Query 002085
Match_columns 969
No_of_seqs 933 out of 6323
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 11:42:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.1E-72 3.7E-77 697.4 33.3 535 31-570 8-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 2E-57 6.7E-62 561.2 24.5 457 73-535 200-743 (768)
3 4eco_A Uncharacterized protein 100.0 5.6E-58 1.9E-62 553.0 15.1 470 33-534 28-601 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 2.3E-56 7.7E-61 546.4 21.9 455 31-537 265-844 (876)
5 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.1E-54 2.1E-58 460.8 14.6 277 636-961 32-308 (311)
6 3t6q_A CD180 antigen; protein- 100.0 2E-52 7E-57 504.9 28.1 450 73-542 33-545 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-51 5.5E-56 513.7 33.3 472 63-544 14-550 (844)
8 4asz_A BDNF/NT-3 growth factor 100.0 5.3E-53 1.8E-57 455.6 15.4 270 636-925 13-288 (299)
9 4gt4_A Tyrosine-protein kinase 100.0 2.9E-52 1E-56 451.8 18.8 271 636-925 26-305 (308)
10 4aoj_A High affinity nerve gro 100.0 7E-52 2.4E-56 453.2 21.6 270 636-925 41-318 (329)
11 3t6q_A CD180 antigen; protein- 100.0 6.7E-51 2.3E-55 491.6 29.9 463 77-546 16-526 (606)
12 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-50 4.1E-55 496.1 31.3 467 73-541 25-605 (680)
13 3omv_A RAF proto-oncogene seri 100.0 2.2E-51 7.5E-56 442.6 20.5 261 636-925 36-299 (307)
14 3vq2_A TLR4, TOLL-like recepto 100.0 1E-50 3.5E-55 490.0 25.0 461 73-543 32-543 (606)
15 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-50 4.7E-55 440.4 22.0 267 635-946 57-327 (336)
16 4b9d_A Serine/threonine-protei 100.0 3.4E-51 1.2E-55 447.0 17.1 254 635-919 23-276 (350)
17 4fih_A Serine/threonine-protei 100.0 2.9E-50 1E-54 438.9 20.1 250 636-919 74-323 (346)
18 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-48 7.8E-53 475.9 35.8 453 77-534 8-518 (680)
19 3hyh_A Carbon catabolite-derep 100.0 5.7E-50 2E-54 424.4 18.2 251 634-919 11-262 (275)
20 3fpq_A Serine/threonine-protei 100.0 2.1E-49 7.1E-54 424.1 21.0 249 639-919 29-282 (290)
21 4ase_A Vascular endothelial gr 100.0 1.4E-49 4.9E-54 438.3 18.8 273 635-925 63-346 (353)
22 3ubd_A Ribosomal protein S6 ki 100.0 3.2E-50 1.1E-54 432.3 12.3 246 636-915 24-272 (304)
23 4fie_A Serine/threonine-protei 100.0 4.6E-49 1.6E-53 440.1 20.4 251 635-919 150-400 (423)
24 3j0a_A TOLL-like receptor 5; m 100.0 3.2E-48 1.1E-52 483.9 30.2 452 72-537 47-564 (844)
25 2z63_A TOLL-like receptor 4, v 100.0 3.3E-48 1.1E-52 464.7 25.1 459 73-539 28-537 (570)
26 3hmm_A TGF-beta receptor type- 100.0 1.4E-48 4.7E-53 424.6 19.6 266 636-926 3-297 (303)
27 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-48 4.9E-53 471.2 21.8 455 73-538 56-563 (606)
28 2z81_A CD282 antigen, TOLL-lik 100.0 9.1E-49 3.1E-53 467.2 18.9 455 62-542 3-495 (549)
29 4eco_A Uncharacterized protein 100.0 1.1E-48 3.9E-53 471.8 12.8 463 31-541 23-586 (636)
30 4g31_A Eukaryotic translation 100.0 1.1E-47 3.9E-52 414.9 18.5 254 635-919 4-279 (299)
31 4ecn_A Leucine-rich repeat pro 100.0 1.6E-47 5.5E-52 468.2 20.2 418 97-541 323-826 (876)
32 2z63_A TOLL-like receptor 4, v 100.0 2.2E-46 7.7E-51 448.8 27.6 458 77-545 11-519 (570)
33 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-46 5.6E-51 444.4 19.0 430 76-533 3-457 (520)
34 2z81_A CD282 antigen, TOLL-lik 100.0 4.9E-46 1.7E-50 443.6 21.3 463 63-537 12-514 (549)
35 3v5w_A G-protein coupled recep 100.0 4.4E-46 1.5E-50 433.7 20.1 248 635-914 188-439 (689)
36 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-46 7.2E-51 443.4 14.2 436 73-537 21-485 (520)
37 4b99_A Mitogen-activated prote 100.0 4.5E-45 1.6E-49 409.7 20.5 266 636-919 54-344 (398)
38 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-43 5.3E-48 430.0 26.2 481 52-542 12-564 (635)
39 4f9c_A Cell division cycle 7-r 100.0 7.1E-44 2.4E-48 396.0 21.2 202 633-858 18-251 (361)
40 3uto_A Twitchin; kinase, muscl 100.0 2.3E-43 7.8E-48 416.0 22.6 256 632-919 153-410 (573)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-43 7.9E-48 420.9 19.9 441 76-537 34-514 (562)
42 1ogq_A PGIP-2, polygalacturona 100.0 4.6E-43 1.6E-47 385.1 17.8 293 31-328 2-306 (313)
43 3v47_A TOLL-like receptor 5B a 100.0 5.9E-43 2E-47 406.8 18.1 377 97-538 30-413 (455)
44 1jl5_A Outer protein YOPM; leu 100.0 9.4E-43 3.2E-47 401.7 17.2 396 72-545 10-423 (454)
45 1jl5_A Outer protein YOPM; leu 100.0 1.3E-42 4.5E-47 400.4 18.3 375 94-544 8-399 (454)
46 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-42 1.1E-46 411.1 21.0 428 73-514 52-514 (562)
47 3uim_A Brassinosteroid insensi 100.0 1.3E-41 4.4E-46 376.9 21.7 283 634-930 28-315 (326)
48 3fxz_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 367.1 24.3 253 633-919 17-269 (297)
49 2qkw_B Protein kinase; three-h 100.0 2.9E-41 9.8E-46 373.1 22.5 276 633-925 36-314 (321)
50 3fe3_A MAP/microtubule affinit 100.0 2.6E-41 8.8E-46 373.1 22.0 252 633-919 12-264 (328)
51 1o6l_A RAC-beta serine/threoni 100.0 1.6E-41 5.6E-46 375.6 20.1 252 635-919 4-260 (337)
52 2psq_A Fibroblast growth facto 100.0 2.8E-41 9.5E-46 379.9 21.4 272 635-925 80-363 (370)
53 3v8s_A RHO-associated protein 100.0 7.1E-42 2.4E-46 387.5 16.0 256 635-919 68-329 (410)
54 4eqm_A Protein kinase; transfe 100.0 3.6E-41 1.2E-45 367.1 20.9 266 634-926 9-275 (294)
55 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-41 3.5E-46 379.8 16.5 247 635-914 22-269 (353)
56 3zgw_A Maternal embryonic leuc 100.0 2.7E-41 9.1E-46 374.9 19.5 254 632-919 6-260 (347)
57 4dc2_A Protein kinase C IOTA t 100.0 5.1E-41 1.7E-45 378.2 21.5 251 635-914 51-307 (396)
58 1xjd_A Protein kinase C, theta 100.0 2.2E-41 7.5E-46 375.6 17.7 248 635-915 16-264 (345)
59 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-40 5.7E-45 365.1 24.4 260 636-925 10-281 (310)
60 2yab_A Death-associated protei 100.0 6.7E-41 2.3E-45 374.1 21.5 259 631-919 7-272 (361)
61 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-41 4E-46 384.4 15.4 259 636-925 114-373 (377)
62 3p86_A Serine/threonine-protei 100.0 5.7E-41 1.9E-45 367.8 20.3 260 635-925 36-297 (309)
63 3a8x_A Protein kinase C IOTA t 100.0 4.7E-41 1.6E-45 373.7 19.6 251 635-914 8-264 (345)
64 3kul_A Ephrin type-A receptor 100.0 4.6E-41 1.6E-45 371.6 19.4 261 634-925 47-312 (325)
65 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-40 4.1E-45 366.0 22.0 249 635-919 5-258 (318)
66 4fr4_A YANK1, serine/threonine 100.0 4.4E-40 1.5E-44 369.4 27.0 254 635-919 14-271 (384)
67 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-40 1.1E-44 400.8 27.7 437 100-546 34-544 (635)
68 2nru_A Interleukin-1 receptor- 100.0 5.7E-40 1.9E-44 360.4 26.8 271 638-925 33-305 (307)
69 3tki_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 368.1 21.1 257 634-920 5-262 (323)
70 2i0e_A Protein kinase C-beta I 100.0 8.8E-41 3E-45 372.0 19.6 248 634-914 18-266 (353)
71 1rdq_E PKA C-alpha, CAMP-depen 100.0 7E-41 2.4E-45 372.9 18.7 249 635-919 40-293 (350)
72 2qol_A Ephrin receptor; recept 100.0 5.7E-41 1.9E-45 377.6 18.2 261 634-925 43-308 (373)
73 4aw2_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45 383.5 17.4 259 635-919 73-338 (437)
74 1tki_A Titin; serine kinase, m 100.0 1.1E-40 3.8E-45 367.5 19.3 254 633-919 2-257 (321)
75 3soc_A Activin receptor type-2 100.0 1.4E-40 4.8E-45 367.4 20.2 270 635-925 23-317 (322)
76 2y0a_A Death-associated protei 100.0 1.4E-40 5E-45 367.7 19.5 258 632-919 7-271 (326)
77 3soa_A Calcium/calmodulin-depe 100.0 2.8E-40 9.6E-45 378.8 22.3 258 632-919 7-267 (444)
78 2bdw_A Hypothetical protein K1 100.0 2.3E-40 7.8E-45 371.1 21.0 257 633-920 26-285 (362)
79 4euu_A Serine/threonine-protei 100.0 1.2E-39 4E-44 359.9 26.1 273 635-925 8-308 (319)
80 3bz5_A Internalin-J, INLJ; leu 100.0 2.9E-40 9.9E-45 381.2 21.9 362 88-542 33-396 (457)
81 3v47_A TOLL-like receptor 5B a 100.0 2.3E-40 7.9E-45 384.9 20.9 376 61-515 6-413 (455)
82 2r5t_A Serine/threonine-protei 100.0 9.9E-41 3.4E-45 374.2 17.1 256 635-923 37-293 (373)
83 2acx_A G protein-coupled recep 100.0 2E-40 7E-45 386.7 19.9 257 635-919 183-444 (576)
84 3poz_A Epidermal growth factor 100.0 1.2E-40 4.2E-45 368.7 17.2 259 636-926 15-278 (327)
85 3l9p_A Anaplastic lymphoma kin 100.0 8.1E-41 2.8E-45 375.9 15.6 266 635-925 70-344 (367)
86 2vd5_A DMPK protein; serine/th 100.0 1.3E-40 4.3E-45 377.5 17.2 258 635-919 60-327 (412)
87 3ork_A Serine/threonine protei 100.0 4.2E-40 1.4E-44 361.9 20.4 268 631-925 7-280 (311)
88 3kex_A Receptor tyrosine-prote 100.0 1.4E-40 4.9E-45 368.0 16.5 259 636-926 13-276 (325)
89 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.8E-41 3.3E-45 368.9 14.8 251 634-919 7-258 (336)
90 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-40 7.2E-45 386.1 18.3 255 635-914 184-438 (543)
91 2c30_A Serine/threonine-protei 100.0 1.2E-39 4E-44 359.6 23.2 248 638-919 47-294 (321)
92 3vhe_A Vascular endothelial gr 100.0 2.5E-40 8.4E-45 371.9 18.1 273 635-925 21-354 (359)
93 3lb7_A RAF proto-oncogene seri 100.0 1.9E-39 6.4E-44 355.6 24.6 262 635-925 35-299 (307)
94 1luf_A Muscle-specific tyrosin 100.0 2.6E-40 8.7E-45 369.3 17.6 273 635-926 46-335 (343)
95 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.1E-40 2.4E-44 352.0 20.5 258 635-927 7-265 (268)
96 1kob_A Twitchin; kinase, intra 100.0 8.9E-40 3.1E-44 368.3 22.0 259 630-920 45-305 (387)
97 3q4u_A Activin receptor type-1 100.0 8.2E-40 2.8E-44 358.1 20.9 261 634-924 6-300 (301)
98 3niz_A Rhodanese family protei 100.0 8.9E-40 3E-44 359.0 20.7 270 630-919 15-300 (311)
99 4agu_A Cyclin-dependent kinase 100.0 1E-39 3.5E-44 359.1 21.0 266 635-919 2-284 (311)
100 3o0g_A Cell division protein k 100.0 1.4E-39 4.9E-44 354.3 21.8 265 636-919 2-282 (292)
101 4hcu_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44 354.4 16.9 255 636-925 10-265 (269)
102 3c0i_A Peripheral plasma membr 100.0 4.7E-40 1.6E-44 367.5 18.2 260 634-919 22-286 (351)
103 2izr_A Casein kinase I isoform 100.0 6E-40 2.1E-44 363.9 18.9 261 635-925 8-280 (330)
104 3tt0_A Basic fibroblast growth 100.0 8.2E-40 2.8E-44 370.2 20.3 271 636-925 69-351 (382)
105 4ejn_A RAC-alpha serine/threon 100.0 2.4E-40 8.2E-45 382.5 16.3 252 635-919 147-404 (446)
106 2ivs_A Proto-oncogene tyrosine 100.0 6.5E-40 2.2E-44 361.2 19.0 272 635-925 22-310 (314)
107 3ugc_A Tyrosine-protein kinase 100.0 1.3E-40 4.6E-45 363.1 13.1 268 635-925 9-290 (295)
108 3fdn_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 352.0 20.9 250 635-919 8-257 (279)
109 3kk8_A Calcium/calmodulin depe 100.0 2.9E-39 9.8E-44 350.5 22.7 255 634-919 4-261 (284)
110 2zv2_A Calcium/calmodulin-depe 100.0 9.4E-40 3.2E-44 357.0 19.0 254 634-919 11-292 (298)
111 2y94_A 5'-AMP-activated protei 100.0 1.4E-39 4.8E-44 375.3 21.3 256 635-924 15-273 (476)
112 2eue_A Carbon catabolite derep 100.0 9.2E-40 3.1E-44 352.6 18.5 252 633-919 10-262 (275)
113 1opk_A P150, C-ABL, proto-onco 100.0 5E-40 1.7E-44 383.9 17.6 257 636-925 220-477 (495)
114 3dtc_A Mitogen-activated prote 100.0 7.2E-40 2.5E-44 352.6 17.5 257 635-924 6-271 (271)
115 3qup_A Tyrosine-protein kinase 100.0 6.5E-40 2.2E-44 362.7 17.5 267 635-926 22-298 (323)
116 4f0f_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 352.8 20.4 257 635-924 18-287 (287)
117 1rjb_A FL cytokine receptor; k 100.0 1.1E-39 3.9E-44 364.2 19.5 274 635-926 44-334 (344)
118 3p1a_A MYT1 kinase, membrane-a 100.0 9.1E-40 3.1E-44 359.0 18.2 249 634-919 55-304 (311)
119 3qd2_B Eukaryotic translation 100.0 1.5E-39 5E-44 361.4 20.0 255 634-919 4-325 (332)
120 1k9a_A Carboxyl-terminal SRC k 100.0 2E-39 6.9E-44 374.5 21.5 251 635-925 192-444 (450)
121 1qcf_A Haematopoetic cell kina 100.0 8.5E-40 2.9E-44 378.4 18.2 256 636-926 188-444 (454)
122 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-39 4.1E-44 358.9 18.5 273 635-925 22-306 (313)
123 1csn_A Casein kinase-1; phosph 100.0 4.3E-39 1.5E-43 351.8 22.5 261 635-925 9-282 (298)
124 2h34_A Serine/threonine-protei 100.0 4.2E-39 1.5E-43 353.5 22.5 266 632-926 30-296 (309)
125 3gni_B Strad alpha; kinase fol 100.0 3.9E-39 1.3E-43 366.0 22.6 271 635-920 24-334 (389)
126 2w4o_A Calcium/calmodulin-depe 100.0 2E-39 6.9E-44 361.8 19.9 252 634-919 51-305 (349)
127 3uc3_A Serine/threonine-protei 100.0 1.4E-39 4.7E-44 364.8 18.4 254 635-920 19-275 (361)
128 2pmi_A Negative RE, cyclin-dep 100.0 3.7E-39 1.3E-43 355.2 21.4 266 635-919 4-293 (317)
129 2a2a_A Death-associated protei 100.0 2.4E-39 8.1E-44 357.6 19.7 258 632-919 8-272 (321)
130 3kmu_A ILK, integrin-linked ki 100.0 3.4E-39 1.2E-43 347.3 20.4 254 635-925 9-269 (271)
131 1ob3_A PFPK5, cell division co 100.0 2.6E-39 8.7E-44 351.6 19.1 264 636-919 2-280 (288)
132 3lzb_A Epidermal growth factor 100.0 1.3E-39 4.3E-44 360.4 16.9 260 635-926 14-278 (327)
133 2pvf_A Fibroblast growth facto 100.0 2.5E-39 8.6E-44 359.6 19.3 272 635-925 34-317 (334)
134 3op5_A Serine/threonine-protei 100.0 2.5E-39 8.4E-44 364.0 19.4 270 635-925 34-328 (364)
135 1mp8_A Focal adhesion kinase 1 100.0 1.6E-39 5.4E-44 351.9 17.0 258 635-925 14-275 (281)
136 1nxk_A MAP kinase-activated pr 100.0 4.7E-39 1.6E-43 365.2 21.7 258 631-920 56-322 (400)
137 2qr7_A Ribosomal protein S6 ki 100.0 2.4E-39 8.1E-44 359.6 18.8 255 632-919 18-277 (342)
138 3og7_A AKAP9-BRAF fusion prote 100.0 6.4E-39 2.2E-43 348.6 21.5 262 635-925 23-287 (289)
139 3gen_A Tyrosine-protein kinase 100.0 2E-39 7E-44 351.5 17.6 256 635-925 23-279 (283)
140 2x4f_A Myosin light chain kina 100.0 3.2E-39 1.1E-43 363.1 19.6 249 639-919 92-342 (373)
141 3f3z_A Calcium/calmodulin-depe 100.0 5.3E-39 1.8E-43 347.1 20.4 254 632-919 5-261 (277)
142 4eut_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 365.2 21.3 273 635-926 8-309 (396)
143 2i1m_A Macrophage colony-stimu 100.0 2.1E-39 7E-44 360.3 17.5 273 635-925 45-325 (333)
144 1u5q_A Serine/threonine protei 100.0 2.4E-39 8.2E-44 360.7 18.0 251 635-920 53-306 (348)
145 3kn6_A Ribosomal protein S6 ki 100.0 3.4E-39 1.2E-43 356.4 19.0 247 641-919 16-270 (325)
146 2yex_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43 344.8 21.9 256 634-919 5-261 (276)
147 3hko_A Calcium/calmodulin-depe 100.0 4.5E-39 1.5E-43 359.5 19.9 280 631-924 21-337 (345)
148 2wqm_A Serine/threonine-protei 100.0 5E-39 1.7E-43 353.3 19.9 268 634-926 30-297 (310)
149 3kfa_A Tyrosine-protein kinase 100.0 1.6E-39 5.4E-44 353.3 15.7 258 635-925 12-270 (288)
150 3cok_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 348.6 18.2 254 634-919 9-262 (278)
151 3a62_A Ribosomal protein S6 ki 100.0 7.9E-39 2.7E-43 353.9 21.1 252 635-919 16-276 (327)
152 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.5E-39 8.7E-44 373.9 17.8 257 636-927 184-441 (452)
153 2vgo_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43 346.8 20.6 250 635-919 13-262 (284)
154 3oz6_A Mitogen-activated prote 100.0 2.4E-39 8.2E-44 367.5 16.9 268 632-920 5-329 (388)
155 1p4o_A Insulin-like growth fac 100.0 2.6E-39 8.8E-44 357.8 16.7 270 635-926 24-299 (322)
156 1mqb_A Ephrin type-A receptor 100.0 5.8E-39 2E-43 356.2 19.3 260 635-925 43-308 (333)
157 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-39 7.7E-44 390.6 17.2 247 635-914 340-587 (674)
158 2rku_A Serine/threonine-protei 100.0 1.2E-38 3.9E-43 347.6 21.0 253 634-919 13-265 (294)
159 1ua2_A CAK, cell division prot 100.0 9.4E-39 3.2E-43 356.6 20.6 270 633-920 7-292 (346)
160 3ttj_A Mitogen-activated prote 100.0 1.2E-38 4.2E-43 368.3 22.1 264 633-919 59-355 (464)
161 2owb_A Serine/threonine-protei 100.0 1.2E-38 4E-43 354.1 21.1 253 634-919 39-291 (335)
162 4fvq_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 350.6 16.6 252 636-926 8-275 (289)
163 3g33_A Cell division protein k 100.0 6E-39 2.1E-43 352.3 18.4 268 634-919 7-296 (308)
164 3dls_A PAS domain-containing s 100.0 2.1E-39 7.3E-44 359.5 14.8 250 631-920 19-275 (335)
165 3lxl_A Tyrosine-protein kinase 100.0 2.1E-39 7E-44 359.2 14.6 273 636-926 23-303 (327)
166 3pls_A Macrophage-stimulating 100.0 8.7E-39 3E-43 349.4 19.3 258 637-925 22-286 (298)
167 3is5_A Calcium-dependent prote 100.0 9.4E-39 3.2E-43 346.5 19.3 258 632-919 18-278 (285)
168 3gxj_A TGF-beta receptor type- 100.0 5E-40 1.7E-44 360.1 9.4 263 635-927 2-298 (303)
169 1xbb_A Tyrosine-protein kinase 100.0 5.7E-39 1.9E-43 349.4 17.6 258 636-925 16-278 (291)
170 3t9t_A Tyrosine-protein kinase 100.0 4.6E-39 1.6E-43 345.5 16.7 255 636-925 8-263 (267)
171 2y7j_A Phosphorylase B kinase 100.0 1.4E-38 4.6E-43 357.5 20.9 257 633-919 91-359 (365)
172 3bhy_A Death-associated protei 100.0 9.1E-39 3.1E-43 346.4 18.8 260 635-924 4-272 (283)
173 3llt_A Serine/threonine kinase 100.0 1.8E-38 6.3E-43 356.7 21.6 262 634-919 33-355 (360)
174 3brb_A Proto-oncogene tyrosine 100.0 8.1E-39 2.8E-43 352.2 18.1 266 635-925 33-307 (313)
175 2v62_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 354.8 20.4 269 635-925 36-327 (345)
176 4e5w_A Tyrosine-protein kinase 100.0 1.3E-38 4.6E-43 348.6 19.5 267 636-924 21-300 (302)
177 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-38 5.7E-43 372.9 21.5 264 631-925 31-309 (504)
178 3nyv_A Calmodulin-domain prote 100.0 5E-39 1.7E-43 375.9 16.9 261 633-924 23-288 (484)
179 3mdy_A Bone morphogenetic prot 100.0 5E-38 1.7E-42 349.8 24.1 268 632-926 33-331 (337)
180 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.8E-39 2.3E-43 355.1 17.0 269 631-919 29-318 (329)
181 2h6d_A 5'-AMP-activated protei 100.0 1.5E-38 5E-43 343.4 19.1 251 635-919 10-261 (276)
182 3bz5_A Internalin-J, INLJ; leu 100.0 1.5E-38 5E-43 367.0 20.3 356 72-520 41-397 (457)
183 3lij_A Calcium/calmodulin depe 100.0 1.6E-38 5.6E-43 372.0 21.0 256 632-919 33-291 (494)
184 2xir_A Vascular endothelial gr 100.0 7.8E-39 2.7E-43 352.9 17.2 273 635-925 26-309 (316)
185 1u59_A Tyrosine-protein kinase 100.0 1.5E-38 5E-43 345.5 19.1 258 636-925 9-271 (287)
186 3cc6_A Protein tyrosine kinase 100.0 9.8E-39 3.3E-43 345.7 17.6 258 635-925 11-272 (281)
187 2eva_A TAK1 kinase - TAB1 chim 100.0 2.4E-38 8.1E-43 347.1 20.7 254 636-925 8-262 (307)
188 3f66_A Hepatocyte growth facto 100.0 1.3E-38 4.5E-43 347.9 18.4 259 636-925 25-290 (298)
189 2yfx_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43 355.1 16.3 266 635-925 29-303 (327)
190 2zmd_A Dual specificity protei 100.0 1.4E-38 4.8E-43 360.3 19.1 253 636-920 56-321 (390)
191 1b6c_B TGF-B superfamily recep 100.0 2.4E-38 8.3E-43 353.1 20.8 265 632-926 38-336 (342)
192 3mwu_A Calmodulin-domain prote 100.0 1.3E-38 4.3E-43 372.4 19.2 262 632-925 18-284 (486)
193 2w5a_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 348.8 13.5 262 635-925 5-273 (279)
194 3dbq_A Dual specificity protei 100.0 1E-38 3.5E-43 355.9 17.5 253 636-920 9-274 (343)
195 3c1x_A Hepatocyte growth facto 100.0 5.6E-39 1.9E-43 360.8 15.1 258 637-925 90-354 (373)
196 3lm5_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 351.8 18.5 259 632-919 24-287 (327)
197 2ac3_A MAP kinase-interacting 100.0 3.3E-38 1.1E-42 347.8 21.1 260 634-919 10-295 (316)
198 3lxp_A Non-receptor tyrosine-p 100.0 3.5E-39 1.2E-43 355.6 13.2 273 634-925 28-309 (318)
199 4aaa_A Cyclin-dependent kinase 100.0 6E-39 2.1E-43 356.1 15.1 266 635-919 24-306 (331)
200 1fvr_A Tyrosine-protein kinase 100.0 9.7E-39 3.3E-43 353.8 16.6 269 635-925 24-299 (327)
201 2jam_A Calcium/calmodulin-depe 100.0 1.4E-38 4.6E-43 348.8 17.4 258 633-924 6-268 (304)
202 1phk_A Phosphorylase kinase; g 100.0 4.9E-38 1.7E-42 343.4 21.6 258 632-919 13-283 (298)
203 4hgt_A Casein kinase I isoform 100.0 3E-38 1E-42 344.7 19.7 261 634-925 7-279 (296)
204 2buj_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 350.3 17.9 262 636-926 29-306 (317)
205 1t4h_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 340.5 22.5 250 636-919 26-282 (290)
206 1qpc_A LCK kinase; alpha beta 100.0 2.1E-38 7.2E-43 342.7 18.1 255 636-925 13-268 (279)
207 3mtl_A Cell division protein k 100.0 6.1E-39 2.1E-43 354.7 14.1 264 636-919 2-281 (324)
208 3g2f_A Bone morphogenetic prot 100.0 1.2E-38 4.3E-43 354.5 16.7 266 635-925 12-317 (336)
209 3eqc_A Dual specificity mitoge 100.0 1.2E-38 4.2E-43 358.1 16.8 264 635-919 32-324 (360)
210 3n9x_A Phosphotransferase; mal 100.0 8.5E-38 2.9E-42 359.2 24.1 206 631-854 21-252 (432)
211 2a19_B Interferon-induced, dou 100.0 6.8E-39 2.3E-43 347.5 14.1 251 633-926 8-274 (284)
212 2wtk_C Serine/threonine-protei 100.0 9E-38 3.1E-42 342.5 23.1 262 634-925 3-271 (305)
213 1cm8_A Phosphorylated MAP kina 100.0 2.8E-38 9.6E-43 355.0 19.5 261 633-919 22-307 (367)
214 3nsz_A CK II alpha, casein kin 100.0 6.4E-38 2.2E-42 347.9 22.2 256 635-919 35-319 (330)
215 3uzp_A CKI-delta, CKID, casein 100.0 4.9E-38 1.7E-42 343.0 20.7 261 634-925 7-279 (296)
216 4fl3_A Tyrosine-protein kinase 100.0 1.5E-38 5E-43 380.9 17.9 251 642-924 375-629 (635)
217 2ozo_A Tyrosine-protein kinase 100.0 2.1E-38 7.1E-43 378.8 19.1 251 643-925 343-597 (613)
218 3byv_A Rhoptry kinase; malaria 100.0 2.2E-39 7.5E-44 366.1 9.7 250 635-919 72-359 (377)
219 2h8h_A Proto-oncogene tyrosine 100.0 9.7E-39 3.3E-43 376.4 15.6 256 636-926 267-523 (535)
220 1o6v_A Internalin A; bacterial 100.0 4E-38 1.4E-42 366.4 20.6 342 74-511 47-389 (466)
221 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-38 4.8E-43 358.8 16.1 257 636-919 62-352 (371)
222 3a7i_A MST3 kinase, serine/thr 100.0 4.5E-38 1.5E-42 344.5 19.7 252 634-920 20-271 (303)
223 1u46_A ACK-1, activated CDC42 100.0 9.9E-39 3.4E-43 347.6 14.0 264 635-927 17-285 (291)
224 1byg_A CSK, protein (C-termina 100.0 1.7E-38 5.9E-43 343.2 15.8 251 635-925 20-272 (278)
225 3sv0_A Casein kinase I-like; t 100.0 6E-38 2.1E-42 362.3 21.3 262 634-925 5-277 (483)
226 3i6u_A CDS1, serine/threonine- 100.0 2.6E-38 8.8E-43 361.7 18.0 257 632-919 131-399 (419)
227 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-38 4.9E-43 356.0 15.3 258 635-920 53-322 (355)
228 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.6E-38 2.9E-42 351.7 21.6 254 636-925 65-338 (365)
229 3kvw_A DYRK2, dual specificity 100.0 7.5E-38 2.6E-42 358.8 21.4 264 632-919 93-408 (429)
230 2jii_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 354.8 15.7 262 636-925 42-335 (352)
231 2xrw_A Mitogen-activated prote 100.0 1.1E-37 3.8E-42 351.2 21.5 264 633-919 22-318 (371)
232 3rp9_A Mitogen-activated prote 100.0 1E-37 3.4E-42 362.2 21.5 200 633-850 50-280 (458)
233 1x8b_A WEE1HU, WEE1-like prote 100.0 7.5E-38 2.6E-42 340.1 18.8 250 634-919 9-279 (289)
234 2w1i_A JAK2; chromosomal rearr 100.0 7.3E-38 2.5E-42 346.5 18.7 268 635-925 40-321 (326)
235 3com_A Serine/threonine-protei 100.0 1.8E-37 6.3E-42 341.5 21.8 252 634-919 27-278 (314)
236 2clq_A Mitogen-activated prote 100.0 2E-37 6.8E-42 338.0 21.8 254 636-919 22-278 (295)
237 2r3i_A Cell division protein k 100.0 1.1E-37 3.7E-42 340.9 19.3 267 635-919 2-283 (299)
238 2ycf_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 346.0 18.1 257 632-919 6-274 (322)
239 1o6v_A Internalin A; bacterial 100.0 4.6E-37 1.6E-41 357.5 25.4 323 72-487 67-389 (466)
240 2vx3_A Dual specificity tyrosi 100.0 7.7E-37 2.6E-41 345.9 25.5 266 632-919 50-372 (382)
241 3mi9_A Cell division protein k 100.0 1E-37 3.6E-42 349.2 18.2 270 633-919 14-311 (351)
242 3qyz_A Mitogen-activated prote 100.0 1.6E-37 5.4E-42 349.3 19.7 263 635-919 26-313 (364)
243 3eb0_A Putative uncharacterize 100.0 9.5E-38 3.2E-42 353.5 17.8 263 634-919 5-321 (383)
244 2wei_A Calmodulin-domain prote 100.0 1.6E-37 5.4E-42 337.3 18.7 262 631-924 17-283 (287)
245 2j7t_A Serine/threonine-protei 100.0 1E-37 3.6E-42 341.5 16.5 255 633-919 16-275 (302)
246 3ll6_A Cyclin G-associated kin 100.0 6.1E-38 2.1E-42 349.1 14.7 256 636-925 28-307 (337)
247 3fme_A Dual specificity mitoge 100.0 2E-37 6.8E-42 337.1 17.5 257 635-919 6-266 (290)
248 2fst_X Mitogen-activated prote 100.0 1.3E-37 4.6E-42 349.0 16.6 261 633-919 26-311 (367)
249 3o6n_A APL1; leucine-rich repe 100.0 1.6E-37 5.4E-42 353.0 17.2 349 53-534 3-353 (390)
250 3oja_B Anopheles plasmodium-re 100.0 1.5E-37 5.2E-42 372.6 17.8 377 52-561 8-386 (597)
251 1j1b_A Glycogen synthase kinas 100.0 9.8E-38 3.4E-42 357.1 15.0 262 635-919 53-336 (420)
252 1z57_A Dual specificity protei 100.0 1.2E-36 4E-41 338.9 23.2 260 634-919 12-328 (339)
253 2b9h_A MAP kinase FUS3, mitoge 100.0 3.1E-37 1.1E-41 345.8 18.1 267 633-919 8-305 (353)
254 2vwi_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 340.6 15.0 268 635-919 14-287 (303)
255 1wak_A Serine/threonine-protei 100.0 1.5E-36 5E-41 346.2 23.6 262 634-919 35-391 (397)
256 4e7w_A Glycogen synthase kinas 100.0 2.2E-37 7.5E-42 351.2 16.5 263 633-919 37-321 (394)
257 2x7f_A TRAF2 and NCK-interacti 100.0 4.6E-37 1.6E-41 340.3 18.3 253 634-919 22-286 (326)
258 3an0_A Dual specificity mitoge 100.0 4.6E-37 1.6E-41 342.4 18.3 261 635-924 50-317 (340)
259 4exu_A Mitogen-activated prote 100.0 1E-36 3.4E-41 343.4 21.1 260 633-919 39-323 (371)
260 2pml_X PFPK7, Ser/Thr protein 100.0 1.2E-37 4.2E-42 348.3 12.8 263 634-919 29-322 (348)
261 2i6l_A Mitogen-activated prote 100.0 6.6E-37 2.3E-41 338.1 18.2 271 633-924 8-312 (320)
262 1blx_A Cyclin-dependent kinase 100.0 8.4E-37 2.9E-41 338.2 19.0 267 634-919 9-296 (326)
263 1zy4_A Serine/threonine-protei 100.0 7.3E-37 2.5E-41 334.8 18.2 254 634-919 4-283 (303)
264 3fhr_A MAP kinase-activated pr 100.0 6.5E-37 2.2E-41 340.0 17.9 255 633-919 25-287 (336)
265 3pg1_A Mitogen-activated prote 100.0 5.4E-37 1.9E-41 345.0 17.5 267 633-919 19-316 (362)
266 3e3p_A Protein kinase, putativ 100.0 1E-36 3.5E-41 342.6 19.2 268 632-919 19-314 (360)
267 2j0j_A Focal adhesion kinase 1 100.0 4.8E-37 1.7E-41 369.1 17.3 258 635-925 389-650 (656)
268 3cek_A Dual specificity protei 100.0 9.6E-37 3.3E-41 335.6 17.9 252 636-919 28-292 (313)
269 2eu9_A Dual specificity protei 100.0 4.9E-36 1.7E-40 336.3 22.8 260 634-919 17-333 (355)
270 3coi_A Mitogen-activated prote 100.0 2.1E-36 7.3E-41 338.7 18.7 261 634-919 22-305 (353)
271 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-37 5.6E-42 342.8 9.2 259 635-926 32-302 (319)
272 3rgf_A Cyclin-dependent kinase 100.0 9.3E-37 3.2E-41 348.1 14.7 272 635-919 19-333 (405)
273 2id5_A Lingo-1, leucine rich r 100.0 3.3E-36 1.1E-40 351.9 19.2 175 77-280 15-189 (477)
274 3aln_A Dual specificity mitoge 100.0 2.9E-36 1E-40 333.9 17.0 260 635-919 21-285 (327)
275 2iwi_A Serine/threonine-protei 100.0 2.1E-36 7.2E-41 332.8 15.4 247 632-919 27-283 (312)
276 3a99_A Proto-oncogene serine/t 100.0 1.2E-36 4E-41 335.7 12.8 246 633-919 40-293 (320)
277 1q8y_A SR protein kinase; tran 100.0 8.7E-36 3E-40 336.7 20.0 266 635-925 18-341 (373)
278 2id5_A Lingo-1, leucine rich r 100.0 2.5E-36 8.6E-41 352.9 15.8 319 124-512 14-335 (477)
279 2dyl_A Dual specificity mitoge 100.0 9.3E-36 3.2E-40 328.6 18.7 254 635-919 24-283 (318)
280 3uqc_A Probable conserved tran 100.0 4.8E-36 1.6E-40 324.5 15.7 237 634-926 29-265 (286)
281 2rio_A Serine/threonine-protei 100.0 1.5E-35 5.1E-40 340.5 18.8 257 636-919 15-295 (434)
282 3qa8_A MGC80376 protein; kinas 100.0 4.1E-36 1.4E-40 353.4 12.0 272 634-925 12-308 (676)
283 3p23_A Serine/threonine-protei 100.0 2.9E-35 9.9E-40 336.9 15.5 248 637-919 25-283 (432)
284 3m2w_A MAP kinase-activated pr 100.0 9.7E-35 3.3E-39 317.2 18.7 238 629-919 10-256 (299)
285 3dzo_A Rhoptry kinase domain; 100.0 3.7E-35 1.3E-39 334.9 11.6 248 636-918 78-362 (413)
286 2pzi_A Probable serine/threoni 100.0 2.4E-34 8.4E-39 349.5 17.3 240 635-923 79-325 (681)
287 4fcg_A Uncharacterized protein 100.0 2.4E-34 8.4E-39 317.4 13.4 262 32-300 24-311 (328)
288 4fmz_A Internalin; leucine ric 100.0 3.2E-33 1.1E-37 312.3 19.4 307 117-510 40-346 (347)
289 4fmz_A Internalin; leucine ric 100.0 5.1E-33 1.7E-37 310.6 19.1 308 92-486 39-346 (347)
290 3o6n_A APL1; leucine-rich repe 100.0 6.2E-33 2.1E-37 315.1 19.2 286 73-392 45-331 (390)
291 3oja_B Anopheles plasmodium-re 100.0 8.2E-33 2.8E-37 331.5 19.0 309 73-440 51-360 (597)
292 2vuw_A Serine/threonine-protei 100.0 4.9E-34 1.7E-38 317.2 5.5 245 635-918 19-329 (336)
293 2ft3_A Biglycan; proteoglycan, 100.0 8.7E-32 3E-36 298.5 20.3 294 75-390 35-331 (332)
294 1ogq_A PGIP-2, polygalacturona 100.0 4.5E-33 1.6E-37 305.4 9.7 249 97-390 50-302 (313)
295 1xku_A Decorin; proteoglycan, 100.0 4.5E-31 1.6E-35 292.5 23.1 295 75-390 33-330 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 3.8E-31 1.3E-35 293.3 22.1 294 98-460 34-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 1.2E-30 4.2E-35 289.0 22.1 295 98-460 32-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.9E-35 1E-39 342.5 -17.1 383 96-536 2-443 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 4.8E-34 1.6E-38 332.3 -15.7 386 74-493 4-447 (461)
300 3ogk_B Coronatine-insensitive 100.0 7.7E-34 2.6E-38 341.6 -14.7 433 63-517 42-533 (592)
301 2z80_A TOLL-like receptor 2, v 100.0 8.3E-31 2.8E-35 293.2 10.5 294 55-396 22-318 (353)
302 2z66_A Variable lymphocyte rec 100.0 4.1E-30 1.4E-34 281.5 8.1 251 62-328 6-262 (306)
303 1ozn_A Reticulon 4 receptor; N 100.0 4.1E-28 1.4E-32 262.7 16.7 261 67-333 5-267 (285)
304 1wwl_A Monocyte differentiatio 100.0 2.6E-30 8.9E-35 283.6 -1.1 267 53-328 21-310 (312)
305 4fcg_A Uncharacterized protein 100.0 3E-28 1E-32 268.6 15.3 266 52-327 31-314 (328)
306 2z80_A TOLL-like receptor 2, v 100.0 5.6E-29 1.9E-33 278.4 9.5 276 98-418 32-318 (353)
307 3g06_A SSPH2 (leucine-rich rep 100.0 5E-28 1.7E-32 286.9 17.3 279 53-393 12-298 (622)
308 3zyi_A Leucine-rich repeat-con 99.9 1.6E-27 5.4E-32 275.9 18.1 245 77-328 58-304 (452)
309 1ozn_A Reticulon 4 receptor; N 99.9 2.3E-27 8E-32 256.7 17.7 250 73-324 32-284 (285)
310 3zyi_A Leucine-rich repeat-con 99.9 1.9E-27 6.4E-32 275.3 18.0 248 98-392 55-303 (452)
311 3zyj_A Leucine-rich repeat-con 99.9 1.8E-27 6.3E-32 274.3 17.8 246 76-328 46-293 (440)
312 3ogk_B Coronatine-insensitive 99.9 6E-31 2E-35 316.4 -11.9 406 112-535 64-528 (592)
313 2z66_A Variable lymphocyte rec 99.9 5.9E-28 2E-32 264.4 11.3 247 100-392 10-261 (306)
314 1wwl_A Monocyte differentiatio 99.9 6.4E-29 2.2E-33 272.5 3.1 254 239-534 39-310 (312)
315 4azs_A Methyltransferase WBDD; 99.9 1.6E-28 5.4E-33 289.5 5.2 189 643-853 241-437 (569)
316 3g06_A SSPH2 (leucine-rich rep 99.9 4.9E-27 1.7E-31 278.4 16.4 266 194-543 41-307 (622)
317 3zyj_A Leucine-rich repeat-con 99.9 1.6E-26 5.5E-31 266.5 17.6 247 99-392 45-292 (440)
318 2o6q_A Variable lymphocyte rec 99.9 5E-26 1.7E-30 244.0 20.1 219 60-283 2-221 (270)
319 3o53_A Protein LRIM1, AGAP0063 99.9 2.1E-28 7.3E-33 269.0 1.4 263 223-538 14-281 (317)
320 3o53_A Protein LRIM1, AGAP0063 99.9 1.5E-28 5.1E-33 270.2 -1.7 266 75-396 12-280 (317)
321 2p1m_B Transport inhibitor res 99.9 1.7E-30 5.8E-35 312.6 -23.6 424 63-510 35-519 (594)
322 3oja_A Leucine-rich immune mol 99.9 5.5E-27 1.9E-31 272.8 3.4 235 97-387 34-270 (487)
323 2z62_A TOLL-like receptor 4, v 99.9 2.6E-25 8.8E-30 239.4 15.0 219 89-330 22-240 (276)
324 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.9E-31 270.1 3.5 232 220-505 35-270 (487)
325 3m19_A Variable lymphocyte rec 99.9 1.3E-24 4.3E-29 230.3 14.7 192 61-282 3-194 (251)
326 2z62_A TOLL-like receptor 4, v 99.9 2.6E-24 9E-29 231.5 17.1 208 74-284 29-241 (276)
327 2p1m_B Transport inhibitor res 99.9 3.8E-28 1.3E-32 292.1 -17.2 412 100-533 46-519 (594)
328 3en9_A Glycoprotease, O-sialog 99.9 6.3E-25 2.2E-29 257.4 9.7 188 639-854 339-538 (540)
329 3rfs_A Internalin B, repeat mo 99.9 1.3E-24 4.3E-29 233.2 10.3 187 351-545 59-247 (272)
330 3rfs_A Internalin B, repeat mo 99.9 4.9E-24 1.7E-28 228.6 14.5 182 94-281 38-219 (272)
331 4glp_A Monocyte differentiatio 99.9 2.3E-24 8E-29 236.0 8.9 228 97-328 64-308 (310)
332 1p9a_G Platelet glycoprotein I 99.9 1.9E-23 6.5E-28 225.8 14.6 205 309-535 5-210 (290)
333 2o6q_A Variable lymphocyte rec 99.9 9.3E-23 3.2E-27 218.5 18.9 201 98-303 17-218 (270)
334 1p9a_G Platelet glycoprotein I 99.9 5.1E-23 1.7E-27 222.4 15.7 197 74-279 11-207 (290)
335 3goz_A Leucine-rich repeat-con 99.9 2.7E-25 9.3E-30 249.1 -3.9 258 78-335 3-305 (362)
336 2xwt_C Thyrotropin receptor; s 99.9 4.9E-23 1.7E-27 216.4 13.3 185 88-280 25-218 (239)
337 3goz_A Leucine-rich repeat-con 99.9 7.8E-25 2.7E-29 245.3 -1.5 264 101-376 2-305 (362)
338 2ast_B S-phase kinase-associat 99.9 3.2E-25 1.1E-29 246.2 -4.9 263 62-335 36-314 (336)
339 1h6u_A Internalin H; cell adhe 99.9 9.8E-23 3.4E-27 222.5 10.1 213 242-511 18-231 (308)
340 3cvr_A Invasion plasmid antige 99.9 7.8E-23 2.7E-27 239.3 9.8 206 54-289 34-252 (571)
341 4glp_A Monocyte differentiatio 99.9 7.5E-23 2.6E-27 224.0 8.4 227 74-304 65-308 (310)
342 2o6s_A Variable lymphocyte rec 99.9 1.3E-21 4.6E-26 200.6 16.9 186 61-268 5-190 (208)
343 2ca6_A RAN GTPase-activating p 99.9 8E-25 2.7E-29 247.8 -8.4 251 258-537 23-320 (386)
344 2xwt_C Thyrotropin receptor; s 99.9 2.9E-22 1E-26 210.4 11.6 197 73-277 31-236 (239)
345 4ay9_X Follicle-stimulating ho 99.9 5.6E-22 1.9E-26 220.9 13.5 236 81-366 17-257 (350)
346 3m19_A Variable lymphocyte rec 99.9 5.7E-22 2E-26 209.8 11.8 159 355-535 35-194 (251)
347 2ast_B S-phase kinase-associat 99.9 1.2E-23 4.2E-28 233.4 -1.2 256 98-399 48-313 (336)
348 2ca6_A RAN GTPase-activating p 99.9 2.7E-24 9.3E-29 243.4 -8.7 242 89-331 24-320 (386)
349 1zar_A RIO2 kinase; serine kin 99.9 8E-22 2.7E-26 211.6 10.6 148 637-828 91-253 (282)
350 1h6u_A Internalin H; cell adhe 99.9 8.3E-22 2.8E-26 215.1 10.4 175 351-538 59-234 (308)
351 3cvr_A Invasion plasmid antige 99.8 1.5E-21 5.1E-26 228.5 10.3 187 291-520 60-253 (571)
352 4ay9_X Follicle-stimulating ho 99.8 5.5E-21 1.9E-25 212.8 13.1 199 100-327 12-215 (350)
353 4b8c_D Glucose-repressible alc 99.8 5.9E-22 2E-26 240.8 4.6 263 32-327 129-404 (727)
354 2o6s_A Variable lymphocyte rec 99.8 2E-20 7E-25 191.8 14.6 152 100-256 10-161 (208)
355 3e6j_A Variable lymphocyte rec 99.8 8.8E-20 3E-24 189.8 15.6 137 54-204 10-146 (229)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-19 3.7E-24 187.8 10.7 137 401-537 32-170 (220)
357 2v9t_B SLIT homolog 2 protein 99.8 4.8E-19 1.6E-23 182.9 14.4 151 77-232 15-165 (220)
358 1m9s_A Internalin B; cell inva 99.8 1E-19 3.6E-24 215.4 9.7 149 353-511 63-211 (605)
359 1h6t_A Internalin B; cell adhe 99.8 3.5E-19 1.2E-23 192.5 11.6 173 351-535 42-215 (291)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-18 5.8E-23 178.8 16.2 159 66-232 7-166 (220)
361 2xot_A Amphoterin-induced prot 99.8 1.1E-18 3.7E-23 195.1 15.9 183 66-280 14-202 (361)
362 2v9t_B SLIT homolog 2 protein 99.8 4.5E-19 1.5E-23 183.2 11.4 140 396-535 27-167 (220)
363 1h6t_A Internalin B; cell adhe 99.8 4.1E-19 1.4E-23 191.9 11.2 171 95-281 44-214 (291)
364 1dce_A Protein (RAB geranylger 99.8 2E-21 7E-26 228.8 -7.8 211 291-527 350-567 (567)
365 2xot_A Amphoterin-induced prot 99.8 9.4E-19 3.2E-23 195.6 12.9 176 100-304 21-203 (361)
366 1m9s_A Internalin B; cell inva 99.8 4.6E-19 1.6E-23 209.9 10.9 192 242-488 20-212 (605)
367 1dce_A Protein (RAB geranylger 99.8 1.9E-20 6.6E-25 220.4 -1.8 214 218-504 348-567 (567)
368 3e6j_A Variable lymphocyte rec 99.8 6.1E-18 2.1E-22 175.9 15.3 152 100-257 22-173 (229)
369 1zth_A RIO1 serine protein kin 99.7 4.2E-18 1.4E-22 180.4 12.9 140 638-802 49-219 (258)
370 4ezg_A Putative uncharacterize 99.7 3.3E-18 1.1E-22 173.6 9.7 153 352-510 41-194 (197)
371 1xeu_A Internalin C; cellular 99.7 1.9E-18 6.6E-23 183.6 6.5 171 95-282 17-187 (263)
372 4ezg_A Putative uncharacterize 99.7 6.8E-18 2.3E-22 171.2 10.0 107 94-204 41-147 (197)
373 1xeu_A Internalin C; cellular 99.7 4.7E-18 1.6E-22 180.6 9.2 170 312-535 17-187 (263)
374 1w8a_A SLIT protein; signaling 99.7 3.4E-18 1.2E-22 172.5 7.1 158 384-544 13-173 (192)
375 4b8c_D Glucose-repressible alc 99.7 4E-18 1.4E-22 207.2 5.2 177 348-534 217-405 (727)
376 1w8a_A SLIT protein; signaling 99.7 8.4E-17 2.9E-21 162.3 12.6 126 76-204 11-137 (192)
377 2ell_A Acidic leucine-rich nuc 99.6 2.1E-16 7.2E-21 155.7 7.7 135 400-537 23-163 (168)
378 2o6r_A Variable lymphocyte rec 99.6 6.9E-16 2.4E-20 153.4 9.8 112 401-512 28-139 (177)
379 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.6E-20 150.2 12.9 129 63-204 7-135 (177)
380 2ell_A Acidic leucine-rich nuc 99.6 8.1E-16 2.8E-20 151.5 10.1 105 97-203 24-130 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 3.1E-15 1.1E-19 150.6 14.5 124 77-204 14-137 (193)
382 2wfh_A SLIT homolog 2 protein 99.6 7.2E-16 2.5E-20 155.3 9.5 109 401-510 31-139 (193)
383 2je0_A Acidic leucine-rich nuc 99.6 3.9E-16 1.3E-20 150.4 6.3 124 75-200 19-147 (149)
384 2je0_A Acidic leucine-rich nuc 99.6 1.8E-15 6.3E-20 145.7 8.0 105 97-203 17-123 (149)
385 3sb4_A Hypothetical leucine ri 99.6 2.7E-16 9.4E-21 173.3 1.7 240 96-362 48-328 (329)
386 4gyi_A RIO2 kinase; protein ki 99.6 3.7E-15 1.3E-19 163.3 10.1 138 638-802 97-265 (397)
387 3sb4_A Hypothetical leucine ri 99.5 4.7E-15 1.6E-19 163.3 6.5 238 72-321 48-328 (329)
388 1a9n_A U2A', U2A'; complex (nu 99.5 4.2E-15 1.4E-19 147.6 4.8 127 401-533 19-153 (176)
389 1a9n_A U2A', U2A'; complex (nu 99.5 7.5E-15 2.6E-19 145.7 5.9 134 351-511 15-154 (176)
390 1ds9_A Outer arm dynein; leuci 99.5 1.2E-16 4.2E-21 162.0 -8.0 135 94-236 15-157 (198)
391 4fs7_A Uncharacterized protein 99.5 3E-13 1E-17 152.8 17.1 330 114-502 64-393 (394)
392 1ds9_A Outer arm dynein; leuci 99.5 4.7E-16 1.6E-20 157.7 -6.1 136 353-515 16-158 (198)
393 4fdw_A Leucine rich hypothetic 99.5 4.2E-13 1.4E-17 150.9 15.2 213 97-322 113-331 (401)
394 2r9u_A Variable lymphocyte rec 99.5 4.1E-13 1.4E-17 132.5 13.3 114 62-182 5-118 (174)
395 3g39_A Variable lymphocyte rec 99.4 3.2E-13 1.1E-17 132.8 12.2 105 76-183 12-116 (170)
396 4fdw_A Leucine rich hypothetic 99.4 3.8E-13 1.3E-17 151.2 14.3 262 121-414 113-383 (401)
397 3g39_A Variable lymphocyte rec 99.4 4E-13 1.4E-17 132.2 11.6 103 99-204 11-113 (170)
398 2r9u_A Variable lymphocyte rec 99.4 7.1E-13 2.4E-17 130.8 11.7 102 100-204 15-116 (174)
399 4fs7_A Uncharacterized protein 99.4 1.8E-12 6.1E-17 146.5 15.3 329 90-478 64-393 (394)
400 2ifg_A High affinity nerve gro 99.3 2.7E-12 9.3E-17 142.4 9.8 108 63-182 8-116 (347)
401 3un9_A NLR family member X1; l 99.3 2.7E-14 9.4E-19 159.0 -7.6 165 354-518 71-260 (372)
402 3un9_A NLR family member X1; l 99.2 4.7E-14 1.6E-18 157.2 -10.7 160 97-256 72-252 (372)
403 2ifg_A High affinity nerve gro 99.2 1.9E-11 6.7E-16 135.5 9.6 101 101-204 12-114 (347)
404 3tm0_A Aminoglycoside 3'-phosp 99.1 8.7E-11 3E-15 124.6 10.7 146 633-801 11-213 (263)
405 4gt6_A Cell surface protein; l 99.1 3.9E-10 1.3E-14 127.2 16.0 89 416-509 302-390 (394)
406 4gt6_A Cell surface protein; l 99.1 1.1E-09 3.6E-14 123.6 15.7 81 401-486 311-391 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 6.4E-10 2.2E-14 117.7 9.2 138 636-801 20-214 (264)
408 2ra8_A Uncharacterized protein 98.9 1.6E-10 5.4E-15 127.4 0.3 205 73-301 107-341 (362)
409 3dxp_A Putative acyl-COA dehyd 98.9 2.8E-09 9.7E-14 118.5 9.8 143 640-801 42-248 (359)
410 2ra8_A Uncharacterized protein 98.8 3.2E-10 1.1E-14 124.9 -2.2 181 350-531 134-341 (362)
411 3sg8_A APH(2'')-ID; antibiotic 98.8 2.7E-09 9.1E-14 115.7 4.7 187 641-854 25-287 (304)
412 3rw6_A Nuclear RNA export fact 98.8 2.4E-10 8.1E-15 119.3 -4.2 66 119-186 168-237 (267)
413 4h09_A Hypothetical leucine ri 98.6 1.4E-07 4.9E-12 105.5 13.8 82 92-178 41-122 (379)
414 4h09_A Hypothetical leucine ri 98.6 1.7E-07 5.8E-12 104.9 12.0 301 164-506 41-342 (379)
415 3rw6_A Nuclear RNA export fact 98.5 2.3E-08 7.9E-13 104.3 2.7 92 421-514 137-237 (267)
416 4gkh_A Aminoglycoside 3'-phosp 98.5 6E-07 2E-11 95.3 12.8 137 642-801 30-223 (272)
417 3r70_A Aminoglycoside phosphot 98.5 5.3E-07 1.8E-11 98.2 12.1 137 637-802 38-238 (320)
418 1io0_A Tropomodulin; LRR prote 98.3 3.4E-08 1.2E-12 98.1 -2.4 66 445-510 89-164 (185)
419 1io0_A Tropomodulin; LRR prote 98.3 5.4E-08 1.8E-12 96.7 -1.9 95 89-183 28-137 (185)
420 3tdw_A Gentamicin resistance p 98.2 7E-06 2.4E-10 88.5 13.8 75 641-725 24-102 (306)
421 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.1E-05 3.7E-10 89.2 12.2 75 640-724 45-122 (362)
422 3d1u_A Putative fructosamine-3 98.1 7.3E-06 2.5E-10 87.3 10.2 76 640-723 19-97 (288)
423 3ats_A Putative uncharacterize 97.9 1E-05 3.5E-10 89.5 7.7 85 641-725 25-122 (357)
424 2olc_A MTR kinase, methylthior 97.8 3.8E-05 1.3E-09 86.2 9.7 79 641-721 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.8 7.7E-05 2.6E-09 81.8 11.1 150 642-800 38-251 (346)
426 3e4g_A ATP synthase subunit S, 97.6 8.1E-06 2.8E-10 78.7 -0.1 37 98-134 62-99 (176)
427 3e4g_A ATP synthase subunit S, 97.6 9.9E-06 3.4E-10 78.1 0.4 84 121-204 61-150 (176)
428 3jr1_A Putative fructosamine-3 97.5 0.00091 3.1E-08 71.6 13.5 76 640-723 40-118 (312)
429 2pyw_A Uncharacterized protein 97.3 0.00065 2.2E-08 76.6 10.9 78 770-851 231-313 (420)
430 1pgv_A TMD-1, tropomodulin TMD 97.0 7.5E-05 2.6E-09 73.4 -1.4 64 444-507 65-136 (197)
431 3dxq_A Choline/ethanolamine ki 97.0 0.0016 5.4E-08 69.8 8.8 74 638-723 20-95 (301)
432 1pgv_A TMD-1, tropomodulin TMD 97.0 6.3E-05 2.1E-09 73.9 -2.1 90 421-510 66-170 (197)
433 1nw1_A Choline kinase (49.2 KD 96.8 0.0026 9E-08 71.6 9.5 74 641-723 78-159 (429)
434 3csv_A Aminoglycoside phosphot 96.8 0.0035 1.2E-07 68.1 9.7 79 642-729 24-105 (333)
435 3rfe_A Platelet glycoprotein I 96.7 0.0014 4.8E-08 60.1 5.4 56 453-510 12-68 (130)
436 3f7w_A Putative fructosamine-3 96.7 0.012 4.3E-07 62.2 13.4 76 639-722 18-96 (288)
437 3feg_A Choline/ethanolamine ki 96.5 0.0028 9.7E-08 69.7 6.8 150 642-801 56-254 (379)
438 2qg7_A Ethanolamine kinase PV0 96.5 0.0063 2.2E-07 68.8 9.4 75 641-723 113-188 (458)
439 3rfe_A Platelet glycoprotein I 96.4 0.0062 2.1E-07 55.7 7.2 37 122-158 32-68 (130)
440 2ppq_A HSK, HK, homoserine kin 96.3 0.0073 2.5E-07 65.2 8.1 153 641-801 27-217 (322)
441 3c5i_A Choline kinase; choline 96.2 0.0084 2.9E-07 66.1 8.4 74 642-723 39-121 (369)
442 1zyl_A Hypothetical protein YI 95.9 0.017 5.8E-07 62.4 9.1 75 642-722 32-113 (328)
443 3i1a_A Spectinomycin phosphotr 95.6 0.013 4.6E-07 63.6 6.4 32 770-801 205-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.5 0.036 1.2E-06 61.1 9.5 154 642-801 58-280 (401)
445 2yle_A Protein spire homolog 1 95.5 0.038 1.3E-06 54.4 8.5 104 721-854 33-136 (229)
446 3mes_A Choline kinase; malaria 92.8 0.099 3.4E-06 58.2 5.8 74 642-723 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 89.5 1 3.5E-05 49.8 9.7 30 772-801 245-280 (401)
448 2ks1_B Epidermal growth factor 84.1 0.61 2.1E-05 32.7 2.4 26 581-606 12-37 (44)
449 2l2t_A Receptor tyrosine-prote 83.8 0.62 2.1E-05 32.6 2.3 26 581-606 11-36 (44)
450 4ann_A ESSB; membrane protein, 79.6 7.7 0.00026 38.0 9.4 115 694-854 43-157 (215)
451 4ano_A ESSB; membrane protein, 72.8 13 0.00045 36.6 9.0 83 694-799 48-131 (219)
452 3cxl_A N-chimerin; SH2, RHO-GA 71.1 0.38 1.3E-05 54.3 -2.8 63 640-706 146-214 (463)
453 2k1k_A Ephrin type-A receptor 64.3 3.9 0.00013 27.7 2.2 28 578-605 9-36 (38)
454 2lz0_A Uncharacterized protein 36.9 81 0.0028 26.5 6.7 46 108-154 7-52 (100)
455 2lz0_A Uncharacterized protein 26.3 83 0.0028 26.4 4.9 39 162-201 13-51 (100)
456 2k9y_A Ephrin type-A receptor 25.4 36 0.0012 23.3 2.0 6 599-604 32-37 (41)
457 2l8s_A Integrin alpha-1; trans 25.2 40 0.0014 24.7 2.2 6 607-612 35-40 (54)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-72 Score=697.44 Aligned_cols=535 Identities=34% Similarity=0.511 Sum_probs=421.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCcceeeCCCeEEEEecCCCCCCC---CC-----------------
Q 002085 31 SPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQK---IP----------------- 90 (969)
Q Consensus 31 ~~~~~~~~all~~k~~~~~~~~l~sw~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~---~~----------------- 90 (969)
...++|++||++||+++.++..+++|+.++|||+|.||+|+.++|+.|+|+++.+.|. +|
T Consensus 8 ~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~ 87 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNS 87 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTS
T ss_pred cCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCC
Confidence 3467899999999999987667899998899999999999988999999999998886 33
Q ss_pred ------ccccCCCcccEEEccCCCCCCCCCc--ccCCCCCCCEEeccCCcCCCCCCCCc-c-------------------
Q 002085 91 ------PIICDLKNLTTIDLSSNSIPGEFPE--FLYNCTKLQNLDLSQNYFVGPIPSDI-D------------------- 142 (969)
Q Consensus 91 ------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~------------------- 142 (969)
+.|+.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .
T Consensus 88 ~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 167 (768)
T 3rgz_A 88 HINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGAN 167 (768)
T ss_dssp CEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEET
T ss_pred CcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcC
Confidence 5778888999999999999888887 88888888888888888777666543 3
Q ss_pred ------------------------------cCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCC
Q 002085 143 ------------------------------RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDL 192 (969)
Q Consensus 143 ------------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 192 (969)
.+++|++|+|++|++++.+|. ++++++|++|+|++|++++.+|..|+++
T Consensus 168 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 246 (768)
T 3rgz_A 168 VVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTC 246 (768)
T ss_dssp HHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTC
T ss_pred ChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcC
Confidence 334455555555555554554 6777777777777777777777777777
Q ss_pred CCcceeecccCCCCC--------------------CCCCCcccccc-CCCcEEEccCCcccccCchhhcCCCchhhhhcc
Q 002085 193 SNLEVLGLAYNSNFK--------------------PAMIPIEFGML-KKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251 (969)
Q Consensus 193 ~~L~~L~L~~N~~~~--------------------~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 251 (969)
++|++|++++|.+.. .+.+|..+..+ ++|++|+|++|++.+.+|..|+++++|++|+|+
T Consensus 247 ~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 326 (768)
T 3rgz_A 247 TELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326 (768)
T ss_dssp SSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECC
T ss_pred CCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECC
Confidence 777777777775321 01445555443 777777777777777777777777777777777
Q ss_pred CCcCCCCCCch-hhcCcccchhhccCcccccCCCCchhhc----------------------------ccccccccCccc
Q 002085 252 GNHLEGAIPSG-LFLLNNLTQLFLYDNILSGEIPSSVEAL----------------------------KLTDIDLSMNNL 302 (969)
Q Consensus 252 ~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~----------------------------~L~~L~Ls~N~l 302 (969)
+|+++|.+|.. +..+++|++|+|++|++++.+|..+... +|+.|++++|++
T Consensus 327 ~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l 406 (768)
T 3rgz_A 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406 (768)
T ss_dssp SSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEE
T ss_pred CCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcc
Confidence 77777666654 6667777777777777766666555432 355556666666
Q ss_pred cccCCccccCcccchhhhhccccCcCcCCcccccc------c-ccCcccccCCCCCCCCccCcEEEcccccccCCCCccc
Q 002085 303 TGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVV------A-FENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGL 375 (969)
Q Consensus 303 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~-~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 375 (969)
++.+|..|+.+++|+.|++++|++++.+|..++.+ . ..|++.+.+|..+..+++|++|++++|++++.+|..+
T Consensus 407 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 486 (768)
T 3rgz_A 407 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred ccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHH
Confidence 66677777777788888888888877777665532 2 2466777888888888888888888888888888888
Q ss_pred ccccCCCccccCCCccccccCccc--cccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccc--------
Q 002085 376 WTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVEL-------- 445 (969)
Q Consensus 376 ~~l~~L~~L~Ls~N~l~~~~~~~~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-------- 445 (969)
..+++|+.|+|++|++++.+|... .++|++|+|++|++++.+|..++.+++|++|++++|.++|.+|..+
T Consensus 487 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~ 566 (768)
T 3rgz_A 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBC
T ss_pred hcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhh
Confidence 888889999999999888888754 3689999999999998899999999999999999998887777544
Q ss_pred --------------------------------------------------------------cCccccchhhccCcccCC
Q 002085 446 --------------------------------------------------------------TSLSHLNTLLLDGNKLSG 463 (969)
Q Consensus 446 --------------------------------------------------------------~~l~~L~~L~Ls~N~l~~ 463 (969)
..+++|+.|||++|+++|
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g 646 (768)
T 3rgz_A 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646 (768)
T ss_dssp CSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBS
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccc
Confidence 335778999999999999
Q ss_pred CCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCCCCccccc
Q 002085 464 KLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNN 542 (969)
Q Consensus 464 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~ 542 (969)
.+|..++.+++|+.|+|++|+++|.+|..|+++++|+.||||+|+++|.+|..++.++ |++||||+|+|+|.||...+.
T Consensus 647 ~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~ 726 (768)
T 3rgz_A 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSG
T ss_pred cCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhh
Confidence 9999999999999999999999999999999999999999999999999999999996 999999999999999987655
Q ss_pred cccc-ccccCCCCCCCCCCCCCCCCCCCC
Q 002085 543 LAYD-DSFLNNSNLCVKNPIINLPKCPSR 570 (969)
Q Consensus 543 ~~~~-~~~~~n~~l~~~~~~~~l~~c~~~ 570 (969)
.++. .+|.+|+++||.+ ++.|...
T Consensus 727 ~~~~~~~~~gN~~Lcg~~----l~~C~~~ 751 (768)
T 3rgz_A 727 ETFPPAKFLNNPGLCGYP----LPRCDPS 751 (768)
T ss_dssp GGSCGGGGCSCTEEESTT----SCCCCSC
T ss_pred ccCCHHHhcCCchhcCCC----CcCCCCC
Confidence 5543 5799999999963 3467543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2e-57 Score=561.16 Aligned_cols=457 Identities=34% Similarity=0.575 Sum_probs=392.8
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|++++|.+.+.+|. ++++++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|.. .+++|++|+|
T Consensus 200 ~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L 276 (768)
T 3rgz_A 200 VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSL 276 (768)
T ss_dssp TTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEEC
T ss_pred CcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEEC
Confidence 4678888888888887776 888888888888888888888888888888888888888888777765 7888888888
Q ss_pred CCCCCCCcCCCcccCc-ccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCcc-ccccCCCcEEEccCCc
Q 002085 153 GGNNFSGDIPRSIGRL-SELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLKKLKTLWMTEAN 230 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~-~~~l~~L~~L~L~~n~ 230 (969)
++|++++.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|++++|.+ .+.+|.. ++.+++|++|++++|+
T Consensus 277 ~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l--~~~ip~~~l~~l~~L~~L~Ls~n~ 354 (768)
T 3rgz_A 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF--SGELPMDTLLKMRGLKVLDLSFNE 354 (768)
T ss_dssp CSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEE--EEECCHHHHTTCTTCCEEECCSSE
T ss_pred cCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcc--cCcCCHHHHhcCCCCCEEeCcCCc
Confidence 8888888888888765 8888888888888888888888888888888888863 2356655 8888888888888888
Q ss_pred ccccCchhhcCCC-chhhhhccCCcCCCCCCchhhc--CcccchhhccCcccccCCCCchhhc-ccccccccCccccccC
Q 002085 231 LIGEIPEAMSNLS-SLEILALNGNHLEGAIPSGLFL--LNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSI 306 (969)
Q Consensus 231 l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~ 306 (969)
+.+.+|..+.+++ +|++|+|++|++++.+|..+.. +++|++|++++|++++.+|..+... +|+.|++++|++++.+
T Consensus 355 l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 434 (768)
T 3rgz_A 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434 (768)
T ss_dssp EEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCC
T ss_pred cCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcc
Confidence 8888888888877 8888888888888888877776 7889999999999998888888776 6999999999999999
Q ss_pred CccccCcccchhhhhccccCcCcCCcccccc------c-ccCcccccCCCCCCCCccCcEEEcccccccCCCCccccccc
Q 002085 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGVV------A-FENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF 379 (969)
Q Consensus 307 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~-~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 379 (969)
|..|+.+++|+.|++++|++++.+|..+..+ . ..|++.+.+|..+.++++|++|+|++|++++.+|.++..++
T Consensus 435 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 514 (768)
T 3rgz_A 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred cHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCC
Confidence 9999999999999999999999888876532 2 25678888999999999999999999999999999999999
Q ss_pred CCCccccCCCccccccCcccc--ccccEEEeeccccCCCccccc------------------------------------
Q 002085 380 NLSSLMLSDNTISGELPSKTA--WNLTRLEISNNRFSGQIQRGV------------------------------------ 421 (969)
Q Consensus 380 ~L~~L~Ls~N~l~~~~~~~~~--~~L~~L~Ls~N~l~~~~~~~~------------------------------------ 421 (969)
+|+.|+|++|++++.+|.... ++|+.|+|++|+++|.+|..+
T Consensus 515 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594 (768)
T ss_dssp TCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEE
T ss_pred CCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccc
Confidence 999999999999998887543 689999999999987777543
Q ss_pred ----------------------------------CCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCc
Q 002085 422 ----------------------------------GSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPS 467 (969)
Q Consensus 422 ----------------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 467 (969)
+.+++|+.|++++|+++|.+|.+|+++++|+.|+|++|+++|.+|.
T Consensus 595 ~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~ 674 (768)
T 3rgz_A 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674 (768)
T ss_dssp ECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred ccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCCh
Confidence 3457789999999999999999999999999999999999999999
Q ss_pred ccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCccccc-cccEEEeecCc-CCCC
Q 002085 468 QIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNK-LYGN 535 (969)
Q Consensus 468 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~-l~~~ 535 (969)
.++++++|+.|||++|+++|.+|..++++++|++||||+|+|+|.||.. +++ .+....+.+|+ |+|.
T Consensus 675 ~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 9999999999999999999999999999999999999999999999975 333 35555677775 6663
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.6e-58 Score=553.02 Aligned_cols=470 Identities=19% Similarity=0.299 Sum_probs=395.2
Q ss_pred CHHHHHHHHHHHHHcCCCCC---------CCCCCCCCCCCCC---CcceeeC-CCeEEEEecCCCCCCCCCccccCCCcc
Q 002085 33 NTEERTILLNLKQQLGNPPS---------LQSWTSTSSPCDW---PEITCTF-NSVTGISLRHKDITQKIPPIICDLKNL 99 (969)
Q Consensus 33 ~~~~~~all~~k~~~~~~~~---------l~sw~~~~~~c~w---~gv~C~~-~~v~~l~l~~~~l~~~~~~~~~~l~~L 99 (969)
...|++||.+||+++.++.+ ..+|+.++|||.| .||+|+. ++|+.|+|+++++.|.+|+++++|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 45699999999999976643 2379999999999 9999965 689999999999999999999999999
Q ss_pred cEEEccCCCC------CC------CCCcccCCCCCCCEEeccCCcCCCCCCCCcccC-------------------CCCc
Q 002085 100 TTIDLSSNSI------PG------EFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRI-------------------SGLQ 148 (969)
Q Consensus 100 ~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-------------------~~L~ 148 (969)
++|||++|.+ .| .+|... +..|+ +++++|.+.+.+|..+..+ ..++
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred eEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 9999999976 23 344433 55677 8888888887777666521 1222
Q ss_pred EEecC--CCCCCCcCCCcccCcccccceecccccccCc-----------------CCcccC--CCCCcceeecccCCCCC
Q 002085 149 CIDLG--GNNFSGDIPRSIGRLSELQTLYLYMNEFNGT-----------------FPKEIG--DLSNLEVLGLAYNSNFK 207 (969)
Q Consensus 149 ~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~~~~ 207 (969)
.+.+. .|++++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++|+ .
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~--l 261 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP--N 261 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT--T
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc--C
Confidence 22232 678887 898999999999999999999985 899988 99999999999987 4
Q ss_pred CCCCCccccccCCCcEEEccCCc-ccc-cCchhhcCC------CchhhhhccCCcCCCCCCc--hhhcCcccchhhccCc
Q 002085 208 PAMIPIEFGMLKKLKTLWMTEAN-LIG-EIPEAMSNL------SSLEILALNGNHLEGAIPS--GLFLLNNLTQLFLYDN 277 (969)
Q Consensus 208 ~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N 277 (969)
.+.+|..|+++++|++|++++|+ +.+ .+|..++++ ++|++|+|++|+++ .+|. .+..+++|++|+|++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 56788899999999999999998 888 889888876 89999999999999 7888 8999999999999999
Q ss_pred ccccCCCCchhhc-ccccccccCccccccCCccccCccc-chhhhhccccCcCcCCcccccccccCcccccCCCCCCCC-
Q 002085 278 ILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKN-LQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNC- 354 (969)
Q Consensus 278 ~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l- 354 (969)
+++|.+| .+..+ +|+.|++++|+++ .+|..+..+++ |+.|++++|+++ .+ |..+..+
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l-----------------p~~~~~~~ 400 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI-----------------PNIFDAKS 400 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC-----------------CSCCCTTC
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc-----------------chhhhhcc
Confidence 9998888 66554 7999999999999 78888999999 999999999988 33 4444444
Q ss_pred -ccCcEEEcccccccCCCCcccc-------cccCCCccccCCCccccccCccc---cccccEEEeeccccCCCcccccCC
Q 002085 355 -RTLRTVQLYSNRFSGELPTGLW-------TTFNLSSLMLSDNTISGELPSKT---AWNLTRLEISNNRFSGQIQRGVGS 423 (969)
Q Consensus 355 -~~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~---~~~L~~L~Ls~N~l~~~~~~~~~~ 423 (969)
++|+.|++++|++++.+|..+. .+.+|+.|+|++|+++ .+|... .++|++|+|++|+++...+..+..
T Consensus 401 l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 479 (636)
T 4eco_A 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKD 479 (636)
T ss_dssp SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEE
T ss_pred cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhcc
Confidence 4899999999999999998888 7789999999999998 455432 468999999999999444444433
Q ss_pred c-------ccchhhcccCCccccccCcccc--CccccchhhccCcccCCCCCcccccccCCCEEEc------cCccccCC
Q 002085 424 W-------KNLIVFKASNNLFSGEIPVELT--SLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL------ARNELSGE 488 (969)
Q Consensus 424 l-------~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~ 488 (969)
. ++|++|++++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.
T Consensus 480 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~ 557 (636)
T 4eco_A 480 ENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLRE 557 (636)
T ss_dssp TTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCC
T ss_pred ccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCccccc
Confidence 3 39999999999999 7888887 99999999999999997 8999999999999999 56889999
Q ss_pred CCcccccccccceEeccCccccccCCCccccccccEEEeecCcCCC
Q 002085 489 IPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYG 534 (969)
Q Consensus 489 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~~ 534 (969)
+|..++++++|+.|||++|+| +.+|..+. -.|++|||++|++..
T Consensus 558 ~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 558 WPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCE
T ss_pred ChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCcc
Confidence 999999999999999999999 68998876 359999999998863
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-56 Score=546.38 Aligned_cols=455 Identities=20% Similarity=0.280 Sum_probs=266.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCCCCCCCCC-----CC--CCC------------CcceeeC-CCeEEEEecCCCCCCCCC
Q 002085 31 SPNTEERTILLNLKQQLGNPPSLQSWTSTS-----SP--CDW------------PEITCTF-NSVTGISLRHKDITQKIP 90 (969)
Q Consensus 31 ~~~~~~~~all~~k~~~~~~~~l~sw~~~~-----~~--c~w------------~gv~C~~-~~v~~l~l~~~~l~~~~~ 90 (969)
.+..+|++||++||+++.++ +|+.+. +| |.| .||+|+. ++|+.|+|+++++.|.+|
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred ccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 34567999999999999766 776443 66 999 9999984 789999999999999999
Q ss_pred ccccCCCcccEEEc-cCCCCCCCCCccc---------------------------------------------------C
Q 002085 91 PIICDLKNLTTIDL-SSNSIPGEFPEFL---------------------------------------------------Y 118 (969)
Q Consensus 91 ~~~~~l~~L~~L~L-~~n~l~~~~p~~~---------------------------------------------------~ 118 (969)
++|++|++|++||| ++|.++|..|-.. .
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 8888876643221 1
Q ss_pred CCCCCCEEeccC--CcCCCCCCCCcccCCCCcEEecCCCCCCC-----------------cCCCccc--Ccccccceecc
Q 002085 119 NCTKLQNLDLSQ--NYFVGPIPSDIDRISGLQCIDLGGNNFSG-----------------DIPRSIG--RLSELQTLYLY 177 (969)
Q Consensus 119 ~l~~L~~L~Ls~--N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~ 177 (969)
....++.+.++. |++++ +|..|+++++|++|+|++|+|++ .+|..++ ++++|++|+|+
T Consensus 421 ~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred cccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 112223333332 55555 56666666666666666666665 2555544 55555555555
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCC-CCCccccccC-------CCcEEEccCCcccccCch--hhcCCCchhh
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPA-MIPIEFGMLK-------KLKTLWMTEANLIGEIPE--AMSNLSSLEI 247 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~-~~p~~~~~l~-------~L~~L~L~~n~l~~~~p~--~~~~l~~L~~ 247 (969)
+|++.+.+|..|+++++|++|+|++|+.. .+ .+|..++.++ +|+.|+|++|++. .+|. .|+++++|+.
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~l-sg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGI-SAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTS-CHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCc-ccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 55555555555555555555555555310 11 2444444333 5555555555554 4444 4555555555
Q ss_pred hhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-c-cccccccCccccccCCccccCccc--chhhhhcc
Q 002085 248 LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-K-LTDIDLSMNNLTGSIPEEFGKLKN--LQLLGLFS 323 (969)
Q Consensus 248 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~ 323 (969)
|+|++|+++ .+| .+..+++|+.|+|++|+++ .+|..+..+ + |+.|+|++|+++ .+|..+..++. |+.|+|++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 555555555 444 4445555555555555555 344333333 3 555555555555 44444444332 55555555
Q ss_pred ccCcCcCCcccccccccCcccccCCCCCC--CCccCcEEEcccccccCCCCcccc-cccCCCccccCCCccccccCcccc
Q 002085 324 NHLSGEVPASIGVVAFENNLSGAVPKSLG--NCRTLRTVQLYSNRFSGELPTGLW-TTFNLSSLMLSDNTISGELPSKTA 400 (969)
Q Consensus 324 N~l~~~~p~~~~~l~~~n~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~ 400 (969)
|++++.+|. +|..+. .+++|+.|+|++|+++ .+|..+. .+++
T Consensus 654 N~l~g~ip~--------------l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~-------------------- 698 (876)
T 4ecn_A 654 NKIGSEGRN--------------ISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSP-------------------- 698 (876)
T ss_dssp SCTTTTSSS--------------CSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCC--------------------
T ss_pred CcCCCcccc--------------chhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCC--------------------
Confidence 555443331 111111 2234455555555554 3333332 3444
Q ss_pred ccccEEEeeccccCCCcccccC-------CcccchhhcccCCccccccCcccc--CccccchhhccCcccCCCCCccccc
Q 002085 401 WNLTRLEISNNRFSGQIQRGVG-------SWKNLIVFKASNNLFSGEIPVELT--SLSHLNTLLLDGNKLSGKLPSQIVS 471 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~-------~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~ 471 (969)
|+.|+|++|+|+...+..+. ++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..
T Consensus 699 --L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~ 774 (876)
T 4ecn_A 699 --ISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLN 774 (876)
T ss_dssp --CSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred --CCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhc
Confidence 55555555555522222221 2236666666666666 5666665 66667777777777664 5666666
Q ss_pred ccCCCEEEccC------ccccCCCCcccccccccceEeccCccccccCCCccccccccEEEeecCcCCCCCC
Q 002085 472 WTSLNNLNLAR------NELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIP 537 (969)
Q Consensus 472 l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~~~~p 537 (969)
+++|+.|+|++ |++.+.+|..|+++++|+.|+|++|+| +.+|..+.. .|+.|||++|++...-+
T Consensus 775 L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 775 SSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTP-QLYILDIADNPNISIDV 844 (876)
T ss_dssp CTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCS-SSCEEECCSCTTCEEEC
T ss_pred CCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcC-CCCEEECCCCCCCccCh
Confidence 66777776654 667777777777777777777777777 577776552 47777777777754333
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.1e-54 Score=460.83 Aligned_cols=277 Identities=17% Similarity=0.240 Sum_probs=234.2
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999999999999999997654434444578999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
|||+||+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 112 Ey~~gG~L~~~i~~~~-------------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~D 175 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-------------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITD 175 (311)
T ss_dssp CCCTTEEHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred ecCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEE
Confidence 9999999999998654 389999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 875 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 875 (969)
||+|+.+............+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+...+...+.. ..-.
T Consensus 176 FGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~~~ 252 (311)
T 4aw0_A 176 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK---LEYD 252 (311)
T ss_dssp CTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCC
T ss_pred cCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CCCC
Confidence 9999987654444455567899999999999999999999999999999999999999987765544443322 1111
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCCCCcccccCCCCCCCCCcccceeccc
Q 002085 876 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLGTAGYLFGFK 955 (969)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (969)
.+...+.++.+++.+|++.||++|||++|++.. ..+..||||+ +++|+..
T Consensus 253 ------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~----------------~~i~~Hp~F~--~idw~~l 302 (311)
T 4aw0_A 253 ------------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY----------------GPLKAHPFFE--SVTWENL 302 (311)
T ss_dssp ------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH----------------HHHHTSGGGT--TCCCTTG
T ss_pred ------------CCcccCHHHHHHHHHHccCCHhHCcChHHHcCC----------------HHHHCCCCcC--CCCHHHh
Confidence 112234678899999999999999999886432 2346799999 6677777
Q ss_pred cccchh
Q 002085 956 RSKKVA 961 (969)
Q Consensus 956 ~~~~~~ 961 (969)
+++++|
T Consensus 303 ~~~~pP 308 (311)
T 4aw0_A 303 HQQTPP 308 (311)
T ss_dssp GGSCCC
T ss_pred cCCCCC
Confidence 766654
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-52 Score=504.88 Aligned_cols=450 Identities=21% Similarity=0.188 Sum_probs=312.9
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
..++.|+++++.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 35889999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred CCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCc--EEEccCCc
Q 002085 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLK--TLWMTEAN 230 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~--~L~L~~n~ 230 (969)
++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|++++|.+ ....|..|+.+++|+ .|++++|.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l--~~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI--HYLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC--CEECHHHHHTTTTCCSEEEECTTCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc--cccChhhhhhhcccceeEEecCCCc
Confidence 99999977788899999999999999999975545555699999999999963 345577789999999 89999999
Q ss_pred ccccCchhhcCC---------------------------------------------------CchhhhhccCCcCCCCC
Q 002085 231 LIGEIPEAMSNL---------------------------------------------------SSLEILALNGNHLEGAI 259 (969)
Q Consensus 231 l~~~~p~~~~~l---------------------------------------------------~~L~~L~L~~N~l~~~~ 259 (969)
+.+..|..|... .+|+.|++++|.+++..
T Consensus 191 l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~ 270 (606)
T 3t6q_A 191 IAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270 (606)
T ss_dssp CCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCC
T ss_pred cCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccC
Confidence 988877765432 04555666666666555
Q ss_pred CchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCccccccc
Q 002085 260 PSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVA 338 (969)
Q Consensus 260 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 338 (969)
+..|..+++|++|++++|+++ .+|..+..+ +|++|++++|++++..|..+..+++|++|++++|.+.+.+|.
T Consensus 271 ~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~------ 343 (606)
T 3t6q_A 271 SNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT------ 343 (606)
T ss_dssp TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS------
T ss_pred HHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch------
Confidence 555666666666666666666 344444433 566666666666655556666666666666666666544432
Q ss_pred ccCcccccCCCCCCCCccCcEEEcccccccCCC--CcccccccCCCccccCCCccccccCccc--cccccEEEeeccccC
Q 002085 339 FENNLSGAVPKSLGNCRTLRTVQLYSNRFSGEL--PTGLWTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFS 414 (969)
Q Consensus 339 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~~L~~L~Ls~N~l~ 414 (969)
..+.++++|++|++++|++++.. |..+..+++|+.|++++|.+++..|... .++|++|++++|+++
T Consensus 344 ----------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 344 ----------GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp ----------STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred ----------hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 23556666666666666665443 5556666666666666666665544432 245666666666666
Q ss_pred CCcccc-cCCcccchhhcccCCccccccCccccCccccchhhccCcccCCC---CCcccccccCCCEEEccCccccCCCC
Q 002085 415 GQIQRG-VGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGK---LPSQIVSWTSLNNLNLARNELSGEIP 490 (969)
Q Consensus 415 ~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p 490 (969)
+..+.. +..+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|+|++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 554433 56666666666666666666666666666666666666666541 22445666666666666666666556
Q ss_pred cccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCCCCccccc
Q 002085 491 KAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNN 542 (969)
Q Consensus 491 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~ 542 (969)
..|+++++|+.|||++|++++.+|..+..++ | +|++++|++++.+|..+..
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~ 545 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPI 545 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHH
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhccc
Confidence 6666666666666666666666666666664 5 6666666666555554443
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=513.67 Aligned_cols=472 Identities=21% Similarity=0.229 Sum_probs=340.1
Q ss_pred CCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCC-CcccCCCCCCCEEeccCCcCCCCCCCCc
Q 002085 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEF-PEFLYNCTKLQNLDLSQNYFVGPIPSDI 141 (969)
Q Consensus 63 c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 141 (969)
|.|..|.+-..+++.|+|++|.+++..|..|.++++|++|||++|.+.+.+ |..|.++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 567888774478999999999999988999999999999999999776666 7889999999999999999998889999
Q ss_pred ccCCCCcEEecCCCCCCCcCCCc--ccCcccccceecccccccCcCC-cccCCCCCcceeecccCCCCCCCCCCcccccc
Q 002085 142 DRISGLQCIDLGGNNFSGDIPRS--IGRLSELQTLYLYMNEFNGTFP-KEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218 (969)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l 218 (969)
.++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+ ....|..++.+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i--~~~~~~~l~~l 171 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI--FLVCEHELEPL 171 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCC--CCCCSGGGHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcC--CeeCHHHcccc
Confidence 99999999999999999877665 8999999999999999987765 5799999999999999973 45577788887
Q ss_pred --CCCcEEEccCCcccccCchhhcCCCc------hhhhhccCCcCCCCCCchhhcC------------------------
Q 002085 219 --KKLKTLWMTEANLIGEIPEAMSNLSS------LEILALNGNHLEGAIPSGLFLL------------------------ 266 (969)
Q Consensus 219 --~~L~~L~L~~n~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~l~~l------------------------ 266 (969)
++|+.|++++|++.+..|..++.+++ |+.|+|++|++++..+..+...
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999988887777665 9999999998887776655432
Q ss_pred --------------cccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCC
Q 002085 267 --------------NNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVP 331 (969)
Q Consensus 267 --------------~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 331 (969)
++|+.|+|++|.+++..+..+..+ +|+.|+|++|++++..|..|..+++|++|+|++|++++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 467777777777776666666655 57777777777777777777777777777777777765544
Q ss_pred ccccc------ccc-cCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCcccccccc
Q 002085 332 ASIGV------VAF-ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLT 404 (969)
Q Consensus 332 ~~~~~------l~~-~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~ 404 (969)
..+.. +.+ .|++.+..+..+.++++|++|+|++|.+++ ++ .+++|+.|++++|+++ .+|.. ..+++
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~-~l~~~-~~~l~ 404 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLV-TLPKI-NLTAN 404 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCC-CCCCC-CTTCC
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCcc-ccccc-ccccc
Confidence 43321 222 233333334445556666666666666552 21 1445555555555554 22221 23455
Q ss_pred EEEeeccccCCCc-ccccCCcccchhhcccCCccccccCc-cccCccccchhhccCcccC-----CCCCcccccccCCCE
Q 002085 405 RLEISNNRFSGQI-QRGVGSWKNLIVFKASNNLFSGEIPV-ELTSLSHLNTLLLDGNKLS-----GKLPSQIVSWTSLNN 477 (969)
Q Consensus 405 ~L~Ls~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~ 477 (969)
.|++++|++++.. +..+.++++|++|++++|++++..+. .+..+++|+.|+|++|+++ +..|..+..+++|+.
T Consensus 405 ~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~ 484 (844)
T 3j0a_A 405 LIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQV 484 (844)
T ss_dssp EEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEEC
T ss_pred eeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccE
Confidence 5566666655432 12344667777777777777754333 3455677777777777776 334455667777777
Q ss_pred EEccCccccCCCCcccccccccceEeccCccccccCCCccccccccEEEeecCcCCCCCCccccccc
Q 002085 478 LNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 544 (969)
Q Consensus 478 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~~~~p~~~~~~~ 544 (969)
|+|++|+|++..|..|..+++|+.|||++|+|++..|..+. -.|+.|||++|+|++.+|..+..+.
T Consensus 485 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~~~L~ 550 (844)
T 3j0a_A 485 LYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVFVSLS 550 (844)
T ss_dssp CCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCCSSCC
T ss_pred EECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHhCCcC
Confidence 77777777776677777777777777777777754443333 3477777777777777776665443
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.3e-53 Score=455.58 Aligned_cols=270 Identities=24% Similarity=0.372 Sum_probs=218.0
Q ss_pred cCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 636 SSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
++|...+.||+|+||+||+|++. .+++.||||+++.. .....+.|.+|++++++++|||||+++++|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 46778899999999999999875 35788999999643 34556789999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.|||||||++|+|.++++..+..............++|..++.|+.|||.||+|||++ +|+||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 9999999999999999987542111111111234699999999999999999999988 9999999999999999999
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 869 (969)
+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....++...+...
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~ 246 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 246 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999987654433333445579999999999999999999999999999999999 89999876655444333221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ..+.+..++.++.+++.+||+.||++|||++||++.|+++.
T Consensus 247 ~--------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 247 R--------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp C--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C--------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 11223334578999999999999999999999999998764
No 9
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.9e-52 Score=451.82 Aligned_cols=271 Identities=24% Similarity=0.380 Sum_probs=220.0
Q ss_pred cCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 636 SSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
.+++..++||+|+||+||+|++. .+++.||||+++... .....+.|.+|++++++++|||||+++|+|.+++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 34566789999999999999874 356789999986543 23345789999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCC---CCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
.+||||||++|+|.++++........+. .......++|..+++|+.|||.||+|||+. +||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 9999999999999999976543211111 111234699999999999999999999988 9999999999999999
Q ss_pred CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHH
Q 002085 788 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 866 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~ 866 (969)
++.+||+|||+|+.+.........+...||++|||||++.++.|+.++|||||||++|||+| |..||.+....++...+
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i 260 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99999999999987755444444556789999999999999999999999999999999999 78898876654443333
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 867 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. +...+.+.+++..+.+++.+||+.||++||||+||++.|+...
T Consensus 261 ~~--------------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RN--------------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HT--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred Hc--------------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 21 1112233445578999999999999999999999999998763
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7e-52 Score=453.23 Aligned_cols=270 Identities=24% Similarity=0.371 Sum_probs=210.9
Q ss_pred cCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 636 SSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
++|...++||+|+||+||+|++. .+++.||||+++.. .....+.|.+|++++++++|||||+++++|.+++.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 35667789999999999999875 35789999999643 34556789999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccc--cCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLV--SGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~--~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
.|||||||++|+|.++++....... ..........++|.+++.|+.|||.||+|||+. +|+||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999987643211 111122235699999999999999999999988 99999999999999999
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 867 (969)
+.+||+|||+|+...........+...||+.|||||++.+..++.++|||||||++|||+| |+.||.+....+....+.
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 274 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999997655444444456789999999999999999999999999999999999 899998766544443332
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. . +.+.+..++.++.+++.+||+.||++||||+||+++|+.+.
T Consensus 275 ~g----~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 275 QG----R----------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HT----C----------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred cC----C----------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 21 1 11223334578999999999999999999999999998875
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.7e-51 Score=491.62 Aligned_cols=463 Identities=20% Similarity=0.160 Sum_probs=389.5
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.+++++.+++ .+|..+. +.+++|||++|.|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 3455555554 3555554 378999999999998889999999999999999999999899999999999999999999
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCc
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP 236 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 236 (969)
+++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|++. ...+..+..+++|++|++++|++.+..|
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS--SIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCC--CCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccc--ccCcccccCCcccCEEEcccCcccccCh
Confidence 99889999999999999999999999887889999999999999999743 2222344559999999999999999999
Q ss_pred hhhcCCCchh--hhhccCCcCCCCCCchhhcCcccchhhccCcccc--------------------------cCCCCchh
Q 002085 237 EAMSNLSSLE--ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS--------------------------GEIPSSVE 288 (969)
Q Consensus 237 ~~~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--------------------------~~~~~~~~ 288 (969)
..|+.+++|+ .|++++|++++..|..+. ..+|+.|++++|... ...+..+.
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 9999999999 899999999987666544 457777777766410 01111222
Q ss_pred ---hcccccccccCccccccCCccccCcccchhhhhccccCcCcCCccccc------ccc-cCcccccCCCCCCCCccCc
Q 002085 289 ---ALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGV------VAF-ENNLSGAVPKSLGNCRTLR 358 (969)
Q Consensus 289 ---~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~-~n~l~~~~p~~l~~l~~L~ 358 (969)
..+++.|++++|.+++..+..|..+++|++|++++|+++ .+|..+.. +.+ .|.+.+..|..+.++++|+
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 328 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCS
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCC
Confidence 225778888888888777777888888888888888887 56655432 233 3455666677899999999
Q ss_pred EEEcccccccCCCCcc-cccccCCCccccCCCcccccc--Cc--cccccccEEEeeccccCCCcccccCCcccchhhccc
Q 002085 359 TVQLYSNRFSGELPTG-LWTTFNLSSLMLSDNTISGEL--PS--KTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKAS 433 (969)
Q Consensus 359 ~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~--~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 433 (969)
+|++++|.+.+.+|.. +..+++|+.|++++|.+++.. +. ...++|++|++++|++++..|..+..+++|++|+++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred EEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 9999999999777665 889999999999999998765 33 334789999999999999999999999999999999
Q ss_pred CCccccccCcc-ccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCC---CCcccccccccceEeccCccc
Q 002085 434 NNLFSGEIPVE-LTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGE---IPKAIGSLLVMVSLDLSGNQF 509 (969)
Q Consensus 434 ~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~ls~N~l 509 (969)
+|.+++..|.. +..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++. .+..+..+++|+.|+|++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 99999876654 89999999999999999999999999999999999999999873 346799999999999999999
Q ss_pred cccCCCcccccc-ccEEEeecCcCCCCCCccccccccc
Q 002085 510 SGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNLAYD 546 (969)
Q Consensus 510 ~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~ 546 (969)
++..|..++.++ |++|+|++|++++.+|..+..+...
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 998899999995 9999999999999999888776644
No 12
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-50 Score=496.14 Aligned_cols=467 Identities=21% Similarity=0.195 Sum_probs=310.1
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|+++++.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 36889999999998877778999999999999999999888888999999999999999998655567899999999999
Q ss_pred CCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCcccc--ccCCCcEEEccCCc
Q 002085 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFG--MLKKLKTLWMTEAN 230 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~--~l~~L~~L~L~~n~ 230 (969)
++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+. ...+..++ .+++|++|++++|+
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ--ALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC--CBCHHHHGGGTTCEESEEECTTCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc--ccCHHHhhccccccccEEECCCCc
Confidence 999998777788899999999999999998888888888999999999888632 23333332 34566666666666
Q ss_pred ccccCchhhc---------------------------------------------------CCCc--hhhhhccCCcCCC
Q 002085 231 LIGEIPEAMS---------------------------------------------------NLSS--LEILALNGNHLEG 257 (969)
Q Consensus 231 l~~~~p~~~~---------------------------------------------------~l~~--L~~L~L~~N~l~~ 257 (969)
+.+..|..|. +++. |+.|+|++|++++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 6555554443 3322 5555555555554
Q ss_pred CCCchhhcCcccchhhccCcccccCCCCchhhc----------------------------------ccccccccCcccc
Q 002085 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL----------------------------------KLTDIDLSMNNLT 303 (969)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~----------------------------------~L~~L~Ls~N~l~ 303 (969)
..|..+..+++|++|+|++|++++..|..+... +|+.|++++|+++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 444555555555555555555554443322211 2333333334444
Q ss_pred ccCCccccCcccchhhhhccccCcCcC-C---------cccccccc-cCcccccCCCCCCCCccCcEEEcccccccCCCC
Q 002085 304 GSIPEEFGKLKNLQLLGLFSNHLSGEV-P---------ASIGVVAF-ENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 372 (969)
Q Consensus 304 ~~~p~~~~~l~~L~~L~L~~N~l~~~~-p---------~~~~~l~~-~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 372 (969)
+..+..|..+++|++|++++|.+.+.. + ..+..+.+ .|++.+..|..+..+++|+.|++++|++++.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 333333444444444444444332110 0 01111111 244555556666666666666666666665444
Q ss_pred -cccccccCCCccccCCCccccccCccc--cccccEEEeeccccC--CCcccccCCcccchhhcccCCccccccCccccC
Q 002085 373 -TGLWTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFS--GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTS 447 (969)
Q Consensus 373 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 447 (969)
..+..+++|+.|++++|++++..+... .++|+.|++++|.++ +.+|..+..+++|++|++++|+|++..+..|..
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 502 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG 502 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc
Confidence 456666666666666666665444332 356777777777665 456777778888888888888888777777788
Q ss_pred ccccchhhccCcccCCCCC--------cccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccc
Q 002085 448 LSHLNTLLLDGNKLSGKLP--------SQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQ 519 (969)
Q Consensus 448 l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 519 (969)
+++|++|+|++|++++..+ ..+..+++|+.|+|++|+|+...+..|.++++|+.|||++|+|++..+..+..
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 582 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNN 582 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCC
Confidence 8888888888888774321 23677788888888888887433346788888888888888888443344566
Q ss_pred cc-ccEEEeecCcCCCCCCcccc
Q 002085 520 LK-LNTFNLSSNKLYGNIPDEFN 541 (969)
Q Consensus 520 l~-L~~l~ls~N~l~~~~p~~~~ 541 (969)
+. |++|+|++|++++..|..+.
T Consensus 583 l~~L~~L~L~~N~l~~~~~~~~~ 605 (680)
T 1ziw_A 583 QVSLKSLNLQKNLITSVEKKVFG 605 (680)
T ss_dssp CTTCCEEECTTSCCCBCCHHHHH
T ss_pred CCCCCEEECCCCcCCccChhHhc
Confidence 64 88888888888876665443
No 13
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-51 Score=442.58 Aligned_cols=261 Identities=28% Similarity=0.383 Sum_probs=205.8
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++++..++||+|+||+||+|++. ..||||+++... ......+.|.+|++++++++|||||++++++.+ +..||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 56788899999999999999874 259999986433 344556889999999999999999999998865 5689999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
|||+||+|.++++... ..++|..+..|+.|||.||+|||+. +||||||||+|||+++++.+||+|
T Consensus 111 Ey~~gGsL~~~l~~~~------------~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~D 175 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE------------TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGD 175 (307)
T ss_dssp ECCSSCBHHHHHHTSC------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECC
T ss_pred EcCCCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEee
Confidence 9999999999997653 2489999999999999999999988 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT---TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
||+|+...............||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+.......... ...
T Consensus 176 FGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~---~~~ 252 (307)
T 3omv_A 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGR 252 (307)
T ss_dssp CSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHT
T ss_pred ccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH---Hhc
Confidence 999987654444444556789999999999864 46899999999999999999999999865543322221 111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
... .+. ....+..++..+.+++.+||+.||++||||+||++.|+.+.
T Consensus 253 ~~~-----~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 253 GYA-----SPD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp TCC-----CCC-STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCC-----CCC-cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 110 000 01122334578899999999999999999999999887763
No 14
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-50 Score=490.03 Aligned_cols=461 Identities=20% Similarity=0.175 Sum_probs=365.2
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|+++++.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 35888899998888887888888999999999999888777888888999999999999888877888888999999999
Q ss_pred CCCCCCCcCCCcccCcccccceecccccccC-cCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCc----EEEcc
Q 002085 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNG-TFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLK----TLWMT 227 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~----~L~L~ 227 (969)
++|.+++..|..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++ ....|..|+.+++|+ .|+++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l--~~~~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYI--QTITVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCC--CEECTTTTHHHHHCTTCCCEEECT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcc--eecChhhhhhhhccccccceeecc
Confidence 9998887777788888999999999998876 5688888899999999988863 344566677776665 78888
Q ss_pred CCcccccCchhhcCCCchhhhhccCCcCC-CCCCchhhcCcccchhhc--------------------------------
Q 002085 228 EANLIGEIPEAMSNLSSLEILALNGNHLE-GAIPSGLFLLNNLTQLFL-------------------------------- 274 (969)
Q Consensus 228 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L-------------------------------- 274 (969)
+|++.+..+..+... +|+.|++++|.++ +..|..+..+++|+.+++
T Consensus 190 ~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred CCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 888887766666655 8888888888876 234445555555554444
Q ss_pred -cCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcc----cccccccCc-ccccC
Q 002085 275 -YDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPAS----IGVVAFENN-LSGAV 347 (969)
Q Consensus 275 -~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~~n~-l~~~~ 347 (969)
..|.+++.+|. +... +|+.|++++|.+. .+| .+..+++|+.|++++|.+ +.+|.. +..+.+.++ ..+.+
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEEC
T ss_pred cccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccch
Confidence 55566666666 3333 6888888888886 455 778888888888888888 567732 122233333 44433
Q ss_pred CCCCCCCccCcEEEcccccccCC--CCcccccccCCCccccCCCccccccCc-cccccccEEEeeccccCCCcc-cccCC
Q 002085 348 PKSLGNCRTLRTVQLYSNRFSGE--LPTGLWTTFNLSSLMLSDNTISGELPS-KTAWNLTRLEISNNRFSGQIQ-RGVGS 423 (969)
Q Consensus 348 p~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~L~~L~Ls~N~l~~~~~-~~~~~ 423 (969)
.+..+++|++|++++|++++. +|..+..+++|+.|++++|.+++.... ...++|+.|++++|++++..+ ..+..
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 422 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLS 422 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhc
Confidence 567888999999999998865 488888889999999999998864322 233689999999999998877 68888
Q ss_pred cccchhhcccCCccccccCccccCccccchhhccCcccCC-CCCcccccccCCCEEEccCccccCCCCcccccccccceE
Q 002085 424 WKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSG-KLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSL 502 (969)
Q Consensus 424 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 502 (969)
+++|++|++++|.+++..|..+..+++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++..|..|+++++|+.|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 9999999999999998888889999999999999999987 478888899999999999999998888889999999999
Q ss_pred eccCccccccCCCcccccc-ccEEEeecCcCCCCCCcccccc
Q 002085 503 DLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNL 543 (969)
Q Consensus 503 ~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~ 543 (969)
+|++|++++.+|..++.++ |++|+|++|+++ .+|..+..+
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l 543 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHF 543 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGS
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhh
Confidence 9999999988888888885 999999999988 677666554
No 15
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-50 Score=440.36 Aligned_cols=267 Identities=23% Similarity=0.241 Sum_probs=218.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.+.|+..++||+|+||+||+|++..+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3567788899999999999999999999999999965422 24699999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC-cEEE
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-KAKI 793 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl 793 (969)
||||+||+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.+| .+||
T Consensus 129 mEy~~gg~L~~~l~~~~-------------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl 192 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMG-------------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAAL 192 (336)
T ss_dssp ECCCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEE
T ss_pred EeccCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEE
Confidence 99999999999998654 389999999999999999999988 999999999999999998 6999
Q ss_pred eecccceecccCCCCc---cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 794 ADFGLAKMLAKQGEPH---TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
+|||+|+.+...+... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.....+...+...
T Consensus 193 ~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~- 271 (336)
T 4g3f_A 193 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE- 271 (336)
T ss_dssp CCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS-
T ss_pred eeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC-
Confidence 9999999875433222 223457999999999999999999999999999999999999999887666555443221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCCCCcccccCCCCCCCCC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENYGGKKMGRDVDSAPLLG 946 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (969)
..+.. ..+...+..+.+++.+||+.||++|||+.|+++.|.++.. ......||+++
T Consensus 272 --~~~~~---------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~---------~~~~l~hPw~~ 327 (336)
T 4g3f_A 272 --PPPIR---------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ---------EVGGLKSPWKG 327 (336)
T ss_dssp --CCGGG---------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH---------HTTSSCSCSSS
T ss_pred --CCCch---------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh---------hhhhccCCCcC
Confidence 11111 1122334678999999999999999999999999887752 22345677765
No 16
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.4e-51 Score=446.99 Aligned_cols=254 Identities=26% Similarity=0.348 Sum_probs=210.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
+++|++.+.||+|+||+||+|++..+|+.||||++..... .....+.+.+|++++++++|||||++++++.+++..|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4689999999999999999999999999999999976543 344567899999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
||||+||+|.+++...+. ..+++..++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+
T Consensus 102 mEy~~gg~L~~~i~~~~~-----------~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~ 167 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKG-----------VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLG 167 (350)
T ss_dssp EECCTTCBHHHHHHHTTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEEC
T ss_pred EeCCCCCcHHHHHHHcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEc
Confidence 999999999999976542 3478889999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+|+.+... .......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+...+...+.. ...
T Consensus 168 DFGla~~~~~~--~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~---~~~ 242 (350)
T 4b9d_A 168 DFGIARVLNST--VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS---GSF 242 (350)
T ss_dssp STTEESCCCHH--HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TCC
T ss_pred ccccceeecCC--cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CCC
Confidence 99999876321 1123456799999999999999999999999999999999999999987765444333322 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+.+...+.++.+++.+||+.||++|||++|+++
T Consensus 243 -----------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 -----------PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0112233467899999999999999999999986
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.9e-50 Score=438.91 Aligned_cols=250 Identities=21% Similarity=0.350 Sum_probs=212.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
+.|+..++||+|+||+||+|++..+|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 468888999999999999999999999999999965432 22356889999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
|||+||+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 151 Ey~~gg~L~~~l~~~--------------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 213 (346)
T 4fih_A 151 EFLEGGALTDIVTHT--------------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSD 213 (346)
T ss_dssp CCCTTEEHHHHHHHS--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred eCCCCCcHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEec
Confidence 999999999999753 389999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKP 875 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 875 (969)
||+|+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.........+......
T Consensus 214 FGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--- 288 (346)
T 4fih_A 214 FGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--- 288 (346)
T ss_dssp CTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC---
T ss_pred CcCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---
Confidence 99999775432 2334578999999999999999999999999999999999999999877654444333221110
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 876 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. .+.+...+.++.+++.+||+.||++|||++|+++
T Consensus 289 -------~--~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 289 -------R--LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -------C--CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -------C--CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1112234478899999999999999999999875
No 18
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-48 Score=475.95 Aligned_cols=453 Identities=22% Similarity=0.227 Sum_probs=368.6
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.+++++++++. +|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 8 ~~~cs~~~L~~-ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 8 VADCSHLKLTQ-VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EEECCSSCCSS-CCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eeECCCCCccc-cccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 45666666653 665554 789999999999998888889999999999999999999999999999999999999999
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCc
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP 236 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 236 (969)
+++..+..|+++++|++|+|++|++++..|..|+++++|++|++++|.+ ....|..++.+++|++|++++|++.+..+
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l--~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL--SSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCC--SCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred cCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcc--cccCchhhcccccCCEEEccCCcccccCH
Confidence 9966556799999999999999999988889999999999999999974 45567889999999999999999999888
Q ss_pred hhhc--CCCchhhhhccCCcCCCCCCchhhcC---------------------------cccchhhccCcccccCCCCch
Q 002085 237 EAMS--NLSSLEILALNGNHLEGAIPSGLFLL---------------------------NNLTQLFLYDNILSGEIPSSV 287 (969)
Q Consensus 237 ~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l---------------------------~~L~~L~L~~N~l~~~~~~~~ 287 (969)
..+. .+++|+.|++++|++++..|..+..+ ++|+.|++++|.+++..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 8765 56899999999999998888777654 457788888999998888888
Q ss_pred hhc---ccccccccCccccccCCccccCcccchhhhhccccCcCcCCccccc------ccccCcccc------cCCC---
Q 002085 288 EAL---KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGV------VAFENNLSG------AVPK--- 349 (969)
Q Consensus 288 ~~~---~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~~n~l~~------~~p~--- 349 (969)
... +|+.|++++|++++..|..|+.+++|++|++++|++.+..|..+.. +.+.++..+ .+|.
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 765 3999999999999998999999999999999999999887765543 333443332 3443
Q ss_pred -CCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCcccccc-Cccc-----cccccEEEeeccccCCCcccccC
Q 002085 350 -SLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGEL-PSKT-----AWNLTRLEISNNRFSGQIQRGVG 422 (969)
Q Consensus 350 -~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~-----~~~L~~L~Ls~N~l~~~~~~~~~ 422 (969)
.+..+++|++|++++|++++..|..|..+++|++|++++|.++... +... ..+|+.|++++|++++..|..+.
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~ 402 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS 402 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhh
Confidence 7888999999999999999988889999999999999999865322 2111 14788888888888888888888
Q ss_pred CcccchhhcccCCccccccC-ccccCccccchhhccCcccCCCCCcccccccCCCEEEccCcccc--CCCCccccccccc
Q 002085 423 SWKNLIVFKASNNLFSGEIP-VELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELS--GEIPKAIGSLLVM 499 (969)
Q Consensus 423 ~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L 499 (969)
.+++|++|++++|.+++.+| ..|..+++|++|+|++|++++..+..+..+++|+.|++++|.++ +.+|..|+++++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 88888888888888887665 67788888888888888887666666666777777777777665 4566667777777
Q ss_pred ceEeccCccccccCCCcccccc-ccEEEeecCcCCC
Q 002085 500 VSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYG 534 (969)
Q Consensus 500 ~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~ 534 (969)
+.|||++|++++..|..++.++ |++|++++|++++
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 518 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGG
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccc
Confidence 7777777777654445566663 6777777776654
No 19
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.7e-50 Score=424.43 Aligned_cols=251 Identities=24% Similarity=0.311 Sum_probs=197.3
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
.+.+|+..+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|++++++++|||||++++++.+++..|+
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 35789999999999999999999999999999999976554444556789999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+ +|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||
T Consensus 91 vmEy~-~g~L~~~l~~~~-------------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl 153 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD-------------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEECC-CEEHHHHHHHSC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEE
T ss_pred EEeCC-CCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEE
Confidence 99999 689999998654 389999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
+|||+|+..... .......||+.|||||++.+..+ +.++||||+||++|||++|+.||.+.+...+.+.+...
T Consensus 154 ~DFGla~~~~~~---~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--- 227 (275)
T 3hyh_A 154 ADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--- 227 (275)
T ss_dssp CCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT---
T ss_pred eecCCCeecCCC---CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC---
Confidence 999999876432 23345689999999999998876 57999999999999999999999876544433332211
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..+ .+...+.++.+++.+||+.||++|||++|+++
T Consensus 228 ~~~------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 228 VYT------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCC------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCC------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 11123467889999999999999999999986
No 20
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-49 Score=424.10 Aligned_cols=249 Identities=26% Similarity=0.352 Sum_probs=201.2
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc----CCceEEE
Q 002085 639 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----ENSKLLV 714 (969)
Q Consensus 639 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 714 (969)
+..++||+|+||+||+|.+..+++.||+|++..... .....+.|.+|++++++++|||||++++++.+ ++..|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 556789999999999999999999999999965433 34456789999999999999999999999865 3457999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC-CCcEEE
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKI 793 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl 793 (969)
||||+||+|.+++.... .+++..+..++.||+.||+|||++ .++|+||||||+|||++. ++.+||
T Consensus 108 mEy~~gg~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl 173 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK-------------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKI 173 (290)
T ss_dssp EECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEE
T ss_pred EeCCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEE
Confidence 99999999999998654 389999999999999999999987 223999999999999985 789999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+|+... ........||+.|||||++.+ .|+.++|||||||++|||+||+.||.+..... .+.......
T Consensus 174 ~DFGla~~~~----~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~---~~~~~i~~~ 245 (290)
T 3fpq_A 174 GDLGLATLKR----ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA---QIYRRVTSG 245 (290)
T ss_dssp CCTTGGGGCC----TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---HHHHHHTTT
T ss_pred EeCcCCEeCC----CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH---HHHHHHHcC
Confidence 9999998542 223345689999999998865 69999999999999999999999997644321 111222221
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
... . ..+...+.++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~-~--------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 246 VKP-A--------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCC-G--------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC-C--------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 110 0 111112356889999999999999999999875
No 21
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-49 Score=438.29 Aligned_cols=273 Identities=24% Similarity=0.361 Sum_probs=218.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCC-----CcEEEEEEEeccchhcHHHHHHHHHHHHHHhcccc-CceeeEEEEEEcC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGA-----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH-ANIVKLWCCISSE 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~ 708 (969)
.++|+..+.||+|+||+||+|++... ++.||||+++... .....+.|.+|++++.+++| ||||+++++|.++
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 35788899999999999999998643 3689999996543 23445789999999999965 8999999999764
Q ss_pred -CceEEEEeeccCCCHHHHhccCcCcccc---CCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 709 -NSKLLVYEYMENQSLDRWLHGRKRSLVS---GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 709 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
+..|||||||++|+|.++++........ .........++|..+..++.|||.||+|||++ +||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcccee
Confidence 5689999999999999999875432111 11122345689999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchH
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLA 863 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~ 863 (969)
+++++.+||+|||+|+.+.........+...||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.......
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~ 297 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999997765544445556789999999999999999999999999999999998 89998765433221
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
......+ .+.+.+...+.++++++.+||+.||++||||+||++.|+.+.
T Consensus 298 ---~~~i~~g----------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 298 ---CRRLKEG----------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp ---HHHHHHT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHcC----------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1111111 111223334578999999999999999999999999998764
No 22
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.2e-50 Score=432.31 Aligned_cols=246 Identities=23% Similarity=0.272 Sum_probs=199.4
Q ss_pred cCCCccceeeecCcEEEEEEEEc---CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
++|++.+.||+|+||+||+|+.. .+++.||||+++....... ....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 57999999999999999999874 3578999999965432221 1246888999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+|||||+||+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+|
T Consensus 103 ivmEy~~gg~L~~~l~~~~-------------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vK 166 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV-------------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIK 166 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEE
T ss_pred EEEEcCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEE
Confidence 9999999999999998654 389999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
|+|||+|+..... ........||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..++...+.. .
T Consensus 167 l~DFGla~~~~~~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~---~ 241 (304)
T 3ubd_A 167 LTDFGLSKESIDH--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK---A 241 (304)
T ss_dssp EESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---C
T ss_pred ecccccceeccCC--CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc---C
Confidence 9999999865432 2223456899999999999999999999999999999999999999988765544433322 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 915 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ 915 (969)
..+ .+...+.++.+++.+||+.||++|||+.
T Consensus 242 ~~~------------~p~~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 242 KLG------------MPQFLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp CCC------------CCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred CCC------------CCCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence 111 1222346789999999999999999863
No 23
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.6e-49 Score=440.13 Aligned_cols=251 Identities=21% Similarity=0.353 Sum_probs=212.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.+.|+..++||+|+||.||+|++..+|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 4579999999999999999999999999999999965432 2235688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
||||+||+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+
T Consensus 227 mEy~~gG~L~~~i~~~--------------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~ 289 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT--------------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 289 (423)
T ss_dssp EECCTTEEHHHHHHHS--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEEC
T ss_pred EeCCCCCcHHHHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEe
Confidence 9999999999999743 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+|+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.........+......
T Consensus 290 DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-- 365 (423)
T 4fie_A 290 DFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-- 365 (423)
T ss_dssp CCTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--
T ss_pred cCccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--
Confidence 999998775432 2334568999999999999999999999999999999999999999877655444333221110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. ..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 366 --------~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 --------RL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --------CC--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --------CC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01 111223467899999999999999999999875
No 24
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-48 Score=483.88 Aligned_cols=452 Identities=21% Similarity=0.219 Sum_probs=369.2
Q ss_pred CCCeEEEEecCCCCCCCC-CccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC--cccCCCCc
Q 002085 72 FNSVTGISLRHKDITQKI-PPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSD--IDRISGLQ 148 (969)
Q Consensus 72 ~~~v~~l~l~~~~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~ 148 (969)
..+++.|+|+++...+.+ |..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.+|.. |.++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 356889999999777777 678999999999999999999888999999999999999999999877665 89999999
Q ss_pred EEecCCCCCCCcCC-CcccCcccccceecccccccCcCCcccCCC--CCcceeecccCCCCCCCCCCccccccCC-----
Q 002085 149 CIDLGGNNFSGDIP-RSIGRLSELQTLYLYMNEFNGTFPKEIGDL--SNLEVLGLAYNSNFKPAMIPIEFGMLKK----- 220 (969)
Q Consensus 149 ~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~~~~~~~~p~~~~~l~~----- 220 (969)
+|+|++|.+++..+ ..|+++++|++|+|++|++++..|..+..+ ++|+.|+++.|.+. ...|..++.+++
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~--~~~~~~~~~~~~~~~~~ 204 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLY--SRVSVDWGKCMNPFRNM 204 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSC--CCCCCCCCSSSCTTTTC
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccc--cccccchhhcCCccccC
Confidence 99999999987655 578999999999999999998888888877 88889999888743 445555555554
Q ss_pred -CcEEEccCCcccccCchhhcC--------------------------------------CCchhhhhccCCcCCCCCCc
Q 002085 221 -LKTLWMTEANLIGEIPEAMSN--------------------------------------LSSLEILALNGNHLEGAIPS 261 (969)
Q Consensus 221 -L~~L~L~~n~l~~~~p~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~p~ 261 (969)
|+.|++++|++.+.+|..+.. .++|+.|+|++|.+++..|.
T Consensus 205 ~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~ 284 (844)
T 3j0a_A 205 VLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR 284 (844)
T ss_dssp CBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC
T ss_pred ceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChh
Confidence 888888888776665544432 15688888888888877777
Q ss_pred hhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccc-----
Q 002085 262 GLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIG----- 335 (969)
Q Consensus 262 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----- 335 (969)
.+..+++|+.|+|++|++++..|..+..+ +|+.|+|++|++++..|..|..+++|+.|++++|++.+..+..+.
T Consensus 285 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 364 (844)
T 3j0a_A 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKL 364 (844)
T ss_dssp CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCC
T ss_pred hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCC
Confidence 88888888888888888888777777665 688888888888877788888888888888888888765554433
Q ss_pred -cccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCcc---ccccccEEEeecc
Q 002085 336 -VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK---TAWNLTRLEISNN 411 (969)
Q Consensus 336 -~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~~L~~L~Ls~N 411 (969)
.+.+.+|-...+ ..+++|+.|++++|+++ .+|.. ..+++.|++++|++++..... ..++|+.|+|++|
T Consensus 365 ~~L~Ls~N~l~~i----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N 436 (844)
T 3j0a_A 365 QTLDLRDNALTTI----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQN 436 (844)
T ss_dssp CEEEEETCCSCCC----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESC
T ss_pred CEEECCCCCCCcc----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCC
Confidence 333444433333 33789999999999999 66654 468999999999998643321 3478999999999
Q ss_pred ccCCCccc-ccCCcccchhhcccCCccc-----cccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccc
Q 002085 412 RFSGQIQR-GVGSWKNLIVFKASNNLFS-----GEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNEL 485 (969)
Q Consensus 412 ~l~~~~~~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 485 (969)
++++..+. .+..+++|+.|++++|.++ +..+..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|
T Consensus 437 ~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 516 (844)
T 3j0a_A 437 RFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRL 516 (844)
T ss_dssp CCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCC
T ss_pred cccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCC
Confidence 99976554 4667899999999999997 45567789999999999999999998899999999999999999999
Q ss_pred cCCCCcccccccccceEeccCccccccCCCccccccccEEEeecCcCCCCCC
Q 002085 486 SGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYGNIP 537 (969)
Q Consensus 486 ~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~~~~p 537 (969)
++..|..+. ++|+.|||++|+|+|.+|..+. .|+.|++++|++.+..+
T Consensus 517 ~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 517 TVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--SLSVLDITHNKFICECE 564 (844)
T ss_dssp SSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--SCCEEEEEEECCCCSSS
T ss_pred CccChhhhh--ccccEEECCCCcCCCCChhHhC--CcCEEEecCCCcccccc
Confidence 987777666 8999999999999999887765 58899999999988776
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-48 Score=464.69 Aligned_cols=459 Identities=20% Similarity=0.183 Sum_probs=358.1
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|+++++.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 35888999999988887888889999999999999988777788889999999999999988777788899999999999
Q ss_pred CCCCCCCcCCCcccCcccccceecccccccC-cCCcccCCCCCcceeecccCCCCCCCCCCccccccCCC----cEEEcc
Q 002085 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNG-TFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKL----KTLWMT 227 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L----~~L~L~ 227 (969)
++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++ ....|..++.+++| +.|+++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l--~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI--QSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC--CEECGGGGHHHHTCTTCCCEEECT
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc--ceecHHHccchhccchhhhhcccC
Confidence 9999886655578889999999999998886 4688888999999999998863 34456778888888 888999
Q ss_pred CCcccccCchhhcCCCchhhhhccCCcCCCC-CCch------------------------------hhcCc--ccchhhc
Q 002085 228 EANLIGEIPEAMSNLSSLEILALNGNHLEGA-IPSG------------------------------LFLLN--NLTQLFL 274 (969)
Q Consensus 228 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~------------------------------l~~l~--~L~~L~L 274 (969)
+|.+.+..|..|..+ +|+.|++++|..... ++.. +..+. .++.+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 988888888877766 788888887732210 0111 11111 1233334
Q ss_pred cCc-ccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcc----ccccccc-CcccccC
Q 002085 275 YDN-ILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPAS----IGVVAFE-NNLSGAV 347 (969)
Q Consensus 275 ~~N-~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~~-n~l~~~~ 347 (969)
++| .+.+.+|..+... +|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|.. +..+.+. |.+.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcccccc
Confidence 444 4444555555544 4666666666666 455556656 6666666666665 33321 1122222 2233333
Q ss_pred CCCCCCCccCcEEEcccccccCCC--CcccccccCCCccccCCCccccccCc-cccccccEEEeeccccCCCcc-cccCC
Q 002085 348 PKSLGNCRTLRTVQLYSNRFSGEL--PTGLWTTFNLSSLMLSDNTISGELPS-KTAWNLTRLEISNNRFSGQIQ-RGVGS 423 (969)
Q Consensus 348 p~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~L~~L~Ls~N~l~~~~~-~~~~~ 423 (969)
+. ..+++|+.|++++|++++.. |..+..+++|+.|++++|.+++..+. ...++|++|++++|.+++..+ ..+..
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 419 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 419 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhc
Confidence 33 67899999999999998554 77888999999999999999875554 234689999999999998776 57889
Q ss_pred cccchhhcccCCccccccCccccCccccchhhccCcccC-CCCCcccccccCCCEEEccCccccCCCCcccccccccceE
Q 002085 424 WKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLS-GKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSL 502 (969)
Q Consensus 424 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 502 (969)
+++|++|++++|.+++..|..|..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++..|..|.++++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 999999999999999999999999999999999999998 6789999999999999999999998889999999999999
Q ss_pred eccCccccccCCCcccccc-ccEEEeecCcCCCCCCcc
Q 002085 503 DLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDE 539 (969)
Q Consensus 503 ~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~ 539 (969)
+|++|++++..|..+..++ |++|++++|+++|.+|..
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999999987777788885 999999999999998853
No 26
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-48 Score=424.57 Aligned_cols=266 Identities=26% Similarity=0.300 Sum_probs=201.8
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC----ce
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN----SK 711 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 711 (969)
++|...++||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||++++++.+++ ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4677889999999999999998 58899999985432 11223345666667889999999999997654 57
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC-----CCCeEecCCCCCcEEEC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC-----TPQIIHRDVKSSNILLD 786 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~Nill~ 786 (969)
|||||||++|+|.++++.. .++|..+.+++.|+|.||+|||+++ .++|+||||||+|||++
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~--------------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~ 142 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY--------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 142 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC--------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred EEEecCCCCCcHHHHHHhC--------------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC
Confidence 9999999999999999753 3899999999999999999999752 45899999999999999
Q ss_pred CCCcEEEeecccceecccCCCCc--cccccccCcccCchhhcccC------CCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPH--TMSAVAGSFGYFAPEYAYTT------KVNEKIDIYSFGVVLLELVTGKEANYGDE 858 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg~~p~~~~~ 858 (969)
.++.+||+|||+|+......... ......||+.|||||++.+. .++.++|||||||++|||+||+.|+....
T Consensus 143 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~ 222 (303)
T 3hmm_A 143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222 (303)
T ss_dssp TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCC
T ss_pred CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccc
Confidence 99999999999998775443322 22345799999999998764 36779999999999999999987764322
Q ss_pred ccc-----------hHHHHHHHhhccCCchhhhccCCCC-cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 859 HTS-----------LAEWAWRHYAEEKPITDALDKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 859 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
... ....+........ ..+.+.. ....+.+..+.+++.+||+.||++||||.||++.|+++..
T Consensus 223 ~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 223 DYQLPYYDLVPSDPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccccchhcccccchHHHHHHHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 110 1111111111110 1111111 1233566789999999999999999999999999998863
No 27
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-48 Score=471.21 Aligned_cols=455 Identities=19% Similarity=0.148 Sum_probs=373.8
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|++++|.+++..|.+|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 57999999999999988999999999999999999999888999999999999999999999888789999999999999
Q ss_pred CCCCCCC-cCCCcccCcccccceecccccccCcCCcccCCCCCcc----eeecccCCCCCCCCCCccccccCCCcEEEcc
Q 002085 153 GGNNFSG-DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLE----VLGLAYNSNFKPAMIPIEFGMLKKLKTLWMT 227 (969)
Q Consensus 153 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~ 227 (969)
++|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|.+ ..+|.......+|+.|+++
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l---~~~~~~~~~~~~L~~L~L~ 212 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI---DFIQDQAFQGIKLHELTLR 212 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCC---CEECTTTTTTCEEEEEEEE
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCc---ceeCcccccCceeeeeecc
Confidence 9999986 6799999999999999999999998888888887765 899999963 3344444444489999999
Q ss_pred CCccc-ccCchhhcCCCchhhhhc---------------------------------cCCcCCCCCCchhhcCcccchhh
Q 002085 228 EANLI-GEIPEAMSNLSSLEILAL---------------------------------NGNHLEGAIPSGLFLLNNLTQLF 273 (969)
Q Consensus 228 ~n~l~-~~~p~~~~~l~~L~~L~L---------------------------------~~N~l~~~~p~~l~~l~~L~~L~ 273 (969)
+|.+. +.+|..+.++++|+.+++ ..|.+++.+|. +..+++|+.|+
T Consensus 213 ~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~ 291 (606)
T 3vq2_A 213 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMS 291 (606)
T ss_dssp SCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEE
T ss_pred CCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEE
Confidence 98776 344555666665555444 45555555554 66667777777
Q ss_pred ccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCC----ccccccccc-Cccccc-
Q 002085 274 LYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVP----ASIGVVAFE-NNLSGA- 346 (969)
Q Consensus 274 L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~~-n~l~~~- 346 (969)
+++|.++ .+| .+... +|+.|++++|.+ +.+| .+ .+++|+.|++++|+..+.++ ..+..+.+. |++.+.
T Consensus 292 l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 292 LAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp EESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEE
T ss_pred ecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCc
Confidence 7777765 334 33332 577777777777 3555 33 66677777777764443322 112223333 333333
Q ss_pred -CCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCc-c--ccccccEEEeeccccCCCcccccC
Q 002085 347 -VPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPS-K--TAWNLTRLEISNNRFSGQIQRGVG 422 (969)
Q Consensus 347 -~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~--~~~~L~~L~Ls~N~l~~~~~~~~~ 422 (969)
+|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++++..+. . ..++|++|++++|++++..|..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 3777889999999999999998 4778899999999999999999988773 2 347899999999999999999999
Q ss_pred CcccchhhcccCCcccc-ccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccce
Q 002085 423 SWKNLIVFKASNNLFSG-EIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVS 501 (969)
Q Consensus 423 ~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 501 (969)
.+++|++|++++|.+++ .+|..|+.+++|+.|+|++|++++..|..+..+++|+.|+|++|++++.+|..|+++++|+.
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 99999999999999998 48999999999999999999999988999999999999999999999988999999999999
Q ss_pred EeccCccccccCCCccccc-c-ccEEEeecCcCCCCCCc
Q 002085 502 LDLSGNQFSGEIPPEIGQL-K-LNTFNLSSNKLYGNIPD 538 (969)
Q Consensus 502 L~ls~N~l~g~~p~~~~~l-~-L~~l~ls~N~l~~~~p~ 538 (969)
|||++|+|+ .+|..+..+ + |++|++++|++.+..+-
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999 788888888 4 99999999999987763
No 28
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.1e-49 Score=467.21 Aligned_cols=455 Identities=20% Similarity=0.219 Sum_probs=220.2
Q ss_pred CCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCc
Q 002085 62 PCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI 141 (969)
Q Consensus 62 ~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 141 (969)
.|.|.|+ |+. ++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|
T Consensus 3 ~C~~~~~-c~~--------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 70 (549)
T 2z81_A 3 SCDASGV-CDG--------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF 70 (549)
T ss_dssp EECTTSE-EEC--------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCCce-EEC--------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc
Confidence 4999998 853 233333 2333332 455566666665555555555556666666666665555555555
Q ss_pred ccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccC-cCCcccCCCCCcceeecccCCCCCCCCCC-ccccccC
Q 002085 142 DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNG-TFPKEIGDLSNLEVLGLAYNSNFKPAMIP-IEFGMLK 219 (969)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~~~~~~~~p-~~~~~l~ 219 (969)
.++++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|. ..+.+| ..|++++
T Consensus 71 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~--~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE--TFSEIRRIDFAGLT 148 (549)
T ss_dssp TTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS--SCCEECTTTTTTCC
T ss_pred cccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc--cccccCHhhhhccc
Confidence 555666666666666554444445555666666666665554 234455555666666665553 112222 3455555
Q ss_pred CCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchh-hcCcccchhhccCcccccCC--CCchh--hccccc
Q 002085 220 KLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGL-FLLNNLTQLFLYDNILSGEI--PSSVE--ALKLTD 294 (969)
Q Consensus 220 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~--~~~~~--~~~L~~ 294 (969)
+|++|++++|++.+.+|..+.++++|++|++++|.+. .+|..+ ..+++|++|++++|++++.. |..+. ..+|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 6666666655555555555555555666666555554 233332 23555555666665555431 11111 114555
Q ss_pred ccccCccccccCCc----cccCcccchhhhhccccCcCcCC---------cccc---cccccCc-cc-----ccCCCCCC
Q 002085 295 IDLSMNNLTGSIPE----EFGKLKNLQLLGLFSNHLSGEVP---------ASIG---VVAFENN-LS-----GAVPKSLG 352 (969)
Q Consensus 295 L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p---------~~~~---~l~~~n~-l~-----~~~p~~l~ 352 (969)
|++++|.+++..+. .+..+++|+.+++++|.+.+... ..++ .+...++ +. ..++..+.
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~ 307 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYS 307 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHH
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhh
Confidence 55555555433222 22334445555555554443100 0000 0000000 00 00011111
Q ss_pred CCccCcEEEcccccccCCCCccc-ccccCCCccccCCCccccccCc-----cccccccEEEeeccccCCCcc--cccCCc
Q 002085 353 NCRTLRTVQLYSNRFSGELPTGL-WTTFNLSSLMLSDNTISGELPS-----KTAWNLTRLEISNNRFSGQIQ--RGVGSW 424 (969)
Q Consensus 353 ~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-----~~~~~L~~L~Ls~N~l~~~~~--~~~~~l 424 (969)
...+|+.|++++|++. .+|..+ ..+++|+.|+|++|++++.+|. ...++|++|+|++|++++..+ ..+..+
T Consensus 308 ~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 308 LLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp HSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred hcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 2334555555555554 444444 2455555555555555544321 122455555555555554322 334555
Q ss_pred ccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEec
Q 002085 425 KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDL 504 (969)
Q Consensus 425 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 504 (969)
++|++|++++|+|+ .+|..+..+++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++.+ ..+++|++|||
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~L 458 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYI 458 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEEC
Confidence 55555555555555 44555555555555555555555 2333221 34555555555554321 24445555555
Q ss_pred cCccccccCCCccccc-cccEEEeecCcCCCCCCccccc
Q 002085 505 SGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNN 542 (969)
Q Consensus 505 s~N~l~g~~p~~~~~l-~L~~l~ls~N~l~~~~p~~~~~ 542 (969)
++|+|+ .+|. .+.+ .|++|+|++|++++.+|..+..
T Consensus 459 s~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 495 (549)
T 2z81_A 459 SRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDR 495 (549)
T ss_dssp CSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGG
T ss_pred CCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhc
Confidence 555554 4444 2233 2555555555555444444433
No 29
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-48 Score=471.80 Aligned_cols=463 Identities=18% Similarity=0.255 Sum_probs=386.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCC----CCCCc-c-eeeC---CCeEEEEecCCCCCCCCCccccCCCcccE
Q 002085 31 SPNTEERTILLNLKQQLGNPPSLQSWTSTSSP----CDWPE-I-TCTF---NSVTGISLRHKDITQKIPPIICDLKNLTT 101 (969)
Q Consensus 31 ~~~~~~~~all~~k~~~~~~~~l~sw~~~~~~----c~w~g-v-~C~~---~~v~~l~l~~~~l~~~~~~~~~~l~~L~~ 101 (969)
+..+++.+.-.++++-+..-. -.+|....+. |.|.. . .|.- ..|++ ... .+++.
T Consensus 23 ~~~~~~~~d~~aL~~~~~~~~-~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~~~-------------~~V~~ 85 (636)
T 4eco_A 23 SRTAEYIKDYLALKEIWDALN-GKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---NSN-------------GRVTG 85 (636)
T ss_dssp CCCCHHHHHHHHHHHHHHHTT-GGGCCCCC------CCCCCSSCGGGTTCCTTEEE---CTT-------------CCEEE
T ss_pred hhhhhHHHHHHHHHHHHHHcC-CCCcccCCcCCccCCCCCCCCCcccccCCCCeEE---cCC-------------CCEEE
Confidence 345666677777777765433 3579744433 47963 2 2443 34543 211 47899
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCCcC------CC------CCCCCcccCCCCcEEecCCCCCCCcCCCcccC-c
Q 002085 102 IDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYF------VG------PIPSDIDRISGLQCIDLGGNNFSGDIPRSIGR-L 168 (969)
Q Consensus 102 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l 168 (969)
|+|++|+++|.+|++|++|++|++|+|++|.+ .| .+|... +..|+ ++++.|.+.+.+|..++. +
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~ 162 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLI 162 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHH
Confidence 99999999999999999999999999999976 22 334333 55677 899999999888877762 2
Q ss_pred cc------------------ccceecc--cccccCcCCcccCCCCCcceeecccCCCCCCCC-----------------C
Q 002085 169 SE------------------LQTLYLY--MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAM-----------------I 211 (969)
Q Consensus 169 ~~------------------L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~-----------------~ 211 (969)
.. ++.+++. +|++++ +|..|+++++|++|+|++|++. +. +
T Consensus 163 ~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~--~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 163 KDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFV--AENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCC--GGGBSSSCSCTTSHHHHHHT
T ss_pred HHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccc--cccccccccccccchhcccC
Confidence 22 2233332 789998 8999999999999999999743 32 8
Q ss_pred Ccccc--ccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCc-CCC-CCCchhhcC------cccchhhccCccccc
Q 002085 212 PIEFG--MLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNH-LEG-AIPSGLFLL------NNLTQLFLYDNILSG 281 (969)
Q Consensus 212 p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~ 281 (969)
|..++ ++++|++|+|++|++.+.+|+.|+++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~- 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK- 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-
Confidence 99999 99999999999999999999999999999999999999 998 899999887 99999999999999
Q ss_pred CCCC--chhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCcc-C
Q 002085 282 EIPS--SVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRT-L 357 (969)
Q Consensus 282 ~~~~--~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~-L 357 (969)
.+|. .+..+ +|+.|++++|+++|.+| .|+.+++|+.|++++|+++ .+|..+.++++ |
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~------------------~lp~~l~~l~~~L 379 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT------------------EIPANFCGFTEQV 379 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE------------------ECCTTSEEECTTC
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc------------------cccHhhhhhcccC
Confidence 7888 77776 79999999999999999 9999999999999999988 56677888999 9
Q ss_pred cEEEcccccccCCCCccccccc--CCCccccCCCccccccCcccc---------ccccEEEeeccccCCCcccccCCccc
Q 002085 358 RTVQLYSNRFSGELPTGLWTTF--NLSSLMLSDNTISGELPSKTA---------WNLTRLEISNNRFSGQIQRGVGSWKN 426 (969)
Q Consensus 358 ~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~---------~~L~~L~Ls~N~l~~~~~~~~~~l~~ 426 (969)
++|++++|+++ .+|..+..+. +|+.|++++|.+++.+|.... .+|++|+|++|++++..+..+..+++
T Consensus 380 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~ 458 (636)
T 4eco_A 380 ENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSP 458 (636)
T ss_dssp CEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCC
T ss_pred cEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCC
Confidence 99999999999 8898887765 899999999999998876443 48999999999999666566777999
Q ss_pred chhhcccCCccccccCccccC--------ccccchhhccCcccCCCCCcccc--cccCCCEEEccCccccCCCCcccccc
Q 002085 427 LIVFKASNNLFSGEIPVELTS--------LSHLNTLLLDGNKLSGKLPSQIV--SWTSLNNLNLARNELSGEIPKAIGSL 496 (969)
Q Consensus 427 L~~L~l~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l 496 (969)
|++|++++|+|+ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..++++
T Consensus 459 L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 535 (636)
T 4eco_A 459 LSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535 (636)
T ss_dssp CSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred CCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC
Confidence 999999999999 66654432 239999999999999 7998887 99999999999999997 99999999
Q ss_pred cccceEec------cCccccccCCCcccccc-ccEEEeecCcCCCCCCcccc
Q 002085 497 LVMVSLDL------SGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFN 541 (969)
Q Consensus 497 ~~L~~L~l------s~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~ 541 (969)
++|+.|+| ++|++.+.+|..++.++ |++|+|++|++ +.||..+.
T Consensus 536 ~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~ 586 (636)
T 4eco_A 536 STLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT 586 (636)
T ss_dssp SSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred CCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh
Confidence 99999999 56889999999999996 99999999999 78997654
No 30
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-47 Score=414.85 Aligned_cols=254 Identities=22% Similarity=0.367 Sum_probs=193.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC-----
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN----- 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 709 (969)
+++|+..+.||+|+||+||+|++..+|+.||||+++... .+...+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 457899999999999999999999999999999986543 3445578999999999999999999999987544
Q ss_pred -------ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCc
Q 002085 710 -------SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 782 (969)
Q Consensus 710 -------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 782 (969)
..|+|||||++|+|.+++..... ....++..++.++.||+.||+|||++ +|+||||||+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~----------~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~N 148 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCT----------IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSN 148 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCS----------GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCC----------CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHH
Confidence 36899999999999999986543 12356777899999999999999998 99999999999
Q ss_pred EEECCCCcEEEeecccceecccCCCCc----------cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCC
Q 002085 783 ILLDSEFKAKIADFGLAKMLAKQGEPH----------TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE 852 (969)
Q Consensus 783 ill~~~~~~kl~Dfgla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~ 852 (969)
||++.++.+||+|||+|+.+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++
T Consensus 149 ILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~--- 225 (299)
T 4g31_A 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--- 225 (299)
T ss_dssp EEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---
T ss_pred eEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---
Confidence 999999999999999998765432211 2234579999999999999999999999999999999996
Q ss_pred CCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 853 ANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 853 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
||.+.. +....+ ...... . ..+...+..+...+++.+||+.||++|||+.|+++
T Consensus 226 Pf~~~~--~~~~~~-~~~~~~---------~-~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 226 PFSTQM--ERVRTL-TDVRNL---------K-FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp CCSSHH--HHHHHH-HHHHTT---------C-CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcc--HHHHHH-HHHhcC---------C-CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 665321 111111 111110 0 11222334456788999999999999999999874
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-47 Score=468.22 Aligned_cols=418 Identities=19% Similarity=0.235 Sum_probs=318.8
Q ss_pred CcccEEEccCCCCCCCCCcccCCCCCCCEEec-cCCcCCCCCCCCcccCC-CCc--------E------Eec-CCCCCCC
Q 002085 97 KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDL-SQNYFVGPIPSDIDRIS-GLQ--------C------IDL-GGNNFSG 159 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~l~~l~-~L~--------~------L~L-~~N~l~~ 159 (969)
.+++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..|....... .+. . ++. ....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 99988877543211110 000 0 000 0000000
Q ss_pred -----------cCCCcccCcccccceeccc--ccccCcCCcccCCCCCcceeecccCCCCCC---------------CCC
Q 002085 160 -----------DIPRSIGRLSELQTLYLYM--NEFNGTFPKEIGDLSNLEVLGLAYNSNFKP---------------AMI 211 (969)
Q Consensus 160 -----------~~p~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~---------------~~~ 211 (969)
..+........++.+.+.. |++++ +|..|+++++|++|+|++|++... +.+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0111112233444454543 66766 666777777777777777753320 026
Q ss_pred Ccccc--ccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCc-CCC-CCCchhhcCc-------ccchhhccCcccc
Q 002085 212 PIEFG--MLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNH-LEG-AIPSGLFLLN-------NLTQLFLYDNILS 280 (969)
Q Consensus 212 p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~ 280 (969)
|..++ ++++|+.|+|++|++.+.+|..|+++++|+.|+|++|+ ++| .+|..++.++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77766 78888888888888888888888888888888888887 777 6777776665 8888888888888
Q ss_pred cCCCC--chhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCcc-
Q 002085 281 GEIPS--SVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRT- 356 (969)
Q Consensus 281 ~~~~~--~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~- 356 (969)
.+|. .+..+ +|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+.++++
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~------------------~lp~~l~~l~~~ 620 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE------------------EIPEDFCAFTDQ 620 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS------------------CCCTTSCEECTT
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc------------------cchHHHhhcccc
Confidence 6776 66655 6888888888888 677 7888888888888888887 45556777888
Q ss_pred CcEEEcccccccCCCCcccccccC--CCccccCCCccccccCccc-------cccccEEEeeccccCCCcccccCCcccc
Q 002085 357 LRTVQLYSNRFSGELPTGLWTTFN--LSSLMLSDNTISGELPSKT-------AWNLTRLEISNNRFSGQIQRGVGSWKNL 427 (969)
Q Consensus 357 L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~~-------~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 427 (969)
|+.|+|++|+++ .+|..+..+.. |+.|+|++|++++.+|... ..+|+.|+|++|+++...+..+..+++|
T Consensus 621 L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L 699 (876)
T 4ecn_A 621 VEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699 (876)
T ss_dssp CCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCC
T ss_pred CCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCC
Confidence 888888888888 77877776654 8889999998888766432 2479999999999996555555689999
Q ss_pred hhhcccCCccccccCccccC--------ccccchhhccCcccCCCCCcccc--cccCCCEEEccCccccCCCCccccccc
Q 002085 428 IVFKASNNLFSGEIPVELTS--------LSHLNTLLLDGNKLSGKLPSQIV--SWTSLNNLNLARNELSGEIPKAIGSLL 497 (969)
Q Consensus 428 ~~L~l~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 497 (969)
+.|+|++|+|+ .+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+++++
T Consensus 700 ~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~ 776 (876)
T 4ecn_A 700 STIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSS 776 (876)
T ss_dssp SEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCT
T ss_pred CEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCC
Confidence 99999999999 66665543 349999999999999 7899887 99999999999999997 899999999
Q ss_pred ccceEeccC------ccccccCCCcccccc-ccEEEeecCcCCCCCCcccc
Q 002085 498 VMVSLDLSG------NQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFN 541 (969)
Q Consensus 498 ~L~~L~ls~------N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~ 541 (969)
+|+.|+|++ |++.+.+|..++.++ |+.|+|++|++ +.||..+.
T Consensus 777 ~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~ 826 (876)
T 4ecn_A 777 QLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT 826 (876)
T ss_dssp TCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred CCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc
Confidence 999999976 889999999999996 99999999999 89998654
No 32
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=448.84 Aligned_cols=458 Identities=21% Similarity=0.169 Sum_probs=383.6
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.++.++.+++. +|..+. +++++|||++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~~-ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 11 TYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EEECCSSCCSS-CCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEEeCCCCccc-cCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 35555555543 555442 579999999999998888899999999999999999998888899999999999999999
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCc
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP 236 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 236 (969)
+++..|..|+++++|++|++++|++++..+..|+++++|++|++++|.+.. ..+|..|+++++|++|++++|++.+..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS-FKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCC-CCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred CCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccce-ecChhhhcccCCCCEEeCcCCccceecH
Confidence 998888999999999999999999997776689999999999999997432 1368899999999999999999999999
Q ss_pred hhhcCCCch----hhhhccCCcCCCCCCchhhcCcccchhhccCccccc-------------------------------
Q 002085 237 EAMSNLSSL----EILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSG------------------------------- 281 (969)
Q Consensus 237 ~~~~~l~~L----~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~------------------------------- 281 (969)
..++.+++| +.|++++|.+++..|..+... +|+.|++++|....
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~ 245 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEE
T ss_pred HHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhh
Confidence 999988888 889999999998877776655 89999999884321
Q ss_pred CCCCchh---hcccccccccCc-cccccCCccccCcccchhhhhccccCcCcCCcccc-----cccccCcccccCCCCCC
Q 002085 282 EIPSSVE---ALKLTDIDLSMN-NLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIG-----VVAFENNLSGAVPKSLG 352 (969)
Q Consensus 282 ~~~~~~~---~~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~~n~l~~~~p~~l~ 352 (969)
.....+. .+.++.+++++| .+.+..|..|..+++|+.|++++|.+. .+|..+. .+.+.++....+|. .
T Consensus 246 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~--~ 322 (570)
T 2z63_A 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPT--L 322 (570)
T ss_dssp CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCB--C
T ss_pred cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCc--c
Confidence 1111222 235677888888 788889999999999999999999998 4665443 23344444446665 4
Q ss_pred CCccCcEEEcccccccCCCCcccccccCCCccccCCCcccccc--Cc--cccccccEEEeeccccCCCcccccCCcccch
Q 002085 353 NCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGEL--PS--KTAWNLTRLEISNNRFSGQIQRGVGSWKNLI 428 (969)
Q Consensus 353 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 428 (969)
.+++|+.|++++|.+.+..+. ..+++|+.|++++|++++.. +. ...++|++|++++|.+++..+. +..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCC
Confidence 788899999999998877665 67889999999999998653 22 2346899999999999976665 89999999
Q ss_pred hhcccCCccccccC-ccccCccccchhhccCcccCCCCCcccccccCCCEEEccCcccc-CCCCcccccccccceEeccC
Q 002085 429 VFKASNNLFSGEIP-VELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELS-GEIPKAIGSLLVMVSLDLSG 506 (969)
Q Consensus 429 ~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~ 506 (969)
.|++++|.+++..| ..+..+++|++|+|++|++++..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999997766 57889999999999999999888999999999999999999998 57899999999999999999
Q ss_pred ccccccCCCcccccc-ccEEEeecCcCCCCCCcccccccc
Q 002085 507 NQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNLAY 545 (969)
Q Consensus 507 N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~ 545 (969)
|++++..|..++.++ |++|++++|++++.+|..+..+..
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 519 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTS 519 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccC
Confidence 999988899999885 999999999999887776765543
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-46 Score=444.38 Aligned_cols=430 Identities=20% Similarity=0.197 Sum_probs=251.0
Q ss_pred EEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCC
Q 002085 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155 (969)
Q Consensus 76 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 155 (969)
+.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 35777777777 4666554 77777777777777766677777777777777777777666777777777777777777
Q ss_pred CCCCcCCCcccCcccccceecccccccC-cCCcccCCCCCcceeecccCCCCCCCCCCccccccCCC--cEEEccCCcc-
Q 002085 156 NFSGDIPRSIGRLSELQTLYLYMNEFNG-TFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKL--KTLWMTEANL- 231 (969)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L--~~L~L~~n~l- 231 (969)
+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+.. ..+..+++| +.|++++|++
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-----~~~~~l~~L~L~~L~l~~n~l~ 151 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK-----SSVLPIAHLNISKVLLVLGETY 151 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG-----GGGGGGTTSCEEEEEEEECTTT
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch-----hhccccccceeeEEEeeccccc
Confidence 777 45555 67777777777777776 366777777777777777775322 456667777 7777777777
Q ss_pred -cccCchhhcCCC-chhhhhccCCcCCCCCCc-hhhcCcccchhhccCcc-------cccCCCCchhhcccccccccCcc
Q 002085 232 -IGEIPEAMSNLS-SLEILALNGNHLEGAIPS-GLFLLNNLTQLFLYDNI-------LSGEIPSSVEALKLTDIDLSMNN 301 (969)
Q Consensus 232 -~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~~~~~~~~~L~~L~Ls~N~ 301 (969)
.+..|..+..+. +...+++++|++.+.+++ .+..+++|+.|++++|. +.+.+|......+|+.|++++|.
T Consensus 152 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 152 GEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp TSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEE
T ss_pred ccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccc
Confidence 666676666654 233456666666554443 34456666666666665 44444422222246666666665
Q ss_pred ccccCCcccc---CcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCC-ccccc
Q 002085 302 LTGSIPEEFG---KLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP-TGLWT 377 (969)
Q Consensus 302 l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~ 377 (969)
+++..+..+. ..++|++|++++|+++|.+|..+.. ...+++++|+.+++++|.+ .+| ..+..
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~------------~~~~~l~~L~~l~l~~n~~--~~p~~~~~~ 297 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFD------------YSGTSLKALSIHQVVSDVF--GFPQSYIYE 297 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCC------------CCSCCCCEEEEEEEEECCC--CSCTHHHHH
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhh------------cccccCceeEeccccccce--ecchhhhhc
Confidence 5543222111 1235666666666665544432200 0014455555555555555 333 33333
Q ss_pred c---cCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCcccc--ccCccccCccccc
Q 002085 378 T---FNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSG--EIPVELTSLSHLN 452 (969)
Q Consensus 378 l---~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~ 452 (969)
+ .+|+.|++++|.+.+.......++|++|+|++|++++.+|..++.+++|++|++++|++++ .+|..+..+++|+
T Consensus 298 ~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~ 377 (520)
T 2z7x_B 298 IFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQ 377 (520)
T ss_dssp HHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCC
T ss_pred ccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCC
Confidence 3 4455555555555432211233455555555555555555555555555555555555554 3444555555555
Q ss_pred hhhccCcccCCCCCcc-cccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecC
Q 002085 453 TLLLDGNKLSGKLPSQ-IVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSN 530 (969)
Q Consensus 453 ~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N 530 (969)
+|+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+. ++|+.|||++|+|+ .+|..+..++ |++|++++|
T Consensus 378 ~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 378 QLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp EEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCC
Confidence 5555555555434432 44555555555555555555544443 45555555555555 5555554443 555555555
Q ss_pred cCC
Q 002085 531 KLY 533 (969)
Q Consensus 531 ~l~ 533 (969)
+++
T Consensus 455 ~l~ 457 (520)
T 2z7x_B 455 QLK 457 (520)
T ss_dssp CCC
T ss_pred cCC
Confidence 555
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.9e-46 Score=443.61 Aligned_cols=463 Identities=20% Similarity=0.191 Sum_probs=385.2
Q ss_pred CCCCcceee----CCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC
Q 002085 63 CDWPEITCT----FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP 138 (969)
Q Consensus 63 c~w~gv~C~----~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 138 (969)
|++.+++.- ..+++.|+++++.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 445554431 2579999999999999889999999999999999999998888999999999999999999998877
Q ss_pred CCcccCCCCcEEecCCCCCCC-cCCCcccCcccccceecccccccCcCC-cccCCCCCcceeecccCCCCCCCCCCcccc
Q 002085 139 SDIDRISGLQCIDLGGNNFSG-DIPRSIGRLSELQTLYLYMNEFNGTFP-KEIGDLSNLEVLGLAYNSNFKPAMIPIEFG 216 (969)
Q Consensus 139 ~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~ 216 (969)
..|+++++|++|+|++|.+++ ..|..|+++++|++|++++|++.+.+| ..|+++++|++|++++|+ ..+..|..++
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~--l~~~~~~~l~ 169 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS--LRNYQSQSLK 169 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT--CCEECTTTTT
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc--ccccChhhhh
Confidence 779999999999999999986 467889999999999999999544554 689999999999999997 4456889999
Q ss_pred ccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCC--Cc-hhhcCcccchhhccCcccccCCCCchhh----
Q 002085 217 MLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAI--PS-GLFLLNNLTQLFLYDNILSGEIPSSVEA---- 289 (969)
Q Consensus 217 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~---- 289 (969)
.+++|++|++++|.+....+..+..+++|++|++++|++++.. |. ....+++|+.|++++|.+++..+..+..
T Consensus 170 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 170 SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 9999999999999875443334567999999999999999742 22 2335789999999999998765544432
Q ss_pred c-ccccccccCccccccC------CccccCcccchhhhhccccCcCcC-----------CcccccccccCcccccCCCCC
Q 002085 290 L-KLTDIDLSMNNLTGSI------PEEFGKLKNLQLLGLFSNHLSGEV-----------PASIGVVAFENNLSGAVPKSL 351 (969)
Q Consensus 290 ~-~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~~-----------p~~~~~l~~~n~l~~~~p~~l 351 (969)
. +|+.+++++|.+.+.. ...+..+.+|+.|++.++.+.... ...+..+.+.++..+.+|..+
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~ 329 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSF 329 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHH
T ss_pred hccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHH
Confidence 2 6999999999988642 234567788999999988775321 123444555666667888776
Q ss_pred -CCCccCcEEEcccccccCCCCc---ccccccCCCccccCCCccccccC----ccccccccEEEeeccccCCCcccccCC
Q 002085 352 -GNCRTLRTVQLYSNRFSGELPT---GLWTTFNLSSLMLSDNTISGELP----SKTAWNLTRLEISNNRFSGQIQRGVGS 423 (969)
Q Consensus 352 -~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 423 (969)
.++++|++|++++|++++.+|. .+..+++|+.|+|++|++++..+ ....++|++|+|++|+++ .+|..+..
T Consensus 330 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 408 (549)
T 2z81_A 330 SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408 (549)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCC
T ss_pred HhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcc
Confidence 5799999999999999987653 37788999999999999986543 234578999999999999 67888999
Q ss_pred cccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEe
Q 002085 424 WKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLD 503 (969)
Q Consensus 424 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 503 (969)
+++|++|++++|.|+ .+|..+ .++|+.|+|++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.||
T Consensus 409 ~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~ 479 (549)
T 2z81_A 409 PEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMK 479 (549)
T ss_dssp CTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEE
T ss_pred cccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEe
Confidence 999999999999998 455444 368999999999999643 57899999999999998 7887 57899999999
Q ss_pred ccCccccccCCCcccccc-ccEEEeecCcCCCCCC
Q 002085 504 LSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIP 537 (969)
Q Consensus 504 ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p 537 (969)
|++|+|++.+|..++.++ |+.|++++|++.+.+|
T Consensus 480 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 480 ISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999988888899885 9999999999999887
No 35
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.4e-46 Score=433.70 Aligned_cols=248 Identities=22% Similarity=0.242 Sum_probs=203.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHH---HHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEF---IAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
+++|++.++||+|+||+||+|++..+|+.||||++.+...........+ ..++++++.++|||||++++++++++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 4679999999999999999999999999999999976543222222333 3446677788999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
|+|||||+||+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-------------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~v 331 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-------------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHV 331 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-------------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEecCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCE
Confidence 99999999999999998654 389999999999999999999988 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||+|+.+... .....+||+.|||||++.+ ..|+.++||||+||++|||++|..||.+..............
T Consensus 332 KL~DFGlA~~~~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~ 407 (689)
T 3v5w_A 332 RISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407 (689)
T ss_dssp EECCCTTCEECSSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH
T ss_pred EecccceeeecCCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Confidence 99999999876432 2334689999999999975 579999999999999999999999998755444333222222
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
..... .+...+.++.+++.+|++.||++|++.
T Consensus 408 ~~~~~------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 408 TMAVE------------LPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp HCCCC------------CCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred CCCCC------------CCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 21111 122234678999999999999999873
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=443.45 Aligned_cols=436 Identities=18% Similarity=0.182 Sum_probs=372.2
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|++++|.+.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57999999999999988889999999999999999999888999999999999999999999 67766 8999999999
Q ss_pred CCCCCCC-cCCCcccCcccccceecccccccCcCCcccCCCCCc--ceeecccCCCCCCCCCCccccccC-CCcEEEccC
Q 002085 153 GGNNFSG-DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNL--EVLGLAYNSNFKPAMIPIEFGMLK-KLKTLWMTE 228 (969)
Q Consensus 153 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~~~~~~~~p~~~~~l~-~L~~L~L~~ 228 (969)
++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| ++|++++|.+......|..+..+. +...+++++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999997 578999999999999999999986 457778888 999999998644567788887776 345678899
Q ss_pred CcccccCch-hhcCCCchhhhhccCCc-------CCCCCCchhhcCcccchhhccCcccccCCCCchh----hccccccc
Q 002085 229 ANLIGEIPE-AMSNLSSLEILALNGNH-------LEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVE----ALKLTDID 296 (969)
Q Consensus 229 n~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~----~~~L~~L~ 296 (969)
|++.+.+++ .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+. ..+|+.|+
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence 998887765 68899999999999998 776665 788999999999999998864433322 23799999
Q ss_pred ccCccccccCCccc-----cCcccchhhhhccccCcCcCCc-ccccccccCcccccCCCCCCCCccCcEEEcccccccCC
Q 002085 297 LSMNNLTGSIPEEF-----GKLKNLQLLGLFSNHLSGEVPA-SIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE 370 (969)
Q Consensus 297 Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 370 (969)
+++|+++|.+|..+ +.+++|+.+++++|.+ .+|. .+.. +....+|+.|++++|.+.+.
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~--------------~~~~~~L~~L~l~~n~l~~~ 317 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYE--------------IFSNMNIKNFTVSGTRMVHM 317 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHH--------------HHHTCCCSEEEEESSCCCCC
T ss_pred eecccccCccccchhhcccccCceeEeccccccce--ecchhhhhc--------------ccccCceeEEEcCCCccccc
Confidence 99999999999998 9999999999999998 4552 2211 00125689999999998743
Q ss_pred CCcccccccCCCccccCCCccccccCccc--cccccEEEeeccccCC--CcccccCCcccchhhcccCCccccccCcc-c
Q 002085 371 LPTGLWTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFSG--QIQRGVGSWKNLIVFKASNNLFSGEIPVE-L 445 (969)
Q Consensus 371 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~ 445 (969)
. .+..+++|++|++++|++++.+|... .++|++|+|++|++++ .+|..+..+++|++|++++|.+++.+|.. +
T Consensus 318 ~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~ 395 (520)
T 2z7x_B 318 L--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395 (520)
T ss_dssp C--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSC
T ss_pred c--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchh
Confidence 2 12578899999999999998777643 4689999999999997 56678999999999999999999856654 8
Q ss_pred cCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCc-ccccc-cc
Q 002085 446 TSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPE-IGQLK-LN 523 (969)
Q Consensus 446 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~-L~ 523 (969)
..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..++ |+
T Consensus 396 ~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 396 SWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQ 471 (520)
T ss_dssp CCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred ccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCccc
Confidence 8899999999999999988887765 79999999999999 89998889999999999999999 68876 77775 99
Q ss_pred EEEeecCcCCCCCC
Q 002085 524 TFNLSSNKLYGNIP 537 (969)
Q Consensus 524 ~l~ls~N~l~~~~p 537 (969)
+|++++|++++..+
T Consensus 472 ~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 472 KIWLHTNPWDCSCP 485 (520)
T ss_dssp EEECCSSCBCCCHH
T ss_pred EEECcCCCCcccCC
Confidence 99999999998776
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-45 Score=409.70 Aligned_cols=266 Identities=24% Similarity=0.310 Sum_probs=210.2
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc------CC
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS------EN 709 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 709 (969)
++|++.+.||+|+||+||+|++..+|+.||||+++.... .....+.+.+|+++|+.++|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 579999999999999999999999999999999965433 33445778899999999999999999998764 36
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..|||||||+ |+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-------------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~ 195 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-------------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENC 195 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCC
Confidence 7899999996 68999997644 489999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCC--CCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 790 KAKIADFGLAKMLAKQG--EPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
.+||+|||+|+.+.... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+....+
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I 275 (398)
T 4b99_A 196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275 (398)
T ss_dssp CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH
T ss_pred CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99999999998764322 12234567899999999998875 4689999999999999999999999987766555544
Q ss_pred HHHhhccCC----------chhhhcc-CCCCccc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEEKP----------ITDALDK-GIAEPCY-----LEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~~~----------~~~~~~~-~~~~~~~-----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......... ....... ....+.+ ...+.++.+++.+||..||++|||+.|+++
T Consensus 276 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 433221110 0000000 0000111 112367889999999999999999999986
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-43 Score=429.98 Aligned_cols=481 Identities=21% Similarity=0.196 Sum_probs=302.0
Q ss_pred CCCCCCCCCCCCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 002085 52 SLQSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131 (969)
Q Consensus 52 ~l~sw~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 131 (969)
.+++|..+ -|..|..+.|..... .++.++.+++. +|+.+. +++++|||++|+|++..+.+|.++++|++|+|++|
T Consensus 12 ~~~~~~~~-~p~~~~~c~~~~~~~-~~~c~~~~l~~-vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N 86 (635)
T 4g8a_A 12 KLAAANSS-IPESWEPCVEVVPNI-TYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 86 (635)
T ss_dssp --------------CCSEEEETTT-EEECTTSCCSS-CCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred hhhcccCC-CCCCCCCccccCCCC-EEECCCCCcCc-cCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCC
Confidence 35666432 344577666654332 34667766663 555432 46889999999999777788999999999999999
Q ss_pred cCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCC
Q 002085 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211 (969)
Q Consensus 132 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~ 211 (969)
+|++..|.+|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+.. ...
T Consensus 87 ~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~-~~~ 165 (635)
T 4g8a_A 87 EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS-FKL 165 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC-CCC
T ss_pred cCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcccc-CCC
Confidence 9987778889999999999999999987666788999999999999999997777789999999999999997432 235
Q ss_pred CccccccCCCcEEEccCCcccccCchhhcCCCchh----hhhccCCcCCCCCCchhhcCcccchhhccCcccccC-----
Q 002085 212 PIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE----ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGE----- 282 (969)
Q Consensus 212 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~----- 282 (969)
|..++.+++|++|++++|++.+..|..|..+.+++ .++++.|.++...+. ......+..+++.+|..+..
T Consensus 166 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~ 244 (635)
T 4g8a_A 166 PEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTC 244 (635)
T ss_dssp CGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHH
T ss_pred chhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchh
Confidence 77888899999999999999888888777665554 467788887744333 33333344444444422110
Q ss_pred -----------------------------------------------------CCCchhhc-ccccccccCccccccCCc
Q 002085 283 -----------------------------------------------------IPSSVEAL-KLTDIDLSMNNLTGSIPE 308 (969)
Q Consensus 283 -----------------------------------------------------~~~~~~~~-~L~~L~Ls~N~l~~~~p~ 308 (969)
.+..+... +++.+++.+|.+... .
T Consensus 245 ~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~ 322 (635)
T 4g8a_A 245 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--K 322 (635)
T ss_dssp HHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--G
T ss_pred hcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--c
Confidence 00111111 355566666666533 2
Q ss_pred cccCcccchhhhhccccCcCcCCccccc---ccccCcccccCCCCCCCCccCcEEEccccccc--CCCCcccccccCCCc
Q 002085 309 EFGKLKNLQLLGLFSNHLSGEVPASIGV---VAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS--GELPTGLWTTFNLSS 383 (969)
Q Consensus 309 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~---l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~ 383 (969)
.+....+|+.|++.+|.+.+..+..+.. +.+..+..+. +.....+++|+.|++++|.+. +..+..+..+.+|+.
T Consensus 323 ~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 401 (635)
T 4g8a_A 323 DFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN-AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKY 401 (635)
T ss_dssp GGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCC-BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCE
T ss_pred ccccchhhhhhhcccccccCcCcccchhhhhcccccccCCC-Ccccccccccccchhhccccccccccccchhhhhhhhh
Confidence 3556678888888888877544433322 2222232222 233456788888888888875 345556666667777
Q ss_pred cccCCCccccccCcc-ccccccEEEeeccccCCCcc-cccCCcccchhhcccCCccccccCccccCccccchhhccCccc
Q 002085 384 LMLSDNTISGELPSK-TAWNLTRLEISNNRFSGQIQ-RGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKL 461 (969)
Q Consensus 384 L~Ls~N~l~~~~~~~-~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 461 (969)
|+++.|.+....+.. ...+|+.++++.|++....+ ..+..+++++.+++++|.+++..+..+..+++|+.|+|++|++
T Consensus 402 L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~ 481 (635)
T 4g8a_A 402 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 481 (635)
T ss_dssp EECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred hhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhccc
Confidence 777777665433322 22456666666555544333 3455556666666666666655555556666666666666653
Q ss_pred -CCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCCCCcc
Q 002085 462 -SGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDE 539 (969)
Q Consensus 462 -~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~ 539 (969)
.+.+|..+..+++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..++.++ |++|||++|+|++.+|..
T Consensus 482 ~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 561 (635)
T 4g8a_A 482 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 561 (635)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSC
T ss_pred ccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHH
Confidence 234455556666666666666666655555666666666666666666655555555553 666666666666655555
Q ss_pred ccc
Q 002085 540 FNN 542 (969)
Q Consensus 540 ~~~ 542 (969)
++.
T Consensus 562 l~~ 564 (635)
T 4g8a_A 562 LQH 564 (635)
T ss_dssp TTC
T ss_pred HHh
Confidence 543
No 39
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.1e-44 Score=395.97 Aligned_cols=202 Identities=25% Similarity=0.398 Sum_probs=172.0
Q ss_pred hhccCCCccceeeecCcEEEEEEEEc---CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcC
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 708 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 708 (969)
.+.+.|++.++||+|+||+||+|++. .+++.||+|++..... ...+.+|+++++.+ +||||+++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----PIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----HHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----HHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 34568999999999999999999874 4578999999855422 35678999999998 699999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
+..|+||||++||+|.+++.. +++.++..++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~~----------------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~ 153 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILNS----------------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRR 153 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHTT----------------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETT
T ss_pred CEEEEEEeCCCcccHHHHHcC----------------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCC
Confidence 999999999999999999842 78899999999999999999998 99999999999999877
Q ss_pred -CcEEEeecccceecccCCC--------------------------CccccccccCcccCchhhcccC-CCCCccchhhH
Q 002085 789 -FKAKIADFGLAKMLAKQGE--------------------------PHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSF 840 (969)
Q Consensus 789 -~~~kl~Dfgla~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwsl 840 (969)
+.+||+|||+|+....... .......+||+.|||||++.+. .++.++||||+
T Consensus 154 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSl 233 (361)
T 4f9c_A 154 LKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233 (361)
T ss_dssp TTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred CCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhh
Confidence 7999999999986543211 0112345799999999999875 58999999999
Q ss_pred HHHHHHHHhCCCCCCCCC
Q 002085 841 GVVLLELVTGKEANYGDE 858 (969)
Q Consensus 841 G~il~elltg~~p~~~~~ 858 (969)
||++|||++|+.||....
T Consensus 234 G~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 234 GVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp HHHHHHHHHTCSSSSCCS
T ss_pred HHHHHHHHHCCCCCCCCC
Confidence 999999999999997654
No 40
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.3e-43 Score=415.95 Aligned_cols=256 Identities=20% Similarity=0.332 Sum_probs=215.8
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
..++++|++.+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+++..
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~ 229 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 229 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEE
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 445688999999999999999999999999999999986543 33356789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC--C
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE--F 789 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--~ 789 (969)
|+|||||+||+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +
T Consensus 230 ~iv~E~~~gg~L~~~i~~~~------------~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~ 294 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADEH------------NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSN 294 (573)
T ss_dssp EEEEECCCCCBHHHHHTCTT------------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCC
T ss_pred EEEEeecCCCcHHHHHHHhC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCC
Confidence 99999999999999997543 2488999999999999999999998 99999999999999864 8
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
.+||+|||+|+.+... ......+||+.|||||++.+..|+.++||||+||++|||++|..||.+.........+...
T Consensus 295 ~vKl~DFG~a~~~~~~---~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~ 371 (573)
T 3uto_A 295 ELKLIDFGLTAHLDPK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 371 (573)
T ss_dssp CEEECCCSSCEECCTT---SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT
T ss_pred CEEEeeccceeEccCC---CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhC
Confidence 9999999999987432 3334568999999999999999999999999999999999999999877655444333211
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
... .....+...+..+.+|+.+||+.||++||++.|+++
T Consensus 372 ---~~~--------~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 372 ---DWN--------MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ---CCC--------CCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CCC--------CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 111122233467889999999999999999999987
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-43 Score=420.94 Aligned_cols=441 Identities=17% Similarity=0.186 Sum_probs=277.4
Q ss_pred EEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCC
Q 002085 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155 (969)
Q Consensus 76 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 155 (969)
+.++++++++++ +|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 788899999886 676554 78999999999999888889999999999999999999888889999999999999999
Q ss_pred CCCCcCCCcccCcccccceecccccccCc-CCcccCCCCCcceeecccCCCCCCCCCCccccccCCC--cEEEccCCcc-
Q 002085 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGT-FPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKL--KTLWMTEANL- 231 (969)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L--~~L~L~~n~l- 231 (969)
+|+ .+|.. .+++|++|+|++|++++. +|..|+++++|++|++++|++.. ..+..+++| +.|++++|.+
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-----~~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-----LDLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-----TTTGGGTTSCEEEEEEEESSCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc-----CchhhhhhceeeEEEeeccccc
Confidence 998 67766 799999999999999863 46889999999999999997532 346666666 9999999998
Q ss_pred -cccCchhhcCCC--chhhhhccCCcCCCCCCc-hhhcCcccchhhccCcc-----cccCCCCchhhcccccccccCccc
Q 002085 232 -IGEIPEAMSNLS--SLEILALNGNHLEGAIPS-GLFLLNNLTQLFLYDNI-----LSGEIPSSVEALKLTDIDLSMNNL 302 (969)
Q Consensus 232 -~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~-----l~~~~~~~~~~~~L~~L~Ls~N~l 302 (969)
.+..|..|..+. .| .+++++|.+.+.++. .+..+++|+.|++++|+ +.+.++......+++.|+++++.+
T Consensus 183 ~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 888888887765 33 457788888776654 34467788888888874 111111111111344444444444
Q ss_pred ccc----CCccccCcccchhhhhccccCcCcCCcccc-----cc---c---cc-CcccccCCC-CCC---CCccCcEEEc
Q 002085 303 TGS----IPEEFGKLKNLQLLGLFSNHLSGEVPASIG-----VV---A---FE-NNLSGAVPK-SLG---NCRTLRTVQL 362 (969)
Q Consensus 303 ~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l---~---~~-n~l~~~~p~-~l~---~l~~L~~L~L 362 (969)
++. ++..+ ..++|++|++++|.++|.+|..+- .+ . .. +.+ .+|. .+. ...+|+.|++
T Consensus 262 ~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l 338 (562)
T 3a79_B 262 TWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSI 338 (562)
T ss_dssp CHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEE
T ss_pred cHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEc
Confidence 321 11111 123666666666666665554320 00 0 00 000 1110 000 1134556666
Q ss_pred ccccccCCCCcccccccCCCccccCCCccccccCccc--cccccEEEeeccccCCC--cccccCCcccchhhcccCCccc
Q 002085 363 YSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFSGQ--IQRGVGSWKNLIVFKASNNLFS 438 (969)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~ 438 (969)
++|.+.... ....+++|++|++++|++++.+|... .++|++|+|++|++++. +|..+..+++|++|++++|.++
T Consensus 339 ~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 339 SDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp ESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred cCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 666554211 01345556666666666665444332 24566666666666642 2344556666666666666666
Q ss_pred cccCc-cccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCc-
Q 002085 439 GEIPV-ELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPE- 516 (969)
Q Consensus 439 ~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~- 516 (969)
+.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|||++|+|+ .+|+.
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~ 492 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGV 492 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTS
T ss_pred CccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHH
Confidence 53333 355556666666666666555554443 45666666666665 45555556666666666666666 45554
Q ss_pred ccccc-ccEEEeecCcCCCCCC
Q 002085 517 IGQLK-LNTFNLSSNKLYGNIP 537 (969)
Q Consensus 517 ~~~l~-L~~l~ls~N~l~~~~p 537 (969)
+..++ |+.|++++|++.+..|
T Consensus 493 ~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 493 FDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTTCTTCCCEECCSCCBCCCHH
T ss_pred HhcCCCCCEEEecCCCcCCCcc
Confidence 55553 6666666666655544
No 42
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.6e-43 Score=385.07 Aligned_cols=293 Identities=27% Similarity=0.464 Sum_probs=275.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC--CCcceeeC----CCeEEEEecCCCCCC--CCCccccCCCcccEE
Q 002085 31 SPNTEERTILLNLKQQLGNPPSLQSWTSTSSPCD--WPEITCTF----NSVTGISLRHKDITQ--KIPPIICDLKNLTTI 102 (969)
Q Consensus 31 ~~~~~~~~all~~k~~~~~~~~l~sw~~~~~~c~--w~gv~C~~----~~v~~l~l~~~~l~~--~~~~~~~~l~~L~~L 102 (969)
.|.++|++||++||+++.++..+++|+.++|||. |.||+|+. ++|+.|+|+++++.+ .+|+.|+++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 4789999999999999987767899998889998 99999975 689999999999999 899999999999999
Q ss_pred EccC-CCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccc
Q 002085 103 DLSS-NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF 181 (969)
Q Consensus 103 ~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 181 (969)
+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..|+++++|++|+|++|++
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 9995 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCcccCCCC-CcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCC
Q 002085 182 NGTFPKEIGDLS-NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIP 260 (969)
Q Consensus 182 ~~~~p~~~~~l~-~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 260 (969)
++.+|..++.++ +|++|++++|++ .+.+|..++.++ |+.|++++|++.+.+|..|..+++|+.|+|++|++++.+|
T Consensus 162 ~~~~p~~l~~l~~~L~~L~L~~N~l--~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 162 SGAIPDSYGSFSKLFTSMTISRNRL--TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp EEECCGGGGCCCTTCCEEECCSSEE--EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cCcCCHHHhhhhhcCcEEECcCCee--eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 999999999998 999999999973 357888999998 9999999999999999999999999999999999997766
Q ss_pred chhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhcccc-CcC
Q 002085 261 SGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNH-LSG 328 (969)
Q Consensus 261 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 328 (969)
. +..+++|++|+|++|++++.+|..+..+ +|+.|+|++|++++.+|.. +.+++|+.+++++|. ++|
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 5 7889999999999999999999998876 7999999999999999986 889999999999998 554
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.9e-43 Score=406.76 Aligned_cols=377 Identities=18% Similarity=0.122 Sum_probs=259.4
Q ss_pred CcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCC-CCCcccCCCCcEEecCCCCCCCcCCCcccCccccccee
Q 002085 97 KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPI-PSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLY 175 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 175 (969)
++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67889999999988877888888999999999988887555 56688888888888888888877788888888888888
Q ss_pred cccccccCcCCcc--cCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchh-hcCCCchhhhhccC
Q 002085 176 LYMNEFNGTFPKE--IGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEA-MSNLSSLEILALNG 252 (969)
Q Consensus 176 L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~ 252 (969)
|++|++++..|.. |+.+++|++|+|++|+ +.+..|.. +.++++|++|+|++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~--------------------------l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNN--------------------------IKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSB--------------------------CCSCCCCGGGGGCTTCCEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCc--------------------------cCccCcccccCCCCcccEEeCCC
Confidence 8888888655544 6777777777777664 33333433 45555555555555
Q ss_pred CcCCCCCCchhhcC--cccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcC
Q 002085 253 NHLEGAIPSGLFLL--NNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEV 330 (969)
Q Consensus 253 N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 330 (969)
|++++..|..+..+ .+|+.|++++|.+.+..+..+.. .....+..+++|+.|++++|++++.+
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~---------------~~~~~~~~~~~L~~L~Ls~n~l~~~~ 228 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW---------------EKCGNPFKNTSITTLDLSGNGFKESM 228 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH---------------HHHCCTTTTCEEEEEECTTSCCCHHH
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccc---------------cccccccccceeeeEecCCCcccccc
Confidence 55555555444433 34555555555554333222110 00011223344444444444444333
Q ss_pred CcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeec
Q 002085 331 PASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISN 410 (969)
Q Consensus 331 p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~ 410 (969)
|..+... ...++|+.|++++|.+.+.... ...+..+.. ..+. .....+|+.|++++
T Consensus 229 ~~~~~~~--------------~~~~~L~~L~l~~~~~~~~~~~-~~~~~~~~~-----~~~~----~~~~~~L~~L~l~~ 284 (455)
T 3v47_A 229 AKRFFDA--------------IAGTKIQSLILSNSYNMGSSFG-HTNFKDPDN-----FTFK----GLEASGVKTCDLSK 284 (455)
T ss_dssp HHHHHHH--------------TTTCCEEEEECTTCTTTSCCTT-CCSSCCCCT-----TTTG----GGTTSCCCEEECCS
T ss_pred hhhhhcc--------------ccccceeeEeeccccccccccc-hhhhccCcc-----cccc----cccccCceEEEecC
Confidence 3222110 0124555666666655432110 000111110 0010 11124788999999
Q ss_pred cccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCC
Q 002085 411 NRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIP 490 (969)
Q Consensus 411 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 490 (969)
|++++.+|..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..|
T Consensus 285 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 364 (455)
T 3v47_A 285 SKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGD 364 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECT
T ss_pred ccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccCh
Confidence 99998888999999999999999999998888899999999999999999987778889999999999999999998889
Q ss_pred cccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCCCCc
Q 002085 491 KAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPD 538 (969)
Q Consensus 491 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 538 (969)
..|..+++|++|+|++|+|++..+..++.++ |++|++++|++++.+|.
T Consensus 365 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 365 QSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 9999999999999999999965555567775 99999999999999884
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.4e-43 Score=401.66 Aligned_cols=396 Identities=23% Similarity=0.282 Sum_probs=263.9
Q ss_pred CCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCC-------------CEEeccCCcCCCCCC
Q 002085 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKL-------------QNLDLSQNYFVGPIP 138 (969)
Q Consensus 72 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p 138 (969)
..+++.++++++++ +.+|++++++++|++|++++|.++|.+|..++++++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 34688899999999 8899999999999999999999999999999998875 999999999885 45
Q ss_pred CCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCcccccc
Q 002085 139 SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218 (969)
Q Consensus 139 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l 218 (969)
.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++. .+| .|+.+
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~---~lp-~~~~l 152 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE---KLP-ELQNS 152 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS---SCC-CCTTC
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC---CCc-ccCCC
Confidence 42 3689999999999996 6754 3789999999999985 3332 268999999999644 366 59999
Q ss_pred CCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhccccccccc
Q 002085 219 KKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLS 298 (969)
Q Consensus 219 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls 298 (969)
++|++|++++|++.+ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|... .+|+.|+++
T Consensus 153 ~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~ 223 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAG 223 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECC
T ss_pred CCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECc
Confidence 999999999998876 56543 588999999999986 56 58889999999999999986 44332 378999999
Q ss_pred CccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccc
Q 002085 299 MNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTT 378 (969)
Q Consensus 299 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 378 (969)
+|+++ .+| .++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. .
T Consensus 224 ~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~------------------l~~~---~~~L~~L~l~~N~l~~-l~~~---~ 276 (454)
T 1jl5_A 224 NNILE-ELP-ELQNLPFLTTIYADNNLLKT------------------LPDL---PPSLEALNVRDNYLTD-LPEL---P 276 (454)
T ss_dssp SSCCS-SCC-CCTTCTTCCEEECCSSCCSS------------------CCSC---CTTCCEEECCSSCCSC-CCCC---C
T ss_pred CCcCC-ccc-ccCCCCCCCEEECCCCcCCc------------------cccc---ccccCEEECCCCcccc-cCcc---c
Confidence 99998 666 48889999999999998873 2221 3678999999999985 5654 3
Q ss_pred cCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCc-ccchhhcccCCccccccCccccCccccchhhcc
Q 002085 379 FNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSW-KNLIVFKASNNLFSGEIPVELTSLSHLNTLLLD 457 (969)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 457 (969)
++|+.|++++|++++. |. ...+|++|++++|++++. + .+ ++|++|++++|++++ +|.. +++|+.|+|+
T Consensus 277 ~~L~~L~ls~N~l~~l-~~-~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~ 345 (454)
T 1jl5_A 277 QSLTFLDVSENIFSGL-SE-LPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIAS 345 (454)
T ss_dssp TTCCEEECCSSCCSEE-SC-CCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CcCCEEECcCCccCcc-cC-cCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECC
Confidence 7889999999998862 21 235789999999988852 2 23 578889999999885 5554 5788899999
Q ss_pred CcccCCCCCcccccccCCCEEEccCccccC--CCCcccccccccceEeccCccccccCCCccccccccEEEeecCcCCC-
Q 002085 458 GNKLSGKLPSQIVSWTSLNNLNLARNELSG--EIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNKLYG- 534 (969)
Q Consensus 458 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~~- 534 (969)
+|+++ .+|. .+++|+.|+|++|++++ .+|.+++.+ +.|++.|.+|..+ -.|++|++++|+++|
T Consensus 346 ~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~~--~~L~~L~ls~N~l~~~ 411 (454)
T 1jl5_A 346 FNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPELP--QNLKQLHVETNPLREF 411 (454)
T ss_dssp SSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---------------------------
T ss_pred CCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhccccccccccc--CcCCEEECCCCcCCcc
Confidence 99988 5666 46789999999999987 677776543 3466666666532 137788888888877
Q ss_pred -CCCcccccccc
Q 002085 535 -NIPDEFNNLAY 545 (969)
Q Consensus 535 -~~p~~~~~~~~ 545 (969)
.+|.+++.+..
T Consensus 412 ~~iP~sl~~L~~ 423 (454)
T 1jl5_A 412 PDIPESVEDLRM 423 (454)
T ss_dssp ------------
T ss_pred ccchhhHhheeC
Confidence 77777766654
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.3e-42 Score=400.40 Aligned_cols=375 Identities=25% Similarity=0.277 Sum_probs=265.7
Q ss_pred cCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCC-------------cEEecCCCCCCCc
Q 002085 94 CDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGL-------------QCIDLGGNNFSGD 160 (969)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L-------------~~L~L~~N~l~~~ 160 (969)
...++|++|++++|++ |.+|++|+++++|++|+|++|.++|.+|..++.+.+| ++|++++|++++
T Consensus 8 ~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~- 85 (454)
T 1jl5_A 8 VSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS- 85 (454)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-
T ss_pred cccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-
Confidence 3568999999999999 7999999999999999999999999999999998875 999999999984
Q ss_pred CCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhc
Q 002085 161 IPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMS 240 (969)
Q Consensus 161 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 240 (969)
+|.. .++|++|++++|++++ +|.. +++|++|++++|++......| ++|++|++++|++.+ +| .|+
T Consensus 86 lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~------~~L~~L~L~~n~l~~-lp-~~~ 150 (454)
T 1jl5_A 86 LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLP------PLLEYLGVSNNQLEK-LP-ELQ 150 (454)
T ss_dssp CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCC------TTCCEEECCSSCCSS-CC-CCT
T ss_pred CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCC------CCCCEEECcCCCCCC-Cc-ccC
Confidence 5552 3689999999999996 6654 478999999999755432222 689999999998886 67 588
Q ss_pred CCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhh
Q 002085 241 NLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLL 319 (969)
Q Consensus 241 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 319 (969)
++++|++|++++|++++ +|..+ .+|++|++++|++++ +|. +..+ +|+.|++++|++++ +|... ++|++|
T Consensus 151 ~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~-~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L 220 (454)
T 1jl5_A 151 NSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPE-LQNLPFLTAIYADNNSLKK-LPDLP---LSLESI 220 (454)
T ss_dssp TCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCC-CTTCTTCCEEECCSSCCSS-CCCCC---TTCCEE
T ss_pred CCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Ccc-ccCCCCCCEEECCCCcCCc-CCCCc---CcccEE
Confidence 99999999999999985 55533 588899999998886 554 4444 78889999998885 44432 578888
Q ss_pred hhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccc
Q 002085 320 GLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT 399 (969)
Q Consensus 320 ~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 399 (969)
++++|+++ .+| .++.+++|++|++++|++++ +|.. ..+|+.|++++|++++ +|..
T Consensus 221 ~l~~n~l~------------------~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~- 275 (454)
T 1jl5_A 221 VAGNNILE------------------ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL- 275 (454)
T ss_dssp ECCSSCCS------------------SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC-
T ss_pred ECcCCcCC------------------ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc-
Confidence 88888887 345 37788999999999999984 5543 3789999999999986 4443
Q ss_pred cccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCc-cccchhhccCcccCCCCCcccccccCCCEE
Q 002085 400 AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSL-SHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 478 (969)
Q Consensus 400 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 478 (969)
..+|++|++++|++++.. .. .++|+.|++++|++++ ++ .+ ++|+.|+|++|++++ +|.. +++|+.|
T Consensus 276 ~~~L~~L~ls~N~l~~l~-~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L 342 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSGLS-EL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERL 342 (454)
T ss_dssp CTTCCEEECCSSCCSEES-CC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred cCcCCEEECcCCccCccc-Cc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEE
Confidence 378999999999998732 11 2678999999999985 22 23 589999999999995 6654 5789999
Q ss_pred EccCccccCCCCcccccccccceEeccCccccc--cCCCccccccccEEEeecCcCCCCCCccccccc
Q 002085 479 NLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG--EIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLA 544 (969)
Q Consensus 479 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~L~~l~ls~N~l~~~~p~~~~~~~ 544 (969)
+|++|+++ .+|. .+++|+.|++++|++++ .+|..++. ++.|++.|.+|..+..+.
T Consensus 343 ~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~-------L~~n~~~~~i~~~~~~L~ 399 (454)
T 1jl5_A 343 IASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED-------LRMNSHLAEVPELPQNLK 399 (454)
T ss_dssp ECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE-------EECCC-------------
T ss_pred ECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh-------hhhcccccccccccCcCC
Confidence 99999998 5777 47899999999999998 77877653 456888888887655544
No 46
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-42 Score=411.11 Aligned_cols=428 Identities=19% Similarity=0.211 Sum_probs=350.8
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.|++++|.+++..|..|+++++|++|+|++|+|++..|+.|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999988889999999999999999999888999999999999999999999 67776 8999999999
Q ss_pred CCCCCCC-cCCCcccCcccccceecccccccCcCCcccCCCCCc--ceeecccCCCCCCCCCCccccccC-CCcEEEccC
Q 002085 153 GGNNFSG-DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNL--EVLGLAYNSNFKPAMIPIEFGMLK-KLKTLWMTE 228 (969)
Q Consensus 153 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~~~~~~~~p~~~~~l~-~L~~L~L~~ 228 (969)
++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|++++|.+......|..+..+. +.-.+++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999996 3568999999999999999999864 45555555 999999998643567788887765 222568888
Q ss_pred CcccccCch-hhcCCCchhhhhccCCc-----CCCCCCchhhcCcccchhhccCcccccCC----CCchhhccccccccc
Q 002085 229 ANLIGEIPE-AMSNLSSLEILALNGNH-----LEGAIPSGLFLLNNLTQLFLYDNILSGEI----PSSVEALKLTDIDLS 298 (969)
Q Consensus 229 n~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~~p~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~~~L~~L~Ls 298 (969)
|.+.+.+++ .+.++++|+.|++++|+ +.+ ....+..+++|+.|+++++.+++.. +......+|++|+++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~ 284 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIY 284 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEe
Confidence 888887765 57788999999999985 222 2345677888888888888776432 122222379999999
Q ss_pred CccccccCCccc-----cCcccchhhhhccccCcCcCCcc----------cccccccCcccccCCCCCCCCccCcEEEcc
Q 002085 299 MNNLTGSIPEEF-----GKLKNLQLLGLFSNHLSGEVPAS----------IGVVAFENNLSGAVPKSLGNCRTLRTVQLY 363 (969)
Q Consensus 299 ~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p~~----------~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~ 363 (969)
+|.++|.+|..+ ..++.|+.+++..|.+ .+|.. +..+.+.++-...++ ....+++|++|+++
T Consensus 285 ~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l~ 361 (562)
T 3a79_B 285 NLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV-CPPSPSSFTFLNFT 361 (562)
T ss_dssp EEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC-CCSSCCCCCEEECC
T ss_pred ccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc-CccCCCCceEEECC
Confidence 999998888877 7788888888888877 45521 233333333221111 12688999999999
Q ss_pred cccccCCCCcccccccCCCccccCCCccccc--cCc--cccccccEEEeeccccCCCcc-cccCCcccchhhcccCCccc
Q 002085 364 SNRFSGELPTGLWTTFNLSSLMLSDNTISGE--LPS--KTAWNLTRLEISNNRFSGQIQ-RGVGSWKNLIVFKASNNLFS 438 (969)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~--~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~ 438 (969)
+|++++.+|..+..+++|+.|+|++|++++. +|. ...++|++|+|++|++++.+| ..+..+++|++|++++|+++
T Consensus 362 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 441 (562)
T 3a79_B 362 QNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441 (562)
T ss_dssp SSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCC
T ss_pred CCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCC
Confidence 9999999999999999999999999999963 232 344789999999999998444 56889999999999999999
Q ss_pred cccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcc-cccccccceEeccCccccccCC
Q 002085 439 GEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKA-IGSLLVMVSLDLSGNQFSGEIP 514 (969)
Q Consensus 439 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~g~~p 514 (969)
+.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. |..+++|+.|+|++|++++..|
T Consensus 442 ~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 442 GSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp GGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 88877664 79999999999999 78888889999999999999999 57766 9999999999999999998655
No 47
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-41 Score=376.91 Aligned_cols=283 Identities=40% Similarity=0.689 Sum_probs=233.9
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|+++++.++||||+++++++.+++..++
T Consensus 28 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 104 (326)
T 3uim_A 28 ASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 104 (326)
T ss_dssp TTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred HhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccC--chHHHHHHHHHHHHHhccCCCccceEEEEecCCceEE
Confidence 4578999999999999999999864 688999999865432 1122368999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++|+|.+++...... ...++|..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||
T Consensus 105 v~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 105 VYPYMANGSVASCLRERPES---------QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp EEECCTTCBHHHHHHCCSTT---------CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EEEeccCCCHHHHHHhcccc---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999875431 245899999999999999999999876779999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCC-----CCCccchHHHHHH
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-----GDEHTSLAEWAWR 868 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~-----~~~~~~~~~~~~~ 868 (969)
+|||+++..... .........||+.|+|||++.+..++.++||||+||++|||++|+.||. .........++.
T Consensus 176 ~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~- 253 (326)
T 3uim_A 176 GDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK- 253 (326)
T ss_dssp CCCSSCEECCSS-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT-
T ss_pred ccCccccccCcc-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH-
Confidence 999999876433 2333445569999999999999999999999999999999999999995 223333444432
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPTENY 930 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 930 (969)
............+.........+.+..+.+++.+||+.||++|||+.|++++|++....+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 315 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSC
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhh
Confidence 23334445566666666677888889999999999999999999999999999987765544
No 48
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.1e-41 Score=367.09 Aligned_cols=253 Identities=23% Similarity=0.305 Sum_probs=211.7
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
+..++|+..+.||+|+||+||+|.+..+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 93 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEE
Confidence 3457899999999999999999999999999999998654322 2466889999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 94 lv~e~~~~~~L~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 156 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET--------------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVK 156 (297)
T ss_dssp EEEECCTTCBHHHHHHHS--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEECCCCCCHHHHHhhc--------------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEE
Confidence 999999999999999753 378899999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
|+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+......
T Consensus 157 l~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 234 (297)
T 3fxz_A 157 LTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234 (297)
T ss_dssp ECCCTTCEECCSTT--CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC
T ss_pred EeeCCCceecCCcc--cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99999998764322 2334567999999999999999999999999999999999999999876543322222111110
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....+...+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 235 ------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ------------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------------CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01112233467889999999999999999999975
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.9e-41 Score=373.13 Aligned_cols=276 Identities=37% Similarity=0.569 Sum_probs=229.1
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
...++|+..+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 35678999999999999999999975 68899999885432 233567999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++|+|.+++..... ....++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 112 lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k 179 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDL---------PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPK 179 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCC---------CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEE
T ss_pred EEEEcCCCCcHHHHHhccCC---------CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEE
Confidence 99999999999999976432 123589999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc---chHHHHHHH
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT---SLAEWAWRH 869 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~---~~~~~~~~~ 869 (969)
|+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ....|....
T Consensus 180 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~ 259 (321)
T 2qkw_B 180 ITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259 (321)
T ss_dssp ECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH
T ss_pred EeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc
Confidence 99999998754433333344556899999999999999999999999999999999999999765433 223332222
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.....+...+++........+.+..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 260 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 260 -HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp -HTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -cccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 2222344455555555667788899999999999999999999999999998875
No 50
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.6e-41 Score=373.06 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=213.8
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
....+|+..+.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 346789999999999999999999999999999999966433 3445678899999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 91 lv~e~~~~~~L~~~l~~~~-------------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHG-------------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp EEECCCTTCBHHHHHHHHC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred EEEECCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEE
Confidence 9999999999999997654 388999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCC-CccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVN-EKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|+|||+++.+... .......||+.|+|||++.+..++ .++||||+||++|||++|+.||.+.+.......+...
T Consensus 155 l~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-- 229 (328)
T 3fe3_A 155 IADFGFSNEFTVG---GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-- 229 (328)
T ss_dssp ECSTTCCGGGSSS---CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--
T ss_pred EeeccCceecCCC---CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--
Confidence 9999999866432 234456799999999999988875 7899999999999999999999876654443332211
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
... .+...+..+.+++.+||+.||++|||+.|+++
T Consensus 230 -~~~------------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 230 -KYR------------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -CCC------------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -CCC------------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 110 11122367889999999999999999999986
No 51
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.6e-41 Score=375.60 Aligned_cols=252 Identities=24% Similarity=0.330 Sum_probs=212.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|+...+|+.||+|++++...........+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 45788999999999999999999999999999999765433333456788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~ 147 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-------------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147 (337)
T ss_dssp EECCTTCBHHHHHHHHS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred EeCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEe
Confidence 99999999999997643 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+.. ...
T Consensus 148 DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~---~~~ 222 (337)
T 1o6l_A 148 DFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM---EEI 222 (337)
T ss_dssp CCTTCBCSCCT--TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCC
T ss_pred eccchhhcccC--CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc---CCC
Confidence 99999864322 2233456799999999999999999999999999999999999999987654433332211 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~ 919 (969)
. .+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 223 ~------------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 R------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp C------------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C------------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1 1122346789999999999999999 8999875
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.8e-41 Score=379.88 Aligned_cols=272 Identities=24% Similarity=0.353 Sum_probs=219.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEc-------CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN-------GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCIS 706 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 706 (969)
.++|+..+.||+|+||.||+|++. .++..||||+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 357889999999999999999874 345689999986542 345567899999999999 8999999999999
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCC---CCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcE
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 783 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Ni 783 (969)
+++..|+||||+++|+|.+++........... .......+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999987643110000 011124589999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccch
Q 002085 784 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 862 (969)
Q Consensus 784 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~ 862 (969)
+++.++.+||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.....+
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999987655433334445567899999999999999999999999999999999 8888877655544
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
...+... .....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 315 ~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 315 FKLLKEG--------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHHHHTT--------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcC--------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3332211 111122234467899999999999999999999999998874
No 53
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.1e-42 Score=387.50 Aligned_cols=256 Identities=21% Similarity=0.260 Sum_probs=210.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..++||+|+||.||+|++..+++.||+|++.+.........+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999654322222234588999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 148 ~E~~~gg~L~~~l~~~--------------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~ 210 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSNY--------------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLA 210 (410)
T ss_dssp ECCCTTEEHHHHHHHC--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EeCCCCCcHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEe
Confidence 9999999999999753 278899999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCC----CCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK----VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
|||+++.....+ ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||.+.+.......+....
T Consensus 211 DFG~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 289 (410)
T 3v8s_A 211 DFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289 (410)
T ss_dssp CCTTCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred ccceeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc
Confidence 999998764321 22234567999999999998765 7889999999999999999999998876555444332211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPs~~evl~ 919 (969)
.. ...+.....+..+.+++.+|+..+|.+ ||++.||++
T Consensus 290 ~~-----------~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 290 NS-----------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HH-----------CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cc-----------ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 00 000111122367889999999999988 999999886
No 54
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.6e-41 Score=367.07 Aligned_cols=266 Identities=27% Similarity=0.383 Sum_probs=216.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
+.++|+..+.||+|+||.||+|++..+++.||+|++...........+.+.+|++++++++||||+++++++.+++..|+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 34679999999999999999999999999999999876655566667889999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 89 v~e~~~g~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl 152 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHG-------------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKI 152 (294)
T ss_dssp EEECCCSCBHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEeCCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEE
Confidence 999999999999997643 389999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++..... .........||+.|+|||.+.+..++.++||||+||++|||++|+.||.+....... .......
T Consensus 153 ~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~---~~~~~~~ 228 (294)
T 4eqm_A 153 FDFGIAKALSET-SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA---IKHIQDS 228 (294)
T ss_dssp CCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH---HHHHSSC
T ss_pred EeCCCccccccc-cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHhhcc
Confidence 999999865432 122233456999999999999999999999999999999999999999776543221 1111111
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcCC
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRRCCP 926 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~ 926 (969)
.+.. .. ......+..+.+++.+||+.||++|| ++.++.+.|+++..
T Consensus 229 ~~~~---~~----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 229 VPNV---TT----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp CCCH---HH----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCCc---ch----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 1100 00 01112336789999999999999998 99999999998864
No 55
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=379.79 Aligned_cols=247 Identities=22% Similarity=0.317 Sum_probs=205.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..++||+|+||.||+|++..+++.||||+++..........+.+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 56899999999999999999999999999999999765443444457788999999988 79999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||++||+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 v~E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL 165 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-------------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKL 165 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEE
Confidence 999999999999998654 389999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++.... .........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+...+...+.. ..
T Consensus 166 ~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~---~~ 240 (353)
T 3txo_A 166 ADFGMCKEGIC--NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN---DE 240 (353)
T ss_dssp CCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC
T ss_pred ccccceeeccc--CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc---CC
Confidence 99999975422 22233456799999999999998999999999999999999999999987765544433322 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
.. .+...+..+.+++.+|++.||++||++
T Consensus 241 ~~------------~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 241 VV------------YPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp CC------------CCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CC------------CCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 10 111233678899999999999999998
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=374.93 Aligned_cols=254 Identities=25% Similarity=0.300 Sum_probs=204.8
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
+.+.++|+..+.||+|+||.||+|++..+|+.||||++...... .....+.+|++++++++||||+++++++.+.+..
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~ 83 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKI 83 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 45678899999999999999999999999999999998654322 2345789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~ 147 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQD-------------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKL 147 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred EEEEeCCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCE
Confidence 99999999999999997654 389999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||++...... .........||+.|+|||++.+..+ +.++||||+||++|||++|..||.+.........+...
T Consensus 148 kL~DFG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~- 225 (347)
T 3zgw_A 148 KLIDFGLCAKPKGN-KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG- 225 (347)
T ss_dssp EECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-
T ss_pred EEEeccCcccccCC-CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-
Confidence 99999998765332 2223345679999999999988775 88999999999999999999999876544433332221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
... .+...+..+.+++.+||+.||++|||+.|+++
T Consensus 226 --~~~------------~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 226 --KYD------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp --CCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCC------------CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 111 11112367789999999999999999999996
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.1e-41 Score=378.25 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=205.5
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..++||+|+||.||+|+...+++.||+|++++.........+.+.+|..++.++ +||||+++++++.+++..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 46799999999999999999999999999999999776554455556788999999887 89999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 131 V~E~~~gg~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL 194 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-------------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKL 194 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEcCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEE
Confidence 999999999999998654 389999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc-----chHHHHHH
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT-----SLAEWAWR 868 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~-----~~~~~~~~ 868 (969)
+|||+++.... .........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..
T Consensus 195 ~DFGla~~~~~--~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~ 272 (396)
T 4dc2_A 195 TDYGMCKEGLR--PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272 (396)
T ss_dssp CCCTTCBCCCC--TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH
T ss_pred eecceeeeccc--CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH
Confidence 99999985322 222344568999999999999999999999999999999999999999753221 11111222
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
...... . ..+...+..+.+++.+||+.||++||++
T Consensus 273 ~i~~~~---------~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 273 VILEKQ---------I--RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHCC---------C--CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHhccc---------c--CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 111111 1 1122234678899999999999999996
No 58
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.2e-41 Score=375.60 Aligned_cols=248 Identities=23% Similarity=0.345 Sum_probs=208.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|++..+|+.||+|+++..........+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 56899999999999999999999999999999999765433333456788899999887 89999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||++||+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 96 v~E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQSCH-------------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp EEECCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEE
Confidence 999999999999998643 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+.. ..
T Consensus 160 ~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~---~~ 234 (345)
T 1xjd_A 160 ADFGMCKENMLG--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM---DN 234 (345)
T ss_dssp CCCTTCBCCCCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC
T ss_pred eEChhhhhcccC--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh---CC
Confidence 999999754322 1223456799999999999999999999999999999999999999987665444333221 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 915 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ 915 (969)
.. .+...+..+.+++.+||+.||++||++.
T Consensus 235 ~~------------~p~~~s~~~~~li~~lL~~dp~~R~~~~ 264 (345)
T 1xjd_A 235 PF------------YPRWLEKEAKDLLVKLFVREPEKRLGVR 264 (345)
T ss_dssp CC------------CCTTSCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred CC------------CCcccCHHHHHHHHHHhcCCHhHcCCCh
Confidence 10 1112236788999999999999999986
No 59
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=365.09 Aligned_cols=260 Identities=23% Similarity=0.429 Sum_probs=212.3
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..++||+|+||+||+|.+..+++.||+|++... +....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 5788899999999999999999999999999988442 3455678999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++++|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMD------------SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp ECCTTCBHHHHHHHCC------------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECC
T ss_pred EecCCCcHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEee
Confidence 9999999999998643 2489999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCc------------cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 796 FGLAKMLAKQGEPH------------TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 796 fgla~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|..|+.........
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 99998764432211 111457999999999999999999999999999999999999988653221110
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ........+... +...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 232 ~--------~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 232 F--------GLNVRGFLDRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp S--------SBCHHHHHHHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H--------hhhhhccccccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 000111111111 1122356889999999999999999999999998885
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.7e-41 Score=374.15 Aligned_cols=259 Identities=20% Similarity=0.259 Sum_probs=213.9
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---HHHHHHHHHHHHHhccccCceeeEEEEEEc
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTIRHANIVKLWCCISS 707 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 707 (969)
...+.+.|+..+.||+|+||.||+|++..+|+.||+|+++....... ...+.+.+|++++++++||||+++++++.+
T Consensus 7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence 34566789999999999999999999999999999999976433211 124678999999999999999999999999
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
+...|+||||++||+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~ 150 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKE-------------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLD 150 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCS-------------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeC
Confidence 999999999999999999997543 388999999999999999999998 9999999999999988
Q ss_pred CC----cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 788 EF----KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 788 ~~----~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
++ .+||+|||+++.+... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.......
T Consensus 151 ~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~ 227 (361)
T 2yab_A 151 KNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227 (361)
T ss_dssp TTSSSCCEEECCCSSCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH
T ss_pred CCCCccCEEEEecCCceEcCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 77 7999999999876432 2234567999999999999999999999999999999999999999876554433
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 864 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..+.. ...... ...+...+..+.+++.+||..||++|||+.|+++
T Consensus 228 ~~i~~---~~~~~~--------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 228 ANITA---VSYDFD--------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHT---TCCCCC--------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHh---cCCCCC--------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 32211 111100 0111122467889999999999999999999985
No 61
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-41 Score=384.37 Aligned_cols=259 Identities=26% Similarity=0.357 Sum_probs=214.0
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|++..+++.||||+++.. ......+.+.+|++++++++||||+++++++.+++..++||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 5788899999999999999999988999999998643 23444567999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 192 e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~D 256 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG------------ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISD 256 (377)
T ss_dssp ECCTTCBHHHHHHHHG------------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EcCCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECc
Confidence 9999999999998643 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.........+. .
T Consensus 257 fG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~----~-- 330 (377)
T 3cbl_A 257 FGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----K-- 330 (377)
T ss_dssp GGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH----T--
T ss_pred CCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----c--
Confidence 999986532211111122345778999999999999999999999999999998 888887655433322221 1
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+...+.+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 331 --------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 331 --------GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp --------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1111223334467899999999999999999999999998874
No 62
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.7e-41 Score=367.84 Aligned_cols=260 Identities=30% Similarity=0.422 Sum_probs=207.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
..+|++.+.||+|+||.||+|++ +|+.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 46788999999999999999987 588899999865432 344567899999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCC--eEecCCCCCcEEECCCCcEE
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ--IIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~k 792 (969)
|||+++|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 113 ~e~~~~~~L~~~l~~~~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~k 179 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGA----------REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVK 179 (309)
T ss_dssp EECCTTCBHHHHHHSTTH----------HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEE
T ss_pred EecCCCCcHHHHHhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEE
Confidence 999999999999986432 13488999999999999999999988 7 99999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
|+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.. .
T Consensus 180 L~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~---~ 254 (309)
T 3p86_A 180 VCDFGLSRLKAST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF---K 254 (309)
T ss_dssp ECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH---S
T ss_pred ECCCCCCcccccc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---c
Confidence 9999999754321 2223446799999999999999999999999999999999999999987654433222211 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. ....+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 255 ~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 255 CK----------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp CC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 11112233467899999999999999999999999998885
No 63
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.7e-41 Score=373.74 Aligned_cols=251 Identities=21% Similarity=0.282 Sum_probs=207.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|++..+++.||+|++...........+.+.+|+++++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 45789999999999999999999999999999999776555556677899999999988 89999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 v~e~~~gg~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL 151 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-------------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKL 151 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEE
Confidence 999999999999997643 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc-----chHHHHHH
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT-----SLAEWAWR 868 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~-----~~~~~~~~ 868 (969)
+|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..
T Consensus 152 ~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (345)
T 3a8x_A 152 TDYGMCKEGLRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229 (345)
T ss_dssp CCGGGCBCSCCT--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH
T ss_pred EeccccccccCC--CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH
Confidence 999999864322 22334567999999999999999999999999999999999999999753211 11111212
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
...... . ..+...+..+.+++.+||+.||++||++
T Consensus 230 ~i~~~~---------~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 230 VILEKQ---------I--RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHCC---------C--CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHcCC---------C--CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111111 1 1122234678899999999999999996
No 64
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=371.58 Aligned_cols=261 Identities=25% Similarity=0.410 Sum_probs=214.4
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCc---EEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
..++|++.+.||+|+||.||+|++..+++ .||||+++... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 35678999999999999999999975544 59999996432 34456789999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.++||||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHD------------GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLV 189 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTT------------TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred cEEEeeCCCCCcHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCC
Confidence 999999999999999997543 2489999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 868 (969)
+||+|||+++.+...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.........+..
T Consensus 190 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~ 269 (325)
T 3kul_A 190 CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269 (325)
T ss_dssp EEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT
T ss_pred EEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc
Confidence 999999999876543222 22334456889999999999999999999999999999999 9999877655443332211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ...+.+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 270 ~--------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 270 G--------------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp T--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C--------------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 111222334478899999999999999999999999999885
No 65
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=366.04 Aligned_cols=249 Identities=25% Similarity=0.338 Sum_probs=209.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|+...+|+.||+|+++..........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46789999999999999999999999999999999664433333456788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~e~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~ 148 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-------------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKIT 148 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-------------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred EeCCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEe
Confidence 99999999999998644 388999999999999999999988 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+.. ...
T Consensus 149 Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~ 220 (318)
T 1fot_A 149 DFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN---AEL 220 (318)
T ss_dssp CCSSCEECSS-----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---CCC
T ss_pred ecCcceecCC-----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCC
Confidence 9999987532 22345799999999999999999999999999999999999999987654433322211 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~ 919 (969)
. .+...+..+.+++.+|++.||++|| ++.|+++
T Consensus 221 ~------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 R------------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp C------------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred C------------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1 1112236788999999999999999 7777764
No 66
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=369.39 Aligned_cols=254 Identities=23% Similarity=0.327 Sum_probs=212.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 56899999999999999999999999999999999765433444457889999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 94 ~e~~~gg~L~~~l~~~~-------------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 157 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-------------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHIT 157 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EecCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEe
Confidence 99999999999998643 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT---TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|||+++.+... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.................
T Consensus 158 DFG~a~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~ 234 (384)
T 4fr4_A 158 DFNIAAMLPRE---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234 (384)
T ss_dssp CCTTCEECCTT---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH
T ss_pred ccceeeeccCC---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh
Confidence 99999876432 23345679999999999874 4589999999999999999999999986655444333222211
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-MKEVLQ 919 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-~~evl~ 919 (969)
... ..+...+..+.+++.+||+.||++||+ +.++.+
T Consensus 235 ~~~------------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 TVV------------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCC------------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ccc------------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111 112223467899999999999999998 666654
No 67
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.2e-40 Score=400.79 Aligned_cols=437 Identities=21% Similarity=0.180 Sum_probs=344.2
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (969)
.+.+-++.+++ .+|..+. +++++|||++|+|++..|.+|.++++|++|||++|+|++..|.+|.+|++|++|+|++|
T Consensus 34 ~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N 110 (635)
T 4g8a_A 34 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 110 (635)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCC
Confidence 45677787888 7786553 57999999999999877889999999999999999999888889999999999999999
Q ss_pred cccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccc-cCchhhcCCCchhhhhccCCcCCCC
Q 002085 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIG-EIPEAMSNLSSLEILALNGNHLEGA 258 (969)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ 258 (969)
+|++..+..|.++++|++|+|++|++. ...+..|+++++|++|+|++|.+.+ .+|..++++++|++|+|++|++++.
T Consensus 111 ~l~~l~~~~f~~L~~L~~L~Ls~N~l~--~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 111 PIQSLALGAFSGLSSLQKLVAVETNLA--SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp CCCEECGGGGTTCTTCCEEECTTSCCC--CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred cCCCCCHHHhcCCCCCCEEECCCCcCC--CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 999888889999999999999999743 4455679999999999999999976 4688999999999999999999988
Q ss_pred CCchhhcCcccc----hhhccCcccccCCCCchhhcccccccccCccccccC-CccccCcc-------------------
Q 002085 259 IPSGLFLLNNLT----QLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSI-PEEFGKLK------------------- 314 (969)
Q Consensus 259 ~p~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~------------------- 314 (969)
.+..+..+.+++ .++++.|.++...+..+....+..+++++|..+..+ +..+..+.
T Consensus 189 ~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 268 (635)
T 4g8a_A 189 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 268 (635)
T ss_dssp CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred ccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccc
Confidence 888888776654 577899999988887777777777777777543211 11122222
Q ss_pred --------------------------------------cchhhhhccccCcCcCC----cccccccccCcccccCCCCCC
Q 002085 315 --------------------------------------NLQLLGLFSNHLSGEVP----ASIGVVAFENNLSGAVPKSLG 352 (969)
Q Consensus 315 --------------------------------------~L~~L~L~~N~l~~~~p----~~~~~l~~~n~l~~~~p~~l~ 352 (969)
+++.+++.+|.+....+ ..+..+...++-.+.++. .
T Consensus 269 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--~ 346 (635)
T 4g8a_A 269 KFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT--L 346 (635)
T ss_dssp CCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCC--C
T ss_pred cccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCc--c
Confidence 22222222222221100 011112222222222222 3
Q ss_pred CCccCcEEEcccccccCCCCcccccccCCCccccCCCcccccc--Ccc--ccccccEEEeeccccCCCcccccCCcccch
Q 002085 353 NCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGEL--PSK--TAWNLTRLEISNNRFSGQIQRGVGSWKNLI 428 (969)
Q Consensus 353 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~--~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 428 (969)
.+..|+.++++.|.+.... ....+++|+.|++++|.+.... +.. ...+|+.|+++.|.+.. .+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-cccccccccccc
Confidence 5678999999999987433 3457899999999999987432 222 23589999999999885 456788899999
Q ss_pred hhcccCCccccccC-ccccCccccchhhccCcccCCCCCcccccccCCCEEEccCcccc-CCCCcccccccccceEeccC
Q 002085 429 VFKASNNLFSGEIP-VELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELS-GEIPKAIGSLLVMVSLDLSG 506 (969)
Q Consensus 429 ~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~ 506 (969)
.++++.|.+....+ ..|..+.+|+.+++++|++++..|..+..+++|+.|+|++|++. +.+|..|..+++|+.|||++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~ 503 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCC
Confidence 99999998876544 56788999999999999999989999999999999999999854 45789999999999999999
Q ss_pred ccccccCCCcccccc-ccEEEeecCcCCCCCCccccccccc
Q 002085 507 NQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIPDEFNNLAYD 546 (969)
Q Consensus 507 N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~ 546 (969)
|+|++..|..++.++ |++|+|++|+|++..|..|..+...
T Consensus 504 N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 544 (635)
T 4g8a_A 504 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTC
T ss_pred CccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCC
Confidence 999998899999995 9999999999999888777766543
No 68
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.7e-40 Score=360.39 Aligned_cols=271 Identities=36% Similarity=0.525 Sum_probs=221.6
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccch-hcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEEe
Q 002085 638 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-LNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYE 716 (969)
Q Consensus 638 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 716 (969)
|...++||+|+||.||+|.. +++.||||++..... ......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 110 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV 110 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence 33448999999999999987 578999999865432 223446789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeec
Q 002085 717 YMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADF 796 (969)
Q Consensus 717 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 796 (969)
|+++++|.+++..... ...++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 111 ~~~~~~L~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 177 (307)
T 2nru_A 111 YMPNGSLLDRLSCLDG----------TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 177 (307)
T ss_dssp CCTTCBHHHHHHTGGG----------CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred ecCCCcHHHHHHhccC----------CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 9999999999975432 23589999999999999999999998 9999999999999999999999999
Q ss_pred ccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh-hccCC
Q 002085 797 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY-AEEKP 875 (969)
Q Consensus 797 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~ 875 (969)
|+++...............||+.|+|||.+.+ .++.++||||||+++|||++|..||...........+.... .....
T Consensus 178 g~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 256 (307)
T 2nru_A 178 GLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 256 (307)
T ss_dssp TTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCC
T ss_pred ccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhh
Confidence 99987654333333445679999999998865 58999999999999999999999998765444333333322 23333
Q ss_pred chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 876 ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+.+.++... ...+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 257 ~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 257 IEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred hhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 444444443 3345677789999999999999999999999999999875
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-40 Score=368.06 Aligned_cols=257 Identities=24% Similarity=0.309 Sum_probs=210.2
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 56789999999999999999999999999999999864432 2234678899999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 83 v~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl 146 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDI-------------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKI 146 (323)
T ss_dssp EEECCTTEEGGGGSBTTT-------------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEcCCCCcHHHHHhhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEE
Confidence 999999999999997543 389999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
+|||+++.+.............||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+. .
T Consensus 147 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~ 223 (323)
T 3tki_A 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---E 223 (323)
T ss_dssp CCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH---T
T ss_pred EEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---c
Confidence 99999987654433334456689999999999988776 7789999999999999999999976554322221111 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
.. .........+..+.+++.+||+.||++|||+.|+++.
T Consensus 224 ~~---------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 224 KK---------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TC---------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cc---------ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11 0111112234678899999999999999999999864
No 70
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.8e-41 Score=371.98 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=207.9
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKL 712 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 712 (969)
..++|+..+.||+|+||.||+|++..+++.||+|+++..........+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 356899999999999999999999988999999999765433334456788999999988 7999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||++||+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 98 lv~E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vk 161 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-------------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIK 161 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EEEeCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEE
Confidence 9999999999999998643 388999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
|+|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+...+.+.+.. .
T Consensus 162 L~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~---~ 236 (353)
T 2i0e_A 162 IADFGMCKENIWD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---H 236 (353)
T ss_dssp ECCCTTCBCCCCT--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---C
T ss_pred EEeCCcccccccC--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh---C
Confidence 9999999854322 2233456799999999999999999999999999999999999999987665444333321 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
... .+...+..+.+++.+||+.||++||++
T Consensus 237 ~~~------------~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 237 NVA------------YPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp CCC------------CCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred CCC------------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 111 112234678999999999999999964
No 71
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7e-41 Score=372.87 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=211.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 46899999999999999999999999999999999665433333456789999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 120 ~e~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~ 183 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-------------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVT 183 (350)
T ss_dssp EECCTTCBHHHHHHHHC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EcCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEc
Confidence 99999999999998643 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|..||.+.........+.. ...
T Consensus 184 DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~---~~~ 255 (350)
T 1rdq_E 184 DFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS---GKV 255 (350)
T ss_dssp CCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCC
T ss_pred ccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc---CCC
Confidence 99999876321 2345799999999999999999999999999999999999999987655443332221 111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-----MKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-----~~evl~ 919 (969)
. .+...+..+.+++.+||+.||++||+ +.|+++
T Consensus 256 ~------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 R------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp C------------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred C------------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0 11223467899999999999999998 777764
No 72
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.7e-41 Score=377.55 Aligned_cols=261 Identities=25% Similarity=0.415 Sum_probs=204.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEc---CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
..++|+..+.||+|+||.||+|++. .++..||||+++... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 3568999999999999999999886 457789999986432 34556789999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.++||||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 185 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKHD------------AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLV 185 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTTT------------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred eEEEEeCCCCCcHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCC
Confidence 999999999999999998643 2489999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 868 (969)
+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...........+..
T Consensus 186 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~ 265 (373)
T 2qol_A 186 CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265 (373)
T ss_dssp EEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT
T ss_pred EEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999876443221 12223346788999999999999999999999999999998 9999877654433332211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ...+.+...+..+.+++.+||+.||++||++.|++++|+++.
T Consensus 266 ~--------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 266 G--------------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp T--------------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C--------------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 1 111122234467899999999999999999999999998874
No 73
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.9e-41 Score=383.47 Aligned_cols=259 Identities=19% Similarity=0.222 Sum_probs=211.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..++||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..++||||+++++++.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 46899999999999999999999999999999999654332222234588999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 153 ~Ey~~gg~L~~~l~~~~------------~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFE------------DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp ECCCTTCBHHHHHHTTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EecCCCCcHHHHHHHcc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEc
Confidence 99999999999998643 2489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
|||+|+..... .........||+.|+|||++. ...++.++||||+||++|||++|+.||.+.+..+....+...
T Consensus 218 DFGla~~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 296 (437)
T 4aw2_A 218 DFGSCLKLMED-GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296 (437)
T ss_dssp CCTTCEECCTT-SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred chhhhhhcccC-CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhc
Confidence 99999876432 222334467999999999987 567899999999999999999999999887655444433221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSS--RPSMKEVLQ 919 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPs~~evl~ 919 (969)
... ... + ......+..+.+++.+|+..+|++ ||++.|+++
T Consensus 297 ~~~-~~~-----p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 297 KER-FQF-----P----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHH-CCC-----C----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccc-ccC-----C----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 100 000 0 001123367889999999998888 999999875
No 74
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=367.49 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=212.0
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
++.++|+..+.||+|+||.||+|.+..+++.||+|++... ......+.+|+++++.++||||+++++++.+.+..+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 77 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELV 77 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEE
Confidence 3567899999999999999999999999999999998543 233467889999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC--CCc
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS--EFK 790 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~--~~~ 790 (969)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 78 lv~e~~~g~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~ 142 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA------------FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSST 142 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCC
T ss_pred EEEEeCCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCC
Confidence 9999999999999997543 2488999999999999999999998 9999999999999997 789
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
+||+|||+++.+... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.........+..
T Consensus 143 ~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~-- 217 (321)
T 1tki_A 143 IKIIEFGQARQLKPG---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN-- 217 (321)
T ss_dssp EEECCCTTCEECCTT---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--
T ss_pred EEEEECCCCeECCCC---CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHc--
Confidence 999999999876432 233446789999999999988899999999999999999999999987655443332221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....... ......+..+.+++.+||..||++|||+.|+++
T Consensus 218 -~~~~~~~--------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 218 -AEYTFDE--------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -TCCCCCH--------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -CCCCCCh--------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111110 011122467899999999999999999999997
No 75
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-40 Score=367.44 Aligned_cols=270 Identities=26% Similarity=0.324 Sum_probs=208.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc----
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS---- 710 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 710 (969)
.++|+..++||+|+||.||+|++. ++.||||++.... .......+|+.++++++||||+++++++.+...
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 357999999999999999999885 7899999985432 223456679999999999999999999987543
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhccc-------CCCCeEecCCCCCcE
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD-------CTPQIIHRDVKSSNI 783 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------~~~~ivH~Dlkp~Ni 783 (969)
.++||||+++|+|.++++.. .++|..++.++.|++.||+|||+. .+++|+||||||+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Ni 162 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN--------------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV 162 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC--------------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGE
T ss_pred EEEEEecCCCCCHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhE
Confidence 69999999999999999753 388999999999999999999965 134899999999999
Q ss_pred EECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccC-----CCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 002085 784 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-----KVNEKIDIYSFGVVLLELVTGKEANYGDE 858 (969)
Q Consensus 784 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~elltg~~p~~~~~ 858 (969)
+++.++.+||+|||+++.+.............||+.|+|||++.+. .++.++|||||||++|||++|+.||.+..
T Consensus 163 ll~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 163 LLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp EECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred EECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 9999999999999999877654444444556799999999998873 45668899999999999999999997653
Q ss_pred ccchHHHHHHHhhccCCch---hhh-----ccCCCC-cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 859 HTSLAEWAWRHYAEEKPIT---DAL-----DKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
......+... ........ +.. .+.... ......+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 243 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 243 DEYMLPFEEE-IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CCCCCTTHHH-HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhccchhhh-hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3211111100 00000000 000 011111 112345677999999999999999999999999998874
No 76
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=367.73 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=212.8
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---HHHHHHHHHHHHHhccccCceeeEEEEEEcC
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTIRHANIVKLWCCISSE 708 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 708 (969)
.++.+.|+..+.||+|+||.||+|.+..+|+.||+|++........ ...+.+.+|++++++++||||+++++++.++
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 4456779999999999999999999999999999999865432211 1246789999999999999999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
...++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~ 150 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEKE-------------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDR 150 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTSS-------------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCS
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC-------------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecC
Confidence 99999999999999999997543 388999999999999999999998 99999999999999988
Q ss_pred C----cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 789 F----KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 789 ~----~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
+ .+||+|||+++.+... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+........
T Consensus 151 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 227 (326)
T 2y0a_A 151 NVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227 (326)
T ss_dssp SSSSCCEEECCCTTCEECCTT---SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred CCCCCCEEEEECCCCeECCCC---CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH
Confidence 7 7999999999876432 22334679999999999999999999999999999999999999998765443332
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+... ...... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~~---~~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 228 NVSAV---NYEFED--------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHT---CCCCCH--------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhc---CCCcCc--------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22111 111110 111122367889999999999999999999987
No 77
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=378.80 Aligned_cols=258 Identities=21% Similarity=0.270 Sum_probs=214.2
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
..+.++|+..+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+++++.++||||+++++++.+++..
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 4566789999999999999999999999999999999865443 334467899999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC---CC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD---SE 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~ 788 (969)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .+
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~-------------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~ 149 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVARE-------------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKG 149 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTT
T ss_pred EEEEEeCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCC
Confidence 99999999999999998654 388999999999999999999998 999999999999998 45
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+.+||+|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|..||.+.+.......+..
T Consensus 150 ~~vkL~DFG~a~~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 227 (444)
T 3soa_A 150 AAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA 227 (444)
T ss_dssp CCEEECCCSSCBCCCTT--CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred CcEEEccCceeEEecCC--CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence 78999999999866432 2233456799999999999999999999999999999999999999987765444433322
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.... ...+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~-----------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 228 GAYD-----------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TCCC-----------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC-----------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1110 011111223467899999999999999999999987
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-40 Score=371.05 Aligned_cols=257 Identities=22% Similarity=0.297 Sum_probs=213.7
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
.+.++|+..+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+++..|
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 345689999999999999999999999999999999965433 3444578999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC---
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF--- 789 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~--- 789 (969)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 105 lv~e~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVARE-------------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 168 (362)
T ss_dssp EEECCCCSCBHHHHHTTCS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTC
T ss_pred EEEecCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCC
Confidence 9999999999999997543 388999999999999999999998 999999999999998654
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
.+||+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.+.......+...
T Consensus 169 ~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~ 245 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 245 (362)
T ss_dssp CEEECCCTTCBCCTTC---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred CEEEeecCcceEecCC---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence 5999999999876432 2234467999999999999999999999999999999999999999876654443333221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
.. . ...+.....+..+.+++.+||+.||++||++.|+++.
T Consensus 246 ~~---~--------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 246 AY---D--------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CC---C--------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CC---C--------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10 0 0111122334678999999999999999999999863
No 79
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=359.88 Aligned_cols=273 Identities=20% Similarity=0.235 Sum_probs=216.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC--ceE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--SKL 712 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 712 (969)
-++|+..++||+|+||+||+|++..+++.||||++...... ...+.+.+|++++++++||||+++++++.+.. ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 35789999999999999999999999999999999654322 22467789999999999999999999998755 779
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE----CCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL----DSE 788 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~ 788 (969)
+||||+++++|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~----------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 152 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSN----------AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQ 152 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGG----------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSC
T ss_pred EEEeCCCCCCHHHHHHHhcc----------ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCC
Confidence 99999999999999986543 13389999999999999999999998 99999999999999 788
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcc--------cCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY--------TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 860 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslG~il~elltg~~p~~~~~~~ 860 (969)
+.+||+|||+++.+... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 153 ~~~kL~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 153 SVYKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp EEEEECCCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred ceEEEccCCCceecCCC---CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 88999999999876432 2233457999999999886 578899999999999999999999999754432
Q ss_pred chHHHHHHHhhccCCch--hhh------------ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 861 SLAEWAWRHYAEEKPIT--DAL------------DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 861 ~~~~~~~~~~~~~~~~~--~~~------------~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..............+.. ... ...............+.+++.+||+.||++|||++|+++......
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 22222222222111100 000 001112334667788999999999999999999999999887664
No 80
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.9e-40 Score=381.22 Aligned_cols=362 Identities=19% Similarity=0.178 Sum_probs=267.9
Q ss_pred CCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccC
Q 002085 88 KIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGR 167 (969)
Q Consensus 88 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 167 (969)
..+..++++++|++|+|++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|+|++|++++. | +++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 3344566777777777777777753 4 577777777777777777753 3 77777777777777777753 3 777
Q ss_pred cccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhh
Q 002085 168 LSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEI 247 (969)
Q Consensus 168 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 247 (969)
+++|++|+|++|++++ +| ++.+++|++|++++|++.. + .++.+++|++|++++|+..+.+ .+..+++|++
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~---l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 174 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE---I--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTT 174 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC---C--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce---e--ccccCCcCCEEECCCCCccccc--ccccCCcCCE
Confidence 7777777777777775 33 7777777777777776443 2 2677777777777777666666 3777788888
Q ss_pred hhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccC
Q 002085 248 LALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHL 326 (969)
Q Consensus 248 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 326 (969)
|++++|++++ +| +..+++|+.|++++|++++. + +... +|+.|++++|++++ +| ++.+++|+.|++++|++
T Consensus 175 L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp EECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred EECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 8888888886 34 67778888888888888764 1 3333 67888888888886 45 77788888888888888
Q ss_pred cCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEE
Q 002085 327 SGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRL 406 (969)
Q Consensus 327 ~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L 406 (969)
++. | ++.+++|+.|++++|+ |+.|++++|.+.+.+|....++|+.|
T Consensus 246 ~~~------------------~--~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~~~~l~~L~~L 291 (457)
T 3bz5_A 246 TEL------------------D--VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQAEGCRKIKEL 291 (457)
T ss_dssp SCC------------------C--CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEECTTCTTCCCC
T ss_pred CCc------------------C--HHHCCCCCEEeccCCC--------------CCEEECCCCccCCcccccccccCCEE
Confidence 742 1 3456677778777663 45678888888877776666788888
Q ss_pred EeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCcccc
Q 002085 407 EISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELS 486 (969)
Q Consensus 407 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 486 (969)
+|++|.+.+.+|. ...+|+.|++++| ++|+.|+|++|+|++ ++ +..+++|+.|++++|+|+
T Consensus 292 ~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 292 DVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp CCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCC
T ss_pred ECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCC
Confidence 8888887777774 3455666666554 689999999999997 43 889999999999999998
Q ss_pred CCCCcccccccccceEeccCccccccCCCccccc-cccEEEeecCcCCCCCCccccc
Q 002085 487 GEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-KLNTFNLSSNKLYGNIPDEFNN 542 (969)
Q Consensus 487 ~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~~~~p~~~~~ 542 (969)
+ ++.|..|++++|.++|. +.+ .+..+++++|+++|.||..+..
T Consensus 353 ~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 353 D--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp B--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred C--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 6 35677889999999986 244 4888999999999999976543
No 81
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.3e-40 Score=384.86 Aligned_cols=376 Identities=17% Similarity=0.189 Sum_probs=280.4
Q ss_pred CCCCCCc--ceeeC----------CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCC-CcccCCCCCCCEEe
Q 002085 61 SPCDWPE--ITCTF----------NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEF-PEFLYNCTKLQNLD 127 (969)
Q Consensus 61 ~~c~w~g--v~C~~----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~ 127 (969)
+.|.|.+ |.|+. .+++.|+|+++.+.+..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3455555 77754 35899999999999988999999999999999999998666 56799999999999
Q ss_pred ccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCc--ccCcccccceecccccccCcCCcc-cCCCCCcceeecccCC
Q 002085 128 LSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRS--IGRLSELQTLYLYMNEFNGTFPKE-IGDLSNLEVLGLAYNS 204 (969)
Q Consensus 128 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~ 204 (969)
|++|++++..|..|+++++|++|+|++|++++.+|.. |+.+++|++|+|++|++++..|.. ++++++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999865554 999999999999999999887876 7888888888888875
Q ss_pred CCCCCCCCccccccCCCcEEEccCCcccccCchhhcCC--CchhhhhccCCcCCCCCCch--------hhcCcccchhhc
Q 002085 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNL--SSLEILALNGNHLEGAIPSG--------LFLLNNLTQLFL 274 (969)
Q Consensus 205 ~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~--------l~~l~~L~~L~L 274 (969)
+.+..|..+..+ .+|+.|++++|.+++..+.. +..+++|++|++
T Consensus 166 --------------------------l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~L 219 (455)
T 3v47_A 166 --------------------------VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDL 219 (455)
T ss_dssp --------------------------BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEEC
T ss_pred --------------------------ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEec
Confidence 333344444433 45666666666666433322 223455555555
Q ss_pred cCcccccCCCCchhh----cccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCC
Q 002085 275 YDNILSGEIPSSVEA----LKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKS 350 (969)
Q Consensus 275 ~~N~l~~~~~~~~~~----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~ 350 (969)
++|++++..|..+.. .+|+.|++++|.+.+... ..+.+.+ ..+..
T Consensus 220 s~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~-----------------~~~~~ 268 (455)
T 3v47_A 220 SGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKD-----------------PDNFT 268 (455)
T ss_dssp TTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCC-----------------CCTTT
T ss_pred CCCcccccchhhhhccccccceeeEeecccccccccc--------------chhhhcc-----------------Ccccc
Confidence 555555544444332 235555555554432210 0111111 11111
Q ss_pred CC--CCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccch
Q 002085 351 LG--NCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLI 428 (969)
Q Consensus 351 l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 428 (969)
+. ..++|+.|++++|++++..|..+..+++|+ +|+|++|++++..|..|.++++|+
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~----------------------~L~Ls~n~l~~~~~~~~~~l~~L~ 326 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLE----------------------QLTLAQNEINKIDDNAFWGLTHLL 326 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCC----------------------EEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCC----------------------EEECCCCcccccChhHhcCcccCC
Confidence 21 235677777777777766666666555544 455555555556677788888999
Q ss_pred hhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcc
Q 002085 429 VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQ 508 (969)
Q Consensus 429 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 508 (969)
+|++++|.+++..|..|..+++|+.|+|++|++++..|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 406 (455)
T 3v47_A 327 KLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 406 (455)
T ss_dssp EEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCC
Confidence 99999999988888899999999999999999998889999999999999999999997666778999999999999999
Q ss_pred ccccCCC
Q 002085 509 FSGEIPP 515 (969)
Q Consensus 509 l~g~~p~ 515 (969)
+++.+|.
T Consensus 407 l~~~~~~ 413 (455)
T 3v47_A 407 WDCSCPR 413 (455)
T ss_dssp BCCCTTT
T ss_pred cccCCCc
Confidence 9988773
No 82
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.9e-41 Score=374.17 Aligned_cols=256 Identities=24% Similarity=0.310 Sum_probs=202.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHH-HhccccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|++..+++.||+|++.+...........+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 4678999999999999999999999999999999976654444555677778877 567899999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||++||+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 117 v~E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL 180 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-------------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVL 180 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEeCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEE
Confidence 999999999999998643 388899999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|..||.+.+.......+.. ..
T Consensus 181 ~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~---~~ 255 (373)
T 2r5t_A 181 TDFGLCKENIEH--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN---KP 255 (373)
T ss_dssp CCCCBCGGGBCC--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH---SC
T ss_pred eeCccccccccC--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh---cc
Confidence 999999864322 2233456799999999999999999999999999999999999999987655443333221 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 923 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~ 923 (969)
.. .+...+..+.+++.+||+.||++||++.+.++.+.+
T Consensus 256 ~~------------~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~ 293 (373)
T 2r5t_A 256 LQ------------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293 (373)
T ss_dssp CC------------CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHT
T ss_pred cC------------CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhC
Confidence 10 111223678899999999999999998655444433
No 83
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2e-40 Score=386.71 Aligned_cols=257 Identities=23% Similarity=0.296 Sum_probs=212.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..++||+|+||.||+|++..+|+.||||++.............+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 35688899999999999999999999999999999665433333456788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 263 mEy~~gg~L~~~l~~~~~-----------~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~ 328 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ-----------AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRIS 328 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred EEcCCCCcHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEE
Confidence 999999999999986542 3489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+++.+... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+........
T Consensus 329 DFGla~~~~~~---~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~ 405 (576)
T 2acx_A 329 DLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405 (576)
T ss_dssp CCTTCEECCTT---CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC
T ss_pred ecccceecccC---ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc
Confidence 99999876432 223345899999999999999999999999999999999999999987654332222222222111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~ 919 (969)
. ..+...+..+.+++.+||+.||++|| +++|+++
T Consensus 406 ~-----------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 E-----------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp C-----------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred c-----------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0 11122346789999999999999999 6777764
No 84
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-40 Score=368.73 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=206.3
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcE----EEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
++|+..++||+|+||+||+|++..+++. ||+|.+.... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 5788999999999999999998777765 4777664322 2334578999999999999999999999998754 7
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~ 156 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp EEEEECCTTCBHHHHHHHST------------TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEE
T ss_pred EEEEEecCCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCE
Confidence 89999999999999998754 2488999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.........+..
T Consensus 157 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-- 234 (327)
T 3poz_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-- 234 (327)
T ss_dssp EECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--
T ss_pred EEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc--
Confidence 9999999987755444444445567889999999999999999999999999999999 9999987665544333221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
....+.+...+..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 235 ------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 235 ------------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ------------TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ------------CCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11112223344678999999999999999999999999988753
No 85
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-41 Score=375.87 Aligned_cols=266 Identities=24% Similarity=0.333 Sum_probs=216.2
Q ss_pred ccCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
.++|+..+.||+|+||.||+|++ ..+++.||||+++... .......+.+|+.++++++||||+++++++.++.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 45788999999999999999994 4467789999985432 3444567899999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..++||||+++|+|.+++....... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRP------SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCS------SSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred CCEEEEEeCCCCCHHHHHHhhcccc------CccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 9999999999999999998754311 1123589999999999999999999998 999999999999999655
Q ss_pred ---cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHH
Q 002085 790 ---KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 865 (969)
Q Consensus 790 ---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~ 865 (969)
.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++ |..||.+.........
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~ 298 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 298 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 599999999986654444444445678999999999999999999999999999999998 8888877655443332
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 866 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+... . ....+...+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 299 i~~~----~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 299 VTSG----G----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHTT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcC----C----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 2111 1 11112233467899999999999999999999999998885
No 86
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=377.49 Aligned_cols=258 Identities=20% Similarity=0.191 Sum_probs=209.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..++||+|+||.||+|+...+|+.||+|++.+.........+.+.+|.+++..++||||+++++++.+++..|+|
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 46899999999999999999999999999999999654332233345688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 140 mE~~~gg~L~~~l~~~~------------~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKFG------------ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECCCCSCBHHHHHHHHS------------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EcCCCCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 99999999999998643 2488999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcc-------cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-------TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
|||+++...... ........||+.|+|||++. +..++.++||||+||++|||++|+.||.+.+.......+.
T Consensus 205 DFGla~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 283 (412)
T 2vd5_A 205 DFGSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283 (412)
T ss_dssp CCTTCEECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred echhheeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999998764322 22233467999999999987 3568999999999999999999999998876554433332
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR---PSMKEVLQ 919 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R---Ps~~evl~ 919 (969)
..... ... + ......+..+.+++.+||. +|++| |++.|+++
T Consensus 284 ~~~~~-~~~-----p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 284 HYKEH-LSL-----P----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp THHHH-CCC-----C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred hcccC-cCC-----C----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 11100 000 0 0011233678999999999 99998 58888865
No 87
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.2e-40 Score=361.91 Aligned_cols=268 Identities=26% Similarity=0.359 Sum_probs=208.4
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
...+.++|+..+.||+|+||.||+|++..+++.||||++.............+.+|++++++++||||+++++++.....
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 86 (311)
T ss_dssp CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET
T ss_pred cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC
Confidence 34456789999999999999999999998999999999977655556667889999999999999999999999876544
Q ss_pred e----EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 711 K----LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 711 ~----~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
. |+||||+++++|.++++... .+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~ 150 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEG-------------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMIS 150 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE
T ss_pred CCcccEEEEecCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEc
Confidence 3 99999999999999997643 388999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+........
T Consensus 151 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~- 229 (311)
T 3ork_A 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY- 229 (311)
T ss_dssp TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-
T ss_pred CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-
Confidence 9999999999999876543222 22334568999999999999999999999999999999999999998765433222
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHHhhcC
Q 002085 866 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL-QILRRCC 925 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl-~~L~~~~ 925 (969)
............. ....+..+.+++.+||+.||++||++.+++ +.+.+..
T Consensus 230 --~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 230 --QHVREDPIPPSAR--------HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp --HHHHCCCCCHHHH--------STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --HHhcCCCCCcccc--------cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 2222211111111 111236788999999999999999666554 5555553
No 88
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.4e-40 Score=367.99 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=209.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcE----EEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEF----VAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
++|+..++||+|+||.||+|.+..+++. ||+|.+.... .....+.+.+|+.++++++||||+++++++. ++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 5788999999999999999999877765 7777764322 1222356778999999999999999999986 5678
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR------------GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG------------GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCE
T ss_pred EEEEEeCCCCCHHHHHHHcc------------ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeE
Confidence 99999999999999998653 2488999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.........+....
T Consensus 155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 234 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 234 (325)
T ss_dssp EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC
T ss_pred EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC
Confidence 9999999988755444444455678889999999999999999999999999999999 999998766554443332111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
....+...+..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 235 --------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 235 --------------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp --------------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred --------------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 011111223467889999999999999999999999998864
No 89
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.8e-41 Score=368.94 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=207.8
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
...+|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+++++.++||||+++++++.+++..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35689999999999999999999999999999999865433222334678999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 87 v~E~~-~g~l~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl 149 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK-------------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKI 149 (336)
T ss_dssp EECCC-CEEHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEE
T ss_pred EEECC-CCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEE
Confidence 99999 689999987644 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
+|||++...... .......||+.|+|||++.+..+ ++++||||+||++|||++|+.||.+........
T Consensus 150 ~DFG~s~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------- 218 (336)
T 3h4j_B 150 ADFGLSNIMTDG---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------- 218 (336)
T ss_dssp CCSSCTBTTTTS---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC--------
T ss_pred EEeccceeccCC---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH--------
Confidence 999999865332 23345679999999999988776 689999999999999999999997654322111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
...... ...+...+..+.+++.+||+.||.+|||++|+++
T Consensus 219 ------~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 219 ------KVNSCV-YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ------CCCSSC-CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ------HHHcCC-CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000000 0112223467889999999999999999999986
No 90
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-40 Score=386.11 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=209.5
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|...++||+|+||.||+|++..+|+.||+|++...........+.+.+|++++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 35788899999999999999999999999999999665433333456789999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++||+|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.+|.+||+
T Consensus 264 mE~~~gg~L~~~l~~~~~---------~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~ 331 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE---------DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRIS 331 (543)
T ss_dssp ECCCTTCBHHHHHHTSST---------TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred EEeccCCCHHHHHHHhhc---------ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEe
Confidence 999999999999976532 123589999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||+++.+.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+........
T Consensus 332 DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~ 409 (543)
T 3c4z_A 332 DLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409 (543)
T ss_dssp CCTTCEECCTTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC
T ss_pred ecceeeeccCCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc
Confidence 999998764322 122345899999999999999999999999999999999999999987643322222222221111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
. ..+...+..+.+++.+||+.||++||++
T Consensus 410 ~-----------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 410 V-----------TYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp C-----------CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred c-----------CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 0 1122234678899999999999999975
No 91
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-39 Score=359.63 Aligned_cols=248 Identities=21% Similarity=0.327 Sum_probs=206.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEEee
Q 002085 638 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEY 717 (969)
Q Consensus 638 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 717 (969)
|...++||+|+||.||+|+...+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 5566789999999999999998999999999864332 2246788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeecc
Q 002085 718 MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFG 797 (969)
Q Consensus 718 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 797 (969)
+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 124 ~~~~~L~~~l~~~--------------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 186 (321)
T 2c30_A 124 LQGGALTDIVSQV--------------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFG 186 (321)
T ss_dssp CCSCBHHHHHTTC--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred CCCCCHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeee
Confidence 9999999998742 388999999999999999999998 99999999999999999999999999
Q ss_pred cceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCch
Q 002085 798 LAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPIT 877 (969)
Q Consensus 798 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 877 (969)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.... .
T Consensus 187 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~---~--- 258 (321)
T 2c30_A 187 FCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---P--- 258 (321)
T ss_dssp TCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS---C---
T ss_pred eeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---C---
Confidence 998764322 22345679999999999999999999999999999999999999998765443332221110 0
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 878 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
+.. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 259 ----~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 259 ----PKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ----CCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----CCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 011123367889999999999999999999987
No 92
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-40 Score=371.94 Aligned_cols=273 Identities=23% Similarity=0.349 Sum_probs=216.2
Q ss_pred ccCCCccceeeecCcEEEEEEE-----EcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcC
Q 002085 635 LSSLTESNLIGSGGSGQVYRID-----INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 708 (969)
.++|+..+.||+|+||.||+|+ ...+++.||||+++... .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 4679999999999999999998 45567899999996542 334457899999999999 799999999999875
Q ss_pred C-ceEEEEeeccCCCHHHHhccCcCcccc---------------------------------------------------
Q 002085 709 N-SKLLVYEYMENQSLDRWLHGRKRSLVS--------------------------------------------------- 736 (969)
Q Consensus 709 ~-~~~lv~e~~~~gsL~~~l~~~~~~~~~--------------------------------------------------- 736 (969)
+ ..++||||+++|+|.++++.......+
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 5 489999999999999999876431100
Q ss_pred --CCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCCcccccc
Q 002085 737 --GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAV 814 (969)
Q Consensus 737 --~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 814 (969)
.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+............
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 00111123489999999999999999999998 9999999999999999999999999999876554444445566
Q ss_pred ccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHH
Q 002085 815 AGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEM 893 (969)
Q Consensus 815 ~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (969)
.||+.|+|||++.+..++.++|||||||++|||++ |..||.+.......... ..... ....+...+
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~---~~~~~----------~~~~~~~~~ 322 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR---LKEGT----------RMRAPDYTT 322 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH---HHHTC----------CCCCCTTCC
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH---HHcCC----------CCCCCCCCC
Confidence 78999999999999999999999999999999998 99998765543222111 11111 111122233
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 894 TTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 894 ~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..+.+++.+||+.||++||++.|++++|+++.
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 67899999999999999999999999998874
No 93
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.9e-39 Score=355.58 Aligned_cols=262 Identities=27% Similarity=0.378 Sum_probs=205.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..++||+|+||.||+|++. ..+|+|+++... ......+.+.+|++++++++||||+++++++. .+..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 468999999999999999999874 358999886533 23455678999999999999999999999875 4568999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 110 ~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 174 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQE------------TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIG 174 (307)
T ss_dssp EECCSSCBHHHHHHTSC------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEEC
T ss_pred EecCCCCcHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEc
Confidence 99999999999997543 3489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|||+++...............||+.|+|||++. +..++.++|||||||++|||++|+.||.................
T Consensus 175 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 254 (307)
T 3lb7_A 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY 254 (307)
T ss_dssp CCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTC
T ss_pred cCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCC
Confidence 999998654433334445567999999999986 56788999999999999999999999976554332222211111
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..... .......+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 255 ~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 255 ASPDL---------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCCCS---------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCcch---------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 11110 0111223467899999999999999999999999998775
No 94
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=369.33 Aligned_cols=273 Identities=26% Similarity=0.434 Sum_probs=217.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
.++|+..+.||+|+||.||+|++. .+++.||||+++... .....+.+.+|++++++++||||+++++++.+++
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 467899999999999999999986 345899999986543 3445678999999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccC-----------CCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSG-----------SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 778 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~-----------~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 778 (969)
..++||||+++|+|.+++.......... ........+++..++.++.|++.||+|||+. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 9999999999999999998753211000 0000124689999999999999999999998 9999999
Q ss_pred CCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCC
Q 002085 779 KSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGD 857 (969)
Q Consensus 779 kp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~ 857 (969)
||+||+++.++.+||+|||+++.+.............+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999987644333333445678999999999999999999999999999999999 88898776
Q ss_pred CccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 858 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
........+. ... ....+...+..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 281 ~~~~~~~~~~----~~~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 281 AHEEVIYYVR----DGN----------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp CHHHHHHHHH----TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ChHHHHHHHh----CCC----------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 5443332221 111 011122334678999999999999999999999999999863
No 95
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.1e-40 Score=352.05 Aligned_cols=258 Identities=23% Similarity=0.330 Sum_probs=212.5
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++. ++..||+|++...... .+.+.+|++++++++||||+++++++.+++..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 357889999999999999999886 5678999998654321 35688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 82 ~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 146 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHG------------KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVS 146 (268)
T ss_dssp EECCTTCBHHHHHHHHG------------GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEEC
T ss_pred EEccCCCcHHHHHHHcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEc
Confidence 99999999999997643 2489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...........+. ..
T Consensus 147 Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~----~~ 221 (268)
T 3sxs_A 147 DFGMTRYVLDD-QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS----QG 221 (268)
T ss_dssp CTTCEEECCTT-CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH----TT
T ss_pred cCccceecchh-hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH----cC
Confidence 99999876432 2223334557788999999999899999999999999999999 888987655433222211 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 927 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 927 (969)
. ....+...+..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 222 ~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 222 H----------RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp C----------CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred C----------CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 1 0111112236789999999999999999999999999999754
No 96
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-40 Score=368.33 Aligned_cols=259 Identities=20% Similarity=0.263 Sum_probs=213.7
Q ss_pred chhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 630 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 630 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
....+.+.|++.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+
T Consensus 45 ~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~ 121 (387)
T 1kob_A 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY 121 (387)
T ss_dssp BCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred cCCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC
Confidence 33456678999999999999999999999999999999986543 233467899999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC--
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-- 787 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~-- 787 (969)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~ 186 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAAED------------YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKK 186 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTCTT------------CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTT
T ss_pred EEEEEEEcCCCCcHHHHHHhhc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCC
Confidence 9999999999999999997543 2488999999999999999999998 9999999999999974
Q ss_pred CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 788 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
++.+||+|||+++.+... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.+.......+.
T Consensus 187 ~~~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 263 (387)
T 1kob_A 187 ASSVKIIDFGLATKLNPD---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK 263 (387)
T ss_dssp CCCEEECCCTTCEECCTT---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred CCceEEEecccceecCCC---cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 467999999999876432 22334579999999999999999999999999999999999999998765443333221
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
. .... .........+..+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~---~~~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 264 R---CDWE--------FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp H---CCCC--------CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred h---CCCC--------CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1 1111 0111112234678999999999999999999999873
No 97
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.2e-40 Score=358.06 Aligned_cols=261 Identities=28% Similarity=0.363 Sum_probs=202.9
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhc--cccCceeeEEEEEEc----
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT--IRHANIVKLWCCISS---- 707 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~---- 707 (969)
+.++|+..+.||+|+||+||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~ 77 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSRHS 77 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETT
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCC
Confidence 456899999999999999999988 58899999985432 2455667777666 799999999998654
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhc--------ccCCCCeEecCCC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH--------HDCTPQIIHRDVK 779 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlk 779 (969)
....++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+|||||
T Consensus 78 ~~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlk 140 (301)
T 3q4u_A 78 STQLWLITHYHEMGSLYDYLQLT--------------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLK 140 (301)
T ss_dssp EEEEEEEECCCTTCBHHHHHTTC--------------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCC
T ss_pred CceeEEehhhccCCCHHHHHhhc--------------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCC
Confidence 34579999999999999999643 3889999999999999999999 66 99999999
Q ss_pred CCcEEECCCCcEEEeecccceecccCCCCcc--ccccccCcccCchhhcccC------CCCCccchhhHHHHHHHHHhC-
Q 002085 780 SSNILLDSEFKAKIADFGLAKMLAKQGEPHT--MSAVAGSFGYFAPEYAYTT------KVNEKIDIYSFGVVLLELVTG- 850 (969)
Q Consensus 780 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg- 850 (969)
|+||+++.++.+||+|||+++.......... .....||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 141 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~ 220 (301)
T 3q4u_A 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220 (301)
T ss_dssp GGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred hHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhh
Confidence 9999999999999999999987654322211 2334799999999999876 455789999999999999999
Q ss_pred ---------CCCCCCCCccc-hHHHHHHHhhccCCchhhhccCCC-CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 851 ---------KEANYGDEHTS-LAEWAWRHYAEEKPITDALDKGIA-EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 851 ---------~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
+.||....... ............... +... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 221 ~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 221 VSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR-----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC-----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred cCccccccccccccccCCCCcchhhhhHHHhccCCC-----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 77876543221 111121211111110 1111 1123346688999999999999999999999999
Q ss_pred HHhhc
Q 002085 920 ILRRC 924 (969)
Q Consensus 920 ~L~~~ 924 (969)
.|+++
T Consensus 296 ~L~~i 300 (301)
T 3q4u_A 296 TLTKI 300 (301)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 99875
No 98
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.9e-40 Score=359.00 Aligned_cols=270 Identities=25% Similarity=0.338 Sum_probs=210.5
Q ss_pred chhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 630 TESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 630 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
..+.+.++|+..++||+|+||+||+|++. +|+.||+|++..... .....+.+.+|++++++++||||+++++++.+++
T Consensus 15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 92 (311)
T 3niz_A 15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER 92 (311)
T ss_dssp CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS
T ss_pred eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC
Confidence 34456789999999999999999999986 589999999865432 2334567889999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..++||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 93 ~~~lv~e~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~ 156 (311)
T 3niz_A 93 CLTLVFEFME-KDLKKVLDENK------------TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDG 156 (311)
T ss_dssp CEEEEEECCS-EEHHHHHHTCT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTC
T ss_pred EEEEEEcCCC-CCHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCC
Confidence 9999999998 58888887543 2488999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
.+||+|||+++..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.........+..
T Consensus 157 ~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 234 (311)
T 3niz_A 157 ALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS 234 (311)
T ss_dssp CEEECCCTTCEETTSC--CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH
T ss_pred CEEEccCcCceecCCC--cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 9999999999876432 223344578999999999876 5689999999999999999999999987766655555444
Q ss_pred HhhccCCc--------hhhhccCCC--Cc-----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPI--------TDALDKGIA--EP-----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~--------~~~~~~~~~--~~-----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......+. ......... .. .......++.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 235 ILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 33221110 000000000 00 01112357889999999999999999999985
No 99
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=359.09 Aligned_cols=266 Identities=22% Similarity=0.343 Sum_probs=206.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+|+.||||++.... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 468999999999999999999999999999999986543 2344567889999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~e~~~~~~l~~~~~~~~-------------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQR-------------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EECCSEEHHHHHHHTSS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEeCCCchHHHHHhhhc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEe
Confidence 99999999999887543 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... ........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.........+.......
T Consensus 145 Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (311)
T 4agu_A 145 DFGFARLLTGP--SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222 (311)
T ss_dssp CCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred eCCCchhccCc--ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccc
Confidence 99999876432 222334578999999999876 568999999999999999999999998766554443333222111
Q ss_pred CCch-------hhh-ccCCCCc--------ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPIT-------DAL-DKGIAEP--------CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~-------~~~-~~~~~~~--------~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+.. ... ......+ .....+..+.+++.+||+.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 000 0000000 00123466889999999999999999999985
No 100
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-39 Score=354.35 Aligned_cols=265 Identities=22% Similarity=0.326 Sum_probs=206.9
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..++||+|+||+||+|++..+++.||||++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 578999999999999999999999999999999965443 3344577889999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++ ++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 e~~~~-~l~~~~~~~~------------~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~D 144 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN------------GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLAN 144 (292)
T ss_dssp ECCSE-EHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred ecCCC-CHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 99985 6666655432 2489999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCC-CCCccchhhHHHHHHHHHhCCCCCCCCCc-cchHHHHHHHhhcc
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEH-TSLAEWAWRHYAEE 873 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltg~~p~~~~~~-~~~~~~~~~~~~~~ 873 (969)
||+++.... .........||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ......+.+.....
T Consensus 145 fg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~ 222 (292)
T 3o0g_A 145 FGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222 (292)
T ss_dssp CTTCEECCS--CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCC
T ss_pred cccceecCC--ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 999987642 222334567899999999998766 79999999999999999999998765433 23333332222111
Q ss_pred CC--chhhhc------------cCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KP--ITDALD------------KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~--~~~~~~------------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. ...... ...........+..+.+++.+|++.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 000000 00000111233467889999999999999999999986
No 101
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-40 Score=354.38 Aligned_cols=255 Identities=25% Similarity=0.373 Sum_probs=211.2
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|.+. +++.||+|++...... .+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999987 5778999999654321 256899999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 85 e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR------------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp ECCTTCBHHHHHHTTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECC
T ss_pred EeCCCCcHHHHHHhcC------------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecc
Confidence 9999999999997643 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...........+...
T Consensus 150 fg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~----- 223 (269)
T 4hcu_A 150 FGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG----- 223 (269)
T ss_dssp TTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----
T ss_pred cccccccccc-ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----
Confidence 9999865321 1112234457788999999999999999999999999999999 88888765544333322111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.....+...+..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 224 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 224 ---------FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp ---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 111112222467899999999999999999999999998874
No 102
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.7e-40 Score=367.49 Aligned_cols=260 Identities=23% Similarity=0.276 Sum_probs=208.8
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhc--HHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN--QKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
+.+.|+..+.||+|+||.||+|.+..+++.||||++....... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567999999999999999999999999999999986432211 11246789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc-
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK- 790 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~- 790 (969)
|+||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~ 169 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADA---------GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENS 169 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHT---------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTT
T ss_pred EEEEeCCCCCCHHHHHHHhccc---------CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCC
Confidence 9999999999999888754321 13478999999999999999999998 9999999999999987654
Q ss_pred --EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 791 --AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 791 --~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+||+|||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+... .....+
T Consensus 170 ~~vkl~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i-- 244 (351)
T 3c0i_A 170 APVKLGGFGVAIQLGES--GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGI-- 244 (351)
T ss_dssp CCEEECCCTTCEECCTT--SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHH--
T ss_pred CcEEEecCcceeEecCC--CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHH--
Confidence 999999999876432 2223456799999999999999999999999999999999999999986432 111111
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......... ......+..+.+++.+||+.||++||++.|+++
T Consensus 245 -~~~~~~~~~--------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 245 -IKGKYKMNP--------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -HHTCCCCCH--------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HcCCCCCCc--------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111000 001122467899999999999999999999985
No 103
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6e-40 Score=363.94 Aligned_cols=261 Identities=17% Similarity=0.186 Sum_probs=213.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
-++|+..+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++.+++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 3578999999999999999999988999999999865432 24588999999999 99999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc---
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK--- 790 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--- 790 (969)
||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 83 v~e~~-~~~L~~~~~~~~------------~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~ 146 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCD------------RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQ 146 (330)
T ss_dssp EEECC-CCBHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCT
T ss_pred EEEeC-CCCHHHHHHHcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCC
Confidence 99999 999999998643 2489999999999999999999998 9999999999999999887
Q ss_pred --EEEeecccceecccCCCCc-----cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 791 --AKIADFGLAKMLAKQGEPH-----TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 791 --~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.......
T Consensus 147 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~ 226 (330)
T 2izr_A 147 QVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 226 (330)
T ss_dssp TSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH
T ss_pred ceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH
Confidence 9999999998765432211 124567999999999999999999999999999999999999999876554443
Q ss_pred HHHHHHhhccCC-chhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 EWAWRHYAEEKP-ITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+........... ..+.. .... ..+.+++..||+.||.+||+++++.+.|+++.
T Consensus 227 ~~~~~i~~~~~~~~~~~~--------~~~~-p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 227 ERYQKIGDTKRATPIEVL--------CENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHHHHHHHHHHSCHHHH--------TTTC-HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCCHHHH--------hccC-hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 332221111000 00000 0011 27899999999999999999999999998765
No 104
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=370.19 Aligned_cols=271 Identities=25% Similarity=0.363 Sum_probs=219.3
Q ss_pred cCCCccceeeecCcEEEEEEEEcC-------CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEc
Q 002085 636 SSLTESNLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS 707 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 707 (969)
++|...++||+|+||.||+|++.. .+..||||+++... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 578889999999999999999753 34579999996542 345567899999999999 89999999999999
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCcccc---CCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVS---GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
++..++||||+++|+|.+++......... .........+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 99999999999999999999876531110 00011124589999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchH
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLA 863 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~ 863 (969)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.......
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999987654433344455668899999999999999999999999999999999 88898766544333
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..+.. .. ....+...+..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 304 ~~~~~----~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 304 KLLKE----GH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHT----TC----------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHc----CC----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 32211 11 11112223467899999999999999999999999998885
No 105
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-40 Score=382.51 Aligned_cols=252 Identities=24% Similarity=0.323 Sum_probs=202.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..++||+|+||.||+|++..+|+.||||++.............+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999999999999999999765444445556788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcc-cCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||
T Consensus 227 ~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl 290 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-------------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKI 290 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-------------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEE
T ss_pred EeeCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEE
Confidence 99999999999997643 38899999999999999999997 7 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+.. ..
T Consensus 291 ~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~---~~ 365 (446)
T 4ejn_A 291 TDFGLCKEGIKD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---EE 365 (446)
T ss_dssp CCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC
T ss_pred ccCCCceeccCC--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh---CC
Confidence 999999754322 2233456899999999999999999999999999999999999999987665444333221 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~ 919 (969)
.. .+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 366 ~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 366 IR------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CC------------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC------------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 1112336789999999999999999 8988875
No 106
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.5e-40 Score=361.16 Aligned_cols=272 Identities=24% Similarity=0.336 Sum_probs=219.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
.++|...+.||+|+||.||+|.+. .+++.||||+++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 357889999999999999999873 455899999986432 3445678999999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCcccc-----------CCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVS-----------GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 778 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~-----------~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 778 (969)
..++||||+++++|.+++......... .........+++..++.++.|++.||+|||+. +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 999999999999999999875431000 00001123488999999999999999999998 9999999
Q ss_pred CCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCC
Q 002085 779 KSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGD 857 (969)
Q Consensus 779 kp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~ 857 (969)
||+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||+||++|||++ |+.||.+.
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987654433333445567899999999999899999999999999999999 99998876
Q ss_pred CccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 858 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
........+.... ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 257 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 257 PPERLFNLLKTGH--------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp CGGGHHHHHHTTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHhhcCC--------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 6554443322111 11112233467899999999999999999999999998874
No 107
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-40 Score=363.11 Aligned_cols=268 Identities=28% Similarity=0.387 Sum_probs=208.8
Q ss_pred ccCCCccceeeecCcEEEEEEE----EcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc--C
Q 002085 635 LSSLTESNLIGSGGSGQVYRID----INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS--E 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~ 708 (969)
.++|+..+.||+|+||.||+|+ ...+++.||||++... .....+.+.+|++++++++||||+++++++.. .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 4678999999999999999998 4567899999998543 34455789999999999999999999999865 4
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~ 150 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK------------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENE 150 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG------------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEET
T ss_pred CceEEEEEeCCCCCHHHHHHhcc------------cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCC
Confidence 56899999999999999998654 2488999999999999999999988 99999999999999999
Q ss_pred CcEEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
+.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ..
T Consensus 151 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-~~---- 225 (295)
T 3ugc_A 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-FM---- 225 (295)
T ss_dssp TEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH-HH----
T ss_pred CeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH-HH----
Confidence 99999999999876443222 2223445778899999999999999999999999999999999987642110 00
Q ss_pred HHhhccC-------CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 868 RHYAEEK-------PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 868 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
....... ...+.+......+.+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 226 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0000000 011111222222333445578999999999999999999999999998874
No 108
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.4e-39 Score=351.97 Aligned_cols=250 Identities=26% Similarity=0.353 Sum_probs=207.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 46789999999999999999999999999999998654433333456799999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 88 ~e~~~~~~l~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 151 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-------------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 151 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEEC
T ss_pred EecCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEE
Confidence 99999999999997654 388999999999999999999988 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||++..... .......|++.|+|||.+.+..++.++||||+|+++|||++|..||...........+... ..
T Consensus 152 Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~ 224 (279)
T 3fdn_A 152 DFGWSVHAPS----SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EF 224 (279)
T ss_dssp SCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT---CC
T ss_pred eccccccCCc----ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC---CC
Confidence 9999865422 2233457899999999999999999999999999999999999999866543333222111 00
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..+...+..+.+++.+||+.||++||++.|+++
T Consensus 225 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 225 ------------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ------------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ------------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111122367889999999999999999999996
No 109
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.9e-39 Score=350.55 Aligned_cols=255 Identities=23% Similarity=0.304 Sum_probs=212.9
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
+.++|+..+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 45789999999999999999999999999999999865433 34445789999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc---
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK--- 790 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--- 790 (969)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 83 v~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVARE-------------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EECCCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCC
T ss_pred EEecCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCc
Confidence 999999999999987643 388999999999999999999998 9999999999999987655
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
+||+|||++..... ........||+.|+|||.+.+..++.++||||+|+++|||++|+.||.+.........+....
T Consensus 147 ~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 223 (284)
T 3kk8_A 147 VKLADFGLAIEVND---SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223 (284)
T ss_dssp EEECCCTTCEECCS---SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred EEEeeceeeEEccc---CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc
Confidence 99999999976633 223345679999999999999999999999999999999999999998765544333322211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. ...+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~-----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 224 YD-----------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CC-----------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cc-----------CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 10 011111223467889999999999999999999986
No 110
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.4e-40 Score=356.95 Aligned_cols=254 Identities=23% Similarity=0.300 Sum_probs=201.2
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhc-----------------------HHHHHHHHHHHHHH
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN-----------------------QKLEKEFIAEIEIL 690 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l 690 (969)
..++|+..+.||+|+||.||+|++..+++.||||++....... ....+.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 3578999999999999999999999999999999986543211 11235689999999
Q ss_pred hccccCceeeEEEEEEc--CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhccc
Q 002085 691 GTIRHANIVKLWCCISS--ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD 768 (969)
Q Consensus 691 ~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~ 768 (969)
++++||||+++++++.+ .+..++||||+++++|.+++.. ..+++..+..++.|++.||+|||+.
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~lH~~ 156 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--------------KPLSEDQARFYFQDLIKGIEYLHYQ 156 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--------------SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--------------CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999987 5678999999999999876542 2489999999999999999999998
Q ss_pred CCCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCC---CCCccchhhHHHHHH
Q 002085 769 CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK---VNEKIDIYSFGVVLL 845 (969)
Q Consensus 769 ~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~ 845 (969)
+|+||||||+||+++.++.+||+|||+++.+... ........||+.|+|||.+.+.. ++.++||||+||++|
T Consensus 157 ---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~ 231 (298)
T 2zv2_A 157 ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231 (298)
T ss_dssp ---TEECCCCCGGGEEECTTSCEEECCCTTCEECSSS--SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred ---CeeccCCCHHHEEECCCCCEEEecCCCccccccc--cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence 9999999999999999999999999999876432 22234567999999999988765 377899999999999
Q ss_pred HHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 846 ELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 846 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
||++|+.||.+.........+.. .. ...+.....+..+.+++.+||+.||++||++.|+++
T Consensus 232 ~l~~g~~pf~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 232 CFVFGQCPFMDERIMCLHSKIKS---QA----------LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHH---CC----------CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHCCCCCCCccHHHHHHHHhc---cc----------CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 99999999976544332222211 10 011111123367899999999999999999999875
No 111
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-39 Score=375.28 Aligned_cols=256 Identities=25% Similarity=0.330 Sum_probs=214.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
..+|...+.||+|+||.||+|++..+|+.||||++.............+.+|+++++.++||||+++++++.+++..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 56899999999999999999999999999999999654332333456799999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 95 ~E~~~gg~L~~~l~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~ 158 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-------------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIA 158 (476)
T ss_dssp EECCSSEEHHHHTTSSS-------------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EeCCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEE
Confidence 99999999999997543 388999999999999999999988 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+.........+...
T Consensus 159 DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~---- 231 (476)
T 2y94_A 159 DFGLSNMMSDG---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG---- 231 (476)
T ss_dssp CCSSCEECCTT---CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT----
T ss_pred eccchhhcccc---ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC----
Confidence 99999876432 22344679999999999988776 68999999999999999999999876554433322111
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 924 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~ 924 (969)
. . ..+...+..+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 232 ~---------~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 232 I---------F--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp C---------C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred C---------c--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 0 0 011122367889999999999999999999996 45544
No 112
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.2e-40 Score=352.60 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=188.6
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
...++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (275)
T 2eue_A 10 AHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp CBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred CcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEE
Confidence 34678999999999999999999999899999999997654444455678999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+ +++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 90 lv~e~~-~~~l~~~~~~~~-------------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 152 (275)
T 2eue_A 90 MVIEYA-GNELFDYIVQRD-------------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp EEEECC-CEEHHHHHHTSS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEE
T ss_pred EEehhc-CCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEE
Confidence 999999 678888887543 388999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|+|||+++..... .......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||.+.........+....
T Consensus 153 l~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~- 228 (275)
T 2eue_A 153 IADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV- 228 (275)
T ss_dssp ECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-
T ss_pred EeecccceeccCc---ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-
Confidence 9999999765332 22334568999999999988765 689999999999999999999998765443333221111
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. .+...+..+.+++.+||+.||++|||+.|+++
T Consensus 229 --~~------------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 229 --YT------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CC------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CC------------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 00 11123367889999999999999999999985
No 113
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5e-40 Score=383.85 Aligned_cols=257 Identities=25% Similarity=0.349 Sum_probs=216.4
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..++||+|+||.||+|.+..++..||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 468888999999999999999988899999999865422 2467999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 296 E~~~~g~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNR-----------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp ECCTTCBHHHHHHHSCT-----------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred EccCCCCHHHHHHhcCc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEee
Confidence 99999999999986432 3488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... .........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+.....+.+..
T Consensus 362 FG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~------ 434 (495)
T 1opk_A 362 FGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK------ 434 (495)
T ss_dssp TTCEECCTTC-CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT------
T ss_pred cccceeccCC-ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------
Confidence 9999876432 2222234456789999999999999999999999999999999 8888877665544333221
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+...+.+...+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 435 --------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 435 --------DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --------CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1111223334478899999999999999999999999999885
No 114
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.2e-40 Score=352.65 Aligned_cols=257 Identities=31% Similarity=0.435 Sum_probs=197.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhc-HHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN-QKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|.+. ++.||||++....... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 357889999999999999999984 8899999986543222 2234678999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC------
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS------ 787 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~------ 787 (969)
||||+++++|.+++... .+++..++.++.|++.||+|||+....+|+||||||+||+++.
T Consensus 84 v~e~~~~~~L~~~~~~~--------------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~ 149 (271)
T 3dtc_A 84 VMEFARGGPLNRVLSGK--------------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD 149 (271)
T ss_dssp EEECCTTEEHHHHHTSS--------------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSC
T ss_pred EEEcCCCCCHHHHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccc
Confidence 99999999999998643 3889999999999999999999981112999999999999986
Q ss_pred --CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 788 --EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 788 --~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
++.+||+|||+++.+... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||.+.+.......
T Consensus 150 ~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 225 (271)
T 3dtc_A 150 LSNKILKITDFGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225 (271)
T ss_dssp CSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH
T ss_pred ccCcceEEccCCcccccccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh
Confidence 678999999999865332 22245789999999999999999999999999999999999999986554322211
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002085 866 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 924 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 924 (969)
. ... ....+.+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 226 ~---~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 V---AMN----------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp H---HTS----------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred h---hcC----------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1 111 111112233346789999999999999999999999999763
No 115
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.5e-40 Score=362.70 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=199.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCc---EEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|++..++. .||||+++.... .....+.+.+|++++++++||||+++++++.+....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3579999999999999999999876664 899999865432 234467899999999999999999999999877655
Q ss_pred ------EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE
Q 002085 712 ------LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 785 (969)
Q Consensus 712 ------~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill 785 (969)
++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~-------~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli 170 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGE-------NPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCML 170 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC----------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccc-------cccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEE
Confidence 99999999999999997543210 112488999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHH
Q 002085 786 DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAE 864 (969)
Q Consensus 786 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~ 864 (969)
+.++.+||+|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |..||.+........
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~ 250 (323)
T 3qup_A 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN 250 (323)
T ss_dssp CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH
Confidence 9999999999999987654433333445567889999999999999999999999999999999 888887766554443
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 865 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
.+.... ....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 251 ~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 251 YLIGGN--------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp HHHTTC--------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCC--------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 322111 111222334678999999999999999999999999998853
No 116
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-39 Score=352.82 Aligned_cols=257 Identities=27% Similarity=0.417 Sum_probs=207.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHH----HHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLE----KEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
.++|+..+.||+|+||.||+|++..+++.||+|++........... +.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 3578899999999999999999999999999999865433222221 67999999999999999999999987654
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCC--eEecCCCCCcEEECCC
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ--IIHRDVKSSNILLDSE 788 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~ 788 (969)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.+
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~ 160 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA------------HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSL 160 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT------------SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCC
T ss_pred -eEEEEecCCCCHHHHHhccc------------CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEecc
Confidence 79999999999999987643 2489999999999999999999988 7 9999999999999888
Q ss_pred Cc-----EEEeecccceecccCCCCccccccccCcccCchhhcc--cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccc
Q 002085 789 FK-----AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY--TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 861 (969)
Q Consensus 789 ~~-----~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~ 861 (969)
+. +||+|||+++... .......||+.|+|||.+. ...++.++||||+||++|||++|+.||.......
T Consensus 161 ~~~~~~~~kl~Dfg~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 235 (287)
T 4f0f_A 161 DENAPVCAKVADFGLSQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235 (287)
T ss_dssp CTTCSCCEEECCCTTCBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH
T ss_pred CCCCceeEEeCCCCcccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH
Confidence 76 9999999997532 2234467999999999984 4557889999999999999999999997655443
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002085 862 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 924 (969)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 924 (969)
..... .... .......+...+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 236 ~~~~~-~~~~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 236 IKFIN-MIRE----------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHH-HHHH----------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHH-HHhc----------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 22111 1111 1111112223346889999999999999999999999999864
No 117
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=364.19 Aligned_cols=274 Identities=21% Similarity=0.325 Sum_probs=215.3
Q ss_pred ccCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 708 (969)
.++|+..+.||+|+||.||+|++ ..+++.||||+++... .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 46788999999999999999997 3456789999996432 233457899999999999 899999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccC----------CCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSG----------SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 778 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~----------~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 778 (969)
+..++||||+++|+|.+++.......... ........+++..++.++.|++.||+|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 99999999999999999998754311000 0001123489999999999999999999998 9999999
Q ss_pred CCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCC
Q 002085 779 KSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGD 857 (969)
Q Consensus 779 kp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~ 857 (969)
||+||+++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999987765444444455668899999999999999999999999999999998 98898765
Q ss_pred CccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 858 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
......... ... +...+.+...+..+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 279 ~~~~~~~~~---~~~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 279 PVDANFYKL---IQN----------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp CCSHHHHHH---HHT----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CcHHHHHHH---Hhc----------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 443222111 111 11111222234678999999999999999999999999998863
No 118
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=359.04 Aligned_cols=249 Identities=21% Similarity=0.287 Sum_probs=198.8
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKL 712 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 712 (969)
+.++|+..++||+|+||+||+|++..+++.||||++...... .........|+..+.++ +||||+++++++.+++..+
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~ 133 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY 133 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC-hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence 446799999999999999999999989999999998654332 23334555566655555 8999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+ +++|.+++.... ..++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 134 lv~e~~-~~~L~~~~~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~k 197 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWG------------ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCK 197 (311)
T ss_dssp EEEECC-CCBHHHHHHHHC------------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEE
T ss_pred EEEecc-CCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEE
Confidence 999999 679999987653 2489999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
|+|||+++.... ........||+.|+|||++.+ .++.++|||||||++|||++|..|+.+.+. +.....
T Consensus 198 l~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~~~~ 266 (311)
T 3p1a_A 198 LGDFGLLVELGT---AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------WQQLRQ 266 (311)
T ss_dssp ECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------HHHHTT
T ss_pred Eccceeeeeccc---CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHhc
Confidence 999999987633 223344569999999998876 799999999999999999999888765321 111111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. ... ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 267 ~~-~~~--------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 267 GY-LPP--------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TC-CCH--------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cC-CCc--------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11 011 111123467899999999999999999999986
No 119
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=361.40 Aligned_cols=255 Identities=21% Similarity=0.338 Sum_probs=203.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC----
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN---- 709 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 709 (969)
+.++|+..+.||+|+||.||+|++..+|+.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 5678999999999999999999999899999999996543 2334578999999999999999999999986543
Q ss_pred -----------------------------------------------------ceEEEEeeccCCCHHHHhccCcCcccc
Q 002085 710 -----------------------------------------------------SKLLVYEYMENQSLDRWLHGRKRSLVS 736 (969)
Q Consensus 710 -----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~ 736 (969)
..++||||+++++|.+++.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---- 157 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS---- 157 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS----
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC----
Confidence 27999999999999999987553
Q ss_pred CCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCC--------
Q 002085 737 GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEP-------- 808 (969)
Q Consensus 737 ~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~-------- 808 (969)
....++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 158 ------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~ 228 (332)
T 3qd2_B 158 ------LEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228 (332)
T ss_dssp ------GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-----------
T ss_pred ------ccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccc
Confidence 23457778999999999999999998 9999999999999999999999999999877543211
Q ss_pred --ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCC
Q 002085 809 --HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAE 886 (969)
Q Consensus 809 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (969)
.......||+.|+|||++.+..++.++||||+||++|||++|..|+... .. ....... ....
T Consensus 229 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~-~~~~~~~----------~~~~ 292 (332)
T 3qd2_B 229 AYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VR-IITDVRN----------LKFP 292 (332)
T ss_dssp ---CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HH-HHHHHHT----------TCCC
T ss_pred ccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HH-HHHHhhc----------cCCC
Confidence 2223457999999999999999999999999999999999987653210 01 1111111 1111
Q ss_pred cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 887 PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 887 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.........+.+++.+||+.||++||++.|+++
T Consensus 293 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 293 LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 122334467789999999999999999999986
No 120
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2e-39 Score=374.53 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=209.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC-ceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-SKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~l 713 (969)
.++|+..+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..|+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 357888999999999999999985 7799999996543 2467899999999999999999999987655 7899
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 265 v~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl 330 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGR-----------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKV 330 (450)
T ss_dssp EEECCTTCBHHHHHHHHCT-----------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEE
T ss_pred EEEecCCCcHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEE
Confidence 9999999999999986542 2478899999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
+|||+++..... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+..
T Consensus 331 ~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~---- 401 (450)
T 1k9a_A 331 SDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK---- 401 (450)
T ss_dssp CCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT----
T ss_pred eeCCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----
Confidence 999999854221 122357889999999999999999999999999999998 9999877655544433221
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+...+.+...+..+.++|.+||+.||++|||+.|+++.|+.+.
T Consensus 402 ----------~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 402 ----------GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp ----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111223334578999999999999999999999999998875
No 121
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.5e-40 Score=378.36 Aligned_cols=256 Identities=26% Similarity=0.429 Sum_probs=211.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|.+. ++..||||+++.... ..+.+.+|++++++++||||+++++++. .+..++||
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 46888899999999999999986 467899999965332 2467999999999999999999999986 56789999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++|+|.++++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 262 e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 327 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEG-----------SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIAD 327 (454)
T ss_dssp CCCTTCBHHHHHHSHHH-----------HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECS
T ss_pred eecCCCcHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEee
Confidence 99999999999985431 2478899999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... .........+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+....
T Consensus 328 FG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~---- 402 (454)
T 1qcf_A 328 FGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---- 402 (454)
T ss_dssp TTGGGGBCCH-HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC----
T ss_pred CCCceEcCCC-ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----
Confidence 9999875321 1111233456789999999999999999999999999999999 999987765544433332211
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
..+.+...+..+.+++.+||+.||++|||+.+|++.|+.+..
T Consensus 403 ----------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 403 ----------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ----------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 112223345789999999999999999999999999999864
No 122
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-39 Score=358.93 Aligned_cols=273 Identities=23% Similarity=0.341 Sum_probs=217.4
Q ss_pred ccCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 708 (969)
.++|+..+.||+|+||.||+|++ ..+++.||||+++... .....+.+.+|+++++++ +||||+++++++.++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 35788999999999999999985 4467899999996543 234457899999999999 899999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccC-----CCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcE
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSG-----SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 783 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-----~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Ni 783 (969)
+..++||||+++|+|.+++.......... ........+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 99999999999999999998754311000 0001123589999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccch
Q 002085 784 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 862 (969)
Q Consensus 784 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~ 862 (969)
+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 999999999999999987755433333445567889999999999999999999999999999999 8888876544332
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
...... .. .....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 257 ~~~~~~---~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 257 FYKMIK---EG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHHH---HT----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhc---cC----------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 221111 11 111112223467899999999999999999999999998874
No 123
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.3e-39 Score=351.78 Aligned_cols=261 Identities=14% Similarity=0.153 Sum_probs=214.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|.+..+++.||||++..... .+.+.+|+++++.+ +|++++++++++.+....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 4579999999999999999999988999999999864332 24578899999999 79999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc---
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK--- 790 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--- 790 (969)
||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 84 v~e~~-~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~ 147 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCG------------RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNA 147 (298)
T ss_dssp EEECC-CCBHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTT
T ss_pred EEEec-CCCHHHHHHHhc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCC
Confidence 99999 999999998653 2489999999999999999999988 9999999999999988776
Q ss_pred --EEEeecccceecccCCCC-----ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 791 --AKIADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 791 --~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
+||+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.......
T Consensus 148 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 227 (298)
T 1csn_A 148 NMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK 227 (298)
T ss_dssp TCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH
T ss_pred CeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH
Confidence 999999999877543222 1234567999999999999999999999999999999999999999875544333
Q ss_pred HHHHHHhhc--cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 EWAWRHYAE--EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
......... ..+.... ....+..+.+++.+||+.||++||++++|++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 228 QKYERIGEKKQSTPLREL---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HHHHHHHHHHHHSCHHHH---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCccHHHH---------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 222111111 0111110 1122367899999999999999999999999998885
No 124
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-39 Score=353.48 Aligned_cols=266 Identities=20% Similarity=0.259 Sum_probs=208.7
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
....++|+..+.||+|+||.||+|++..+++.||+|++...........+.+.+|++++++++||||+++++++.+++..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 34567899999999999999999999989999999999766555556678899999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQG-------------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp EEEEECCCCEEHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred EEEEEecCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 99999999999999998643 388999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
||+|||++...... .........|++.|+|||.+.+..++.++||||||+++|||++|+.||.+...... .....
T Consensus 174 kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~ 248 (309)
T 2h34_A 174 YLVDFGIASATTDE-KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM----GAHIN 248 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH----HHHHH
T ss_pred EEecCccCcccccc-ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH----HHHhc
Confidence 99999999765432 12223345789999999999999999999999999999999999999976543221 11111
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcCC
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-SMKEVLQILRRCCP 926 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~ 926 (969)
........ .+...+..+.+++.+||+.||++|| ++.++++.|+++..
T Consensus 249 ~~~~~~~~--------~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 249 QAIPRPST--------VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp SCCCCGGG--------TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred cCCCCccc--------cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 11111111 1122235788999999999999999 99999999998864
No 125
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.9e-39 Score=365.96 Aligned_cols=271 Identities=20% Similarity=0.235 Sum_probs=211.0
Q ss_pred ccCCCccceeeec--CcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 635 LSSLTESNLIGSG--GSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 635 ~~~~~~~~~lG~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
..+|++.++||+| +||.||+|++..+++.||||++..... .....+.+.+|+++++.++||||+++++++.+++..|
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 3579999999999 999999999999999999999976432 3455678999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~k 168 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-----------DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVY 168 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-----------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEccCCCCHHHHHhhhcc-----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999986532 3488999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCC-----ccccccccCcccCchhhccc--CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 793 IADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
|+|||.+......+.. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.........
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 248 (389)
T 3gni_B 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 248 (389)
T ss_dssp ECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH
T ss_pred EcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9999998765332211 11223478999999999987 5799999999999999999999999987654433322
Q ss_pred HHHHhhcc---------C-------------Cchhhhcc---------CCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 866 AWRHYAEE---------K-------------PITDALDK---------GIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 866 ~~~~~~~~---------~-------------~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
........ . ...+.... ....+.+...+..+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta 328 (389)
T 3gni_B 249 KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328 (389)
T ss_dssp C--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred HhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence 11100000 0 00000000 00001222334678999999999999999999
Q ss_pred HHHHHH
Q 002085 915 KEVLQI 920 (969)
Q Consensus 915 ~evl~~ 920 (969)
.|+++.
T Consensus 329 ~ell~h 334 (389)
T 3gni_B 329 STLLNH 334 (389)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999853
No 126
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=361.82 Aligned_cols=252 Identities=25% Similarity=0.330 Sum_probs=193.7
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
+.+.|+..+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++.+++..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 4567999999999999999999999899999999986532 24668899999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC---CCc
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS---EFK 790 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~---~~~ 790 (969)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 126 v~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~ 189 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG-------------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAP 189 (349)
T ss_dssp EECCCCSCBHHHHHTTCS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCC
T ss_pred EEEeCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCC
Confidence 999999999999997643 388999999999999999999998 9999999999999975 789
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
+||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|..||........ .....
T Consensus 190 ~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~i 263 (349)
T 2w4o_A 190 LKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---MFRRI 263 (349)
T ss_dssp EEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---HHHHH
T ss_pred EEEccCccccccCcc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---HHHHH
Confidence 999999999865332 223346799999999999999999999999999999999999999976544321 11111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..... ....+.....+..+.+++.+||+.||++||++.|+++
T Consensus 264 ~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 264 LNCEY-------YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HTTCC-------CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HhCCC-------ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11110 0011112233467899999999999999999999987
No 127
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.4e-39 Score=364.79 Aligned_cols=254 Identities=24% Similarity=0.240 Sum_probs=198.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+++.||||++...... .+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 46899999999999999999999999999999999654322 25678999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc--EE
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK--AK 792 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~k 792 (969)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 95 ~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~k 158 (361)
T 3uc3_A 95 MEYASGGELYERICNAG-------------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLK 158 (361)
T ss_dssp EECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEE
T ss_pred EEeCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEE
Confidence 99999999999997643 389999999999999999999988 9999999999999987765 99
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhcccCCCCCc-cchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEK-IDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|+|||+++.... ........||+.|+|||++.+..++.+ +||||+||++|||++|+.||.+...............
T Consensus 159 l~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~ 235 (361)
T 3uc3_A 159 ICDFGYSKSSVL---HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235 (361)
T ss_dssp ECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred EeecCccccccc---cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 999999975322 222334579999999999988887665 8999999999999999999987554333332222221
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
... ...+.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~---------~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 236 SVK---------YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TTC---------CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cCC---------CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 111 1111111223678899999999999999999999963
No 128
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.7e-39 Score=355.18 Aligned_cols=266 Identities=25% Similarity=0.371 Sum_probs=197.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|.+..+|+.||+|+++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 3579999999999999999999998999999999865432 22235688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++ ++|.+++....... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~-------~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGN-------TPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSS-------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEecC-CCHHHHHHhccccc-------cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEEC
Confidence 99998 69999987643210 113488999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.........+.......
T Consensus 151 Dfg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 228 (317)
T 2pmi_A 151 DFGLARAFGIP--VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP 228 (317)
T ss_dssp CCSSCEETTSC--CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred cCccceecCCC--cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 99999876432 2223445789999999998764 68999999999999999999999998776555444443322111
Q ss_pred C-Cc----------------------hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 K-PI----------------------TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~-~~----------------------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. .. .+.+.+.. ....+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 229 NESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT----KEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGC----SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ChhHhhhhhhhhhcccccccccchhHHHhhcccc----cccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 00 00000000 0112357899999999999999999999885
No 129
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.4e-39 Score=357.65 Aligned_cols=258 Identities=20% Similarity=0.253 Sum_probs=212.1
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---HHHHHHHHHHHHHhccccCceeeEEEEEEcC
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTIRHANIVKLWCCISSE 708 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 708 (969)
..+.+.|+..+.||+|+||.||+|++..+|+.||+|++........ ...+.+.+|++++++++||||+++++++.++
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 3456789999999999999999999999999999999865432211 1246789999999999999999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~ 151 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLAQKE-------------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDK 151 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCS-------------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCT
T ss_pred CEEEEEEEcCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecC
Confidence 99999999999999999997543 378999999999999999999998 99999999999999988
Q ss_pred C----cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 789 F----KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 789 ~----~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
+ .+||+|||+++..... .......||+.|+|||.+.+..++.++||||+||++|||++|..||.+........
T Consensus 152 ~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 228 (321)
T 2a2a_A 152 NIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228 (321)
T ss_dssp TSSSCCEEECCCTTCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred CCCcCCEEEccCccceecCcc---ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 8 7999999999876432 22344579999999999999999999999999999999999999998765433322
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+.. ........ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 229 ~i~~---~~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 229 NITS---VSYDFDEE--------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHT---TCCCCCHH--------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHh---cccccChh--------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2211 11111100 01122367889999999999999999999986
No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.4e-39 Score=347.25 Aligned_cols=254 Identities=20% Similarity=0.286 Sum_probs=209.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC--CceE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--NSKL 712 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 712 (969)
.++|+..+.||+|+||.||+|++. ++.||||++.... ......+.+.+|++++++++||||+++++++.+. +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 457899999999999999999984 8889999986543 2344567899999999999999999999999887 7889
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCC--eEecCCCCCcEEECCCCc
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ--IIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~Nill~~~~~ 790 (969)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~ 151 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTN-----------FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMT 151 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSS-----------CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSC
T ss_pred eeecccCCCcHHHHHhhccc-----------CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcc
Confidence 99999999999999986542 3589999999999999999999987 7 999999999999999999
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCC---ccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNE---KIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
++++|||++... ......||+.|+|||.+.+..++. ++||||+||++|||++|+.||.+..........
T Consensus 152 ~~l~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~- 223 (271)
T 3kmu_A 152 ARISMADVKFSF-------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV- 223 (271)
T ss_dssp EEEEGGGSCCTT-------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH-
T ss_pred eeEEeccceeee-------cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH-
Confidence 999999987542 122356899999999998766554 799999999999999999999765543322211
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
... ......+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 224 --~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 224 --ALE----------GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp --HHS----------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred --Hhc----------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 111 1111122233467899999999999999999999999999875
No 131
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.6e-39 Score=351.57 Aligned_cols=264 Identities=26% Similarity=0.376 Sum_probs=203.7
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|++ .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 5788999999999999999998 5789999999865432 2222467889999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 e~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 143 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCE------------GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIAD 143 (288)
T ss_dssp ECCSE-EHHHHHHTST------------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred EecCC-CHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeE
Confidence 99985 9999987643 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.........+.+......
T Consensus 144 fg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (288)
T 1ob3_A 144 FGLARAFGIP--VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221 (288)
T ss_dssp TTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred CccccccCcc--ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCC
Confidence 9999865321 2223345789999999998764 589999999999999999999999987655444433333221110
Q ss_pred C--chhh-----hccCCC-------CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 875 P--ITDA-----LDKGIA-------EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 875 ~--~~~~-----~~~~~~-------~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. .... .++... .......+..+.+++.+||+.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0000 000000 0011123467889999999999999999999875
No 132
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=360.38 Aligned_cols=260 Identities=22% Similarity=0.330 Sum_probs=205.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEE----EEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFV----AVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
.++|+..++||+|+||.||+|.+..+++.| |+|.+.... .....+.+.+|++++++++||||+++++++.++.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 357899999999999999999998777654 666664322 2233578899999999999999999999998754
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK------------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred ceEEEEecCCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCC
Confidence 889999999999999998654 2488999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 869 (969)
+||+|||+++.+.............+|+.|+|||.+.+..++.++||||+||++|||++ |..||.+.........+...
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~ 235 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999987755444444445567889999999999999999999999999999999 99999876655544333211
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
...+.+...+..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 236 --------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 236 --------------ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --------------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1111222334678999999999999999999999999988863
No 133
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.5e-39 Score=359.60 Aligned_cols=272 Identities=24% Similarity=0.356 Sum_probs=216.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEc-------CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN-------GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCIS 706 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 706 (969)
.++|+..+.||+|+||.||+|++. .+++.||||+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 357889999999999999999975 356789999986542 344567899999999999 8999999999999
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCC---CCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcE
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGS---SSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 783 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Ni 783 (969)
+.+..++||||+++|+|.+++........... .......+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999987543111100 011123589999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccch
Q 002085 784 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSL 862 (969)
Q Consensus 784 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~ 862 (969)
+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 999999999999999987654333233344567889999999999899999999999999999999 8889876654433
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
...+.... ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 269 ~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 269 FKLLKEGH--------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp HHHHHHTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC--------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 33222111 11112223467899999999999999999999999998885
No 134
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.5e-39 Score=364.00 Aligned_cols=270 Identities=17% Similarity=0.225 Sum_probs=207.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCC-----CcEEEEEEEeccchhcHH--------HHHHHHHHHHHHhccccCceeeE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGA-----GEFVAVKRIWNNRKLNQK--------LEKEFIAEIEILGTIRHANIVKL 701 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l 701 (969)
.++|++.+.||+|+||.||+|.+..+ ++.||||++......... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 44899999999999999999998654 578999998654321111 01234556667788899999999
Q ss_pred EEEEEcC----CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecC
Q 002085 702 WCCISSE----NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRD 777 (969)
Q Consensus 702 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 777 (969)
++++... ...++||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+|||
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~------------~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrD 177 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA------------KRFSRKTVLQLSLRILDILEYIHEH---EYVHGD 177 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEec
Confidence 9998764 4579999999 999999998643 2489999999999999999999998 999999
Q ss_pred CCCCcEEEC--CCCcEEEeecccceecccCCCCcc-----ccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhC
Q 002085 778 VKSSNILLD--SEFKAKIADFGLAKMLAKQGEPHT-----MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG 850 (969)
Q Consensus 778 lkp~Nill~--~~~~~kl~Dfgla~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg 850 (969)
|||+||+++ .++.+||+|||+++.+........ .....||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 178 lkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g 257 (364)
T 3op5_A 178 IKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG 257 (364)
T ss_dssp CCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999 889999999999987654322211 1334599999999999999999999999999999999999
Q ss_pred CCCCCCCCc-cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 851 KEANYGDEH-TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 851 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+.||.+... ..........+. ..+.+.++..+.. ...+..+.+++..||+.||++||++.++++.|+++.
T Consensus 258 ~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 258 HLPWEDNLKDPKYVRDSKIRYR--ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp CCTTGGGTTCHHHHHHHHHHHH--HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHhh--hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 999985322 222222222221 1233333332211 112367899999999999999999999999998775
No 135
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.6e-39 Score=351.88 Aligned_cols=258 Identities=24% Similarity=0.318 Sum_probs=201.5
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|.+..+ +..||+|++... ......+.+.+|+.++++++||||+++++++. ++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 45789999999999999999998643 457999988543 23455678999999999999999999999984 4678
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 155 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK------------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 155 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT------------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred EEEEecCCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCE
Confidence 99999999999999998643 2488999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||+++..... .........+++.|+|||.+.+..++.++||||+||++|||++ |..||.+.........+...
T Consensus 156 kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~- 233 (281)
T 1mp8_A 156 KLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG- 233 (281)
T ss_dssp EECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-
T ss_pred EECccccccccCcc-cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-
Confidence 99999999876432 2222234457889999999999999999999999999999997 88898776655443332111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ..+.+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 234 ---~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 234 ---E----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp ---C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---C----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 11122233467899999999999999999999999998874
No 136
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.7e-39 Score=365.23 Aligned_cols=258 Identities=22% Similarity=0.286 Sum_probs=198.4
Q ss_pred hhhhccCCCcc-ceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhc-cccCceeeEEEEEEc-
Q 002085 631 ESNILSSLTES-NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT-IRHANIVKLWCCISS- 707 (969)
Q Consensus 631 ~~~~~~~~~~~-~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~- 707 (969)
...+.++|... ++||+|+||.||+|.+..+++.||||++... ..+.+|++++.+ .+||||+++++++..
T Consensus 56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~ 127 (400)
T 1nxk_A 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENL 127 (400)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeec
Confidence 34456778776 7899999999999999999999999998532 356778888755 489999999998865
Q ss_pred ---CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 708 ---ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 708 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
.+..|+||||++||+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 128 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nil 193 (400)
T 1nxk_A 128 YAGRKCLLIVMECLDGGELFSRIQDRGD-----------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLL 193 (400)
T ss_dssp ETTEEEEEEEEECCCSEEHHHHHHCC--------------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred ccCCcEEEEEEEeCCCCcHHHHHHHhCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEE
Confidence 5678999999999999999986532 3489999999999999999999998 9999999999999
Q ss_pred ECC---CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccc
Q 002085 785 LDS---EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 861 (969)
Q Consensus 785 l~~---~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~ 861 (969)
++. ++.+||+|||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....
T Consensus 194 l~~~~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 270 (400)
T 1nxk_A 194 YTSKRPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 270 (400)
T ss_dssp ESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCS
T ss_pred EecCCCCccEEEEecccccccCC---CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccc
Confidence 998 78899999999986532 222345678999999999999999999999999999999999999998654332
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 862 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
.............. ....+.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~i~~~~~-------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 271 ISPGMKTRIRMGQY-------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp SCCSHHHHHHHTCC-------CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccHHHHHHHHcCcc-------cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111111111100 00111112334678999999999999999999999973
No 137
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.4e-39 Score=359.57 Aligned_cols=255 Identities=23% Similarity=0.241 Sum_probs=206.1
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCc
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENS 710 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 710 (969)
..+.++|+..+.||+|+||.||+|.+..+++.||||++..... ...+|++++.++ +||||+++++++.+++.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 90 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKY 90 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence 3456789999999999999999999999999999999965432 245688888888 79999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC--
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-- 788 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-- 788 (969)
.|+||||++||+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++.++
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~-------------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~ 154 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK-------------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESG 154 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCC
Confidence 999999999999999997643 388999999999999999999998 99999999999998543
Q ss_pred --CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 789 --FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 789 --~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
+.+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.......+..
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~ 232 (342)
T 2qr7_A 155 NPESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232 (342)
T ss_dssp SGGGEEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH
T ss_pred CcCeEEEEECCCcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH
Confidence 359999999998764432 2234467899999999998888999999999999999999999999864433332222
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......... .....+...+..+.+++.+||..||++||++.|+++
T Consensus 233 ~~i~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 233 ARIGSGKFS--------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHCCCC--------CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHccCCcc--------cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 221111111 111112233467899999999999999999999986
No 138
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.4e-39 Score=348.61 Aligned_cols=262 Identities=27% Similarity=0.365 Sum_probs=198.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
-.+|+..++||+|+||.||+|++. ..||||+++.... .....+.+.+|++++++++||||+++++++ .....++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 357999999999999999999874 3599999865432 345567899999999999999999999965 55678999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 98 ~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~ 162 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE------------TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIG 162 (289)
T ss_dssp EECCCEEEHHHHHTTC---------------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred EEecCCCcHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEc
Confidence 99999999999997543 3489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|||+++...............||+.|+|||.+. +..++.++||||+||++|||++|+.||.................
T Consensus 163 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 242 (289)
T 3og7_A 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS 242 (289)
T ss_dssp CCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTS
T ss_pred cceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccc
Confidence 999998664433333444567999999999986 56788899999999999999999999976544322211111110
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..... .......+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 243 ~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 243 LSPDL---------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCCT---------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cCcch---------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 00000 0111223467899999999999999999999999999885
No 139
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2e-39 Score=351.50 Aligned_cols=256 Identities=23% Similarity=0.331 Sum_probs=208.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++. ++..||+|++...... .+.+.+|++++++++||||+++++++.+++..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 457889999999999999999886 5778999999654321 35688999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 98 ~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 162 (283)
T 3gen_A 98 TEYMANGCLLNYLREMR------------HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVS 162 (283)
T ss_dssp ECCCTTCBHHHHHHCGG------------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEEC
T ss_pred EeccCCCcHHHHHHHhc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEc
Confidence 99999999999998643 2489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...........+...
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~---- 237 (283)
T 3gen_A 163 DFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG---- 237 (283)
T ss_dssp STTGGGGBCCH-HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT----
T ss_pred ccccccccccc-ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc----
Confidence 99999865322 1112233457788999999999999999999999999999998 99998766544333322111
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.....+...+..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 238 ----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 238 ----------LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp ----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 111111222367889999999999999999999999998875
No 140
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=363.06 Aligned_cols=249 Identities=24% Similarity=0.308 Sum_probs=201.6
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEEeec
Q 002085 639 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYM 718 (969)
Q Consensus 639 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 718 (969)
...+.||+|+||.||+|.+..+|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 33578999999999999999899999999986543 234568999999999999999999999999999999999999
Q ss_pred cCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE--CCCCcEEEeec
Q 002085 719 ENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL--DSEFKAKIADF 796 (969)
Q Consensus 719 ~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill--~~~~~~kl~Df 796 (969)
++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 169 ~~~~L~~~l~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DF 233 (373)
T 2x4f_A 169 DGGELFDRIIDES------------YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDF 233 (373)
T ss_dssp TTCEEHHHHHHTG------------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCC
T ss_pred CCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeC
Confidence 9999999987543 2488999999999999999999998 99999999999999 66789999999
Q ss_pred ccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCc
Q 002085 797 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPI 876 (969)
Q Consensus 797 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 876 (969)
|+++.+... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.........+.. .....
T Consensus 234 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~---~~~~~ 307 (373)
T 2x4f_A 234 GLARRYKPR---EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA---CRWDL 307 (373)
T ss_dssp SSCEECCTT---CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TCCCS
T ss_pred CCceecCCc---cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---ccCCC
Confidence 999876432 223345799999999999998999999999999999999999999987655433332221 11111
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 877 TDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
........+..+.+++.+||+.||++||++.|+++
T Consensus 308 --------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 308 --------EDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --------ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11111223467899999999999999999999986
No 141
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.3e-39 Score=347.06 Aligned_cols=254 Identities=22% Similarity=0.254 Sum_probs=209.1
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++.++|+..+.||+|+||.||+|.+..++..||+|++...... ..+.+.+|++++++++||||+++++++.+++..
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (277)
T 3f3z_A 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDI 81 (277)
T ss_dssp -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeE
Confidence 34567899999999999999999999999999999998654322 246789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE---CCC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---DSE 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~ 788 (969)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++ +.+
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 145 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR-------------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPD 145 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTT
T ss_pred EEEEeccCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCC
Confidence 99999999999999987643 388999999999999999999998 99999999999999 788
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+.++|+|||++..+... .......||+.|+|||.+.+ .++.++||||+|+++|||++|+.||...........+..
T Consensus 146 ~~~~l~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 221 (277)
T 3f3z_A 146 SPLKLIDFGLAARFKPG---KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIRE 221 (277)
T ss_dssp CCEEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CcEEEEecccceeccCc---cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 89999999999876432 23344579999999998865 499999999999999999999999987654433322211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
........ .....+..+.+++.+||+.||++||++.|+++
T Consensus 222 ---~~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 222 ---GTFTFPEK--------DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---CCCCCCHH--------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---CCCCCCch--------hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111000 00122467899999999999999999999985
No 142
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=365.21 Aligned_cols=273 Identities=21% Similarity=0.243 Sum_probs=216.1
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC--ceE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--SKL 712 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 712 (969)
-++|+..++||+|+||.||+|++..+|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 35789999999999999999999999999999999654322 22467789999999999999999999998755 679
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE----CCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL----DSE 788 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill----~~~ 788 (969)
+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~----------~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 152 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSN----------AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQ 152 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGG----------TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSC
T ss_pred EEEecCCCCCHHHHHHhhhc----------ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCc
Confidence 99999999999999986543 12389999999999999999999998 99999999999999 777
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhccc--------CCCCCccchhhHHHHHHHHHhCCCCCCCCCcc
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT--------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 860 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~il~elltg~~p~~~~~~~ 860 (969)
+.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 153 ~~~kL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 153 SVYKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp EEEEECCGGGCEECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred eeEEEecCCCceEccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 88999999999876432 23344679999999999865 46778999999999999999999999754332
Q ss_pred c-hHHHHHHHhhccCCchhh--h------------ccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 861 S-LAEWAWRHYAEEKPITDA--L------------DKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 861 ~-~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ..+.+.... ...+.... . ...............+.+++.+||+.||++||+++|+++.++.+.
T Consensus 230 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 230 RRNKEVMYKII-TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp TTCHHHHHHHH-HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred cchHHHHHHHh-cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 2 222222222 21111000 0 001112234667788999999999999999999999999998876
Q ss_pred C
Q 002085 926 P 926 (969)
Q Consensus 926 ~ 926 (969)
.
T Consensus 309 ~ 309 (396)
T 4eut_A 309 H 309 (396)
T ss_dssp T
T ss_pred h
Confidence 4
No 143
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.1e-39 Score=360.34 Aligned_cols=273 Identities=23% Similarity=0.350 Sum_probs=216.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCc-----EEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGE-----FVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 708 (969)
.++|+..+.||+|+||.||+|.+..+++ .||+|++.... .....+.+.+|+++++++ +||||+++++++.++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 4678899999999999999999876554 79999986543 334457899999999999 899999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccC-CCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSG-SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
+..++||||+++|+|.+++.......... ........+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 99999999999999999998643211000 0011123578999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHH
Q 002085 788 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWA 866 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~ 866 (969)
++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+..........
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 279 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence 99999999999987655444434445667889999999999999999999999999999999 88888765443322211
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 867 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. .. .....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 280 ~~---~~----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 280 VK---DG----------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HH---HT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hh---cC----------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 11 11 111111222367899999999999999999999999998874
No 144
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.4e-39 Score=360.65 Aligned_cols=251 Identities=27% Similarity=0.387 Sum_probs=207.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.+.|+..+.||+|+||.||+|++..+++.||||++...........+.+.+|++++++++||||+++++++.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588889999999999999999889999999999765444455567899999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 133 ~e~~~-g~l~~~l~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 196 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK------------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLG 196 (348)
T ss_dssp EECCS-EEHHHHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEEC
T ss_pred EecCC-CCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEe
Confidence 99997 68888886433 2489999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhh
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYA 871 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 871 (969)
|||+++.... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.+.........+ ..
T Consensus 197 DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~---~~ 267 (348)
T 1u5q_A 197 DFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQ 267 (348)
T ss_dssp CCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HH
T ss_pred eccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---Hh
Confidence 9999976532 23457999999999984 567899999999999999999999999765543222211 11
Q ss_pred ccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 872 EEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
...+ .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 268 ~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 268 NESP----------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp SCCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred cCCC----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1111 00111223678899999999999999999999864
No 145
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.4e-39 Score=356.44 Aligned_cols=247 Identities=22% Similarity=0.278 Sum_probs=182.1
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCCceEEEEeecc
Q 002085 641 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVYEYME 719 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 719 (969)
.+.||+|+||.||+|.+..+++.||||++.... ...+.+|+++++.+. ||||+++++++.++...|+||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 478999999999999999999999999985432 356788999999996 9999999999999999999999999
Q ss_pred CCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC---cEEEeec
Q 002085 720 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF---KAKIADF 796 (969)
Q Consensus 720 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Df 796 (969)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 90 ~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Df 153 (325)
T 3kn6_A 90 GGELFERIKKKK-------------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDF 153 (325)
T ss_dssp SCBHHHHHHHCS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCC
T ss_pred CCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecc
Confidence 999999998654 389999999999999999999998 999999999999998766 8999999
Q ss_pred ccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc----chHHHHHHHhhc
Q 002085 797 GLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT----SLAEWAWRHYAE 872 (969)
Q Consensus 797 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~----~~~~~~~~~~~~ 872 (969)
|+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.. ...+ +......
T Consensus 154 g~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~i~~ 230 (325)
T 3kn6_A 154 GFARLKPPD--NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKK 230 (325)
T ss_dssp TTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-HHHHHTT
T ss_pred ccceecCCC--CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-HHHHHHc
Confidence 999865432 22234457899999999999999999999999999999999999999764431 1111 1111111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
... ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~-------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 231 GDF-------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp TCC-------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCC-------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 110 0111111233578899999999999999999998874
No 146
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.7e-39 Score=344.81 Aligned_cols=256 Identities=23% Similarity=0.301 Sum_probs=210.2
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
+.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 45689999999999999999999998999999999865432 2345788999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 83 v~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 146 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPDI-------------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKI 146 (276)
T ss_dssp EEECCTTEEGGGGSBTTT-------------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEecCCCcHHHHHhhcc-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEE
Confidence 999999999999987543 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
+|||.+..+.............||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||............ ...
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~ 223 (276)
T 2yex_A 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKE 223 (276)
T ss_dssp CCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH---HHT
T ss_pred eeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---hhh
Confidence 99999987654333333445679999999999987765 67899999999999999999999765443221111 111
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 224 KKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TCTT---------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccc---------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1100 0111223467889999999999999999999875
No 147
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.5e-39 Score=359.51 Aligned_cols=280 Identities=23% Similarity=0.218 Sum_probs=213.4
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh--cHHHHHHHHHHHHHHhccccCceeeEEEEEEcC
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL--NQKLEKEFIAEIEILGTIRHANIVKLWCCISSE 708 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 708 (969)
..++.++|+..+.||+|+||.||+|.+..+++.||+|++...... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678899999999999999999999999999999998654321 234457899999999999999999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCcccc---------------------------CCCCcccccCChHHHHHHHHHHHHh
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVS---------------------------GSSSVHQHVLHWPTRLQIAIGAAQG 761 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~---------------------------~~~~~~~~~l~~~~~~~i~~~ia~~ 761 (969)
+..++||||+++|+|.+++......... .........+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999642211000 0000001234667788999999999
Q ss_pred hhhhcccCCCCeEecCCCCCcEEECCCC--cEEEeecccceecccCCCC--ccccccccCcccCchhhccc--CCCCCcc
Q 002085 762 LCYMHHDCTPQIIHRDVKSSNILLDSEF--KAKIADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYT--TKVNEKI 835 (969)
Q Consensus 762 L~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~s 835 (969)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.+...... .......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999998 999999999999998776 8999999999876443222 23345679999999999875 6789999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002085 836 DIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMK 915 (969)
Q Consensus 836 DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ 915 (969)
|||||||++|||++|+.||.+.........+.. .... ...+.....+..+.+++.+||+.||++||++.
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 326 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN---KKLC--------FENPNYNVLSPLARDLLSNLLNRNVDERFDAM 326 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCC--------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHh---cccc--------cCCcccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 999999999999999999987654433322221 1111 11111222346789999999999999999999
Q ss_pred HHHH--HHhhc
Q 002085 916 EVLQ--ILRRC 924 (969)
Q Consensus 916 evl~--~L~~~ 924 (969)
|+++ .+++.
T Consensus 327 ~~l~hp~~~~~ 337 (345)
T 3hko_A 327 RALQHPWISQF 337 (345)
T ss_dssp HHHHSHHHHTT
T ss_pred HHhcChhhccC
Confidence 9987 44444
No 148
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5e-39 Score=353.33 Aligned_cols=268 Identities=23% Similarity=0.358 Sum_probs=206.2
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..++|+..+.||+|+||.||+|....+|+.||||++......+......+.+|++++++++||||+++++++.+.+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 45689999999999999999999988999999999976444455667889999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++...... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 110 v~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl 177 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQ---------KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKL 177 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHT---------TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEecCCCCCHHHHHHHhccc---------ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEE
Confidence 99999999999999753210 23488999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++...... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||.+.... ....... ....
T Consensus 178 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~-~~~~ 253 (310)
T 2wqm_A 178 GDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKK-IEQC 253 (310)
T ss_dssp CCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHHH-HHTT
T ss_pred EeccceeeecCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHHH-hhcc
Confidence 9999998654321 2223456899999999999999999999999999999999999999765332 1111111 1110
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
. .........+..+.+++.+||+.||++||++.|+++.|+++.+
T Consensus 254 ~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 254 D---------YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp C---------SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c---------CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 0 0000111233678999999999999999999999999998853
No 149
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.6e-39 Score=353.34 Aligned_cols=258 Identities=25% Similarity=0.348 Sum_probs=217.5
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 457888999999999999999999889999999986432 2356789999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 88 ~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 153 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNR-----------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 153 (288)
T ss_dssp EECCTTEEHHHHHHHCCT-----------TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhccc-----------CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEc
Confidence 999999999999986542 3589999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |..||.+.+.......+...
T Consensus 154 Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~---- 228 (288)
T 3kfa_A 154 DFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD---- 228 (288)
T ss_dssp CCCGGGTSCSS-SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT----
T ss_pred cCccceeccCC-ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc----
Confidence 99999866432 2233344567889999999999999999999999999999999 88888776655444333221
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.....+...+..+.+++.+|++.||++||++.|+++.|+++.
T Consensus 229 ----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 ----------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 111122233467899999999999999999999999998875
No 150
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=348.61 Aligned_cols=254 Identities=24% Similarity=0.332 Sum_probs=188.9
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..++|+..+.||+|+||.||+|++..+|+.||||++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 34679999999999999999999988999999999965433233334779999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 89 v~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl 153 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV------------KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKI 153 (278)
T ss_dssp EEECCTTEEHHHHHHTCS------------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEE
T ss_pred EEecCCCCcHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEE
Confidence 999999999999998643 2488999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||++....... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........... .
T Consensus 154 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~---- 224 (278)
T 3cok_A 154 ADFGLATQLKMPH--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK---V---- 224 (278)
T ss_dssp CCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------C----
T ss_pred EeecceeeccCCC--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH---H----
Confidence 9999998764321 122345689999999999998999999999999999999999999976543322110 0
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..... ..+...+..+.+++.+||+.||++||+++|+++
T Consensus 225 ------~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 225 ------VLADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------CSSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------hhccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00000 111223367889999999999999999999875
No 151
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.9e-39 Score=353.95 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=198.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEc---CCCcEEEEEEEeccchh-cHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
.++|+..+.||+|+||.||+|+.. .+++.||+|+++..... .......+.+|+++++.++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 467999999999999999999985 57899999999654322 22334668899999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.|+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~ 159 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-------------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGH 159 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSC
T ss_pred EEEEEeCCCCCcHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCc
Confidence 999999999999999997643 378899999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.........+..
T Consensus 160 ~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-- 235 (327)
T 3a62_A 160 VKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK-- 235 (327)
T ss_dssp EEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--
T ss_pred EEEEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh--
Confidence 9999999997643221 223345799999999999999999999999999999999999999987654433332221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~ 919 (969)
.... .+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 236 -~~~~------------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 236 -CKLN------------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -TCCC------------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -CCCC------------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1111 1112336789999999999999999 6777765
No 152
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.5e-39 Score=373.92 Aligned_cols=257 Identities=28% Similarity=0.455 Sum_probs=206.0
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..++||+|+||.||+|.+.. +..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 467888999999999999999974 56799999865432 13578999999999999999999999876 6789999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 258 e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 323 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETG-----------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 323 (452)
T ss_dssp CCCTTCBHHHHHSHHHH-----------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred hhhcCCCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECC
Confidence 99999999999975321 3488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... .........+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+..
T Consensus 324 fG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~------ 396 (452)
T 1fmk_A 324 FGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER------ 396 (452)
T ss_dssp CCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT------
T ss_pred CccceecCCC-ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------
Confidence 9999876432 1222234457889999999999999999999999999999999 8888876654433322211
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 927 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 927 (969)
+...+.+...+..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 397 --------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 397 --------GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp --------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred --------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 111222334457889999999999999999999999999998643
No 153
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8.5e-39 Score=346.79 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=209.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 46799999999999999999999989999999998654332333356789999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 93 ~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 156 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-------------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIA 156 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred EEeCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEe
Confidence 99999999999998643 388999999999999999999988 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||++..... .......|++.|+|||.+.+..++.++||||+|+++|||++|..||...........+. ....
T Consensus 157 Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~ 229 (284)
T 2vgo_A 157 DFGWSVHAPS----LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV---NVDL 229 (284)
T ss_dssp CCTTCEECSS----SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TTCC
T ss_pred cccccccCcc----cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh---cccc
Confidence 9999876532 12234578999999999999999999999999999999999999997655433222111 1110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..+...+..+.+++.+|++.||++||++.|+++
T Consensus 230 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 230 ------------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 111223367889999999999999999999986
No 154
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-39 Score=367.47 Aligned_cols=268 Identities=26% Similarity=0.360 Sum_probs=201.2
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCC-
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSEN- 709 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~- 709 (969)
..+.++|+..+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 456789999999999999999999999999999999986442 23444677889999999997 999999999997543
Q ss_pred -ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 710 -SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 710 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
..|+||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~--------------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~ 145 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN--------------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAE 145 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred CEEEEEecccC-cCHHHHHHcC--------------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCC
Confidence 6899999997 6899998753 388899999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCC-------------------CCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQG-------------------EPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELV 848 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~ell 848 (969)
+.+||+|||+|+.+.... .........||+.|+|||++.+ ..++.++||||+||++|||+
T Consensus 146 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 225 (388)
T 3oz6_A 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225 (388)
T ss_dssp CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH
Confidence 999999999998764311 1122344679999999999886 67899999999999999999
Q ss_pred hCCCCCCCCCccchHHHHHHHhhccCCchhhhcc----------------------CCCCcc------------cHHHHH
Q 002085 849 TGKEANYGDEHTSLAEWAWRHYAEEKPITDALDK----------------------GIAEPC------------YLEEMT 894 (969)
Q Consensus 849 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~------------~~~~~~ 894 (969)
+|+.||.+.+.......+....... ..+.+.. ...... ....+.
T Consensus 226 ~g~~pf~~~~~~~~~~~i~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (388)
T 3oz6_A 226 CGKPIFPGSSTMNQLERIIGVIDFP--SNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303 (388)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCC--CHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCH
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCC--CHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCH
Confidence 9999998876554444333221111 0000000 000000 001235
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 895 TVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 895 ~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
.+.+++.+||+.||++|||++|+++.
T Consensus 304 ~~~dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 304 EALDLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhhccCcccCCCHHHHhCC
Confidence 78899999999999999999999864
No 155
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.6e-39 Score=357.77 Aligned_cols=270 Identities=21% Similarity=0.325 Sum_probs=216.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEc-----CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN-----GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
.++|+..+.||+|+||.||+|.+. .+++.||||++.... .......+.+|+++++.++||||+++++++.+++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 467999999999999999999875 357789999986432 3344567999999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..++||||+++|+|.+++......... ......+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMAN---NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHH---CTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhcc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 999999999999999999864321000 00013468999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 868 (969)
.+||+|||+++...............+|+.|+|||.+.+..++.++||||+||++|||++ |..||.+.........+.
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~- 254 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM- 254 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH-
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH-
Confidence 999999999987654333333344567899999999999999999999999999999999 778887654433322221
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
... ....+...+..+.+++.+||+.||++||++.|+++.|++...
T Consensus 255 ---~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 255 ---EGG----------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp ---TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred ---cCC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111 011122334678999999999999999999999999998853
No 156
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-39 Score=356.18 Aligned_cols=260 Identities=27% Similarity=0.454 Sum_probs=206.5
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCC----CcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGA----GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
.++|+..+.||+|+||.||+|.+..+ +..||||+++... .......+.+|++++++++||||+++++++.+.+.
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 45788889999999999999988644 3469999986432 34445689999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 185 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKD------------GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLV 185 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTT------------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCC
T ss_pred cEEEEeCCCCCcHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCc
Confidence 999999999999999997643 2488999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 868 (969)
+||+|||+++........ .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+.........+.
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~- 264 (333)
T 1mqb_A 186 CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN- 264 (333)
T ss_dssp EEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-
T ss_pred EEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-
Confidence 999999999876443211 12223456889999999999999999999999999999999 999987665433322221
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. ...+.+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 265 ---~~----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 265 ---DG----------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp ---TT----------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---CC----------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 111122233467899999999999999999999999998875
No 157
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.3e-39 Score=390.62 Aligned_cols=247 Identities=23% Similarity=0.319 Sum_probs=209.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..++||+|+||.||+|++..+++.||||+++..........+.+..|.+++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 56899999999999999999999999999999999765433344456788999999988 79999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||++||+|.++++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 420 V~E~~~gg~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL 483 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVG-------------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKI 483 (674)
T ss_dssp EEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEE
T ss_pred EEeCcCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEE
Confidence 999999999999998654 389999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+|+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...+.+.+.. ..
T Consensus 484 ~DFGla~~~~~~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~---~~ 558 (674)
T 3pfq_A 484 ADFGMCKENIWD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---HN 558 (674)
T ss_dssp CCCTTCEECCCT--TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS---SC
T ss_pred eecceeeccccC--CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh---CC
Confidence 999999864332 2234456899999999999999999999999999999999999999988765444433321 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
. ..+...+.++.+++.+||+.||++||++
T Consensus 559 ~------------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 V------------AYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp C------------CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred C------------CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 1 1122334678999999999999999987
No 158
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-38 Score=347.61 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=213.4
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..++|+..+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 34679999999999999999999999999999999976654555667889999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 93 v~e~~~~~~L~~~~~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 156 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRK-------------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKI 156 (294)
T ss_dssp EEECCTTCBHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEecCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEE
Confidence 999999999999987543 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++...... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...........+ ....
T Consensus 157 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~ 231 (294)
T 2rku_A 157 GDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI---KKNE 231 (294)
T ss_dssp CCCTTCEECCSTT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HTTC
T ss_pred EeccCceecccCc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hhcc
Confidence 9999998764322 2233457899999999999989999999999999999999999999765433222111 1111
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. ..+......+.+++.+||+.||++||++.|+++
T Consensus 232 ~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 232 Y------------SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp C------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred C------------CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 011122367889999999999999999999996
No 159
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-39 Score=356.61 Aligned_cols=270 Identities=22% Similarity=0.306 Sum_probs=204.7
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhc--HHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN--QKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
...++|+..+.||+|+||.||+|++..+|+.||||++....... ....+.+.+|+++++.++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999999899999999986432211 1223568899999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 150 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS------------LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGV 150 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC------------SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred eEEEEEcCCC-CHHHHHHhcC------------cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCC
Confidence 9999999985 8998887543 2478899999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
+||+|||+++.+... ........||+.|+|||++.+. .++.++||||+||++|||++|..||.+.........+...
T Consensus 151 ~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~ 228 (346)
T 1ua2_A 151 LKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET 228 (346)
T ss_dssp EEECCCGGGSTTTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEEEecccceeccCC--cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 999999999876432 2233456789999999998764 4889999999999999999999998876655444444332
Q ss_pred hhccCC--ch------hhhccCCCCccc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 870 YAEEKP--IT------DALDKGIAEPCY-----LEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 870 ~~~~~~--~~------~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
...... .. +..........+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 229 LGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 211110 00 000000000001 2234678999999999999999999999974
No 160
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.2e-38 Score=368.33 Aligned_cols=264 Identities=24% Similarity=0.269 Sum_probs=203.9
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC---
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--- 709 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 709 (969)
.+.++|+..++||+|+||.||+|.+..+++.||||++.... ......+.+.+|+++++.++||||+++++++...+
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence 34678999999999999999999999999999999996542 24455678999999999999999999999996553
Q ss_pred ---ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 710 ---SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 710 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
..|+||||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~~---------------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~ 198 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQM---------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 198 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHTS---------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred cCCeEEEEEeCCCC-CHHHHHhh---------------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEe
Confidence 56999999975 46666642 278899999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
.++.+||+|||+|+.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+....+
T Consensus 199 ~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i 275 (464)
T 3ttj_A 199 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 275 (464)
T ss_dssp TTSCEEECCCCCC--------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCCCEEEEEEEeeeecCC---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999987633 22344568999999999999999999999999999999999999999877654443333
Q ss_pred HHHhhccC------------------------CchhhhccCCC---CcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEEK------------------------PITDALDKGIA---EPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~~------------------------~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
........ ........... ..........+.+++.+||+.||++|||++|+++
T Consensus 276 ~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 22211100 00000000000 0011122567899999999999999999999986
No 161
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.2e-38 Score=354.10 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=213.8
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..++|...+.||+|+||.||+|++..+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 35679999999999999999999999999999999976655555667889999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 119 v~e~~~~~~L~~~~~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl 182 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRK-------------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKI 182 (335)
T ss_dssp EECCCTTCBHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEE
T ss_pred EEecCCCCCHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEE
Confidence 999999999999987543 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.. ..
T Consensus 183 ~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~ 257 (335)
T 2owb_A 183 GDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK---NE 257 (335)
T ss_dssp CCCTTCEECCSTT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TC
T ss_pred eeccCceecccCc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc---CC
Confidence 9999998764322 223345799999999999999999999999999999999999999976543332221111 11
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. .+......+.+++.+||+.||++||++.|+++
T Consensus 258 ~~------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 258 YS------------IPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CC------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CC------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 11122357889999999999999999999996
No 162
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.8e-39 Score=350.57 Aligned_cols=252 Identities=19% Similarity=0.328 Sum_probs=205.9
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCC-------cEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAG-------EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE 708 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 708 (969)
++|+..+.||+|+||.||+|++..++ ..||+|++.... ....+.+.+|++++++++||||+++++++.++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 57888999999999999999987666 479999985432 23356799999999999999999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
+..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK------------NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIRE 149 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG------------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEEC
T ss_pred CCCEEEEECCCCCCHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecC
Confidence 99999999999999999998654 2488999999999999999999998 99999999999999988
Q ss_pred Cc--------EEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCc
Q 002085 789 FK--------AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEH 859 (969)
Q Consensus 789 ~~--------~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~ 859 (969)
+. +||+|||++..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 87 99999999865421 123457899999999987 6789999999999999999997776665433
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 860 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
....... ....... .. ..+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 224 ~~~~~~~---~~~~~~~--------~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 224 SQRKLQF---YEDRHQL--------PA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHHHHHH---HHTTCCC--------CC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hHHHHHH---hhccCCC--------CC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 2221111 1111110 11 112467899999999999999999999999999974
No 163
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=352.33 Aligned_cols=268 Identities=25% Similarity=0.305 Sum_probs=206.5
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh--cHHHHHHHHHHHHHHhccc---cCceeeEEEEEEcC
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL--NQKLEKEFIAEIEILGTIR---HANIVKLWCCISSE 708 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 708 (969)
+.++|+..++||+|+||+||+|++..+++.||||++...... .......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999999889999999998643211 1111245667777777764 99999999999775
Q ss_pred C-----ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcE
Q 002085 709 N-----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 783 (969)
Q Consensus 709 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Ni 783 (969)
. ..++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-----------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Ni 151 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-----------PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENI 151 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-----------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHE
Confidence 5 4799999997 699999986542 3489999999999999999999998 999999999999
Q ss_pred EECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 784 LLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 784 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
+++.++.+||+|||+++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.......
T Consensus 152 l~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 228 (308)
T 3g33_A 152 LVTSGGTVKLADFGLARIYSY---QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 228 (308)
T ss_dssp EECTTSCEEECSCSCTTTSTT---CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH
T ss_pred EEcCCCCEEEeeCccccccCC---CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999986532 22334567899999999999999999999999999999999999999877665554
Q ss_pred HHHHHHhhccCC--chh-------hhccCCCC---cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 864 EWAWRHYAEEKP--ITD-------ALDKGIAE---PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 864 ~~~~~~~~~~~~--~~~-------~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..+......... ... ........ ....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 229 GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 444333221110 000 00000000 001123467889999999999999999999985
No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=359.46 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=208.3
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhc-----HHHHHHHHHHHHHHhccccCceeeEEEEE
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN-----QKLEKEFIAEIEILGTIRHANIVKLWCCI 705 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 705 (969)
...+.++|+..+.||+|+||.||+|++..+++.||||++....... ....+.+.+|++++++++||||+++++++
T Consensus 19 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp TTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred CcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3456788999999999999999999999999999999997543211 11234677899999999999999999999
Q ss_pred EcCCceEEEEeeccCC-CHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 706 SSENSKLLVYEYMENQ-SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 706 ~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
.+.+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~-------------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 162 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHP-------------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIV 162 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEE
Confidence 9999999999999776 9999998654 389999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
++.++.+||+|||+++..... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||......
T Consensus 163 l~~~~~~kL~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--- 236 (335)
T 3dls_A 163 IAEDFTIKLIDFGSAAYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--- 236 (335)
T ss_dssp ECTTSCEEECCCTTCEECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---
T ss_pred EcCCCcEEEeecccceECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---
Confidence 999999999999999876432 22334579999999999988877 78999999999999999999999652110
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 864 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
...... .+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ----------------~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----------------VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----------------TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----------------HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111 111123678999999999999999999999984
No 165
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.1e-39 Score=359.23 Aligned_cols=273 Identities=27% Similarity=0.357 Sum_probs=214.3
Q ss_pred cCCCccceeeecCcEEEEEEE----EcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE--cCC
Q 002085 636 SSLTESNLIGSGGSGQVYRID----INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS--SEN 709 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~ 709 (969)
++|+..+.||+|+||.||+|+ ...+++.||||++... .....+.+.+|++++++++||||+++++++. +..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 578999999999999999999 4567899999998653 3344577999999999999999999999886 455
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~ 164 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR------------ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEA 164 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG------------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred eEEEEEeecCCCCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCC
Confidence 6899999999999999998643 2489999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCCc-cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH-
Q 002085 790 KAKIADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW- 867 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~- 867 (969)
.+||+|||+++......... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||.............
T Consensus 165 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~ 244 (327)
T 3lxl_A 165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE 244 (327)
T ss_dssp EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC--
T ss_pred CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc
Confidence 99999999998765432222 2234568889999999999999999999999999999999999986532211000000
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
..........+....+...+.+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 245 RDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp --CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred cccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00000001112222222333344455789999999999999999999999999999863
No 166
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-39 Score=349.36 Aligned_cols=258 Identities=21% Similarity=0.329 Sum_probs=207.6
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCc---EEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce-E
Q 002085 637 SLTESNLIGSGGSGQVYRIDINGAGE---FVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK-L 712 (969)
Q Consensus 637 ~~~~~~~lG~G~~g~Vy~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~ 712 (969)
.|...++||+|+||+||+|.+..+++ .||+|++... ......+.+.+|++++++++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 45567899999999999999755444 7999998543 2344567899999999999999999999999876655 9
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+.+++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 100 ~v~e~~~~~~L~~~~~~~~------------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~k 164 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ------------RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVK 164 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT------------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEE
T ss_pred EEEecccCCCHHHHHhccc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 9999999999999998643 2478999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCC--CCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCC-CccchHHHHHHH
Q 002085 793 IADFGLAKMLAKQG--EPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD-EHTSLAEWAWRH 869 (969)
Q Consensus 793 l~Dfgla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~-~~~~~~~~~~~~ 869 (969)
|+|||+++.+.... .........+++.|+|||.+.+..++.++||||+||++|||++|+.|++.. +.......+...
T Consensus 165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 3pls_A 165 VADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244 (298)
T ss_dssp ECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTT
T ss_pred eCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcC
Confidence 99999998653321 112233456789999999999999999999999999999999977776544 333332222111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
...+.+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 245 --------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 245 --------------RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp --------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------------CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111112223467899999999999999999999999998875
No 167
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.4e-39 Score=346.47 Aligned_cols=258 Identities=26% Similarity=0.328 Sum_probs=204.4
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++.+.|...++||+|+||.||+|+...+++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 95 (285)
T 3is5_A 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNM 95 (285)
T ss_dssp SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeE
Confidence 3456789999999999999999999999999999999865432 22346789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE---CCC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---DSE 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~ 788 (969)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.+
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~ 163 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQA---------RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPH 163 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHH---------HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTT
T ss_pred EEEEEeCCCCcHHHHHHhhhh---------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCC
Confidence 999999999999999865421 013488999999999999999999998 99999999999999 455
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+.+||+|||+++.+... .......||+.|+|||.+. ..++.++||||+||++|||++|+.||.+............
T Consensus 164 ~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~ 239 (285)
T 3is5_A 164 SPIKIIDFGLAELFKSD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239 (285)
T ss_dssp CCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCEEEEeeecceecCCc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc
Confidence 78999999999865432 2234457899999999875 5689999999999999999999999987654433322211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
...... . .....+..+.+++.+||+.||++|||+.|+++
T Consensus 240 ---~~~~~~-~--------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 240 ---KEPNYA-V--------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CCCCCC-C----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---CCcccc-c--------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111000 0 00012367889999999999999999999985
No 168
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5e-40 Score=360.12 Aligned_cols=263 Identities=27% Similarity=0.349 Sum_probs=189.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhc--cccCceeeEEEEEEcCC---
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT--IRHANIVKLWCCISSEN--- 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~--- 709 (969)
.++|+..+.||+|+||.||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++.+..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 73 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred cceeeehhhccCCCCeEEEEEEE--cCcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence 35799999999999999999987 48889999985432 3567778888888 68999999999998766
Q ss_pred -ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhc--------ccCCCCeEecCCCC
Q 002085 710 -SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH--------HDCTPQIIHRDVKS 780 (969)
Q Consensus 710 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp 780 (969)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||
T Consensus 74 ~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp 136 (303)
T 3gxj_A 74 TQLWLVSDYHEHGSLFDYLNRY--------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKS 136 (303)
T ss_dssp EEEEEEEECCTTCCHHHHHHHC--------------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCG
T ss_pred ceeEEEEeccCCCCHHHHHhcc--------------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCH
Confidence 789999999999999999653 3778889999999999999999 66 999999999
Q ss_pred CcEEECCCCcEEEeecccceecccCCCCc--cccccccCcccCchhhcccC------CCCCccchhhHHHHHHHHHhC--
Q 002085 781 SNILLDSEFKAKIADFGLAKMLAKQGEPH--TMSAVAGSFGYFAPEYAYTT------KVNEKIDIYSFGVVLLELVTG-- 850 (969)
Q Consensus 781 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg-- 850 (969)
+||+++.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 137 ~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~ 216 (303)
T 3gxj_A 137 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216 (303)
T ss_dssp GGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBC
T ss_pred HHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCC
Confidence 99999999999999999998765432221 12334799999999998876 344689999999999999999
Q ss_pred --------CCCCCCCCccc-hHHHHHHHhhccCCchhhhccCCCC-cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 851 --------KEANYGDEHTS-LAEWAWRHYAEEKPITDALDKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 851 --------~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
..||....... ............. ..+.... ....+.+..+.+++.+||+.||++|||+.|+++.
T Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 291 (303)
T 3gxj_A 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp BTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred CccccceeeccccccCCCCccHHHHHHHHHHhh-----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 56664421110 0000001111000 0011111 1123566789999999999999999999999999
Q ss_pred HhhcCCC
Q 002085 921 LRRCCPT 927 (969)
Q Consensus 921 L~~~~~~ 927 (969)
|+++...
T Consensus 292 L~~l~~~ 298 (303)
T 3gxj_A 292 LSQLSQQ 298 (303)
T ss_dssp HHC-CCC
T ss_pred HHHhhhh
Confidence 9999754
No 169
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.7e-39 Score=349.45 Aligned_cols=258 Identities=25% Similarity=0.354 Sum_probs=207.6
Q ss_pred cCCCccc-eeeecCcEEEEEEEE--cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 636 SSLTESN-LIGSGGSGQVYRIDI--NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 636 ~~~~~~~-~lG~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
++|+..+ .||+|+||.||+|.+ ..+++.||||+++... ......+.+.+|+++++.++||||+++++++ +.+..+
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 4677777 999999999999954 5567899999986543 2334467899999999999999999999999 567789
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 94 lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 157 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-------------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAK 157 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred EEEEeCCCCCHHHHHHhCc-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEE
Confidence 9999999999999998643 388999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCc-cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 793 IADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
|+|||+++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.+.........+.
T Consensus 158 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--- 234 (291)
T 1xbb_A 158 ISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE--- 234 (291)
T ss_dssp ECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---
T ss_pred EccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---
Confidence 99999998764432221 1223456789999999998889999999999999999999 999987765443322221
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
... ....+...+..+.+++.+||+.||++||++.|+++.|+++-
T Consensus 235 -~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 235 -KGE----------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp -TTC----------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -cCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 11122233467999999999999999999999999998874
No 170
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.6e-39 Score=345.51 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=210.4
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|.+. +++.||+|++...... .+.+.+|++++++++||||+++++++.+++..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 57888999999999999999986 5778999999654321 357899999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 83 e~~~~~~L~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR------------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp CCCTTCBHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECC
T ss_pred eCCCCCcHHHHHhhCc------------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcc
Confidence 9999999999998653 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... .........+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...........+.. ..
T Consensus 148 fg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~----~~ 222 (267)
T 3t9t_A 148 FGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST----GF 222 (267)
T ss_dssp TTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT----TC
T ss_pred cccccccccc-cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc----CC
Confidence 9999865321 1112234457889999999999999999999999999999999 7888876554333322211 10
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 223 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 223 ----------RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp ----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01111222467899999999999999999999999998874
No 171
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.4e-38 Score=357.47 Aligned_cols=257 Identities=23% Similarity=0.364 Sum_probs=209.9
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccch-----hcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-----LNQKLEKEFIAEIEILGTI-RHANIVKLWCCIS 706 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 706 (969)
.+.++|+..+.||+|+||.||+|.+..+|+.||||++..... ......+.+.+|+++++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 456789999999999999999999988899999999865431 1123356789999999999 7999999999999
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
.....|+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~-------------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKV-------------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999997543 388999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhccc------CCCCCccchhhHHHHHHHHHhCCCCCCCCCcc
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 860 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~il~elltg~~p~~~~~~~ 860 (969)
.++.+||+|||++..+... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 235 ~~~~ikl~DfG~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 311 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311 (365)
T ss_dssp TTCCEEECCCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred CCCCEEEEecCcccccCCC---cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH
Confidence 9999999999999876432 22345679999999999863 35888999999999999999999999875543
Q ss_pred chHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 861 SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.....+... .... ..+.....+..+.+++.+||+.||++||++.|+++
T Consensus 312 ~~~~~i~~~---~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 LMLRMIMEG---QYQF--------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHHT---CCCC--------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhC---CCCC--------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 333222111 0000 00001122367899999999999999999999986
No 172
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.1e-39 Score=346.38 Aligned_cols=260 Identities=22% Similarity=0.298 Sum_probs=208.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---HHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|++..+++.||+|+++....... ...+.+.+|++++++++||||+++++++.++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 3568899999999999999999998999999999865432211 1256799999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC--
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-- 789 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-- 789 (969)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 147 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-------------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVP 147 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSS
T ss_pred EEEEeecCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCC
Confidence 99999999999999997543 388999999999999999999998 999999999999999887
Q ss_pred --cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 790 --KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 790 --~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
.+||+|||++...... .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||.+.........+.
T Consensus 148 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 224 (283)
T 3bhy_A 148 NPRIKLIDFGIAHKIEAG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224 (283)
T ss_dssp SCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred CCceEEEecccceeccCC---CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhH
Confidence 8999999999876432 22334568999999999999999999999999999999999999998765433222111
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 924 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~ 924 (969)
....... .......+..+.+++.+||+.||++||++.|+++ .++..
T Consensus 225 ---~~~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 225 ---AVNYDFD--------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp ---TTCCCCC--------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred ---hcccCCc--------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 1111000 0011122367889999999999999999999997 44444
No 173
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-38 Score=356.69 Aligned_cols=262 Identities=24% Similarity=0.261 Sum_probs=208.0
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-----cCceeeEEEEEEcC
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-----HANIVKLWCCISSE 708 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~ 708 (969)
+.++|++.++||+|+||.||+|++..+++.||||++... ....+.+..|+++++.++ ||||+++++++...
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~ 108 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY 108 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence 346899999999999999999999989999999998532 234566788999999986 99999999999999
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC-
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS- 787 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~- 787 (969)
+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 109 ~~~~lv~e~~-~~~L~~~~~~~~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 109 DHMCLIFEPL-GPSLYEIITRNNY-----------NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp TEEEEEECCC-CCBHHHHHHHTTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred CeeEEEEcCC-CCCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999999999 8999999986542 3488999999999999999999988 9999999999999986
Q ss_pred ------------------------CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHH
Q 002085 788 ------------------------EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVV 843 (969)
Q Consensus 788 ------------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~i 843 (969)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 78999999999986432 2234578999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccchHHHHHHHhhccCC----------chhhhcc-----CCCCc----------------ccHHH
Q 002085 844 LLELVTGKEANYGDEHTSLAEWAWRHYAEEKP----------ITDALDK-----GIAEP----------------CYLEE 892 (969)
Q Consensus 844 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-----~~~~~----------------~~~~~ 892 (969)
+|||++|+.||.+.+.......+......... ....... ..... .....
T Consensus 249 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 328 (360)
T 3llt_A 249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK 328 (360)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCC
T ss_pred HHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccch
Confidence 99999999999876654443333222111000 0000000 00000 00001
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 893 MTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 893 ~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
...+.+++.+||+.||++|||++|+++
T Consensus 329 ~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 329 HELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 256789999999999999999999975
No 174
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.1e-39 Score=352.22 Aligned_cols=266 Identities=20% Similarity=0.308 Sum_probs=203.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcC---CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC--
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDING---AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN-- 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 709 (969)
.++|...+.||+|+||.||+|.... +++.||+|+++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3578889999999999999998764 456899999865432 3444678999999999999999999999997754
Q ss_pred ---ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 710 ---SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 710 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~ 181 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLE-------TGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLR 181 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBT-------TSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEEC
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhh-------cCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEc
Confidence 359999999999999999643211 0124589999999999999999999988 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 865 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~ 865 (969)
.++.+||+|||+++.+.............+++.|+|||.+.+..++.++||||||+++|||++ |..||.+.........
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 261 (313)
T 3brb_A 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY 261 (313)
T ss_dssp TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence 999999999999987654333333344567889999999999999999999999999999999 7788876655544433
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 866 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+.... ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 262 ~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 262 LLHGH--------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp HHTTC--------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCC--------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22111 11122233467899999999999999999999999998874
No 175
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=354.84 Aligned_cols=269 Identities=17% Similarity=0.192 Sum_probs=204.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcC---CCcEEEEEEEeccchhcH--------HHHHHHHHHHHHHhccccCceeeEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDING---AGEFVAVKRIWNNRKLNQ--------KLEKEFIAEIEILGTIRHANIVKLWC 703 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~ 703 (969)
.++|+..+.||+|+||.||+|.+.. ++..||||++........ .....+.+|+.+++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3579999999999999999999986 778999999865432111 11234778889999999999999999
Q ss_pred EEEc----CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCC
Q 002085 704 CISS----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 779 (969)
Q Consensus 704 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 779 (969)
++.+ ....|+||||+ +++|.+++.... .+++..++.++.|++.||+|||+. +|+|||||
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 178 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-------------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIK 178 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-------------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcC
Confidence 9887 67889999999 999999998643 389999999999999999999998 99999999
Q ss_pred CCcEEECCCC--cEEEeecccceecccCCCC-----ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCC
Q 002085 780 SSNILLDSEF--KAKIADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKE 852 (969)
Q Consensus 780 p~Nill~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~ 852 (969)
|+||+++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 179 p~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~ 258 (345)
T 2v62_A 179 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKL 258 (345)
T ss_dssp GGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999887 9999999999876543221 11244579999999999999999999999999999999999999
Q ss_pred CCCCCCcc-chHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 853 ANYGDEHT-SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 853 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
||.+.... .............. ......... ....+..+.+++.+||+.||++||++.++++.|++..
T Consensus 259 pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 259 PWEQNLKDPVAVQTAKTNLLDEL--PQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHTT--THHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred CccccccccHHHHHHHHhhcccc--cHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 99653222 11122222221111 111111000 0022367899999999999999999999999999875
No 176
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.3e-38 Score=348.58 Aligned_cols=267 Identities=27% Similarity=0.394 Sum_probs=208.8
Q ss_pred cCCCccceeeecCcEEEEEEE----EcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC--C
Q 002085 636 SSLTESNLIGSGGSGQVYRID----INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE--N 709 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 709 (969)
+.|+..+.||+|+||.||+|+ ...+++.||||++..... ....+.+.+|++++++++||||+++++++.+. .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 458889999999999999999 456789999999865432 22346789999999999999999999999876 6
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~ 163 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK------------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 163 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT------------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred eEEEEEEeCCCCcHHHHHHhcc------------ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCC
Confidence 6899999999999999996543 2488999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
.+||+|||+++.+...... .......||..|+|||.+.+..++.++||||+||++|||++|+.|+..... ....
T Consensus 164 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~ 238 (302)
T 4e5w_A 164 QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA-----LFLK 238 (302)
T ss_dssp EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-----HHHH
T ss_pred CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh-----HHhh
Confidence 9999999999877543222 223345688899999999999999999999999999999999988542110 0000
Q ss_pred Hhhc------cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002085 869 HYAE------EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 924 (969)
Q Consensus 869 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 924 (969)
.... ..............+.+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 239 MIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 0000 0001111122222233334457899999999999999999999999999875
No 177
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.7e-38 Score=372.89 Aligned_cols=264 Identities=26% Similarity=0.349 Sum_probs=212.0
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH----------HHHHHHHHHHHHHhccccCceee
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ----------KLEKEFIAEIEILGTIRHANIVK 700 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~ 700 (969)
...+.++|++.++||+|+||+||+|++..+++.||||++........ ...+.+.+|++++++++||||++
T Consensus 31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 110 (504)
T 3q5i_A 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK 110 (504)
T ss_dssp CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 34567889999999999999999999999999999999965432211 23467999999999999999999
Q ss_pred EEEEEEcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCC
Q 002085 701 LWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 780 (969)
Q Consensus 701 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 780 (969)
+++++.+++..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||
T Consensus 111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp 174 (504)
T 3q5i_A 111 LFDVFEDKKYFYLVTEFYEGGELFEQIINRH-------------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKP 174 (504)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHHS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred EEEEEEcCCEEEEEEecCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcH
Confidence 9999999999999999999999999997643 389999999999999999999998 999999999
Q ss_pred CcEEECCCC---cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCC
Q 002085 781 SNILLDSEF---KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGD 857 (969)
Q Consensus 781 ~Nill~~~~---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~ 857 (969)
+||+++.++ .+||+|||+++.+... .......||+.|+|||++. +.++.++||||+||++|+|++|..||.+.
T Consensus 175 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 175 ENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp GGEEESSTTCCSSEEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEEecCCCCccEEEEECCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999876 6999999999876432 2334567999999999987 46999999999999999999999999876
Q ss_pred CccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 002085 858 EHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 925 (969)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~~ 925 (969)
........+... .... ..+.....+..+.+++.+||+.||++|||+.|+++ .+++..
T Consensus 251 ~~~~~~~~i~~~---~~~~--------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 251 NDQDIIKKVEKG---KYYF--------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp SHHHHHHHHHHC---CCCC--------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred CHHHHHHHHHcC---CCCC--------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence 654443333221 0000 00011122467899999999999999999999985 455543
No 178
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5e-39 Score=375.93 Aligned_cols=261 Identities=24% Similarity=0.328 Sum_probs=215.9
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
.+.++|+..++||+|+||.||+|++..+|+.||||++...........+.+.+|++++++++||||+++++++.+.+..|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45568999999999999999999999999999999996554333344578999999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE---CCCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---DSEF 789 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~ 789 (969)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++
T Consensus 103 lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 166 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRK-------------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDA 166 (484)
T ss_dssp EEECCCCSCBHHHHHHTCS-------------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTC
T ss_pred EEEecCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCC
Confidence 9999999999999997654 388999999999999999999998 99999999999999 5678
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
.+||+|||+++.+... .......||+.|+|||++.+ .++.++||||+||++|||++|..||.+.........+...
T Consensus 167 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~ 242 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEAS---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242 (484)
T ss_dssp CEEECCTTHHHHBCCC---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred cEEEEeeeeeEEcccc---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 9999999999876432 23344579999999999876 6999999999999999999999999876654443333221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 924 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~ 924 (969)
. . ....+.+...+..+.+++.+||+.||++|||+.|+++ .++..
T Consensus 243 ~---~--------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 243 K---Y--------TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp C---C--------CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred C---C--------CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 0 0 0111222334577899999999999999999999995 45444
No 179
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-38 Score=349.84 Aligned_cols=268 Identities=27% Similarity=0.347 Sum_probs=203.7
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc--ccCceeeEEEEEEcC-
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI--RHANIVKLWCCISSE- 708 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~- 708 (969)
..+.++|+..+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++.+.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 345678999999999999999999985 8899999985432 23445566666655 899999999999876
Q ss_pred ---CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC-----CCCeEecCCCC
Q 002085 709 ---NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC-----TPQIIHRDVKS 780 (969)
Q Consensus 709 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp 780 (969)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp 170 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST--------------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC--------------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCG
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccch
Confidence 6789999999999999999753 3889999999999999999999652 33899999999
Q ss_pred CcEEECCCCcEEEeecccceecccCCCCc--cccccccCcccCchhhcccCCCCCc------cchhhHHHHHHHHHhC--
Q 002085 781 SNILLDSEFKAKIADFGLAKMLAKQGEPH--TMSAVAGSFGYFAPEYAYTTKVNEK------IDIYSFGVVLLELVTG-- 850 (969)
Q Consensus 781 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslG~il~elltg-- 850 (969)
+||+++.++.+||+|||+++.+....... ......||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 171 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~ 250 (337)
T 3mdy_A 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV 250 (337)
T ss_dssp GGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence 99999999999999999998764432221 1234579999999999988777665 9999999999999999
Q ss_pred --------CCCCCCCCccch-HHHHHHHhhccCCchhhhccCCCC-cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 851 --------KEANYGDEHTSL-AEWAWRHYAEEKPITDALDKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 851 --------~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
..||........ ........ ..... .+.... ....+.+..+.+++.+||+.||++||++.|+++.
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 251 SGGIVEEYQLPYHDLVPSDPSYEDMREIV-CIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHHH-TTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccccccccccHhhhcCCCCchhhhHHHH-hhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 556544322111 11111111 11110 111111 1123667889999999999999999999999999
Q ss_pred HhhcCC
Q 002085 921 LRRCCP 926 (969)
Q Consensus 921 L~~~~~ 926 (969)
|+++..
T Consensus 326 L~~l~~ 331 (337)
T 3mdy_A 326 LAKMSE 331 (337)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998863
No 180
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.8e-39 Score=355.07 Aligned_cols=269 Identities=20% Similarity=0.264 Sum_probs=200.4
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
.....++|+..++||+|+||+||+|.+..+++.||||++..... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR 107 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence 34557789999999999999999999999999999999865432 33345678899999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC----
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD---- 786 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~---- 786 (969)
.++||||++ |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 108 ~~lv~e~~~-~~L~~~~~~~~-------------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 108 LHLIFEYAE-NDLKKYMDKNP-------------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp EEEEEECCS-EEHHHHHHHCT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred EEEEEecCC-CCHHHHHhhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 999999998 59999998654 388999999999999999999998 999999999999994
Q ss_pred -CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 787 -SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 787 -~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
+++.+||+|||+++.+... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+........
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 248 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248 (329)
T ss_dssp --CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CccceEEECcCCCccccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH
Confidence 4556999999999876432 2223445689999999999875 48999999999999999999999998766544433
Q ss_pred HHHHHhhccCC--chhhh--------ccCCCCcc-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKP--ITDAL--------DKGIAEPC-----YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~--~~~~~--------~~~~~~~~-----~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+......... ..... .+...... .......+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 249 KIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 33322211100 00000 00000000 0112367889999999999999999999874
No 181
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-38 Score=343.40 Aligned_cols=251 Identities=25% Similarity=0.317 Sum_probs=201.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|++.+.||+|+||.||+|++..+++.||||++...........+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 46899999999999999999999989999999998654332333456889999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 90 ~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~ 153 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-------------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIA 153 (276)
T ss_dssp EECCCSCBHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEEC
T ss_pred EeccCCCcHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEe
Confidence 99999999999997643 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||++...... .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||...........+.. .
T Consensus 154 dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~ 226 (276)
T 2h6d_A 154 DFGLSNMMSDG---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG----G 226 (276)
T ss_dssp CCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----C
T ss_pred ecccccccCCC---cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc----C
Confidence 99999865332 22234568999999999987765 5899999999999999999999976544333222211 1
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. ..+...+..+.+++.+||+.||++||++.|+++
T Consensus 227 ~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 227 VF-----------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp CC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cc-----------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 10 011122367889999999999999999999997
No 182
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-38 Score=366.98 Aligned_cols=356 Identities=20% Similarity=0.201 Sum_probs=279.2
Q ss_pred CCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEe
Q 002085 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCID 151 (969)
Q Consensus 72 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 151 (969)
..+++.|+++++.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|.+++. | ++.+++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 35799999999999975 4 799999999999999999974 4 89999999999999999974 4 89999999999
Q ss_pred cCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcc
Q 002085 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL 231 (969)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l 231 (969)
|++|++++ +| ++.+++|++|++++|++++. + ++.+++|++|++++|+. .+.+ .++.+++|+.|++++|++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~--~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKK--ITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSC--CCCC--CCTTCTTCCEEECCSSCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCc--cccc--ccccCCcCCEEECCCCcc
Confidence 99999996 55 89999999999999999974 3 89999999999999962 2233 588999999999999999
Q ss_pred cccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhh-cccccccccCccccccCCccc
Q 002085 232 IGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA-LKLTDIDLSMNNLTGSIPEEF 310 (969)
Q Consensus 232 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~Ls~N~l~~~~p~~~ 310 (969)
.+ +| +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +.. .+|+.|++++|++++.. +
T Consensus 183 ~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~ 250 (457)
T 3bz5_A 183 TE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---V 250 (457)
T ss_dssp CC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---C
T ss_pred ce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---H
Confidence 88 45 88999999999999999975 38889999999999999997 45 444 37999999999999764 4
Q ss_pred cCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCc
Q 002085 311 GKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNT 390 (969)
Q Consensus 311 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 390 (969)
+.+++|+.|++++|++ +.|++++|++.+.+| +..+++|+.|++++|.
T Consensus 251 ~~l~~L~~L~l~~n~L-------------------------------~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~ 297 (457)
T 3bz5_A 251 STLSKLTTLHCIQTDL-------------------------------LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNT 297 (457)
T ss_dssp TTCTTCCEEECTTCCC-------------------------------SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCT
T ss_pred HHCCCCCEEeccCCCC-------------------------------CEEECCCCccCCccc--ccccccCCEEECCCCc
Confidence 5567777777766544 345566666555554 3455666666666666
Q ss_pred cccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccc
Q 002085 391 ISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIV 470 (969)
Q Consensus 391 l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 470 (969)
+.+.+|. ...+|+.|++++| ++|++|++++|+|++. + ++.+++|+.|++++|+|++
T Consensus 298 ~l~~l~~-~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~------- 353 (457)
T 3bz5_A 298 QLYLLDC-QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD------- 353 (457)
T ss_dssp TCCEEEC-TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-------
T ss_pred ccceecc-CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC-------
Confidence 6555553 2234444444433 5677777777777763 2 7777788888888888774
Q ss_pred cccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCccccc
Q 002085 471 SWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 520 (969)
Q Consensus 471 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l 520 (969)
++.|..|++++|+++|. +++..|..+|+++|+|+|.||+.+...
T Consensus 354 -l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~~ 397 (457)
T 3bz5_A 354 -FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLDQ 397 (457)
T ss_dssp -CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBCT
T ss_pred -ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhcc
Confidence 24566667888888765 456777888888888888888776443
No 183
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.6e-38 Score=371.96 Aligned_cols=256 Identities=24% Similarity=0.311 Sum_probs=206.5
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
..+.+.|+..++||+|+||+||+|++..+++.||+|++...... ......+.+|+++++.++||||+++++++.+.+..
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 111 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY 111 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 34566899999999999999999999999999999998654322 22246789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC---
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE--- 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~--- 788 (969)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++..
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 175 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRM-------------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKD 175 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTT
T ss_pred EEEEecCCCCcHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCC
Confidence 99999999999999987643 388999999999999999999998 99999999999999764
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+.+||+|||+++.+... .......||+.|+|||++. ..++.++||||+||++|||++|..||.+.........+..
T Consensus 176 ~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 251 (494)
T 3lij_A 176 ALIKIVDFGLSAVFENQ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251 (494)
T ss_dssp CCEEECCCTTCEECBTT---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CcEEEEECCCCeECCCC---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 45999999999876432 2334567999999999886 5699999999999999999999999987665444433322
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.... ...+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~-----------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 252 GKYT-----------FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TCCC-----------CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCC-----------CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1100 011112233467889999999999999999999985
No 184
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.8e-39 Score=352.92 Aligned_cols=273 Identities=24% Similarity=0.360 Sum_probs=215.3
Q ss_pred ccCCCccceeeecCcEEEEEEEE-----cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDI-----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSE 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 708 (969)
.++|+..+.||+|+||.||+|++ ..+++.||||++.... .....+.+.+|+++++++ +||||+++++++...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 46899999999999999999985 3467899999996543 334457899999999999 799999999998775
Q ss_pred C-ceEEEEeeccCCCHHHHhccCcCcccc---CCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 709 N-SKLLVYEYMENQSLDRWLHGRKRSLVS---GSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 709 ~-~~~lv~e~~~~gsL~~~l~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
+ ..++||||+++++|.+++......... .........+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil 180 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 180 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEE
Confidence 4 589999999999999999875532110 00111223488999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchH
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLA 863 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~ 863 (969)
++.++.+||+|||+++.+.............||+.|+|||++.+..++.++||||+||++|||++ |..||.+.......
T Consensus 181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 260 (316)
T 2xir_A 181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260 (316)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence 99999999999999987655444444455678899999999999999999999999999999998 88888765433211
Q ss_pred HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ........ ...+...+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 261 ~---~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 261 C---RRLKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp H---HHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H---HHhccCcc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 11111110 1111223367899999999999999999999999998875
No 185
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=345.47 Aligned_cols=258 Identities=24% Similarity=0.345 Sum_probs=210.2
Q ss_pred cCCCccc-eeeecCcEEEEEEEEc--CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 636 SSLTESN-LIGSGGSGQVYRIDIN--GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 636 ~~~~~~~-~lG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
++|.+.+ .||+|+||.||+|.+. .++..||||+++... .....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 3455555 8999999999999864 467889999996542 345567899999999999999999999999 456789
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 86 lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~k 150 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR------------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAK 150 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT------------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEE
T ss_pred EEEEeCCCCCHHHHHHhCC------------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEE
Confidence 9999999999999997543 3488999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCc-cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 793 IADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
|+|||+++......... ......+|+.|+|||.+.+..++.++||||+||++|||++ |+.||...........+..
T Consensus 151 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-- 228 (287)
T 1u59_A 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-- 228 (287)
T ss_dssp ECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT--
T ss_pred ECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc--
Confidence 99999998764432221 2233457899999999998899999999999999999998 9999977655443332211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 229 --~~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 229 --GK----------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp --TC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC----------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 11122234478999999999999999999999999998885
No 186
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.8e-39 Score=345.72 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=208.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcC---CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDING---AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|.+.. ++..||+|++.... .....+.+.+|++++++++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence 3578899999999999999998753 34569999986542 33446789999999999999999999999865 457
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 152 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNK------------NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECV 152 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHT------------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEE
T ss_pred EEEEecCCCCCHHHHHHhcc------------ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcE
Confidence 89999999999999997643 2488999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||+++..... .........+++.|+|||.+.+..++.++||||||+++|||++ |+.||...........+....
T Consensus 153 kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~ 231 (281)
T 3cc6_A 153 KLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD 231 (281)
T ss_dssp EECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC
T ss_pred EeCccCCCcccccc-cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC
Confidence 99999999876432 2222334567889999999999999999999999999999998 999998766555443332211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. .+.+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 232 ~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 232 R--------------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp C--------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C--------------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 0 1111223367899999999999999999999999998874
No 187
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=347.07 Aligned_cols=254 Identities=29% Similarity=0.427 Sum_probs=199.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 57888999999999999999984 788999998543 234678999999999999999999998764 489999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc-EEEe
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK-AKIA 794 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~ 794 (969)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+....+|+||||||+||+++.++. +||+
T Consensus 79 e~~~~~~L~~~l~~~~~----------~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~ 148 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEP----------LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148 (307)
T ss_dssp ECCTTCBHHHHHHCSSS----------EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred EcCCCCCHHHHHhccCC----------CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence 99999999999986542 134788899999999999999999842239999999999999998886 7999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+......
T Consensus 149 Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~- 221 (307)
T 2eva_A 149 DFGTACDIQT-----HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-RIMWAVHNGT- 221 (307)
T ss_dssp CCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-HHHHHHHTTC-
T ss_pred cccccccccc-----ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-HHHHHHhcCC-
Confidence 9999976532 12234689999999999999999999999999999999999999975433221 1111111110
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..+.....+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 222 ----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 222 ----------RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp ----------CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred ----------CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11112223467889999999999999999999999998875
No 188
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-38 Score=347.90 Aligned_cols=259 Identities=25% Similarity=0.349 Sum_probs=204.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE-cCCce
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS-SENSK 711 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~ 711 (969)
..|+..++||+|+||.||+|.+..+ +..||+|.+... ......+.+.+|++++++++||||+++++++. .++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 4688889999999999999997543 336899988543 23455678999999999999999999999864 56678
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 167 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNET------------HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTV 167 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTT------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCE
T ss_pred EEEEeCCCCCCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCE
Confidence 99999999999999997543 2478999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCC--CccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCC-CCCccchHHHHHH
Q 002085 792 KIADFGLAKMLAKQGE--PHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANY-GDEHTSLAEWAWR 868 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~-~~~~~~~~~~~~~ 868 (969)
||+|||+++....... ........+|+.|+|||.+.+..++.++||||+|+++|||++|+.|++ .............
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~ 247 (298)
T 3f66_A 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247 (298)
T ss_dssp EECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT
T ss_pred EECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc
Confidence 9999999986643221 122334567889999999999999999999999999999999655544 4443333322211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. . ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 248 ~----~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 248 G----R----------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp T----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----C----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 0 11111222367899999999999999999999999999875
No 189
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.8e-39 Score=355.06 Aligned_cols=266 Identities=24% Similarity=0.321 Sum_probs=209.5
Q ss_pred ccCCCccceeeecCcEEEEEEE-----EcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC
Q 002085 635 LSSLTESNLIGSGGSGQVYRID-----INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 709 (969)
.++|+..+.||+|+||.||+|+ ...+++.||||++.... .......+.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 4689999999999999999998 44567899999985432 3444568999999999999999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC-
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE- 788 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~- 788 (969)
..|+||||+++++|.+++....... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRP------SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCS------SSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred CcEEEEecCCCCcHHHHHHhhcccc------cccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC
Confidence 9999999999999999998764311 1123588999999999999999999998 99999999999999954
Q ss_pred --CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHH
Q 002085 789 --FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 865 (969)
Q Consensus 789 --~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~ 865 (969)
..+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..||...........
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 257 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH
Confidence 4699999999986644333333445568999999999999999999999999999999998 8888876554333322
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 866 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+.. .. ....+...+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 258 ~~~----~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 258 VTS----GG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHT----TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hhc----CC----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 211 11 01112223467899999999999999999999999998875
No 190
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-38 Score=360.34 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=199.0
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc--cCceeeEEEEEEcCCceEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR--HANIVKLWCCISSENSKLL 713 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 713 (969)
+.|++.+.||+|+||.||+|.+.. ++.||||++..... .....+.+.+|++++++++ ||||+++++++..++..|+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 459999999999999999999864 88999999865432 4455678999999999996 5999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||
T Consensus 134 v~E-~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl 195 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK-------------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKL 195 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS-------------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEE
T ss_pred EEe-cCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEE
Confidence 999 56899999998654 378889999999999999999988 999999999999996 579999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCccch
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 862 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 862 (969)
+|||+++.+.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 196 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-- 273 (390)
T 2zmd_A 196 IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-- 273 (390)
T ss_dssp CCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--
T ss_pred EecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH--
Confidence 99999987654333333445679999999999875 46889999999999999999999999754321
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
...+.... +.......+...+..+.+++.+||+.||++||++.|+++.
T Consensus 274 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 ISKLHAII----------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHHHHH----------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHh----------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111111 1111111111123678899999999999999999999863
No 191
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.4e-38 Score=353.14 Aligned_cols=265 Identities=27% Similarity=0.347 Sum_probs=208.9
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhc--cccCceeeEEEEEEcCC
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGT--IRHANIVKLWCCISSEN 709 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~ 709 (969)
..+.++|+..+.||+|+||.||+|++ +++.||||++.... .+.+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 34567899999999999999999998 58899999985432 3567788888887 68999999999998875
Q ss_pred ----ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhc--------ccCCCCeEecC
Q 002085 710 ----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH--------HDCTPQIIHRD 777 (969)
Q Consensus 710 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~D 777 (969)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+|||
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~D 172 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY--------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRD 172 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC--------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSC
T ss_pred CccceeEEEEeecCCCcHHHHHhcc--------------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCC
Confidence 789999999999999999753 3889999999999999999999 66 999999
Q ss_pred CCCCcEEECCCCcEEEeecccceecccCCCCc--cccccccCcccCchhhcccCC------CCCccchhhHHHHHHHHHh
Q 002085 778 VKSSNILLDSEFKAKIADFGLAKMLAKQGEPH--TMSAVAGSFGYFAPEYAYTTK------VNEKIDIYSFGVVLLELVT 849 (969)
Q Consensus 778 lkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~ellt 849 (969)
|||+||+++.++.+||+|||+++......... ......||+.|+|||++.+.. ++.++|||||||++|||++
T Consensus 173 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t 252 (342)
T 1b6c_B 173 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252 (342)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh
Confidence 99999999999999999999998765433221 234457999999999988763 3368999999999999999
Q ss_pred C----------CCCCCCCCccc-hHHHHHHHhhccCCchhhhccCCCC-cccHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002085 850 G----------KEANYGDEHTS-LAEWAWRHYAEEKPITDALDKGIAE-PCYLEEMTTVYRLALICTSTLPSSRPSMKEV 917 (969)
Q Consensus 850 g----------~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ev 917 (969)
| ..||....... ....+........ ..+.... ....+....+.+++.+||+.||++||++.|+
T Consensus 253 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 253 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccCcCCcccccccCccccCcCcccHHHHHHHHHHHH-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 9 67776543221 1111212111111 0111111 1123566789999999999999999999999
Q ss_pred HHHHhhcCC
Q 002085 918 LQILRRCCP 926 (969)
Q Consensus 918 l~~L~~~~~ 926 (969)
++.|+++..
T Consensus 328 ~~~L~~i~~ 336 (342)
T 1b6c_B 328 KKTLSQLSQ 336 (342)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998863
No 192
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-38 Score=372.38 Aligned_cols=262 Identities=25% Similarity=0.335 Sum_probs=213.3
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
..+.++|++.++||+|+||+||+|++..+++.||||++...... ......+.+|++++++++||||+++++++.+....
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 96 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEE
Confidence 45677899999999999999999999989999999998654322 22346789999999999999999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC---CC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD---SE 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~ 788 (969)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ .+
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 160 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRK-------------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKD 160 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTT
T ss_pred EEEEEcCCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCC
Confidence 99999999999999987644 388999999999999999999998 999999999999995 45
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+.+||+|||+++.+... .......||+.|+|||++.+ .++.++||||+||++|||++|..||.+.........+..
T Consensus 161 ~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 236 (486)
T 3mwu_A 161 CDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236 (486)
T ss_dssp CCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCEEEEECCcCeECCCC---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 67999999999865332 23345679999999999876 599999999999999999999999987665444333222
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 925 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~~ 925 (969)
.. . ....+.....+..+.+++.+||+.||++|||+.|+++ .+++..
T Consensus 237 ~~---~--------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 237 GK---Y--------AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp TC---C--------CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred CC---C--------CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 10 0 0111222334467899999999999999999999997 355543
No 193
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.6e-39 Score=348.81 Aligned_cols=262 Identities=23% Similarity=0.305 Sum_probs=211.4
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE--cCCceE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS--SENSKL 712 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 712 (969)
.++|+..+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|++++++++||||+++++++. .....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 4678999999999999999999999999999999965432 3445678999999999999999999999874 366889
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCC-----eEecCCCCCcEEECC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ-----IIHRDVKSSNILLDS 787 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlkp~Nill~~ 787 (969)
+||||+++++|.+++..... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~ 151 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTK---------ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDG 151 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHH---------TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECS
T ss_pred EEEeCCCCCCHHHHHHhhcc---------cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcC
Confidence 99999999999999986432 123489999999999999999999998 7 999999999999999
Q ss_pred CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 788 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
++.+||+|||.++..... ........|++.|+|||.+.+..++.++||||||+++|||++|+.||...........+.
T Consensus 152 ~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~ 229 (279)
T 2w5a_A 152 KQNVKLGDFGLARILNHD--TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229 (279)
T ss_dssp SSCEEECCCCHHHHC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CCCEEEecCchheeeccc--cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHh
Confidence 999999999999865332 122234568999999999999999999999999999999999999998765433332221
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. . ....+...+..+.+++.+||+.||++||++.|+++.+....
T Consensus 230 ~~----~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 230 EG----K----------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp HT----C----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred hc----c----------cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 11 1 00111223467899999999999999999999998765443
No 194
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=355.86 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=197.9
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcccc--CceeeEEEEEEcCCceEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIVKLWCCISSENSKLL 713 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l 713 (969)
+.|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+.+|++++++++| |||+++++++.+++..++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 46889999999999999999885 68899999986543 344556789999999999976 999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
|||| .+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||
T Consensus 87 v~e~-~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl 148 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLKKKK-------------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKL 148 (343)
T ss_dssp EECC-CSEEHHHHHHHSC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEE
T ss_pred EEeC-CCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEE
Confidence 9994 5789999998654 388999999999999999999998 999999999999997 578999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCccch
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 862 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 862 (969)
+|||+++.+.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 149 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-- 226 (343)
T 3dbq_A 149 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-- 226 (343)
T ss_dssp CCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--
T ss_pred eecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH--
Confidence 99999987654433333445679999999999865 67889999999999999999999999754321
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
....... .+.......+......+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~----------~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ISKLHAI----------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHHHH----------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHH----------hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111111 11111111122223578899999999999999999999864
No 195
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-39 Score=360.82 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=197.0
Q ss_pred CCCccceeeecCcEEEEEEEEcCC---CcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc-CCceE
Q 002085 637 SLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS-ENSKL 712 (969)
Q Consensus 637 ~~~~~~~lG~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 712 (969)
.|+..+.||+|+||.||+|.+..+ +..||||.++.. ......+.+.+|++++++++||||+++++++.+ ++..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 456678999999999999987533 346899988543 234456789999999999999999999998754 56789
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 168 lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~k 232 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNET------------HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVK 232 (373)
T ss_dssp EEEECCTTCBHHHHHHCTT------------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEE
T ss_pred EEEECCCCCCHHHHHhhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEE
Confidence 9999999999999997643 2478899999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCC--ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhC-CCCCCCCCccchHHHHHHH
Q 002085 793 IADFGLAKMLAKQGEP--HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTG-KEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg-~~p~~~~~~~~~~~~~~~~ 869 (969)
|+|||+++.+...... .......+|+.|+|||.+.+..++.++|||||||++|||++| ..||...........+...
T Consensus 233 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~ 312 (373)
T 3c1x_A 233 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 312 (373)
T ss_dssp ECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT
T ss_pred EeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC
Confidence 9999999866433211 122345678899999999999999999999999999999995 5555554444433322111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 313 ----~----------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 313 ----R----------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----C----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 11112223467899999999999999999999999999885
No 196
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.6e-38 Score=351.81 Aligned_cols=259 Identities=19% Similarity=0.267 Sum_probs=208.1
Q ss_pred hhhccCCCcc-ceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCC
Q 002085 632 SNILSSLTES-NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSEN 709 (969)
Q Consensus 632 ~~~~~~~~~~-~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 709 (969)
+++.+.|.+. +.||+|+||.||+|.+..+++.||+|++....... .....+.+|+.+++.+ .||||+++++++.+.+
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 3455667776 88999999999999999999999999987644322 2346789999999999 5799999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC--
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-- 787 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~-- 787 (969)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~ 168 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELA-----------EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIY 168 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBT
T ss_pred eEEEEEEecCCCcHHHHHHHhcc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCC
Confidence 99999999999999999865432 3589999999999999999999998 9999999999999998
Q ss_pred -CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 788 -EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 788 -~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
++.+||+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+
T Consensus 169 ~~~~~kL~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i 245 (327)
T 3lm5_A 169 PLGDIKIVDFGMSRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI 245 (327)
T ss_dssp TBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCCcEEEeeCccccccCCc---cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH
Confidence 789999999999876432 2233467999999999999999999999999999999999999999876544333222
Q ss_pred HHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.... . ..........+..+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~---~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 246 SQVN---V--------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHTC---C--------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Hhcc---c--------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1111 0 1111112233467889999999999999999999985
No 197
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.3e-38 Score=347.82 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=199.7
Q ss_pred hccCCCcc-ceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCce
Q 002085 634 ILSSLTES-NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSK 711 (969)
Q Consensus 634 ~~~~~~~~-~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 711 (969)
+.+.|++. ++||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 44578774 78999999999999998899999999986542 22346788999999985 799999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc-
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK- 790 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~- 790 (969)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 150 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRR-------------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQV 150 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSS
T ss_pred EEEEEcCCCCcHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCc
Confidence 99999999999999998643 388999999999999999999998 9999999999999998876
Q ss_pred --EEEeecccceecccCCCC-----ccccccccCcccCchhhccc-----CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 002085 791 --AKIADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYT-----TKVNEKIDIYSFGVVLLELVTGKEANYGDE 858 (969)
Q Consensus 791 --~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltg~~p~~~~~ 858 (969)
+||+|||+++.....+.. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..
T Consensus 151 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 151 SPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp CSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 999999999865432211 11223469999999999875 568899999999999999999999997654
Q ss_pred ccch-----------HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 859 HTSL-----------AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 859 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.... ............. ..........+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 231 GSDCGWDRGEACPACQNMLFESIQEGKY-------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CSCSCC----CCHHHHHHHHHHHHHCCC-------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccccccccccchhHHHHHHHHHhccCc-------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 3210 0111111111100 0000000112467899999999999999999999987
No 198
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.5e-39 Score=355.64 Aligned_cols=273 Identities=29% Similarity=0.388 Sum_probs=211.4
Q ss_pred hccCC-CccceeeecCcEEEEEEEE----cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC
Q 002085 634 ILSSL-TESNLIGSGGSGQVYRIDI----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE 708 (969)
Q Consensus 634 ~~~~~-~~~~~lG~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 708 (969)
+.++| +..++||+|+||.||++.+ ..+++.||||+++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence 34455 8899999999999988764 3468899999996542 345567899999999999999999999999874
Q ss_pred --CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 709 --NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 709 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
...++||||+++++|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~ 168 (318)
T 3lxp_A 106 GAASLQLVMEYVPLGSLRDYLPRH--------------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLD 168 (318)
T ss_dssp TTTEEEEEECCCTTCBHHHHGGGS--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred CCceEEEEEecccCCcHHHHHhhC--------------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEc
Confidence 5679999999999999999753 288999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
.++.+||+|||+++.+...... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||...........
T Consensus 169 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~ 248 (318)
T 3lxp_A 169 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248 (318)
T ss_dssp TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhh
Confidence 9999999999999877543222 123345688899999999999999999999999999999999999864321100000
Q ss_pred HH-HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 866 AW-RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 866 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.. ..........+.+......+.+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 249 GIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 00 0000000112222233333334445578999999999999999999999999998874
No 199
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6e-39 Score=356.06 Aligned_cols=266 Identities=24% Similarity=0.362 Sum_probs=206.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+|+.||||++.... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 568999999999999999999999999999999986543 3445567788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 103 ~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~ 166 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN-------------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLC 166 (331)
T ss_dssp EECCSEEHHHHHHHSTT-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EecCCcchHHHHHhhcc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEE
Confidence 99999999998876443 388999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc-
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE- 872 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~- 872 (969)
|||+++.+... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.........+......
T Consensus 167 Dfg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (331)
T 4aaa_A 167 DFGFARTLAAP--GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244 (331)
T ss_dssp CCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred eCCCceeecCC--ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 99999865432 2223345789999999998875 7899999999999999999999999876554333322221110
Q ss_pred ----------cCCchhhhccCCCCcc-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 ----------EKPITDALDKGIAEPC-----YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.........+...... ....+..+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000001111111 1123467999999999999999999998875
No 200
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.7e-39 Score=353.80 Aligned_cols=269 Identities=26% Similarity=0.364 Sum_probs=209.7
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEE--EEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFV--AVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~v--avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|++..++..+ |+|.+.... .....+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 468999999999999999999998888755 999886432 233456789999999999 899999999999999999
Q ss_pred EEEEeeccCCCHHHHhccCcCccccC---CCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSG---SSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~---~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
++||||+++++|.+++.......... ........+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999998653100000 0000123589999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 867 (969)
+.+||+|||+++.... ........+++.|+|||.+.+..++.++||||+||++|||++ |+.||.+.........
T Consensus 179 ~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~-- 253 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-- 253 (327)
T ss_dssp GCEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH--
T ss_pred CeEEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHH--
Confidence 9999999999874322 112233457889999999998889999999999999999998 9999977654332221
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.... .....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 254 --~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 254 --LPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp --GGGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hhcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111 111122233467899999999999999999999999998875
No 201
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-38 Score=348.82 Aligned_cols=258 Identities=25% Similarity=0.335 Sum_probs=210.5
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
.+.++|...+.||+|+||.||+|++..+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY 82 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE
Confidence 456789999999999999999999998999999999965322 22457889999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE---CCCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---DSEF 789 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~ 789 (969)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++
T Consensus 83 lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~ 146 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG-------------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENS 146 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTC
T ss_pred EEEEcCCCccHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCC
Confidence 9999999999999987543 388999999999999999999998 99999999999999 7788
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
.++|+|||+++.... .......||+.|+|||.+.+..++.++||||+||++|||++|..||...........+...
T Consensus 147 ~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 222 (304)
T 2jam_A 147 KIMITDFGLSKMEQN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEG 222 (304)
T ss_dssp CEEBCSCSTTCCCCC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHC
T ss_pred CEEEccCCcceecCC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 999999999875422 2223456899999999999999999999999999999999999999876544333332221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 924 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~ 924 (969)
.. . ...+.....+..+.+++.+||+.||++||++.|+++ .++..
T Consensus 223 ~~---~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 223 YY---E--------FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp CC---C--------CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred CC---C--------CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 10 0 011112233467899999999999999999999996 44443
No 202
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.9e-38 Score=343.39 Aligned_cols=258 Identities=24% Similarity=0.344 Sum_probs=210.7
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccch------hcHHHHHHHHHHHHHHhccc-cCceeeEEEE
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK------LNQKLEKEFIAEIEILGTIR-HANIVKLWCC 704 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~ 704 (969)
..+.++|+..+.||+|+||.||+|.+..+++.||||++..... ......+.+.+|+++++++. ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 3456789999999999999999999999999999999865431 12334577899999999995 9999999999
Q ss_pred EEcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 705 ISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 705 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
+.+.+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil 156 (298)
T 1phk_A 93 YETNTFFFLVFDLMKKGELFDYLTEKV-------------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENIL 156 (298)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred eccCCeEEEEEeccCCCcHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence 999999999999999999999998643 388999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcc------cCCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY------TTKVNEKIDIYSFGVVLLELVTGKEANYGDE 858 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~elltg~~p~~~~~ 858 (969)
++.++.+||+|||++...... .......|++.|+|||++. ...++.++||||+|+++|||++|+.||....
T Consensus 157 ~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 157 LDDDMNIKLTDFGFSCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp ECTTCCEEECCCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EcCCCcEEEecccchhhcCCC---cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 999999999999999876432 2233457899999999885 4568899999999999999999999997765
Q ss_pred ccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 859 HTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.......+... ... ...+.....+..+.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~---~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 234 QMLMLRMIMSG---NYQ--------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHHHT---CCC--------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhcC---Ccc--------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 43333222111 100 011112233467899999999999999999999876
No 203
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3e-38 Score=344.67 Aligned_cols=261 Identities=22% Similarity=0.232 Sum_probs=205.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEE-EcCCceE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCI-SSENSKL 712 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 712 (969)
+.++|+..+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++.++|++++..+.++ .+++..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 45689999999999999999999988999999998754322 24578899999999887766665554 6677889
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE---CCCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---DSEF 789 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~ 789 (969)
+||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++
T Consensus 82 lv~e~~-~~~L~~~~~~~~------------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~ 145 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS------------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGN 145 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTT
T ss_pred EEEEcc-CCCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCC
Confidence 999999 999999998543 2489999999999999999999998 99999999999999 7889
Q ss_pred cEEEeecccceecccCCCC-----ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH-
Q 002085 790 KAKIADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA- 863 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~- 863 (969)
.+||+|||+++........ .......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+.......
T Consensus 146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 4hgt_A 146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence 9999999999877543321 1223567999999999999999999999999999999999999999764433211
Q ss_pred --HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 864 --EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 864 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
..+...... .+. .... ...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 226 ~~~~~~~~~~~-~~~-~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 226 KYERISEKKMS-TPI-EVLC--------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHHHHHHHH-SCH-HHHT--------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhhhhhccccc-chh-hhhh--------ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 111111100 000 0000 112367899999999999999999999999998885
No 204
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=350.32 Aligned_cols=262 Identities=23% Similarity=0.304 Sum_probs=207.0
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE----cCCce
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS----SENSK 711 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~ 711 (969)
++|+..+.||+|+||.||+|+...+++.||||++... .....+.+.+|+++++.++||||+++++++. .....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 5799999999999999999999889999999988543 3345678999999999999999999999986 34478
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~ 173 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKD---------KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQP 173 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHT---------TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCE
Confidence 999999999999999986422 123589999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCc-------cccccccCcccCchhhcccCC---CCCccchhhHHHHHHHHHhCCCCCCCC--Cc
Q 002085 792 KIADFGLAKMLAKQGEPH-------TMSAVAGSFGYFAPEYAYTTK---VNEKIDIYSFGVVLLELVTGKEANYGD--EH 859 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~elltg~~p~~~~--~~ 859 (969)
||+|||+++......... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||... ..
T Consensus 174 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 253 (317)
T 2buj_A 174 VLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253 (317)
T ss_dssp EECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT
T ss_pred EEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc
Confidence 999999987653211110 112345799999999987654 688999999999999999999998531 11
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 860 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
..... ........+.....+..+.+++.+||+.||++||++.|+++.|+++.+
T Consensus 254 ~~~~~--------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 254 DSVAL--------------AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp SCHHH--------------HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred chhhH--------------HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 11111 111111111222334679999999999999999999999999999864
No 205
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.4e-38 Score=340.51 Aligned_cols=250 Identities=26% Similarity=0.340 Sum_probs=202.2
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc----CCce
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----ENSK 711 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 711 (969)
+.|+..+.||+|+||.||+|.+..++..||+|++..... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 457788899999999999999999999999999865432 44556789999999999999999999999865 3558
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCC--eEecCCCCCcEEEC-CC
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ--IIHRDVKSSNILLD-SE 788 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~Nill~-~~ 788 (969)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~ 168 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK-------------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTT
T ss_pred EEEEEecCCCCHHHHHHHcc-------------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCC
Confidence 99999999999999997643 388999999999999999999988 7 99999999999998 78
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+.+||+|||++..... .......||+.|+|||.+. +.++.++||||+||++|||++|+.||........ ...
T Consensus 169 ~~~kl~Dfg~~~~~~~----~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~ 240 (290)
T 1t4h_A 169 GSVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYR 240 (290)
T ss_dssp SCEEECCTTGGGGCCT----TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHH
T ss_pred CCEEEeeCCCcccccc----cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH---HHH
Confidence 8999999999975422 2233457999999999876 4689999999999999999999999976433211 111
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
........ ...+...+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 241 RVTSGVKP---------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHTTTCCC---------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccCCc---------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11111110 0111112257899999999999999999999985
No 206
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-38 Score=342.74 Aligned_cols=255 Identities=26% Similarity=0.405 Sum_probs=208.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|... ++..||||++..... ..+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 57889999999999999999986 567899999865432 23678999999999999999999999864 5689999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 87 e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSG-----------IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp ECCTTCBHHHHTTSHHH-----------HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred ecCCCCCHHHHHhcCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECC
Confidence 99999999999975431 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... .........+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.+.........+...
T Consensus 153 fg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----- 226 (279)
T 1qpc_A 153 FGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----- 226 (279)
T ss_dssp CTTCEECSSS-CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----
T ss_pred CcccccccCc-ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----
Confidence 9999876432 1222234457889999999998899999999999999999999 88888765543333222111
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.....+...+..+.+++.+||+.||++||++.++++.|++..
T Consensus 227 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 227 ---------YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 011112223467899999999999999999999999998874
No 207
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=354.65 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=202.6
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..+.||+|+||.||+|++..+++.||||++..... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 578999999999999999999998999999999854321 122234568999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCG------------NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp ECCS-EEHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECS
T ss_pred cccc-cCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEcc
Confidence 9997 59999987654 2488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.........+.+......
T Consensus 144 fg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 221 (324)
T 3mtl_A 144 FGLARAKSIP--TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred CcccccccCC--ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999865322 223334578999999999876 5689999999999999999999999988766555544444322211
Q ss_pred C--chhhhc---------cCCCC----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 875 P--ITDALD---------KGIAE----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 875 ~--~~~~~~---------~~~~~----~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. ...... +.... ......+..+.+++.+|++.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 222 EETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1 000000 00000 001122367889999999999999999999986
No 208
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=354.53 Aligned_cols=266 Identities=24% Similarity=0.335 Sum_probs=198.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHH--HhccccCceeeEEEEEEc-----
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI--LGTIRHANIVKLWCCISS----- 707 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~----- 707 (969)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 56899999999999999999987 68999999985432 2334444444 445899999999986532
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC------CCCeEecCCCCC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC------TPQIIHRDVKSS 781 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlkp~ 781 (969)
....++||||+++|+|.+++.... .++..++.++.|++.||+|||+.+ .++|+||||||+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~ 149 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT--------------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSR 149 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC--------------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGG
T ss_pred CceEEEEEecCCCCcHHHHHhhcc--------------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccc
Confidence 235689999999999999997543 588999999999999999999652 238999999999
Q ss_pred cEEECCCCcEEEeecccceecccCCC------CccccccccCcccCchhhccc-------CCCCCccchhhHHHHHHHHH
Q 002085 782 NILLDSEFKAKIADFGLAKMLAKQGE------PHTMSAVAGSFGYFAPEYAYT-------TKVNEKIDIYSFGVVLLELV 848 (969)
Q Consensus 782 Nill~~~~~~kl~Dfgla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ell 848 (969)
||+++.++.+||+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 150 Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell 229 (336)
T 3g2f_A 150 NVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229 (336)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH
Confidence 99999999999999999987643221 122234569999999999887 35667899999999999999
Q ss_pred hCCCCCCCCCccchH--------------HHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCH
Q 002085 849 TGKEANYGDEHTSLA--------------EWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSM 914 (969)
Q Consensus 849 tg~~p~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 914 (969)
+|+.||......... ........... ....... ........+..+.+++.+||+.||++|||+
T Consensus 230 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 306 (336)
T 3g2f_A 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK-QRPKFPE--AWKENSLAVRSLKETIEDCWDQDAEARLTA 306 (336)
T ss_dssp TTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC-CCCCCCT--TCCCCSHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred hcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccc-cCCCCCc--ccccccchHHHHHHHHHHHhcCChhhCcch
Confidence 998887653321110 00000000000 0000000 011233456789999999999999999999
Q ss_pred HHHHHHHhhcC
Q 002085 915 KEVLQILRRCC 925 (969)
Q Consensus 915 ~evl~~L~~~~ 925 (969)
+|+++.|+++.
T Consensus 307 ~e~l~~L~~ll 317 (336)
T 3g2f_A 307 QXAEERMAELM 317 (336)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 209
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-38 Score=358.05 Aligned_cols=264 Identities=22% Similarity=0.316 Sum_probs=208.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|.+..+++.||+|++.... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 357899999999999999999999999999999986542 345567899999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+
T Consensus 110 ~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~ 174 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG-------------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLC 174 (360)
T ss_dssp ECCCTTCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEEC
T ss_pred EECCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEE
Confidence 99999999999998643 3889999999999999999999731 79999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc--
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE-- 872 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-- 872 (969)
|||+++..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..............
T Consensus 175 Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 250 (360)
T 3eqc_A 175 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 250 (360)
T ss_dssp CCCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------
T ss_pred ECCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccC
Confidence 99999765322 223457899999999999999999999999999999999999999765543322211000000
Q ss_pred -----------------------cCCchhh----hccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 -----------------------EKPITDA----LDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 -----------------------~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.....+. .............+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 251 AETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000 0000000111122467899999999999999999999986
No 210
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.5e-38 Score=359.16 Aligned_cols=206 Identities=25% Similarity=0.371 Sum_probs=172.6
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC--
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE-- 708 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-- 708 (969)
...+.++|+..+.||+|+||.||+|.+..+++.||||++.... ......+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 99 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL 99 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC
Confidence 3345678999999999999999999999999999999996542 2445567899999999999999999999998766
Q ss_pred ---CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE
Q 002085 709 ---NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 785 (969)
Q Consensus 709 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill 785 (969)
...|+||||++ ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 100 ~~~~~~~lv~e~~~-~~L~~~~~~~~-------------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl 162 (432)
T 3n9x_A 100 LKFDELYIVLEIAD-SDLKKLFKTPI-------------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLL 162 (432)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHHSSC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred CcCCeEEEEEecCC-cCHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEE
Confidence 57899999996 69999997543 389999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeecccceecccCCCC--------------------ccccccccCcccCchhhc-ccCCCCCccchhhHHHHH
Q 002085 786 DSEFKAKIADFGLAKMLAKQGEP--------------------HTMSAVAGSFGYFAPEYA-YTTKVNEKIDIYSFGVVL 844 (969)
Q Consensus 786 ~~~~~~kl~Dfgla~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il 844 (969)
+.++.+||+|||+|+........ .......||+.|+|||++ .+..++.++||||+||++
T Consensus 163 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il 242 (432)
T 3n9x_A 163 NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF 242 (432)
T ss_dssp CTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred CCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHH
Confidence 99999999999999876543221 123567899999999986 566799999999999999
Q ss_pred HHHHhCCCCC
Q 002085 845 LELVTGKEAN 854 (969)
Q Consensus 845 ~elltg~~p~ 854 (969)
|||++|..||
T Consensus 243 ~ell~g~~p~ 252 (432)
T 3n9x_A 243 AELLNMLQSH 252 (432)
T ss_dssp HHHHTTCTTT
T ss_pred HHHHhccccc
Confidence 9999854443
No 211
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.8e-39 Score=347.55 Aligned_cols=251 Identities=26% Similarity=0.433 Sum_probs=208.0
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc-----
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----- 707 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----- 707 (969)
.+..+|+..+.||+|+||.||+|++..+++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 45568999999999999999999999899999999986542 356789999999999999999998854
Q ss_pred -----------CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEec
Q 002085 708 -----------ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHR 776 (969)
Q Consensus 708 -----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 776 (969)
....++||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~ 146 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-----------EKLDKVLALELFEQITKGVDYIHSK---KLINR 146 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGGG-----------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhccC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---Ceeec
Confidence 4457999999999999999976432 3488999999999999999999998 99999
Q ss_pred CCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 002085 777 DVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 856 (969)
Q Consensus 777 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~ 856 (969)
||||+||+++.++.+||+|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||++|..|+..
T Consensus 147 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 223 (284)
T 2a19_B 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223 (284)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH
T ss_pred cCCHHHEEEcCCCCEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh
Confidence 999999999999999999999998764322 23345689999999999999999999999999999999999988642
Q ss_pred CCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 857 DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
.. ........ ..... ..+..+.+++.+||+.||++||++.|+++.|+....
T Consensus 224 ~~------~~~~~~~~---------~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 224 TS------KFFTDLRD---------GIISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HH------HHHHHHHT---------TCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred HH------HHHHHhhc---------ccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 11 11111111 11111 122567899999999999999999999999998864
No 212
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=9e-38 Score=342.53 Aligned_cols=262 Identities=23% Similarity=0.258 Sum_probs=208.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhc-HHHHHHHHHHHHHHhccccCceeeEEEEEE--cCCc
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLN-QKLEKEFIAEIEILGTIRHANIVKLWCCIS--SENS 710 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 710 (969)
+.++|++.+.||+|+||.||+|.+..+++.||+|++....... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999999899999999996543211 234578999999999999999999999984 4567
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCc
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFK 790 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 790 (969)
.++||||++++ |.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~-----------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~ 147 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPE-----------KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGT 147 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTT-----------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEehhccCC-HHHHHHhCcc-----------cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCc
Confidence 89999999876 7777765432 3588999999999999999999998 9999999999999999999
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhcccCC--CCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK--VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+||+|||++................||+.|+|||++.+.. ++.++||||+|+++|||++|+.||.+.........+..
T Consensus 148 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~ 227 (305)
T 2wtk_C 148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK 227 (305)
T ss_dssp EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc
Confidence 9999999998765433334445567999999999987654 37799999999999999999999987654333222211
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRCC 925 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~~ 925 (969)
... ..+...+..+.+++.+||+.||++||++.|+++ .+++..
T Consensus 228 ----~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 228 ----GSY-----------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271 (305)
T ss_dssp ----CCC-----------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred ----CCC-----------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence 110 011123367889999999999999999999996 455443
No 213
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=354.96 Aligned_cols=261 Identities=23% Similarity=0.338 Sum_probs=203.9
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC---
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--- 709 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 709 (969)
.+.++|+..+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+++++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc
Confidence 45678999999999999999999999999999999985543 23455678999999999999999999999997653
Q ss_pred ---ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 710 ---SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 710 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
..|+||||+ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~~--------------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 162 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKHE--------------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVN 162 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHHC--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred cCceEEEEEecC-CCCHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEc
Confidence 459999999 78999998753 378899999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
.++.+||+|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.......
T Consensus 163 ~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~ 237 (367)
T 1cm8_A 163 EDCELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237 (367)
T ss_dssp TTCCEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCCEEEEeeeccccccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999987532 2344678999999999887 6799999999999999999999999987765444333
Q ss_pred HHHHhhccCCchhhhcc--------------CC----CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 866 AWRHYAEEKPITDALDK--------------GI----AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~--------------~~----~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
+...... +..+.... .. ........+..+.+++.+|+..||++|||+.|+++
T Consensus 238 i~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 238 IMKVTGT--PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHCC--CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhcCC--CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 3222111 00000000 00 00011223467899999999999999999999997
No 214
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.4e-38 Score=347.85 Aligned_cols=256 Identities=20% Similarity=0.237 Sum_probs=202.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEc--CCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISS--ENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~ 711 (969)
.++|+..++||+|+||.||+|.+..+++.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 467999999999999999999999999999999986432 367889999999997 9999999999988 6678
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC-c
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF-K 790 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~-~ 790 (969)
++||||+++++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 109 ~lv~e~~~~~~l~~~~~~----------------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 169 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT----------------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRK 169 (330)
T ss_dssp EEEEECCCCCCHHHHGGG----------------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred EEEEeccCchhHHHHHHh----------------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCE
Confidence 999999999999998852 77889999999999999999998 999999999999999776 8
Q ss_pred EEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCcc-chHHHHHH
Q 002085 791 AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHT-SLAEWAWR 868 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~-~~~~~~~~ 868 (969)
+||+|||+++.+.... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+..
T Consensus 170 ~kl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~ 246 (330)
T 3nsz_A 170 LRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246 (330)
T ss_dssp EEECCCTTCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred EEEEeCCCceEcCCCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHH
Confidence 9999999998764322 2344578999999999877 67899999999999999999999999654322 11111111
Q ss_pred HhhccCCchhhhc-----------------------cCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALD-----------------------KGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.. ......+.++ ...........+..+.+++.+||+.||++|||++|+++
T Consensus 247 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 247 VL-GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HH-CHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hc-CCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000000000 00011111223478899999999999999999999986
No 215
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.9e-38 Score=343.03 Aligned_cols=261 Identities=22% Similarity=0.232 Sum_probs=208.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEE-EcCCceE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCI-SSENSKL 712 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 712 (969)
+.++|+..+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++.++|++++..+.++ .+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 45689999999999999999999988999999999865432 24588999999999988766555554 6677889
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC---CCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD---SEF 789 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~---~~~ 789 (969)
+||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ .++
T Consensus 82 lv~e~~-~~~L~~~~~~~~------------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~ 145 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS------------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGN 145 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTT
T ss_pred EEEEec-CCCHHHHHHhhc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCC
Confidence 999999 899999997543 2489999999999999999999998 999999999999994 788
Q ss_pred cEEEeecccceecccCCCCc-----cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc---c
Q 002085 790 KAKIADFGLAKMLAKQGEPH-----TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT---S 861 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~---~ 861 (969)
.+||+|||+++......... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.... .
T Consensus 146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 3uzp_A 146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence 99999999998765433211 224567999999999999999999999999999999999999999864322 2
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 862 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
....+...... .+. ... ....+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 226 ~~~~~~~~~~~-~~~-~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 226 KYERISEKKMS-TPI-EVL--------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHHHHHHHH-SCH-HHH--------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhhhhcccccC-Cch-HHH--------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 22222111111 000 000 0112367899999999999999999999999998885
No 216
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-38 Score=380.92 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=202.9
Q ss_pred ceeeecCcEEEEEEEE--cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEEeecc
Q 002085 642 NLIGSGGSGQVYRIDI--NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYME 719 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 719 (969)
++||+|+||.||+|.+ ..+++.||||+++... .+....+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 5799999999999965 4557899999996543 233445789999999999999999999999965 56899999999
Q ss_pred CCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeecccc
Q 002085 720 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLA 799 (969)
Q Consensus 720 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla 799 (969)
+|+|.+++.... .+++..++.|+.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 453 ~g~L~~~l~~~~-------------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla 516 (635)
T 4fl3_A 453 LGPLNKYLQQNR-------------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 516 (635)
T ss_dssp TEEHHHHHHHCT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHH
T ss_pred CCCHHHHHhhCC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCc
Confidence 999999997643 388999999999999999999998 9999999999999999999999999999
Q ss_pred eecccCCCC-ccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccCCch
Q 002085 800 KMLAKQGEP-HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPIT 877 (969)
Q Consensus 800 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 877 (969)
+.+...... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.........+..
T Consensus 517 ~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~--------- 587 (635)
T 4fl3_A 517 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK--------- 587 (635)
T ss_dssp HHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT---------
T ss_pred cccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc---------
Confidence 876543222 22334457889999999999999999999999999999998 9999987665443332221
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002085 878 DALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRC 924 (969)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 924 (969)
+.....+...+..+.+++..||+.||++||++++|++.|++.
T Consensus 588 -----~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 588 -----GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp -----TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111122333457899999999999999999999999999875
No 217
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=378.83 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=202.5
Q ss_pred eeeecCcEEEEEEEEc--CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEEeeccC
Q 002085 643 LIGSGGSGQVYRIDIN--GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVYEYMEN 720 (969)
Q Consensus 643 ~lG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 720 (969)
.||+|+||.||+|.+. .++..||||+++... .....+.+.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence 7999999999999875 356679999986542 22335789999999999999999999999976 569999999999
Q ss_pred CCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeecccce
Q 002085 721 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 800 (969)
Q Consensus 721 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 800 (969)
|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 420 g~L~~~l~~~~------------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~ 484 (613)
T 2ozo_A 420 GPLHKFLVGKR------------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSK 484 (613)
T ss_dssp CBHHHHHTTCT------------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred CcHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence 99999997543 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ecccCCCCc-cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccCCchh
Q 002085 801 MLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEKPITD 878 (969)
Q Consensus 801 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (969)
.+....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+..
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~---------- 554 (613)
T 2ozo_A 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ---------- 554 (613)
T ss_dssp TCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT----------
T ss_pred cccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc----------
Confidence 764332211 1223346789999999999999999999999999999998 9999987665444333221
Q ss_pred hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 879 ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+...+.+...+..+.++|.+||+.||++||++.++++.|+...
T Consensus 555 ----~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 555 ----GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp ----TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111223334578999999999999999999999999998874
No 218
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.2e-39 Score=366.12 Aligned_cols=250 Identities=14% Similarity=0.143 Sum_probs=195.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHH---HHhccccCceeeEE-------EE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE---ILGTIRHANIVKLW-------CC 704 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 704 (969)
.++|+..+.||+|+||.||+|++..+|+.||||++...........+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888999999999999999998889999999997554444455678999994 55555899999998 77
Q ss_pred EEcCCc-----------------eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcc
Q 002085 705 ISSENS-----------------KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH 767 (969)
Q Consensus 705 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~ 767 (969)
+.+++. .|+||||+ +|+|.+++....... .....++|..++.|+.|++.||+|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~------~~~~~l~~~~~~~i~~qi~~aL~~LH~ 224 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS------STHKSLVHHARLQLTLQVIRLLASLHH 224 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTT------TTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccc------cccccccHHHHHHHHHHHHHHHHHHHh
Confidence 776543 78999999 689999998653210 011235568899999999999999999
Q ss_pred cCCCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccC-----------CCCCccc
Q 002085 768 DCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-----------KVNEKID 836 (969)
Q Consensus 768 ~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sD 836 (969)
. +|+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|
T Consensus 225 ~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D 295 (377)
T 3byv_A 225 Y---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD 295 (377)
T ss_dssp T---TEECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred C---CeecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence 8 99999999999999999999999999998532 12334567 999999999887 8999999
Q ss_pred hhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 002085 837 IYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE 916 (969)
Q Consensus 837 vwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~e 916 (969)
||||||++|||++|+.||.+........ .... .. ...+..+.+++.+||+.||++||++.|
T Consensus 296 vwSlG~il~elltg~~Pf~~~~~~~~~~-------------~~~~-~~-----~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 296 AWALGLVIYWIWCADLPITKDAALGGSE-------------WIFR-SC-----KNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHHHHHHHSSCCC------CCSG-------------GGGS-SC-----CCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHHHHHHHCCCCCcccccccchh-------------hhhh-hc-----cCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 9999999999999999997644322111 1111 00 112367889999999999999999999
Q ss_pred HHH
Q 002085 917 VLQ 919 (969)
Q Consensus 917 vl~ 919 (969)
+++
T Consensus 357 ~l~ 359 (377)
T 3byv_A 357 AME 359 (377)
T ss_dssp HHT
T ss_pred Hhh
Confidence 985
No 219
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.7e-39 Score=376.37 Aligned_cols=256 Identities=28% Similarity=0.455 Sum_probs=209.9
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|+..++||+|+||.||+|.+.. +..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..|+||
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 467888999999999999999974 56799999965432 13578999999999999999999999876 6789999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEee
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIAD 795 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 795 (969)
||+++|+|.++++.... ..+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 341 e~~~~gsL~~~l~~~~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 406 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETG-----------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 406 (535)
T ss_dssp CCCTTEEHHHHHSHHHH-----------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred ehhcCCcHHHHHhhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcc
Confidence 99999999999975421 3488999999999999999999998 999999999999999999999999
Q ss_pred cccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhccC
Q 002085 796 FGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAEEK 874 (969)
Q Consensus 796 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 874 (969)
||+++.+... .........++..|+|||.+.+..++.++|||||||++|||++ |+.||.+....+....+..
T Consensus 407 FG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~------ 479 (535)
T 2h8h_A 407 FGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER------ 479 (535)
T ss_dssp TTSTTTCCCH-HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT------
T ss_pred cccceecCCC-ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------
Confidence 9999865321 1111223456789999999999999999999999999999999 8888876654433332211
Q ss_pred CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 875 PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
+...+.+...+..+.++|.+||+.||++||++.+|+++|+.+..
T Consensus 480 --------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 480 --------GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp --------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred --------CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 11112233345788999999999999999999999999999864
No 220
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4e-38 Score=366.39 Aligned_cols=342 Identities=27% Similarity=0.355 Sum_probs=175.6
Q ss_pred CeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecC
Q 002085 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153 (969)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 153 (969)
+++.|++.++++.. +| .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++..| ++++++|++|+|+
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 45555555555543 22 25555555666665555553322 5555555555555555553332 5555555555555
Q ss_pred CCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccc
Q 002085 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIG 233 (969)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 233 (969)
+|++++. |. +.++++|++|++++|++++ ++ .++.+++|++|++++ ++.+
T Consensus 121 ~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~---------------------------~~~~ 169 (466)
T 1o6v_A 121 NNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFGN---------------------------QVTD 169 (466)
T ss_dssp SSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEEE---------------------------SCCC
T ss_pred CCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecCC---------------------------cccC
Confidence 5555532 21 5555555555555555553 22 244445555544432 2222
Q ss_pred cCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccC
Q 002085 234 EIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGK 312 (969)
Q Consensus 234 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~ 312 (969)
.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+++..| +... +|+.|++++|++++. ..+.
T Consensus 170 ~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~- 240 (466)
T 1o6v_A 170 LK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA- 240 (466)
T ss_dssp CG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGG-
T ss_pred ch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhh-
Confidence 22 277778888888888888743 346667777777777776664433 2111 344444444444421 1233
Q ss_pred cccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccc
Q 002085 313 LKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 392 (969)
Q Consensus 313 l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 392 (969)
.+++|+.|++++|++++..| +..+++|+.|++++|.++
T Consensus 241 ----------------------------------------~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 278 (466)
T 1o6v_A 241 ----------------------------------------SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 278 (466)
T ss_dssp ----------------------------------------GCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCC
T ss_pred ----------------------------------------cCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccC
Confidence 34445555555555443222 334444444444444444
Q ss_pred cccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccc
Q 002085 393 GELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSW 472 (969)
Q Consensus 393 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 472 (969)
+..+....++|+.|+|++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+
T Consensus 279 ~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l 352 (466)
T 1o6v_A 279 NISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANL 352 (466)
T ss_dssp CCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred ccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccC
Confidence 33222222344445555555544333 4445555555555555554433 44555555555555555543 345555
Q ss_pred cCCCEEEccCccccCCCCcccccccccceEeccCccccc
Q 002085 473 TSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 511 (969)
Q Consensus 473 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 511 (969)
++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 353 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 353 TNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 556666666666555444 5555556666666665553
No 221
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-38 Score=358.84 Aligned_cols=257 Identities=9% Similarity=0.000 Sum_probs=189.9
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc--ccCceeeEE-------EEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI--RHANIVKLW-------CCIS 706 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 706 (969)
.+|+..+.||+|+||.||+|++..+++.||||++...........+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4588999999999999999999989999999999876554556667888886555555 699988765 5554
Q ss_pred cCC-----------------ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHH------HHHHHHHHHhhh
Q 002085 707 SEN-----------------SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTR------LQIAIGAAQGLC 763 (969)
Q Consensus 707 ~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~------~~i~~~ia~~L~ 763 (969)
.++ ..|+||||++ |+|.+++..... .+.+..+ ..++.|++.||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~------------~~~~~~~~~~~vk~~i~~qi~~aL~ 208 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF------------VYVFRGDEGILALHILTAQLIRLAA 208 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH------------SCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc------------ccchhhhhhhhhHHHHHHHHHHHHH
Confidence 332 3799999998 899999987532 2455666 788899999999
Q ss_pred hhcccCCCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhccc--CCCCCccchhhHH
Q 002085 764 YMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFG 841 (969)
Q Consensus 764 ~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG 841 (969)
|||+. +|+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++||||||
T Consensus 209 ~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 209 NLQSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp HHHHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred HHHHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 99998 999999999999999999999999999986532 1113456799999999987 6799999999999
Q ss_pred HHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 842 VVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 842 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
|++|||++|+.||.+........ +. ..............+.....+..+.+++.+||+.||++||++.|+++
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKGS-----WK-RPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTTC-----CC-BCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHhCCCCCCCcCcccccc-----hh-hhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99999999999997653321110 00 00000001111111222234578899999999999999999999974
No 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.5e-38 Score=344.52 Aligned_cols=252 Identities=24% Similarity=0.321 Sum_probs=210.0
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..+.|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 34578999999999999999999998999999999865432 2235779999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 98 v~e~~~~~~L~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 160 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEPG--------------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKL 160 (303)
T ss_dssp EEECCTTEEHHHHHTTS--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEeCCCCcHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEE
Confidence 99999999999998642 388999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||++..+... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+.. .
T Consensus 161 ~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~ 234 (303)
T 3a7i_A 161 ADFGVAGQLTDT--QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----N 234 (303)
T ss_dssp CCCTTCEECBTT--BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----S
T ss_pred eecccceecCcc--ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc----C
Confidence 999999876432 2223446789999999999999999999999999999999999999976544332222111 1
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQI 920 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 920 (969)
.. ... ....+..+.+++.+||+.||++||++.|+++.
T Consensus 235 ~~------~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 235 NP------PTL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CC------CCC----CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CC------CCC----ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 011 11223678999999999999999999999874
No 223
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.9e-39 Score=347.61 Aligned_cols=264 Identities=25% Similarity=0.347 Sum_probs=202.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcC-CC--cEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDING-AG--EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|++.. ++ ..||||+++..........+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 3578999999999999999998643 33 369999986654444456688999999999999999999999998764 8
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~ 160 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ------------GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV 160 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG------------GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEE
T ss_pred eeeEecccCCCHHHHHHhcc------------CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCE
Confidence 89999999999999998643 2488999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCc-cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHH
Q 002085 792 KIADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 869 (969)
||+|||+++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.+.........+.
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-- 238 (291)
T 1u46_A 161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID-- 238 (291)
T ss_dssp EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH--
T ss_pred EEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHH--
Confidence 999999998765433222 2234467889999999998889999999999999999999 999987665433322221
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCPT 927 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 927 (969)
... ...+.+...+..+.+++.+||+.||++||++.++++.|+++.+.
T Consensus 239 -~~~----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 239 -KEG----------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -TSC----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -ccC----------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 111 11111223346789999999999999999999999999998753
No 224
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-38 Score=343.21 Aligned_cols=251 Identities=27% Similarity=0.384 Sum_probs=201.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC-CceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE-NSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~l 713 (969)
.++|+..+.||+|+||.||+|++ +|+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 46799999999999999999988 48899999986432 346789999999999999999999997554 57899
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 93 v~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l 158 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGR-----------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKV 158 (278)
T ss_dssp EECCCTTEEHHHHHHHHHH-----------HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred EEecCCCCCHHHHHHhccc-----------ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEE
Confidence 9999999999999976432 2378899999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHhhc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
+|||+++..... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...........+. .
T Consensus 159 ~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~----~ 229 (278)
T 1byg_A 159 SDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE----K 229 (278)
T ss_dssp CCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT----T
T ss_pred eecccccccccc-----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh----c
Confidence 999998754321 123457889999999999999999999999999999998 888887655444332221 1
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
+.....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 230 ----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 230 ----------GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp ----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 1111122233467899999999999999999999999998875
No 225
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6e-38 Score=362.33 Aligned_cols=262 Identities=20% Similarity=0.221 Sum_probs=211.3
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcccc-CceeeEEEEEEcCCceE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH-ANIVKLWCCISSENSKL 712 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~ 712 (969)
+.++|++.++||+|+||.||+|++..+++.||||++..... ...+.+|+++++.++| +++..+..++.+.+..+
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 44689999999999999999999998999999998865432 2357889999999976 66667777777888899
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE---CCCC
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---DSEF 789 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---~~~~ 789 (969)
+||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 80 lvme~~-g~sL~~ll~~~~------------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~ 143 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCS------------RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRAN 143 (483)
T ss_dssp EEEECC-CCBHHHHHHHTT------------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTT
T ss_pred EEEECC-CCCHHHHHHhhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCC
Confidence 999999 999999998543 2489999999999999999999998 99999999999999 5789
Q ss_pred cEEEeecccceecccCCCCc-----cccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 790 KAKIADFGLAKMLAKQGEPH-----TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+........
T Consensus 144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~ 223 (483)
T 3sv0_A 144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ 223 (483)
T ss_dssp CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH
T ss_pred eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH
Confidence 99999999999875533221 2235679999999999999999999999999999999999999998765443333
Q ss_pred HHHHHhhc--cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 865 WAWRHYAE--EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 865 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
........ ...... +. ...+.++.+++..||+.||++||++.+|++.|+++.
T Consensus 224 ~~~~i~~~~~~~~~~~-l~--------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 224 KYEKISEKKVATSIEA-LC--------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHHHHHHHHHSCHHH-HH--------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhhccccccHHH-Hh--------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 22211111 011111 11 112367899999999999999999999999998885
No 226
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.6e-38 Score=361.75 Aligned_cols=257 Identities=26% Similarity=0.310 Sum_probs=197.4
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh-----cHHHHHHHHHHHHHHhccccCceeeEEEEEE
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-----NQKLEKEFIAEIEILGTIRHANIVKLWCCIS 706 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 706 (969)
..+.++|...+.||+|+||.||+|.+..+++.||||++...... .......+.+|++++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45677899999999999999999999999999999999654322 1122345889999999999999999999986
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
. +..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~ 273 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVGNK-------------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLS 273 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSSSC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEES
T ss_pred c-CceEEEEEcCCCCcHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEe
Confidence 4 45899999999999999887543 389999999999999999999998 999999999999997
Q ss_pred CCC---cEEEeecccceecccCCCCccccccccCcccCchhhccc---CCCCCccchhhHHHHHHHHHhCCCCCCCCCcc
Q 002085 787 SEF---KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT---TKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 860 (969)
Q Consensus 787 ~~~---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~elltg~~p~~~~~~~ 860 (969)
.++ .+||+|||+++.... ........||+.|+|||++.+ ..++.++||||+||++|||++|..||......
T Consensus 274 ~~~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 350 (419)
T 3i6u_A 274 SQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350 (419)
T ss_dssp SSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS
T ss_pred cCCCcceEEEeecccceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch
Confidence 554 599999999987632 223345679999999999863 56788999999999999999999999765433
Q ss_pred -chHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 861 -SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 861 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+...+... ..... .......+..+.+++.+||+.||++||+++|+++
T Consensus 351 ~~~~~~i~~~---~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 351 VSLKDQITSG---KYNFI--------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCHHHHHHTT---CCCCC--------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhcC---CCCCC--------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 222221110 00000 0001122467899999999999999999999987
No 227
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=356.05 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=205.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEc---CCCcEEEEEEEeccchh-cHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCC
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDIN---GAGEFVAVKRIWNNRKL-NQKLEKEFIAEIEILGTI-RHANIVKLWCCISSEN 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 709 (969)
.++|+..++||+|+||.||+|+.. .+++.||||+++..... .....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 468999999999999999999984 47899999998653221 112235677899999999 6999999999999999
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 196 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-------------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNG 196 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTS
T ss_pred eEEEEeecCCCCCHHHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 9999999999999999998643 388999999999999999999988 999999999999999999
Q ss_pred cEEEeecccceecccCCCCccccccccCcccCchhhcccC--CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT--KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
.+||+|||+++.+... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.
T Consensus 197 ~~kl~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~ 275 (355)
T 1vzo_A 197 HVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275 (355)
T ss_dssp CEEESCSSEEEECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred cEEEeeCCCCeecccC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH
Confidence 9999999999876432 12223345799999999999863 47889999999999999999999997654433322222
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRP-----SMKEVLQI 920 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~ 920 (969)
....... .+.+...+..+.+++.+||..||++|| ++.|+++.
T Consensus 276 ~~~~~~~-----------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 276 RRILKSE-----------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHhccC-----------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 2221111 011223346788999999999999999 88888763
No 228
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=351.68 Aligned_cols=254 Identities=16% Similarity=0.166 Sum_probs=205.9
Q ss_pred cCCCccceeeecCcEEEEEEE-----EcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc---cCceeeEEEEEEc
Q 002085 636 SSLTESNLIGSGGSGQVYRID-----INGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR---HANIVKLWCCISS 707 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 707 (969)
++|++.++||+|+||.||+|. ...+++.||||++.... ...+.+|+++++.++ |+||+++++++..
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 578899999999999999994 56678899999986542 246777888888775 9999999999999
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
++..|+||||+++|+|.+++...... ....++|..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~--------~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~ 207 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNT--------PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGN 207 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTS--------TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECG
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcc--------cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecc
Confidence 99999999999999999999854321 123599999999999999999999988 9999999999999998
Q ss_pred -----------CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCC
Q 002085 788 -----------EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYG 856 (969)
Q Consensus 788 -----------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~ 856 (969)
++.+||+|||+|+.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 208 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp GGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999876544444555667899999999999999999999999999999999999999864
Q ss_pred CCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhhcC
Q 002085 857 DEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSR-PSMKEVLQILRRCC 925 (969)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R-Ps~~evl~~L~~~~ 925 (969)
...... . ........ + ....+.+++..|++.+|.+| |+++++.+.|++..
T Consensus 288 ~~~~~~------------~----~~~~~~~~-~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 288 NEGGEC------------K----PEGLFRRL-P--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp EETTEE------------E----ECSCCTTC-S--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred CCCCce------------e----echhcccc-C--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 322110 0 00111111 1 13567789999999999998 68888888887775
No 229
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7.5e-38 Score=358.83 Aligned_cols=264 Identities=22% Similarity=0.265 Sum_probs=208.5
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc------ccCceeeEEEEE
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI------RHANIVKLWCCI 705 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~ 705 (969)
..+..+|++.++||+|+||.||+|.+..+++.||||++... ....+.+.+|+++++.+ +|+||+++++++
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~ 168 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF 168 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence 44567899999999999999999999999999999999643 23346677888888877 477999999999
Q ss_pred EcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE
Q 002085 706 SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 785 (969)
Q Consensus 706 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill 785 (969)
......++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 169 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl 233 (429)
T 3kvw_A 169 TFRNHICMTFELLS-MNLYELIKKNKF-----------QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILL 233 (429)
T ss_dssp EETTEEEEEECCCC-CBHHHHHHHTTT-----------CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEE
T ss_pred ccCCeEEEEEeccC-CCHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEE
Confidence 99999999999996 799999986542 3489999999999999999999998 99999999999999
Q ss_pred CCCCc--EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 786 DSEFK--AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 786 ~~~~~--~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
+.++. +||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+..
T Consensus 234 ~~~~~~~vkL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l 308 (429)
T 3kvw_A 234 KQQGRSGIKVIDFGSSCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL 308 (429)
T ss_dssp SSTTSCCEEECCCTTCEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ccCCCcceEEeecccceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99987 99999999976432 223457899999999999999999999999999999999999999877655444
Q ss_pred HHHHHHhhccC--------CchhhhccC------------------------------CCCccc-H-----HHHHHHHHH
Q 002085 864 EWAWRHYAEEK--------PITDALDKG------------------------------IAEPCY-L-----EEMTTVYRL 899 (969)
Q Consensus 864 ~~~~~~~~~~~--------~~~~~~~~~------------------------------~~~~~~-~-----~~~~~~~~l 899 (969)
..+........ ......+.. ...... . .....+.++
T Consensus 309 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl 388 (429)
T 3kvw_A 309 ACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF 388 (429)
T ss_dssp HHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHH
T ss_pred HHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHH
Confidence 33332211100 000000000 000000 0 113668899
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002085 900 ALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 900 ~~~cl~~dP~~RPs~~evl~ 919 (969)
+.+||+.||++|||++|+++
T Consensus 389 i~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 389 LKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHCCCChhhCCCHHHHhC
Confidence 99999999999999999985
No 230
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=354.78 Aligned_cols=262 Identities=15% Similarity=0.173 Sum_probs=206.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcC--------CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceee-------
Q 002085 636 SSLTESNLIGSGGSGQVYRIDING--------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVK------- 700 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------- 700 (969)
++|+..+.||+|+||.||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 689999999999999999999986 4789999998543 46789999999999999887
Q ss_pred --------EEEEEEc-CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCC
Q 002085 701 --------LWCCISS-ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTP 771 (969)
Q Consensus 701 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 771 (969)
+++++.. ++..++||||+ +++|.+++..... ..+++..++.++.|++.||+|||+.
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------~~l~~~~~~~i~~qi~~~L~~LH~~--- 178 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK-----------HVLSERSVLQVACRLLDALEFLHEN--- 178 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG-----------GCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc-----------CCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 6777765 67889999999 9999999986521 3589999999999999999999998
Q ss_pred CeEecCCCCCcEEECCCC--cEEEeecccceecccCCCC-----ccccccccCcccCchhhcccCCCCCccchhhHHHHH
Q 002085 772 QIIHRDVKSSNILLDSEF--KAKIADFGLAKMLAKQGEP-----HTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVL 844 (969)
Q Consensus 772 ~ivH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il 844 (969)
+|+||||||+||+++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++
T Consensus 179 ~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 258 (352)
T 2jii_A 179 EYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCM 258 (352)
T ss_dssp TCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 999999999999999998 8999999999876543221 122345799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCc-cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002085 845 LELVTGKEANYGDEH-TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRR 923 (969)
Q Consensus 845 ~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~ 923 (969)
|||++|+.||..... ..........+.... ........ .....+..+.+++.+||+.||++||++.|+++.|++
T Consensus 259 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 259 LKWLYGFLPWTNCLPNTEDIMKQKQKFVDKP--GPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp HHHHHSCCTTGGGTTCHHHHHHHHHHHHHSC--CCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred HHHHhCCCCcccCCcCHHHHHHHHHhccCCh--hhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 999999999976532 111111111111111 01111000 001123678999999999999999999999999998
Q ss_pred cC
Q 002085 924 CC 925 (969)
Q Consensus 924 ~~ 925 (969)
+.
T Consensus 334 ~~ 335 (352)
T 2jii_A 334 LL 335 (352)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 231
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-37 Score=351.23 Aligned_cols=264 Identities=24% Similarity=0.269 Sum_probs=199.7
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC---
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN--- 709 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 709 (969)
.+.++|+..+.||+|+||.||+|.+..+++.||||++.... ......+.+.+|+++++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 100 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 100 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence 35678999999999999999999999999999999986543 23455678899999999999999999999997655
Q ss_pred ---ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 710 ---SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 710 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
..|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 101 ~~~~~~lv~e~~~-~~l~~~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~ 161 (371)
T 2xrw_A 101 EFQDVYIVMELMD-ANLCQVIQM---------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 161 (371)
T ss_dssp TCCEEEEEEECCS-EEHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred cccceEEEEEcCC-CCHHHHHhh---------------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEc
Confidence 6799999997 578888752 278899999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
.++.+||+|||+++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.......+
T Consensus 162 ~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 238 (371)
T 2xrw_A 162 SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 238 (371)
T ss_dssp TTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCCCEEEEEeeccccccc---ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999986532 22234467899999999999999999999999999999999999999876543332222
Q ss_pred HHHhhcc-------------------CC-----chhhhccC---CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEE-------------------KP-----ITDALDKG---IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~-------------------~~-----~~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....... .. ........ .........+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 1110000 00 00000000 000111233578999999999999999999999996
No 232
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1e-37 Score=362.23 Aligned_cols=200 Identities=25% Similarity=0.346 Sum_probs=158.9
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc-----
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----- 707 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----- 707 (969)
.+.++|++.++||+|+||.||+|.+..+++.||||++.... .+....+.+.+|+++++.++||||+++++++..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence 34578999999999999999999999999999999986532 234456789999999999999999999999843
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
....|+||||+ +++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~~-------------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~ 191 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRTPV-------------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQ 191 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHSSC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECT
T ss_pred CceEEEEEecc-ccchhhhcccCC-------------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECC
Confidence 35789999998 479999997543 389999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCCC-------------------------ccccccccCcccCchhhc-ccCCCCCccchhhHH
Q 002085 788 EFKAKIADFGLAKMLAKQGEP-------------------------HTMSAVAGSFGYFAPEYA-YTTKVNEKIDIYSFG 841 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG 841 (969)
++.+||+|||+|+........ .......||+.|+|||++ .+..++.++||||+|
T Consensus 192 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG 271 (458)
T 3rp9_A 192 DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG 271 (458)
T ss_dssp TCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred CCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHH
Confidence 999999999999876432111 123456789999999976 566799999999999
Q ss_pred HHHHHHHhC
Q 002085 842 VVLLELVTG 850 (969)
Q Consensus 842 ~il~elltg 850 (969)
|++|||++|
T Consensus 272 ~il~elltg 280 (458)
T 3rp9_A 272 CIFAELLNM 280 (458)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999993
No 233
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.5e-38 Score=340.09 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=202.2
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKL 712 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 712 (969)
+.++|+..+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+..+..+ +||||+++++++.+++..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 45689999999999999999999998999999999875433 233457788999999999 9999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC----
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE---- 788 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~---- 788 (969)
+||||+++++|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRI---------MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHH---------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------
T ss_pred EEEEecCCCcHHHHHHhhccc---------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCc
Confidence 999999999999999864321 13488999999999999999999998 99999999999999844
Q ss_pred ---------------CcEEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCC
Q 002085 789 ---------------FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKE 852 (969)
Q Consensus 789 ---------------~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~ 852 (969)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++|||||||++|||++|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 47999999999876432 224589999999999876 56689999999999999999988
Q ss_pred CCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 853 ANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 853 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
++...+. . ....... ....+...+..+.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~~---~----~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 230 LPRNGDQ---W----HEIRQGR----------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CCSSSHH---H----HHHHTTC----------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCcchhH---H----HHHHcCC----------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 7654321 1 1111110 01111223367899999999999999999999986
No 234
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=346.52 Aligned_cols=268 Identities=28% Similarity=0.380 Sum_probs=210.7
Q ss_pred ccCCCccceeeecCcEEEEEEEE----cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCC-
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDI----NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSEN- 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 709 (969)
.++|+..+.||+|+||.||+|+. ..+++.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 35688899999999999999984 557899999998653 3344578999999999999999999999987644
Q ss_pred -ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 710 -SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 710 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 181 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK------------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENE 181 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST------------TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEET
T ss_pred CceEEEEECCCCCCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCC
Confidence 7899999999999999998653 2488999999999999999999998 99999999999999999
Q ss_pred CcEEEeecccceecccCCCCcc-ccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHT-MSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
+.+||+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++|..|+...... ..
T Consensus 182 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~-----~~ 256 (326)
T 2w1i_A 182 NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-----FM 256 (326)
T ss_dssp TEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH-----HH
T ss_pred CcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH-----HH
Confidence 9999999999987654322211 23345778899999999988999999999999999999999887532100 00
Q ss_pred HHhhccC-------CchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 868 RHYAEEK-------PITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 868 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
....... .+.+.+......+.+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 257 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0000000 011112222222223344578999999999999999999999999998874
No 235
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=341.55 Aligned_cols=252 Identities=25% Similarity=0.310 Sum_probs=203.0
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
..+.|+..+.||+|+||.||+|.+..+|+.||||++..... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 45679999999999999999999998999999999865432 3568899999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 102 v~e~~~~~~L~~~~~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 166 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN------------KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKL 166 (314)
T ss_dssp EEECCTTEEHHHHHHHHT------------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEE
T ss_pred EeecCCCCCHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEE
Confidence 999999999999997432 2488999999999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+|||++..+... ........||+.|+|||.+.+..++.++||||+|+++|||++|..||...........+ ....
T Consensus 167 ~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~ 241 (314)
T 3com_A 167 ADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI---PTNP 241 (314)
T ss_dssp CCCTTCEECBTT--BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSC
T ss_pred eecccchhhhhh--ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCC
Confidence 999999876432 22233457899999999999999999999999999999999999999765432221111 1110
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. ... ..+...+..+.+++.+||+.||++||++.|+++
T Consensus 242 ~-------~~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 P-------PTF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp C-------CCC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C-------ccc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 000 111223467899999999999999999999986
No 236
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=338.01 Aligned_cols=254 Identities=24% Similarity=0.304 Sum_probs=202.1
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 715 (969)
++|....+||+|+||.||+|.+..+++.||||.+.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 45666679999999999999999899999999986542 334577999999999999999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC-CCcEEEe
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS-EFKAKIA 794 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~ 794 (969)
||+++++|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 99 e~~~~~~L~~~l~~~~~----------~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~ 165 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWG----------PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKIS 165 (295)
T ss_dssp ECCSEEEHHHHHHHTTC----------CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEEC
T ss_pred EeCCCCCHHHHHHhhcc----------CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEe
Confidence 99999999999986532 12467888999999999999999998 9999999999999987 8999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCC--CCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK--VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAE 872 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 872 (969)
|||+++..... ........||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..................
T Consensus 166 Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (295)
T 2clq_A 166 DFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV 243 (295)
T ss_dssp CTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCC
T ss_pred ecccccccCCC--CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccc
Confidence 99999876432 12233457899999999987654 789999999999999999999999754332211111111100
Q ss_pred cCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 873 EKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....+...+..+.+++.+||+.||++||++.|+++
T Consensus 244 ------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 ------------HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ------------CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ------------cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11112223467889999999999999999999975
No 237
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-37 Score=340.85 Aligned_cols=267 Identities=27% Similarity=0.387 Sum_probs=207.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
+++|+..+.||+|+||.||+|++..+|+.||||++..... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 3578899999999999999999998999999999854321 222246788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~e~~~-~~L~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASAL-----------TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EECCS-EEHHHHHHHTTT-----------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEccc-CCHHHHHHhhhc-----------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEEC
Confidence 99997 699999986542 3478899999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCC-CCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
|||+++..... ........||+.|+|||.+.+.. ++.++||||+||++|||++|+.||.+.+..+....+.+.....
T Consensus 146 dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 223 (299)
T 2r3i_A 146 DFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223 (299)
T ss_dssp STTHHHHHCCC--SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred cchhhhhccCC--ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCC
Confidence 99999865322 22233456899999999998765 7899999999999999999999998766544433333322111
Q ss_pred CCc--hhh-----hccCCCC---c----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 874 KPI--TDA-----LDKGIAE---P----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 874 ~~~--~~~-----~~~~~~~---~----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
... ... ....... . .....+..+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 100 000 0000000 0 01112367889999999999999999999986
No 238
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=7.2e-38 Score=346.00 Aligned_cols=257 Identities=27% Similarity=0.318 Sum_probs=201.8
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh-----cHHHHHHHHHHHHHHhccccCceeeEEEEEE
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-----NQKLEKEFIAEIEILGTIRHANIVKLWCCIS 706 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 706 (969)
..+.++|+..+.||+|+||.||+|.+..+++.||||++...... .......+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 34557899999999999999999999999999999998654321 1222356889999999999999999999987
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
.+. .|+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~ 148 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVGNK-------------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLS 148 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHSTTC-------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred CCc-eEEEEecCCCCcHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEe
Confidence 654 899999999999999987543 388999999999999999999998 999999999999998
Q ss_pred CCCc---EEEeecccceecccCCCCccccccccCcccCchhhcc---cCCCCCccchhhHHHHHHHHHhCCCCCCCCCcc
Q 002085 787 SEFK---AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHT 860 (969)
Q Consensus 787 ~~~~---~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~ 860 (969)
.++. +||+|||+++.... ........||+.|+|||++. ...++.++|||||||++|||++|..||......
T Consensus 149 ~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (322)
T 2ycf_A 149 SQEEDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225 (322)
T ss_dssp SSSSSCCEEECCCTTCEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred cCCCCCeEEEccCccceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence 7664 99999999987632 22233456899999999874 567889999999999999999999999765433
Q ss_pred -chHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 861 -SLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 861 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+...+.... ..... ......+..+.+++.+||+.||++||++.|+++
T Consensus 226 ~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 226 VSLKDQITSGK---YNFIP--------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SCHHHHHHHTC---CCCCH--------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHhCc---cccCc--------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 2222221110 00000 001122467899999999999999999999985
No 239
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.6e-37 Score=357.45 Aligned_cols=323 Identities=28% Similarity=0.381 Sum_probs=212.5
Q ss_pred CCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEe
Q 002085 72 FNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCID 151 (969)
Q Consensus 72 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 151 (969)
..+++.|+++++.+.+..+ +.++++|++|+|++|.+++..+ +.++++|++|+|++|.+++..+ +..+++|++|+
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 140 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEE
Confidence 4579999999999987654 9999999999999999996655 9999999999999999996533 99999999999
Q ss_pred cCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcc
Q 002085 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL 231 (969)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l 231 (969)
|++|.+++ +| .++.+++|++|+++ |.+.+.. .++++++|++|++++|.+.. + ..+..+++|++|++++|.+
T Consensus 141 l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~---~-~~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 141 LSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD---I-SVLAKLTNLESLIATNNQI 211 (466)
T ss_dssp EEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC---C-GGGGGCTTCSEEECCSSCC
T ss_pred CCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC---C-hhhccCCCCCEEEecCCcc
Confidence 99999985 44 58999999999996 5666443 38999999999999996432 2 2366667777777777666
Q ss_pred cccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCcccc
Q 002085 232 IGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFG 311 (969)
Q Consensus 232 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 311 (969)
.+..| ++.+++|++|++++|++++. ..+..+++|+.|++++|.+ ++..+ +.
T Consensus 212 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l-----------------------~~~~~--~~ 262 (466)
T 1o6v_A 212 SDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI-----------------------SNLAP--LS 262 (466)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC-----------------------CCCGG--GT
T ss_pred ccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCcc-----------------------ccchh--hh
Confidence 65544 55566666666666666642 2344455555555555544 43322 55
Q ss_pred CcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCcc
Q 002085 312 KLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTI 391 (969)
Q Consensus 312 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (969)
.+++|+.|++++|.+++. |. +..+++|+.|++++|++++..| +..+++|+.|+|++|++
T Consensus 263 ~l~~L~~L~l~~n~l~~~------------------~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l 321 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNI------------------SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 321 (466)
T ss_dssp TCTTCSEEECCSSCCCCC------------------GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCC
T ss_pred cCCCCCEEECCCCccCcc------------------cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcC
Confidence 566666666666666531 11 4456666666666666664322 44555555555555555
Q ss_pred ccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCccccc
Q 002085 392 SGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVS 471 (969)
Q Consensus 392 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 471 (969)
++..|....++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..
T Consensus 322 ~~~~~~~~l~~L~~L~l~~n~l~~~--------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 373 (466)
T 1o6v_A 322 SDISPVSSLTKLQRLFFYNNKVSDV--------------------------SSLANLTNINWLSAGHNQISDLTP--LAN 373 (466)
T ss_dssp SCCGGGGGCTTCCEEECCSSCCCCC--------------------------GGGTTCTTCCEEECCSSCCCBCGG--GTT
T ss_pred CCchhhccCccCCEeECCCCccCCc--------------------------hhhccCCCCCEEeCCCCccCccch--hhc
Confidence 4443333333444444444444432 234445555555555555554443 455
Q ss_pred ccCCCEEEccCccccC
Q 002085 472 WTSLNNLNLARNELSG 487 (969)
Q Consensus 472 l~~L~~L~Ls~N~l~~ 487 (969)
+++|+.|++++|++++
T Consensus 374 l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 374 LTRITQLGLNDQAWTN 389 (466)
T ss_dssp CTTCCEEECCCEEEEC
T ss_pred CCCCCEEeccCCcccC
Confidence 5555555555555553
No 240
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.7e-37 Score=345.94 Aligned_cols=266 Identities=23% Similarity=0.232 Sum_probs=208.7
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cC-----ceeeEEEEE
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HA-----NIVKLWCCI 705 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~ 705 (969)
+.+.++|+..+.||+|+||+||+|.+..+++.||||+++.. ......+..|+++++.++ |+ +++++++++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 34568999999999999999999999999999999999643 233566788888888875 44 599999999
Q ss_pred EcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE
Q 002085 706 SSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL 785 (969)
Q Consensus 706 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill 785 (969)
...+..++||||++ ++|.+++..... ..+++..+..++.|++.||+|||.+ ..+|+||||||+||++
T Consensus 126 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 126 MFRNHLCLVFEMLS-YNLYDLLRNTNF-----------RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILL 192 (382)
T ss_dssp EETTEEEEEEECCC-CBHHHHHHHTTT-----------SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEE
T ss_pred ccCCceEEEEecCC-CCHHHHHhhcCc-----------CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEE
Confidence 99999999999996 599999986542 3488999999999999999999953 3389999999999999
Q ss_pred C--CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH
Q 002085 786 D--SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA 863 (969)
Q Consensus 786 ~--~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 863 (969)
+ .++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.....
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 267 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM 267 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTC-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ecCCCCcEEEEeccCceeccc-----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 5 467899999999987632 223467899999999999999999999999999999999999999877655444
Q ss_pred HHHHHHhhccC--------CchhhhccC-----------------------------------------CCCcccHHHHH
Q 002085 864 EWAWRHYAEEK--------PITDALDKG-----------------------------------------IAEPCYLEEMT 894 (969)
Q Consensus 864 ~~~~~~~~~~~--------~~~~~~~~~-----------------------------------------~~~~~~~~~~~ 894 (969)
..+........ ...+....- -.......+..
T Consensus 268 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (382)
T 2vx3_A 268 NKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYL 347 (382)
T ss_dssp HHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHH
T ss_pred HHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhH
Confidence 44433221100 000000000 00011223446
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 895 TVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 895 ~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+.+++.+||+.||++|||++|+++
T Consensus 348 ~~~dli~~mL~~dP~~Rpta~e~L~ 372 (382)
T 2vx3_A 348 KFKDLILRMLDYDPKTRIQPYYALQ 372 (382)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHhcCCChhhCCCHHHHhc
Confidence 7899999999999999999999875
No 241
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1e-37 Score=349.16 Aligned_cols=270 Identities=21% Similarity=0.318 Sum_probs=208.5
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc-----
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS----- 707 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----- 707 (969)
+..++|+..+.||+|+||.||+|++..+|+.||||++..... .......+.+|+++++.++||||+++++++.+
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (351)
T 3mi9_A 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 92 (351)
T ss_dssp CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence 446789999999999999999999999999999998855432 22223567899999999999999999999876
Q ss_pred ---CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 708 ---ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 708 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
.+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~lv~e~~~~-~l~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl 156 (351)
T 3mi9_A 93 NRCKGSIYLVFDFCEH-DLAGLLSNVL------------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVL 156 (351)
T ss_dssp ----CEEEEEEECCSE-EHHHHHHCTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred ccCCceEEEEEeccCC-CHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEE
Confidence 3468999999984 7777776543 2489999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCC--CccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccc
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGE--PHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 861 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~ 861 (969)
++.++.+||+|||+++.+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.....
T Consensus 157 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 236 (351)
T 3mi9_A 157 ITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 236 (351)
T ss_dssp ECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred EcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 99999999999999987653222 223345678999999999876 457999999999999999999999998776555
Q ss_pred hHHHHHHHhhccCC-chhhhcc---------CCCC-cccHH------HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 862 LAEWAWRHYAEEKP-ITDALDK---------GIAE-PCYLE------EMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 862 ~~~~~~~~~~~~~~-~~~~~~~---------~~~~-~~~~~------~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....+........+ .....+. .... ....+ ....+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 44444332221110 0000000 0000 00011 1356889999999999999999999987
No 242
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-37 Score=349.30 Aligned_cols=263 Identities=24% Similarity=0.290 Sum_probs=209.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC-----C
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE-----N 709 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 709 (969)
..+|+..+.||+|+||.||+|.+..+++.||||++... ......+.+.+|++++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 45899999999999999999999999999999998643 2344557899999999999999999999999654 4
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCC
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEF 789 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~ 789 (969)
..|+||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~ 165 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ--------------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTC 165 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCC
Confidence 6899999997 5999998753 388999999999999999999998 999999999999999999
Q ss_pred cEEEeecccceecccCCCCc-cccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 790 KAKIADFGLAKMLAKQGEPH-TMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 790 ~~kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
.+||+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.........+.
T Consensus 166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 245 (364)
T 3qyz_A 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245 (364)
T ss_dssp CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH
T ss_pred CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence 99999999998764432211 2345579999999998654 458999999999999999999999998876665555443
Q ss_pred HHhhccCCchhhhccC-------------CCCcc-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 868 RHYAEEKPITDALDKG-------------IAEPC-----YLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~-------------~~~~~-----~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....... .+..... ..... ....+..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 246 GILGSPS--QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHCSCC--HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCCCC--HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 3221111 0000000 00000 1122367899999999999999999999996
No 243
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.5e-38 Score=353.53 Aligned_cols=263 Identities=21% Similarity=0.223 Sum_probs=200.7
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc------
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS------ 707 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 707 (969)
..++|+..+.||+|+||.||+|.+..+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34689999999999999999999999999999999865432 23479999999999999999999843
Q ss_pred --------------------------------CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHH
Q 002085 708 --------------------------------ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIA 755 (969)
Q Consensus 708 --------------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 755 (969)
....++||||++ |+|.+.+..... ....+++..+..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---------~~~~l~~~~~~~i~ 147 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR---------SGRSIPMNLISIYI 147 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHH---------TTCCCCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh---------cCCCCCHHHHHHHH
Confidence 334789999998 588877764321 02358999999999
Q ss_pred HHHHHhhhhhcccCCCCeEecCCCCCcEEEC-CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCC
Q 002085 756 IGAAQGLCYMHHDCTPQIIHRDVKSSNILLD-SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNE 833 (969)
Q Consensus 756 ~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ 833 (969)
.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+|+.+... .......||+.|+|||.+.+. .++.
T Consensus 148 ~qi~~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~ 221 (383)
T 3eb0_A 148 YQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS---EPSVAYICSRFYRAPELMLGATEYTP 221 (383)
T ss_dssp HHHHHHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT---SCCCCCCCCSSCCCHHHHTTCSSCCT
T ss_pred HHHHHHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC---CCCcCcccCCCccCHHHhcCCCCCCc
Confidence 9999999999988 999999999999997 6889999999999876432 223345789999999998775 4899
Q ss_pred ccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccC---------CchhhhccCCCC-----cccHHHHHHHHHH
Q 002085 834 KIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEK---------PITDALDKGIAE-----PCYLEEMTTVYRL 899 (969)
Q Consensus 834 ~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-----~~~~~~~~~~~~l 899 (969)
++||||+||++|||++|+.||.+....+....+........ ...+...+.... ..+...+..+.++
T Consensus 222 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 222 SIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred chhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHH
Confidence 99999999999999999999987665544433332211110 000000000000 0112234678999
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002085 900 ALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 900 ~~~cl~~dP~~RPs~~evl~ 919 (969)
+.+||+.||++|||+.|+++
T Consensus 302 i~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhhCCCHHHHhc
Confidence 99999999999999999984
No 244
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-37 Score=337.30 Aligned_cols=262 Identities=26% Similarity=0.343 Sum_probs=211.5
Q ss_pred hhhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc
Q 002085 631 ESNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS 710 (969)
Q Consensus 631 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 710 (969)
...+.++|++.+.||+|+||.||+|++..+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence 345677899999999999999999999989999999998654322 2234678999999999999999999999999999
Q ss_pred eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC--
Q 002085 711 KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-- 788 (969)
Q Consensus 711 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-- 788 (969)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~ 159 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK-------------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEK 159 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred EEEEEEccCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCC
Confidence 999999999999999987543 388999999999999999999998 99999999999999764
Q ss_pred -CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 789 -FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 789 -~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
+.+||+|||+++..... .......||+.|+|||.+.+ .++.++||||+|+++|||++|..||.+.........+.
T Consensus 160 ~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 235 (287)
T 2wei_A 160 DCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235 (287)
T ss_dssp TCCEEECSTTGGGTBCCC---SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cccEEEeccCcceeecCC---CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 46999999999865332 22233458899999998875 58999999999999999999999998765443332221
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 924 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~ 924 (969)
. .... ...+.....+..+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 236 ~----~~~~-------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 236 T----GKYA-------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp H----CCCC-------CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred c----CCCC-------CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 1 1100 001111223467899999999999999999999997 45544
No 245
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1e-37 Score=341.50 Aligned_cols=255 Identities=24% Similarity=0.317 Sum_probs=202.2
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKL 712 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 712 (969)
+..+.|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 34568999999999999999999999899999999985432 223467889999999999999999999999999999
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEE
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAK 792 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 792 (969)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 93 lv~e~~~~~~l~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 157 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELD------------RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIR 157 (302)
T ss_dssp EEEECCTTEEHHHHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEE
T ss_pred EEEEeCCCCcHHHHHHhhc------------cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEE
Confidence 9999999999999987543 2488999999999999999999998 999999999999999999999
Q ss_pred EeecccceecccCCCCccccccccCcccCchhhc-----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002085 793 IADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA-----YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAW 867 (969)
Q Consensus 793 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 867 (969)
|+|||++...... ........||+.|+|||++ .+..++.++||||||+++|||++|..||............
T Consensus 158 l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~- 234 (302)
T 2j7t_A 158 LADFGVSAKNLKT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI- 234 (302)
T ss_dssp ECCCHHHHHHHHH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-
T ss_pred EEECCCCcccccc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH-
Confidence 9999998643221 1112335689999999988 3667899999999999999999999999765543222211
Q ss_pred HHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 868 RHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.....+ ....+...+..+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 235 --AKSDPP---------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --HHSCCC---------CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --hccCCc---------ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111110 00112223467899999999999999999998764
No 246
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=349.10 Aligned_cols=256 Identities=24% Similarity=0.318 Sum_probs=189.1
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEE--------
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCIS-------- 706 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-------- 706 (969)
.+|+..++||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 4789999999999999999999989999999988543 2344577899999999996 999999999984
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCC--eEecCCCCCcEE
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQ--IIHRDVKSSNIL 784 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~Nil 784 (969)
.....++||||++ |+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~----------~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl 170 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMES----------RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLL 170 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHT----------TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCE
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhc----------cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEE
Confidence 3345799999996 799999875332 13489999999999999999999988 7 999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCc----------cccccccCcccCchhhc---ccCCCCCccchhhHHHHHHHHHhCC
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPH----------TMSAVAGSFGYFAPEYA---YTTKVNEKIDIYSFGVVLLELVTGK 851 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~elltg~ 851 (969)
++.++.+||+|||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+
T Consensus 171 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~ 250 (337)
T 3ll6_A 171 LSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250 (337)
T ss_dssp ECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSS
T ss_pred ECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCC
Confidence 9999999999999998764432211 11134589999999998 5667889999999999999999999
Q ss_pred CCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 852 EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 852 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
.||.......... . ....+........+.+++.+||+.||++||++.|+++.|+++.
T Consensus 251 ~p~~~~~~~~~~~---~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 251 HPFEDGAKLRIVN---G--------------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp CCC-----------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcchhHHHhhc---C--------------cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9997543321111 0 0000111111245788999999999999999999999998885
No 247
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2e-37 Score=337.15 Aligned_cols=257 Identities=22% Similarity=0.276 Sum_probs=190.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+++.||||++..... .....+.+.++...++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3578999999999999999999999999999999865432 223344555566668888999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++ |+|.+++..... ....+++..++.++.|++.||+|||+.+ +|+||||||+||+++.++.+||+
T Consensus 85 ~e~~~-~~l~~~l~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~ 152 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVID---------KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMC 152 (290)
T ss_dssp EECCS-EEHHHHHHHHHH---------TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBC
T ss_pred Eehhc-cchHHHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEe
Confidence 99997 588888765321 0235899999999999999999999742 89999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhc----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA----YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
|||+++..... .......||+.|+|||.+ .+..++.++||||+||++|||++|+.||...... ........
T Consensus 153 Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~ 227 (290)
T 3fme_A 153 DFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVV 227 (290)
T ss_dssp CC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--HHHHHHHH
T ss_pred ecCCccccccc---ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch--HHHHHHHh
Confidence 99999876432 222334799999999996 5567889999999999999999999999753221 11111111
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.... ........+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 228 EEPS----------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HSCC----------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccCC----------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111 11111123467899999999999999999999986
No 248
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-37 Score=349.00 Aligned_cols=261 Identities=25% Similarity=0.325 Sum_probs=191.6
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC----
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE---- 708 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 708 (969)
.+.++|+..+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 34578999999999999999999999999999999986532 2344567889999999999999999999998654
Q ss_pred --CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 709 --NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 709 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
...|+|+||+ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~ 166 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKCQ--------------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 166 (367)
T ss_dssp GCCCCEEEEECC-CEECC-----C--------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred cCCeEEEEeccc-CCCHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEEC
Confidence 5679999999 68999888642 388999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
.++.+||+|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.......
T Consensus 167 ~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~ 241 (367)
T 2fst_X 167 EDCELKILDFGLARHTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241 (367)
T ss_dssp TTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CCCCEEEeeccccccccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999986532 2334678999999999887 6789999999999999999999999987765444443
Q ss_pred HHHHhhccCCchhhhcc-----------CC---CCc----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 866 AWRHYAEEKPITDALDK-----------GI---AEP----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~-----------~~---~~~----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
+.+..... ..+.... .+ ... ........+.+++.+||..||++|||+.|+++
T Consensus 242 i~~~~g~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 242 ILRLVGTP--GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHCSC--CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhCCC--CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 33322111 0010000 00 000 00112367889999999999999999999986
No 249
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-37 Score=352.98 Aligned_cols=349 Identities=17% Similarity=0.149 Sum_probs=182.3
Q ss_pred CCCCCCCCCCCC-CCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 002085 53 LQSWTSTSSPCD-WPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQN 131 (969)
Q Consensus 53 l~sw~~~~~~c~-w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 131 (969)
+++|..+.+||. |.++.|....++ +............-..++++++|++++|.++...+..|..+++|++|+|++|
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~---i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n 79 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVH---IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL 79 (390)
T ss_dssp ----CCEECBCC------EEEESCE---ECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTS
T ss_pred cCCCCCccceehhhhhhccceeeee---eecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCC
Confidence 578988888874 777777543322 2221111111222234567777777777776433344566777777777777
Q ss_pred cCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCC
Q 002085 132 YFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211 (969)
Q Consensus 132 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~ 211 (969)
.+++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|+++...+..|+++++|++|++++|
T Consensus 80 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n-------- 151 (390)
T 3o6n_A 80 QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN-------- 151 (390)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS--------
T ss_pred cccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCC--------
Confidence 776655666777777777777777776666666666666777777666666433333455555555555554
Q ss_pred CccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcc
Q 002085 212 PIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALK 291 (969)
Q Consensus 212 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 291 (969)
++.+..|..|.++++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 152 ------------------~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~--------- 201 (390)
T 3o6n_A 152 ------------------NLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL--------- 201 (390)
T ss_dssp ------------------CCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE---------
T ss_pred ------------------ccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc---------
Confidence 34444455566666666666666666532 123334444444444433310
Q ss_pred cccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCC
Q 002085 292 LTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGEL 371 (969)
Q Consensus 292 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 371 (969)
...++| +.|++++|+++..
T Consensus 202 -------------------~~~~~L-----------------------------------------~~L~l~~n~l~~~- 220 (390)
T 3o6n_A 202 -------------------AIPIAV-----------------------------------------EELDASHNSINVV- 220 (390)
T ss_dssp -------------------ECCSSC-----------------------------------------SEEECCSSCCCEE-
T ss_pred -------------------CCCCcc-----------------------------------------eEEECCCCeeeec-
Confidence 011123 3333333333211
Q ss_pred CcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCcccc
Q 002085 372 PTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHL 451 (969)
Q Consensus 372 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 451 (969)
|. ....+|+.|+|++|++++. ..+..+++|++|++++|.+++..|..|..+++|
T Consensus 221 ~~------------------------~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 221 RG------------------------PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp EC------------------------CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred cc------------------------cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 11 0112333344444444332 234445555555555555555555556666666
Q ss_pred chhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecC
Q 002085 452 NTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSN 530 (969)
Q Consensus 452 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N 530 (969)
+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++ +| +..++ |++|++++|
T Consensus 275 ~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N 349 (390)
T 3o6n_A 275 ERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHN 349 (390)
T ss_dssp CEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSS
T ss_pred CEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCC
Confidence 66666666665 34545555666666666666665 455556666666666666666653 22 33443 666666666
Q ss_pred cCCC
Q 002085 531 KLYG 534 (969)
Q Consensus 531 ~l~~ 534 (969)
++.+
T Consensus 350 ~~~~ 353 (390)
T 3o6n_A 350 DWDC 353 (390)
T ss_dssp CEEH
T ss_pred Cccc
Confidence 6654
No 250
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-37 Score=372.59 Aligned_cols=377 Identities=17% Similarity=0.148 Sum_probs=209.0
Q ss_pred CCCCCCCCCCCCC-CCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccC
Q 002085 52 SLQSWTSTSSPCD-WPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQ 130 (969)
Q Consensus 52 ~l~sw~~~~~~c~-w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 130 (969)
.+++|.++.+||. |.++.|....+. ++....... ....-..+++++.|++++|.++...+..|.++++|++|+|++
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~-i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~ 84 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVH-IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 84 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCE-ECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTT
T ss_pred cccCCCCCCcCcccCcCceeEecCce-ecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCC
Confidence 4688988888874 444444322221 111111111 111122355667777777777644444566677777777777
Q ss_pred CcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCC
Q 002085 131 NYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAM 210 (969)
Q Consensus 131 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~ 210 (969)
|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|
T Consensus 85 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N------- 157 (597)
T 3oja_B 85 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN------- 157 (597)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-------
T ss_pred CCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC-------
Confidence 7776666666667777777777777766666666666666666666666666444444455555555555544
Q ss_pred CCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc
Q 002085 211 IPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL 290 (969)
Q Consensus 211 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 290 (969)
++.+..|..|+++++|++|+|++|.+++. + +..+++|+.|++++|.+++.
T Consensus 158 -------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~l-------- 207 (597)
T 3oja_B 158 -------------------NLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLSTL-------- 207 (597)
T ss_dssp -------------------CCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSEE--------
T ss_pred -------------------cCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCccccc--------
Confidence 34555555566666666666666666533 1 22334444444444333210
Q ss_pred ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCC
Q 002085 291 KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE 370 (969)
Q Consensus 291 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 370 (969)
...+ +|+.|++++|.++..
T Consensus 208 --------------------~~~~-----------------------------------------~L~~L~ls~n~l~~~ 226 (597)
T 3oja_B 208 --------------------AIPI-----------------------------------------AVEELDASHNSINVV 226 (597)
T ss_dssp --------------------ECCT-----------------------------------------TCSEEECCSSCCCEE
T ss_pred --------------------cCCc-----------------------------------------hhheeeccCCccccc
Confidence 0111 233333333333311
Q ss_pred CCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccc
Q 002085 371 LPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSH 450 (969)
Q Consensus 371 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 450 (969)
|. ....+|+.|+|++|.+++. ..+..+++|+.|++++|.|++..|..|..+++
T Consensus 227 -~~------------------------~~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 227 -RG------------------------PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp -EC------------------------SCCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred -cc------------------------ccCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccC
Confidence 10 0112344444555554442 44556666666666666776666777777777
Q ss_pred cchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeec
Q 002085 451 LNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSS 529 (969)
Q Consensus 451 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~ 529 (969)
|+.|+|++|++++ +|..+..+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++. | ++.++ |+.|+|++
T Consensus 280 L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 280 LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSH 354 (597)
T ss_dssp CCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCS
T ss_pred CCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeC
Confidence 7777777777773 5666666777777777777777 5677777777777777777777643 3 44443 77777777
Q ss_pred CcCCCCCCcccccccccccccCCCCCCCCCCC
Q 002085 530 NKLYGNIPDEFNNLAYDDSFLNNSNLCVKNPI 561 (969)
Q Consensus 530 N~l~~~~p~~~~~~~~~~~~~~n~~l~~~~~~ 561 (969)
|++.+..+..+-.......+.++...|+....
T Consensus 355 N~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 355 NDWDCNSLRALFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp SCEEHHHHHHHTTTCCTTTBCCCCCCCCTTCE
T ss_pred CCCCChhHHHHHHHHhhhccccccccCCcchh
Confidence 77766433222111112345667777876444
No 251
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.8e-38 Score=357.05 Aligned_cols=262 Identities=26% Similarity=0.310 Sum_probs=198.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC------
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE------ 708 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 708 (969)
..+|+..++||+|+||.||+|++..+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 346889999999999999999999899999999986542 2234799999999999999999988532
Q ss_pred CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 709 NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 709 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
...++||||+++ ++.+.+..... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~---------~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~ 192 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSR---------AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPD 192 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHH---------TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETT
T ss_pred eeEEeehhcccc-cHHHHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCC
Confidence 236799999985 67666653211 023589999999999999999999988 99999999999999965
Q ss_pred -CcEEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 789 -FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 789 -~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
+.+||+|||+++.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+....+
T Consensus 193 ~~~~kl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i 269 (420)
T 1j1b_A 193 TAVLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269 (420)
T ss_dssp TTEEEECCCTTCEECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCeEEeccchhhhhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 568999999998764322 22345789999999998765 7899999999999999999999999876644333333
Q ss_pred HHHhhccC---------CchhhhccCCCCc-----ccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEEK---------PITDALDKGIAEP-----CYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+...... ...+...+.+... .....+..+.+++.+||+.||++||++.|+++
T Consensus 270 ~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 270 IKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 22211100 0000000000000 01122467899999999999999999999985
No 252
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-36 Score=338.93 Aligned_cols=260 Identities=19% Similarity=0.257 Sum_probs=207.6
Q ss_pred hccCCCccceeeecCcEEEEEEEE-cCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCc------eeeEEEEEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDI-NGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN------IVKLWCCIS 706 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~ 706 (969)
+.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++.
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 456899999999999999999998 557899999998543 234577889999999987654 999999999
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
+.+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~ 152 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKENGF-----------LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFV 152 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTT-----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhcCC-----------CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 999999999999 8999999986542 3488999999999999999999998 999999999999998
Q ss_pred C-------------------CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHH
Q 002085 787 S-------------------EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 847 (969)
Q Consensus 787 ~-------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el 847 (969)
. ++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 153 QSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp CCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ccccccccCCccccccccccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHH
Confidence 8 66899999999986432 22345789999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccchHHHHHHHhhccCCchhhhc-----------------------------cCC--CCcccHHHHHHH
Q 002085 848 VTGKEANYGDEHTSLAEWAWRHYAEEKPITDALD-----------------------------KGI--AEPCYLEEMTTV 896 (969)
Q Consensus 848 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~--~~~~~~~~~~~~ 896 (969)
++|..||...+.......+....... + ..... ... ........+..+
T Consensus 228 ~~g~~pf~~~~~~~~~~~~~~~~~~~-p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (339)
T 1z57_A 228 YLGFTVFPTHDSKEHLAMMERILGPL-P-KHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305 (339)
T ss_dssp HHSSCSCCCSCHHHHHHHHHHHHCSC-C-HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCC-C-HHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHH
Confidence 99999998765544333332221110 0 00000 000 001123456789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002085 897 YRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 897 ~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+++.+||+.||++|||+.|+++
T Consensus 306 ~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 306 FDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHhCcCcccccCHHHHhc
Confidence 99999999999999999999874
No 253
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.1e-37 Score=345.77 Aligned_cols=267 Identities=24% Similarity=0.324 Sum_probs=206.0
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcC----
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSE---- 708 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 708 (969)
.+.++|+..+.||+|+||.||+|.+..+|+.||||++.... .......+.+|++++++++||||+++++++...
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 85 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFEN 85 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTT
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCc
Confidence 34578999999999999999999999899999999985432 344456788999999999999999999988654
Q ss_pred -CceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 709 -NSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 709 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
...++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 86 ~~~~~lv~e~~~-~~L~~~~~~~--------------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~ 147 (353)
T 2b9h_A 86 FNEVYIIQELMQ-TDLHRVISTQ--------------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINS 147 (353)
T ss_dssp CCCEEEEECCCS-EEHHHHHHHC--------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred cceEEEEEeccC-ccHHHHHhhc--------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcC
Confidence 67899999997 6999998753 388999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCCCc--------cccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 002085 788 EFKAKIADFGLAKMLAKQGEPH--------TMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDE 858 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~ 858 (969)
++.+||+|||+++.+....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+
T Consensus 148 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp TCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999998764322111 1233578999999998765 678999999999999999999999998765
Q ss_pred ccchHHHHHHHhhccCCc-----------hhhhccC--CCC----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 859 HTSLAEWAWRHYAEEKPI-----------TDALDKG--IAE----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~--~~~----~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.......+.......... .+....- ... ......+..+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 228 YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 443333222221111000 0000000 000 001123467889999999999999999999987
No 254
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.4e-37 Score=340.57 Aligned_cols=268 Identities=26% Similarity=0.363 Sum_probs=189.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 4689999999999999999999988899999998854322 23456788999999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++....... ......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKG-----EHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTT-----TTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ehhccCCchHHHHHHHhhcc-----ccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 99999999999997532100 00123589999999999999999999998 99999999999999999999999
Q ss_pred ecccceecccCCC---CccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHh
Q 002085 795 DFGLAKMLAKQGE---PHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 795 Dfgla~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 870 (969)
|||++........ ........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||............ .
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~ 240 (303)
T 2vwi_A 164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT---L 240 (303)
T ss_dssp CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH---H
T ss_pred eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH---h
Confidence 9999976643221 112234568999999999876 56899999999999999999999999876544332221 1
Q ss_pred hccCC-chh-hhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 871 AEEKP-ITD-ALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 871 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....+ ... ..+... ....+..+.+++.+||+.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTTC-----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccccccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11111 000 001111 1122357889999999999999999999985
No 255
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.5e-36 Score=346.17 Aligned_cols=262 Identities=24% Similarity=0.291 Sum_probs=204.7
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc--------cCceeeEEEEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR--------HANIVKLWCCI 705 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~ 705 (969)
+.++|++.++||+|+||+||+|++..+++.||||++... ....+.+.+|+++++.++ ||||+++++++
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 346899999999999999999999999999999998543 344577889999999985 78899999998
Q ss_pred E----cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCC
Q 002085 706 S----SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSS 781 (969)
Q Consensus 706 ~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 781 (969)
. +....++||||+ +++|.+++..... ..+++..++.++.|++.||+|||+++ +|+||||||+
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~-----------~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~ 176 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSNY-----------QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPE 176 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTTT-----------SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGG
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhccc-----------CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHH
Confidence 7 556789999999 5677776654431 34899999999999999999999742 8999999999
Q ss_pred cEEECCCC-------------------------------------------------cEEEeecccceecccCCCCcccc
Q 002085 782 NILLDSEF-------------------------------------------------KAKIADFGLAKMLAKQGEPHTMS 812 (969)
Q Consensus 782 Nill~~~~-------------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~ 812 (969)
|||++.++ .+||+|||+++..... ..
T Consensus 177 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~ 251 (397)
T 1wak_A 177 NILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FT 251 (397)
T ss_dssp GEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SC
T ss_pred HeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----Cc
Confidence 99999775 7999999999876332 33
Q ss_pred ccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchH------HHHHHHhhccCCch---------
Q 002085 813 AVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLA------EWAWRHYAEEKPIT--------- 877 (969)
Q Consensus 813 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~------~~~~~~~~~~~~~~--------- 877 (969)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+....... ..+.... ...+..
T Consensus 252 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~ 330 (397)
T 1wak_A 252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL-GKVPRKLIVAGKYSK 330 (397)
T ss_dssp SCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH-CSCCHHHHHHCTTGG
T ss_pred cCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc-CCCChHHhhcccccc
Confidence 457899999999999999999999999999999999999999765433211 1111111 000000
Q ss_pred hhhccC-----C--------------CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 878 DALDKG-----I--------------AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 878 ~~~~~~-----~--------------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
+..... . ....+......+.+++.+||+.||++|||++|+++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 331 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp GTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000000 0 01224566788999999999999999999999986
No 256
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.2e-37 Score=351.24 Aligned_cols=263 Identities=24% Similarity=0.293 Sum_probs=196.5
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc--
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS-- 710 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 710 (969)
....+|+..++||+|+||.||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++...+.
T Consensus 37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~ 108 (394)
T 4e7w_A 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKK 108 (394)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSS
T ss_pred cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCC
Confidence 345679999999999999999999986665 88888754432 22369999999999999999999855433
Q ss_pred ----eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 711 ----KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 711 ----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
.++||||++++.+......... ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 109 ~~~~~~lv~e~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~ 175 (394)
T 4e7w_A 109 DEVFLNLVLEYVPETVYRASRHYAKL----------KQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLD 175 (394)
T ss_dssp SCEEEEEEEECCSEEHHHHHHHHHHT----------TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred CceEEEEEeeccCccHHHHHHHHHhh----------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEc
Confidence 7899999986544333321111 23588999999999999999999998 999999999999999
Q ss_pred -CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 787 -SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 787 -~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
.++.+||+|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+......
T Consensus 176 ~~~~~~kL~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~ 252 (394)
T 4e7w_A 176 PPSGVLKLIDFGSAKILIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252 (394)
T ss_dssp TTTTEEEECCCTTCEECCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CCCCcEEEeeCCCcccccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 78999999999998764322 23346789999999998765 58999999999999999999999998776544433
Q ss_pred HHHHHhhccCC--c----hhhhccCC---CC-----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKP--I----TDALDKGI---AE-----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~--~----~~~~~~~~---~~-----~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+.+....... + ........ .. ......+.++.+++.+||+.||++|||+.|+++
T Consensus 253 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 253 EIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 33222111000 0 00000000 00 011123468899999999999999999999986
No 257
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=340.30 Aligned_cols=253 Identities=22% Similarity=0.302 Sum_probs=198.6
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEc-----
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISS----- 707 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----- 707 (969)
..++|+..+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+++++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 45689999999999999999999998999999999864322 235788999999999 79999999999876
Q ss_pred -CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 708 -ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 708 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
.+..++||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~ 163 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKG-----------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLT 163 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGG-----------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhccc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEc
Confidence 4678999999999999999986532 3588999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhcc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccc
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTS 861 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~ 861 (969)
.++.+||+|||++...... ........||+.|+|||++. +..++.++|||||||++|||++|..||.+.....
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 241 (326)
T 2x7f_A 164 ENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241 (326)
T ss_dssp TTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred CCCCEEEeeCcCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH
Confidence 9999999999999865432 11223457899999999987 5678999999999999999999999997654332
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 862 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....+. .... +.. .....+..+.+++.+||..||++||++.|+++
T Consensus 242 ~~~~~~---~~~~-------~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 242 ALFLIP---RNPA-------PRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHH---HSCC-------CCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhh---cCcc-------ccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 221111 1110 000 11112367889999999999999999999987
No 258
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.6e-37 Score=342.37 Aligned_cols=261 Identities=22% Similarity=0.302 Sum_probs=202.6
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHH-HhccccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEI-LGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|++..+|+.||||++..... ......+..|..+ ++.++||||+++++++.+++..++
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 4578889999999999999999988999999999865432 2233455556655 777899999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++ +|.+++..... ....+++..++.++.|++.||+|||+.. +|+||||||+||+++.++.+||
T Consensus 128 v~e~~~~-~L~~~l~~~~~---------~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl 195 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVID---------KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKM 195 (340)
T ss_dssp EECCCSE-EHHHHHHHHHH---------TSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEE
T ss_pred EHHHhhC-cHHHHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEE
Confidence 9999985 99998875321 0135899999999999999999999631 8999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhccc----CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT----TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
+|||+++.+.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+...
T Consensus 196 ~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~--~~~~~~~ 270 (340)
T 3an0_A 196 CDFGISGYLVD---SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQV 270 (340)
T ss_dssp CCCSHHHHHSC---HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--HHHHHHH
T ss_pred eeCCCceeccc---ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch--HHHHHHH
Confidence 99999986632 222334579999999999643 47889999999999999999999999753321 1111111
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhc
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ--ILRRC 924 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~--~L~~~ 924 (969)
..... ........+..+.+++.+||+.||++||++.|+++ .+...
T Consensus 271 ~~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 317 (340)
T 3an0_A 271 VEEPS----------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317 (340)
T ss_dssp HHSCC----------CCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred hcCCC----------CCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccc
Confidence 11111 01111123467899999999999999999999986 44443
No 259
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-36 Score=343.38 Aligned_cols=260 Identities=22% Similarity=0.296 Sum_probs=204.7
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce-
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK- 711 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 711 (969)
++.++|...+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+++++.++||||+++++++...+..
T Consensus 39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 117 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence 34578999999999999999999999999999999996543 2345567899999999999999999999999877654
Q ss_pred -----EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 712 -----LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 712 -----~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~ 178 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIMGM---------------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVN 178 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHTTS---------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred cceeEEEEEcccc-ccHHHHhhc---------------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEEC
Confidence 99999997 688888742 388999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHH
Q 002085 787 SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEW 865 (969)
Q Consensus 787 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 865 (969)
.++.+||+|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+....
T Consensus 179 ~~~~~kL~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 253 (371)
T 4exu_A 179 EDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 253 (371)
T ss_dssp TTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CCCCEEEEecCccccccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999999999999986532 2334578999999999887 6789999999999999999999999987665444333
Q ss_pred HHHHhhccCCchhhhc---------------cCCCC---cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 866 AWRHYAEEKPITDALD---------------KGIAE---PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
+....... ..+... ..... ......+..+.+++.+||+.||++|||++|+++
T Consensus 254 i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 254 ILKVTGVP--GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHCCC--CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhCCC--cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 32211110 000000 00000 001122467899999999999999999999986
No 260
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.2e-37 Score=348.33 Aligned_cols=263 Identities=19% Similarity=0.275 Sum_probs=206.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHH--------------HHHHHHHHHHHHhccccCcee
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQK--------------LEKEFIAEIEILGTIRHANIV 699 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~E~~~l~~l~h~niv 699 (969)
..++|+..+.||+|+||.||+|++ +++.||||++......... ..+.+.+|++++++++||||+
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 457899999999999999999999 7999999998654322111 127899999999999999999
Q ss_pred eEEEEEEcCCceEEEEeeccCCCHHHH------hccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcc-cCCCC
Q 002085 700 KLWCCISSENSKLLVYEYMENQSLDRW------LHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQ 772 (969)
Q Consensus 700 ~l~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ 772 (969)
++++++.+.+..++||||+++++|.++ +.... ...+++..++.++.|++.||+|||+ . +
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-----------~~~~~~~~~~~i~~qi~~~l~~lH~~~---~ 172 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-----------TCFIPIQVIKCIIKSVLNSFSYIHNEK---N 172 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-----------CCCCCHHHHHHHHHHHHHHHHHHHHTS---C
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-----------ccCCCHHHHHHHHHHHHHHHHHHhccC---C
Confidence 999999999999999999999999998 44321 2458999999999999999999998 7 9
Q ss_pred eEecCCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccC-CCCC-ccchhhHHHHHHHHHhC
Q 002085 773 IIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTT-KVNE-KIDIYSFGVVLLELVTG 850 (969)
Q Consensus 773 ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslG~il~elltg 850 (969)
|+||||||+||+++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||+||++|||++|
T Consensus 173 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g 248 (348)
T 2pml_X 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN 248 (348)
T ss_dssp EECCCCCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred EeecCCChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999999999876332 34456799999999999887 6666 99999999999999999
Q ss_pred CCCCCCCCc-cchHHHHHHHhhccCCchhh----hccCC---CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 851 KEANYGDEH-TSLAEWAWRHYAEEKPITDA----LDKGI---AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 851 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..||..... ......+. ......... ..... ........+..+.+++.+||+.||++||++.|+++
T Consensus 249 ~~pf~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 249 VVPFSLKISLVELFNNIR---TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp SCSSCCSSCSHHHHHHHT---SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCCCCCcHHHHHHHHh---ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 999986654 22222211 111110000 00000 00001223467899999999999999999999986
No 261
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=338.06 Aligned_cols=271 Identities=23% Similarity=0.325 Sum_probs=200.7
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE------
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS------ 706 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~------ 706 (969)
.+.++|+..+.||+|+||.||+|.+..+++.||+|++... +....+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQL 84 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBC
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccc
Confidence 3456899999999999999999999989999999998543 3445678999999999999999999999874
Q ss_pred --------cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCC
Q 002085 707 --------SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDV 778 (969)
Q Consensus 707 --------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 778 (969)
+....++||||++ |+|.+++... .+++..++.++.|++.||+|||+. +|+||||
T Consensus 85 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl 146 (320)
T 2i6l_A 85 TDDVGSLTELNSVYIVQEYME-TDLANVLEQG--------------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDL 146 (320)
T ss_dssp CC----CCSCSEEEEEEECCS-EEHHHHHTTC--------------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred ccccccccccCceeEEeeccC-CCHHHHhhcC--------------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 3467899999998 6999998642 378899999999999999999998 9999999
Q ss_pred CCCcEEEC-CCCcEEEeecccceecccCCC-CccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCC
Q 002085 779 KSSNILLD-SEFKAKIADFGLAKMLAKQGE-PHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANY 855 (969)
Q Consensus 779 kp~Nill~-~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~ 855 (969)
||+||+++ +++.+||+|||+++....... ........+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 147 kp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 226 (320)
T 2i6l_A 147 KPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA 226 (320)
T ss_dssp SGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCC
Confidence 99999997 567999999999987643211 122234567999999998865 678999999999999999999999998
Q ss_pred CCCccchHHHHHHHhhccC---------CchhhhccCCCC------cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-
Q 002085 856 GDEHTSLAEWAWRHYAEEK---------PITDALDKGIAE------PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ- 919 (969)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~------~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~- 919 (969)
+.........+........ .+.......... ......+..+.+++.+||+.||++||++.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 227 GAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 7654433332222111000 000000000000 001123467899999999999999999999986
Q ss_pred -HHhhc
Q 002085 920 -ILRRC 924 (969)
Q Consensus 920 -~L~~~ 924 (969)
.+...
T Consensus 307 p~~~~~ 312 (320)
T 2i6l_A 307 PYMSIY 312 (320)
T ss_dssp HHHHTT
T ss_pred cccccc
Confidence 44443
No 262
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.4e-37 Score=338.24 Aligned_cols=267 Identities=24% Similarity=0.326 Sum_probs=206.2
Q ss_pred hccCCCccceeeecCcEEEEEEEEc-CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc---ccCceeeEEEEEE---
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDIN-GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI---RHANIVKLWCCIS--- 706 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 706 (969)
..++|+..+.||+|+||.||+|++. .+|+.||+|++...... ......+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3468999999999999999999995 67899999998654321 11123466777777766 8999999999987
Q ss_pred --cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEE
Q 002085 707 --SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNIL 784 (969)
Q Consensus 707 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nil 784 (969)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nil 152 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE-----------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNIL 152 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT-----------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeE
Confidence 5567899999998 699999986542 3488999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 785 LDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 785 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
++.++.+||+|||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+........
T Consensus 153 i~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 229 (326)
T 1blx_A 153 VTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229 (326)
T ss_dssp ECTTCCEEECSCCSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EcCCCCEEEecCcccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 99999999999999986532 223345678999999999999999999999999999999999999998776554444
Q ss_pred HHHHHhhccCC--ch------h-hhccC---CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKP--IT------D-ALDKG---IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~--~~------~-~~~~~---~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+......... .. . ..... .........+..+.+++.+||+.||++||++.|+++
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 33332211100 00 0 00000 000111223467889999999999999999999985
No 263
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.3e-37 Score=334.83 Aligned_cols=254 Identities=23% Similarity=0.383 Sum_probs=195.3
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc------
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS------ 707 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 707 (969)
+.++|+..+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 456789999999999999999999989999999998542 3445789999999999999999999998754
Q ss_pred -------CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCC
Q 002085 708 -------ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKS 780 (969)
Q Consensus 708 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 780 (969)
.+..|+||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp 144 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN------------LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKP 144 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC------------GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc------------cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCH
Confidence 356799999999999999998643 2477889999999999999999998 999999999
Q ss_pred CcEEECCCCcEEEeecccceecccCCC------------CccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHH
Q 002085 781 SNILLDSEFKAKIADFGLAKMLAKQGE------------PHTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLEL 847 (969)
Q Consensus 781 ~Nill~~~~~~kl~Dfgla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el 847 (969)
+||+++.++.+||+|||+++....... ........||+.|+|||.+.+. .++.++||||+||++|||
T Consensus 145 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 224 (303)
T 1zy4_A 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224 (303)
T ss_dssp GGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHH
T ss_pred HhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999986543211 1222345689999999998864 689999999999999999
Q ss_pred HhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 848 VTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 848 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
++ ||..... ... ........ ............+..+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~---p~~~~~~--~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 225 IY---PFSTGME--RVN-ILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HS---CCSSHHH--HHH-HHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Hh---ccCCchh--HHH-HHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 98 4432211 111 11111111 011111222333467889999999999999999999986
No 264
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6.5e-37 Score=339.97 Aligned_cols=255 Identities=21% Similarity=0.291 Sum_probs=176.4
Q ss_pred hhccCCCccc-eeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc----
Q 002085 633 NILSSLTESN-LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS---- 707 (969)
Q Consensus 633 ~~~~~~~~~~-~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 707 (969)
.+.++|.+.+ +||+|+||.||+|.+..+++.||||++.... . ...+....++.++||||+++++++..
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----K---ARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----H---HHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 4567888854 6999999999999999999999999985431 1 11222234556799999999999876
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
....++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~~-----------~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~ 163 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERGD-----------QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTS 163 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC-C-----------CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESC
T ss_pred CceEEEEEeccCCCCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEe
Confidence 4458999999999999999986542 3589999999999999999999998 9999999999999986
Q ss_pred C---CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 788 E---FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 788 ~---~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
+ +.+||+|||+++.... .......||+.|+|||++.+..++.++||||+||++|||++|..||..........
T Consensus 164 ~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 239 (336)
T 3fhr_A 164 KEKDAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 239 (336)
T ss_dssp SSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cCCCceEEEeccccceeccc----cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh
Confidence 4 4599999999986532 22334578999999999988889999999999999999999999997654433211
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......... ......+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 240 GMKRRIRLG-------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHhhhcc-------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111000 001111122234467899999999999999999999997
No 265
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.4e-37 Score=344.99 Aligned_cols=267 Identities=24% Similarity=0.263 Sum_probs=199.6
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccch--------hcHHHHHHHHHHHHHHhccccCceeeEEEE
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK--------LNQKLEKEFIAEIEILGTIRHANIVKLWCC 704 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 704 (969)
.+.++|+..+.||+|+||.||+|.+.. |+.||||++..... .+....+.+.+|++++++++||||++++++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 456789999999999999999998864 89999999854322 223445789999999999999999999999
Q ss_pred EEc-----CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCC
Q 002085 705 ISS-----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 779 (969)
Q Consensus 705 ~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 779 (969)
+.. ....|+||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+|||||
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 161 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR------------IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLH 161 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTT------------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCC
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcc------------cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCC
Confidence 843 335799999998 68888887543 2489999999999999999999998 99999999
Q ss_pred CCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCC
Q 002085 780 SSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDE 858 (969)
Q Consensus 780 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~ 858 (969)
|+||+++.++.+||+|||+++.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..
T Consensus 162 p~NIl~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 162 PGNILLADNNDITICDFNLAREDTA---DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp GGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred hHHEEEcCCCCEEEEecCccccccc---ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999975432 222344578999999999877 678999999999999999999999998766
Q ss_pred ccchHHHHHHHhhccCC----------chhhhccCCC---C----cccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 859 HTSLAEWAWRHYAEEKP----------ITDALDKGIA---E----PCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 859 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~---~----~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.......+......... ..+....... . .........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 239 FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 54443333222111100 0000000000 0 011122467889999999999999999999986
No 266
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1e-36 Score=342.57 Aligned_cols=268 Identities=22% Similarity=0.283 Sum_probs=192.6
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc-
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS- 710 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 710 (969)
....++|+..+.||+|+||.||+|++..+|+.||||++...... .....+|++.++.++||||+++++++...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 34567899999999999999999999989999999988554322 2345677888888999999999999865433
Q ss_pred ------eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhc--ccCCCCeEecCCCCCc
Q 002085 711 ------KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH--HDCTPQIIHRDVKSSN 782 (969)
Q Consensus 711 ------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlkp~N 782 (969)
.++||||+++ +|.+.+..... ....+++..+..++.|++.|+.||| +. +|+||||||+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~N 161 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR---------RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHN 161 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT---------TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGG
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh---------cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHH
Confidence 7899999985 55554442111 0234788999999999999999999 66 99999999999
Q ss_pred EEECC-CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCC-CCCccchhhHHHHHHHHHhCCCCCCCCCcc
Q 002085 783 ILLDS-EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTK-VNEKIDIYSFGVVLLELVTGKEANYGDEHT 860 (969)
Q Consensus 783 ill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~elltg~~p~~~~~~~ 860 (969)
|+++. ++.+||+|||+++.+... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+....
T Consensus 162 Ill~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 238 (360)
T 3e3p_A 162 VLVNEADGTLKLCDFGSAKKLSPS---EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238 (360)
T ss_dssp EEEETTTTEEEECCCTTCBCCCTT---SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EEEeCCCCcEEEeeCCCceecCCC---CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH
Confidence 99997 899999999999876432 2233457899999999987654 899999999999999999999999887655
Q ss_pred chHHHHHHHhhccCC-chhhhccC-----------C-----CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 861 SLAEWAWRHYAEEKP-ITDALDKG-----------I-----AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 861 ~~~~~~~~~~~~~~~-~~~~~~~~-----------~-----~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.....+.+....... ......+. . ........+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 239 GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 444443332211100 00000000 0 00111123578999999999999999999999986
No 267
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.8e-37 Score=369.14 Aligned_cols=258 Identities=24% Similarity=0.322 Sum_probs=207.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCC---CcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCce
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGA---GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSK 711 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 711 (969)
.++|+..+.||+|+||.||+|.+..+ +..||+|.++.. ......+.+.+|+.++++++||||+++++++. ++..
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 35788899999999999999998543 457999987543 23455678999999999999999999999985 4568
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcE
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKA 791 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 791 (969)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~v 530 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK------------FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 530 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT------------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred EEEEEcCCCCcHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCE
Confidence 99999999999999998643 2488999999999999999999998 99999999999999999999
Q ss_pred EEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHHHHHHh
Q 002085 792 KIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEWAWRHY 870 (969)
Q Consensus 792 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 870 (969)
||+|||+++..... .........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.........+...
T Consensus 531 kL~DFG~a~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~- 608 (656)
T 2j0j_A 531 KLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG- 608 (656)
T ss_dssp EECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-
T ss_pred EEEecCCCeecCCC-cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-
Confidence 99999999876432 2222334557889999999999999999999999999999997 88888776544433322211
Q ss_pred hccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002085 871 AEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCC 925 (969)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 925 (969)
. ..+.+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 609 ---~----------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 609 ---E----------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp ---C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---C----------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 11122233467899999999999999999999999998874
No 268
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=9.6e-37 Score=335.60 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=196.0
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc--cCceeeEEEEEEcCCceEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR--HANIVKLWCCISSENSKLL 713 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 713 (969)
++|+..+.||+|+||.||+|.+. +++.||||++.... ......+.+.+|++++++++ ||||+++++++.+++..++
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 56999999999999999999886 58899999986543 23455678999999999997 5999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||| +.+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++ +.+||
T Consensus 106 v~e-~~~~~L~~~l~~~~-------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK-------------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS-------------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEE
T ss_pred EEe-cCCCcHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEE
Confidence 999 56799999998654 378999999999999999999998 9999999999999965 89999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCCCCccch
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-----------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 862 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 862 (969)
+|||+++.+.............||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 168 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-- 245 (313)
T 3cek_A 168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-- 245 (313)
T ss_dssp CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--
T ss_pred eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH--
Confidence 99999987654333333345579999999999875 46888999999999999999999999754321
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
........ +.......+...+..+.+++.+||+.||++||++.|+++
T Consensus 246 ~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 246 ISKLHAII----------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHHHHH----------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH----------hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11111111 111111111122367889999999999999999999986
No 269
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.9e-36 Score=336.30 Aligned_cols=260 Identities=20% Similarity=0.247 Sum_probs=205.3
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCC-cEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCc------eeeEEEEEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAG-EFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN------IVKLWCCIS 706 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~ 706 (969)
+.++|++.+.||+|+||.||+|.+..++ +.||+|+++.. ....+.+.+|+++++.++|++ ++.+.+++.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 3568999999999999999999997766 78999998543 234567889999999997766 999999999
Q ss_pred cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE-
Q 002085 707 SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL- 785 (969)
Q Consensus 707 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill- 785 (969)
..+..++||||+ ++++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~ 157 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENNF-----------QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFV 157 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTT-----------CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEES
T ss_pred eCCeEEEEEecc-CCChHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEe
Confidence 999999999999 6777777765432 3488999999999999999999988 99999999999999
Q ss_pred ------------------CCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHH
Q 002085 786 ------------------DSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLEL 847 (969)
Q Consensus 786 ------------------~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el 847 (969)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp CCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccCCCcEEEeecCccccccc-----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 5678999999999986432 22345799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccchHHHHHHHhhccCCchhhhcc----------C---------------------CCCcccHHHHHHH
Q 002085 848 VTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDK----------G---------------------IAEPCYLEEMTTV 896 (969)
Q Consensus 848 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---------------------~~~~~~~~~~~~~ 896 (969)
++|+.||...........+....... + ...... . ............+
T Consensus 233 ~~g~~pf~~~~~~~~~~~~~~~~~~~-p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 310 (355)
T 2eu9_A 233 YRGFTLFQTHENREHLVMMEKILGPI-P-SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL 310 (355)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCC-C-HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHHcCCC-c-HHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHH
Confidence 99999998765544333332221110 0 000000 0 0001123345688
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002085 897 YRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 897 ~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.+++.+||+.||++|||++|+++
T Consensus 311 ~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 311 FDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCcCHHHHhc
Confidence 99999999999999999999874
No 270
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=338.73 Aligned_cols=261 Identities=21% Similarity=0.288 Sum_probs=203.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc---
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS--- 710 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 710 (969)
+.++|...+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+.
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 4568999999999999999999999999999999986543 234456789999999999999999999999987654
Q ss_pred ---eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 711 ---KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 711 ---~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
.|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~---------------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~ 161 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMGL---------------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNE 161 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTTS---------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECT
T ss_pred ceeEEEEecccc-CCHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECC
Confidence 499999997 688877642 388999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecccceecccCCCCccccccccCcccCchhhccc-CCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002085 788 EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT-TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWA 866 (969)
Q Consensus 788 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 866 (969)
++.+||+|||+++.... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.+.......+
T Consensus 162 ~~~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i 236 (353)
T 3coi_A 162 DCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236 (353)
T ss_dssp TCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHH
T ss_pred CCcEEEeecccccCCCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999976432 1234578999999999887 67899999999999999999999999876654433333
Q ss_pred HHHhhccCC-c---------hhh---hccCC---CCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 867 WRHYAEEKP-I---------TDA---LDKGI---AEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 867 ~~~~~~~~~-~---------~~~---~~~~~---~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......... . ... +.... ........+..+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 221111000 0 000 00000 00111233578899999999999999999999986
No 271
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=342.78 Aligned_cols=259 Identities=23% Similarity=0.309 Sum_probs=201.8
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++.. .||+|+++.... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 4678999999999999999999853 399999865432 222235678899999999999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+
T Consensus 108 ~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~ 171 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK------------IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVIT 171 (319)
T ss_dssp CBCCCSEEHHHHTTSSC------------CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEEC
T ss_pred eecccCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEe
Confidence 99999999999997643 2488999999999999999999998 999999999999998 6799999
Q ss_pred ecccceecccCC---CCccccccccCcccCchhhccc---------CCCCCccchhhHHHHHHHHHhCCCCCCCCCccch
Q 002085 795 DFGLAKMLAKQG---EPHTMSAVAGSFGYFAPEYAYT---------TKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSL 862 (969)
Q Consensus 795 Dfgla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 862 (969)
|||+++...... .........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 251 (319)
T 2y4i_B 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251 (319)
T ss_dssp CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999987653211 1122234568999999999874 3578899999999999999999999976654333
Q ss_pred HHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 863 AEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
...+... .. +... ....+..+.+++.+||..||++||++.|++++|+++..
T Consensus 252 ~~~~~~~---~~-------~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 252 IWQMGTG---MK-------PNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HHHHHTT---CC-------CCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred HHHhccC---CC-------CCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 2222111 00 0000 01122568899999999999999999999999999864
No 272
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=348.12 Aligned_cols=272 Identities=21% Similarity=0.316 Sum_probs=185.1
Q ss_pred ccCCCc-cceeeecCcEEEEEEEEc--CCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE--cCC
Q 002085 635 LSSLTE-SNLIGSGGSGQVYRIDIN--GAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS--SEN 709 (969)
Q Consensus 635 ~~~~~~-~~~lG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~ 709 (969)
.+.|.. .++||+|+||.||+|++. .+++.||||++..... ...+.+|++++++++||||+++++++. ...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 344554 568999999999999975 4678999999864432 246788999999999999999999985 467
Q ss_pred ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEE----
Q 002085 710 SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILL---- 785 (969)
Q Consensus 710 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill---- 785 (969)
..|+||||++ ++|.+++........ ......+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~----~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~ 165 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKA----NKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEG 165 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSS
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccc----cccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCC
Confidence 8899999997 588888864332100 00122489999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeecccceecccCCCC-ccccccccCcccCchhhcccC-CCCCccchhhHHHHHHHHHhCCCCCCCCCcc---
Q 002085 786 DSEFKAKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAYTT-KVNEKIDIYSFGVVLLELVTGKEANYGDEHT--- 860 (969)
Q Consensus 786 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~--- 860 (969)
+.++.+||+|||+++.+...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....
T Consensus 166 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 245 (405)
T 3rgf_A 166 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 245 (405)
T ss_dssp TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-----
T ss_pred CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccc
Confidence 67789999999999876432221 233456799999999999874 5899999999999999999999999765431
Q ss_pred ------chHHHHHHHhhccC--Cchhh---------hc---cCCCCccc---------HHHHHHHHHHHHHccCCCCCCC
Q 002085 861 ------SLAEWAWRHYAEEK--PITDA---------LD---KGIAEPCY---------LEEMTTVYRLALICTSTLPSSR 911 (969)
Q Consensus 861 ------~~~~~~~~~~~~~~--~~~~~---------~~---~~~~~~~~---------~~~~~~~~~l~~~cl~~dP~~R 911 (969)
.....+........ ..... .. ........ ......+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R 325 (405)
T 3rgf_A 246 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 325 (405)
T ss_dssp -CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGS
T ss_pred cccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccC
Confidence 11111111111000 00000 00 00000000 0013567899999999999999
Q ss_pred CCHHHHHH
Q 002085 912 PSMKEVLQ 919 (969)
Q Consensus 912 Ps~~evl~ 919 (969)
||++|+++
T Consensus 326 ~ta~e~L~ 333 (405)
T 3rgf_A 326 ITSEQAMQ 333 (405)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999997
No 273
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=351.92 Aligned_cols=175 Identities=23% Similarity=0.224 Sum_probs=119.3
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.+++++++++ .+|..+. +++++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3444455544 2444332 467778888888877667777777777777777777777677777777777777777777
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCc
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIP 236 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 236 (969)
+++..+..|.++++|++|+|++|++++..|..|.++++|++|++++| ++.+..|
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n--------------------------~l~~~~~ 145 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN--------------------------DLVYISH 145 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCT--------------------------TCCEECT
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCC--------------------------ccceeCh
Confidence 77555555677777777777777777666666666666666666555 3555566
Q ss_pred hhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccc
Q 002085 237 EAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280 (969)
Q Consensus 237 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (969)
..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.++
T Consensus 146 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 189 (477)
T 2id5_A 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN 189 (477)
T ss_dssp TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC
T ss_pred hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc
Confidence 67777888888888888887655555666666666666665554
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.9e-36 Score=333.94 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=180.9
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHH-HHhccccCceeeEEEEEEcCCceEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIE-ILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
.++|+..+.||+|+||.||+|.+..+|+.||||++..... ......+..|+. +++.++||||+++++++.+++..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 3678899999999999999999998999999999965432 233345556665 7777899999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||+++ +|.+++...... ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||
T Consensus 99 v~e~~~~-~l~~~~~~~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl 167 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSV--------LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKL 167 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHT--------TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEE
T ss_pred EEeecCC-ChHHHHHHHHhh--------hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEE
Confidence 9999985 888887642110 0235889999999999999999999742 8999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhc----ccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHH
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA----YTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRH 869 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 869 (969)
+|||+++.+... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ...
T Consensus 168 ~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~--- 239 (327)
T 3aln_A 168 CDFGISGQLVDS---IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQL--- 239 (327)
T ss_dssp CCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------
T ss_pred ccCCCceecccc---cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHH---
Confidence 999999866432 222334789999999998 45678999999999999999999999997532210 000
Q ss_pred hhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 870 YAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. .........+........+..+.+++.+||+.||++||++.|+++
T Consensus 240 -~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 240 -T---QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -C---CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -H---HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0 000000011111111223467899999999999999999999975
No 275
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=332.76 Aligned_cols=247 Identities=24% Similarity=0.313 Sum_probs=194.5
Q ss_pred hhhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---HHHHHHHHHHHHHhcc----ccCceeeEEEE
Q 002085 632 SNILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTI----RHANIVKLWCC 704 (969)
Q Consensus 632 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l----~h~niv~l~~~ 704 (969)
+.+.++|+..+.||+|+||.||+|++..+++.||||++........ .....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 4456789999999999999999999988999999999865432221 2234567799999988 89999999999
Q ss_pred EEcCCceEEEEee-ccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcE
Q 002085 705 ISSENSKLLVYEY-MENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNI 783 (969)
Q Consensus 705 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Ni 783 (969)
+.+.+..++|||| +++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 170 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG-------------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENI 170 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhE
Confidence 9999999999999 78999999998643 388999999999999999999998 999999999999
Q ss_pred EEC-CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCC-CccchhhHHHHHHHHHhCCCCCCCCCccc
Q 002085 784 LLD-SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVN-EKIDIYSFGVVLLELVTGKEANYGDEHTS 861 (969)
Q Consensus 784 ll~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~elltg~~p~~~~~~~~ 861 (969)
+++ .++.+||+|||+++..... ......|++.|+|||++.+..+. .++||||+||++|||++|+.||.....
T Consensus 171 l~~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-- 244 (312)
T 2iwi_A 171 LIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-- 244 (312)
T ss_dssp EEETTTTEEEECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--
T ss_pred EEeCCCCeEEEEEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--
Confidence 999 7899999999999876432 23445689999999998877765 489999999999999999999864311
Q ss_pred hHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 862 LAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. ..... ..+...+..+.+++.+||+.||++||++.|+++
T Consensus 245 ----~---~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 ----I---LEAEL------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----H---HHTCC------------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----H---hhhcc------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000 011123367889999999999999999999987
No 276
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-36 Score=335.70 Aligned_cols=246 Identities=23% Similarity=0.316 Sum_probs=202.0
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---HHHHHHHHHHHHHhccc--cCceeeEEEEEEc
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---KLEKEFIAEIEILGTIR--HANIVKLWCCISS 707 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 707 (969)
.+.++|+..+.||+|+||.||+|.+..+++.||||++........ ...+.+.+|++++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 345689999999999999999999999999999999965432210 12245778999999996 5999999999999
Q ss_pred CCceEEEEeeccC-CCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEEC
Q 002085 708 ENSKLLVYEYMEN-QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLD 786 (969)
Q Consensus 708 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~ 786 (969)
++..++||||+.+ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-------------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 183 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-------------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILID 183 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-------------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEe
Confidence 9999999999976 89999998643 388999999999999999999998 999999999999999
Q ss_pred -CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCC-CCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 787 -SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKV-NEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 787 -~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
.++.+||+|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 184 ~~~~~~kL~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----- 254 (320)
T 3a99_A 184 LNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----- 254 (320)
T ss_dssp TTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----
T ss_pred CCCCCEEEeeCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----
Confidence 7789999999999876432 2334579999999999987776 6789999999999999999999864311
Q ss_pred HHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 865 WAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
. ...... . ....+..+.+++.+||+.||++||++.|+++
T Consensus 255 -~---~~~~~~--------~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 -I---IRGQVF--------F----RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -H---HHCCCC--------C----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -h---hccccc--------c----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 001000 0 1112367889999999999999999999976
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.7e-36 Score=336.72 Aligned_cols=266 Identities=21% Similarity=0.249 Sum_probs=204.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-----------cCceeeEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-----------HANIVKLWC 703 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~ 703 (969)
..+|+..+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 45899999999999999999999989999999998543 234567889999999886 899999999
Q ss_pred EEEcCC----ceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCC
Q 002085 704 CISSEN----SKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVK 779 (969)
Q Consensus 704 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 779 (969)
++...+ ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+.+ +|+|||||
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-----------~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dik 159 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-----------RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIK 159 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-----------SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCS
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhc-----------cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCC
Confidence 987644 789999999 8999999986542 34889999999999999999999742 89999999
Q ss_pred CCcEEEC------CCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCC
Q 002085 780 SSNILLD------SEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 853 (969)
Q Consensus 780 p~Nill~------~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p 853 (969)
|+||+++ ..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 160 p~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 234 (373)
T 1q8y_A 160 PENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234 (373)
T ss_dssp GGGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred hHHeEEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 9999994 4458999999999876332 2345789999999999999999999999999999999999999
Q ss_pred CCCCCccch------HHHHHHHhhccC-----------------------------CchhhhccCCCCcccHHHHHHHHH
Q 002085 854 NYGDEHTSL------AEWAWRHYAEEK-----------------------------PITDALDKGIAEPCYLEEMTTVYR 898 (969)
Q Consensus 854 ~~~~~~~~~------~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 898 (969)
|.+...... ...+........ +..+.... ....+...+..+.+
T Consensus 235 f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 312 (373)
T 1q8y_A 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE--KYKFSKDEAKEISD 312 (373)
T ss_dssp C---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHH--TTCCCHHHHHHHHH
T ss_pred CCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhh--cccCCcchHHHHHH
Confidence 976542211 111111110000 00000000 01234566788999
Q ss_pred HHHHccCCCCCCCCCHHHHHH--HHhhcC
Q 002085 899 LALICTSTLPSSRPSMKEVLQ--ILRRCC 925 (969)
Q Consensus 899 l~~~cl~~dP~~RPs~~evl~--~L~~~~ 925 (969)
++.+||+.||++|||++|+++ .+.+..
T Consensus 313 li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 313 FLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp HHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred HHHHHhccCccccCCHHHHhhChhhhccc
Confidence 999999999999999999997 444443
No 278
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=352.88 Aligned_cols=319 Identities=23% Similarity=0.204 Sum_probs=225.4
Q ss_pred CEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccC
Q 002085 124 QNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYN 203 (969)
Q Consensus 124 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 203 (969)
+.++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 46777777777 5666553 46778888888887766777777777777777777777766777777777777776666
Q ss_pred CCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCC
Q 002085 204 SNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEI 283 (969)
Q Consensus 204 ~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 283 (969)
+ +.+..+..|.++++|++|+|++|++++..|..+..+++|++|+|++|.+++..
T Consensus 91 ~--------------------------l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 144 (477)
T 2id5_A 91 R--------------------------LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 144 (477)
T ss_dssp C--------------------------CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEEC
T ss_pred c--------------------------CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeC
Confidence 3 44444456778888888888888888777777777888888877777777655
Q ss_pred CCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEc
Q 002085 284 PSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQL 362 (969)
Q Consensus 284 ~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L 362 (969)
+..+..+ +|+.|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 145 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~----------------------------------- 189 (477)
T 2id5_A 145 HRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN----------------------------------- 189 (477)
T ss_dssp TTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC-----------------------------------
T ss_pred hhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc-----------------------------------
Confidence 5555443 4555555555555444444555555555555555544
Q ss_pred ccccccCCCCcccccccCCCccccCCCccccccCcccc--ccccEEEeeccccCCCcccccCCcccchhhcccCCccccc
Q 002085 363 YSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA--WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGE 440 (969)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 440 (969)
+..+..+..+++|+.|++++|.+.+.++.... .+|+.|+|++|++++..+..+..+++|+.|++++|.+++.
T Consensus 190 ------~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 190 ------AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263 (477)
T ss_dssp ------EECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE
T ss_pred ------EeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc
Confidence 33334444444444444444444433333221 3677888888888866667788888888888888888877
Q ss_pred cCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccccc
Q 002085 441 IPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 512 (969)
Q Consensus 441 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 512 (969)
.+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+.
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 777888888888888888888887788888888888888888888876667788888888888888888753
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=328.58 Aligned_cols=254 Identities=23% Similarity=0.369 Sum_probs=184.2
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEEE
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 714 (969)
.++|+..+.||+|+||.||+|++..+|+.||||++..... .....+.+.++..+++.++||||+++++++.+++..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 5688999999999999999999998999999999965432 223334555566678888999999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcc-cCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHH-DCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
|||+ ++.+..+..... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||
T Consensus 103 ~e~~-~~~~~~l~~~~~------------~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl 166 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQ------------GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKL 166 (318)
T ss_dssp ECCC-SEEHHHHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEE
T ss_pred Eecc-CCcHHHHHHHhc------------cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEE
Confidence 9999 556665554322 348899999999999999999997 5 8999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcc-----cCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAY-----TTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
+|||+++..... .......||+.|+|||++. +..++.++|||||||++|||++|+.||...... ......
T Consensus 167 ~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~ 241 (318)
T 2dyl_A 167 CDFGISGRLVDD---KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FEVLTK 241 (318)
T ss_dssp CCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHHHH
T ss_pred EECCCchhccCC---ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HHHHHH
Confidence 999999765332 2223456899999999984 556889999999999999999999999753321 111111
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
......+. . +.....+..+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~~~-------~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 242 VLQEEPPL-------L--PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHSCCCC-------C--CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HhccCCCC-------C--CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11111110 0 111122367889999999999999999999986
No 280
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.8e-36 Score=324.49 Aligned_cols=237 Identities=13% Similarity=0.026 Sum_probs=190.8
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
+..+|++.+.||+|+||.||+|.+..+++.||||++......+....+.+.+|++++++++||||+++++++.+++..|+
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 34679999999999999999999998899999999976655556667889999999999999999999999999999999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||++|++|.+++... ....++.+++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 109 v~e~~~g~~L~~~l~~~---------------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl 170 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS---------------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVL 170 (286)
T ss_dssp EEECCCEEEHHHHHTTC---------------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEE
T ss_pred EEEecCCCCHHHHHhcC---------------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEE
Confidence 99999999999998532 23456788999999999999998 9999999999999999999999
Q ss_pred eecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhcc
Q 002085 794 ADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEE 873 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 873 (969)
+++| |++ .++.++|||||||++|||++|+.||.+.........+.......
T Consensus 171 ~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 221 (286)
T 3uqc_A 171 AYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQ 221 (286)
T ss_dssp CSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSC
T ss_pred Eecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccC
Confidence 8443 333 36889999999999999999999998754422110000000000
Q ss_pred CCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002085 874 KPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 926 (969)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 926 (969)
..... ......+..+.+++.+||+.||++| |+.|+++.|+++..
T Consensus 222 ~~~~~--------~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 222 PIEPA--------DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp BCCHH--------HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCChh--------hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00000 0111234678999999999999999 99999999999864
No 281
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-35 Score=340.47 Aligned_cols=257 Identities=23% Similarity=0.325 Sum_probs=187.6
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 714 (969)
+.|...++||+|+||+||.+.. .+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+++..|+|
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv 87 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 87 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence 3455568899999999986544 478999999985432 24678899999886 899999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC------
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE------ 788 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~------ 788 (969)
|||++ |+|.+++........ ......+..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~------~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~ 157 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDE------NLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTAD 157 (434)
T ss_dssp ECCCS-EEHHHHHHTC------------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSC
T ss_pred EecCC-CCHHHHHhccCCCch------hhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccc
Confidence 99996 699999986543110 001124456788999999999999998 99999999999999754
Q ss_pred -------CcEEEeecccceecccCCCCc--cccccccCcccCchhhccc-------CCCCCccchhhHHHHHHHHHh-CC
Q 002085 789 -------FKAKIADFGLAKMLAKQGEPH--TMSAVAGSFGYFAPEYAYT-------TKVNEKIDIYSFGVVLLELVT-GK 851 (969)
Q Consensus 789 -------~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~ellt-g~ 851 (969)
+.+||+|||+++.+....... ......||+.|+|||++.+ ..++.++||||+||++|||++ |.
T Consensus 158 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~ 237 (434)
T 2rio_A 158 QQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237 (434)
T ss_dssp CTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSC
T ss_pred cccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCC
Confidence 489999999998775432211 2234579999999999876 578999999999999999999 88
Q ss_pred CCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 852 EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 852 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
.||....... ..+.... ... ...........+..+.+++.+||+.||++||++.|+++
T Consensus 238 ~Pf~~~~~~~--~~i~~~~---~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 238 HPFGDKYSRE--SNIIRGI---FSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp CTTCSTTTHH--HHHHHTC---CCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCchhhH--HHHhcCC---CCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 8886543221 1111111 000 01111223456678999999999999999999999985
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.1e-36 Score=353.40 Aligned_cols=272 Identities=24% Similarity=0.310 Sum_probs=205.1
Q ss_pred hccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEc------
Q 002085 634 ILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISS------ 707 (969)
Q Consensus 634 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 707 (969)
...+|++.++||+|+||.||+|.+..+|+.||||++.... .....+.+.+|++++++++||||+++++++..
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 4578999999999999999999998899999999986532 34556789999999999999999999998765
Q ss_pred CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECC
Q 002085 708 ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDS 787 (969)
Q Consensus 708 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~ 787 (969)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~----------~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~ 156 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFEN----------CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQP 156 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSC----------TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhccc----------CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeec
Confidence 6778999999999999999986542 13488899999999999999999998 9999999999999997
Q ss_pred CCc---EEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHH
Q 002085 788 EFK---AKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAE 864 (969)
Q Consensus 788 ~~~---~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 864 (969)
++. +||+|||+++..... .......||+.|+|||.+.+..++.++||||+||++|||++|..||.+.... ..
T Consensus 157 ~g~~~~vKL~DFG~a~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--~~ 231 (676)
T 3qa8_A 157 GPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP--VQ 231 (676)
T ss_dssp CSSSCEEEECSCCCCCBTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH--HH
T ss_pred CCCceeEEEcccccccccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch--hh
Confidence 765 999999999876432 2234567999999999999999999999999999999999999999764211 00
Q ss_pred HHH-------HHhhccCCchhhh--ccC--CCCcccHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHhhcC
Q 002085 865 WAW-------RHYAEEKPITDAL--DKG--IAEPCYLEEMTTVYRLALICTSTLPSSRPSMKE-----VLQILRRCC 925 (969)
Q Consensus 865 ~~~-------~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~e-----vl~~L~~~~ 925 (969)
|.. ............. ... .........+..+.+++.+||..||++|||++| +.+.++.+.
T Consensus 232 ~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 232 WHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp SSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000 0000000000000 000 111223445688999999999999999999987 344554443
No 283
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=336.87 Aligned_cols=248 Identities=25% Similarity=0.325 Sum_probs=184.1
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEEEE
Q 002085 637 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 637 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 715 (969)
+|...++||+|+||+||.. ...+++.||||++..... ..+.+|+++++.+ +||||+++++++.+....|+||
T Consensus 25 ~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 5788899999999996643 334789999999854322 2356799999999 7999999999999999999999
Q ss_pred eeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC-----Cc
Q 002085 716 EYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE-----FK 790 (969)
Q Consensus 716 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~ 790 (969)
||++ |+|.+++..... ...+..++.++.|++.||+|||+. +|+||||||+||+++.+ ..
T Consensus 98 E~~~-g~L~~~l~~~~~------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~ 161 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDF------------AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIK 161 (432)
T ss_dssp ECCS-EEHHHHHHSSSC------------CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCC
T ss_pred ECCC-CCHHHHHHhcCC------------CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCcee
Confidence 9996 699999986542 244556789999999999999998 99999999999999532 36
Q ss_pred EEEeecccceecccCCCC-ccccccccCcccCchhhcc---cCCCCCccchhhHHHHHHHHHh-CCCCCCCCCccchHHH
Q 002085 791 AKIADFGLAKMLAKQGEP-HTMSAVAGSFGYFAPEYAY---TTKVNEKIDIYSFGVVLLELVT-GKEANYGDEHTSLAEW 865 (969)
Q Consensus 791 ~kl~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~ 865 (969)
+||+|||+++........ .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... ...
T Consensus 162 ~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-~~~ 240 (432)
T 3p23_A 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-ANI 240 (432)
T ss_dssp EEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-HHH
T ss_pred EEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-HHH
Confidence 889999999876433211 2334567999999999987 4567889999999999999999 777774432211 111
Q ss_pred HHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 866 AWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
....... . ...........+.+++.+||+.||++||++.|+++
T Consensus 241 ----~~~~~~~-~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 241 ----LLGACSL-D------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ----HTTCCCC-T------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HhccCCc-c------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111100 0 00112234466889999999999999999999984
No 284
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.7e-35 Score=317.20 Aligned_cols=238 Identities=22% Similarity=0.310 Sum_probs=185.3
Q ss_pred cchhhhccCCCcc-ceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHH-hccccCceeeEEEEEE
Q 002085 629 FTESNILSSLTES-NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEIL-GTIRHANIVKLWCCIS 706 (969)
Q Consensus 629 ~~~~~~~~~~~~~-~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~ 706 (969)
.....+.++|... +.||+|+||.||+|.+..+++.||+|++... ..+.+|++++ +..+||||+++++++.
T Consensus 10 ~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~ 81 (299)
T 3m2w_A 10 IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYE 81 (299)
T ss_dssp CBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred CcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhh
Confidence 3445677888887 7899999999999999989999999998542 4567888888 5558999999999987
Q ss_pred c----CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCc
Q 002085 707 S----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSN 782 (969)
Q Consensus 707 ~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 782 (969)
. ....++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~N 147 (299)
T 3m2w_A 82 NLYAGRKCLLIVMECLDGGELFSRIQDRGD-----------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPEN 147 (299)
T ss_dssp EEETTEEEEEEEECCCCSCBHHHHHHHCTT-----------CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred hhcCCCceEEEEEeecCCCcHHHHHHhccC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence 6 6778999999999999999987542 3488999999999999999999998 99999999999
Q ss_pred EEECC---CCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCc
Q 002085 783 ILLDS---EFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEH 859 (969)
Q Consensus 783 ill~~---~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~ 859 (969)
|+++. ++.+||+|||++.... +..++.++||||+||++|||++|+.||.+...
T Consensus 148 il~~~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 203 (299)
T 3m2w_A 148 LLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 203 (299)
T ss_dssp EEESSSSTTCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred EEEecCCCCCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 99998 7889999999987542 13467789999999999999999999976533
Q ss_pred cchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002085 860 TSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVLQ 919 (969)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 919 (969)
..... ...............+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 204 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 204 LAISP-------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ----C-------CSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhH-------HHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 21100 000000000000000011223478999999999999999999999997
No 285
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-35 Score=334.88 Aligned_cols=248 Identities=16% Similarity=0.133 Sum_probs=182.8
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcccc-Cc-----------------
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH-AN----------------- 697 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~n----------------- 697 (969)
..|...++||+|+||.||+|++..+|+.||||++...........+.+.+|+.+++.++| +|
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 457778999999999999999999999999999874443333445789999999999976 21
Q ss_pred ----eeeEEEEEEc-----CCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhccc
Q 002085 698 ----IVKLWCCISS-----ENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD 768 (969)
Q Consensus 698 ----iv~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~ 768 (969)
...+..++.. ....+++|+++ +++|.+++....... .....++|..++.++.|++.||+|||+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~------~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 230 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS------STHKSLVHHARLQLTLQVIRLLASLHHY 230 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHT------TTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhccc------ccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111111111 22456777766 689999985321100 0123578899999999999999999988
Q ss_pred CCCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhc----------ccCCCCCccchh
Q 002085 769 CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYA----------YTTKVNEKIDIY 838 (969)
Q Consensus 769 ~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvw 838 (969)
+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||
T Consensus 231 ---~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw 301 (413)
T 3dzo_A 231 ---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW 301 (413)
T ss_dssp ---TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred ---CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence 9999999999999999999999999999865322 344567 999999998 555688899999
Q ss_pred hHHHHHHHHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002085 839 SFGVVLLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPSMKEVL 918 (969)
Q Consensus 839 slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl 918 (969)
||||++|||++|+.||......... ...+.... ..+..+.+++.+||+.||++||++.|++
T Consensus 302 SlGvil~elltg~~Pf~~~~~~~~~-------------~~~~~~~~------~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 302 TLGLAIYWIWCADLPNTDDAALGGS-------------EWIFRSCK------NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHHHHHHHSSCCCCTTGGGSCS-------------GGGGSSCC------CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHHHHHHHCCCCCCCcchhhhH-------------HHHHhhcc------cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999999999999765432211 11111111 1226789999999999999999977764
No 286
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-34 Score=349.50 Aligned_cols=240 Identities=23% Similarity=0.304 Sum_probs=194.0
Q ss_pred ccCCCccceeeecCcEEEEEEEEcC-CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCc---
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDING-AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCISSENS--- 710 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 710 (969)
.++|++.++||+|+||.||+|.+.. +++.||||++.... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 4689999999999999999999975 68999999885432 34455788999999999999999999999987665
Q ss_pred --eEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCC
Q 002085 711 --KLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSE 788 (969)
Q Consensus 711 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~ 788 (969)
.|+||||++|++|.+++.. .++|..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~ 218 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ---------------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE 218 (681)
T ss_dssp EEEEEEEECCCCEECC----C---------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS
T ss_pred ceeEEEEEeCCCCcHHHHHhC---------------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC
Confidence 6999999999999887653 388999999999999999999998 99999999999999986
Q ss_pred CcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002085 789 FKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEANYGDEHTSLAEWAWR 868 (969)
Q Consensus 789 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 868 (969)
.+||+|||+++..... ....||+.|+|||++.+. ++.++|||||||++|||++|..|+.+......
T Consensus 219 -~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------ 284 (681)
T 2pzi_A 219 -QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL------ 284 (681)
T ss_dssp -CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC------
T ss_pred -cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc------
Confidence 8999999999876332 345799999999998765 48899999999999999999888764211100
Q ss_pred HhhccCCchhhhccCCCCcccHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhh
Q 002085 869 HYAEEKPITDALDKGIAEPCYLEEMTTVYRLALICTSTLPSSRPS-MKEVLQILRR 923 (969)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-~~evl~~L~~ 923 (969)
. ...........+.+++.+||+.||++||+ +.++.+.|..
T Consensus 285 --------~-------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 --------P-------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp --------C-------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred --------c-------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00111223467889999999999999995 5556555544
No 287
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.4e-34 Score=317.43 Aligned_cols=262 Identities=17% Similarity=0.245 Sum_probs=183.7
Q ss_pred CCHHHHHHHHHHHHHcCCCC--CCCCC----CCCCCCCCCCcceee----------CCCeEEEEecCCCCCCCCCccccC
Q 002085 32 PNTEERTILLNLKQQLGNPP--SLQSW----TSTSSPCDWPEITCT----------FNSVTGISLRHKDITQKIPPIICD 95 (969)
Q Consensus 32 ~~~~~~~all~~k~~~~~~~--~l~sw----~~~~~~c~w~gv~C~----------~~~v~~l~l~~~~l~~~~~~~~~~ 95 (969)
...+|++||++||+++..++ ++++| ....++|.|.|+.|. ..+|+.|+|+++++. .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 45679999999999985443 36788 456789999999995 257888888888887 67777888
Q ss_pred CCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccC--------
Q 002085 96 LKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGR-------- 167 (969)
Q Consensus 96 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-------- 167 (969)
+++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..|+++++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 888888888888888 77888888888888888888887 77878888888888888887777777776654
Q ss_pred -cccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchh
Q 002085 168 -LSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLE 246 (969)
Q Consensus 168 -l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 246 (969)
+++|++|+|++|+++ .+|..++++++|++|+|++|.+. .+|..++.+++|++|+|++|++.+.+|..|+++++|+
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~---~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS---ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC---CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC---cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 777777777777776 66666777777777777777532 3455566666666666666666666666666666666
Q ss_pred hhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCc
Q 002085 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMN 300 (969)
Q Consensus 247 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N 300 (969)
+|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+ +++.+++..|
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 66666666665666555555555555555555554444444433 2444444333
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.2e-33 Score=312.26 Aligned_cols=307 Identities=23% Similarity=0.358 Sum_probs=155.6
Q ss_pred cCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcc
Q 002085 117 LYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLE 196 (969)
Q Consensus 117 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 196 (969)
+..+++|++|++++|.+. .+| .+..+++|++|+|++|++++ +|. +.++++|++|+|++|++++ +| .+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 456788888888888887 344 37788888888888888874 333 7788888888888888774 33 577777777
Q ss_pred eeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccC
Q 002085 197 VLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYD 276 (969)
Q Consensus 197 ~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 276 (969)
+|++++|.+.. ++. +..+++|+.|++++|.....++. +..+++|++|++++|.+++..+ +..+++
T Consensus 114 ~L~l~~n~i~~---~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~-------- 178 (347)
T 4fmz_A 114 ELYLNEDNISD---ISP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTD-------- 178 (347)
T ss_dssp EEECTTSCCCC---CGG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTT--------
T ss_pred EEECcCCcccC---chh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCC--------
Confidence 77777775321 222 44444444444444433333222 3444444444444444432211 222222
Q ss_pred cccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCcc
Q 002085 277 NILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRT 356 (969)
Q Consensus 277 N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~ 356 (969)
|+.|++++|.+++.. . +..+++|+.|++++|.+.+. +. +..+++
T Consensus 179 ---------------L~~L~l~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~------------------~~-~~~~~~ 222 (347)
T 4fmz_A 179 ---------------LYSLSLNYNQIEDIS-P-LASLTSLHYFTAYVNQITDI------------------TP-VANMTR 222 (347)
T ss_dssp ---------------CSEEECTTSCCCCCG-G-GGGCTTCCEEECCSSCCCCC------------------GG-GGGCTT
T ss_pred ---------------CCEEEccCCcccccc-c-ccCCCccceeecccCCCCCC------------------ch-hhcCCc
Confidence 333333333333211 1 44444455555555544421 00 233444
Q ss_pred CcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCc
Q 002085 357 LRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNL 436 (969)
Q Consensus 357 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 436 (969)
|+.|++++|++++..+ +..+ ++|++|++++|.+++. ..+..+++|++|++++|.
T Consensus 223 L~~L~l~~n~l~~~~~--~~~l----------------------~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~ 276 (347)
T 4fmz_A 223 LNSLKIGNNKITDLSP--LANL----------------------SQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQ 276 (347)
T ss_dssp CCEEECCSSCCCCCGG--GTTC----------------------TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred CCEEEccCCccCCCcc--hhcC----------------------CCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCc
Confidence 4444444444442111 2222 3344444444444432 234444555555555555
Q ss_pred cccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccc
Q 002085 437 FSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 437 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
+++. ..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..| +..+++|+.||+++|+|+
T Consensus 277 l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 277 ISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 5432 234455555555555555555555555555555555555555554333 555555555555555543
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.1e-33 Score=310.65 Aligned_cols=308 Identities=21% Similarity=0.307 Sum_probs=242.9
Q ss_pred cccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccc
Q 002085 92 IICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSEL 171 (969)
Q Consensus 92 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 171 (969)
.+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++. |. +..+++|++|+|++|.++. +| .+.++++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 45678999999999999984 45 489999999999999999954 44 9999999999999999985 44 69999999
Q ss_pred cceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhcc
Q 002085 172 QTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALN 251 (969)
Q Consensus 172 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 251 (969)
++|+|++|++++. +. +..+++|++|++++|.. .. .+..+..+++|+.|++++|.+.+..+ +..+++|++|+++
T Consensus 113 ~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~--~~-~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~ 185 (347)
T 4fmz_A 113 RELYLNEDNISDI-SP-LANLTKMYSLNLGANHN--LS-DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLN 185 (347)
T ss_dssp SEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTT--CC-CCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECT
T ss_pred CEEECcCCcccCc-hh-hccCCceeEEECCCCCC--cc-cccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEcc
Confidence 9999999999955 43 89999999999999952 22 34459999999999999999876655 8899999999999
Q ss_pred CCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCC
Q 002085 252 GNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVP 331 (969)
Q Consensus 252 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 331 (969)
+|++++. +. +..+++|+.|++++|.++ +..+ +..+++|+.|++++|++++
T Consensus 186 ~n~l~~~-~~-~~~l~~L~~L~l~~n~l~-----------------------~~~~--~~~~~~L~~L~l~~n~l~~--- 235 (347)
T 4fmz_A 186 YNQIEDI-SP-LASLTSLHYFTAYVNQIT-----------------------DITP--VANMTRLNSLKIGNNKITD--- 235 (347)
T ss_dssp TSCCCCC-GG-GGGCTTCCEEECCSSCCC-----------------------CCGG--GGGCTTCCEEECCSSCCCC---
T ss_pred CCccccc-cc-ccCCCccceeecccCCCC-----------------------CCch--hhcCCcCCEEEccCCccCC---
Confidence 9999854 33 666666666666666554 2222 6778999999999999983
Q ss_pred cccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeecc
Q 002085 332 ASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNN 411 (969)
Q Consensus 332 ~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N 411 (969)
++. +..+++|++|++++|++++. ..+..+++|+.|++++|++
T Consensus 236 ---------------~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l-------------------- 277 (347)
T 4fmz_A 236 ---------------LSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQI-------------------- 277 (347)
T ss_dssp ---------------CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC--------------------
T ss_pred ---------------Ccc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCcc--------------------
Confidence 222 67889999999999999853 3455555555555555544
Q ss_pred ccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCcccc
Q 002085 412 RFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELS 486 (969)
Q Consensus 412 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 486 (969)
++. ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++..| +..+++|+.|++++|.|+
T Consensus 278 --~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 278 --SDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp --CCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred --CCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 433 246667778888888888887777888888888888888888886555 778888888888888875
No 290
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.2e-33 Score=315.13 Aligned_cols=286 Identities=18% Similarity=0.151 Sum_probs=228.3
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.++++++.+....+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 56889999999988755566899999999999999999888889999999999999999999888889999999999999
Q ss_pred CCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccc
Q 002085 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLI 232 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~ 232 (969)
++|+++...+..|+++++|++|+|++|++++..|..|+++++|++|++++|++... .++.+++|+.|++++|.+.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-----DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-----CGGGCTTCSEEECCSSCCS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-----ccccccccceeeccccccc
Confidence 99999954445579999999999999999988888999999999999999974432 3677888999999888776
Q ss_pred ccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCcccc
Q 002085 233 GEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFG 311 (969)
Q Consensus 233 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~ 311 (969)
+ +...++|+.|++++|+++.. |.. ..++|+.|++++|++++. + .+... +|+.|++++|.+++..|..|.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT-A-WLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc-H-HHcCCCCccEEECCCCcCCCcChhHcc
Confidence 4 33446788888888888743 332 246788888888888753 2 33333 688888888888777777777
Q ss_pred CcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCcc
Q 002085 312 KLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTI 391 (969)
Q Consensus 312 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (969)
.+++|+.|++++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+
T Consensus 270 ~l~~L~~L~L~~n~l~------------------~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 270 KMQRLERLYISNNRLV------------------ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp TCSSCCEEECCSSCCC------------------EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred ccccCCEEECCCCcCc------------------ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcc
Confidence 7888888888887776 23444556777777777777777 5666666666666666666666
Q ss_pred c
Q 002085 392 S 392 (969)
Q Consensus 392 ~ 392 (969)
+
T Consensus 331 ~ 331 (390)
T 3o6n_A 331 V 331 (390)
T ss_dssp C
T ss_pred c
Confidence 5
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.2e-33 Score=331.54 Aligned_cols=309 Identities=17% Similarity=0.151 Sum_probs=238.3
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEec
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDL 152 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 152 (969)
.+++.++++++.+....+..+..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 35788999999988766667899999999999999999888889999999999999999999988889999999999999
Q ss_pred CCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccc
Q 002085 153 GGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLI 232 (969)
Q Consensus 153 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~ 232 (969)
++|.|++..+..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+.. + .++.+++|+.|++++|.+.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~--~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH---V--DLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB---C--CGGGCTTCSEEECCSSCCS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC---c--ChhhhhhhhhhhcccCccc
Confidence 9999996666667999999999999999999999999999999999999997433 2 3677888888888888776
Q ss_pred ccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCcccc
Q 002085 233 GEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFG 311 (969)
Q Consensus 233 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~ 311 (969)
+ +...++|+.|++++|.++.. +..+ .++|+.|+|++|.+++. ..+..+ +|+.|+|++|.+++.+|..|+
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----ccCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 5 34456788888888888743 3222 25777888888877752 333333 677777777777777777777
Q ss_pred CcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCcc
Q 002085 312 KLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTI 391 (969)
Q Consensus 312 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (969)
.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.|
T Consensus 276 ~l~~L~~L~Ls~N~l~~------------------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l 336 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 336 (597)
T ss_dssp TCSSCCEEECTTSCCCE------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred CccCCCEEECCCCCCCC------------------CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCC
Confidence 77777777777777762 3444556677777777777777 5666666666666666666655
Q ss_pred ccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccc
Q 002085 392 SGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGE 440 (969)
Q Consensus 392 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 440 (969)
+ +.. +..+++|+.|++++|.+++.
T Consensus 337 ~----------------------~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 337 V----------------------TLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp C----------------------CCC---CCTTCCCSEEECCSSCEEHH
T ss_pred C----------------------CcC---hhhcCCCCEEEeeCCCCCCh
Confidence 4 221 44455666666666666643
No 292
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=4.9e-34 Score=317.22 Aligned_cols=245 Identities=16% Similarity=0.108 Sum_probs=185.3
Q ss_pred ccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh-----cHHHHHHHHHHHHHHhccc---------cCceee
Q 002085 635 LSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-----NQKLEKEFIAEIEILGTIR---------HANIVK 700 (969)
Q Consensus 635 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~---------h~niv~ 700 (969)
.++|+..+.||+|+||+||+|++ +|+.||||++...... .....+.+.+|+++++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 6899999999754321 2223367888888888885 888888
Q ss_pred EEEEEE------------------------------cCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHH
Q 002085 701 LWCCIS------------------------------SENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPT 750 (969)
Q Consensus 701 l~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~ 750 (969)
+.+.+. +.+..|+||||+++|++.+.+.. ..+++..
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--------------~~~~~~~ 162 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--------------KLSSLAT 162 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--------------TCCCHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--------------cCCCHHH
Confidence 877642 26789999999999977766643 2378999
Q ss_pred HHHHHHHHHHhhhhhc-ccCCCCeEecCCCCCcEEECCCC--------------------cEEEeecccceecccCCCCc
Q 002085 751 RLQIAIGAAQGLCYMH-HDCTPQIIHRDVKSSNILLDSEF--------------------KAKIADFGLAKMLAKQGEPH 809 (969)
Q Consensus 751 ~~~i~~~ia~~L~~LH-~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~ 809 (969)
+..++.|++.||+||| +. +|+||||||+|||++.++ .+||+|||+|+....
T Consensus 163 ~~~i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~----- 234 (336)
T 2vuw_A 163 AKSILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD----- 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----
T ss_pred HHHHHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----
Confidence 9999999999999999 88 999999999999999887 899999999987642
Q ss_pred cccccccCcccCchhhcccCCCCCccchhhHHHH-HHHHHhCCCCCCCCCccchHHHHHHHhhccCCchhhhccCCCCcc
Q 002085 810 TMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVV-LLELVTGKEANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPC 888 (969)
Q Consensus 810 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (969)
....||+.|+|||++.+.. +.++||||+|++ .+++++|..||.... .............. .......+.
T Consensus 235 --~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~ 304 (336)
T 2vuw_A 235 --GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL---WLHYLTDKMLKQMT----FKTKCNTPA 304 (336)
T ss_dssp --TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH---HHHHHHHHHHHTCC----CSSCCCSHH
T ss_pred --CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh---hhhHHHHhhhhhhc----cCcccchhh
Confidence 1347999999999998766 889999998777 777888888873210 00001111110000 001111223
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002085 889 YLEEMTTVYRLALICTSTLPSSRPSMKEVL 918 (969)
Q Consensus 889 ~~~~~~~~~~l~~~cl~~dP~~RPs~~evl 918 (969)
....+.++.+++.+||+.| |++|++
T Consensus 305 ~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 305 MKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 4456788999999999876 888887
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=8.7e-32 Score=298.46 Aligned_cols=294 Identities=20% Similarity=0.229 Sum_probs=222.6
Q ss_pred eEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCC
Q 002085 75 VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154 (969)
Q Consensus 75 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 154 (969)
++.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 345666666665 4666553 6899999999999977788899999999999999999988889999999999999999
Q ss_pred CCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccccc
Q 002085 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE 234 (969)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 234 (969)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+...+..|..+..+ +|+.|++++|++.+
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 9998 6777665 78999999999999777778999999999999999765445667777777 88888888888765
Q ss_pred CchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCc
Q 002085 235 IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKL 313 (969)
Q Consensus 235 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 313 (969)
+|..+. ++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+... +|+.|++++|+++ .+|..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 554443 678888888888887777778888888888888888887777666655 6888888888887 667777888
Q ss_pred ccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEccccccc--CCCCcccccccCCCccccCCCc
Q 002085 314 KNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS--GELPTGLWTTFNLSSLMLSDNT 390 (969)
Q Consensus 314 ~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 390 (969)
++|+.|++++|++++..+..+.. ..+ ......|+.|++++|++. +..|..+..+++|+.+++++|+
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~---------~~~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCP---------VGF--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSC---------SSC--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccCCEEECCCCCCCccChhHccc---------ccc--ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 88888888888877433222110 000 011456777888888776 5566667777777777777663
No 294
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=4.5e-33 Score=305.44 Aligned_cols=249 Identities=28% Similarity=0.432 Sum_probs=189.4
Q ss_pred CcccEEEccCCCCCC--CCCcccCCCCCCCEEeccC-CcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccc
Q 002085 97 KNLTTIDLSSNSIPG--EFPEFLYNCTKLQNLDLSQ-NYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQT 173 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (969)
.++++|+|++|+++| .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|+++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 479999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred eecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccC-CCcEEEccCCcccccCchhhcCCCchhhhhccC
Q 002085 174 LYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLK-KLKTLWMTEANLIGEIPEAMSNLSSLEILALNG 252 (969)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 252 (969)
|+|++|++++.+|..|+.+++|++|++++|++ .+.+|..++.++ +|+.|++++|++.+.+|..|..++ |++|+|++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l--~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~ 206 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRI--SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCC--EEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcc--cCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC
Confidence 99999999999999999999999999999862 235677777776 777777777777777777777776 77777777
Q ss_pred CcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCc
Q 002085 253 NHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPA 332 (969)
Q Consensus 253 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 332 (969)
|++++..|..+..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------~~~l~~L~~L~Ls~N~l~~~--- 259 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK------------------------VGLSKNLNGLDLRNNRIYGT--- 259 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG------------------------CCCCTTCCEEECCSSCCEEC---
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc------------------------ccccCCCCEEECcCCcccCc---
Confidence 777777777777777777777777766654443 33444555555555544432
Q ss_pred ccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCc
Q 002085 333 SIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNT 390 (969)
Q Consensus 333 ~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 390 (969)
+|..+..+++|+.|+|++|+++|.+|.. ..+++|+.|++++|.
T Consensus 260 --------------~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 260 --------------LPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp --------------CCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred --------------CChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 2223344555555555555555555554 555566666666665
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.5e-31 Score=292.47 Aligned_cols=295 Identities=22% Similarity=0.262 Sum_probs=226.1
Q ss_pred eEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCC
Q 002085 75 VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154 (969)
Q Consensus 75 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 154 (969)
++.++++++.+. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 345566666665 3555443 6899999999999988788899999999999999999988899999999999999999
Q ss_pred CCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccccc
Q 002085 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE 234 (969)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 234 (969)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+...+..+..+..+++|+.|++++|++..
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~- 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-
Confidence 9999 6777665 79999999999999888888999999999999999865555677788888999999998888765
Q ss_pred CchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCc
Q 002085 235 IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKL 313 (969)
Q Consensus 235 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 313 (969)
+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+... +|+.|+|++|+++ .+|..+..+
T Consensus 186 l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 186 IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 454443 688888888888887777888888888888888888887777666655 6888888888888 667777888
Q ss_pred ccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccC--CCCcccccccCCCccccCCCc
Q 002085 314 KNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG--ELPTGLWTTFNLSSLMLSDNT 390 (969)
Q Consensus 314 ~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 390 (969)
++|++|++++|++++..+..+.. +........|+.|++++|++.. ..|..+..+.+++.++|++|+
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~-----------~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCP-----------PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSC-----------SSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCEEECCCCcCCccChhhcCC-----------cccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 88888888888887433222210 0011224567777888887752 445666666677777776663
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=3.8e-31 Score=293.31 Aligned_cols=294 Identities=22% Similarity=0.211 Sum_probs=169.0
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecc
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (969)
+++.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5777788877776 5666553 577777777777776666677777777777777777776667777777777777777
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccc--ccCchhhcCCCchhhhhccCCcC
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLI--GEIPEAMSNLSSLEILALNGNHL 255 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l 255 (969)
+|+++ .+|..+. ++|++|++++|++. ...+..|..+++|+.|++++|.+. +..|..+..+
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l------------- 172 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIR--KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL------------- 172 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCC--CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-------------
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccC--ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-------------
Confidence 77777 4554443 56666666666422 222233445555555555555443 2333444444
Q ss_pred CCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccc
Q 002085 256 EGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIG 335 (969)
Q Consensus 256 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 335 (969)
+|++|++++|++++ +|..+. .+|+.|++++|.+++..+..|..+++|+.|++++|++++.
T Consensus 173 ------------~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~------ 232 (332)
T 2ft3_A 173 ------------KLNYLRISEAKLTG-IPKDLP-ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI------ 232 (332)
T ss_dssp ------------CCSCCBCCSSBCSS-CCSSSC-SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC------
T ss_pred ------------ccCEEECcCCCCCc-cCcccc-CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC------
Confidence 44455555554443 222221 2466666666666665556666667777777777766642
Q ss_pred cccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCC
Q 002085 336 VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSG 415 (969)
Q Consensus 336 ~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~ 415 (969)
.+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+.....
T Consensus 233 -----------~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~-------------- 286 (332)
T 2ft3_A 233 -----------ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP-------------- 286 (332)
T ss_dssp -----------CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSC--------------
T ss_pred -----------ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccc--------------
Confidence 1224555666777777777776 66666666666666666666665332221100
Q ss_pred CcccccCCcccchhhcccCCccc--cccCccccCccccchhhccCcc
Q 002085 416 QIQRGVGSWKNLIVFKASNNLFS--GEIPVELTSLSHLNTLLLDGNK 460 (969)
Q Consensus 416 ~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 460 (969)
..+ -.....|+.|++++|.+. +..|..|..+++|+.|+|++|+
T Consensus 287 ~~~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 287 VGF--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSC--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccc--ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 000 001234455555555544 3455566666666666666664
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.2e-30 Score=288.98 Aligned_cols=295 Identities=21% Similarity=0.241 Sum_probs=181.0
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecc
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (969)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 6788999998887 5676554 678888998888887777788888888888888888887778888888888888888
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCC
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEG 257 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 257 (969)
+|+++ .+|..+. ++|++|++++|. +.+..+..|.++++|++|++++|+++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~--------------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENE--------------------------ITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSC--------------------------CCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred CCcCC-ccChhhc--ccccEEECCCCc--------------------------ccccCHhHhcCCccccEEECCCCcCCc
Confidence 88887 4555443 566666666664 444444445555555555555555532
Q ss_pred --CCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccc
Q 002085 258 --AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIG 335 (969)
Q Consensus 258 --~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 335 (969)
..+..+..+++|++|++++|.++. +|..+. .+|+.|++++|++++..|..|..+++|+.|++++|++++.
T Consensus 160 ~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~------ 231 (330)
T 1xku_A 160 SGIENGAFQGMKKLSYIRIADTNITT-IPQGLP-PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV------ 231 (330)
T ss_dssp GGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC-TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE------
T ss_pred cCcChhhccCCCCcCEEECCCCcccc-CCcccc-ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee------
Confidence 344445555555555555555553 222221 3566666666666666666666777777777777766632
Q ss_pred cccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCC
Q 002085 336 VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSG 415 (969)
Q Consensus 336 ~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~ 415 (969)
.+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+.....
T Consensus 232 -----------~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~-------------- 285 (330)
T 1xku_A 232 -----------DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP-------------- 285 (330)
T ss_dssp -----------CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC--------------
T ss_pred -----------ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCC--------------
Confidence 2234556667777777777776 66666666666666666666665332221110
Q ss_pred CcccccCCcccchhhcccCCcccc--ccCccccCccccchhhccCcc
Q 002085 416 QIQRGVGSWKNLIVFKASNNLFSG--EIPVELTSLSHLNTLLLDGNK 460 (969)
Q Consensus 416 ~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 460 (969)
. ........|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 286 ~--~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 286 P--GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp S--SCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred c--ccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 0 000112334444455554432 445566666777777777664
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.9e-35 Score=342.50 Aligned_cols=383 Identities=19% Similarity=0.147 Sum_probs=217.5
Q ss_pred CCcccEEEccCCCCCCCCCcc-cCCCCCCCEEeccCCcCCC----CCCCCcccCCCCcEEecCCCCCCCcCCCcc-cCcc
Q 002085 96 LKNLTTIDLSSNSIPGEFPEF-LYNCTKLQNLDLSQNYFVG----PIPSDIDRISGLQCIDLGGNNFSGDIPRSI-GRLS 169 (969)
Q Consensus 96 l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~ 169 (969)
+++|++|||++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 356888999999887544333 7778889999999888874 345667777888888888888875444333 2344
Q ss_pred ----cccceecccccccC----cCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhc-
Q 002085 170 ----ELQTLYLYMNEFNG----TFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMS- 240 (969)
Q Consensus 170 ----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~- 240 (969)
+|++|+|++|+++. .++..+..+++|++|++++|. +.+..+..+.
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~--------------------------i~~~~~~~l~~ 135 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL--------------------------LGDAGLQLLCE 135 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB--------------------------CHHHHHHHHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCc--------------------------CchHHHHHHHH
Confidence 58888888888773 446677777777777777764 2222222111
Q ss_pred ----CCCchhhhhccCCcCCCCC----CchhhcCcccchhhccCcccccCCCCchhh------cccccccccCcccccc-
Q 002085 241 ----NLSSLEILALNGNHLEGAI----PSGLFLLNNLTQLFLYDNILSGEIPSSVEA------LKLTDIDLSMNNLTGS- 305 (969)
Q Consensus 241 ----~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~------~~L~~L~Ls~N~l~~~- 305 (969)
..++|++|+|++|++++.. +..+..+++|++|++++|.++...+..+.. .+|+.|++++|.+++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 1234455555555444322 233334455555555555554332222211 1466666666666542
Q ss_pred ---CCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCC----CCcccccc
Q 002085 306 ---IPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE----LPTGLWTT 378 (969)
Q Consensus 306 ---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l 378 (969)
++..+..+++|++|++++|.+++.....+ .+..+..+++|++|++++|++++. ++..+..+
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l------------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 283 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAEL------------CPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK 283 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHH------------HHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHH------------HHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC
Confidence 35556666777777777777653211100 011123467788888888877743 56666667
Q ss_pred cCCCccccCCCccccccCccc-------cccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCcccc
Q 002085 379 FNLSSLMLSDNTISGELPSKT-------AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHL 451 (969)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~~~~~-------~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 451 (969)
++|+.|+|++|.+++..+... .++|++|+|++|.+++.... .++..+..+++|
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~~~L 343 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCS--------------------HFSSVLAQNRFL 343 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--------------------HHHHHHHHCSSC
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHH--------------------HHHHHHhhCCCc
Confidence 777777777777764322211 13566666666655543111 133444455555
Q ss_pred chhhccCcccCCCCCccccc-----ccCCCEEEccCccccC----CCCcccccccccceEeccCccccccCCCccc----
Q 002085 452 NTLLLDGNKLSGKLPSQIVS-----WTSLNNLNLARNELSG----EIPKAIGSLLVMVSLDLSGNQFSGEIPPEIG---- 518 (969)
Q Consensus 452 ~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~---- 518 (969)
+.|+|++|++++..+..+.. .++|+.|+|++|++++ .+|..+..+++|++|||++|++++.....+.
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~ 423 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVR 423 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHT
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhc
Confidence 66666666555433333322 4566666666666664 5566666666666666666666643111111
Q ss_pred c-c-cccEEEeecCcCCCCC
Q 002085 519 Q-L-KLNTFNLSSNKLYGNI 536 (969)
Q Consensus 519 ~-l-~L~~l~ls~N~l~~~~ 536 (969)
. . +|+.|++.+|......
T Consensus 424 ~~~~~L~~L~~~~~~~~~~~ 443 (461)
T 1z7x_W 424 QPGCLLEQLVLYDIYWSEEM 443 (461)
T ss_dssp STTCCCCEEECTTCCCCHHH
T ss_pred cCCcchhheeecccccCHHH
Confidence 1 1 3556666665554433
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4.8e-34 Score=332.27 Aligned_cols=386 Identities=18% Similarity=0.130 Sum_probs=254.5
Q ss_pred CeEEEEecCCCCCCCCCcc-ccCCCcccEEEccCCCCCC----CCCcccCCCCCCCEEeccCCcCCCCCCCCc-ccCC--
Q 002085 74 SVTGISLRHKDITQKIPPI-ICDLKNLTTIDLSSNSIPG----EFPEFLYNCTKLQNLDLSQNYFVGPIPSDI-DRIS-- 145 (969)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~-- 145 (969)
+++.|++++++++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+ ..+.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 5789999999987655443 7889999999999999985 457788899999999999999986444444 3355
Q ss_pred --CCcEEecCCCCCCC----cCCCcccCcccccceecccccccCcCCccc-----CCCCCcceeecccCCCCCCC--CCC
Q 002085 146 --GLQCIDLGGNNFSG----DIPRSIGRLSELQTLYLYMNEFNGTFPKEI-----GDLSNLEVLGLAYNSNFKPA--MIP 212 (969)
Q Consensus 146 --~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~~~~~~--~~p 212 (969)
+|++|+|++|+++. .+|..+..+++|++|+|++|++++..+..+ ...++|++|++++|.+.... .++
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 79999999999984 568889999999999999999986555433 23668999999999644322 245
Q ss_pred ccccccCCCcEEEccCCcccccCchhhc-----CCCchhhhhccCCcCCCC----CCchhhcCcccchhhccCcccccCC
Q 002085 213 IEFGMLKKLKTLWMTEANLIGEIPEAMS-----NLSSLEILALNGNHLEGA----IPSGLFLLNNLTQLFLYDNILSGEI 283 (969)
Q Consensus 213 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~ 283 (969)
..+..+++|++|++++|.+....+..+. .+++|++|+|++|.+++. ++..+..+++|++|+|++|+++...
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 5677788888888888887766555443 356888888888888763 4666667788888888888776432
Q ss_pred CCchh------hcccccccccCcccccc----CCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCC
Q 002085 284 PSSVE------ALKLTDIDLSMNNLTGS----IPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGN 353 (969)
Q Consensus 284 ~~~~~------~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~ 353 (969)
...+. ..+|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..+.... ...
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l------------~~~ 311 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETL------------LEP 311 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHH------------TST
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHh------------ccC
Confidence 11111 12566666666666643 344555566666666666665432221111000 011
Q ss_pred CccCcEEEcccccccCC----CCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCC-----c
Q 002085 354 CRTLRTVQLYSNRFSGE----LPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGS-----W 424 (969)
Q Consensus 354 l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~-----l 424 (969)
.++|+.|++++|.+++. ++..+..+++|+.|+|++| ++++..+..+.. .
T Consensus 312 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n----------------------~i~~~~~~~l~~~l~~~~ 369 (461)
T 1z7x_W 312 GCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNN----------------------RLEDAGVRELCQGLGQPG 369 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSS----------------------BCHHHHHHHHHHHHTSTT
T ss_pred CccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCC----------------------ccccccHHHHHHHHcCCC
Confidence 23556666666665533 2333444445555555554 444333332221 4
Q ss_pred ccchhhcccCCcccc----ccCccccCccccchhhccCcccCCCCCcccc-----cccCCCEEEccCccccCCCCccc
Q 002085 425 KNLIVFKASNNLFSG----EIPVELTSLSHLNTLLLDGNKLSGKLPSQIV-----SWTSLNNLNLARNELSGEIPKAI 493 (969)
Q Consensus 425 ~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~p~~~ 493 (969)
++|++|++++|.+++ .+|..+..+++|++|+|++|++++.....+. ...+|+.|++.+|.+....++.+
T Consensus 370 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~l 447 (461)
T 1z7x_W 370 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 447 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred CceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHHH
Confidence 567777777777765 5677777788888888888887743221111 23467788887777765444433
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=7.7e-34 Score=341.60 Aligned_cols=433 Identities=15% Similarity=0.107 Sum_probs=304.8
Q ss_pred CCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCC---CCCCCcccC------------CCCCCCEEe
Q 002085 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSI---PGEFPEFLY------------NCTKLQNLD 127 (969)
Q Consensus 63 c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L~~L~ 127 (969)
++|.++.+.... .+.+.++ ....++..+..+++|++|+|+++.. .+.+|..++ .+++|++|+
T Consensus 42 k~W~~~~~~~~~--~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~ 118 (592)
T 3ogk_B 42 RRWFKIDSETRE--HVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVH 118 (592)
T ss_dssp HHHHHHHHHHCC--EEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHhhhcccc--EEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEE
Confidence 378888654332 2333322 2223345567889999999988532 134444444 789999999
Q ss_pred ccCCcCCCCCCCCcccC--CCCcEEecCCCC-CCC-cCCCcccCcccccceecccccccCc----CCcccCCCCCcceee
Q 002085 128 LSQNYFVGPIPSDIDRI--SGLQCIDLGGNN-FSG-DIPRSIGRLSELQTLYLYMNEFNGT----FPKEIGDLSNLEVLG 199 (969)
Q Consensus 128 Ls~N~l~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ 199 (969)
|++|.+++..+..+... .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 119 L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~ 198 (592)
T 3ogk_B 119 FRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLN 198 (592)
T ss_dssp EESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEE
T ss_pred eeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEE
Confidence 99999887666667664 459999999986 221 1222334789999999999998866 344556789999999
Q ss_pred cccCCCCC--CCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCC---CCCCchhhcCcccchhhc
Q 002085 200 LAYNSNFK--PAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLE---GAIPSGLFLLNNLTQLFL 274 (969)
Q Consensus 200 L~~N~~~~--~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~L 274 (969)
+++|.+.. ...++..+.++++|++|++++|.+.+ +|..+.++++|++|+++.+... +..+..+..+++|+.|++
T Consensus 199 L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l 277 (592)
T 3ogk_B 199 FYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGL 277 (592)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEE
T ss_pred eeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCc
Confidence 99997541 13455567789999999999988776 7788999999999999864433 234456677888999998
Q ss_pred cCcccccCCCCchhhc-ccccccccCccccccCC-ccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCC
Q 002085 275 YDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIP-EEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLG 352 (969)
Q Consensus 275 ~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~ 352 (969)
+++.. +.+|..+... +|++|+|++|.+++... ..+..+++|+.|+++ |.+... .++....
T Consensus 278 ~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~----------------~l~~~~~ 339 (592)
T 3ogk_B 278 SYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDR----------------GLEVLAQ 339 (592)
T ss_dssp TTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHH----------------HHHHHHH
T ss_pred cccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHH----------------HHHHHHH
Confidence 88643 3556655544 79999999999765443 346788999999998 444321 2222334
Q ss_pred CCccCcEEEcc-----------cccccCC-CCcccccccCCCccccCCCccccccCccc---cccccEEEee----cccc
Q 002085 353 NCRTLRTVQLY-----------SNRFSGE-LPTGLWTTFNLSSLMLSDNTISGELPSKT---AWNLTRLEIS----NNRF 413 (969)
Q Consensus 353 ~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~~L~~L~Ls----~N~l 413 (969)
.+++|++|+++ .|.+++. ++.....+++|++|+++.|++++..+... .++|+.|+|+ .|.+
T Consensus 340 ~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l 419 (592)
T 3ogk_B 340 YCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERI 419 (592)
T ss_dssp HCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCC
T ss_pred hCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccc
Confidence 67889999999 3666643 22334457899999998888887555432 4679999996 6778
Q ss_pred CCC-----cccccCCcccchhhcccCC--ccccccCcccc-CccccchhhccCcccCC-CCCcccccccCCCEEEccCcc
Q 002085 414 SGQ-----IQRGVGSWKNLIVFKASNN--LFSGEIPVELT-SLSHLNTLLLDGNKLSG-KLPSQIVSWTSLNNLNLARNE 484 (969)
Q Consensus 414 ~~~-----~~~~~~~l~~L~~L~l~~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 484 (969)
++. ++..+.++++|+.|++++| .+++..+..+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|.
T Consensus 420 ~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 420 TDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp SSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred cCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 764 3444667888999999743 36666555554 37889999999999875 345556778899999999999
Q ss_pred ccCC-CCcccccccccceEeccCccccccCCCcc
Q 002085 485 LSGE-IPKAIGSLLVMVSLDLSGNQFSGEIPPEI 517 (969)
Q Consensus 485 l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~ 517 (969)
+++. ++..+..+++|+.|+|++|++++.....+
T Consensus 500 l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l 533 (592)
T 3ogk_B 500 FSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLM 533 (592)
T ss_dssp CBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGG
T ss_pred CcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHH
Confidence 8754 34445678899999999999886533333
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=8.3e-31 Score=293.22 Aligned_cols=294 Identities=20% Similarity=0.192 Sum_probs=204.3
Q ss_pred CCCCCCCCCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCC
Q 002085 55 SWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFV 134 (969)
Q Consensus 55 sw~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 134 (969)
.|.....+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 22 ~~~~~~~~C~~~~~-c~--------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CK--------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp -----CCEECTTSE-EE--------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CCCccCCCCCCCeE-ee--------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC
Confidence 35555678999987 64 4556665 3565544 58999999999999776778999999999999999999
Q ss_pred CCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCC-cccCCCCCcceeecccCCCCCCCCCCc
Q 002085 135 GPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFP-KEIGDLSNLEVLGLAYNSNFKPAMIPI 213 (969)
Q Consensus 135 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~~~~~~~~p~ 213 (969)
+..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++|.. .....+.
T Consensus 90 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~-~~~~~~~ 168 (353)
T 2z80_A 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT-FTKIQRK 168 (353)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS-CCEECTT
T ss_pred ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcc-ccccCHH
Confidence 8888889999999999999999996555558999999999999999995444 4789999999999999841 2233456
Q ss_pred cccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCch-hhcCcccchhhccCcccccCCCCchhhccc
Q 002085 214 EFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSG-LFLLNNLTQLFLYDNILSGEIPSSVEALKL 292 (969)
Q Consensus 214 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L 292 (969)
.|+.+++|++|++++|++.+..|..|.++++|++|++++|+++. +|.. +..+++|++|++++|.+++..+..+...
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~-- 245 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTG-- 245 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT-HHHHHHHHTTTEEEEEEESCBCTTCCCC-------
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc-chhhhhhhcccccEEECCCCccccccccccccc--
Confidence 77888888888888888888878888888888888888888864 3443 3357788888888887776544433211
Q ss_pred ccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCC
Q 002085 293 TDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELP 372 (969)
Q Consensus 293 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 372 (969)
.....++.+++++|.+++. -...+|..+.++++|+.|++++|+++ .+|
T Consensus 246 ------------------~~~~~l~~l~L~~~~l~~~-------------~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~ 293 (353)
T 2z80_A 246 ------------------ETNSLIKKFTFRNVKITDE-------------SLFQVMKLLNQISGLLELEFSRNQLK-SVP 293 (353)
T ss_dssp -------------------CCCCCCEEEEESCBCCHH-------------HHHHHHHHHHTCTTCCEEECCSSCCC-CCC
T ss_pred ------------------cccchhhccccccccccCc-------------chhhhHHHHhcccCCCEEECCCCCCC-ccC
Confidence 1123333444444444321 00123444555666666666666666 444
Q ss_pred cc-cccccCCCccccCCCccccccC
Q 002085 373 TG-LWTTFNLSSLMLSDNTISGELP 396 (969)
Q Consensus 373 ~~-~~~l~~L~~L~Ls~N~l~~~~~ 396 (969)
.. +..+++|++|+|++|.+.+..|
T Consensus 294 ~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 294 DGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHHHhcCCCCCEEEeeCCCccCcCC
Confidence 44 3566666666666666665443
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.1e-30 Score=281.54 Aligned_cols=251 Identities=22% Similarity=0.255 Sum_probs=186.8
Q ss_pred CCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCC--CCC
Q 002085 62 PCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGP--IPS 139 (969)
Q Consensus 62 ~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~ 139 (969)
.|.|.+|.|+...++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++.. .|.
T Consensus 6 ~C~~~~l~c~~~~l~-----------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 72 (306)
T 2z66_A 6 SCSGTEIRCNSKGLT-----------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72 (306)
T ss_dssp EEETTEEECCSSCCS-----------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEH
T ss_pred eeCCCEEEcCCCCcc-----------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccc
Confidence 378888888654433 2344332 5899999999999955555689999999999999998832 366
Q ss_pred CcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCC-cccCCCCCcceeecccCCCCCCCCCCcccccc
Q 002085 140 DIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFP-KEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218 (969)
Q Consensus 140 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l 218 (969)
.+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+ ....+..+..+
T Consensus 73 ~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l--~~~~~~~~~~l 149 (306)
T 2z66_A 73 SDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT--RVAFNGIFNGL 149 (306)
T ss_dssp HHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCC--EECSTTTTTTC
T ss_pred ccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcC--CccchhhcccC
Confidence 7778999999999999998 677789999999999999999986655 5788899999999998863 34456667778
Q ss_pred CCCcEEEccCCcccc-cCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-cccccc
Q 002085 219 KKLKTLWMTEANLIG-EIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDID 296 (969)
Q Consensus 219 ~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~ 296 (969)
++|++|++++|.+.+ .+|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+... +|+.|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 888888888887776 567777778888888888888877667777777777777777777776555455443 566666
Q ss_pred ccCccccccCCccccCcc-cchhhhhccccCcC
Q 002085 297 LSMNNLTGSIPEEFGKLK-NLQLLGLFSNHLSG 328 (969)
Q Consensus 297 Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 328 (969)
+++|++++..|..+..++ +|++|++++|.+++
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 666666666666665553 56666666666554
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.1e-28 Score=262.66 Aligned_cols=261 Identities=22% Similarity=0.198 Sum_probs=215.1
Q ss_pred cceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCC
Q 002085 67 EITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISG 146 (969)
Q Consensus 67 gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 146 (969)
++.|.....+.+++++++++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 81 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CceECCCCCeEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccC
Confidence 667876666788888888874 45433 468999999999999877788999999999999999999888999999999
Q ss_pred CcEEecCCCC-CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEE
Q 002085 147 LQCIDLGGNN-FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLW 225 (969)
Q Consensus 147 L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~ 225 (969)
|++|+|++|. ++...|..|..+++|++|+|++|++++..|..|.++++|++|++++|++. ...+..|+.+++|++|+
T Consensus 82 L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ--ALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEE
T ss_pred CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc--ccCHhHhccCCCccEEE
Confidence 9999999997 88666889999999999999999999888899999999999999999743 34455688899999999
Q ss_pred ccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccc
Q 002085 226 MTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTG 304 (969)
Q Consensus 226 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~ 304 (969)
|++|++.+..+..|.++++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+... +|+.|++++|.+..
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 99999888777789999999999999999998888888899999999999999987666666655 68888999988875
Q ss_pred cCCccccCcccchhhhhccccCcCcCCcc
Q 002085 305 SIPEEFGKLKNLQLLGLFSNHLSGEVPAS 333 (969)
Q Consensus 305 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 333 (969)
..+.. .-...++.+..+.+.+.+..|..
T Consensus 240 ~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 240 DCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp SGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred CCCcH-HHHHHHHhcccccCccccCCchH
Confidence 43321 22344666667777776655554
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.6e-30 Score=283.59 Aligned_cols=267 Identities=18% Similarity=0.180 Sum_probs=226.5
Q ss_pred CCCCCCCCCCCCCCcc--eeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCC-CCCCCcccC-------CCCC
Q 002085 53 LQSWTSTSSPCDWPEI--TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSI-PGEFPEFLY-------NCTK 122 (969)
Q Consensus 53 l~sw~~~~~~c~w~gv--~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~ 122 (969)
..+|.....|+.+..+ .|...+++.++++++.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++
T Consensus 21 ~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~ 96 (312)
T 1wwl_A 21 KPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISG 96 (312)
T ss_dssp SCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSC
T ss_pred ccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCC
Confidence 4567766677777654 56666788899999999 788776654 99999999999 456777776 8999
Q ss_pred CCEEeccCCcCCCCCCCCc--ccCCCCcEEecCCCCCCCcCCCcccCc-----ccccceecccccccCcCCcccCCCCCc
Q 002085 123 LQNLDLSQNYFVGPIPSDI--DRISGLQCIDLGGNNFSGDIPRSIGRL-----SELQTLYLYMNEFNGTFPKEIGDLSNL 195 (969)
Q Consensus 123 L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L 195 (969)
|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 9999999999999999987 9999999999999999976 8888888 999999999999999888999999999
Q ss_pred ceeecccCCCCCCCCCCccc--cccCCCcEEEccCCcccc--cCc-hhhcCCCchhhhhccCCcCCCCCC-chhhcCccc
Q 002085 196 EVLGLAYNSNFKPAMIPIEF--GMLKKLKTLWMTEANLIG--EIP-EAMSNLSSLEILALNGNHLEGAIP-SGLFLLNNL 269 (969)
Q Consensus 196 ~~L~L~~N~~~~~~~~p~~~--~~l~~L~~L~L~~n~l~~--~~p-~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L 269 (969)
++|++++|++......|..+ +.+++|++|+|++|++.+ .++ ..+.++++|++|+|++|++++..| ..+..+++|
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 255 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQL 255 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTC
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCC
Confidence 99999999743211134444 899999999999999983 233 456789999999999999998775 455678999
Q ss_pred chhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcC
Q 002085 270 TQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328 (969)
Q Consensus 270 ~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 328 (969)
++|+|++|+|+ .+|..+. .+|+.|+|++|++++. |. +..+++|++|++++|++++
T Consensus 256 ~~L~Ls~N~l~-~ip~~~~-~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 256 NSLNLSFTGLK-QVPKGLP-AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CEEECTTSCCS-SCCSSCC-SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CEEECCCCccC-hhhhhcc-CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 99999999999 6676665 6899999999999976 65 9999999999999999985
No 305
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3e-28 Score=268.63 Aligned_cols=266 Identities=21% Similarity=0.309 Sum_probs=227.0
Q ss_pred CCCCCCC--CCCCCCCCcceeeCCCeEEEEecCCCCCC----CCCccc--cCCCcccEEEccCCCCCCCCCcccCCCCCC
Q 002085 52 SLQSWTS--TSSPCDWPEITCTFNSVTGISLRHKDITQ----KIPPII--CDLKNLTTIDLSSNSIPGEFPEFLYNCTKL 123 (969)
Q Consensus 52 ~l~sw~~--~~~~c~w~gv~C~~~~v~~l~l~~~~l~~----~~~~~~--~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 123 (969)
++.+|.. ..|+|.|.+.-|....- .-..+...| .++..+ ...+++++|+|++|+++ .+|..++++++|
T Consensus 31 aLl~~k~~~~~~~~~~~~~w~~~~~~---~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L 106 (328)
T 4fcg_A 31 VLSQWQRHYNADRNRWHSAWRQANSN---NPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHL 106 (328)
T ss_dssp HHHHHHHHHHHCCTTHHHHHHHHTTT---CTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTC
T ss_pred HHHHHHHhccCCchhhhhhhcccccc---cccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCC
Confidence 3567764 36789998877732100 000011111 011111 24578999999999999 889999999999
Q ss_pred CEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCC---------CCC
Q 002085 124 QNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD---------LSN 194 (969)
Q Consensus 124 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~ 194 (969)
++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|+++++|++|+|++|++.+.+|..++. +++
T Consensus 107 ~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~ 184 (328)
T 4fcg_A 107 QHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVN 184 (328)
T ss_dssp SEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTT
T ss_pred CEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCC
Confidence 99999999999 89999999999999999999999 88999999999999999999999999988765 999
Q ss_pred cceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhc
Q 002085 195 LEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFL 274 (969)
Q Consensus 195 L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 274 (969)
|++|+|++|++. .+|..++.+++|++|+|++|++.+ +|..+..+++|++|+|++|++.+.+|..+..+++|++|+|
T Consensus 185 L~~L~L~~n~l~---~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 185 LQSLRLEWTGIR---SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp CCEEEEEEECCC---CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCEEECcCCCcC---cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 999999999643 788899999999999999999985 6667999999999999999999999999999999999999
Q ss_pred cCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCc
Q 002085 275 YDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327 (969)
Q Consensus 275 ~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 327 (969)
++|++.+.+|..+..+ +|+.|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999888776 7999999999999999999999999999999887765
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.6e-29 Score=278.38 Aligned_cols=276 Identities=20% Similarity=0.187 Sum_probs=212.6
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecc
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (969)
.....++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 3446899999998 6787665 589999999999997777789999999999999999998888899999999999999
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCCc--cccccCCCcEEEccCCc-ccccCchhhcCCCchhhhhccCCc
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPI--EFGMLKKLKTLWMTEAN-LIGEIPEAMSNLSSLEILALNGNH 254 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~--~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~N~ 254 (969)
+|++++..+..|+++++|++|++++|++. .+|. .|..+++|++|++++|+ +.+..+..|.++++|++|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYK---TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCS---SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCc---ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 99999766666999999999999999643 4554 68889999999999885 555556788888888888888888
Q ss_pred CCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcc
Q 002085 255 LEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPAS 333 (969)
Q Consensus 255 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 333 (969)
+++..|..+..+++|++|++++|+++...+..+... +|+.|++++|++++..+..+.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~---------------------- 243 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS---------------------- 243 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-------------------------
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc----------------------
Confidence 888778888888888888888887753222222222 455555555555433222111
Q ss_pred cccccccCcccccCCCCCCCCccCcEEEcccccccC----CCCcccccccCCCccccCCCccccccCcc---ccccccEE
Q 002085 334 IGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG----ELPTGLWTTFNLSSLMLSDNTISGELPSK---TAWNLTRL 406 (969)
Q Consensus 334 ~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~~L~~L 406 (969)
.......++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .+|.. ..++|++|
T Consensus 244 ----------------~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L 306 (353)
T 2z80_A 244 ----------------TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKI 306 (353)
T ss_dssp -------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ----------------cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEE
Confidence 11234567778888887775 47888999999999999999999 45543 34789999
Q ss_pred EeeccccCCCcc
Q 002085 407 EISNNRFSGQIQ 418 (969)
Q Consensus 407 ~Ls~N~l~~~~~ 418 (969)
+|++|.+++..|
T Consensus 307 ~L~~N~~~~~~~ 318 (353)
T 2z80_A 307 WLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCBCCCHH
T ss_pred EeeCCCccCcCC
Confidence 999999997544
No 307
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5e-28 Score=286.90 Aligned_cols=279 Identities=23% Similarity=0.381 Sum_probs=194.4
Q ss_pred CCCCCCCCCCCCCCcc--------eeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCC
Q 002085 53 LQSWTSTSSPCDWPEI--------TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQ 124 (969)
Q Consensus 53 l~sw~~~~~~c~w~gv--------~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 124 (969)
+++|..+.+||.|.|. .|....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|. .+++|+
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCC
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCC
Confidence 4568777889999663 445557899999999998 6777665 79999999999998 5665 578999
Q ss_pred EEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCC
Q 002085 125 NLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 125 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
+|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|+
T Consensus 85 ~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred EEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCc
Confidence 9999999998 5665 67899999999999984 555 56789999999999984 5553 4889999999986
Q ss_pred CCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCC
Q 002085 205 NFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIP 284 (969)
Q Consensus 205 ~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 284 (969)
+.. +|. .+++|+.|++++|++.+ +| ..+++|+.|+|++|++++ +|.. +++|+.|++++|.++. +|
T Consensus 153 l~~---l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~ 217 (622)
T 3g06_A 153 LAS---LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LP 217 (622)
T ss_dssp CSC---CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC
T ss_pred CCC---cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cC
Confidence 443 332 34677788888877765 44 445677777888887774 3432 3667777777777763 33
Q ss_pred CchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEccc
Q 002085 285 SSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYS 364 (969)
Q Consensus 285 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~ 364 (969)
..+ .+|+.|+|++|++++ +| ..+++|+.|++++|+|+ .+|. .+++|+.|+|++
T Consensus 218 ~~~--~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~------------------~lp~---~~~~L~~L~Ls~ 270 (622)
T 3g06_A 218 ALP--SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT------------------SLPM---LPSGLLSLSVYR 270 (622)
T ss_dssp CCC--TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS------------------CCCC---CCTTCCEEECCS
T ss_pred CCC--CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC------------------cCCc---ccccCcEEeCCC
Confidence 321 356667777776664 34 33456666666666665 2222 345566666666
Q ss_pred ccccCCCCcccccccCCCccccCCCcccc
Q 002085 365 NRFSGELPTGLWTTFNLSSLMLSDNTISG 393 (969)
Q Consensus 365 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 393 (969)
|+|+ .+|..+..+++|+.|+|++|.+++
T Consensus 271 N~L~-~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 271 NQLT-RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp SCCC-SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred CCCC-cCCHHHhhccccCEEEecCCCCCC
Confidence 6666 556666655555555555555543
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.6e-27 Score=275.89 Aligned_cols=245 Identities=22% Similarity=0.263 Sum_probs=216.1
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.+++++.+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 34455555543 555443 689999999999998889999999999999999999998888999999999999999999
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCC-ccccccCCCcEEEccCCcccccC
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIP-IEFGMLKKLKTLWMTEANLIGEI 235 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~ 235 (969)
|++..+..|.++++|++|+|++|+++...+..|.++++|++|++++|. ....++ ..|..+++|+.|+|++|++.+.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~--~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELK--KLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT--TCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCC--CccccChhhccCCCCCCEEECCCCccccc-
Confidence 997777789999999999999999998777899999999999999864 333444 4689999999999999998864
Q ss_pred chhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcc
Q 002085 236 PEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLK 314 (969)
Q Consensus 236 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~ 314 (969)
| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+ +|+.|+|++|++++..+..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4 58899999999999999999889999999999999999999999988888876 799999999999988888899999
Q ss_pred cchhhhhccccCcC
Q 002085 315 NLQLLGLFSNHLSG 328 (969)
Q Consensus 315 ~L~~L~L~~N~l~~ 328 (969)
+|+.|+|++|.+..
T Consensus 291 ~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 291 YLVELHLHHNPWNC 304 (452)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEccCCCcCC
Confidence 99999999999874
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.3e-27 Score=256.74 Aligned_cols=250 Identities=24% Similarity=0.199 Sum_probs=219.2
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCc-CCCCCCCCcccCCCCcEEe
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY-FVGPIPSDIDRISGLQCID 151 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~ 151 (969)
.+++.|+++++.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|. +++..|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 468999999999999888899999999999999999998889999999999999999997 8877789999999999999
Q ss_pred cCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcc
Q 002085 152 LGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANL 231 (969)
Q Consensus 152 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l 231 (969)
|++|++++..|..|.++++|++|+|++|++++..+..|+.+++|++|++++|++. ...+..|..+++|+.|++++|.+
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS--SVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--EECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc--ccCHHHhcCccccCEEECCCCcc
Confidence 9999999888899999999999999999999888888999999999999999633 33445699999999999999999
Q ss_pred cccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCcccc
Q 002085 232 IGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFG 311 (969)
Q Consensus 232 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 311 (969)
.+..|..|.++++|+.|+|++|++++..+..+..+++|++|+|++|.+....+.......++.+..+.+.+.+..|..+.
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHhC
Confidence 99999999999999999999999998777789999999999999999987655432223477788889999988888775
Q ss_pred C--cccchhhhhccc
Q 002085 312 K--LKNLQLLGLFSN 324 (969)
Q Consensus 312 ~--l~~L~~L~L~~N 324 (969)
+ +..++..++.++
T Consensus 270 g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 270 GRDLKRLAANDLQGC 284 (285)
T ss_dssp TCBGGGSCGGGSCCC
T ss_pred CcChhhcCHHHhccC
Confidence 5 444555444443
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.9e-27 Score=275.31 Aligned_cols=248 Identities=21% Similarity=0.216 Sum_probs=175.1
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecc
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (969)
....++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4578899998888 6776654 689999999999998888899999999999999999998888899999999999999
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCch-hhcCCCchhhhhccCCcCC
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLE 256 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~ 256 (969)
+|++++..+..|.++++|++|+|++|++. ...+..|..+++|+.|++++|+..+.++. .|.++++|++|+|++|+++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIE--SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCC--EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcc--eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 99999777777888999999999988632 33344677777777777777555554443 5666666777777776666
Q ss_pred CCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCccccc
Q 002085 257 GAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGV 336 (969)
Q Consensus 257 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 336 (969)
+. | .+..+++ |+.|+|++|++++..|..|..+++|+.|++++|++++
T Consensus 210 ~~-~-~~~~l~~-----------------------L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------- 256 (452)
T 3zyi_A 210 DM-P-NLTPLVG-----------------------LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-------- 256 (452)
T ss_dssp SC-C-CCTTCTT-----------------------CCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE--------
T ss_pred cc-c-ccccccc-----------------------ccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce--------
Confidence 32 3 2344444 4445555555555555566666666666666666653
Q ss_pred ccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccc
Q 002085 337 VAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 392 (969)
Q Consensus 337 l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 392 (969)
..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 257 ---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 257 ---------IERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ---------ECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ---------ECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 22344556666667777777666555555555566666655555554
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=274.32 Aligned_cols=246 Identities=24% Similarity=0.275 Sum_probs=216.5
Q ss_pred EEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCC
Q 002085 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155 (969)
Q Consensus 76 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 155 (969)
..++..+.+++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34555666665 3565544 68999999999999888899999999999999999999888889999999999999999
Q ss_pred CCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCC-CccccccCCCcEEEccCCccccc
Q 002085 156 NFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI-PIEFGMLKKLKTLWMTEANLIGE 234 (969)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~-p~~~~~l~~L~~L~L~~n~l~~~ 234 (969)
+|+...+..|..+++|++|+|++|+++...+..|.++++|++|++++|. ....+ +..|.++++|+.|+|++|++..
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~--~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 199 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK--RLSYISEGAFEGLSNLRYLNLAMCNLRE- 199 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT--TCCEECTTTTTTCSSCCEEECTTSCCSS-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC--CcceeCcchhhcccccCeecCCCCcCcc-
Confidence 9997767789999999999999999998888899999999999999864 33334 4469999999999999999874
Q ss_pred CchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCc
Q 002085 235 IPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKL 313 (969)
Q Consensus 235 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l 313 (969)
+| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+ +|+.|+|++|++++..+..|..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 45 48899999999999999998889999999999999999999999888888776 79999999999998888889999
Q ss_pred ccchhhhhccccCcC
Q 002085 314 KNLQLLGLFSNHLSG 328 (969)
Q Consensus 314 ~~L~~L~L~~N~l~~ 328 (969)
++|+.|+|++|.+..
T Consensus 279 ~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 279 HHLERIHLHHNPWNC 293 (440)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEcCCCCccC
Confidence 999999999999874
No 312
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=6e-31 Score=316.38 Aligned_cols=406 Identities=14% Similarity=0.066 Sum_probs=306.1
Q ss_pred CCCcccCCCCCCCEEeccCCcC---CCCCCCCcc------------cCCCCcEEecCCCCCCCcCCCcccCc--ccccce
Q 002085 112 EFPEFLYNCTKLQNLDLSQNYF---VGPIPSDID------------RISGLQCIDLGGNNFSGDIPRSIGRL--SELQTL 174 (969)
Q Consensus 112 ~~p~~~~~l~~L~~L~Ls~N~l---~~~~p~~l~------------~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L 174 (969)
..+..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+..+ .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3455567889999999988642 134554444 78999999999999987777777664 459999
Q ss_pred eccccc-ccC-cCCcccCCCCCcceeecccCCCCCCCC--CCccccccCCCcEEEccCCccc----ccCchhhcCCCchh
Q 002085 175 YLYMNE-FNG-TFPKEIGDLSNLEVLGLAYNSNFKPAM--IPIEFGMLKKLKTLWMTEANLI----GEIPEAMSNLSSLE 246 (969)
Q Consensus 175 ~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~~~~~~~--~p~~~~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~ 246 (969)
+|++|. ++. .++....++++|++|+|++|.+...+. ++..+..+++|++|++++|.+. +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 999987 221 122334578999999999997433221 4445678999999999999987 45566678899999
Q ss_pred hhhccCCcCCCCCCchhhcCcccchhhccCcccc---cCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhc
Q 002085 247 ILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS---GEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLF 322 (969)
Q Consensus 247 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~---~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 322 (969)
.|+|++|.+.+ +|..+..+++|++|+++.+... +..+..+... +|+.|+++++... .+|..+..+++|++|+++
T Consensus 224 ~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls 301 (592)
T 3ogk_B 224 SVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLL 301 (592)
T ss_dssp EEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEET
T ss_pred EEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecC
Confidence 99999999995 6788899999999999864333 1222233333 6899999886544 678888899999999999
Q ss_pred cccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccC-----------CCcc
Q 002085 323 SNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLS-----------DNTI 391 (969)
Q Consensus 323 ~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-----------~N~l 391 (969)
+|.+++.. ++..+.++++|+.|+++++-..+.++..+..+++|+.|+++ .|.+
T Consensus 302 ~~~l~~~~----------------~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~ 365 (592)
T 3ogk_B 302 YALLETED----------------HCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLV 365 (592)
T ss_dssp TCCCCHHH----------------HHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCC
T ss_pred CCcCCHHH----------------HHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCcc
Confidence 99976421 12235678999999999443333445555678999999999 3667
Q ss_pred ccccCc---cccccccEEEeeccccCCCcccccCC-cccchhhccc----CCccccc-----cCccccCccccchhhccC
Q 002085 392 SGELPS---KTAWNLTRLEISNNRFSGQIQRGVGS-WKNLIVFKAS----NNLFSGE-----IPVELTSLSHLNTLLLDG 458 (969)
Q Consensus 392 ~~~~~~---~~~~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~ 458 (969)
++.... ...++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|+|++
T Consensus 366 ~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~ 445 (592)
T 3ogk_B 366 SQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYL 445 (592)
T ss_dssp CHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEEC
T ss_pred CHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEec
Confidence 643222 23478999999999999887777766 8899999996 7888863 445577899999999985
Q ss_pred c--ccCCCCCccccc-ccCCCEEEccCccccC-CCCcccccccccceEeccCccccccC-CCcccccc-ccEEEeecCcC
Q 002085 459 N--KLSGKLPSQIVS-WTSLNNLNLARNELSG-EIPKAIGSLLVMVSLDLSGNQFSGEI-PPEIGQLK-LNTFNLSSNKL 532 (969)
Q Consensus 459 N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~-L~~l~ls~N~l 532 (969)
| .+++..+..+.. +++|+.|+|++|++++ .++..+..+++|+.|+|++|+|++.. +..+..++ |++|+|++|++
T Consensus 446 ~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 446 RQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp CGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred CCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 4 477665555544 8899999999999986 34566688999999999999998654 33445564 99999999998
Q ss_pred CCC
Q 002085 533 YGN 535 (969)
Q Consensus 533 ~~~ 535 (969)
++.
T Consensus 526 t~~ 528 (592)
T 3ogk_B 526 SMT 528 (592)
T ss_dssp CTT
T ss_pred CHH
Confidence 865
No 313
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=5.9e-28 Score=264.37 Aligned_cols=247 Identities=23% Similarity=0.225 Sum_probs=147.3
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCC--cCCCcccCcccccceecc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSG--DIPRSIGRLSELQTLYLY 177 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~ 177 (969)
+.+++++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57889999888 6676553 688999999999885444557888999999999998873 235667778888888888
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCC-ccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCC
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIP-IEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLE 256 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 256 (969)
+|.++ .+|..+..+++|++|++++|++.. ..+ ..+..+++|++|++++|.+.+..|..|.++++|++|+|++|.++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ--MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEES--STTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccc--cccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 88887 466667777777777777775221 111 23445555555555555554444444444445555555554444
Q ss_pred C-CCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccc
Q 002085 257 G-AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIG 335 (969)
Q Consensus 257 ~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 335 (969)
+ .+|..+..+++ |+.|++++|++++..|..|..+++|+.|++++|++++..
T Consensus 164 ~~~~~~~~~~l~~-----------------------L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----- 215 (306)
T 2z66_A 164 ENFLPDIFTELRN-----------------------LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD----- 215 (306)
T ss_dssp GGEECSCCTTCTT-----------------------CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC-----
T ss_pred cccchhHHhhCcC-----------------------CCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC-----
Confidence 3 23333444444 444444444444444445555555555555555554211
Q ss_pred cccccCcccccCCCCCCCCccCcEEEcccccccCCCCccccccc-CCCccccCCCccc
Q 002085 336 VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTIS 392 (969)
Q Consensus 336 ~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 392 (969)
+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++|.++
T Consensus 216 ------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 216 ------------TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp ------------SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred ------------hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 11234455556666666666555555555542 4555555555544
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=6.4e-29 Score=272.49 Aligned_cols=254 Identities=21% Similarity=0.179 Sum_probs=157.4
Q ss_pred hcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccc-cCCCCchh--------hcccccccccCccccccCCcc
Q 002085 239 MSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS-GEIPSSVE--------ALKLTDIDLSMNNLTGSIPEE 309 (969)
Q Consensus 239 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~--------~~~L~~L~Ls~N~l~~~~p~~ 309 (969)
++..++|+.|++++|.+ .+|..+... |+.|+|++|+++ +.+|..+. ..+|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45556777788888887 566666543 777777777773 34444443 235777777777777666665
Q ss_pred c--cCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccC
Q 002085 310 F--GKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLS 387 (969)
Q Consensus 310 ~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 387 (969)
+ ..+++|++|+|++|++++. |..++.+. . ..+++|++|+|++|++++..|..+..+++|+.|+|+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~----------~--~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 181 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQ----------Q--WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLS 181 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHH----------T--TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECC
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHH----------H--hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECC
Confidence 5 6677777777777777643 33222110 0 012667777777777776666666666666666666
Q ss_pred CCccccccCccccccccEEEeeccccCCCcccc--cCCcccchhhcccCCcccc---ccCccccCccccchhhccCcccC
Q 002085 388 DNTISGELPSKTAWNLTRLEISNNRFSGQIQRG--VGSWKNLIVFKASNNLFSG---EIPVELTSLSHLNTLLLDGNKLS 462 (969)
Q Consensus 388 ~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~---~~p~~~~~l~~L~~L~Ls~N~l~ 462 (969)
+|++.+.++ .+.. +..+++|++|++++|+|++ .....+..+++|+.|+|++|+++
T Consensus 182 ~N~l~~~~~--------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 241 (312)
T 1wwl_A 182 DNPELGERG--------------------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLR 241 (312)
T ss_dssp SCTTCHHHH--------------------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCC
T ss_pred CCCcCcchH--------------------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 666554321 1111 2455566666666666652 11233356677777777777777
Q ss_pred CCCC-cccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCC
Q 002085 463 GKLP-SQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYG 534 (969)
Q Consensus 463 ~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~ 534 (969)
+.+| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..++ |++|++++|++++
T Consensus 242 ~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 242 DAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6554 34555677777777777776 6676665 6777777777777754 54 66664 7777777777765
No 315
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.6e-28 Score=289.53 Aligned_cols=189 Identities=18% Similarity=0.096 Sum_probs=134.5
Q ss_pred eeeecCcEEEEEEEEcCCCcEEEEEEEeccch-------hcHHHHHHHHHHHHHHhcc-ccCceeeEEEEEEcCCceEEE
Q 002085 643 LIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-------LNQKLEKEFIAEIEILGTI-RHANIVKLWCCISSENSKLLV 714 (969)
Q Consensus 643 ~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 714 (969)
..+.|+.|.+..++....|+.||||++..... ..+...+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35677777777777666789999999965421 1234457899999999999 799999999999999999999
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEe
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIA 794 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 794 (969)
|||++|++|.+++...+. ++. .+|+.||+.||+|+|++ |||||||||+|||++++|.+||+
T Consensus 321 MEyv~G~~L~d~i~~~~~-------------l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~ 381 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE-------------IDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLI 381 (569)
T ss_dssp EECCCSEEHHHHHHTTCC-------------CCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEEC
T ss_pred EecCCCCcHHHHHHhCCC-------------CCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEe
Confidence 999999999999986543 433 35899999999999999 99999999999999999999999
Q ss_pred ecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCC
Q 002085 795 DFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 853 (969)
Q Consensus 795 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p 853 (969)
|||+|+...... .......||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 382 DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 382 DFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ecccCeeCCCCC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 999998764332 22344679999999999875 567889999999999888766544
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=4.9e-27 Score=278.39 Aligned_cols=266 Identities=27% Similarity=0.385 Sum_probs=140.0
Q ss_pred CcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhh
Q 002085 194 NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLF 273 (969)
Q Consensus 194 ~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 273 (969)
+++.|++++|.+ ..+|..+. ++|+.|+|++|++. .+|. .+++|++|+|++|+|++ +|. .+++|++|+
T Consensus 41 ~l~~L~ls~n~L---~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 41 GNAVLNVGESGL---TTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp CCCEEECCSSCC---SCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCcEEEecCCCc---CccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 577888887753 34555554 67777777777665 3444 45667777777777763 444 456677777
Q ss_pred ccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCC
Q 002085 274 LYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGN 353 (969)
Q Consensus 274 L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~ 353 (969)
|++|++++..+ ...+|+.|++++|++++ +|.. +++|++|++++|++++ +|. .
T Consensus 108 Ls~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~------------------l~~---~ 159 (622)
T 3g06_A 108 IFSNPLTHLPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS------------------LPA---L 159 (622)
T ss_dssp ECSCCCCCCCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC------------------CCC---C
T ss_pred CcCCcCCCCCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC------------------cCC---c
Confidence 77776664322 12256666666666663 3332 2556666666665552 111 1
Q ss_pred CccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhccc
Q 002085 354 CRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKAS 433 (969)
Q Consensus 354 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 433 (969)
+++|+.|++++|++++ +| ..+++|+.|++++|.|++ +|. ...+|+.|++++|.++.
T Consensus 160 ~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~-~~~~L~~L~L~~N~l~~------------------ 215 (622)
T 3g06_A 160 PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT-LPSELYKLWAYNNRLTS------------------ 215 (622)
T ss_dssp CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSS------------------
T ss_pred cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC-ccchhhEEECcCCcccc------------------
Confidence 2345556666666552 33 223455555555555543 221 12344555555554442
Q ss_pred CCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccC
Q 002085 434 NNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEI 513 (969)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~ 513 (969)
+|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+
T Consensus 216 -------l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~l 276 (622)
T 3g06_A 216 -------LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RL 276 (622)
T ss_dssp -------CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SC
T ss_pred -------cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cC
Confidence 2321 2445555555555553 33 23345555555555555 3443 3445555555555555 45
Q ss_pred CCcccccc-ccEEEeecCcCCCCCCcccccc
Q 002085 514 PPEIGQLK-LNTFNLSSNKLYGNIPDEFNNL 543 (969)
Q Consensus 514 p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~ 543 (969)
|..++.++ |+.|+|++|+++|.+|..+..+
T Consensus 277 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 277 PESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 55555553 5555555555555555444433
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=266.46 Aligned_cols=247 Identities=23% Similarity=0.247 Sum_probs=178.0
Q ss_pred ccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceeccc
Q 002085 99 LTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178 (969)
Q Consensus 99 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (969)
...++.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 457899999998 7787665 7899999999999988889999999999999999999988788999999999999999
Q ss_pred ccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCch-hhcCCCchhhhhccCCcCCC
Q 002085 179 NEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPE-AMSNLSSLEILALNGNHLEG 257 (969)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 257 (969)
|+|++..+..|..+++|++|+|++|.+. ...+..|..+++|++|+|++|+..+.++. .|.++++|++|+|++|+++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIE--SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCC--EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CcCCeeCHhHhhccccCceeeCCCCccc--ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 9999777778999999999999999632 33445677777777777777555554443 5677777777777777776
Q ss_pred CCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccc
Q 002085 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVV 337 (969)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 337 (969)
.+| .+..+++| +.|+|++|++++..|..|..+++|+.|+|++|++++
T Consensus 199 ~~~-~~~~l~~L-----------------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--------- 245 (440)
T 3zyj_A 199 EIP-NLTPLIKL-----------------------DELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV--------- 245 (440)
T ss_dssp SCC-CCTTCSSC-----------------------CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE---------
T ss_pred ccc-ccCCCccc-----------------------CEEECCCCccCccChhhhccCccCCEEECCCCceeE---------
Confidence 333 24444444 444555555555555556666666666666666653
Q ss_pred cccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccc
Q 002085 338 AFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS 392 (969)
Q Consensus 338 ~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 392 (969)
..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 246 --------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 246 --------IERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp --------ECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred --------EChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 22334556666666666666666555555555666666666555554
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=5e-26 Score=243.95 Aligned_cols=219 Identities=23% Similarity=0.256 Sum_probs=181.8
Q ss_pred CCCCCCCcceeeC-CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC
Q 002085 60 SSPCDWPEITCTF-NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP 138 (969)
Q Consensus 60 ~~~c~w~gv~C~~-~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 138 (969)
.++|.|.|+.|+- ..++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 5789999999863 457889999999985 666554 689999999999997777789999999999999999996666
Q ss_pred CCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCcccccc
Q 002085 139 SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGML 218 (969)
Q Consensus 139 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l 218 (969)
..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|.+. ...+..|+.+
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~--~~~~~~~~~l 156 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ--SLPKGVFDKL 156 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTC
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC--ccCHhHccCC
Confidence 67799999999999999999777778899999999999999999888888999999999999999633 3334457888
Q ss_pred CCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCC
Q 002085 219 KKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEI 283 (969)
Q Consensus 219 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 283 (969)
++|++|+|++|++.+..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|.+....
T Consensus 157 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 88888888888887777777888888888888888888665666777788888888888776543
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.1e-28 Score=269.01 Aligned_cols=263 Identities=21% Similarity=0.192 Sum_probs=141.5
Q ss_pred EEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCcc
Q 002085 223 TLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNN 301 (969)
Q Consensus 223 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~ 301 (969)
.++++.+++...++..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+ +..+ +|++|++++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 33444444544444455555566666666666665555566666666666666666654433 2222 45555555555
Q ss_pred ccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCC
Q 002085 302 LTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNL 381 (969)
Q Consensus 302 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 381 (969)
+++.. ..++|+.|++++|++++..+ ..+++|++|++++|++++..|..+..+++|
T Consensus 92 l~~l~-----~~~~L~~L~l~~n~l~~~~~--------------------~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L 146 (317)
T 3o53_A 92 VQELL-----VGPSIETLHAANNNISRVSC--------------------SRGQGKKNIYLANNKITMLRDLDEGCRSRV 146 (317)
T ss_dssp EEEEE-----ECTTCCEEECCSSCCSEEEE--------------------CCCSSCEEEECCSSCCCSGGGBCTGGGSSE
T ss_pred ccccc-----CCCCcCEEECCCCccCCcCc--------------------cccCCCCEEECCCCCCCCccchhhhccCCC
Confidence 55322 22566666666666553111 123456666666666665555555555555
Q ss_pred CccccCCCccccccCccccccccEEEeeccccCCCccccc-CCcccchhhcccCCccccccCccccCccccchhhccCcc
Q 002085 382 SSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGV-GSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNK 460 (969)
Q Consensus 382 ~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 460 (969)
+.|+|++|.+++.. +..+ ..+++|++|++++|.|++. + ....+++|+.|+|++|+
T Consensus 147 ~~L~Ls~N~l~~~~----------------------~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~ 202 (317)
T 3o53_A 147 QYLDLKLNEIDTVN----------------------FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNK 202 (317)
T ss_dssp EEEECTTSCCCEEE----------------------GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSC
T ss_pred CEEECCCCCCCccc----------------------HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCc
Confidence 55555555554333 3333 2344445555555554433 1 12235566666666666
Q ss_pred cCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccc-ccCCCcccccc-ccEEEee-cCcCCCCCC
Q 002085 461 LSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS-GEIPPEIGQLK-LNTFNLS-SNKLYGNIP 537 (969)
Q Consensus 461 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~-L~~l~ls-~N~l~~~~p 537 (969)
++ .+|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..++.++ |+.++++ .+.+.|..|
T Consensus 203 l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 203 LA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 66 34444566666666666666665 35556666666666666666666 45555555553 6666666 344555444
Q ss_pred c
Q 002085 538 D 538 (969)
Q Consensus 538 ~ 538 (969)
.
T Consensus 281 ~ 281 (317)
T 3o53_A 281 E 281 (317)
T ss_dssp C
T ss_pred h
Confidence 3
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-28 Score=270.21 Aligned_cols=266 Identities=21% Similarity=0.186 Sum_probs=158.9
Q ss_pred eEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCC
Q 002085 75 VTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154 (969)
Q Consensus 75 v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 154 (969)
....+++.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4444455555544444444455566666666666665555666666666666666666654433 66666666666666
Q ss_pred CCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccccc
Q 002085 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGE 234 (969)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 234 (969)
|++++.. ..++|++|++++|++++..+.. +++|++|++++| ++.+.
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N--------------------------~l~~~ 135 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANN--------------------------KITML 135 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSS--------------------------CCCSG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCC--------------------------CCCCc
Confidence 6665321 2355666666666665433322 344455555444 45555
Q ss_pred CchhhcCCCchhhhhccCCcCCCCCCchhh-cCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCc
Q 002085 235 IPEAMSNLSSLEILALNGNHLEGAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKL 313 (969)
Q Consensus 235 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 313 (969)
.+..+..+++|++|+|++|++++..+..+. .+++|++|+|++|++++. +......+|+.|+|++|++++. |..|..+
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l 213 (317)
T 3o53_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAFM-GPEFQSA 213 (317)
T ss_dssp GGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCEE-CGGGGGG
T ss_pred cchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCCcc-hhhhccc
Confidence 555566666666666666666655555443 456666666666666644 2222233577777777777743 4447777
Q ss_pred ccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEccccccc-CCCCcccccccCCCccccCCC-cc
Q 002085 314 KNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS-GELPTGLWTTFNLSSLMLSDN-TI 391 (969)
Q Consensus 314 ~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N-~l 391 (969)
++|+.|++++|+++ .+|..+..+++|+.|++++|++. +.+|..+..+++|+.|++++| .+
T Consensus 214 ~~L~~L~L~~N~l~------------------~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l 275 (317)
T 3o53_A 214 AGVTWISLRNNKLV------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKL 275 (317)
T ss_dssp TTCSEEECTTSCCC------------------EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcccEEECcCCccc------------------chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhc
Confidence 77888888887776 34556667778888888888887 667777777777777777733 34
Q ss_pred ccccC
Q 002085 392 SGELP 396 (969)
Q Consensus 392 ~~~~~ 396 (969)
+|..+
T Consensus 276 ~~~~~ 280 (317)
T 3o53_A 276 TGQNE 280 (317)
T ss_dssp HSSSS
T ss_pred cCCch
Confidence 44333
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.7e-30 Score=312.57 Aligned_cols=424 Identities=15% Similarity=0.157 Sum_probs=251.0
Q ss_pred CCCCcceeeCCCeEEEEecCCCCCCCCC-ccccCCCcccEEEccCCCCC---CCCCc------------ccCCCCCCCEE
Q 002085 63 CDWPEITCTFNSVTGISLRHKDITQKIP-PIICDLKNLTTIDLSSNSIP---GEFPE------------FLYNCTKLQNL 126 (969)
Q Consensus 63 c~w~gv~C~~~~v~~l~l~~~~l~~~~~-~~~~~l~~L~~L~L~~n~l~---~~~p~------------~~~~l~~L~~L 126 (969)
++|.++.. .....+++..... ..| ..+..+++|++|+|+++... +..|. .+..+++|++|
T Consensus 35 k~W~~~~~--~~~~~l~~~~~~~--~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L 110 (594)
T 2p1m_B 35 KSWYEIER--WCRRKVFIGNCYA--VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEI 110 (594)
T ss_dssp HHHHHHHH--HHCCEEEESSTTS--SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEE
T ss_pred HHHHHhhh--hhceEEeeccccc--cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeE
Confidence 35776622 1233455544322 222 34667888999999987522 11221 13467899999
Q ss_pred eccCCcCCCCCCCCcc-cCCCCcEEecCCC-CCCCc-CCCcccCcccccceecccccccCcCCcccC----CCCCcceee
Q 002085 127 DLSQNYFVGPIPSDID-RISGLQCIDLGGN-NFSGD-IPRSIGRLSELQTLYLYMNEFNGTFPKEIG----DLSNLEVLG 199 (969)
Q Consensus 127 ~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~ 199 (969)
+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+.|+
T Consensus 111 ~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~ 190 (594)
T 2p1m_B 111 RLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLN 190 (594)
T ss_dssp EEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEE
T ss_pred EeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEE
Confidence 9999998876666665 6899999999998 55532 444455889999999999998876555443 667999999
Q ss_pred cccCCCC-CCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCC-------cCCCCCCchhhcCcccch
Q 002085 200 LAYNSNF-KPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGN-------HLEGAIPSGLFLLNNLTQ 271 (969)
Q Consensus 200 L~~N~~~-~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~p~~l~~l~~L~~ 271 (969)
+++|... ....++..+..+++|++|++++|...+.+|..+.++++|++|+++.+ .+.+ ++..+..+++|+.
T Consensus 191 l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~ 269 (594)
T 2p1m_B 191 ISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRC 269 (594)
T ss_dssp CTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCE
T ss_pred ecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCccc
Confidence 9988510 01112222455799999999998555558888889999999985544 3443 3446777888888
Q ss_pred h-hccCcccccCCCCchhh-cccccccccCccccccCC-ccccCcccchhhhhccccCcCcCCcccccccccCcccccCC
Q 002085 272 L-FLYDNILSGEIPSSVEA-LKLTDIDLSMNNLTGSIP-EEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVP 348 (969)
Q Consensus 272 L-~L~~N~l~~~~~~~~~~-~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p 348 (969)
| .+.+... ..++..+.. .+|+.|+|++|.+++... ..+..+++|+.|++++| +... .++
T Consensus 270 Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~----------------~l~ 331 (594)
T 2p1m_B 270 LSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA----------------GLE 331 (594)
T ss_dssp EECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH----------------HHH
T ss_pred ccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH----------------HHH
Confidence 7 4443322 233333333 368888888888764322 23556788888888877 3311 111
Q ss_pred CCCCCCccCcEEEccc---------ccccCCCCcccc-cccCCCccccCCCccccccCccc---cccccEEEee--c---
Q 002085 349 KSLGNCRTLRTVQLYS---------NRFSGELPTGLW-TTFNLSSLMLSDNTISGELPSKT---AWNLTRLEIS--N--- 410 (969)
Q Consensus 349 ~~l~~l~~L~~L~L~~---------N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~---~~~L~~L~Ls--~--- 410 (969)
.....+++|+.|++++ |.+++.....+. .+++|+.|+++.|.+++...... .++|+.|+|+ +
T Consensus 332 ~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~ 411 (594)
T 2p1m_B 332 VLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKA 411 (594)
T ss_dssp HHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTC
T ss_pred HHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCC
Confidence 1122467778887733 444432222222 25667777666666664433321 3467777776 3
Q ss_pred -cccCCCc-----ccccCCcccchhhcccCCccccccCccccC-ccccchhhccCcccCCCCCccc-ccccCCCEEEccC
Q 002085 411 -NRFSGQI-----QRGVGSWKNLIVFKASNNLFSGEIPVELTS-LSHLNTLLLDGNKLSGKLPSQI-VSWTSLNNLNLAR 482 (969)
Q Consensus 411 -N~l~~~~-----~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~ 482 (969)
|.+++.. +..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++
T Consensus 412 ~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~ 490 (594)
T 2p1m_B 412 PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRD 490 (594)
T ss_dssp CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEES
T ss_pred cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcC
Confidence 4444221 11134455566666655 444444444433 5556666666666554333333 4455666666666
Q ss_pred ccccCCCCc-ccccccccceEeccCcccc
Q 002085 483 NELSGEIPK-AIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 483 N~l~~~~p~-~~~~l~~L~~L~ls~N~l~ 510 (969)
|.+++..+. .+..+++|+.|++++|+++
T Consensus 491 n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 491 CPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp CSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred CCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 665433222 2234556666666666554
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=5.5e-27 Score=272.78 Aligned_cols=235 Identities=23% Similarity=0.190 Sum_probs=150.2
Q ss_pred CcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceec
Q 002085 97 KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYL 176 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (969)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++.. ..++|++|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 367777777777776666677777777777777777765544 667777777777777766322 2256666666
Q ss_pred ccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCC
Q 002085 177 YMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLE 256 (969)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 256 (969)
++|.|++..+. .+++|+.|+|++| ++.+..|..|+++++|+.|+|++|.++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N--------------------------~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANN--------------------------KITMLRDLDEGCRSRVQYLDLKLNEID 157 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSS--------------------------CCCSGGGBCGGGGSSEEEEECTTSCCC
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCC--------------------------CCCCCCchhhcCCCCCCEEECCCCCCC
Confidence 66666654432 2344555555554 455555555666666666666666666
Q ss_pred CCCCchhh-cCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccc
Q 002085 257 GAIPSGLF-LLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIG 335 (969)
Q Consensus 257 ~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 335 (969)
+..|..+. .+++|++|+|++|.|++..+ .....+|+.|+|++|.+++.. ..|..+++|+.|+|++|.++
T Consensus 158 ~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~-------- 227 (487)
T 3oja_A 158 TVNFAELAASSDTLEHLNLQYNFIYDVKG-QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-------- 227 (487)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEEEC-CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC--------
T ss_pred CcChHHHhhhCCcccEEecCCCccccccc-cccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCc--------
Confidence 65555554 46666666666666664422 222335677777777777543 34777777888888887776
Q ss_pred cccccCcccccCCCCCCCCccCcEEEccccccc-CCCCcccccccCCCccccC
Q 002085 336 VVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFS-GELPTGLWTTFNLSSLMLS 387 (969)
Q Consensus 336 ~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls 387 (969)
.+|..+..+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 228 ----------~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 228 ----------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ----------EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ----------ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 34555667778888888888876 5666677777777666664
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.6e-25 Score=239.42 Aligned_cols=219 Identities=23% Similarity=0.220 Sum_probs=152.4
Q ss_pred CCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCc
Q 002085 89 IPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRL 168 (969)
Q Consensus 89 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 168 (969)
+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 444442 478999999999987777789999999999999999987777788999999999999999987777888899
Q ss_pred ccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhh
Q 002085 169 SELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEIL 248 (969)
Q Consensus 169 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 248 (969)
++|++|++++|++++..+..++++++|++|++++|.+... .+|..|+.+++|++|++++|++.+..+..|..+++|+.|
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee-cCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 9999999999999877776788888888888888853211 134445555555555555555444444444433333310
Q ss_pred hccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcC
Q 002085 249 ALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328 (969)
Q Consensus 249 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 328 (969)
.+ .|++++|++++..+..+...+|+.|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 179 ~l--------------------~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 179 NL--------------------SLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CE--------------------EEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ce--------------------eeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 00 4556666666555555555566666666666665555556667777777777777765
Q ss_pred cC
Q 002085 329 EV 330 (969)
Q Consensus 329 ~~ 330 (969)
..
T Consensus 239 ~c 240 (276)
T 2z62_A 239 SC 240 (276)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.1e-26 Score=270.11 Aligned_cols=232 Identities=17% Similarity=0.135 Sum_probs=110.7
Q ss_pred CCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccC
Q 002085 220 KLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSM 299 (969)
Q Consensus 220 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~ 299 (969)
+|+.|+|++|++.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.|++..+. .+|+.|++++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~~ 108 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAAN 108 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECCS
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECcC
Confidence 44444444445555555555555555555555555554333 45555555555555555432211 2344444444
Q ss_pred ccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCccccccc
Q 002085 300 NNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF 379 (969)
Q Consensus 300 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 379 (969)
|.+++..+. . +++|+.|+|++|++++..|..+..++
T Consensus 109 N~l~~~~~~---~-----------------------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~ 144 (487)
T 3oja_A 109 NNISRVSCS---R-----------------------------------------GQGKKNIYLANNKITMLRDLDEGCRS 144 (487)
T ss_dssp SCCCCEEEC---C-----------------------------------------CSSCEEEECCSSCCCSGGGBCGGGGS
T ss_pred CcCCCCCcc---c-----------------------------------------cCCCCEEECCCCCCCCCCchhhcCCC
Confidence 444433222 1 23445555555555544444555555
Q ss_pred CCCccccCCCccccccCccc---cccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhc
Q 002085 380 NLSSLMLSDNTISGELPSKT---AWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLL 456 (969)
Q Consensus 380 ~L~~L~Ls~N~l~~~~~~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 456 (969)
+|+.|+|++|.|++..|... .++|+.|+|++|.|++..+ +..+++|+.|+|++|.|++ +|..+..+++|+.|+|
T Consensus 145 ~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~L 221 (487)
T 3oja_A 145 RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221 (487)
T ss_dssp SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEEC
T ss_pred CCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEe
Confidence 55555555555554444332 1345555555555554311 1224444444444444443 2223444555555555
Q ss_pred cCcccCCCCCcccccccCCCEEEccCcccc-CCCCcccccccccceEecc
Q 002085 457 DGNKLSGKLPSQIVSWTSLNNLNLARNELS-GEIPKAIGSLLVMVSLDLS 505 (969)
Q Consensus 457 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls 505 (969)
++|+|+ .+|..+..+++|+.|+|++|.+. +.+|..+..++.|+.|+++
T Consensus 222 s~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 555555 24444444555555555555554 3344444444444444443
No 325
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.3e-24 Score=230.32 Aligned_cols=192 Identities=21% Similarity=0.246 Sum_probs=137.5
Q ss_pred CCCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC
Q 002085 61 SPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSD 140 (969)
Q Consensus 61 ~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 140 (969)
+||.|.|++|.. ..+.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|++..|..
T Consensus 3 ~Cp~~~gC~C~~-~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 78 (251)
T 3m19_A 3 TCETVTGCTCNE-GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78 (251)
T ss_dssp -CHHHHSSEEEG-GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCCCCCceEcCC-CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhH
Confidence 688999999963 34568888888873 555544 57888888888888877888888888888888888888877777
Q ss_pred cccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCC
Q 002085 141 IDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKK 220 (969)
Q Consensus 141 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~ 220 (969)
|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 79 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~---------------- 142 (251)
T 3m19_A 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ---------------- 142 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC----------------
T ss_pred hccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCc----------------
Confidence 8888888888888888887767777888888888888888886666667777777777777775
Q ss_pred CcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccC
Q 002085 221 LKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGE 282 (969)
Q Consensus 221 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 282 (969)
+.+..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++.
T Consensus 143 ----------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 143 ----------LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ----------CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ----------CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 3333333455555555555555555544444455555555555555555543
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=2.6e-24 Score=231.52 Aligned_cols=208 Identities=21% Similarity=0.210 Sum_probs=178.5
Q ss_pred CeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecC
Q 002085 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153 (969)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 153 (969)
+++.|+++++++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58999999999998888899999999999999999998878899999999999999999998888999999999999999
Q ss_pred CCCCCCcCCCcccCcccccceecccccccCc-CCcccCCCCCcceeecccCCCCCCCCCCccccccCCCc----EEEccC
Q 002085 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGT-FPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLK----TLWMTE 228 (969)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~----~L~L~~ 228 (969)
+|++++..+..++++++|++|+|++|++++. +|..|+++++|++|++++|++. ...+..+..+++|+ .|++++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ--SIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC--EECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC--cCCHHHhhhhhhccccceeeecCC
Confidence 9999987777899999999999999999874 6999999999999999999743 34556777777777 888888
Q ss_pred CcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCC
Q 002085 229 ANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIP 284 (969)
Q Consensus 229 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 284 (969)
|.+.+..+..+... +|++|+|++|++++..+..+..+++|+.|+|++|++++..+
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 187 NPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88877666655543 78888888888886655566778888888888887775443
No 327
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=3.8e-28 Score=292.06 Aligned_cols=412 Identities=14% Similarity=0.103 Sum_probs=288.2
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCC---CCCCCC------------cccCCCCcEEecCCCCCCCcCCCc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFV---GPIPSD------------IDRISGLQCIDLGGNNFSGDIPRS 164 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~------------l~~l~~L~~L~L~~N~l~~~~p~~ 164 (969)
+.+++++.... .....+..+++|++|+|+++... +..|.. ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666554322 22234677899999999998632 122222 246789999999999998777777
Q ss_pred cc-Ccccccceecccc-cccCc-CCcccCCCCCcceeecccCCCCCCC--CCCccccccCCCcEEEccCCc--cccc-Cc
Q 002085 165 IG-RLSELQTLYLYMN-EFNGT-FPKEIGDLSNLEVLGLAYNSNFKPA--MIPIEFGMLKKLKTLWMTEAN--LIGE-IP 236 (969)
Q Consensus 165 ~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~~~~~~--~~p~~~~~l~~L~~L~L~~n~--l~~~-~p 236 (969)
+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+...+ .++.....+++|++|++++|. +... ++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 75 7899999999999 55532 4455568999999999999743322 233334577899999999986 2211 22
Q ss_pred hhhcCCCchhhhhccCC-cCCCCCCchhhcCcccchhhccCc-------ccccCCCCchhhc-ccccc-cccCccccccC
Q 002085 237 EAMSNLSSLEILALNGN-HLEGAIPSGLFLLNNLTQLFLYDN-------ILSGEIPSSVEAL-KLTDI-DLSMNNLTGSI 306 (969)
Q Consensus 237 ~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N-------~l~~~~~~~~~~~-~L~~L-~Ls~N~l~~~~ 306 (969)
..+.++++|++|+|++| .+++ +|..+..+++|+.|+++.+ .+.+..+ .+... +|+.| .+.+... +.+
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~-~l~~~~~L~~Ls~~~~~~~-~~l 281 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV-ALSGCKELRCLSGFWDAVP-AYL 281 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH-HHHTCTTCCEEECCBTCCG-GGG
T ss_pred HHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHH-HHhcCCCcccccCCcccch-hhH
Confidence 23456799999999998 4554 7778888999999985544 3443222 33333 57777 4444333 245
Q ss_pred CccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCC-CCcccccccCCCccc
Q 002085 307 PEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE-LPTGLWTTFNLSSLM 385 (969)
Q Consensus 307 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 385 (969)
+..+..+++|+.|++++|.+++.. ++..+.++++|+.|++++| +... ++.....+++|+.|+
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l~~~~----------------l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~ 344 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATVQSYD----------------LVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELR 344 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCCCHHH----------------HHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHhhCCCCEEEccCCCCCHHH----------------HHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEE
Confidence 556667899999999999876321 1222457889999999998 4422 233333578999998
Q ss_pred cC---------CCccccccCcc---ccccccEEEeeccccCCCcccccC-Ccccchhhccc--C----Ccccc-----cc
Q 002085 386 LS---------DNTISGELPSK---TAWNLTRLEISNNRFSGQIQRGVG-SWKNLIVFKAS--N----NLFSG-----EI 441 (969)
Q Consensus 386 Ls---------~N~l~~~~~~~---~~~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~--~----N~l~~-----~~ 441 (969)
++ .+.+++..... ..++|+.|+++.|.+++.....+. .+++|+.|+++ + |.+++ .+
T Consensus 345 L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~ 424 (594)
T 2p1m_B 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGF 424 (594)
T ss_dssp EECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHH
T ss_pred EecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHH
Confidence 83 35555432221 246899999999999877666665 58899999999 4 66662 22
Q ss_pred CccccCccccchhhccCcccCCCCCccccc-ccCCCEEEccCccccCCCCccc-ccccccceEeccCccccccCCCcc-c
Q 002085 442 PVELTSLSHLNTLLLDGNKLSGKLPSQIVS-WTSLNNLNLARNELSGEIPKAI-GSLLVMVSLDLSGNQFSGEIPPEI-G 518 (969)
Q Consensus 442 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~g~~p~~~-~ 518 (969)
+..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+..+ .
T Consensus 425 ~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~ 503 (594)
T 2p1m_B 425 GAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANAS 503 (594)
T ss_dssp HHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGG
T ss_pred HHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHH
Confidence 23367789999999988 777666666665 8899999999999987655555 678999999999999976555433 3
Q ss_pred ccc-ccEEEeecCcCC
Q 002085 519 QLK-LNTFNLSSNKLY 533 (969)
Q Consensus 519 ~l~-L~~l~ls~N~l~ 533 (969)
.++ |++|++++|+++
T Consensus 504 ~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 504 KLETMRSLWMSSCSVS 519 (594)
T ss_dssp GGGGSSEEEEESSCCB
T ss_pred hCCCCCEEeeeCCCCC
Confidence 454 999999999884
No 328
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=6.3e-25 Score=257.40 Aligned_cols=188 Identities=18% Similarity=0.200 Sum_probs=146.1
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh-----cHHHHHHHHHHHHHHhccccCceeeEEEEEEcCCceEE
Q 002085 639 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL-----NQKLEKEFIAEIEILGTIRHANIVKLWCCISSENSKLL 713 (969)
Q Consensus 639 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 713 (969)
...++||+|+||.||+|.. .++.+|+|+....... .....+.+.+|++++++++||||+++..++.+.+..|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 3467899999999999955 5788999986543221 12234668999999999999999966555567778899
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEE
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKI 793 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 793 (969)
||||++|++|.+++.. +..++.|++.||+|||++ +|+||||||+||+++. .+||
T Consensus 417 VmE~~~ggsL~~~l~~---------------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL 470 (540)
T 3en9_A 417 MMSYINGKLAKDVIED---------------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYI 470 (540)
T ss_dssp EEECCCSEEHHHHSTT---------------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEE
T ss_pred EEECCCCCCHHHHHHH---------------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEE
Confidence 9999999999999874 347999999999999988 9999999999999999 9999
Q ss_pred eecccceecccCCCCc-----cccccccCcccCchhhccc--CCCCCccchhhHHHHHHHHHhCCCCC
Q 002085 794 ADFGLAKMLAKQGEPH-----TMSAVAGSFGYFAPEYAYT--TKVNEKIDIYSFGVVLLELVTGKEAN 854 (969)
Q Consensus 794 ~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~elltg~~p~ 854 (969)
+|||+++......... ......||+.|||||++.. ..|+..+|+|+...-..+-+.++.+|
T Consensus 471 ~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 471 IDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 9999999864321111 1235679999999999987 56788899999999998888877665
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.3e-24 Score=233.23 Aligned_cols=187 Identities=19% Similarity=0.191 Sum_probs=138.9
Q ss_pred CCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCcc--ccccccEEEeeccccCCCcccccCCcccch
Q 002085 351 LGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK--TAWNLTRLEISNNRFSGQIQRGVGSWKNLI 428 (969)
Q Consensus 351 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~--~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 428 (969)
+..+++|++|++++|++++ + ..+..+++|++|+|++|.+++..+.. ..++|++|+|++|++++..+..+..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 3445555555555555543 1 24455555555555555555444322 235677777777777777777788888888
Q ss_pred hhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcc
Q 002085 429 VFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQ 508 (969)
Q Consensus 429 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 508 (969)
+|++++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..|+.+++|+.|+|++|+
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 88888888887777778889999999999999987777778889999999999999998777778899999999999999
Q ss_pred ccccCCCccccccccEEEeecCcCCCCCCcccccccc
Q 002085 509 FSGEIPPEIGQLKLNTFNLSSNKLYGNIPDEFNNLAY 545 (969)
Q Consensus 509 l~g~~p~~~~~l~L~~l~ls~N~l~~~~p~~~~~~~~ 545 (969)
+.+..| .++.++++.|+++|.+|..+..+..
T Consensus 217 ~~~~~~------~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 217 WDCTCP------GIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp BCCCTT------TTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred ccccCc------HHHHHHHHHHhCCCcccCcccccCC
Confidence 887655 3677788899999999988776553
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=4.9e-24 Score=228.63 Aligned_cols=182 Identities=22% Similarity=0.229 Sum_probs=95.1
Q ss_pred cCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccc
Q 002085 94 CDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQT 173 (969)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (969)
..+++|+.|++++|.++. ++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..+..|+++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 344555555555555542 22 35555555555555555553 1 24555555555555555555444444555555555
Q ss_pred eecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCC
Q 002085 174 LYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGN 253 (969)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 253 (969)
|+|++|++++..+..|+++++|++|++++|++. ...+..|+.+++|+.|++++|++.+..+..|.++++|++|+|++|
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ--SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccC--ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 555555555554445555555555555555421 222233444444555555555555444445555555555555555
Q ss_pred cCCCCCCchhhcCcccchhhccCccccc
Q 002085 254 HLEGAIPSGLFLLNNLTQLFLYDNILSG 281 (969)
Q Consensus 254 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 281 (969)
++++..+..+..+++|++|+|++|.+.+
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 5555544445555555555555555443
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=2.3e-24 Score=236.01 Aligned_cols=228 Identities=16% Similarity=0.155 Sum_probs=185.9
Q ss_pred CcccEEEccCCCCCCCCCc---ccCCCCCCCEEeccCCcCCCCCCCCc--ccCCCCcEEecCCCCCCCcCC----CcccC
Q 002085 97 KNLTTIDLSSNSIPGEFPE---FLYNCTKLQNLDLSQNYFVGPIPSDI--DRISGLQCIDLGGNNFSGDIP----RSIGR 167 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 167 (969)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578889988877532111 12345779999999999999999988 999999999999999997665 34567
Q ss_pred cccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCC--CccccccCCCcEEEccCCccccc--Cch-hhcCC
Q 002085 168 LSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI--PIEFGMLKKLKTLWMTEANLIGE--IPE-AMSNL 242 (969)
Q Consensus 168 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~--p~~~~~l~~L~~L~L~~n~l~~~--~p~-~~~~l 242 (969)
+++|++|+|++|++++..|..|+.+++|++|+|++|++.....+ +..++.+++|++|+|++|++... .+. .+.++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999988889999999999999999974321112 23357899999999999998632 222 35789
Q ss_pred CchhhhhccCCcCCCCCCchhhcC---cccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhh
Q 002085 243 SSLEILALNGNHLEGAIPSGLFLL---NNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLL 319 (969)
Q Consensus 243 ~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 319 (969)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. .+|+.|+|++|++++. |. +..+++|+.|
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 999999999999998888888776 69999999999999 5566554 5899999999999964 43 7889999999
Q ss_pred hhccccCcC
Q 002085 320 GLFSNHLSG 328 (969)
Q Consensus 320 ~L~~N~l~~ 328 (969)
++++|+++.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999874
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.9e-23 Score=225.82 Aligned_cols=205 Identities=22% Similarity=0.188 Sum_probs=182.5
Q ss_pred cccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCC
Q 002085 309 EFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSD 388 (969)
Q Consensus 309 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 388 (969)
.+.++++++.+++++|.++ .+|..+. ++++.|+|++|++++..|..+..+++|+.|+|++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~------------------~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 64 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT------------------ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64 (290)
T ss_dssp EEECSTTCCEEECTTSCCS------------------SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTT
T ss_pred cccccCCccEEECCCCCCC------------------cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCC
Confidence 3677889999999999998 3444443 6899999999999988889999999999999999
Q ss_pred CccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcc
Q 002085 389 NTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQ 468 (969)
Q Consensus 389 N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 468 (969)
|.|++..+....++|++|+|++|+++ .+|..+..+++|++|++++|+|++..|..|..+++|++|+|++|+|++..+..
T Consensus 65 n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 143 (290)
T 1p9a_G 65 AELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL 143 (290)
T ss_dssp SCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred CccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhh
Confidence 99998766666689999999999999 67788999999999999999999888889999999999999999999777777
Q ss_pred cccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCC
Q 002085 469 IVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGN 535 (969)
Q Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~ 535 (969)
|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.... |+.++|++|++...
T Consensus 144 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 144 LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred cccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 899999999999999999666667899999999999999999 7898888774 99999999999754
No 333
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=9.3e-23 Score=218.48 Aligned_cols=201 Identities=24% Similarity=0.258 Sum_probs=144.2
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecc
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLY 177 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 177 (969)
+++++++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5788999999998 5776654 689999999999997777789999999999999999986656667889999999999
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCC
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEG 257 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 257 (969)
+|++++..+..|.++++|++|++++|++. ...+..|+.+++|++|+|++|++.+..+..|..+++|++|+|++|++++
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK--SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC--eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 99999777777888888888888888632 3344456666677777776666665555556666666666666666665
Q ss_pred CCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCcccc
Q 002085 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLT 303 (969)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~ 303 (969)
..+..|..+++|++|+|++|++++..+..+... +|+.|+|++|.+.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 172 VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 555555566666666666666654444434332 3455555555443
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=5.1e-23 Score=222.45 Aligned_cols=197 Identities=25% Similarity=0.265 Sum_probs=98.9
Q ss_pred CeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecC
Q 002085 74 SVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153 (969)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 153 (969)
.++.+++++++++. +|+.+. +++++|+|++|.|++..+..|.++++|++|+|++|.|++..+ . +.+++|++|+|+
T Consensus 11 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls 85 (290)
T 1p9a_G 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLS 85 (290)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECC
T ss_pred CccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECC
Confidence 45555555555542 333332 455566666666655555555566666666666665553222 1 455556666666
Q ss_pred CCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccc
Q 002085 154 GNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIG 233 (969)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 233 (969)
+|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++. ...+..|..+++|+.|+|++|++.+
T Consensus 86 ~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK--TLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC--CCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC--ccChhhcccccCCCEEECCCCcCCc
Confidence 66555 45555555555666666666555544455555555555555555422 2223334444444444444444443
Q ss_pred cCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCccc
Q 002085 234 EIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNIL 279 (969)
Q Consensus 234 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 279 (969)
..+..|.++++|++|+|++|+++ .+|..++.+.+|+.|+|++|.+
T Consensus 163 l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 33333444444444444444444 3344444444444444444443
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.7e-25 Score=249.06 Aligned_cols=258 Identities=17% Similarity=0.189 Sum_probs=206.5
Q ss_pred EEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCC----cccCCCC-CCCEEeccCCcCCCCCCCCcccC-----CCC
Q 002085 78 ISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFP----EFLYNCT-KLQNLDLSQNYFVGPIPSDIDRI-----SGL 147 (969)
Q Consensus 78 l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~L 147 (969)
..++++++++.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5688899999988888888889999999999997776 7788898 99999999999998878788775 999
Q ss_pred cEEecCCCCCCCcCCCcccC----c-ccccceecccccccCcCCccc----CCC-CCcceeecccCCCCCCC--CCCccc
Q 002085 148 QCIDLGGNNFSGDIPRSIGR----L-SELQTLYLYMNEFNGTFPKEI----GDL-SNLEVLGLAYNSNFKPA--MIPIEF 215 (969)
Q Consensus 148 ~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~L~~N~~~~~~--~~p~~~ 215 (969)
++|+|++|.+++..+..+.. + ++|++|+|++|++++..+..+ ..+ ++|++|+|++|.+...+ .++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 99999999999777665444 4 899999999999997776554 343 69999999999754222 334455
Q ss_pred cccC-CCcEEEccCCcccccCchhhc----CC-CchhhhhccCCcCCCC----CCchhhc-CcccchhhccCcccccCCC
Q 002085 216 GMLK-KLKTLWMTEANLIGEIPEAMS----NL-SSLEILALNGNHLEGA----IPSGLFL-LNNLTQLFLYDNILSGEIP 284 (969)
Q Consensus 216 ~~l~-~L~~L~L~~n~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~----~p~~l~~-l~~L~~L~L~~N~l~~~~~ 284 (969)
..++ +|++|+|++|++.+..+..+. .+ ++|++|+|++|++++. ++..+.. .++|++|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 6665 999999999999988876554 44 6999999999999863 4555555 4599999999999987655
Q ss_pred Cchhh-----cccccccccCcccccc-------CCccccCcccchhhhhccccCcCcCCcccc
Q 002085 285 SSVEA-----LKLTDIDLSMNNLTGS-------IPEEFGKLKNLQLLGLFSNHLSGEVPASIG 335 (969)
Q Consensus 285 ~~~~~-----~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 335 (969)
..+.. .+|+.|+|++|.+.+. ++..+..+++|+.|++++|++.+..+..+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHH
Confidence 44322 2699999999995533 334678899999999999999876554443
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.9e-23 Score=216.42 Aligned_cols=185 Identities=15% Similarity=0.157 Sum_probs=128.2
Q ss_pred CCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCc-CCCCCCCCcccCCCCcEEecCC-CCCCCcCCCcc
Q 002085 88 KIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY-FVGPIPSDIDRISGLQCIDLGG-NNFSGDIPRSI 165 (969)
Q Consensus 88 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~ 165 (969)
.+|. +. ++|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 33 389999999999997777789999999999999997 8866667889999999999998 99987767788
Q ss_pred cCcccccceecccccccCcCCcccCCCCCcc---eeecccC-CCCCCCCCCccccccCCCc-EEEccCCcccccCchhhc
Q 002085 166 GRLSELQTLYLYMNEFNGTFPKEIGDLSNLE---VLGLAYN-SNFKPAMIPIEFGMLKKLK-TLWMTEANLIGEIPEAMS 240 (969)
Q Consensus 166 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~~~~~~~~p~~~~~l~~L~-~L~L~~n~l~~~~p~~~~ 240 (969)
.++++|++|+|++|++++ +|. |+.+++|+ +|++++| .+ ....+..|..+++|+ .|++++|++....+..|.
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l--~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~ 177 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYM--TSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFN 177 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTC--CEECTTTTTTTBSSEEEEECCSCCCCEECTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcch--hhcCcccccchhcceeEEEcCCCCCcccCHhhcC
Confidence 899999999999999985 665 77888777 8888877 42 122233455555555 555555555532222333
Q ss_pred CCCchhhhhccCCc-CCCCCCchhhcC-cccchhhccCcccc
Q 002085 241 NLSSLEILALNGNH-LEGAIPSGLFLL-NNLTQLFLYDNILS 280 (969)
Q Consensus 241 ~l~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~ 280 (969)
. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 178 ~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 178 G-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp T-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred C-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 3 555555555553 554434444445 55555555555554
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=7.8e-25 Score=245.34 Aligned_cols=264 Identities=17% Similarity=0.171 Sum_probs=208.4
Q ss_pred EEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC----CCcccCC-CCcEEecCCCCCCCcCCCcccCc-----cc
Q 002085 101 TIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP----SDIDRIS-GLQCIDLGGNNFSGDIPRSIGRL-----SE 170 (969)
Q Consensus 101 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 170 (969)
.++|+.|+++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|++++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999999988888889999999999997766 7788888 99999999999998878778776 99
Q ss_pred ccceecccccccCcCCcccCC----C-CCcceeecccCCCCCCCCCCcc----ccc-cCCCcEEEccCCcccccC----c
Q 002085 171 LQTLYLYMNEFNGTFPKEIGD----L-SNLEVLGLAYNSNFKPAMIPIE----FGM-LKKLKTLWMTEANLIGEI----P 236 (969)
Q Consensus 171 L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~~~~~~~~p~~----~~~-l~~L~~L~L~~n~l~~~~----p 236 (969)
|++|+|++|++++..+..+.. + ++|++|+|++|++.. ..+.. +.. .++|++|+|++|++.... +
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~--~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS--KSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG--SCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc--HHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 999999999999877775444 4 899999999997432 22223 334 369999999999998644 4
Q ss_pred hhhcCCC-chhhhhccCCcCCCCCCchhhc----C-cccchhhccCcccccC----CCCchhh-c-ccccccccCccccc
Q 002085 237 EAMSNLS-SLEILALNGNHLEGAIPSGLFL----L-NNLTQLFLYDNILSGE----IPSSVEA-L-KLTDIDLSMNNLTG 304 (969)
Q Consensus 237 ~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~L~~N~l~~~----~~~~~~~-~-~L~~L~Ls~N~l~~ 304 (969)
..+..++ +|++|+|++|++++..+..+.. . ++|++|+|++|.++.. ++..+.. . +|+.|+|++|.+++
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 4556665 9999999999999877765554 4 6999999999999863 3444443 2 79999999999987
Q ss_pred cCC----ccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccc
Q 002085 305 SIP----EEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLW 376 (969)
Q Consensus 305 ~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 376 (969)
..+ ..+..+++|+.|++++|.+.+..+..+. .++..+.++++|+.||+++|++.+..+..+.
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~----------~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCK----------ALGAAFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHH----------HHHTTSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred HHHHHHHHHHhcCCCccEEEeccCCccccCHHHHH----------HHHHHhccCCceEEEecCCCcCCCcchHHHH
Confidence 554 3457789999999999997644333222 4456677889999999999999866554443
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=3.2e-25 Score=246.22 Aligned_cols=263 Identities=18% Similarity=0.248 Sum_probs=215.8
Q ss_pred CCCCCcceeeCCCeEEEEecCCCCCCCCCccccCC--CcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCC-CC
Q 002085 62 PCDWPEITCTFNSVTGISLRHKDITQKIPPIICDL--KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGP-IP 138 (969)
Q Consensus 62 ~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p 138 (969)
|..|.++.|+...++.++++++.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH
Confidence 4479999887777899999998876 4567777 8999999999999977665 66899999999999999866 78
Q ss_pred CCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccc-cccCc-CCcccCCCCCcceeecccC-CCCCCCCCCccc
Q 002085 139 SDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN-EFNGT-FPKEIGDLSNLEVLGLAYN-SNFKPAMIPIEF 215 (969)
Q Consensus 139 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~~~~~~~~p~~~ 215 (969)
..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+.. ..++..+
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~-~~~~~~~ 190 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE-KHVQVAV 190 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH-HHHHHHH
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh-HHHHHHH
Confidence 88899999999999999999888889999999999999999 68763 6777889999999999999 5321 2256778
Q ss_pred cccC-CCcEEEccCC--ccc-ccCchhhcCCCchhhhhccCCc-CCCCCCchhhcCcccchhhccCcccccCCCC---ch
Q 002085 216 GMLK-KLKTLWMTEA--NLI-GEIPEAMSNLSSLEILALNGNH-LEGAIPSGLFLLNNLTQLFLYDNILSGEIPS---SV 287 (969)
Q Consensus 216 ~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~---~~ 287 (969)
..++ +|++|++++| ++. +.+|..+.++++|++|+|++|. +++..+..+..+++|++|++++|. +..+. .+
T Consensus 191 ~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l 268 (336)
T 2ast_B 191 AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLEL 268 (336)
T ss_dssp HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGG
T ss_pred HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHH
Confidence 8999 9999999999 555 5678888899999999999999 777778889999999999999996 23333 34
Q ss_pred hhc-ccccccccCccccccCCccccCc-ccchhhhhccccCcCcCCcccc
Q 002085 288 EAL-KLTDIDLSMNNLTGSIPEEFGKL-KNLQLLGLFSNHLSGEVPASIG 335 (969)
Q Consensus 288 ~~~-~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~ 335 (969)
... +|+.|++++| ++ ...+..+ .+|+.|++++|++++..|..++
T Consensus 269 ~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 269 GEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred hcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 433 7999999999 43 2344454 3488888999999987776543
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=9.8e-23 Score=222.49 Aligned_cols=213 Identities=23% Similarity=0.305 Sum_probs=120.7
Q ss_pred CCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhh-cccccccccCccccccCCccccCcccchhhh
Q 002085 242 LSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEA-LKLTDIDLSMNNLTGSIPEEFGKLKNLQLLG 320 (969)
Q Consensus 242 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 320 (969)
+..+..+.+..+.+++.+ .+..+++|++|++++|.++. ++. +.. .+|+.|++++|++++..+ +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~~-~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CTT-GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-chh-hhccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 344556677777776532 24456777777777777763 332 332 256666666666664332 55666666666
Q ss_pred hccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCcccc
Q 002085 321 LFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA 400 (969)
Q Consensus 321 L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 400 (969)
+++|++++ ++ .+..+++|+.|++++|++++ ++. +..+++
T Consensus 92 L~~n~l~~------------------~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~-------------------- 130 (308)
T 1h6u_A 92 LSGNPLKN------------------VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSN-------------------- 130 (308)
T ss_dssp CCSCCCSC------------------CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTT--------------------
T ss_pred ccCCcCCC------------------ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCC--------------------
Confidence 66665552 11 24455555666666665553 221 444444
Q ss_pred ccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEc
Q 002085 401 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL 480 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 480 (969)
|++|+|++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 131 --L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L 202 (308)
T 1h6u_A 131 --LQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHL 202 (308)
T ss_dssp --CCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred --CCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEc
Confidence 4455555555544333 5555666666666666654322 5666666666666666664322 566666666666
Q ss_pred cCccccCCCCcccccccccceEeccCccccc
Q 002085 481 ARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 511 (969)
Q Consensus 481 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 511 (969)
++|++++.. .+..+++|+.|+|++|++++
T Consensus 203 ~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 203 KNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 666666433 26666666666666666663
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=7.8e-23 Score=239.32 Aligned_cols=206 Identities=20% Similarity=0.351 Sum_probs=163.0
Q ss_pred CCCCCCCCCC-----CCCcc-eeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEe
Q 002085 54 QSWTSTSSPC-----DWPEI-TCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLD 127 (969)
Q Consensus 54 ~sw~~~~~~c-----~w~gv-~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 127 (969)
.+|..+.++| .|.|+ .|..++++.|+|+++++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~ 106 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLD 106 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEE
T ss_pred HHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEE
Confidence 4576666778 69999 7987889999999999987 777663 88999999999999 677 5579999999
Q ss_pred ccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCC
Q 002085 128 LSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFK 207 (969)
Q Consensus 128 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~ 207 (969)
|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|++..
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 99999996 777 665 99999999999996 676 68899999999999996 665 57899999999996433
Q ss_pred CCCCCccccccCCCcEEEccCCcccccCchhhcCCCch-------hhhhccCCcCCCCCCchhhcCcccchhhccCcccc
Q 002085 208 PAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSL-------EILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280 (969)
Q Consensus 208 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (969)
+|. |. ++|+.|+|++|++. .+|. |.. +| +.|+|++|+|+ .+|..++.+++|+.|+|++|+++
T Consensus 175 ---lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 175 ---LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp ---CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred ---cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 555 55 78888888888777 5555 544 66 77888888887 56777777777777777777777
Q ss_pred cCCCCchhh
Q 002085 281 GEIPSSVEA 289 (969)
Q Consensus 281 ~~~~~~~~~ 289 (969)
+.+|..+..
T Consensus 244 ~~~p~~l~~ 252 (571)
T 3cvr_A 244 SRIRESLSQ 252 (571)
T ss_dssp HHHHHHHHH
T ss_pred CcCHHHHHH
Confidence 766665544
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=7.5e-23 Score=223.98 Aligned_cols=227 Identities=17% Similarity=0.161 Sum_probs=182.9
Q ss_pred CeEEEEecCCCCCCCCCc---cccCCCcccEEEccCCCCCCCCCccc--CCCCCCCEEeccCCcCCCCCC----CCcccC
Q 002085 74 SVTGISLRHKDITQKIPP---IICDLKNLTTIDLSSNSIPGEFPEFL--YNCTKLQNLDLSQNYFVGPIP----SDIDRI 144 (969)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 144 (969)
.++.+.+.+..+....-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356666666665432111 12235679999999999999999988 999999999999999997665 344679
Q ss_pred CCCcEEecCCCCCCCcCCCcccCcccccceecccccccCc--C--CcccCCCCCcceeecccCCCCCCCCCCcc-ccccC
Q 002085 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGT--F--PKEIGDLSNLEVLGLAYNSNFKPAMIPIE-FGMLK 219 (969)
Q Consensus 145 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~~~~~~~~p~~-~~~l~ 219 (969)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..++.+++|++|+|++|++......+.. ++.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 9999999999999988889999999999999999998752 2 23457899999999999975432222222 57889
Q ss_pred CCcEEEccCCcccccCchhhcCC---CchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhccccccc
Q 002085 220 KLKTLWMTEANLIGEIPEAMSNL---SSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDID 296 (969)
Q Consensus 220 ~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~ 296 (969)
+|++|+|++|++.+..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |......+|+.|+
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~ 300 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLT 300 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEE
Confidence 99999999999999988888777 69999999999999 6787775 8999999999999964 3322234799999
Q ss_pred ccCccccc
Q 002085 297 LSMNNLTG 304 (969)
Q Consensus 297 Ls~N~l~~ 304 (969)
|++|+++.
T Consensus 301 L~~N~l~~ 308 (310)
T 4glp_A 301 LDGNPFLV 308 (310)
T ss_dssp CSSTTTSC
T ss_pred CcCCCCCC
Confidence 99999974
No 342
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.3e-21 Score=200.64 Aligned_cols=186 Identities=19% Similarity=0.216 Sum_probs=146.1
Q ss_pred CCCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC
Q 002085 61 SPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSD 140 (969)
Q Consensus 61 ~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 140 (969)
..|.|.+|.|+...++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..
T Consensus 5 C~C~~~~v~c~~~~l~~-----------~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTS-----------VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV 71 (208)
T ss_dssp CEEETTEEECCSSCCSS-----------CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CEECCCEEEecCCCccC-----------CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhh
Confidence 34789999997544332 33333 358999999999999777778899999999999999999777777
Q ss_pred cccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCC
Q 002085 141 IDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKK 220 (969)
Q Consensus 141 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~ 220 (969)
|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|++. ...+..|..+++
T Consensus 72 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l~~ 149 (208)
T 2o6s_A 72 FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK--SVPDGVFDRLTS 149 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS--CCCTTTTTTCTT
T ss_pred cCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc--eeCHHHhccCCC
Confidence 899999999999999999776677899999999999999999777777899999999999998633 333444777777
Q ss_pred CcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcc
Q 002085 221 LKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNN 268 (969)
Q Consensus 221 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 268 (969)
|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 8888887776654 3456777777777777777776665443
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=8e-25 Score=247.79 Aligned_cols=251 Identities=22% Similarity=0.276 Sum_probs=178.5
Q ss_pred CCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhcccc---CcCcCCccc
Q 002085 258 AIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNH---LSGEVPASI 334 (969)
Q Consensus 258 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~ 334 (969)
.++..+..+++|++|+|++|+++...+.. ++..+..+++|+.|+|++|. +++.+|..+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~-------------------l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~ 83 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARW-------------------LSENIASKKDLEIAEFSDIFTGRVKDEIPEAL 83 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHH-------------------HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHH
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHH-------------------HHHHHHhCCCccEEeCcccccCccccchhHHH
Confidence 34555555666666666666555332221 22335566677777776643 333444333
Q ss_pred ccccccCcccccCCCCCCCCccCcEEEcccccccC----CCCcccccccCCCccccCCCccccccCcccc----------
Q 002085 335 GVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSG----ELPTGLWTTFNLSSLMLSDNTISGELPSKTA---------- 400 (969)
Q Consensus 335 ~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------- 400 (969)
. .+...+..+++|++|+|++|++++ .+|..+..+++|+.|+|++|.+++..+....
T Consensus 84 ~----------~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~ 153 (386)
T 2ca6_A 84 R----------LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNK 153 (386)
T ss_dssp H----------HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred H----------HHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhh
Confidence 2 122334667888888888888876 3666777788888888888888643332211
Q ss_pred -----ccccEEEeeccccC-CCcc---cccCCcccchhhcccCCccc--c---ccCccccCccccchhhccCcccC----
Q 002085 401 -----WNLTRLEISNNRFS-GQIQ---RGVGSWKNLIVFKASNNLFS--G---EIPVELTSLSHLNTLLLDGNKLS---- 462 (969)
Q Consensus 401 -----~~L~~L~Ls~N~l~-~~~~---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~---- 462 (969)
++|++|+|++|+++ +.++ ..+..+++|++|++++|.|+ | ..|..+..+++|+.|+|++|+++
T Consensus 154 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~ 233 (386)
T 2ca6_A 154 KAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS 233 (386)
T ss_dssp HHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH
T ss_pred hcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHH
Confidence 58899999999987 4444 45667888999999999987 3 34557888999999999999996
Q ss_pred CCCCcccccccCCCEEEccCccccCC----CCccc--ccccccceEeccCccccc----cCCCcc-ccc-cccEEEeecC
Q 002085 463 GKLPSQIVSWTSLNNLNLARNELSGE----IPKAI--GSLLVMVSLDLSGNQFSG----EIPPEI-GQL-KLNTFNLSSN 530 (969)
Q Consensus 463 ~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~ls~N~l~g----~~p~~~-~~l-~L~~l~ls~N 530 (969)
+.+|..+..+++|+.|+|++|+|++. +|..+ +.+++|+.|+|++|++++ .+|..+ ..+ .|++|++++|
T Consensus 234 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 234 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 57788888999999999999999865 56666 348999999999999997 588877 555 4999999999
Q ss_pred cCCCCCC
Q 002085 531 KLYGNIP 537 (969)
Q Consensus 531 ~l~~~~p 537 (969)
++++..|
T Consensus 314 ~l~~~~~ 320 (386)
T 2ca6_A 314 RFSEEDD 320 (386)
T ss_dssp BSCTTSH
T ss_pred cCCcchh
Confidence 9987654
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=2.9e-22 Score=210.44 Aligned_cols=197 Identities=15% Similarity=0.167 Sum_probs=172.3
Q ss_pred CCeEEEEecCCCCCCCCCccccCCCcccEEEccCCC-CCCCCCcccCCCCCCCEEeccC-CcCCCCCCCCcccCCCCcEE
Q 002085 73 NSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNS-IPGEFPEFLYNCTKLQNLDLSQ-NYFVGPIPSDIDRISGLQCI 150 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L 150 (969)
..++.|+++++++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 469999999999998888899999999999999997 8866677899999999999999 99997777899999999999
Q ss_pred ecCCCCCCCcCCCcccCccccc---ceecccc-cccCcCCcccCCCCCcc-eeecccCCCCCCCCCCccccccCCCcEEE
Q 002085 151 DLGGNNFSGDIPRSIGRLSELQ---TLYLYMN-EFNGTFPKEIGDLSNLE-VLGLAYNSNFKPAMIPIEFGMLKKLKTLW 225 (969)
Q Consensus 151 ~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~~~~~~~~p~~~~~l~~L~~L~ 225 (969)
+|++|++++ +|. |+.+++|+ +|++++| ++++..+..|.++++|+ +|++++|++. .+|......++|++|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~---~i~~~~~~~~~L~~L~ 185 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT---SVQGYAFNGTKLDAVY 185 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC---EECTTTTTTCEEEEEE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc---ccCHhhcCCCCCCEEE
Confidence 999999995 776 88899998 9999999 99988788899999999 9999999643 4555443448999999
Q ss_pred ccCCc-ccccCchhhcCC-CchhhhhccCCcCCCCCCchhhcCcccchhhccCc
Q 002085 226 MTEAN-LIGEIPEAMSNL-SSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDN 277 (969)
Q Consensus 226 L~~n~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 277 (969)
+++|. +.+..+..|.++ ++|+.|+|++|++++. |.. .+++|+.|+++++
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 99994 887778889999 9999999999999954 543 5678888888765
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=5.6e-22 Score=220.90 Aligned_cols=236 Identities=19% Similarity=0.152 Sum_probs=152.7
Q ss_pred cCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC-CCcccCCCCcE-EecCCCCCC
Q 002085 81 RHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIP-SDIDRISGLQC-IDLGGNNFS 158 (969)
Q Consensus 81 ~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~L~~N~l~ 158 (969)
++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++++|+. ++++.|+|+
T Consensus 17 ~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~ 93 (350)
T 4ay9_X 17 QESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLL 93 (350)
T ss_dssp ESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCC
T ss_pred cCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCccc
Confidence 344444 355544 3578999999999985555678999999999999999876665 46788888765 666778888
Q ss_pred CcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchh
Q 002085 159 GDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEA 238 (969)
Q Consensus 159 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 238 (969)
...|..|.++++|++|++++|++++..+..+....++..|++.++. ++....+..
T Consensus 94 ~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~-------------------------~i~~l~~~~ 148 (350)
T 4ay9_X 94 YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI-------------------------NIHTIERNS 148 (350)
T ss_dssp EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT-------------------------TCCEECTTS
T ss_pred ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccc-------------------------ccccccccc
Confidence 7778888899999999999999887666667777777777776542 122222233
Q ss_pred hcCCC-chhhhhccCCcCCCCCCchhhcCcccchhhccC-cccccCCCCchhhc-ccccccccCccccccCCccccCccc
Q 002085 239 MSNLS-SLEILALNGNHLEGAIPSGLFLLNNLTQLFLYD-NILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKN 315 (969)
Q Consensus 239 ~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~ 315 (969)
|..+. .++.|+|++|+|+ .+|...+...+|+.|++++ |.++...+..|..+ +|+.|||++|+|+...+..|.++++
T Consensus 149 f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~ 227 (350)
T 4ay9_X 149 FVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKK 227 (350)
T ss_dssp STTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCE
T ss_pred hhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchH
Confidence 44433 3555666666666 3344444455566666653 44443334444444 5666666666666555555666666
Q ss_pred chhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEccccc
Q 002085 316 LQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNR 366 (969)
Q Consensus 316 L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 366 (969)
|+.+++. .+. .+| .+.++++|+.++++++.
T Consensus 228 L~~l~~~--~l~------------------~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 228 LRARSTY--NLK------------------KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp EECTTCT--TCC------------------CCC-CTTTCCSCCEEECSCHH
T ss_pred hhhccCC--CcC------------------cCC-CchhCcChhhCcCCCCc
Confidence 6655542 222 333 25567777777776554
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=5.7e-22 Score=209.82 Aligned_cols=159 Identities=21% Similarity=0.187 Sum_probs=85.5
Q ss_pred ccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccC
Q 002085 355 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASN 434 (969)
Q Consensus 355 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 434 (969)
++++.|+|++|++++..+..+..+++|+.|+|++|.|+ +..+..|..+++|++|++++
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----------------------~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ----------------------TLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC----------------------CCCTTTTTTCTTCCEEECTT
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC----------------------ccCHhHhccCCcCCEEECCC
Confidence 35566666666666555555555555555555555554 44444455555555555555
Q ss_pred CccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCC
Q 002085 435 NLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIP 514 (969)
Q Consensus 435 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p 514 (969)
|+|++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++..+..|+.+++|+.|||++|+|++..|
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 55554444455555555555555555554444444555555555555555554444455555555555555555554444
Q ss_pred Ccccccc-ccEEEeecCcCCCC
Q 002085 515 PEIGQLK-LNTFNLSSNKLYGN 535 (969)
Q Consensus 515 ~~~~~l~-L~~l~ls~N~l~~~ 535 (969)
..+..++ |++|+|++|++.+.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHhCCCCCCEEEeeCCceeCC
Confidence 4454443 55555555555554
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.2e-23 Score=233.41 Aligned_cols=256 Identities=20% Similarity=0.238 Sum_probs=162.4
Q ss_pred cccEEEccCCCCCCCCCcccCCC--CCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCc-CCCcccCcccccce
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNC--TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGD-IPRSIGRLSELQTL 174 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 174 (969)
.++.||+++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3778999988876 5666777 8889999999988876655 56788899999999888765 77778888889999
Q ss_pred ecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCC-ccccc-CchhhcCCC-chhhhhcc
Q 002085 175 YLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEA-NLIGE-IPEAMSNLS-SLEILALN 251 (969)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~-~L~~L~L~ 251 (969)
+|++|++++..+..++.+++|++|++++|.......++..+..+++|++|++++| ++.+. ++..+..++ +|++|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 9988888877888888888888888888731111124444566666666666666 55543 455555666 66666666
Q ss_pred CC--cCC-CCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcC
Q 002085 252 GN--HLE-GAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328 (969)
Q Consensus 252 ~N--~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 328 (969)
+| .++ +.+|..+..+++|++|++++|.+ +++..+..+..+++|+.|++++|. +
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~----------------------l~~~~~~~l~~l~~L~~L~l~~~~--~ 259 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM----------------------LKNDCFQEFFQLNYLQHLSLSRCY--D 259 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTT----------------------CCGGGGGGGGGCTTCCEEECTTCT--T
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCc----------------------CCHHHHHHHhCCCCCCEeeCCCCC--C
Confidence 66 333 23344444455555555555441 344444455556666666666664 1
Q ss_pred cCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCccccccc-CCCccccCCCccccccCccc
Q 002085 329 EVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTF-NLSSLMLSDNTISGELPSKT 399 (969)
Q Consensus 329 ~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~ 399 (969)
..+..+ ..++++++|+.|++++| ++ ...+..+. .+..|+++.|++++..|...
T Consensus 260 ~~~~~~--------------~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 260 IIPETL--------------LELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp CCGGGG--------------GGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred CCHHHH--------------HHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 111110 13445666777777766 32 12333332 36666677777776666543
No 348
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=2.7e-24 Score=243.43 Aligned_cols=242 Identities=21% Similarity=0.265 Sum_probs=174.8
Q ss_pred CCccccCCCcccEEEccCCCCCCC----CCcccCCCCCCCEEeccCC---cCCCCCCCCc-------ccCCCCcEEecCC
Q 002085 89 IPPIICDLKNLTTIDLSSNSIPGE----FPEFLYNCTKLQNLDLSQN---YFVGPIPSDI-------DRISGLQCIDLGG 154 (969)
Q Consensus 89 ~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~L~~ 154 (969)
++..+..+++|++|+|++|.+++. ++..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 556677778888888888888765 3344667888888888875 4444555544 6778888888888
Q ss_pred CCCCC----cCCCcccCcccccceecccccccCcCCcccCC----C---------CCcceeecccCCCCCCCCCC---cc
Q 002085 155 NNFSG----DIPRSIGRLSELQTLYLYMNEFNGTFPKEIGD----L---------SNLEVLGLAYNSNFKPAMIP---IE 214 (969)
Q Consensus 155 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----l---------~~L~~L~L~~N~~~~~~~~p---~~ 214 (969)
|.+++ .+|..+..+++|++|+|++|.+++..+..+.. + ++|++|+|++|++.. ..+| ..
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~l~~~ 182 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN-GSMKEWAKT 182 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG-GGHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc-HHHHHHHHH
Confidence 88876 46667778888888888888886544433333 3 788888888886431 2233 45
Q ss_pred ccccCCCcEEEccCCcccc-----cCchhhcCCCchhhhhccCCcCC----CCCCchhhcCcccchhhccCcccccC---
Q 002085 215 FGMLKKLKTLWMTEANLIG-----EIPEAMSNLSSLEILALNGNHLE----GAIPSGLFLLNNLTQLFLYDNILSGE--- 282 (969)
Q Consensus 215 ~~~l~~L~~L~L~~n~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~--- 282 (969)
+..+++|++|+|++|++.. ..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 6778888888888888763 34447788888888888888885 46677778888888888888888765
Q ss_pred -CCCchhh---cccccccccCccccc----cCCccc-cCcccchhhhhccccCcCcCC
Q 002085 283 -IPSSVEA---LKLTDIDLSMNNLTG----SIPEEF-GKLKNLQLLGLFSNHLSGEVP 331 (969)
Q Consensus 283 -~~~~~~~---~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~p 331 (969)
++..+.. .+|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 3444432 368888888888887 467666 668899999999999886543
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=8e-22 Score=211.58 Aligned_cols=148 Identities=15% Similarity=0.054 Sum_probs=116.9
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcH---------------HHHHHHHHHHHHHhccccCceeeE
Q 002085 637 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQ---------------KLEKEFIAEIEILGTIRHANIVKL 701 (969)
Q Consensus 637 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~h~niv~l 701 (969)
-|...+.||+|+||.||+|.+ .+|+.||||+++....... .....+.+|++++++++| +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence 355669999999999999999 7899999999854321110 245679999999999984 444
Q ss_pred EEEEEcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCC
Q 002085 702 WCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSS 781 (969)
Q Consensus 702 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 781 (969)
.+++.. +..|+||||++|++|.+ +.. .....++.|++.||+|||+. +|+||||||+
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------------------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~ 222 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV-------------------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQY 222 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC-------------------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch-------------------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHH
Confidence 444433 56799999999999988 421 12447999999999999988 9999999999
Q ss_pred cEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhccc
Q 002085 782 NILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYT 828 (969)
Q Consensus 782 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 828 (969)
||+++ ++.+||+|||+|+.. ..|+|||++.+
T Consensus 223 NILl~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~r 253 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVEV---------------GEEGWREILER 253 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEET---------------TSTTHHHHHHH
T ss_pred HEEEE-CCcEEEEECCCCeEC---------------CCCCHHHHHHH
Confidence 99999 999999999998642 34789998754
No 350
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=8.3e-22 Score=215.14 Aligned_cols=175 Identities=19% Similarity=0.267 Sum_probs=132.2
Q ss_pred CCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhh
Q 002085 351 LGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVF 430 (969)
Q Consensus 351 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 430 (969)
+..+++|++|+|++|++++. +. +..+++|+.|+|++|++++........+|++|+|++|++++..+ +..+++|++|
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 134 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVL 134 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEE
T ss_pred hhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCchh--hcCCCCCCEE
Confidence 44455555555555555532 22 55555666666666665543222234567788888888876533 8899999999
Q ss_pred cccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccc
Q 002085 431 KASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 431 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
++++|.+++..+ +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|++++. +. +..+++|+.|+|++|+++
T Consensus 135 ~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 135 YLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp ECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccC
Confidence 999999996544 8899999999999999996 444 89999999999999999964 43 899999999999999999
Q ss_pred ccCCCcccccc-ccEEEeecCcCCCCCCc
Q 002085 511 GEIPPEIGQLK-LNTFNLSSNKLYGNIPD 538 (969)
Q Consensus 511 g~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 538 (969)
+.. .+..++ |+.|++++|++++ .|.
T Consensus 209 ~~~--~l~~l~~L~~L~l~~N~i~~-~~~ 234 (308)
T 1h6u_A 209 DVS--PLANTSNLFIVTLTNQTITN-QPV 234 (308)
T ss_dssp BCG--GGTTCTTCCEEEEEEEEEEC-CCE
T ss_pred ccc--cccCCCCCCEEEccCCeeec-CCe
Confidence 644 377775 9999999999985 443
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.5e-21 Score=228.49 Aligned_cols=187 Identities=25% Similarity=0.346 Sum_probs=107.7
Q ss_pred ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCC
Q 002085 291 KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGE 370 (969)
Q Consensus 291 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 370 (969)
+++.|+|++|.+++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~------------------~ip---~~l~~L~~L~Ls~N~l~~- 114 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI------------------SLP---ELPASLEYLDACDNRLST- 114 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS------------------CCC---CCCTTCCEEECCSSCCSC-
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc------------------ccc---cccCCCCEEEccCCCCCC-
Confidence 34455555555553 333331 45555555555555 222 124556666666666664
Q ss_pred CCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccc
Q 002085 371 LPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSH 450 (969)
Q Consensus 371 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 450 (969)
+|. +.. +|+.|+|++|+|++ +|. ..++|+.|+|++|+|++ +|. .+++|++|++++|.|++ +|. |. ++
T Consensus 115 ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~ 181 (571)
T 3cvr_A 115 LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ES 181 (571)
T ss_dssp CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TT
T ss_pred cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CC
Confidence 444 433 56666666666654 333 44566666666666665 333 35566666666666664 554 44 66
Q ss_pred cchhhccCcccCCCCCcccccccCC-------CEEEccCccccCCCCcccccccccceEeccCccccccCCCccccc
Q 002085 451 LNTLLLDGNKLSGKLPSQIVSWTSL-------NNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL 520 (969)
Q Consensus 451 L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l 520 (969)
|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.+|..++.+
T Consensus 182 L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 182 LEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 677777777766 5555 443 55 77777777776 467666667777777777777777766666554
No 352
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=5.5e-21 Score=212.83 Aligned_cols=199 Identities=15% Similarity=0.125 Sum_probs=146.9
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCC-cccCcccccc-eecc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPR-SIGRLSELQT-LYLY 177 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~L~ 177 (969)
++++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|. .|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 46788999998 778766 36899999999999855556789999999999999998766654 6788888765 5667
Q ss_pred cccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccC-CcCC
Q 002085 178 MNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNG-NHLE 256 (969)
Q Consensus 178 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~ 256 (969)
.|+++...|..|.++++|++|++++|+ +.+..+..+....++..|++.+ |+++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~--------------------------l~~~~~~~~~~~~~l~~l~l~~~~~i~ 142 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTG--------------------------IKHLPDVHKIHSLQKVLLDIQDNINIH 142 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEEC--------------------------CSSCCCCTTCCBSSCEEEEEESCTTCC
T ss_pred CCcccccCchhhhhccccccccccccc--------------------------cccCCchhhcccchhhhhhhccccccc
Confidence 788887778888888888888888775 3333333455555677777755 5666
Q ss_pred CCCCchhhcCc-ccchhhccCcccccCCCCchhhcccccccccC-ccccccCCccccCcccchhhhhccccCc
Q 002085 257 GAIPSGLFLLN-NLTQLFLYDNILSGEIPSSVEALKLTDIDLSM-NNLTGSIPEEFGKLKNLQLLGLFSNHLS 327 (969)
Q Consensus 257 ~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 327 (969)
...+..|..+. .++.|+|++|+|+...+..+...+++.|++++ |.++...+..|..+++|+.|++++|+|+
T Consensus 143 ~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 143 TIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp EECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 54445555554 57888888888887666667767788888864 5666444456777888888888888777
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=5.9e-22 Score=240.84 Aligned_cols=263 Identities=21% Similarity=0.197 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHHHcCCCC--CCCCCCC-CCCCCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCC
Q 002085 32 PNTEERTILLNLKQQLGNPP--SLQSWTS-TSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNS 108 (969)
Q Consensus 32 ~~~~~~~all~~k~~~~~~~--~l~sw~~-~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~ 108 (969)
..+.++++|+++..++..+. .-..|.. .+..+.|.++.++..+++.++|.++++... +..+ |+.++|+.|.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~~~ 202 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEA-NQAL-----LQHKKLSQYS 202 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcc-hhhH-----hhcCccCccc
Confidence 34568899999998874332 2345643 345678999999999999999999888763 3333 3444444444
Q ss_pred CCC---------CCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccc
Q 002085 109 IPG---------EFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179 (969)
Q Consensus 109 l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (969)
|.+ ..|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|
T Consensus 203 i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N 280 (727)
T 4b8c_D 203 IDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHN 280 (727)
T ss_dssp -------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTS
T ss_pred ccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCC
Confidence 432 44666777777777777777776 56666667777777777777777 66777777777777777777
Q ss_pred cccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCc-hhhhhccCCcCCCC
Q 002085 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSS-LEILALNGNHLEGA 258 (969)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~ 258 (969)
+|+ .+|..|++|++|++|+|++|.+ ..+|..|+.+++|+.|+|++|.+.+.+|..+..+.. +..|+|++|.+++.
T Consensus 281 ~l~-~lp~~~~~l~~L~~L~L~~N~l---~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 281 RLT-SLPAELGSCFQLKYFYFFDNMV---TTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp CCS-SCCSSGGGGTTCSEEECCSSCC---CCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred cCC-ccChhhcCCCCCCEEECCCCCC---CccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCc
Confidence 777 5676777777777777777642 345555666666666666666666666655544322 22355556666555
Q ss_pred CCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCc
Q 002085 259 IPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLS 327 (969)
Q Consensus 259 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 327 (969)
+|. .|..|++++|... ....+.+.+..+..+..+..+....+++|.+.
T Consensus 357 ~p~------~l~~l~l~~n~~~---------------~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 357 LPH------ERRFIEINTDGEP---------------QREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp CCC------C--------------------------------------------------------CCC
T ss_pred Ccc------ccceeEeeccccc---------------ccccCCccccccchhhcccccceeeeeccccc
Confidence 543 2333444443100 00112334444445556666667777777665
No 354
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2e-20 Score=191.79 Aligned_cols=152 Identities=23% Similarity=0.253 Sum_probs=107.5
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (969)
+.+++++++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46778888887 556544 468999999999999777777889999999999999999666667888999999999999
Q ss_pred cccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCC
Q 002085 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLE 256 (969)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 256 (969)
++++..+..|.++++|++|++++|++. ...+..|..+++|++|++++|++.+..+..|..+++|++|+|++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQ--SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCc--ccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 998776677788888888888888532 222333455555555555555554444444455555555555555444
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=8.8e-20 Score=189.83 Aligned_cols=137 Identities=23% Similarity=0.331 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcC
Q 002085 54 QSWTSTSSPCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYF 133 (969)
Q Consensus 54 ~sw~~~~~~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 133 (969)
.-|+.+.+.|+|.+|.|+...++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 76 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76 (229)
T ss_dssp -CCCCTTCEEETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred hccCCCCCEEeCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC
Confidence 45777888999999999754433 3444332 7888999999999988888888899999999999998
Q ss_pred CCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCC
Q 002085 134 VGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 134 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+
T Consensus 77 ~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 77 GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred CCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 7666667788888888888888888666667788888888888888888 667777777777777777775
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.1e-19 Score=187.80 Aligned_cols=137 Identities=23% Similarity=0.194 Sum_probs=95.5
Q ss_pred ccccEEEeeccccCCCcc-cccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEE
Q 002085 401 WNLTRLEISNNRFSGQIQ-RGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLN 479 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 479 (969)
..+++|+|++|+|++..+ ..|..+++|++|++++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 345566666666665543 3466677777777777777766666777777777777777777766666677777777777
Q ss_pred ccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCCCC
Q 002085 480 LARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGNIP 537 (969)
Q Consensus 480 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~~p 537 (969)
|++|+|++..|..|..+++|+.|+|++|+|++..|..+..++ |++|+|++|++.+..+
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 777777766677777777777777777777766677777664 7777777777776554
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.8e-19 Score=182.93 Aligned_cols=151 Identities=26% Similarity=0.311 Sum_probs=112.9
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.+++++++++. +|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 34555555553 455443 678999999999987777788889999999999999988888889999999999999999
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCccc
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLI 232 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~ 232 (969)
|+...+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++. ...+..|..+++|+.|+|++|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ--TIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS--CCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC--EECHHHHhCCCCCCEEEeCCCCcC
Confidence 98655566788888999999999988888888888888888888888522 222334555555555555555543
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1e-19 Score=215.41 Aligned_cols=149 Identities=26% Similarity=0.339 Sum_probs=80.8
Q ss_pred CCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcc
Q 002085 353 NCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKA 432 (969)
Q Consensus 353 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 432 (969)
.+++|+.|+|++|++++..| +..+++|+.|+|++|.|++........+|+.|+|++|+|++. ..+..+++|+.|+|
T Consensus 63 ~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 63 YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 138 (605)
T ss_dssp GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEEC
T ss_pred cCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEEC
Confidence 33444444444444432222 334444444444444443322112223455555555555542 23555666666666
Q ss_pred cCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccc
Q 002085 433 SNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSG 511 (969)
Q Consensus 433 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g 511 (969)
++|.|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|++++
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCcC
Confidence 66666643 456666677777777777765444 6666777777777777764 3 346667777777777777764
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=3.5e-19 Score=192.51 Aligned_cols=173 Identities=23% Similarity=0.320 Sum_probs=148.2
Q ss_pred CCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhh
Q 002085 351 LGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVF 430 (969)
Q Consensus 351 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 430 (969)
+..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|++++..+....++|++|+|++|++++. ..+..+++|++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 3467889999999999984 44 4888999999999999999876655567899999999999873 348999999999
Q ss_pred cccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccc
Q 002085 431 KASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 431 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
++++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 9999999864 5688999999999999999964 678999999999999999996544 999999999999999998
Q ss_pred ccCCCcccccc-ccEEEeecCcCCCC
Q 002085 511 GEIPPEIGQLK-LNTFNLSSNKLYGN 535 (969)
Q Consensus 511 g~~p~~~~~l~-L~~l~ls~N~l~~~ 535 (969)
+ +| .+..++ |+.|++++|+++..
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccCC
Confidence 5 55 477775 99999999999863
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.7e-18 Score=178.80 Aligned_cols=159 Identities=20% Similarity=0.229 Sum_probs=109.8
Q ss_pred CcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCC-cccCCCCCCCEEeccCCcCCCCCCCCcccC
Q 002085 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFP-EFLYNCTKLQNLDLSQNYFVGPIPSDIDRI 144 (969)
Q Consensus 66 ~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 144 (969)
.++.|.. +.++++++.++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|..+
T Consensus 7 ~~C~C~~---~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 80 (220)
T 2v70_A 7 EKCRCEG---TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA 80 (220)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC
Confidence 3455653 256677777664 565543 345788888888886654 457788888888888888887777788888
Q ss_pred CCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEE
Q 002085 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTL 224 (969)
Q Consensus 145 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L 224 (969)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++ ....|..|..+++|+.|
T Consensus 81 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l--~~~~~~~~~~l~~L~~L 158 (220)
T 2v70_A 81 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI--TTVAPGAFDTLHSLSTL 158 (220)
T ss_dssp TTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCC--CCBCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcC--CEECHHHhcCCCCCCEE
Confidence 8888888888888877777788888888888888888877777777777777777777752 22234444444444444
Q ss_pred EccCCccc
Q 002085 225 WMTEANLI 232 (969)
Q Consensus 225 ~L~~n~l~ 232 (969)
+|++|.+.
T Consensus 159 ~L~~N~l~ 166 (220)
T 2v70_A 159 NLLANPFN 166 (220)
T ss_dssp ECCSCCEE
T ss_pred EecCcCCc
Confidence 44444443
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.1e-18 Score=195.06 Aligned_cols=183 Identities=23% Similarity=0.269 Sum_probs=131.1
Q ss_pred CcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccC-CCCCCCEEeccCCcCCCCCCCCcccC
Q 002085 66 PEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLY-NCTKLQNLDLSQNYFVGPIPSDIDRI 144 (969)
Q Consensus 66 ~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l 144 (969)
.++.|.. ..+++++++++. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+
T Consensus 14 ~~C~C~~---~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 14 ANCLCAS---NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 4556763 356777777765 565443 4588999999999977777777 89999999999999987777889999
Q ss_pred CCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEE
Q 002085 145 SGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTL 224 (969)
Q Consensus 145 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L 224 (969)
++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++. .+|..
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~---~l~~~---------- 154 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS---RFPVE---------- 154 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC---SCCGG----------
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC---eeCHH----------
Confidence 99999999999998777778889999999999999998888888888888888888888532 22322
Q ss_pred EccCCcccccCchhh---cCCCchhhhhccCCcCCCCCCchhhcCcc--cchhhccCcccc
Q 002085 225 WMTEANLIGEIPEAM---SNLSSLEILALNGNHLEGAIPSGLFLLNN--LTQLFLYDNILS 280 (969)
Q Consensus 225 ~L~~n~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~L~~N~l~ 280 (969)
.| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.+.
T Consensus 155 -------------~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 155 -------------LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp -------------GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred -------------HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 22 33455555555555555433344444444 255566666554
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=4.5e-19 Score=183.16 Aligned_cols=140 Identities=24% Similarity=0.263 Sum_probs=110.4
Q ss_pred CccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCC
Q 002085 396 PSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSL 475 (969)
Q Consensus 396 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 475 (969)
|.....+++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|
T Consensus 27 P~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L 106 (220)
T 2v9t_B 27 PTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 106 (220)
T ss_dssp CSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCC
Confidence 33334567777777788777777778888888888888888887778888888888888888888885555557788888
Q ss_pred CEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCC
Q 002085 476 NNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGN 535 (969)
Q Consensus 476 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~ 535 (969)
+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+..++ |++|+|++|++...
T Consensus 107 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 107 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 8888888888877788888888888888888888866666677774 88888888888653
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=4.1e-19 Score=191.92 Aligned_cols=171 Identities=23% Similarity=0.290 Sum_probs=99.6
Q ss_pred CCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccce
Q 002085 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTL 174 (969)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (969)
.+++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ +| .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 455566666666666532 2 35556666666666666654333 5666666666666666653 22 35666666666
Q ss_pred ecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCc
Q 002085 175 YLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNH 254 (969)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 254 (969)
+|++|++++. ..+..+++|++|++++|++... ..++.+++|+.|++++|++.+..| +..+++|+.|+|++|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~----~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI----TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC----GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc----hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 6666666542 3455666666666666643321 345556666666666666655443 6666667777777776
Q ss_pred CCCCCCchhhcCcccchhhccCccccc
Q 002085 255 LEGAIPSGLFLLNNLTQLFLYDNILSG 281 (969)
Q Consensus 255 l~~~~p~~l~~l~~L~~L~L~~N~l~~ 281 (969)
+++ ++ .+..+++|+.|++++|+++.
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 664 33 36666666666666666653
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2e-21 Score=228.77 Aligned_cols=211 Identities=19% Similarity=0.185 Sum_probs=152.3
Q ss_pred ccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEE-cccccccC
Q 002085 291 KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQ-LYSNRFSG 369 (969)
Q Consensus 291 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~-L~~N~l~~ 369 (969)
+|+.|+|++|+++ .+|..++.+++|+.|++++|.....+|. +....+..+.+|..++++++|+.|+ ++.|.+.
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~----ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL----LMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH----HHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH----HHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 4555566666665 5566666777777777655542111111 1112234455666777788888887 6766553
Q ss_pred CCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCcc
Q 002085 370 ELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLS 449 (969)
Q Consensus 370 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 449 (969)
+|..+.+++|.++...+ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|.|+ .+|..|+.++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred ----------hhhhhhhhcccccccCc----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 56667777777764332 258899999999997 455 888999999999999998 7888999999
Q ss_pred ccchhhccCcccCCCCCcccccccCCCEEEccCccccCCC-CcccccccccceEeccCccccccCCCcccc----cc-cc
Q 002085 450 HLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEI-PKAIGSLLVMVSLDLSGNQFSGEIPPEIGQ----LK-LN 523 (969)
Q Consensus 450 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~----l~-L~ 523 (969)
+|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++.+ |..|+.+++|+.|+|++|+|++..| .+.. ++ |+
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~l~~~lp~L~ 563 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG-IQERLAEMLPSVS 563 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS-CTTHHHHHCTTCS
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc-HHHHHHHHCcccC
Confidence 99999999999985 67 7889999999999999999776 8999999999999999999986544 3322 33 77
Q ss_pred EEEe
Q 002085 524 TFNL 527 (969)
Q Consensus 524 ~l~l 527 (969)
.||+
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 7654
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=9.4e-19 Score=195.57 Aligned_cols=176 Identities=23% Similarity=0.181 Sum_probs=133.8
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcc-cCCCCcEEecCCCCCCCcCCCcccCcccccceeccc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDID-RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (969)
+.+++++|+++ .+|..+. ..+++|+|++|+|++..+..|. .+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888888887 5666554 3577888888888876666676 788888888888888866666777788888888888
Q ss_pred ccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCC
Q 002085 179 NEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGA 258 (969)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 258 (969)
|+|++..+..|.++++|++|+|++| ++.+..|..|.++++|+.|+|++|+|++.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N--------------------------~i~~~~~~~~~~l~~L~~L~L~~N~l~~l 151 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNN--------------------------HIVVVDRNAFEDMAQLQKLYLSQNQISRF 151 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSS--------------------------CCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCC--------------------------cccEECHHHhCCcccCCEEECCCCcCCee
Confidence 8877666666666666666666665 46666778899999999999999999965
Q ss_pred CCchh---hcCcccchhhccCcccccCCCCchhhc---ccccccccCccccc
Q 002085 259 IPSGL---FLLNNLTQLFLYDNILSGEIPSSVEAL---KLTDIDLSMNNLTG 304 (969)
Q Consensus 259 ~p~~l---~~l~~L~~L~L~~N~l~~~~~~~~~~~---~L~~L~Ls~N~l~~ 304 (969)
.+..+ ..+++|+.|+|++|+|++..+..+..+ .++.|+|++|.+..
T Consensus 152 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 152 PVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 44444 569999999999999997766666655 26899999999984
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=4.6e-19 Score=209.88 Aligned_cols=192 Identities=26% Similarity=0.338 Sum_probs=120.3
Q ss_pred CCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhh
Q 002085 242 LSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLG 320 (969)
Q Consensus 242 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 320 (969)
+..+..+.++.+.+++..+ +..+++|+.|++++|.++. ++. +..+ +|+.|+|++|++++..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~~-l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQG-IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CTT-GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-ChH-HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 4467778888888875533 5678888888888888874 333 3333 67777777777775444 66777777777
Q ss_pred hccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCcccc
Q 002085 321 LFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTA 400 (969)
Q Consensus 321 L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 400 (969)
|++|++++ +| .+..+++|+.|+|++|++++ + ..+..+++|+.|+|++|.|+
T Consensus 94 Ls~N~l~~------------------l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~-------- 144 (605)
T 1m9s_A 94 LDENKIKD------------------LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKIT-------- 144 (605)
T ss_dssp CCSSCCCC------------------CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCC--------
T ss_pred CcCCCCCC------------------Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccC--------
Confidence 77777662 12 45666777777777777763 2 34555555555555555554
Q ss_pred ccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEc
Q 002085 401 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL 480 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 480 (969)
+. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++ + +.+..+++|+.|+|
T Consensus 145 --------------~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L 204 (605)
T 1m9s_A 145 --------------DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLEL 204 (605)
T ss_dssp --------------CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEEC
T ss_pred --------------Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEc
Confidence 33 345555666666666666654444 5666666666666666663 2 24566666666666
Q ss_pred cCccccCC
Q 002085 481 ARNELSGE 488 (969)
Q Consensus 481 s~N~l~~~ 488 (969)
++|++++.
T Consensus 205 ~~N~l~~~ 212 (605)
T 1m9s_A 205 FSQECLNK 212 (605)
T ss_dssp CSEEEECC
T ss_pred cCCcCcCC
Confidence 66666643
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.9e-20 Score=220.44 Aligned_cols=214 Identities=19% Similarity=0.164 Sum_probs=134.7
Q ss_pred cCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-cccccc
Q 002085 218 LKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDID 296 (969)
Q Consensus 218 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~ 296 (969)
+++|+.|+|++|.+. .+|+.++++++|+.|++++|......| . .+..+.+.+.+|..+..+ +|+.|+
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~----------~-ll~~~~~~~~~~~~l~~l~~L~~L~ 415 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII----------L-LMRALDPLLYEKETLQYFSTLKAVD 415 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHH----------H-HHHHHCTGGGHHHHHHHHHHHHHHC
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHH----------H-HHHhcccccCCHHHHHHHHhcccCc
Confidence 344444444444443 566667777777777765553210000 0 001112233444444443 355555
Q ss_pred -ccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCccc
Q 002085 297 -LSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGL 375 (969)
Q Consensus 297 -Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 375 (969)
++.|.+ .+|+.+.+++|.++. +|. ..|+.|+|++|+|++ +|. +
T Consensus 416 ~l~~n~~-----------~~L~~l~l~~n~i~~------------------l~~-----~~L~~L~Ls~n~l~~-lp~-~ 459 (567)
T 1dce_A 416 PMRAAYL-----------DDLRSKFLLENSVLK------------------MEY-----ADVRVLHLAHKDLTV-LCH-L 459 (567)
T ss_dssp GGGHHHH-----------HHHHHHHHHHHHHHH------------------HHH-----TTCSEEECTTSCCSS-CCC-G
T ss_pred chhhccc-----------chhhhhhhhcccccc------------------cCc-----cCceEEEecCCCCCC-CcC-c
Confidence 444432 345556666665552 111 248889999999985 665 7
Q ss_pred ccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhh
Q 002085 376 WTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLL 455 (969)
Q Consensus 376 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 455 (969)
..+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .++.+++|+.|+
T Consensus 460 ~~l~~L~~L~Ls~N~l~-----------------------~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~ 514 (567)
T 1dce_A 460 EQLLLVTHLDLSHNRLR-----------------------ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELL 514 (567)
T ss_dssp GGGTTCCEEECCSSCCC-----------------------CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEE
T ss_pred cccccCcEeecCccccc-----------------------ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEE
Confidence 76666655555555444 456677778888888888888885 56 788899999999
Q ss_pred ccCcccCCCC-CcccccccCCCEEEccCccccCCCCcc---cccccccceEec
Q 002085 456 LDGNKLSGKL-PSQIVSWTSLNNLNLARNELSGEIPKA---IGSLLVMVSLDL 504 (969)
Q Consensus 456 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~l 504 (969)
|++|+|++.. |..+..+++|+.|+|++|+|++.+|.. +..+++|+.||+
T Consensus 515 Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999998776 888999999999999999998655432 344788888875
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=6.1e-18 Score=175.85 Aligned_cols=152 Identities=25% Similarity=0.210 Sum_probs=119.3
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (969)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 56888888887 6776554 89999999999999988999999999999999999998666677899999999999999
Q ss_pred cccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCC
Q 002085 180 EFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEG 257 (969)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 257 (969)
+|++..+..|..+++|++|+|++|++. .+|..+..+++|+.|+|++|++.+..+..|..+++|+.|+|++|.+..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~---~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT---ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC---SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc---ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 999877778899999999999988632 456666666666666666666655555555556666666666665553
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=4.2e-18 Score=180.42 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=108.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcE--EEEEEEeccchh---------------------cHHHHHHHHHHHHHHhccc
Q 002085 638 LTESNLIGSGGSGQVYRIDINGAGEF--VAVKRIWNNRKL---------------------NQKLEKEFIAEIEILGTIR 694 (969)
Q Consensus 638 ~~~~~~lG~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~E~~~l~~l~ 694 (969)
|...+.||+|+||.||+|.+..+|+. ||||+++..... .......+.+|++++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999998667888 999987543211 0122346889999999998
Q ss_pred cCce--eeEEEEEEcCCceEEEEeeccC-C----CHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhc-
Q 002085 695 HANI--VKLWCCISSENSKLLVYEYMEN-Q----SLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMH- 766 (969)
Q Consensus 695 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH- 766 (969)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----------------~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----------------LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----------------GGGSCHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----------------cChHHHHHHHHHHHHHHHHHHH
Confidence 8753 444443 357899999943 4 67766432 224567789999999999999
Q ss_pred ccCCCCeEecCCCCCcEEECCCCcEEEeecccceec
Q 002085 767 HDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 802 (969)
Q Consensus 767 ~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 802 (969)
+. +|+||||||+|||++. .++|+|||+|...
T Consensus 189 ~~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 189 EA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 88 9999999999999998 9999999999764
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.3e-18 Score=173.57 Aligned_cols=153 Identities=16% Similarity=0.235 Sum_probs=97.9
Q ss_pred CCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhc
Q 002085 352 GNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFK 431 (969)
Q Consensus 352 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 431 (969)
..+++|+.|++++|.++ .+| .+..+++|+.|++++|.++...+....++|++|++++|++++..+..++.+++|++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 56788999999999998 566 6777888888888877665433333345666666666666665566666666666666
Q ss_pred ccCCccccccCccccCccccchhhccCcc-cCCCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccc
Q 002085 432 ASNNLFSGEIPVELTSLSHLNTLLLDGNK-LSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 432 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
+++|.+++..|..+..+++|+.|+|++|+ ++ .+| .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666665556666666666666666665 44 344 45666666666666666653 33 5566666666666666654
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.9e-18 Score=183.63 Aligned_cols=171 Identities=22% Similarity=0.229 Sum_probs=111.0
Q ss_pred CCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccce
Q 002085 95 DLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTL 174 (969)
Q Consensus 95 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 174 (969)
++.+++.+++++|.+++. + .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 345566666777776633 3 4666777777777777766 344 56677777777777777764333 6677777777
Q ss_pred ecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCc
Q 002085 175 YLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNH 254 (969)
Q Consensus 175 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 254 (969)
+|++|++++ +|... . ++|++|++++|++.. + ..++.+++|+.|++++|++.+. + .+..+++|++|+|++|+
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~---~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD---T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB---S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCC---C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 777777764 33322 2 677777777775332 2 2466667777777777666654 3 57777777777777777
Q ss_pred CCCCCCchhhcCcccchhhccCcccccC
Q 002085 255 LEGAIPSGLFLLNNLTQLFLYDNILSGE 282 (969)
Q Consensus 255 l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 282 (969)
+++. ..+..+++|+.|++++|.+++.
T Consensus 162 i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 162 ITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred Ccch--HHhccCCCCCEEeCCCCcccCC
Confidence 7754 5566777777777777777654
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=6.8e-18 Score=171.18 Aligned_cols=107 Identities=17% Similarity=0.301 Sum_probs=71.5
Q ss_pred cCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccc
Q 002085 94 CDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQT 173 (969)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 173 (969)
+.+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556677777777776 445 4666777777777777554 2235666777777777777776666666777777777
Q ss_pred eecccccccCcCCcccCCCCCcceeecccCC
Q 002085 174 LYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
|+|++|++++..|..++.+++|++|++++|.
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 7777777766666666666666666666663
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=4.7e-18 Score=180.63 Aligned_cols=170 Identities=26% Similarity=0.326 Sum_probs=95.0
Q ss_pred CcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCcc
Q 002085 312 KLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTI 391 (969)
Q Consensus 312 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (969)
.+.++..+++++|.+++ ++ .+..+++|+.|++++|.++ .+| .+..+++|+.|+|++|+|
T Consensus 17 ~l~~l~~l~l~~~~i~~------------------~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i 75 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD------------------LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQI 75 (263)
T ss_dssp HHHHHHHHHHTCSCTTS------------------EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCC
T ss_pred HHHHHHHHHhcCCCccc------------------cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCcc
Confidence 46777888888888773 22 3566788888888888887 455 566667777666666666
Q ss_pred ccccCccccccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCccccc
Q 002085 392 SGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVS 471 (969)
Q Consensus 392 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 471 (969)
++..+....++|++|+|++|++++. |. +.. ++|+.|+|++|++++ ++ .+..
T Consensus 76 ~~~~~l~~l~~L~~L~L~~N~l~~l-------------------------~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~ 126 (263)
T 1xeu_A 76 SDLSPLKDLTKLEELSVNRNRLKNL-------------------------NG-IPS-ACLSRLFLDNNELRD-TD-SLIH 126 (263)
T ss_dssp CCCGGGTTCSSCCEEECCSSCCSCC-------------------------TT-CCC-SSCCEEECCSSCCSB-SG-GGTT
T ss_pred CCChhhccCCCCCEEECCCCccCCc-------------------------Cc-ccc-CcccEEEccCCccCC-Ch-hhcC
Confidence 6444322334455555555555532 21 111 455555555555553 22 3455
Q ss_pred ccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCcccccc-ccEEEeecCcCCCC
Q 002085 472 WTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLK-LNTFNLSSNKLYGN 535 (969)
Q Consensus 472 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-L~~l~ls~N~l~~~ 535 (969)
+++|+.|+|++|+|++ +| .++.+++|+.|+|++|++++. ..+..++ |+.|++++|++++.
T Consensus 127 l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 127 LKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 5555555555555553 22 455555555555555555533 3344442 55555555555543
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=3.4e-18 Score=172.50 Aligned_cols=158 Identities=20% Similarity=0.301 Sum_probs=109.1
Q ss_pred cccCCCccccccCccccccccEEEeeccccCCCccc-ccCCcccchhhcccCCccccccCccccCccccchhhccCcccC
Q 002085 384 LMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQR-GVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLS 462 (969)
Q Consensus 384 L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 462 (969)
+++++|.++ .+|.....++++|+|++|+|++..+. .|..+++|++|++++|+|++..|..|..+++|++|+|++|+|+
T Consensus 13 l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 91 (192)
T 1w8a_A 13 VDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91 (192)
T ss_dssp EECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC
T ss_pred EEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCC
Confidence 334444432 33333334677777777777766654 4778888888888888888777888888888888888888888
Q ss_pred CCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCccccccCCCccccc-c-ccEEEeecCcCCCCCCccc
Q 002085 463 GKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQL-K-LNTFNLSSNKLYGNIPDEF 540 (969)
Q Consensus 463 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~-L~~l~ls~N~l~~~~p~~~ 540 (969)
+..|..|..+++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..+-. .+ . ++...+..+......|..+
T Consensus 92 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~--~~~~~l~~~~~~~~~~~C~~P~~l 169 (192)
T 1w8a_A 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA--WFAEWLRKKSLNGGAARCGAPSKV 169 (192)
T ss_dssp EECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH--HHHHHHHHHCCSGGGCBBCSSTTT
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch--HHHHHHHHcCCCCCCCCCCCChHH
Confidence 777777888888888888888888877888888888888888888888755421 11 1 3333444555555555555
Q ss_pred cccc
Q 002085 541 NNLA 544 (969)
Q Consensus 541 ~~~~ 544 (969)
+...
T Consensus 170 ~~~~ 173 (192)
T 1w8a_A 170 RDVQ 173 (192)
T ss_dssp TTSB
T ss_pred cCCC
Confidence 5443
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=4e-18 Score=207.20 Aligned_cols=177 Identities=20% Similarity=0.246 Sum_probs=87.3
Q ss_pred CCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccc--cccccEEEeeccccCCCcccccCCcc
Q 002085 348 PKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKT--AWNLTRLEISNNRFSGQIQRGVGSWK 425 (969)
Q Consensus 348 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~~L~~L~Ls~N~l~~~~~~~~~~l~ 425 (969)
|..+..++.|+.|+|++|.+. .+|..++.+++|+.|+|++|.|+ .+|... ..+|+.|+|++|+|+ .+|..|++++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 344555555555555555555 45555555556666666666555 444322 245666666666666 5566677777
Q ss_pred cchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccC-CCEEEccCccccCCCCcccccccccceEec
Q 002085 426 NLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTS-LNNLNLARNELSGEIPKAIGSLLVMVSLDL 504 (969)
Q Consensus 426 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 504 (969)
+|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.++|.+|..+ +.|++
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l------~~l~l 366 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER------RFIEI 366 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc------ceeEe
Confidence 7777777777776 56666777777777777777777766666654322 2246677777777766543 44556
Q ss_pred cCc--------cccccCCCcccccc-ccEEEeecCcCCC
Q 002085 505 SGN--------QFSGEIPPEIGQLK-LNTFNLSSNKLYG 534 (969)
Q Consensus 505 s~N--------~l~g~~p~~~~~l~-L~~l~ls~N~l~~ 534 (969)
++| .|.+.++..+..+. +....++.|.+.+
T Consensus 367 ~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 367 NTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -----------------------------------CCCG
T ss_pred ecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 655 33333333334442 4556677777654
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=8.4e-17 Score=162.25 Aligned_cols=126 Identities=25% Similarity=0.331 Sum_probs=83.9
Q ss_pred EEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCc-ccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCC
Q 002085 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPE-FLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154 (969)
Q Consensus 76 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 154 (969)
+.+++++++++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34555566663 45554432 677777777777755543 367777777777777777766677777777777777777
Q ss_pred CCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCC
Q 002085 155 NNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCC
Confidence 77776666667777777777777777776666666666666666666653
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=2.1e-16 Score=155.72 Aligned_cols=135 Identities=21% Similarity=0.212 Sum_probs=102.9
Q ss_pred cccccEEEeeccccC-CCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEE
Q 002085 400 AWNLTRLEISNNRFS-GQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 478 (969)
Q Consensus 400 ~~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 478 (969)
..+|+.|+|++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356788888888887 66777778888888888888888755 677788888888888888887677777778888888
Q ss_pred EccCccccCCC-CcccccccccceEeccCccccccCC---Ccccccc-ccEEEeecCcCCCCCC
Q 002085 479 NLARNELSGEI-PKAIGSLLVMVSLDLSGNQFSGEIP---PEIGQLK-LNTFNLSSNKLYGNIP 537 (969)
Q Consensus 479 ~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~l~-L~~l~ls~N~l~~~~p 537 (969)
+|++|+|++.. +..+..+++|+.|++++|++++..+ ..+..++ |++|++++|.+. .+|
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~ 163 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAP 163 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcc
Confidence 88888887532 2678888888888888888884333 2667674 888888888776 344
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=6.9e-16 Score=153.44 Aligned_cols=112 Identities=21% Similarity=0.200 Sum_probs=66.1
Q ss_pred ccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEc
Q 002085 401 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL 480 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 480 (969)
.+|++|++++|++++..+..+..+++|++|++++|.|++..+..|..+++|+.|+|++|++++..+..+..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 45666666666666555555566666666666666666544445556666666666666666544445555666666666
Q ss_pred cCccccCCCCcccccccccceEeccCcccccc
Q 002085 481 ARNELSGEIPKAIGSLLVMVSLDLSGNQFSGE 512 (969)
Q Consensus 481 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 512 (969)
++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 66666544344445566666666666666543
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.9e-15 Score=150.21 Aligned_cols=129 Identities=24% Similarity=0.298 Sum_probs=98.5
Q ss_pred CCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcc
Q 002085 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDID 142 (969)
Q Consensus 63 c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 142 (969)
|+|.++.|+.. +++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.
T Consensus 7 C~~~~l~~~~~----------~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 73 (177)
T 2o6r_A 7 CSGTEIRCNSK----------GLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD 73 (177)
T ss_dssp EETTEEECCSS----------CCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTT
T ss_pred eCCCEEEecCC----------CCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHcc
Confidence 67777777544 3332 34332 36788999999999877677788889999999999998876666778
Q ss_pred cCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCC
Q 002085 143 RISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 143 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
.+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|.
T Consensus 74 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (177)
T 2o6r_A 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 135 (177)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCC
Confidence 88888889998888887666677888888888888888886665566777777777777774
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=8.1e-16 Score=151.51 Aligned_cols=105 Identities=18% Similarity=0.238 Sum_probs=55.0
Q ss_pred CcccEEEccCCCCC-CCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCccccccee
Q 002085 97 KNLTTIDLSSNSIP-GEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLY 175 (969)
Q Consensus 97 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 175 (969)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45566666666655 55555555556666666666655543 4555555555555555555544554444555555555
Q ss_pred cccccccCcCC-cccCCCCCcceeecccC
Q 002085 176 LYMNEFNGTFP-KEIGDLSNLEVLGLAYN 203 (969)
Q Consensus 176 L~~N~l~~~~p-~~~~~l~~L~~L~L~~N 203 (969)
|++|++++..+ ..+..+++|++|++++|
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N 130 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNC 130 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCC
Confidence 55555553211 33444444444444433
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.1e-15 Score=150.63 Aligned_cols=124 Identities=24% Similarity=0.269 Sum_probs=96.3
Q ss_pred EEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC
Q 002085 77 GISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN 156 (969)
Q Consensus 77 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 156 (969)
.+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4566666665 3555443 57888888888887 677888888888888888888887777788888888888888888
Q ss_pred CCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeecccCC
Q 002085 157 FSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCC
Confidence 887777778888888888888888886666667777777777777774
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=7.2e-16 Score=155.33 Aligned_cols=109 Identities=25% Similarity=0.334 Sum_probs=62.2
Q ss_pred ccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEc
Q 002085 401 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL 480 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 480 (969)
.+|++|+|++|+|+ .+|..|.++++|++|++++|.|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 34556666666665 34455555556666666666665555555555666666666666665554555555556666666
Q ss_pred cCccccCCCCcccccccccceEeccCcccc
Q 002085 481 ARNELSGEIPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 481 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
++|+|++..+..|..+++|+.|+|++|++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666665433444555555555555555554
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.9e-16 Score=150.39 Aligned_cols=124 Identities=19% Similarity=0.243 Sum_probs=58.8
Q ss_pred eEEEEecCCCCC-CCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecC
Q 002085 75 VTGISLRHKDIT-QKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLG 153 (969)
Q Consensus 75 v~~l~l~~~~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 153 (969)
++.|+++++.+. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 445555555554 44444445555555555555555433 344445555555555555544444444445555555555
Q ss_pred CCCCCCc-CCCcccCcccccceecccccccCcCC---cccCCCCCcceeec
Q 002085 154 GNNFSGD-IPRSIGRLSELQTLYLYMNEFNGTFP---KEIGDLSNLEVLGL 200 (969)
Q Consensus 154 ~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L 200 (969)
+|++++. .|..++.+++|++|++++|++++..+ ..++.+++|++|++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 5555431 22444445555555555555543333 23444444444444
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.8e-15 Score=145.65 Aligned_cols=105 Identities=17% Similarity=0.231 Sum_probs=66.6
Q ss_pred CcccEEEccCCCCC-CCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCccccccee
Q 002085 97 KNLTTIDLSSNSIP-GEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLY 175 (969)
Q Consensus 97 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 175 (969)
++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56777777777776 66666667777777777777777644 5566666777777777766655666566666666666
Q ss_pred cccccccCc-CCcccCCCCCcceeecccC
Q 002085 176 LYMNEFNGT-FPKEIGDLSNLEVLGLAYN 203 (969)
Q Consensus 176 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N 203 (969)
+++|++++. .+..++.+++|++|++++|
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N 123 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNC 123 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCC
Confidence 666666642 2244555555555555544
No 385
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=2.7e-16 Score=173.25 Aligned_cols=240 Identities=13% Similarity=0.075 Sum_probs=152.8
Q ss_pred CCcccEEEccCCCCC--CCCCcccCCCCCCCEEeccCCcCCCCCCCCccc--------CCCCcEEecCCCCCCCcCCCcc
Q 002085 96 LKNLTTIDLSSNSIP--GEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDR--------ISGLQCIDLGGNNFSGDIPRSI 165 (969)
Q Consensus 96 l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~--------l~~L~~L~L~~N~l~~~~p~~~ 165 (969)
+++|++|||++|+|. ...+. .++.++.+.+..|.| .+..|.+ +++|+.|+|.+ +++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 455666666666555 11111 111133334433322 2345566 77777777777 6765555667
Q ss_pred cCcccccceecccccccCcCCcccCCCCCcceeecccCCC--CCCCCCCccccccCCCc---------------------
Q 002085 166 GRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSN--FKPAMIPIEFGMLKKLK--------------------- 222 (969)
Q Consensus 166 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~--~~~~~~p~~~~~l~~L~--------------------- 222 (969)
.++++|+.|++++|.++...+..|.++.++..+.+..+.. .........|..+..|+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 7777788888777777766667777777666666554211 01112233344444444
Q ss_pred -----EEEccCCcccccCchhh-cCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccc-c
Q 002085 223 -----TLWMTEANLIGEIPEAM-SNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLT-D 294 (969)
Q Consensus 223 -----~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~-~ 294 (969)
.+.+.++ +.......+ ..+++|+.|+|++|+++...+..|..+.+|+.|+|.+| ++.+.+..|... +|+ .
T Consensus 201 ~~~~~~l~~~~~-l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 201 PRDINFLTIEGK-LDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp GGGCSEEEEEEC-CCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccceEEEeee-ecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 2222221 111001111 13788999999999998666677888999999999998 777777888877 598 9
Q ss_pred ccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEc
Q 002085 295 IDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQL 362 (969)
Q Consensus 295 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L 362 (969)
+++.+ +++...+.+|.++++|+.+++++|+++. .-+..|.++++|+.++.
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~-----------------I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITT-----------------LGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCE-----------------ECTTTTCTTCCCCEEEC
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCc-----------------cchhhhcCCcchhhhcc
Confidence 99988 7877778899999999999999988872 22346888888888763
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=3.7e-15 Score=163.28 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=100.5
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchh--------------c-H----HHHHHHHHHHHHHhccccCce
Q 002085 638 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKL--------------N-Q----KLEKEFIAEIEILGTIRHANI 698 (969)
Q Consensus 638 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------------~-~----~~~~~~~~E~~~l~~l~h~ni 698 (969)
|++.+.||+|+||.||+|... +|+.||||+++..... . . ........|...+.++.+..+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 788999999999999999885 6899999987532110 0 0 011123457777777755443
Q ss_pred --eeEEEEEEcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEec
Q 002085 699 --VKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHR 776 (969)
Q Consensus 699 --v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 776 (969)
...+++ ...+|||||++|++|.++.. ......++.|++.+|.|||+. |||||
T Consensus 176 ~vp~p~~~----~~~~LVME~i~G~~L~~l~~-------------------~~~~~~l~~qll~~l~~lH~~---gIVHr 229 (397)
T 4gyi_A 176 PVPEPIAQ----SRHTIVMSLVDALPMRQVSS-------------------VPDPASLYADLIALILRLAKH---GLIHG 229 (397)
T ss_dssp SCCCEEEE----ETTEEEEECCSCEEGGGCCC-------------------CSCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCeeeec----cCceEEEEecCCccHhhhcc-------------------cHHHHHHHHHHHHHHHHHHHC---CCcCC
Confidence 222322 23479999999988865432 123457889999999999988 99999
Q ss_pred CCCCCcEEECCCC----------cEEEeecccceec
Q 002085 777 DVKSSNILLDSEF----------KAKIADFGLAKML 802 (969)
Q Consensus 777 Dlkp~Nill~~~~----------~~kl~Dfgla~~~ 802 (969)
||||.|||+++++ .+.|+||+-+...
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9999999998876 3899999987643
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=4.7e-15 Score=163.34 Aligned_cols=238 Identities=13% Similarity=0.006 Sum_probs=173.7
Q ss_pred CCCeEEEEecCCCCC--CCCCccccCCCcccEEEccCCCCCCCCCcccCC--------CCCCCEEeccCCcCCCCCCCCc
Q 002085 72 FNSVTGISLRHKDIT--QKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYN--------CTKLQNLDLSQNYFVGPIPSDI 141 (969)
Q Consensus 72 ~~~v~~l~l~~~~l~--~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~l 141 (969)
..+++.|||+++.+. ...+..+ +.+..+++..|.|. +.+|.+ +++|+.|+|++ .++.+-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 457999999999987 2222222 23555666666332 345666 89999999988 7776667788
Q ss_pred ccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccc----cCcCCcccCCCCCcc-eeec----------------
Q 002085 142 DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEF----NGTFPKEIGDLSNLE-VLGL---------------- 200 (969)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~~~~l~~L~-~L~L---------------- 200 (969)
.++++|+.|+|++|.+....+..|.++.++..+.+..+.. .......|.++..|+ .+.+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 8899999999999988867777888888888777765322 222333454445554 3333
Q ss_pred ---------ccCCCCCCCCCCcc-ccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccc
Q 002085 201 ---------AYNSNFKPAMIPIE-FGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLT 270 (969)
Q Consensus 201 ---------~~N~~~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 270 (969)
.++- ....... ...+++|+.|+|++|++....+.+|.++++|+.|+|.+| ++...+.+|..+.+|+
T Consensus 201 ~~~~~~l~~~~~l---~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 201 PRDINFLTIEGKL---DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp GGGCSEEEEEECC---CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccccceEEEeeee---cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 2220 0000000 113789999999999998888889999999999999998 8767777888999999
Q ss_pred -hhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhh
Q 002085 271 -QLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGL 321 (969)
Q Consensus 271 -~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 321 (969)
.+++.+ .++.+.+..|... +|+.|++++|+++...+.+|.++++|+.++.
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999998 7887778888876 7999999999999888889999999998753
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=4.2e-15 Score=147.56 Aligned_cols=127 Identities=18% Similarity=0.184 Sum_probs=76.0
Q ss_pred ccccEEEeeccccCCCcccccCCcc-cchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEE
Q 002085 401 WNLTRLEISNNRFSGQIQRGVGSWK-NLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLN 479 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 479 (969)
.+|+.|++++|+++.. +. +..+. +|++|++++|.|++. ..|..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 3455555555555532 32 33333 666666666666643 4566666677777777776643333346666777777
Q ss_pred ccCccccCCCCc--ccccccccceEeccCccccccCCCc----ccccc-ccEEEeecCcCC
Q 002085 480 LARNELSGEIPK--AIGSLLVMVSLDLSGNQFSGEIPPE----IGQLK-LNTFNLSSNKLY 533 (969)
Q Consensus 480 Ls~N~l~~~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~----~~~l~-L~~l~ls~N~l~ 533 (969)
|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. ++.++ |++||+++|...
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777764 4554 5666677777777777776 45553 55553 677777766553
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=7.5e-15 Score=145.71 Aligned_cols=134 Identities=20% Similarity=0.206 Sum_probs=102.9
Q ss_pred CCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhh
Q 002085 351 LGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVF 430 (969)
Q Consensus 351 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 430 (969)
+.++.+|+.|++++|+++ .+|. +..+. ++|++|+|++|.|++. ..+..+++|++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~---------------------~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L 69 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATL---------------------DQFDAIDFSDNEIRKL--DGFPLLRRLKTL 69 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGT---------------------TCCSEEECCSSCCCEE--CCCCCCSSCCEE
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcC---------------------CCCCEEECCCCCCCcc--cccccCCCCCEE
Confidence 455667777777777776 3333 22222 2455666666666654 567788899999
Q ss_pred cccCCccccccCccccCccccchhhccCcccCCCCCc--ccccccCCCEEEccCccccCCCCcc----cccccccceEec
Q 002085 431 KASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPS--QIVSWTSLNNLNLARNELSGEIPKA----IGSLLVMVSLDL 504 (969)
Q Consensus 431 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l 504 (969)
++++|.|++..+..|..+++|++|+|++|+++ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.||+
T Consensus 70 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 70 LVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp ECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred ECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 99999998665566689999999999999997 5676 7889999999999999998 56774 899999999999
Q ss_pred cCccccc
Q 002085 505 SGNQFSG 511 (969)
Q Consensus 505 s~N~l~g 511 (969)
++|.+..
T Consensus 148 ~~n~~~~ 154 (176)
T 1a9n_A 148 QKVKLKE 154 (176)
T ss_dssp EECCHHH
T ss_pred CcCCHHH
Confidence 9999863
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=1.2e-16 Score=162.00 Aligned_cols=135 Identities=21% Similarity=0.285 Sum_probs=89.6
Q ss_pred cCCCcccEEEccCCCCCCCCCc------ccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccC
Q 002085 94 CDLKNLTTIDLSSNSIPGEFPE------FLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGR 167 (969)
Q Consensus 94 ~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 167 (969)
.....++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+..+++|++|+|++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445566666666666666555 77777778888888777775 56 7777777888888888777 56777777
Q ss_pred cccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCC--ccccccCCCcEEEccCCcccccCc
Q 002085 168 LSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIP--IEFGMLKKLKTLWMTEANLIGEIP 236 (969)
Q Consensus 168 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p 236 (969)
+++|++|+|++|++++ +| .++.+++|++|++++|++.. ++ ..+..+++|+.|++++|.+.+.+|
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~---~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN---WGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC---HHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc---hhHHHHHhcCCCCCEEEecCCccccccc
Confidence 7778888888887775 34 56677777777777775321 12 245555555555555555555444
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=3e-13 Score=152.79 Aligned_cols=330 Identities=10% Similarity=0.041 Sum_probs=162.4
Q ss_pred CcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCC
Q 002085 114 PEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLS 193 (969)
Q Consensus 114 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 193 (969)
..+|.++++|+.+.|..+ ++.+-..+|.++++|+.++|.++ ++..-...|.++++|+.+.+..+ +.......|.+..
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 344555555555555432 44333445555555555555433 33233345555556655555433 2323444454443
Q ss_pred CcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhh
Q 002085 194 NLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLF 273 (969)
Q Consensus 194 ~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 273 (969)
.++....... ...-...|.++++|+.+.+.++ +......+|.++.+|+.+++..| ++......+..+..|+.+.
T Consensus 141 ~~~~~~~~~~----~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 141 FKEITIPEGV----TVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CSEEECCTTC----CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred ccccccCccc----cccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 3332222211 1112234555566666665432 33334456667777777776655 4334444555666666666
Q ss_pred ccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCC
Q 002085 274 LYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGN 353 (969)
Q Consensus 274 L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~ 353 (969)
+..+... .....+...+|+.+.+..+ ++......|..
T Consensus 215 ~~~~~~~-i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~----------------------------------------- 251 (394)
T 4fs7_A 215 FPNSLYY-LGDFALSKTGVKNIIIPDS-FTELGKSVFYG----------------------------------------- 251 (394)
T ss_dssp CCTTCCE-ECTTTTTTCCCCEEEECTT-CCEECSSTTTT-----------------------------------------
T ss_pred cCCCceE-eehhhcccCCCceEEECCC-ceecccccccc-----------------------------------------
Confidence 5554332 1122222223444443322 12122233444
Q ss_pred CccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCcccchhhccc
Q 002085 354 CRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKNLIVFKAS 433 (969)
Q Consensus 354 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 433 (969)
+..|+.+.+..+... .....|..+..++.+....+.+. ........+|+.+.+..+ ++.+....|.++.+|+.+++.
T Consensus 252 ~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~-~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 252 CTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP-EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp CSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC-TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cccceeEEcCCCcce-eeccccccccccceeccCceeec-cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 444444444443322 22333333444444443333221 111112245555555443 444455667777777777776
Q ss_pred CCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCcccccccccceE
Q 002085 434 NNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSL 502 (969)
Q Consensus 434 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 502 (969)
++ ++.+-..+|.++.+|+.+++..| ++..-...|.+|++|+.+++..| ++ .+..+|.+.++|+.+
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 44 55455667777777777777666 55444556777777777777654 33 344566666666653
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=4.7e-16 Score=157.74 Aligned_cols=136 Identities=20% Similarity=0.250 Sum_probs=74.3
Q ss_pred CCccCcEEEcccccccCCCCc------ccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccccCCccc
Q 002085 353 NCRTLRTVQLYSNRFSGELPT------GLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRGVGSWKN 426 (969)
Q Consensus 353 ~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 426 (969)
....++.++++.|.++|..|. .+..+++|+.|+|++|.+++ + | .+..+++
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l----------------------~-~~~~l~~ 71 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-I----------------------S-SLSGMEN 71 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-C----------------------C-CHHHHTT
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-c----------------------c-ccccCCC
Confidence 344566666666666666555 56666666655555555553 2 2 4444444
Q ss_pred chhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCC-cccccccccceEecc
Q 002085 427 LIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIP-KAIGSLLVMVSLDLS 505 (969)
Q Consensus 427 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls 505 (969)
|++|++++|.|+ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|+++
T Consensus 72 L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 72 LRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp CCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEEC
T ss_pred CCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEec
Confidence 555555555554 344444555556666666666553 33 45555566666666666653211 245556666666666
Q ss_pred CccccccCCC
Q 002085 506 GNQFSGEIPP 515 (969)
Q Consensus 506 ~N~l~g~~p~ 515 (969)
+|++++.+|.
T Consensus 149 ~N~l~~~~~~ 158 (198)
T 1ds9_A 149 GNPLYNDYKE 158 (198)
T ss_dssp SCHHHHHHHT
T ss_pred CCcccccccc
Confidence 6666555443
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.45 E-value=4.2e-13 Score=150.94 Aligned_cols=213 Identities=15% Similarity=0.108 Sum_probs=93.2
Q ss_pred CcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceec
Q 002085 97 KNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYL 176 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 176 (969)
..++.+.+.+ +++..-..+|.++ +|+.++|..| ++.+-..+|.+ .+|+.+.|.+ .++..-+..|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3444444432 2332333344442 4555554443 33333334444 2355555543 333333344445555555555
Q ss_pred ccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCC
Q 002085 177 YMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLE 256 (969)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 256 (969)
++|+++......|. .++|+.+.+..+ ...+-...|.++++|+.+.+.+ ++...-..+|.+ .+|+.+.| .|.++
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~---l~~I~~~aF~~~~~L~~l~l~~-~l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT---LKEIGSQAFLKTSQLKTIEIPE-NVSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT---CCEECTTTTTTCTTCCCEECCT-TCCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc---hheehhhHhhCCCCCCEEecCC-CccCcccccccc-CCccEEEe-CCCcc
Confidence 55555433333333 345555555433 2222333444555555555543 233333334444 44555555 23333
Q ss_pred CCCCchhhcCcccchhhccCcccc-----cCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhc
Q 002085 257 GAIPSGLFLLNNLTQLFLYDNILS-----GEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLF 322 (969)
Q Consensus 257 ~~~p~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 322 (969)
......|..+++|+.+++.+|.+. ...+..|... +|+.++|. +.++.....+|.++++|+.+.|.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEEC
Confidence 333444445555555555544443 2333334333 45555555 23444444555555555555553
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=4.1e-13 Score=132.51 Aligned_cols=114 Identities=21% Similarity=0.342 Sum_probs=70.6
Q ss_pred CCCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCc
Q 002085 62 PCDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI 141 (969)
Q Consensus 62 ~c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 141 (969)
.|. .++.|. .+.++++++++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|
T Consensus 5 ~CP-~~C~C~---~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 77 (174)
T 2r9u_A 5 GCP-SQCSCD---QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVF 77 (174)
T ss_dssp SSC-TTSEEC---SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCC-CCCEEC---CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHh
Confidence 354 456674 245666666663 4555443 566677777777766666666666666666666666665444455
Q ss_pred ccCCCCcEEecCCCCCCCcCCCcccCcccccceeccccccc
Q 002085 142 DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182 (969)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 182 (969)
..+++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 78 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 78 DKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 66666666666666666444444666666666666666665
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=3.2e-13 Score=132.84 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=71.4
Q ss_pred EEEEecCCCCCCCCCccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCC
Q 002085 76 TGISLRHKDITQKIPPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGN 155 (969)
Q Consensus 76 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 155 (969)
+.+++++++++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345666666654 454442 66777777777777666777777777777777777777665656677777777777777
Q ss_pred CCCCcCCCcccCcccccceecccccccC
Q 002085 156 NFSGDIPRSIGRLSELQTLYLYMNEFNG 183 (969)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 183 (969)
+|++..+..|.++++|++|+|++|.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 7775555567777777777777777663
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.45 E-value=3.8e-13 Score=151.24 Aligned_cols=262 Identities=10% Similarity=0.023 Sum_probs=138.9
Q ss_pred CCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccccccCcCCcccCCCCCcceeec
Q 002085 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGL 200 (969)
Q Consensus 121 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 200 (969)
..++.+.+.+ .++.+-..+|.+. +|+.++|..| ++..-..+|.+. +|+.+.+.+ .++.+.+..|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 5555555543 2343444555553 5666666555 543444455553 566666654 455455566666666666666
Q ss_pred ccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhhccCCcCCCCCCchhhcCcccchhhccCcccc
Q 002085 201 AYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILS 280 (969)
Q Consensus 201 ~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 280 (969)
+.|++ ..++...-...+|+.+.|.+ ++...-..+|.++++|+.++|..| ++.....+|.. .+|+.+.| .|.++
T Consensus 188 ~~n~l---~~I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 188 SKTKI---TKLPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp TTSCC---SEECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred CCCcc---eEechhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 66532 22333222246666666653 354445556666666666666654 44333334444 56666666 34455
Q ss_pred cCCCCchhhc-ccccccccCcccc-----ccCCccccCcccchhhhhccccCcCcCCcccccccccCcccccCCCCCCCC
Q 002085 281 GEIPSSVEAL-KLTDIDLSMNNLT-----GSIPEEFGKLKNLQLLGLFSNHLSGEVPASIGVVAFENNLSGAVPKSLGNC 354 (969)
Q Consensus 281 ~~~~~~~~~~-~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l 354 (969)
......|... +|+.+++.+|.+. ...+.+|.++++|+.++|.+ .+.. .-..+|.+|
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~-----------------I~~~aF~~c 322 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRI-----------------LGQGLLGGN 322 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCE-----------------ECTTTTTTC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEE-----------------EhhhhhcCC
Confidence 4445555544 5666666665554 34455666666666666652 2331 112345566
Q ss_pred ccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCcc---ccccccEEEeeccccC
Q 002085 355 RTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSK---TAWNLTRLEISNNRFS 414 (969)
Q Consensus 355 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~~L~~L~Ls~N~l~ 414 (969)
++|+.++|..| ++...+..|..+ +|+.+++++|.+....... ...+++.|++..+.+.
T Consensus 323 ~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 323 RKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66666666443 443444555555 6666666666554322221 1134566666655543
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=4e-13 Score=132.19 Aligned_cols=103 Identities=26% Similarity=0.272 Sum_probs=89.1
Q ss_pred ccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceeccc
Q 002085 99 LTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178 (969)
Q Consensus 99 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (969)
.++|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999998 5776664 8899999999999988888899999999999999999977777788999999999999
Q ss_pred ccccCcCCcccCCCCCcceeecccCC
Q 002085 179 NEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
|+|++..+..|..+++|++|+|++|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~ 113 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNP 113 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCC
Confidence 99997777778888888888888885
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=7.1e-13 Score=130.81 Aligned_cols=102 Identities=21% Similarity=0.215 Sum_probs=84.6
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceecccc
Q 002085 100 TTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMN 179 (969)
Q Consensus 100 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 179 (969)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68899999986 6777664 88899999999998888888889999999999999998665666788888999999999
Q ss_pred cccCcCCcccCCCCCcceeecccCC
Q 002085 180 EFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
+|++..+..|..+++|++|+|++|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~ 116 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNP 116 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSC
T ss_pred ccceeCHHHhccccCCCEEEeCCCC
Confidence 8886666668888888888888775
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.40 E-value=1.8e-12 Score=146.46 Aligned_cols=329 Identities=13% Similarity=0.021 Sum_probs=225.5
Q ss_pred CccccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcc
Q 002085 90 PPIICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLS 169 (969)
Q Consensus 90 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 169 (969)
..+|.++++|+.+.|.. .++..-..+|.++++|+.++|..+ ++..-...|.++.+|+.+.+..+ +.......|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 45788999999999975 477566778999999999999865 55455678999999999888765 4435556777765
Q ss_pred cccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCCchhhhh
Q 002085 170 ELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLSSLEILA 249 (969)
Q Consensus 170 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 249 (969)
.+........ .......|.++++|+.+.+..+ ....-...|.++.+|+.+.+..+ +......+|.++..|+.+.
T Consensus 141 ~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~---~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 141 FKEITIPEGV--TVIGDEAFATCESLEYVSLPDS---METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CSEEECCTTC--CEECTTTTTTCTTCCEEECCTT---CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred ccccccCccc--cccchhhhcccCCCcEEecCCc---cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 5444433333 3245578999999999999866 33445567899999999999765 5555567899999999998
Q ss_pred ccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhc-ccccccccCccccccCCccccCcccchhhhhccccCcC
Q 002085 250 LNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEAL-KLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFSNHLSG 328 (969)
Q Consensus 250 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 328 (969)
+..+... +.+......+|+.+.+..+ ++......+... .++.+.+..+... .....|..+..++.+.+..+.+.
T Consensus 215 ~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~- 289 (394)
T 4fs7_A 215 FPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP- 289 (394)
T ss_dssp CCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC-
T ss_pred cCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec-
Confidence 8877553 2344455678888877644 333334444443 6888888777554 56667777877777666544322
Q ss_pred cCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccccccCccccccccEEEe
Q 002085 329 EVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEI 408 (969)
Q Consensus 329 ~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~L 408 (969)
...+..+.+|+.+.+.++ ++......|..+.+|+.++|.++
T Consensus 290 -------------------~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~------------------- 330 (394)
T 4fs7_A 290 -------------------EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL------------------- 330 (394)
T ss_dssp -------------------TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-------------------
T ss_pred -------------------cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-------------------
Confidence 134667778888887654 44333445555666665555332
Q ss_pred eccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEE
Q 002085 409 SNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNL 478 (969)
Q Consensus 409 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 478 (969)
++.+...+|.++.+|+.+++..| ++.+-..+|.++.+|+.+++..| ++ .+...|.++++|+.+
T Consensus 331 ----v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 331 ----VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp ----CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ----ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 33344566777788888888766 66566677888888888888765 33 345567777777654
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=2.7e-12 Score=142.40 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=72.3
Q ss_pred CCCCcceeeCCCeEEEEecCCCCCCCCCccccCCCcccEEEccC-CCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCc
Q 002085 63 CDWPEITCTFNSVTGISLRHKDITQKIPPIICDLKNLTTIDLSS-NSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDI 141 (969)
Q Consensus 63 c~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 141 (969)
|.|..|.|+.. ++|+. +|. |..+++|++|+|++ |.|++..+..|.+|++|++|+|++|+|++..|..|
T Consensus 8 C~~~~v~~~~~---------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 76 (347)
T 2ifg_A 8 HGSSGLRCTRD---------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76 (347)
T ss_dssp SSSSCEECCSS---------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGG
T ss_pred ccCCEEEcCCC---------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHh
Confidence 77777766532 14443 566 77777777777775 77776666777777777777777777777667777
Q ss_pred ccCCCCcEEecCCCCCCCcCCCcccCcccccceeccccccc
Q 002085 142 DRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYMNEFN 182 (969)
Q Consensus 142 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 182 (969)
.+|++|++|+|++|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 77 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 77 HFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 7777777777777777754444444444 666666666655
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=2.7e-14 Score=159.03 Aligned_cols=165 Identities=18% Similarity=0.145 Sum_probs=111.0
Q ss_pred CccCcEEEcccccccCCCCcccccc-----cCCCccccCCCccccccCccc---cccccEEEeeccccCCCcccccC---
Q 002085 354 CRTLRTVQLYSNRFSGELPTGLWTT-----FNLSSLMLSDNTISGELPSKT---AWNLTRLEISNNRFSGQIQRGVG--- 422 (969)
Q Consensus 354 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~---~~~L~~L~Ls~N~l~~~~~~~~~--- 422 (969)
++.|+.|+|++|.++......+... .+|+.|+|++|.|+....... ..+|+.|+|++|+|++.....+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4578999999999985544444443 588888898888864332222 24688888888888755444442
Q ss_pred --CcccchhhcccCCccccc----cCccccCccccchhhccCcccCCC----CCcccccccCCCEEEccCccccCC----
Q 002085 423 --SWKNLIVFKASNNLFSGE----IPVELTSLSHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNLARNELSGE---- 488 (969)
Q Consensus 423 --~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 488 (969)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|+|++. ++..+..+++|+.|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 346788888888887642 444556677788888888887642 245566667788888888887642
Q ss_pred CCcccccccccceEeccCccccccCCCccc
Q 002085 489 IPKAIGSLLVMVSLDLSGNQFSGEIPPEIG 518 (969)
Q Consensus 489 ~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 518 (969)
++..+...++|++|||++|.|++.....+.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 334455567788888888887754444443
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=4.7e-14 Score=157.15 Aligned_cols=160 Identities=14% Similarity=0.126 Sum_probs=77.1
Q ss_pred CcccEEEccCCCCCCCCCcccCC-----CCCCCEEeccCCcCCCCCCCCc-ccCCCCcEEecCCCCCCCcCCCcc-----
Q 002085 97 KNLTTIDLSSNSIPGEFPEFLYN-----CTKLQNLDLSQNYFVGPIPSDI-DRISGLQCIDLGGNNFSGDIPRSI----- 165 (969)
Q Consensus 97 ~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~----- 165 (969)
+.|++|+|++|.|+......+.. .++|++|+|++|.+++.....+ ..+.+|++|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45666677766666433222222 2566666666666653222222 234566666666666654333332
Q ss_pred cCcccccceecccccccCc----CCcccCCCCCcceeecccCCCCCCC--CCCccccccCCCcEEEccCCccccc----C
Q 002085 166 GRLSELQTLYLYMNEFNGT----FPKEIGDLSNLEVLGLAYNSNFKPA--MIPIEFGMLKKLKTLWMTEANLIGE----I 235 (969)
Q Consensus 166 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~~~~~~--~~p~~~~~l~~L~~L~L~~n~l~~~----~ 235 (969)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.+...+ .++..+...++|++|+|++|++... +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2345566666666666532 2233345556666666666422111 1122333444444444444444332 2
Q ss_pred chhhcCCCchhhhhccCCcCC
Q 002085 236 PEAMSNLSSLEILALNGNHLE 256 (969)
Q Consensus 236 p~~~~~l~~L~~L~L~~N~l~ 256 (969)
+..+...++|++|+|++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 223333444555555555544
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.9e-11 Score=135.47 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=86.2
Q ss_pred EEEccCC-CCCCCCCcccCCCCCCCEEeccC-CcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccccceeccc
Q 002085 101 TIDLSSN-SIPGEFPEFLYNCTKLQNLDLSQ-NYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSELQTLYLYM 178 (969)
Q Consensus 101 ~L~L~~n-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 178 (969)
.++++++ +|+ .+|. |..+++|++|+|++ |+|++..+..|.+|++|++|+|++|+|++..|..|++|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688887 888 5788 99999999999996 999977778899999999999999999988888899999999999999
Q ss_pred ccccCcCCcccCCCCCcceeecccCC
Q 002085 179 NEFNGTFPKEIGDLSNLEVLGLAYNS 204 (969)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~ 204 (969)
|+|++..+..|..++ |+.|+|++|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~ 114 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNP 114 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCC
Confidence 999976666666655 8888888775
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.15 E-value=8.7e-11 Score=124.58 Aligned_cols=146 Identities=12% Similarity=0.036 Sum_probs=112.4
Q ss_pred hhccCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCCce
Q 002085 633 NILSSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSK 711 (969)
Q Consensus 633 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 711 (969)
..+..|+....++.|+.+.||++... ++.+++|+....... ....+.+|+++++.+. +..+.++++++.+.+..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 34567888888899999999998753 678999988542111 1245889999999884 67788999999888899
Q ss_pred EEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC----------------------
Q 002085 712 LLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC---------------------- 769 (969)
Q Consensus 712 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------- 769 (969)
|+||||++|.+|.+.... ......++.+++.+++.||+..
T Consensus 86 ~lv~e~i~G~~l~~~~~~------------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYED------------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN 147 (263)
T ss_dssp EEEEECCSSEEHHHHCCT------------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred EEEEEecCCeehhhccCC------------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHh
Confidence 999999999999876321 1123467888899999999710
Q ss_pred ----------------------------------CCCeEecCCCCCcEEECCCCcEEEeeccccee
Q 002085 770 ----------------------------------TPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 801 (969)
Q Consensus 770 ----------------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 801 (969)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14699999999999998765667999998753
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.14 E-value=3.9e-10 Score=127.19 Aligned_cols=89 Identities=11% Similarity=0.109 Sum_probs=40.8
Q ss_pred CcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccCccccCCCCccccc
Q 002085 416 QIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLARNELSGEIPKAIGS 495 (969)
Q Consensus 416 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 495 (969)
+....|.++.+|+.+++.++ ++.+-...|.++.+|+.+.|..+ ++..-...|.+|++|+.+++.+|.... ..+..
T Consensus 302 I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~ 376 (394)
T 4gt6_A 302 LPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAIST 376 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBC
T ss_pred cCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhc
Confidence 33445555555665555543 44344455666666666666433 442333455666666666666554431 33444
Q ss_pred ccccceEeccCccc
Q 002085 496 LLVMVSLDLSGNQF 509 (969)
Q Consensus 496 l~~L~~L~ls~N~l 509 (969)
..+|+.+.+..|.+
T Consensus 377 ~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 377 DSGLQNLPVAPGSI 390 (394)
T ss_dssp CCCC----------
T ss_pred cCCCCEEEeCCCCE
Confidence 55555555554443
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.07 E-value=1.1e-09 Score=123.60 Aligned_cols=81 Identities=14% Similarity=0.216 Sum_probs=48.4
Q ss_pred ccccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEc
Q 002085 401 WNLTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNL 480 (969)
Q Consensus 401 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 480 (969)
.+|+.++|..+ ++.+....|.++.+|+.+.+..+ ++.+-...|.++.+|+.+++.+|.... ..+..+.+|+.+.+
T Consensus 311 ~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i 385 (394)
T 4gt6_A 311 ISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPV 385 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----
T ss_pred CCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEe
Confidence 35555665543 44455667888888888888654 554566788888888888888876541 45677788888888
Q ss_pred cCcccc
Q 002085 481 ARNELS 486 (969)
Q Consensus 481 s~N~l~ 486 (969)
..|.+.
T Consensus 386 ~~~~~~ 391 (394)
T 4gt6_A 386 APGSID 391 (394)
T ss_dssp ------
T ss_pred CCCCEE
Confidence 777653
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.99 E-value=6.4e-10 Score=117.73 Aligned_cols=138 Identities=14% Similarity=0.084 Sum_probs=95.5
Q ss_pred cCCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCc--eeeEEEEEEcCCceEE
Q 002085 636 SSLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN--IVKLWCCISSENSKLL 713 (969)
Q Consensus 636 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~l 713 (969)
..+....+.+.|..+.||++.. .+|+.+++|+..... ...+.+|+++++.+.+.+ +.+++++..+++..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 3444433334566699999865 357789999875431 245778999999886444 5668888888888999
Q ss_pred EEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC------------------------
Q 002085 714 VYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC------------------------ 769 (969)
Q Consensus 714 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------ 769 (969)
||||++|.++. ... . ....++.+++..++.||+..
T Consensus 93 v~e~i~G~~l~--~~~----------------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH----------------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEECCSSEETT--TSC----------------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred EEEecCCcccC--cCc----------------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 99999998874 111 0 11244555555566665431
Q ss_pred -------------------------------CCCeEecCCCCCcEEECCCCcEEEeeccccee
Q 002085 770 -------------------------------TPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 801 (969)
Q Consensus 770 -------------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 801 (969)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12499999999999998776677999998754
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=1.6e-10 Score=127.42 Aligned_cols=205 Identities=16% Similarity=0.162 Sum_probs=102.9
Q ss_pred CCeEEEEecCCCCCC-CC-------CccccCCCcccEEEccCCCCC---------CCCCcccCCCCCCCEEeccCCcCCC
Q 002085 73 NSVTGISLRHKDITQ-KI-------PPIICDLKNLTTIDLSSNSIP---------GEFPEFLYNCTKLQNLDLSQNYFVG 135 (969)
Q Consensus 73 ~~v~~l~l~~~~l~~-~~-------~~~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~ 135 (969)
.+|+.|.+......+ .. ..++..+++|+.|.+.++... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457888887655442 21 334556778888877664331 123333455566666666655211
Q ss_pred CCCCCcccCCCCcEEecCCCCCCCcCCCccc--Ccccccceeccc--ccccCcCCcccCCCCCcceeecccCCCCCCCCC
Q 002085 136 PIPSDIDRISGLQCIDLGGNNFSGDIPRSIG--RLSELQTLYLYM--NEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMI 211 (969)
Q Consensus 136 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~ 211 (969)
.++. + .+++|++|+|..|.+.......+. .+++|++|+|+. |...+.. . ...+
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~-------------------~~~l 242 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--D-------------------MNVF 242 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--C-------------------GGGT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--h-------------------HHHH
Confidence 1222 2 245555555555554432222222 345555555432 1110000 0 0000
Q ss_pred Cccc--cccCCCcEEEccCCcccccCchhhc---CCCchhhhhccCCcCCCC----CCchhhcCcccchhhccCcccccC
Q 002085 212 PIEF--GMLKKLKTLWMTEANLIGEIPEAMS---NLSSLEILALNGNHLEGA----IPSGLFLLNNLTQLFLYDNILSGE 282 (969)
Q Consensus 212 p~~~--~~l~~L~~L~L~~n~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~ 282 (969)
...+ ..+++|+.|+|.+|.+....+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++..
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 0111 2356777777777766654444443 467788888888887753 233334567778888877776633
Q ss_pred CCCchhhcccccccccCcc
Q 002085 283 IPSSVEALKLTDIDLSMNN 301 (969)
Q Consensus 283 ~~~~~~~~~L~~L~Ls~N~ 301 (969)
.-..+...-...++++.++
T Consensus 323 ~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHCCSEEECCSBC
T ss_pred HHHHHHHHcCCEEEecCCc
Confidence 2222222112345666665
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.89 E-value=2.8e-09 Score=118.49 Aligned_cols=143 Identities=13% Similarity=0.191 Sum_probs=105.4
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEEe--ccchhcHHHHHHHHHHHHHHhccc--cCceeeEEEEEEcC---CceE
Q 002085 640 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIW--NNRKLNQKLEKEFIAEIEILGTIR--HANIVKLWCCISSE---NSKL 712 (969)
Q Consensus 640 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~ 712 (969)
..+.++.|.++.||++... +..+++|+.. .... ......+.+|+++++.+. +..+.+++.++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 3567899999999998764 4678999764 2211 122357889999999996 45688899888776 5589
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC-----------------------
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC----------------------- 769 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------- 769 (969)
+||||++|..+.+... ..++...+..++.+++..|+.||...
T Consensus 118 ~vme~v~G~~l~~~~~---------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL---------------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERW 182 (359)
T ss_dssp EEEECCCCBCCCCTTC---------------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHH
T ss_pred EEEEecCCeecCCCcc---------------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHH
Confidence 9999999876643111 12567778889999999999999630
Q ss_pred --------------------------------CCCeEecCCCCCcEEECCCCc--EEEeeccccee
Q 002085 770 --------------------------------TPQIIHRDVKSSNILLDSEFK--AKIADFGLAKM 801 (969)
Q Consensus 770 --------------------------------~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgla~~ 801 (969)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 183 TKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999875
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=3.2e-10 Score=124.94 Aligned_cols=181 Identities=13% Similarity=0.112 Sum_probs=104.4
Q ss_pred CCCCCccCcEEEccccccc---------CCCCcccccccCCCccccCCCccccccCccccccccEEEeeccccCCCcccc
Q 002085 350 SLGNCRTLRTVQLYSNRFS---------GELPTGLWTTFNLSSLMLSDNTISGELPSKTAWNLTRLEISNNRFSGQIQRG 420 (969)
Q Consensus 350 ~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 420 (969)
+...+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++.....+|+.|+|..|.++......
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~~ 212 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVED 212 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHHH
Confidence 3455678888888665432 124445556677888888776311 122223467888888777776444333
Q ss_pred cC--CcccchhhcccC--Cccccc-----cCccc--cCccccchhhccCcccCCCCCcccc---cccCCCEEEccCcccc
Q 002085 421 VG--SWKNLIVFKASN--NLFSGE-----IPVEL--TSLSHLNTLLLDGNKLSGKLPSQIV---SWTSLNNLNLARNELS 486 (969)
Q Consensus 421 ~~--~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~ 486 (969)
+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|++++..+..+. .+++|+.|+|+.|.|+
T Consensus 213 l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 213 ILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp HHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred HHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 43 567777777642 221111 11122 2467788888887777643333322 4677888888888776
Q ss_pred CC----CCcccccccccceEeccCccccccCCCccccccccEEEeecCc
Q 002085 487 GE----IPKAIGSLLVMVSLDLSGNQFSGEIPPEIGQLKLNTFNLSSNK 531 (969)
Q Consensus 487 ~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~ 531 (969)
+. ++..+..+++|+.|+|++|.++...-..+...-...+++++|.
T Consensus 293 d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 293 DEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred hHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 53 3444456777888888888776433333332112456777765
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=2.7e-09 Score=115.69 Aligned_cols=187 Identities=19% Similarity=0.185 Sum_probs=115.0
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCc--eeeEEEEEEcCC---ceEEE
Q 002085 641 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HAN--IVKLWCCISSEN---SKLLV 714 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv 714 (969)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999863 45899986322 33567899999998883 322 445555543333 35899
Q ss_pred EeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhccc--------------------------
Q 002085 715 YEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD-------------------------- 768 (969)
Q Consensus 715 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------- 768 (969)
|||++|.++.+.... .++..++..++.+++..++.||+.
T Consensus 95 m~~i~G~~l~~~~~~---------------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN---------------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKK 159 (304)
T ss_dssp EECCCCEECCHHHHH---------------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHH
T ss_pred EcccCCeECCccccc---------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHH
Confidence 999999877643221 133444455555555555555531
Q ss_pred -----------------------------CCCCeEecCCCCCcEEECC--CCcEEEeecccceecccCCCCcccccc---
Q 002085 769 -----------------------------CTPQIIHRDVKSSNILLDS--EFKAKIADFGLAKMLAKQGEPHTMSAV--- 814 (969)
Q Consensus 769 -----------------------------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~~~--- 814 (969)
..+.++|+|++|.||++++ +..+.++||+.+..-+...+-......
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~ 239 (304)
T 3sg8_A 160 LLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEE 239 (304)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTS
T ss_pred HhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccc
Confidence 1246899999999999998 456789999998753221000000000
Q ss_pred ---------ccCcccCc-hhhcccCCCCCccchhhHHHHHHHHHhCCCCC
Q 002085 815 ---------AGSFGYFA-PEYAYTTKVNEKIDIYSFGVVLLELVTGKEAN 854 (969)
Q Consensus 815 ---------~gt~~y~a-PE~~~~~~~~~~sDvwslG~il~elltg~~p~ 854 (969)
...+++.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 240 ~~~~~~~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 240 YGMEFVSKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CCHHHHHHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCHHHHHHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00011112 222211 122368999999999999998765
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.76 E-value=2.4e-10 Score=119.28 Aligned_cols=66 Identities=27% Similarity=0.500 Sum_probs=35.6
Q ss_pred CCCCCCEEeccCCcCCC--CCCCCcccCCCCcEEecCCCCCCCcCCCcccCcc--cccceecccccccCcCC
Q 002085 119 NCTKLQNLDLSQNYFVG--PIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLS--ELQTLYLYMNEFNGTFP 186 (969)
Q Consensus 119 ~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p 186 (969)
++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 45566666666666655 3344455566666666666666543 2233333 55566666666554443
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.65 E-value=1.4e-07 Score=105.53 Aligned_cols=82 Identities=9% Similarity=0.014 Sum_probs=42.1
Q ss_pred cccCCCcccEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCCCcCCCcccCcccc
Q 002085 92 IICDLKNLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFSGDIPRSIGRLSEL 171 (969)
Q Consensus 92 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 171 (969)
.+....+|+.+.+.. +++.+-..+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ +.......|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 344455666666653 355344556777777777777543 443444555554 4555555433 33222223333 245
Q ss_pred cceeccc
Q 002085 172 QTLYLYM 178 (969)
Q Consensus 172 ~~L~L~~ 178 (969)
+.+.+..
T Consensus 116 ~~i~lp~ 122 (379)
T 4h09_A 116 DDFEFPG 122 (379)
T ss_dssp SEEECCT
T ss_pred ccccCCC
Confidence 5555543
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.59 E-value=1.7e-07 Score=104.93 Aligned_cols=301 Identities=12% Similarity=0.032 Sum_probs=137.1
Q ss_pred cccCcccccceecccccccCcCCcccCCCCCcceeecccCCCCCCCCCCccccccCCCcEEEccCCcccccCchhhcCCC
Q 002085 164 SIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLAYNSNFKPAMIPIEFGMLKKLKTLWMTEANLIGEIPEAMSNLS 243 (969)
Q Consensus 164 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 243 (969)
++....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ...+-...|.++ +|+.+.+.. ++......+|.+ .
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~---v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~-~ 113 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST---VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQG-T 113 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT---CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTT-C
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc---ceEechhhhcCC-CCceEECCc-eeeEeccceecc-C
Confidence 456667888888864 456566677888888888888654 222223344444 444444432 122222223332 2
Q ss_pred chhhhhccCCcCCCCCCchhhcCcccchhhccCcccccCCCCchhhcccccccccCccccccCCccccCcccchhhhhcc
Q 002085 244 SLEILALNGNHLEGAIPSGLFLLNNLTQLFLYDNILSGEIPSSVEALKLTDIDLSMNNLTGSIPEEFGKLKNLQLLGLFS 323 (969)
Q Consensus 244 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 323 (969)
+|+.+.+..+ ++......|...+++.+.+..+ ++......|..+.+++.+.+..
T Consensus 114 ~L~~i~lp~~-------------------------~~~i~~~~F~~~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~ 167 (379)
T 4h09_A 114 DLDDFEFPGA-------------------------TTEIGNYIFYNSSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSS 167 (379)
T ss_dssp CCSEEECCTT-------------------------CCEECTTTTTTCCCCEEEECTT-CCEECSCTTTTCTTCCEEEECT
T ss_pred CcccccCCCc-------------------------cccccccccccceeeeeeccce-eeccccchhccccccccccccc
Confidence 3444444332 1112222222223333333222 2223344455555555554443
Q ss_pred ccCcCcCCcccccccccCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccCCCccccCCCccc-cccCcccccc
Q 002085 324 NHLSGEVPASIGVVAFENNLSGAVPKSLGNCRTLRTVQLYSNRFSGELPTGLWTTFNLSSLMLSDNTIS-GELPSKTAWN 402 (969)
Q Consensus 324 N~l~~~~p~~~~~l~~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~ 402 (969)
+.......... ..+........+..+..+..+.+..+.-. .....+....+|+.+.+..+--. +.-.......
T Consensus 168 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~ 241 (379)
T 4h09_A 168 NNKNYVAENYV-----LYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSGVTTLGDGAFYGMKA 241 (379)
T ss_dssp TCSSEEEETTE-----EEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTTCCEECTTTTTTCSS
T ss_pred ccceeecccce-----ecccccceeccccccccccccccccceeE-EeecccccccccceeeeccceeEEccccccCCcc
Confidence 33221000000 00000011112223333444433322211 22333344444555444333110 0001112234
Q ss_pred ccEEEeeccccCCCcccccCCcccchhhcccCCccccccCccccCccccchhhccCcccCCCCCcccccccCCCEEEccC
Q 002085 403 LTRLEISNNRFSGQIQRGVGSWKNLIVFKASNNLFSGEIPVELTSLSHLNTLLLDGNKLSGKLPSQIVSWTSLNNLNLAR 482 (969)
Q Consensus 403 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 482 (969)
|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++......|.++.+|+.+.+.++.++..-...|.+|.+|+.++|..
T Consensus 242 L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 242 LDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 555555544 44344455666666666666443 4334445566666677777666666644445566666777777654
Q ss_pred ccccCCCCcccccccccceEeccC
Q 002085 483 NELSGEIPKAIGSLLVMVSLDLSG 506 (969)
Q Consensus 483 N~l~~~~p~~~~~l~~L~~L~ls~ 506 (969)
+ ++..-..+|.++.+|+.+.+..
T Consensus 320 ~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 320 A-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp T-CCEECTTTTTTCTTCCCCCCCT
T ss_pred c-ccEEHHHHhhCCCCCCEEEECC
Confidence 3 4433345666666666666543
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=2.3e-08 Score=104.26 Aligned_cols=92 Identities=24% Similarity=0.290 Sum_probs=59.8
Q ss_pred cCCcccchh--hcccCCccc---cccCccccCccccchhhccCcccCC--CCCcccccccCCCEEEccCccccCCCCccc
Q 002085 421 VGSWKNLIV--FKASNNLFS---GEIPVELTSLSHLNTLLLDGNKLSG--KLPSQIVSWTSLNNLNLARNELSGEIPKAI 493 (969)
Q Consensus 421 ~~~l~~L~~--L~l~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 493 (969)
+...+.|.. ++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 344455665 666777433 2222223457788888888888876 4456666778888888888888754 334
Q ss_pred cccc--ccceEeccCccccccCC
Q 002085 494 GSLL--VMVSLDLSGNQFSGEIP 514 (969)
Q Consensus 494 ~~l~--~L~~L~ls~N~l~g~~p 514 (969)
..+. +|++|+|++|++++.+|
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhcccCCcceEEccCCcCccccC
Confidence 4444 77778888888777666
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.50 E-value=6e-07 Score=95.27 Aligned_cols=137 Identities=15% Similarity=0.118 Sum_probs=93.9
Q ss_pred ceeeecCcE-EEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCCceEEEEeecc
Q 002085 642 NLIGSGGSG-QVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLLVYEYME 719 (969)
Q Consensus 642 ~~lG~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 719 (969)
+.+..|..| .||+......+..+++|+-... ....+.+|..+++.+. +--+.++++++.+++..++|||+++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 345556655 6999887767778999986432 3467888999998884 3347788889999999999999999
Q ss_pred CCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhccc-------------------------------
Q 002085 720 NQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHD------------------------------- 768 (969)
Q Consensus 720 ~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------- 768 (969)
|.++.+...... .....++.+++..++.||..
T Consensus 104 G~~~~~~~~~~~-----------------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (272)
T 4gkh_A 104 GKTAFQVLEEYP-----------------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD 166 (272)
T ss_dssp SEEHHHHHHHCG-----------------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGG
T ss_pred CccccccccCCH-----------------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhh
Confidence 988766543211 11112222333333333311
Q ss_pred ------------------------CCCCeEecCCCCCcEEECCCCcEEEeeccccee
Q 002085 769 ------------------------CTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 801 (969)
Q Consensus 769 ------------------------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 801 (969)
..+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 167 FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122489999999999999887778999998764
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=5.3e-07 Score=98.19 Aligned_cols=137 Identities=17% Similarity=0.199 Sum_probs=93.2
Q ss_pred CCCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcccc----CceeeEEEEEEcCCceE
Q 002085 637 SLTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH----ANIVKLWCCISSENSKL 712 (969)
Q Consensus 637 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~ 712 (969)
.+...+.++.|....||++ |..+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 4556788999999999997 556899976322 223568899999988865 234555554 5679
Q ss_pred EEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccC-----------------------
Q 002085 713 LVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDC----------------------- 769 (969)
Q Consensus 713 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------- 769 (969)
+||||++|.++.+.... .++...+..++.+++..++.||+..
T Consensus 104 lvme~i~G~~l~~~~~~---------------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (320)
T 3r70_A 104 NIMKYIKGERITYEQYH---------------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDK 168 (320)
T ss_dssp EEEECCCCBCCCHHHHT---------------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHH
T ss_pred EEEeecCCccccccccc---------------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHH
Confidence 99999999887632210 1233333444444444444444221
Q ss_pred -------------------------------------CCCeEecCCCCCcEEECCCCcEEEeecccceec
Q 002085 770 -------------------------------------TPQIIHRDVKSSNILLDSEFKAKIADFGLAKML 802 (969)
Q Consensus 770 -------------------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 802 (969)
.+.++|+|++|.||+++.+..+.++||+.+..-
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 169 KLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 235799999999999998766799999998653
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=3.4e-08 Score=98.11 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=34.0
Q ss_pred ccCccccchhhccCcccCCC----CCcccccccCCCEEEc--cCccccCC----CCcccccccccceEeccCcccc
Q 002085 445 LTSLSHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNL--ARNELSGE----IPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 445 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
+...++|++|+|++|+|++. +...+...++|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 33445556666666665532 2334444555666666 55665532 2233334455666666666554
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.28 E-value=5.4e-08 Score=96.66 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=61.3
Q ss_pred CCccccCCCcccEEEccCC-CCCCC----CCcccCCCCCCCEEeccCCcCCCC----CCCCcccCCCCcEEecCCCCCCC
Q 002085 89 IPPIICDLKNLTTIDLSSN-SIPGE----FPEFLYNCTKLQNLDLSQNYFVGP----IPSDIDRISGLQCIDLGGNNFSG 159 (969)
Q Consensus 89 ~~~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 159 (969)
+...+...+.|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666778888888888 77632 345566677788888888887642 23334455677777777777764
Q ss_pred c----CCCcccCcccccceec--ccccccC
Q 002085 160 D----IPRSIGRLSELQTLYL--YMNEFNG 183 (969)
Q Consensus 160 ~----~p~~~~~l~~L~~L~L--~~N~l~~ 183 (969)
. +...+...++|++|+| ++|.|+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 2 3444555566777777 6666653
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25 E-value=7e-06 Score=88.53 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=56.1
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccC---ceeeEEEEEE-cCCceEEEEe
Q 002085 641 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA---NIVKLWCCIS-SENSKLLVYE 716 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e 716 (969)
.+.++.|....||+. |..+++|+... ......+.+|+++++.+.+. .+.+++.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 466889999999987 45688897522 23356899999999999642 3566677664 4566889999
Q ss_pred eccCCCHHH
Q 002085 717 YMENQSLDR 725 (969)
Q Consensus 717 ~~~~gsL~~ 725 (969)
|++|.++.+
T Consensus 94 ~i~G~~l~~ 102 (306)
T 3tdw_A 94 KVQGQILGE 102 (306)
T ss_dssp CCCSEECHH
T ss_pred ccCCeECch
Confidence 999988765
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=1.1e-05 Score=89.15 Aligned_cols=75 Identities=9% Similarity=0.096 Sum_probs=56.7
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccC--ceeeEEEEEEcC-CceEEEEe
Q 002085 640 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA--NIVKLWCCISSE-NSKLLVYE 716 (969)
Q Consensus 640 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~-~~~~lv~e 716 (969)
..+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+... .+.++++++.+. +..|+|||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 456789999999999876 4788999987432 2578888898888543 356677776664 67899999
Q ss_pred eccCCCHH
Q 002085 717 YMENQSLD 724 (969)
Q Consensus 717 ~~~~gsL~ 724 (969)
|++|.++.
T Consensus 115 ~l~G~~l~ 122 (362)
T 3ovc_A 115 RAQGVTLQ 122 (362)
T ss_dssp CCCSEETT
T ss_pred ecCCCCcc
Confidence 99986654
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.11 E-value=7.3e-06 Score=87.26 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=58.3
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccC---ceeeEEEEEEcCCceEEEEe
Q 002085 640 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA---NIVKLWCCISSENSKLLVYE 716 (969)
Q Consensus 640 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e 716 (969)
..+.|+.|.++.||++... +|+.++||+..... ......+.+|++.++.+.+. .+.+++++. ..++|||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~---~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCC---cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 4578999999999999874 68889999864321 11135689999999999764 577888763 4799999
Q ss_pred eccCCCH
Q 002085 717 YMENQSL 723 (969)
Q Consensus 717 ~~~~gsL 723 (969)
|++|+++
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.94 E-value=1e-05 Score=89.48 Aligned_cols=85 Identities=6% Similarity=0.075 Sum_probs=56.4
Q ss_pred ccee-eecCcEEEEEEEEc--C----CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-c--CceeeEEEEEEcC--
Q 002085 641 SNLI-GSGGSGQVYRIDIN--G----AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-H--ANIVKLWCCISSE-- 708 (969)
Q Consensus 641 ~~~l-G~G~~g~Vy~~~~~--~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 708 (969)
.+.| +.|....+|+.... . +++.+++|+..............+.+|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999988753 1 15678999764322000000145678888888884 3 3577888887665
Q ss_pred -CceEEEEeeccCCCHHH
Q 002085 709 -NSKLLVYEYMENQSLDR 725 (969)
Q Consensus 709 -~~~~lv~e~~~~gsL~~ 725 (969)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45789999999876653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=3.8e-05 Score=86.22 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=49.8
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEEeccch-hcH---HHHHHHHHHHHHHhcccc--C-ceeeEEEEEEcCCceEE
Q 002085 641 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRK-LNQ---KLEKEFIAEIEILGTIRH--A-NIVKLWCCISSENSKLL 713 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~---~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 713 (969)
.+.+|.|..+.||++....+++.|+||....... ... ...+.+..|.++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 4678999999999997655678899998643211 000 112456778888887742 3 34455544 3456789
Q ss_pred EEeeccCC
Q 002085 714 VYEYMENQ 721 (969)
Q Consensus 714 v~e~~~~g 721 (969)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.77 E-value=7.7e-05 Score=81.81 Aligned_cols=150 Identities=15% Similarity=0.221 Sum_probs=80.2
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-----cCceeeEE-E--EEEcCCceEE
Q 002085 642 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-----HANIVKLW-C--CISSENSKLL 713 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~l 713 (969)
+.|+.|..+.||++... +..+++|+..... ..+..|.++++.+. .|.++... + +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~~-------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRPE-------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSCH-------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCCH-------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 45666778899998774 3458999885421 23334555555542 34444310 0 1234567899
Q ss_pred EEeeccCCCHH--------------HHhccCcCccc-cCCCCcccccCChHHH---------------------------
Q 002085 714 VYEYMENQSLD--------------RWLHGRKRSLV-SGSSSVHQHVLHWPTR--------------------------- 751 (969)
Q Consensus 714 v~e~~~~gsL~--------------~~l~~~~~~~~-~~~~~~~~~~l~~~~~--------------------------- 751 (969)
||||++|..+. ..+|....... +...........|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986542 11222111100 0000000111233221
Q ss_pred ----HHHHHHHHHhhhhhcc----------cCCCCeEecCCCCCcEEECCCCcEEEeecccce
Q 002085 752 ----LQIAIGAAQGLCYMHH----------DCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 800 (969)
Q Consensus 752 ----~~i~~~ia~~L~~LH~----------~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 800 (969)
..+..++..++++|++ .....++|+|+++.||+++.++.+.++||+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345666653 124589999999999999888899999999875
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.61 E-value=8.1e-06 Score=78.72 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=22.6
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEeccCCc-CC
Q 002085 98 NLTTIDLSSNSIPGEFPEFLYNCTKLQNLDLSQNY-FV 134 (969)
Q Consensus 98 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~ 134 (969)
+|++|||+++.|+..--..+..+++|++|+|++|. |+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 56777777766665444455666666666666663 44
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.60 E-value=9.9e-06 Score=78.08 Aligned_cols=84 Identities=12% Similarity=0.097 Sum_probs=58.9
Q ss_pred CCCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCC-CCCcCCCcccCc----ccccceeccccc-ccCcCCcccCCCCC
Q 002085 121 TKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNN-FSGDIPRSIGRL----SELQTLYLYMNE-FNGTFPKEIGDLSN 194 (969)
Q Consensus 121 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 194 (969)
.+|++|||+++.|+..--..+.++++|++|+|++|. |+..--..++.+ ++|++|+|++|. ||...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468999999998886655667788888889888884 665433345543 368888888874 76554455666677
Q ss_pred cceeecccCC
Q 002085 195 LEVLGLAYNS 204 (969)
Q Consensus 195 L~~L~L~~N~ 204 (969)
|++|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777776653
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.46 E-value=0.00091 Score=71.63 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=60.7
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc---cCceeeEEEEEEcCCceEEEEe
Q 002085 640 ESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR---HANIVKLWCCISSENSKLLVYE 716 (969)
Q Consensus 640 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e 716 (969)
..+.|+.|....+|+... ++..+++|+.... ....+.+|.+.++.+. ...+.+++++....+..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 346789999999999875 4678899987432 1467889999999884 3578888988888888999999
Q ss_pred eccCCCH
Q 002085 717 YMENQSL 723 (969)
Q Consensus 717 ~~~~gsL 723 (969)
|+++..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998754
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.33 E-value=0.00065 Score=76.65 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=48.2
Q ss_pred CCCeEecCCCCCcEEECCCCcEEEeecccceecccCCCCcccccccc--CcccCchhhcccC---CCCCccchhhHHHHH
Q 002085 770 TPQIIHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAG--SFGYFAPEYAYTT---KVNEKIDIYSFGVVL 844 (969)
Q Consensus 770 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDvwslG~il 844 (969)
.+.++|+|++|.||+++.++ ++++||+.+..-... ........ ...|++|+..... ......++.+....+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~---~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG---FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH---HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH---HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 34899999999999999876 999999988753111 11111111 1346666654311 112234556778888
Q ss_pred HHHHhCC
Q 002085 845 LELVTGK 851 (969)
Q Consensus 845 ~elltg~ 851 (969)
|+.+++.
T Consensus 307 ~~~y~~~ 313 (420)
T 2pyw_A 307 WNLFNKR 313 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=7.5e-05 Score=73.36 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=29.9
Q ss_pred cccCccccchhhccCcccCCC----CCcccccccCCCEEEccCccccCC----CCcccccccccceEeccCc
Q 002085 444 ELTSLSHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNLARNELSGE----IPKAIGSLLVMVSLDLSGN 507 (969)
Q Consensus 444 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N 507 (969)
.+..-+.|+.|+|++|+|.+. +.+.+..-+.|+.|+|++|+|... +-+++..-+.|+.|+|++|
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 334444555555555555422 222233344556666666655532 2223333345666666543
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.96 E-value=0.0016 Score=69.77 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=45.6
Q ss_pred CCccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCce-eeEEEEEEcCCceEEEEe
Q 002085 638 LTESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHANI-VKLWCCISSENSKLLVYE 716 (969)
Q Consensus 638 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 716 (969)
+.-.+.|+.|....+|++ +.+++|+...... ......+|+.+++.+....+ .+++++ +++..++|+|
T Consensus 20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~----~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e 87 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTE----EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTR 87 (301)
T ss_dssp CCSCEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEE
T ss_pred ccceeEcCCcccccccee------eeEEEECCCCCcc----ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEe
Confidence 333678999999999998 3488998743211 01123457777777642222 455543 4445689999
Q ss_pred ec-cCCCH
Q 002085 717 YM-ENQSL 723 (969)
Q Consensus 717 ~~-~~gsL 723 (969)
|+ +|.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 66444
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.95 E-value=6.3e-05 Score=73.95 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=54.5
Q ss_pred cCCcccchhhcccCCccccc----cCccccCccccchhhccCcccCCC----CCcccccccCCCEEEccCc---cccCC-
Q 002085 421 VGSWKNLIVFKASNNLFSGE----IPVELTSLSHLNTLLLDGNKLSGK----LPSQIVSWTSLNNLNLARN---ELSGE- 488 (969)
Q Consensus 421 ~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~- 488 (969)
+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|+|++. +-+.+..-+.|+.|+|++| .+...
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 33344555555555555532 334455567788888888888743 2234555567888888865 33321
Q ss_pred ---CCcccccccccceEeccCcccc
Q 002085 489 ---IPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 489 ---~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
+-..+..-+.|+.|+++.|.+.
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCcc
Confidence 3344555578888888877654
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.82 E-value=0.0026 Score=71.61 Aligned_cols=74 Identities=20% Similarity=0.232 Sum_probs=49.5
Q ss_pred cceeeecCcEEEEEEEEcC-------CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCCceE
Q 002085 641 SNLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKL 712 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 712 (969)
.+.|+.|....||++.... .++.|++|+..... . ...+.+|..+++.+. +.-..++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 3567888899999998753 25689999873321 1 134457888888884 3333566665543 3
Q ss_pred EEEeeccCCCH
Q 002085 713 LVYEYMENQSL 723 (969)
Q Consensus 713 lv~e~~~~gsL 723 (969)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999987444
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.76 E-value=0.0035 Score=68.09 Aligned_cols=79 Identities=9% Similarity=0.130 Sum_probs=41.3
Q ss_pred ceeeecCcEE-EEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhcccc--CceeeEEEEEEcCCceEEEEeec
Q 002085 642 NLIGSGGSGQ-VYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRH--ANIVKLWCCISSENSKLLVYEYM 718 (969)
Q Consensus 642 ~~lG~G~~g~-Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~ 718 (969)
+.|+.|+... +|+.... +++.+++|....... ..+..|+++++.+.. -.+.+++.+..+. .+++||++
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDL 94 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCC
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeC
Confidence 4565555554 6676542 256677876533210 234456777776632 2345666654333 37899999
Q ss_pred cCCCHHHHhcc
Q 002085 719 ENQSLDRWLHG 729 (969)
Q Consensus 719 ~~gsL~~~l~~ 729 (969)
.+..+.+++..
T Consensus 95 ~~~~l~~~l~~ 105 (333)
T 3csv_A 95 GDALFTEVINN 105 (333)
T ss_dssp CSCBHHHHHHH
T ss_pred CCcchHHHhcC
Confidence 88787766543
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.0014 Score=60.10 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=40.5
Q ss_pred hhhccCcccC-CCCCcccccccCCCEEEccCccccCCCCcccccccccceEeccCcccc
Q 002085 453 TLLLDGNKLS-GKLPSQIVSWTSLNNLNLARNELSGEIPKAIGSLLVMVSLDLSGNQFS 510 (969)
Q Consensus 453 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 510 (969)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777776 34565443 36888888888888655566788888888888888875
No 436
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.71 E-value=0.012 Score=62.20 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=53.1
Q ss_pred CccceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-c--CceeeEEEEEEcCCceEEEE
Q 002085 639 TESNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-H--ANIVKLWCCISSENSKLLVY 715 (969)
Q Consensus 639 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~ 715 (969)
...+.+|.|..+.||+.+.. +|+.|++|+...... .....+.+|++.|+.+. . -.+.+++++. ..++||
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~---~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred EEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCc---chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 34577899999999999875 688999997643321 11245788999988873 2 2345555542 358899
Q ss_pred eeccCCC
Q 002085 716 EYMENQS 722 (969)
Q Consensus 716 e~~~~gs 722 (969)
||++++.
T Consensus 90 e~l~~~~ 96 (288)
T 3f7w_A 90 EWVDERP 96 (288)
T ss_dssp ECCCCCC
T ss_pred EeecccC
Confidence 9998764
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.52 E-value=0.0028 Score=69.70 Aligned_cols=150 Identities=13% Similarity=0.096 Sum_probs=82.5
Q ss_pred ceeeecCcEEEEEEEEcC-------CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCCceEE
Q 002085 642 NLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLL 713 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 713 (969)
+.+..|....+|++.... +++.|++|+.-.. . .....+.+|.++++.+. +.-..++++++.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 567778888999988742 3568999985221 1 11345668999998884 3334666766654 29
Q ss_pred EEeeccCCCHHHH-hc----------cCcCccccCCCCcccccC--ChHHHHHHHHHHHHh-------------------
Q 002085 714 VYEYMENQSLDRW-LH----------GRKRSLVSGSSSVHQHVL--HWPTRLQIAIGAAQG------------------- 761 (969)
Q Consensus 714 v~e~~~~gsL~~~-l~----------~~~~~~~~~~~~~~~~~l--~~~~~~~i~~~ia~~------------------- 761 (969)
||||++|.+|..- +. .-.+.... .... .... -|.++.++..++...
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~-~~~~-~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGM-EMPF-TKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTC-CCSS-CCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCC-CCCC-CCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 9999998655311 00 00000000 0000 0111 234444554443221
Q ss_pred hhh----hccc-CCCCeEecCCCCCcEEECCC----CcEEEeeccccee
Q 002085 762 LCY----MHHD-CTPQIIHRDVKSSNILLDSE----FKAKIADFGLAKM 801 (969)
Q Consensus 762 L~~----LH~~-~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgla~~ 801 (969)
+.. |... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 122 2111 13468999999999999876 7899999998864
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.46 E-value=0.0063 Score=68.81 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=47.3
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCc-eeeEEEEEEcCCceEEEEeecc
Q 002085 641 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN-IVKLWCCISSENSKLLVYEYME 719 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~ 719 (969)
.+.|+.|-...+|++.....+..|++|+....... .-...+|..+++.+...+ ..++++.+.+ .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~----~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE----IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS----CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh----hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeC
Confidence 46788899999999988644578899987332110 011257888888885333 3567766632 35999999
Q ss_pred CCCH
Q 002085 720 NQSL 723 (969)
Q Consensus 720 ~gsL 723 (969)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.39 E-value=0.0062 Score=55.73 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=21.3
Q ss_pred CCCEEeccCCcCCCCCCCCcccCCCCcEEecCCCCCC
Q 002085 122 KLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGGNNFS 158 (969)
Q Consensus 122 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 158 (969)
+|++|+|++|+|+..-+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4556666666665444445556666666666666553
No 440
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.26 E-value=0.0073 Score=65.17 Aligned_cols=153 Identities=10% Similarity=0.074 Sum_probs=78.0
Q ss_pred cceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCc--eeeEEEE------EEcCCceE
Q 002085 641 SNLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN--IVKLWCC------ISSENSKL 712 (969)
Q Consensus 641 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~ 712 (969)
.+.|+.|....+|++... +| .+++|+..... ....+..|+++++.+.... +.+++.. ....+..+
T Consensus 27 ~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~ 99 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA 99 (322)
T ss_dssp EEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred eeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence 355777888999998774 23 58899875421 1234556777777763211 2233211 12235678
Q ss_pred EEEeeccCCCHHH--------------HhccCcCccccCCCCcccccCChHHHHHH------------HHHHHHhhhhhc
Q 002085 713 LVYEYMENQSLDR--------------WLHGRKRSLVSGSSSVHQHVLHWPTRLQI------------AIGAAQGLCYMH 766 (969)
Q Consensus 713 lv~e~~~~gsL~~--------------~l~~~~~~~~~~~~~~~~~~l~~~~~~~i------------~~~ia~~L~~LH 766 (969)
++|+|++|..+.. .+|............. .....|.....- ...+...+++++
T Consensus 100 ~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~ 178 (322)
T 2ppq_A 100 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNA-LSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA 178 (322)
T ss_dssp EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCT-TSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred EEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCc-cChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 9999999865321 1121111000000000 001123221100 011223333333
Q ss_pred c----cCCCCeEecCCCCCcEEECCCCcEEEeeccccee
Q 002085 767 H----DCTPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 801 (969)
Q Consensus 767 ~----~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 801 (969)
+ ....+++|+|+.+.||++++++.+.++||+.+..
T Consensus 179 ~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 179 AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 2 1134799999999999999876668999998753
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.19 E-value=0.0084 Score=66.12 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=43.3
Q ss_pred ceeeecCcEEEEEEEEcC--------CCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccCc-eeeEEEEEEcCCceE
Q 002085 642 NLIGSGGSGQVYRIDING--------AGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHAN-IVKLWCCISSENSKL 712 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~ 712 (969)
+.++.|....+|++.... .++.+++|+...... . ......|.++++.+.... +.++++.. . .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---E-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---G-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---c-eecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 567788888999988743 126788997643211 0 112357888888774333 44666544 2 37
Q ss_pred EEEeeccCCCH
Q 002085 713 LVYEYMENQSL 723 (969)
Q Consensus 713 lv~e~~~~gsL 723 (969)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999997543
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.94 E-value=0.017 Score=62.42 Aligned_cols=75 Identities=9% Similarity=0.100 Sum_probs=46.1
Q ss_pred ceeeecCcEEEEEEEEcCCCcEEEEEEEeccchhcHHHHHHHHHHHHHHhccccC--ceeeEEEE-----EEcCCceEEE
Q 002085 642 NLIGSGGSGQVYRIDINGAGEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIRHA--NIVKLWCC-----ISSENSKLLV 714 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv 714 (969)
+.++ |....||++... +|+.+++|+...... ....+..|..+++.+... .+++++.. ....+..++|
T Consensus 32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEcC-CCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 4566 778899987653 466799998853211 124566677777777421 23333332 1224566889
Q ss_pred EeeccCCC
Q 002085 715 YEYMENQS 722 (969)
Q Consensus 715 ~e~~~~gs 722 (969)
|||++|..
T Consensus 106 ~~~i~G~~ 113 (328)
T 1zyl_A 106 FPSVGGRQ 113 (328)
T ss_dssp EECCCCEE
T ss_pred EEecCCCC
Confidence 99998754
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.56 E-value=0.013 Score=63.57 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=28.3
Q ss_pred CCCeEecCCCCCcEEECCCCcEEEeeccccee
Q 002085 770 TPQIIHRDVKSSNILLDSEFKAKIADFGLAKM 801 (969)
Q Consensus 770 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~~ 801 (969)
...++|+|+.+.||+++.++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999988764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.50 E-value=0.036 Score=61.12 Aligned_cols=154 Identities=13% Similarity=0.117 Sum_probs=83.2
Q ss_pred ceeeecCcEEEEEEEEcC-------CCcEEEEEEEeccchh-----------cHH----HHHHHHHHHHHHhccc-cCce
Q 002085 642 NLIGSGGSGQVYRIDING-------AGEFVAVKRIWNNRKL-----------NQK----LEKEFIAEIEILGTIR-HANI 698 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~-----------~~~----~~~~~~~E~~~l~~l~-h~ni 698 (969)
+.|..|-...+|++.... .++.|.+++.-..... +.+ ..+.+..|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778888999988752 1367888876332110 000 0123345888888884 4445
Q ss_pred eeEEEEEEcCCceEEEEeeccCCCHHHHh-c----------cCcCccccCCCCcccccCC--hHHHHHHHHHHHH-----
Q 002085 699 VKLWCCISSENSKLLVYEYMENQSLDRWL-H----------GRKRSLVSGSSSVHQHVLH--WPTRLQIAIGAAQ----- 760 (969)
Q Consensus 699 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l-~----------~~~~~~~~~~~~~~~~~l~--~~~~~~i~~~ia~----- 760 (969)
.++++++.+ .+|+||++|.+|..-- . ...+.. ...... ..... |....++..++..
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH-~~~~~~-~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFH-GMKMPF-NKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHH-TCCCSS-CCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHh-CCCCCC-CCCcchHHHHHHHHHHHHHhccCcc
Confidence 677776643 2899999975542110 0 000000 000000 11122 2333333333211
Q ss_pred -----------------hh----hhhccc-CCCCeEecCCCCCcEEECCC------CcEEEeeccccee
Q 002085 761 -----------------GL----CYMHHD-CTPQIIHRDVKSSNILLDSE------FKAKIADFGLAKM 801 (969)
Q Consensus 761 -----------------~L----~~LH~~-~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfgla~~ 801 (969)
-+ ++|... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 11 122211 13468899999999999887 7899999998754
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.50 E-value=0.038 Score=54.43 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=67.8
Q ss_pred CCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCeEecCCCCCcEEECCCCcEEEeecccce
Q 002085 721 QSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQIIHRDVKSSNILLDSEFKAKIADFGLAK 800 (969)
Q Consensus 721 gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgla~ 800 (969)
-+|.++|.... .++++.++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~------------~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~ 97 (229)
T 2yle_A 33 LSLEEILRLYN------------QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD 97 (229)
T ss_dssp EEHHHHHHHHT------------SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---
T ss_pred ccHHHHHHHcC------------CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc
Confidence 48999998765 469999999999999999877621101 1 1233456899999999988764 1110
Q ss_pred ecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCCC
Q 002085 801 MLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEAN 854 (969)
Q Consensus 801 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~ 854 (969)
.....+.|||... ...+.+.=|||+|+++|..+--+.|.
T Consensus 98 --------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 --------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -----------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred --------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 1122456888653 34567888999999999999766553
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.84 E-value=0.099 Score=58.18 Aligned_cols=74 Identities=11% Similarity=0.096 Sum_probs=46.5
Q ss_pred ceeeecCcEEEEEEEEcCC-------CcEEEEEEEeccchhcHHHHHHHHHHHHHHhccc-cCceeeEEEEEEcCCceEE
Q 002085 642 NLIGSGGSGQVYRIDINGA-------GEFVAVKRIWNNRKLNQKLEKEFIAEIEILGTIR-HANIVKLWCCISSENSKLL 713 (969)
Q Consensus 642 ~~lG~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 713 (969)
+.+..|-...+|++..... ++.|++|+...... ..-...+|.++++.+. +.-..++++.+. -++
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~----~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~ 147 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG----KFYDSKVELDVFRYLSNINIAPNIIADFP----EGR 147 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc----hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence 5667788889999887521 57799998633211 0112356888888774 333455555332 378
Q ss_pred EEeeccCCCH
Q 002085 714 VYEYMENQSL 723 (969)
Q Consensus 714 v~e~~~~gsL 723 (969)
||||++|.+|
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.47 E-value=1 Score=49.78 Aligned_cols=30 Identities=30% Similarity=0.458 Sum_probs=25.3
Q ss_pred CeEecCCCCCcEEE------CCCCcEEEeeccccee
Q 002085 772 QIIHRDVKSSNILL------DSEFKAKIADFGLAKM 801 (969)
Q Consensus 772 ~ivH~Dlkp~Nill------~~~~~~kl~Dfgla~~ 801 (969)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999998864
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.10 E-value=0.61 Score=32.73 Aligned_cols=26 Identities=31% Similarity=0.249 Sum_probs=16.0
Q ss_pred hhhhHHHHHHHHHHHHHhhheeeeee
Q 002085 581 HLALILVLAILVLLVTVSLSWFVVRD 606 (969)
Q Consensus 581 ~~~~iiv~~~~~~l~~~~l~~~~~~~ 606 (969)
.++..++.+++++++++.++|+++|+
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 45666666676666666666665543
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=83.82 E-value=0.62 Score=32.61 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=15.0
Q ss_pred hhhhHHHHHHHHHHHHHhhheeeeee
Q 002085 581 HLALILVLAILVLLVTVSLSWFVVRD 606 (969)
Q Consensus 581 ~~~~iiv~~~~~~l~~~~l~~~~~~~ 606 (969)
.++..++.+++++++++.++|+++|+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 35555666666666666555665543
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.55 E-value=7.7 Score=38.05 Aligned_cols=115 Identities=8% Similarity=0.042 Sum_probs=75.1
Q ss_pred ccCceeeEEEEEEcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhhhhcccCCCCe
Q 002085 694 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLCYMHHDCTPQI 773 (969)
Q Consensus 694 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 773 (969)
.||+.+.. ..-.+.+.+.+.++.-+ +...+-.- ...+...+++++.+|+....+++..
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i--------------k~~~~~eKlr~l~ni~~l~~~~~~r----- 100 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI--------------KSFTKNEKLRYLLNIKNLEEVNRTR----- 100 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG--------------GGSCHHHHHHHHHHGGGGGGGGGSS-----
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH--------------HhcCHHHHHHHHHHHHHHHHHhcCc-----
Confidence 58888866 45555565555555433 22222211 2367789999999999988777743
Q ss_pred EecCCCCCcEEECCCCcEEEeecccceecccCCCCccccccccCcccCchhhcccCCCCCccchhhHHHHHHHHHhCCCC
Q 002085 774 IHRDVKSSNILLDSEFKAKIADFGLAKMLAKQGEPHTMSAVAGSFGYFAPEYAYTTKVNEKIDIYSFGVVLLELVTGKEA 853 (969)
Q Consensus 774 vH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p 853 (969)
+|--+.|+|++++.++.+++.=-|+...+ +|. ..+...=.-.+=|++..+++++..
T Consensus 101 ~tf~L~P~NL~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~ 156 (215)
T 4ann_A 101 YTFVLAPDELFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQS 156 (215)
T ss_dssp EECCCSGGGEEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCC
T ss_pred eEEEEecceEEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCC
Confidence 78899999999999999999866653222 111 111112233566888889988877
Q ss_pred C
Q 002085 854 N 854 (969)
Q Consensus 854 ~ 854 (969)
|
T Consensus 157 F 157 (215)
T 4ann_A 157 F 157 (215)
T ss_dssp H
T ss_pred H
Confidence 6
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=72.83 E-value=13 Score=36.56 Aligned_cols=83 Identities=12% Similarity=0.012 Sum_probs=59.2
Q ss_pred ccCceeeEEEEEEcCCceEEEEeeccCCCHHHHhccCcCccccCCCCcccccCChHHHHHHHHHHHHhhh-hhcccCCCC
Q 002085 694 RHANIVKLWCCISSENSKLLVYEYMENQSLDRWLHGRKRSLVSGSSSVHQHVLHWPTRLQIAIGAAQGLC-YMHHDCTPQ 772 (969)
Q Consensus 694 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ 772 (969)
.||+. -...-.+++...+.++.-+++.=...++ .++...+++++.+++.... +++.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----------------~~~~~eKlrll~nl~~L~~~~~~~----- 104 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----------------KTTLLSRIRAAIHLVSKVKHHSAR----- 104 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----------------TSCHHHHHHHHHHHHHHHSSCCSS-----
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----------------hcCHHHHHHHHHHHHHHHHHhhhC-----
Confidence 57877 3334456666767676553332222232 2677899999999999888 7774
Q ss_pred eEecCCCCCcEEECCCCcEEEeecccc
Q 002085 773 IIHRDVKSSNILLDSEFKAKIADFGLA 799 (969)
Q Consensus 773 ivH~Dlkp~Nill~~~~~~kl~Dfgla 799 (969)
-+|--+.|+|+++|.++.+++.=.|+-
T Consensus 105 r~tf~l~P~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 105 RLIFIVCPENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp SEECCCCGGGEEECTTCCEEESCCEET
T ss_pred ceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence 478889999999999999999876653
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.06 E-value=0.38 Score=54.28 Aligned_cols=63 Identities=8% Similarity=-0.041 Sum_probs=17.2
Q ss_pred ccceeeecCcEEEEEEEEcCCCcEEEE------EEEeccchhcHHHHHHHHHHHHHHhccccCceeeEEEEEE
Q 002085 640 ESNLIGSGGSGQVYRIDINGAGEFVAV------KRIWNNRKLNQKLEKEFIAEIEILGTIRHANIVKLWCCIS 706 (969)
Q Consensus 640 ~~~~lG~G~~g~Vy~~~~~~~~~~vav------K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 706 (969)
..+.+| ||.||+|.+.....+||| |..+.. ....+....+.+|..+++..+|||+++..++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~-~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD-GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccc-cccccccccccccccccccccccccCCCcceEE
Confidence 345566 999999999765567898 655332 223333457888999999999999999877654
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=64.30 E-value=3.9 Score=27.71 Aligned_cols=28 Identities=11% Similarity=0.167 Sum_probs=13.8
Q ss_pred CcchhhhHHHHHHHHHHHHHhhheeeee
Q 002085 578 SSKHLALILVLAILVLLVTVSLSWFVVR 605 (969)
Q Consensus 578 ~~~~~~~iiv~~~~~~l~~~~l~~~~~~ 605 (969)
+.-.++.+++..++.+++++.++||++|
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCceeeeehHHHHHHHHHHHHHHHHee
Confidence 3334555555555544445555555443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.91 E-value=81 Score=26.46 Aligned_cols=46 Identities=13% Similarity=0.118 Sum_probs=23.2
Q ss_pred CCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCcccCCCCcEEecCC
Q 002085 108 SIPGEFPEFLYNCTKLQNLDLSQNYFVGPIPSDIDRISGLQCIDLGG 154 (969)
Q Consensus 108 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 154 (969)
.++.+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344455555566665555543 3323344555555555555544
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.34 E-value=83 Score=26.39 Aligned_cols=39 Identities=13% Similarity=0.079 Sum_probs=18.0
Q ss_pred CCcccCcccccceecccccccCcCCcccCCCCCcceeecc
Q 002085 162 PRSIGRLSELQTLYLYMNEFNGTFPKEIGDLSNLEVLGLA 201 (969)
Q Consensus 162 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 201 (969)
...|.++++|+.+.|-.+ ++.+....|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555555433 222334444444444444443
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=25.37 E-value=36 Score=23.25 Aligned_cols=6 Identities=17% Similarity=0.772 Sum_probs=2.3
Q ss_pred hheeee
Q 002085 599 LSWFVV 604 (969)
Q Consensus 599 l~~~~~ 604 (969)
++|++.
T Consensus 32 ~~~~~~ 37 (41)
T 2k9y_A 32 VGFFIH 37 (41)
T ss_dssp HHHSSS
T ss_pred HheeEe
Confidence 334433
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=25.21 E-value=40 Score=24.66 Aligned_cols=6 Identities=17% Similarity=0.323 Sum_probs=2.7
Q ss_pred hhhhcc
Q 002085 607 CLRRKR 612 (969)
Q Consensus 607 ~~~~~~ 612 (969)
+++|++
T Consensus 35 FFKR~~ 40 (54)
T 2l8s_A 35 FFKRPL 40 (54)
T ss_dssp HTTSCC
T ss_pred cccCCC
Confidence 344444
Done!