|+.++++|+++|+..+.+.- ..-..++ +
T Consensus 5 ~iekATs~~l~~~dw~~~leicD~I~~~~~~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG----~~fh~evas~ 80 (148)
T 1mhq_A 5 WLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCG----EKFHSEVAKF 80 (148)
T ss_dssp HHHHHHCTTCSSCCHHHHHHHHHHHHHSSHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSC----HHHHHHHTSH
T ss_pred HHHHHcCCCCCCcCHHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcC----HHHHHHHhhH
Confidence 3556655554444433333333333333322222222221 47899999999999999999964 4333343 5
Q ss_pred HHHHHHHHHcC-----CCChhHHHHHHHHHH
Q 002082 109 GFCLCFVMQHA-----SSPEGYVQAKISSVA 134 (971)
Q Consensus 109 ~~ll~yl~~~~-----~~l~~~V~~~l~~~l 134 (971)
.|+-+++--.. +..+.-|++++..++
T Consensus 81 ~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li 111 (148)
T 1mhq_A 81 RFLNELIKVLSPKYLGSWATGKVKGRVIEIL 111 (148)
T ss_dssp HHHHHHHHTTCCSTTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCCCCCCHHHHHHHHHHH
Confidence 66655432211 224677888876654
No 25
>2d5u_A N-glycanase 1; pngase, hydrolase; NMR {Mus musculus} SCOP: d.314.1.1
Probab=37.10 E-value=36 Score=31.32 Aligned_cols=15 Identities=20% Similarity=0.206 Sum_probs=13.3
Q ss_pred CCCCCCCCCCCCCCC
Q 002082 10 GGGGDDGGGGGGPAD 24 (971)
Q Consensus 10 ~~~~~~~~~~~~~md 24 (971)
|.||+++++|.|+|+
T Consensus 1 ~~~~~~~~~~~g~m~ 15 (124)
T 2d5u_A 1 GPLGSMASATLGSSS 15 (124)
T ss_dssp CCCCCCCCCCCCCCC
T ss_pred CCCCccCccCcCcch
Confidence 678899999999997
No 26
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=36.72 E-value=2.6e+02 Score=26.78 Aligned_cols=123 Identities=13% Similarity=0.072 Sum_probs=75.3
Q ss_pred HHHHHHHHHHhhcCC----------ChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHHHH-HHHHHHH
Q 002082 48 PAAAEATILGLCQSP----------QPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTADEKKSLIG-FCLCFVM 116 (971)
Q Consensus 48 r~~Ae~~L~~f~~~~----------~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~lr~-~ll~yl~ 116 (971)
|..|-..|..+.... ..++....+|.. .++.++..|+.+|.+.... .++.+..+.+ -.+..+.
T Consensus 29 ~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~-----~~~~~~~i~~~g~i~~L~ 102 (210)
T 4db6_A 29 LQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSS-PNEQILQEALWALSNIASG-----GNEQIQAVIDAGALPALV 102 (210)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHTTS-----CHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcC-CCHHHHHHHHHHHHHHhcC-----CcHHHHHHHHCCCHHHHH
Confidence 566666676666433 334445556654 5788999999999987643 3455444432 1223333
Q ss_pred HcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCc-----hhhHHHHHHHHhccCCChhHHHHHHHHHHHHHh
Q 002082 117 QHASSPEGYVQAKISSVAAQLMKRGWLDFTSSD-----KEAFFSQVHQAVLGIHGVDTQFIGINFLESLVS 182 (971)
Q Consensus 117 ~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~-----~~~~~~~i~~~l~~~~~~~~~~igl~iL~~lv~ 182 (971)
..-.+...-|+...+.++..|.... +.. ....++.+.+++++ +++..+..++..|..+..
T Consensus 103 ~lL~~~~~~v~~~a~~~L~~l~~~~-----~~~~~~~~~~~~i~~L~~ll~~-~~~~v~~~a~~aL~~l~~ 167 (210)
T 4db6_A 103 QLLSSPNEQILQEALWALSNIASGG-----NEQIQAVIDAGALPALVQLLSS-PNEQILQEALWALSNIAS 167 (210)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSC-----HHHHHHHHHTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHHT
T ss_pred HHHcCCcHHHHHHHHHHHHHHHcCC-----HHHHHHHHHcCcHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Confidence 3322345778888888888886411 111 12356777888875 467777888888888763
No 27
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=35.05 E-value=2.4e+02 Score=32.00 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=66.2
Q ss_pred HHHHHHHhhCCCC--HHHHHHHHHHhh-cCCC----------hHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCH
Q 002082 35 IEIACSSIQMHVN--PAAAEATILGLC-QSPQ----------PYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTA 101 (971)
Q Consensus 35 lE~~~~~ly~~~~--r~~Ae~~L~~f~-~~~~----------~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~ 101 (971)
+|.+++.++.+.. +.+|-+.++.+- ...+ ..+..-.+|.+++++.+|+.|+.+|.+.... ++
T Consensus 59 i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~-----~~ 133 (510)
T 3ul1_B 59 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASG-----TS 133 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTS-----CH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcC-----CH
Confidence 7788888887632 455655555542 2222 3556677899999999999999999998754 46
Q ss_pred HHHHHHHH-HHHHHHHHcCCCChhHHHHHHHHHHHHHHh
Q 002082 102 DEKKSLIG-FCLCFVMQHASSPEGYVQAKISSVAAQLMK 139 (971)
Q Consensus 102 ~~k~~lr~-~ll~yl~~~~~~l~~~V~~~l~~~la~i~K 139 (971)
+++..+.+ -.+..+.+.-.+...-|+.+.+.++..|.+
T Consensus 134 e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~ 172 (510)
T 3ul1_B 134 EQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAG 172 (510)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 66655544 233333333334567788888888888863
No 28
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=34.15 E-value=2.4e+02 Score=25.67 Aligned_cols=109 Identities=12% Similarity=0.038 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHH-HH----HHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHH
Q 002082 32 MHSIEIACSSIQMHVNPAAAEATILGLCQSPQPYK-AC----QFILENSQVANARFQAAAAIRDAAMREWSFLTADEKKS 106 (971)
Q Consensus 32 ~~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~-~c----~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~ 106 (971)
...+..+.+.++...|-++|.+-+.++.. |.-.. .+ -.-||+++ +-.+=..+..|..+... ..++.+|-..
T Consensus 7 ~kki~~ll~EY~~~~D~~Ea~~cl~eL~~-p~f~~e~V~~~i~~alE~~~-~~~~e~~~~LL~~L~~~--~~is~~q~~~ 82 (129)
T 2nsz_A 7 VKEIDMLLKEYLLSGDISEAEHCLKELEV-PHFHHELVYEAIVMVLESTG-ESAFKMILDLLKSLWKS--STITIDQMKR 82 (129)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHTC-GGGHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHT--TCSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHhCC-CccHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHHC--CCcCHHHHHH
Confidence 37788888898888788999999999873 43332 23 34456653 33455566677777655 4788887543
Q ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCC
Q 002082 107 LIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDF 145 (971)
Q Consensus 107 lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~ 145 (971)
=-.-+++.+--.. -.-|.+-+.+.+.+++.+.-||+..
T Consensus 83 Gf~~v~~~l~Dl~-lDiP~a~~~l~~~v~~ai~~g~l~~ 120 (129)
T 2nsz_A 83 GYERIYNEIPDIN-LDVPHSYSVLERFVEECFQAGIISK 120 (129)
T ss_dssp HHHHHHHHHHHHH-HHSTTHHHHHHHHHHHHHHTTCSCH
T ss_pred HHHHHHhhChHhh-cCccchHHHHHHHHHHHHHCCCCCH
Confidence 3333333332221 0135567778888999999999873
No 29
>4fdd_B RNA-binding protein FUS; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens}
Probab=32.84 E-value=18 Score=23.86 Aligned_cols=14 Identities=64% Similarity=1.123 Sum_probs=10.3
Q ss_pred CCCCCCCCCCCCCC
Q 002082 11 GGGDDGGGGGGPAD 24 (971)
Q Consensus 11 ~~~~~~~~~~~~md 24 (971)
|||+.+|.|.|.||
T Consensus 2 gg~drgG~gpgKM~ 15 (29)
T 4fdd_B 2 GGGDRGGFGPGKMD 15 (29)
T ss_pred CccccCCcCCcccc
Confidence 55666777778998
No 30
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=31.91 E-value=4.3e+02 Score=26.95 Aligned_cols=107 Identities=14% Similarity=-0.011 Sum_probs=69.9
Q ss_pred cCCchhHHHHHHHHHHHHHhhccCC-CCHHHHHHHHHHHHHHHHHcC-CCChhHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 002082 74 NSQVANARFQAAAAIRDAAMREWSF-LTADEKKSLIGFCLCFVMQHA-SSPEGYVQAKISSVAAQLMKRGWLDFTSSDKE 151 (971)
Q Consensus 74 ~S~~~y~~f~a~~~L~~~i~~~W~~-l~~~~k~~lr~~ll~yl~~~~-~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~ 151 (971)
..+|.-|+--|+.+|...+..--.. .....-......++..++.++ .+--+-++.....++..++...... .
T Consensus 65 ~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~------~ 138 (278)
T 4ffb_C 65 TDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSI------T 138 (278)
T ss_dssp TCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSS------H
T ss_pred ccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcH------H
Confidence 4678889999999998887652111 011112234455666677663 2445667777667766666554322 2
Q ss_pred hHHHHHHHHhccCCChhHHHHHHHHHHHHHhhhCCC
Q 002082 152 AFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFSPS 187 (971)
Q Consensus 152 ~~~~~i~~~l~~~~~~~~~~igl~iL~~lv~Efs~~ 187 (971)
.+++.+...+.. .+|....-.+.+|..++.+|+..
T Consensus 139 ~~~e~l~~~l~~-Knpkv~~~~l~~l~~~l~~fg~~ 173 (278)
T 4ffb_C 139 QSVELVIPFFEK-KLPKLIAAAANCVYELMAAFGLT 173 (278)
T ss_dssp HHHHHHGGGGGC-SCHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHHhCCC
Confidence 367777777764 68888889999999999999764
No 31
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=30.73 E-value=2.2e+02 Score=31.11 Aligned_cols=139 Identities=11% Similarity=0.019 Sum_probs=86.3
Q ss_pred HHHHHHHhhCCCC--HHHHHHHHHHhh---cCC---------ChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCC
Q 002082 35 IEIACSSIQMHVN--PAAAEATILGLC---QSP---------QPYKACQFILENSQVANARFQAAAAIRDAAMREWSFLT 100 (971)
Q Consensus 35 lE~~~~~ly~~~~--r~~Ae~~L~~f~---~~~---------~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~ 100 (971)
++.+++.+..+.. |..|-..|..+- .++ ..++....+|....++.++..|+.+|.+.... +
T Consensus 22 l~~l~~~l~s~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~-----~ 96 (450)
T 2jdq_A 22 TSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASG-----N 96 (450)
T ss_dssp CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSS-----C
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcC-----C
Confidence 5667777765531 666776666642 222 44556666777766899999999999998764 2
Q ss_pred HHHHHH-HHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchh-----hHHHHHHHHhccCCChhHHHHHH
Q 002082 101 ADEKKS-LIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKE-----AFFSQVHQAVLGIHGVDTQFIGI 174 (971)
Q Consensus 101 ~~~k~~-lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~-----~~~~~i~~~l~~~~~~~~~~igl 174 (971)
++.+.. +..-++..+.+.-.+..+-|+...+.++..|...+- ..+. ..++-+.+++....+...+..++
T Consensus 97 ~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~-----~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~ 171 (450)
T 2jdq_A 97 SLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDST-----MCRDYVLDCNILPPLLQLFSKQNRLTMTRNAV 171 (450)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCH-----HHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCH-----HHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHH
Confidence 232222 222344444444334567888888888888875321 1122 24566777776434567777888
Q ss_pred HHHHHHHhh
Q 002082 175 NFLESLVSE 183 (971)
Q Consensus 175 ~iL~~lv~E 183 (971)
..|..+...
T Consensus 172 ~~L~~l~~~ 180 (450)
T 2jdq_A 172 WALSNLCRG 180 (450)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhCC
Confidence 888887753
No 32
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=30.38 E-value=2.8e+02 Score=26.09 Aligned_cols=109 Identities=12% Similarity=0.031 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHH-HH----HHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHH
Q 002082 32 MHSIEIACSSIQMHVNPAAAEATILGLCQSPQPYK-AC----QFILENSQVANARFQAAAAIRDAAMREWSFLTADEKKS 106 (971)
Q Consensus 32 ~~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~-~c----~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~ 106 (971)
...+..+.+.++...|-++|.+-+.++.. |.-.. .+ -.-||++ ++-.+=..+..|..+... ..++.+|-..
T Consensus 9 ~kki~~lL~EY~~~~D~~EA~~cl~EL~~-p~f~~e~V~~~i~~alE~~-~~~~re~~~~LL~~L~~~--~~is~~q~~~ 84 (152)
T 2ion_A 9 VKEIDMLLKEYLLSGDISEAEHCLKELEV-PHFHHELVYEAIVMVLEST-GESAFKMILDLLKSLWKS--STITIDQMKR 84 (152)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHTC-GGGHHHHHHHHHHHHHHCC-SSHHHHHHHHHHHHHHHT--TCSCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHC--CCcCHHHHHH
Confidence 37788889999888788999999999974 43322 23 3445665 344555666777777765 4788888554
Q ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCC
Q 002082 107 LIGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDF 145 (971)
Q Consensus 107 lr~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~ 145 (971)
=-.-+++.+--.. -.-|.+-+.+.+.+++.+.-||+..
T Consensus 85 Gf~~vl~~ldDl~-lDiP~A~~~la~~v~~ai~~g~l~~ 122 (152)
T 2ion_A 85 GYERIYNEIPDIN-LDVPHSYSVLERFVEECFQAGIISK 122 (152)
T ss_dssp HHHHHHHHHHHHH-HHSTTHHHHHHHHHHHHHHTTCSCH
T ss_pred HHHHHHHhChHhc-cCccchHHHHHHHHHHHHHCCCCCH
Confidence 3333333332222 0135567778888999999999873
No 33
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=29.09 E-value=5.9e+02 Score=28.72 Aligned_cols=169 Identities=12% Similarity=0.168 Sum_probs=0.0
Q ss_pred CCchhHHHHHHHHHHHHHhcccc-chhhHHcchHHHHHHHHhhccccccccCchhhHHHHHHHHHHHhcCCCchhhHHHH
Q 002082 713 PGEKDLQELTCNQLLHALVRRKN-VCVHLVALGSWRELASAFANDKTLILLNSTNQRSLAQTLVLSAYGMRNSESSNQYV 791 (971)
Q Consensus 713 ~~e~~v~~~t~~~LL~~L~~~~~-~~~~l~~l~~~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~~l~~~~~~~~~~~~~f 791 (971)
..+..|...++ ..|..++.+.. ....++....+..|.....+. .+.++..-..+|+.+. ..+.+......
T Consensus 304 ~~~~~v~~~a~-~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~------~~~i~~~a~~aL~nl~--~~~~~~~~~v~ 374 (529)
T 3tpo_A 304 ATELPIVTPAL-RAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP------KTNIQKEATWTMSNIT--AGRQDQIQQVV 374 (529)
T ss_dssp CSCHHHHHHHH-HHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS------SHHHHHHHHHHHHHHH--TSCHHHHHHHH
T ss_pred CCChhHHHHHH-HHHHHHHccchHHHHHHhhcccHHHHHHHHcCC------CHHHHHHHHHHHHHHh--cccHHHHHHHH
Q ss_pred HH-HHHHHHHHHHHHhCCCCcccccChhhHHHHHHHHHHHhhchhhccCcCcHHHHHHHHHhhhHHHHHHHHhhcCChHH
Q 002082 792 RD-LTRHATAYLVELSGKNDLKNVSQQPDIILLVSCLLERLRGAANATEPRTQKAIYEMGFSVMNPVLLLLEVYKHESAV 870 (971)
Q Consensus 792 ~~-~l~pl~~~~~~l~~~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~s~~~lf~~l~~~l~~l~~l~~~y~~~p~V 870 (971)
.. ++.|+-..+ .....+++. ..+..|.-++..........+.+ ...++.++.++. ..+++|
T Consensus 375 ~~g~i~~Lv~lL-----------~~~~~~v~~---~A~~aL~nl~~~~~~~~~~~l~~--~g~i~~L~~LL~--~~d~~i 436 (529)
T 3tpo_A 375 NHGLVPFLVGVL-----------SKADFKTQK---AAAWAITNYTSGGTVEQIVYLVH--CGIIEPLMNLLS--AKDTKI 436 (529)
T ss_dssp HTTHHHHHHHHH-----------HSSCHHHHH---HHHHHHHHHHHHSCHHHHHHHHH--TTCHHHHHHGGG--CSCHHH
T ss_pred hcCcHHHHHHHh-----------cCCCHHHHH---HHHHHHHHHHcCCCHHHHHHHHH--CcCHHHHHHHhc--CCCHHH
Q ss_pred HHHHHHHHHHHHh---------------------ccccccCcchhHHHHHHHHHHHHHH
Q 002082 871 VYLLLKFVVDWVD---------------------GQISYLEVQETNIVIDFCTRLLQLY 908 (971)
Q Consensus 871 v~~iLkf~~elv~---------------------n~~~~l~s~~g~~Lf~~~~~li~~Y 908 (971)
+..+|..+..+.+ .++..|...+-.-+++.+.+||+.|
T Consensus 437 ~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~iie~y 495 (529)
T 3tpo_A 437 IQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKY 495 (529)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHH
No 34
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=29.05 E-value=1.4e+02 Score=37.20 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHhccccchhhHHcchH-HHHHHHHhhccccccccCchhhHHHHHHHH
Q 002082 697 VLDIIVRISMTTLVSYPGEKDLQELTCNQLLHALVRRKNVCVHLVALGS-WRELASAFANDKTLILLNSTNQRSLAQTLV 775 (971)
Q Consensus 697 vl~~iv~ki~~nL~~w~~e~~v~~~t~~~LL~~L~~~~~~~~~l~~l~~-~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~ 775 (971)
+++.+++-+...+..|..+.+|++.++ .++..++.....- ..--+|. +..+...+.+. + ...+...++
T Consensus 688 ~~~~i~~~l~~~l~~~~~~~~v~e~~~-~~~~~~~~~~~~~-~~p~l~~~~~~l~~~~~~~------~---~~~~l~l~~ 756 (971)
T 2x1g_F 688 VMQRTMPIFKRIAEMWVEEIDVLEAAC-SAMKHAITNLRSS-FQPMLQDLCLFIVASFQTR------C---CAPTLEISK 756 (971)
T ss_dssp HHHTTHHHHHHHHHHTTTCHHHHHHHH-HHHHHHHHHHHC---CTHHHHHHHHHHHHCC--------C---CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHH-HHHHHHHHhhhhh-ccccHHHHHHHHHHHHhcC------C---chHHHHHHH
Confidence 344444444444555777889999999 8888877653210 0001232 23333332110 1 122455555
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHHHHHHhCCCCcccccChhhHHHHHHHHHHHhhchhhccCcCcHHHHH--HH-HHh
Q 002082 776 LSAYGMRNSESSNQYVRDLTRHATAYLVELSGKNDLKNVSQQPDIILLVSCLLERLRGAANATEPRTQKAIY--EM-GFS 852 (971)
Q Consensus 776 ~l~~~~~~~~~~~~~f~~~l~pl~~~~~~l~~~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~s~~~lf--~~-l~~ 852 (971)
.+.......+.-...+.+++.++...+-.+.+...-......+|++....+++.++ +..+.. .++ .. +.+
T Consensus 757 ~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~pd~~~~~f~ll~~~---l~~~p~----~~~~s~~~l~~ 829 (971)
T 2x1g_F 757 TAIVMFFKDEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQI---IKKIPQ----VLEDKTLAYDR 829 (971)
T ss_dssp HHHTTCCC-----HHHHHHHHHHHHHHHHHHTSCTTTHHHHTHHHHHHHHHHHHHH---HHSSGG----GGGCTTSCHHH
T ss_pred HHHHHhCCCcchHHHHHHHHHHHHHHHHHHHhcccccCCccCchHHHHHHHHHHHH---HHhCcH----HHcCCcccHHH
Confidence 55443333222345677888887777666655430001123466665444443332 221111 111 11 122
Q ss_pred hhHHHHHHHHhhcCChHHHHHHHHHHHHHHhc
Q 002082 853 VMNPVLLLLEVYKHESAVVYLLLKFVVDWVDG 884 (971)
Q Consensus 853 ~l~~l~~l~~~y~~~p~Vv~~iLkf~~elv~n 884 (971)
.++..+..+. .++++++...++|+..++..
T Consensus 830 i~~~~~~~l~--~~~~~~~~s~~~fl~~~i~~ 859 (971)
T 2x1g_F 830 LVFYAQRGMT--LPESGAIRNSIQFLTHFVMQ 859 (971)
T ss_dssp HHHHHHHHHT--SSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC--CCCHHHHHHHHHHHHHHHhc
Confidence 2333333333 57888888999999998776
No 35
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=29.04 E-value=5.1e+02 Score=31.68 Aligned_cols=167 Identities=14% Similarity=0.120 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHhccccchhhHHcchH-HHHHHHHhhccccccccCchhhHHHHHHHH
Q 002082 697 VLDIIVRISMTTLVSYPGEKDLQELTCNQLLHALVRRKNVCVHLVALGS-WRELASAFANDKTLILLNSTNQRSLAQTLV 775 (971)
Q Consensus 697 vl~~iv~ki~~nL~~w~~e~~v~~~t~~~LL~~L~~~~~~~~~l~~l~~-~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~ 775 (971)
+.+-+++-+...+..|..+..+.+.++ .++..++...... ..--+|. +..+...+... +.+ .--.+..+++
T Consensus 680 ~~~~~~~~~~~~l~~~~~~~~v~e~~~-~~l~~~~~~~~~~-~~~~l~~~~~~l~~~~~~~----~~~--~~l~l~~~li 751 (963)
T 2x19_B 680 VLQQVFQLIQKVLSKWLNDAQVVEAVC-AIFEKSVKTLLDD-FAPMVPQLCEMLGRMYSTI----PQA--SALDLTRQLV 751 (963)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHSSST-TGGGHHHHHHHHHHHHHHS----CCH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCchHHHHHHH-HHHHHHHHhhccc-ccccHHHHHHHHHHHHHcC----Ccc--HHHHHHHHHH
Confidence 455566666666667878889999888 8998887653210 0000222 22333333210 001 1111233333
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHHHHHHhCCCCcccccChhhHHHHHHHHHHHhhchhhccCcCcH-HHHHHHHHhhh
Q 002082 776 LSAYGMRNSESSNQYVRDLTRHATAYLVELSGKNDLKNVSQQPDIILLVSCLLERLRGAANATEPRTQ-KAIYEMGFSVM 854 (971)
Q Consensus 776 ~l~~~~~~~~~~~~~f~~~l~pl~~~~~~l~~~~~~~~~~~~~~v~~~v~~ll~~LrGi~~a~~~~s~-~~lf~~l~~~l 854 (971)
+. ++..+ .-..++.+++.++....-.+.+. + ....++++.....++.++- ..+...-. .-. ++...+
T Consensus 752 ~~-f~~~~--~~~~~~~~~l~~~~~~~l~~~~~-~---~~~~pd~~~~~f~ll~~~~---~~~~~~~~~~~~--~~~~i~ 819 (963)
T 2x19_B 752 HI-FAHEP--AHFPPIEALFLLVTSVTLTLFQQ-G---PRDHPDIVDSFMQLLAQAL---KRKPDLFLCERL--DVKAVF 819 (963)
T ss_dssp HH-HTTCT--TTCHHHHHHHHHHHHHHHHHHHH-C---TTTCHHHHHHHHHHHHHHH---HHCGGGGGCTTS--CHHHHH
T ss_pred HH-hCCCc--chHHHHHHHHHHHHHHHHHHHhh-C---cccCchHHHHHHHHHHHHH---HhCcHHHcCCcc--cHHHHH
Confidence 32 12221 12235555655555554444331 1 1224666654444444432 22221100 000 122233
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHHHhcc
Q 002082 855 NPVLLLLEVYKHESAVVYLLLKFVVDWVDGQ 885 (971)
Q Consensus 855 ~~l~~l~~~y~~~p~Vv~~iLkf~~elv~n~ 885 (971)
+.+...+. +.+++++...++|+.+++.+.
T Consensus 820 ~~~~~~l~--~~~~~~~~~~l~~l~~l~~~~ 848 (963)
T 2x19_B 820 QCAVLALK--FPEAPTVKASCGFFTELLPRC 848 (963)
T ss_dssp HHHHHHTT--CSCHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHhcC
Confidence 44444443 689999999999999999763
No 36
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=28.29 E-value=8e+02 Score=30.44 Aligned_cols=201 Identities=7% Similarity=-0.020 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHhccccchhhHHcchHHHHHHHHhhccccccccCchhhHHHHHHHH
Q 002082 696 PVLDIIVRISMTTLVSYPGEKDLQELTCNQLLHALVRRKNVCVHLVALGSWRELASAFANDKTLILLNSTNQRSLAQTLV 775 (971)
Q Consensus 696 ~vl~~iv~ki~~nL~~w~~e~~v~~~t~~~LL~~L~~~~~~~~~l~~l~~~~~L~~~~~~~~~~~~l~~~~~r~l~~aL~ 775 (971)
.++.-+.+.+...|..|+....|.+.++ ..|.-++..-..- -+|....++....+. ....-...|...++
T Consensus 695 ~~f~~~~~~il~~l~~~~~~~~irea~~-~~~~r~i~~lg~~----~~p~lp~~i~~ll~~-----~~~~e~~~fL~l~~ 764 (980)
T 3ibv_A 695 ASFNKASDEIFLILDRMGFNEDIRGAVR-FTSGRIINVVGPD----MLPKVPQLISILLNS-----IDMNELVDVLSFIS 764 (980)
T ss_dssp HHHHHHHHHHHHHHHHSCCSHHHHHHHH-HHHHHHTTTTHHH----HTTTHHHHHHHHHHH-----CCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHH-HHHHHHHHHccHh----HHHHHHHHHHHHHhc-----CCHHHHHHHHHHHH
Confidence 3455566667778888999999998888 8888777653221 234444444443211 12222444555555
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHHHHHHhCCCCccc--ccChhhHHHHHHHHHH-----HhhchhhccCcC-cH----
Q 002082 776 LSAYGMRNSESSNQYVRDLTRHATAYLVELSGKNDLKN--VSQQPDIILLVSCLLE-----RLRGAANATEPR-TQ---- 843 (971)
Q Consensus 776 ~l~~~~~~~~~~~~~f~~~l~pl~~~~~~l~~~~~~~~--~~~~~~v~~~v~~ll~-----~LrGi~~a~~~~-s~---- 843 (971)
.+.....+. -.+.+.+++.|+..+.-.+.+.+.-.+ ....++++..-...+. ++.++..+..++ ..
T Consensus 765 qli~~f~~~--~~~~l~~ll~~l~~~if~~l~~~~~~td~~r~~~~l~r~~~~fl~~i~~~~~~~v~~s~~n~~~l~~~l 842 (980)
T 3ibv_A 765 QLIHIYKDN--MMEITNRMLPTLLMRIFSSLSAAPQGTDDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLI 842 (980)
T ss_dssp HHHHHTTTT--SHHHHHHHHHHHHHHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHHTTCTGGGGSHHHHTTHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCchhhhcCCcchHHHHHHH
Confidence 554433332 566788999999998888877653111 0112224433333332 233333222222 12
Q ss_pred HHHHHHHH--hh-------hHHHHHHHHhhcC---ChHHHHH---HHHHHHHHHhccccccCcchhHHHHHHHHHHHHHH
Q 002082 844 KAIYEMGF--SV-------MNPVLLLLEVYKH---ESAVVYL---LLKFVVDWVDGQISYLEVQETNIVIDFCTRLLQLY 908 (971)
Q Consensus 844 ~~lf~~l~--~~-------l~~l~~l~~~y~~---~p~Vv~~---iLkf~~elv~n~~~~l~s~~g~~Lf~~~~~li~~Y 908 (971)
..++.+-. +. +..+.+++..|.+ -|..-.- +.-+..++..+....++..++..+..|+..+++++
T Consensus 843 ~~l~~~a~~~~d~~~~K~a~~~l~~~v~~~~~~~~~~gf~~f~~~~~~~~f~~p~~~~f~~~Daq~~~~~~e~~~~~k~~ 922 (980)
T 3ibv_A 843 NSILHFANLVGEPATQKSSIALVSKMVSLWGGKDGIAGFENFTLSLTPLCFEMPVNPNFNTRDGQSLVVLGELAGLQKII 922 (980)
T ss_dssp HHHHHHC-----CHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHGGGC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCChHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 22222211 11 5677788888864 1222222 33333344444455566778888999988887663
No 37
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=26.18 E-value=4.6e+02 Score=28.01 Aligned_cols=108 Identities=10% Similarity=-0.004 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHhhcCCChHHHHHHHH----hcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHH
Q 002082 32 MHSIEIACSSIQMHVNPAAAEATILGLCQSPQPYKACQFIL----ENSQVANARFQAAAAIRDAAMREWSFLTADEKKSL 107 (971)
Q Consensus 32 ~~~lE~~~~~ly~~~~r~~Ae~~L~~f~~~~~~~~~c~~iL----e~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~l 107 (971)
...++.+.+.++...|-++|.+-+.++....--...+..++ +++ +-.+=.++..|..+... ..++.++-..=
T Consensus 11 ~k~~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~~~~v~~~i~~~le~~--~~~re~~~~Ll~~L~~~--~~is~~~~~~G 86 (339)
T 1ug3_A 11 EKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERS--AIAREHMGQLLHQLLCA--GHLSTAQYYQG 86 (339)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTC--HHHHHHHHHHHHHHHHT--TSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHcCCcccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHHHC--CCCCHHHHHHH
Confidence 36777788888877777888888777763222223344444 443 34455666667777655 56777775443
Q ss_pred HHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCC
Q 002082 108 IGFCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLD 144 (971)
Q Consensus 108 r~~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d 144 (971)
-.-+++.+--..- .-|.....+...+++.+.-||+.
T Consensus 87 f~~~~~~l~Dl~l-DiP~a~~~La~~v~~~i~~g~l~ 122 (339)
T 1ug3_A 87 LYEILELAEDMEI-DIPHVWLYLAELVTPILQEGGVP 122 (339)
T ss_dssp HHHHHHHHHHHTT-TCTTHHHHHHHHHGGGGSTTSCC
T ss_pred HHHHHhhChHhhc-CccchHHHHHHHHHHHHHCCCCC
Confidence 3334444433331 24667788888888888888877
No 38
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=25.55 E-value=4.4e+02 Score=29.55 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=87.9
Q ss_pred HHHHHHHHHhhCCCC--HHHHHHHHHHhhc-CC----------ChHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCC
Q 002082 33 HSIEIACSSIQMHVN--PAAAEATILGLCQ-SP----------QPYKACQFILENSQVANARFQAAAAIRDAAMREWSFL 99 (971)
Q Consensus 33 ~~lE~~~~~ly~~~~--r~~Ae~~L~~f~~-~~----------~~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l 99 (971)
..++.+.+.+..+.. |..|-..|..+-. .+ ..++....+|..++++.+++.|+.+|.+....
T Consensus 74 ~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~----- 148 (528)
T 4b8j_A 74 ESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASG----- 148 (528)
T ss_dssp -CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTS-----
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCC-----
Confidence 557888888876532 5667777766632 22 24566677888777799999999999998764
Q ss_pred CHHHHHHHHH-HHHHHHHHcCCCChhHHHHHHHHHHHHHHhhcCCCCCCCchhh-----HHHHHHHHhccCCChhHHHHH
Q 002082 100 TADEKKSLIG-FCLCFVMQHASSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEA-----FFSQVHQAVLGIHGVDTQFIG 173 (971)
Q Consensus 100 ~~~~k~~lr~-~ll~yl~~~~~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~-----~~~~i~~~l~~~~~~~~~~ig 173 (971)
+++.+..+.. -.+..+...-.+...-|+...+.++..|...+ +..+.. .++-+.+++....++.....+
T Consensus 149 ~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~-----~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a 223 (528)
T 4b8j_A 149 TSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDS-----PKCRDLVLANGALLPLLAQLNEHTKLSMLRNA 223 (528)
T ss_dssp CHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTC-----HHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHH
T ss_pred CHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCC-----hhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHH
Confidence 3455544332 23334443333346778888888888887421 111222 345566666433456677778
Q ss_pred HHHHHHHHhh
Q 002082 174 INFLESLVSE 183 (971)
Q Consensus 174 l~iL~~lv~E 183 (971)
+..|..+...
T Consensus 224 ~~~L~~L~~~ 233 (528)
T 4b8j_A 224 TWTLSNFCRG 233 (528)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHHcC
Confidence 8888877653
No 39
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=22.53 E-value=1.7e+02 Score=34.40 Aligned_cols=92 Identities=10% Similarity=0.043 Sum_probs=59.3
Q ss_pred CCchhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHcC--CCChhHHHHHHHHHHHHHHhhcCCCCCCCchhh
Q 002082 75 SQVANARFQAAAAIRDAAMREWSFLTADEKKSLIGFCLCFVMQHA--SSPEGYVQAKISSVAAQLMKRGWLDFTSSDKEA 152 (971)
Q Consensus 75 S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~lr~~ll~yl~~~~--~~l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~ 152 (971)
+.|++++-.|+.+|-.... ++ +-.++...+.+.- .+..+|||.+.+.++.++.+.. ++.-+. +.
T Consensus 122 ~~n~~ir~lALr~L~~i~~-------~e----~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~-p~~~~~--~~ 187 (621)
T 2vgl_A 122 SRNPTFMGLALHCIANVGS-------RE----MAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTS-PDLVPM--GD 187 (621)
T ss_dssp SCCHHHHHHHHHHHHHHCC-------HH----HHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHC-GGGCCC--CS
T ss_pred CCCHHHHHHHHHHhhccCC-------HH----HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhC-hhhcCc--hh
Confidence 5677777777777766532 22 4445555555443 4678999999999999999964 342221 24
Q ss_pred HHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 002082 153 FFSQVHQAVLGIHGVDTQFIGINFLESLV 181 (971)
Q Consensus 153 ~~~~i~~~l~~~~~~~~~~igl~iL~~lv 181 (971)
+++.+.+++.. .++.-..-++.++.++.
T Consensus 188 ~~~~l~~lL~d-~d~~V~~~a~~~l~~i~ 215 (621)
T 2vgl_A 188 WTSRVVHLLND-QHLGVVTAATSLITTLA 215 (621)
T ss_dssp CHHHHHHHTTC-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CCccHHHHHHHHHHHHH
Confidence 77888888863 34544455555555554
No 40
>4g4s_P Proteasome assembly chaperone 2; alpha beta, NTN-hydrolase, peptide binding, hydrolase-chaper complex; HET: LDZ; 2.49A {Saccharomyces cerevisiae}
Probab=20.73 E-value=70 Score=33.55 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=23.6
Q ss_pred ccccCCCccchHhhcccchHHHHHHHH
Q 002082 287 CIIVQPGPAWCDALISSGHIVWLLNLY 313 (971)
Q Consensus 287 ~~~~~~p~~Wr~~l~~~~~l~llf~ly 313 (971)
....++|.+|+-++-++..-++|.++|
T Consensus 242 ~~~w~~P~SW~~lfG~~~~~~~f~~~~ 268 (269)
T 4g4s_P 242 IVKFVRPISWQGAYGMADARDKFVDLY 268 (269)
T ss_dssp -CCCCCBGGGGGTTCSSCHHHHHHHHH
T ss_pred cCCccCCCccccccCCCCCchHHHhhc
Confidence 346899999999999999899999998
No 41
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=20.39 E-value=1.1e+03 Score=28.00 Aligned_cols=131 Identities=8% Similarity=-0.022 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhhcC--CC----hHHHHHHHHhcCCchhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHcCCC
Q 002082 48 PAAAEATILGLCQS--PQ----PYKACQFILENSQVANARFQAAAAIRDAAMREWSFLTADEKKSLIGFCLCFVMQHASS 121 (971)
Q Consensus 48 r~~Ae~~L~~f~~~--~~----~~~~c~~iLe~S~~~y~~f~a~~~L~~~i~~~W~~l~~~~k~~lr~~ll~yl~~~~~~ 121 (971)
|+.|.+.|..+... +. -.+.+...|. +.++.++.-|+.+|....... .+.-......++..+...-.+
T Consensus 338 r~~a~~~L~~la~~~~~~~~~~l~~~l~~~l~-~~~~~~R~aa~~alg~i~~~~-----~~~~~~~l~~~l~~l~~~l~d 411 (852)
T 4fdd_A 338 RKCSAAALDVLANVYRDELLPHILPLLKELLF-HHEWVVKESGILVLGAIAEGC-----MQGMIPYLPELIPHLIQCLSD 411 (852)
T ss_dssp HHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHTTTTT-----HHHHGGGHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHHHHcCC
Confidence 56666666555432 11 1223333443 567899999998888766431 222112334455555555556
Q ss_pred ChhHHHHHHHHHHHHHHhhcCCCCCCCchhhHHHHHHHHhccCCChhHHHHHHHHHHHHHhhhC
Q 002082 122 PEGYVQAKISSVAAQLMKRGWLDFTSSDKEAFFSQVHQAVLGIHGVDTQFIGINFLESLVSEFS 185 (971)
Q Consensus 122 l~~~V~~~l~~~la~i~K~~w~d~~~~~~~~~~~~i~~~l~~~~~~~~~~igl~iL~~lv~Efs 185 (971)
..+.|+...+.++.++.+.--.......-..+++.+.+.+.. .++..+.-++..|..+++..+
T Consensus 412 ~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d-~~~~vr~~a~~aL~~l~~~~~ 474 (852)
T 4fdd_A 412 KKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILD-SNKRVQEAACSAFATLEEEAC 474 (852)
T ss_dssp SSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTC-SSHHHHHHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHhh
Confidence 788999999999988875321111122333466677776753 456777788888888876654
Done!