Your job contains 1 sequence.
>002091
MMALDVVTSASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKEL
NKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQ
ALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYAN
HLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASS
PREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGN
NLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQ
DLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQ
GCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKM
RMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQM
IKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFML
FSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAV
KLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWL
LDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQ
LLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESS
FCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFL
SSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNV
LQDQSSYF
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002091
(968 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 375 3.6e-34 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 358 4.3e-33 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 299 7.2e-32 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 335 7.0e-27 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 235 4.3e-25 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 181 9.0e-23 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 255 1.8e-21 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 245 3.8e-21 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 191 6.7e-20 4
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 180 1.1e-19 4
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 265 3.9e-19 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 235 7.0e-19 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 201 9.8e-19 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 158 1.7e-18 3
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 254 1.8e-18 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 152 1.5e-17 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 248 3.5e-17 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 231 4.6e-17 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 178 3.5e-16 4
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 182 6.5e-15 3
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 197 2.8e-12 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 187 4.0e-12 2
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 182 2.8e-11 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 191 3.1e-11 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 177 3.5e-11 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 195 3.9e-11 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 135 2.2e-10 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 140 2.3e-10 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 166 5.7e-10 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 189 8.4e-10 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 173 1.0e-09 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 168 1.0e-09 3
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 166 1.4e-09 2
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 174 1.4e-09 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 171 1.5e-09 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 157 1.5e-09 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 154 1.9e-09 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 173 1.9e-09 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 113 2.3e-09 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 162 2.8e-09 3
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 121 3.9e-09 3
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 169 4.8e-09 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 118 7.0e-09 2
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 164 9.5e-09 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 163 1.2e-08 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 165 1.3e-08 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 165 1.3e-08 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 165 1.3e-08 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 163 3.1e-08 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 163 3.1e-08 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 161 3.6e-08 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 160 4.5e-08 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 158 6.4e-08 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 168 6.8e-08 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 151 1.7e-07 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 156 1.7e-07 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 154 2.1e-07 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 154 2.1e-07 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 148 6.8e-07 1
SGD|S000005133 - symbol:SRP1 "Karyopherin alpha homolog" ... 113 8.1e-07 3
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 147 8.8e-07 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 149 1.0e-06 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 147 1.5e-06 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 156 1.9e-06 2
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 156 3.1e-06 2
POMBASE|SPCC962.03c - symbol:cut15 "karyopherin Cut15" sp... 125 3.3e-06 2
TAIR|locus:2087565 - symbol:AT3G20170 species:3702 "Arabi... 142 4.2e-06 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 144 5.5e-06 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 139 6.8e-06 1
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species... 118 7.0e-06 2
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 148 1.5e-05 2
TAIR|locus:2056529 - symbol:AT2G05810 "AT2G05810" species... 137 2.0e-05 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 135 3.1e-05 1
UNIPROTKB|H9KVH0 - symbol:KPNA7 "Importin subunit alpha" ... 134 3.5e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 146 3.6e-05 2
UNIPROTKB|C6K7I2 - symbol:KPNA7 "Importin subunit alpha-8... 133 4.4e-05 1
TAIR|locus:2125369 - symbol:MCA1 "AT4G35920" species:3702... 130 6.9e-05 1
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 133 7.2e-05 1
CGD|CAL0000730 - symbol:orf19.5682 species:5476 "Candida ... 98 9.7e-05 3
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 133 0.00010 1
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 129 0.00014 1
UNIPROTKB|F1NJS6 - symbol:KPNA2 "Importin subunit alpha" ... 110 0.00021 2
RGD|621419 - symbol:Kpna2 "karyopherin alpha 2" species:1... 97 0.00022 3
TAIR|locus:2827953 - symbol:MCA2 "AT2G17780" species:3702... 125 0.00024 1
POMBASE|SPBC1604.08c - symbol:imp1 "importin alpha" speci... 107 0.00026 3
UNIPROTKB|G4MZS0 - symbol:MGG_15072 "Importin subunit alp... 117 0.00028 2
UNIPROTKB|F1LT58 - symbol:F1LT58 "Uncharacterized protein... 98 0.00032 2
ZFIN|ZDB-GENE-030616-533 - symbol:ankar "ankyrin and arma... 129 0.00045 1
UNIPROTKB|E1C4J0 - symbol:KPNA5 "Importin subunit alpha" ... 124 0.00046 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 119 0.00049 1
ZFIN|ZDB-GENE-050522-22 - symbol:kpna5 "karyopherin alpha... 123 0.00059 1
FB|FBgn0040233 - symbol:cana "CENP-ana" species:7227 "Dro... 129 0.00064 1
TAIR|locus:2043709 - symbol:AT2G45720 "AT2G45720" species... 103 0.00084 2
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 375 (137.1 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 193/695 (27%), Positives = 307/695 (44%)
Query: 242 REKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFS--DG 299
RE K+F + + G P CP+T + + S+ R+ IE+W S D
Sbjct: 50 REAIEKWFKECRDSGRPPS-------CPLTSQELTS-TDVSASIAL-RNTIEEWRSRNDA 100
Query: 300 NNLCPLTMTVL----DTSILRPNKTLRQSIEEWKD-----RNTMITIASMKPKLVSTEVE 350
L ++ +T IL+ +RQ + RN+ + I + L ST
Sbjct: 101 AKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQL-IHMIIDMLKSTSHR 159
Query: 351 EVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEE-RKLAVALLLELSTC 409
L+ LQ + + D+ + +A GD V ++V+ L + R+ AV+LL ELS
Sbjct: 160 VRYKALQTLQVVVEGDDESKAI--VAEGD-TVRTLVKFLSHEPSKGREAAVSLLFELSKS 216
Query: 410 NTLRDQIGDVQGCILLLVTMASSDDNQAS--RDAQELLENLSFSDDNVVQMAKANYFKHL 467
L ++IG + G ++LLV + SS+ S A LEN+ S++ V QMA + L
Sbjct: 217 EALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEEIVRQMASYGRLQPL 276
Query: 468 LQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKAL 527
L +L G K+ MA+ L E+ L + K L+ V L+ L+ GD+ ++ A+KAL
Sbjct: 277 LGKLLEGSPETKLSMASFLGELPLNNDVKV-LVAQTVGSSLVDLMRSGDMPQREAALKAL 335
Query: 528 RNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXR-EETATAIMHLAVSTMYQESSQT 586
+SS + +I +G + PL+ R +E + I+ V+ Y T
Sbjct: 336 NKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATILANIVNIGYDFDKAT 395
Query: 587 PVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP-SAGNIKTTLTQCSAIPVLV 645
L S+ + L LI+ TGP +Q ++L+ L P + + + AI LV
Sbjct: 396 ----LVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAIKTSGAIISLV 451
Query: 646 QLCE-HDNENVRANAVKLFCCLVDDGDEAIIREHVGQKC-LETLVTII-QSSHNEEEIAS 702
Q E +N+++R ++KL L E + + G L +LV II + + EE A+
Sbjct: 452 QFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAIISEKTPITEEQAA 511
Query: 703 AMGILSKLPEVPQ-FTQWLLDAGALPIVLNFLKNGRQNDPN--RF--QVVENAVGALRRF 757
A G+L++LP+ TQ +L+ GA +++ + RQ D RF +E V L R
Sbjct: 512 AAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNPFLEGLVRILARI 571
Query: 758 TAPTNLEWQ--KRAAEAGVIPKLVQLLEY-GTTLTKEHAATSLARFSKNSLGLSR-PIPK 813
T N E + E V + LL+ G + +A +L S S+ L+R P P
Sbjct: 572 TFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLESIKLTRMPDPP 631
Query: 814 RKGFWCFSPPPEIGC----QVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACE---A 866
+ C S C V GLC I C L R ++E GA E A
Sbjct: 632 PVNY-CGSI---FSCVRKPHVVNGLCKIHQGICSL-----RETFCLVEG---GAVEKLVA 679
Query: 867 SLD-ALVTLIEGERLQNGSKVLEDANAIDRMVRFL 900
LD V ++E L S +LED +++ V+ L
Sbjct: 680 LLDHENVKVVEAA-LAALSSLLEDGLDVEKGVKIL 713
Score = 246 (91.7 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 85/291 (29%), Positives = 144/291 (49%)
Query: 698 EEIASAMGILSKLPEVPQ-FTQWLLDAGALPIVLNFLKNGRQNDPN--RF--QVVENAVG 752
EE A+A G+L++LP+ TQ +L+ GA +++ + RQ D RF +E V
Sbjct: 507 EEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNPFLEGLVR 566
Query: 753 ALRRFTAPTNLEWQ--KRAAEAGVIPKLVQLLEY-GTTLTKEHAATSLARFSKNSLGLSR 809
L R T N E + E V + LL+ G + +A +L S S+ L+R
Sbjct: 567 ILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLESIKLTR 626
Query: 810 -PIPKRKG-----FWCFSPPPEIG--CQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDH 861
P P F C P + C++H G+C + +FCL+E AV LV +L+ +
Sbjct: 627 MPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVALLDHENV 686
Query: 862 GACEASLDALVTLIE-GERLQNGSKVLEDANAIDRMVRFL-SSPSPKLQEKALDSVERIF 919
EA+L AL +L+E G ++ G K+L++A+ I ++ L + + +L +A+ VERI
Sbjct: 687 KVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAVWMVERIL 746
Query: 920 RLPEFKQKYGK--SAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 968
R+ + ++ + S LVD Q + + ++ L H++ + + SS F
Sbjct: 747 RIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIF 797
Score = 215 (80.7 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 79/300 (26%), Positives = 141/300 (47%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNL-----CPLTMTVLDTSILRPN 318
++F CP+T++VM DPV +G+TFER AIEKWF + + CPLT L ++ + +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 319 KTLRQSIEEWKDRNTMITIASMKPKLVSTEVE-EVLHCLEQLQDLCQQRDQHREWERLAN 377
LR +IEEW+ RN + + L E ++L L ++ +C+ +R R +
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 378 GDDAVESIVRSLGRRIEERKL-AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQ 436
+ +++S R+ + L + +++E + GD + LV S + ++
Sbjct: 145 LIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDT---VRTLVKFLSHEPSK 201
Query: 437 ASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRL-SAGPESVKM--RMATTLAEMELTD 493
A LL LS S+ ++ + LL L S+ E+V + + TL ME ++
Sbjct: 202 GREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSE 261
Query: 494 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVP-QNGLQMIKEGAVGP-LVD 551
+ L PLL + G + K +++ + L +P N ++++ VG LVD
Sbjct: 262 EIVRQMASYGRLQPLLGKLLEGSPETK-LSMASF--LGELPLNNDVKVLVAQTVGSSLVD 318
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 358 (131.1 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 154/547 (28%), Positives = 256/547 (46%)
Query: 242 REKEMKYFSKRKSLGSQPLEPLQSFYCPIT-RDVMVDPVETSSGQTFERSAIEKWFSDGN 300
RE K+F + + G QPL CPIT +++ + + S R+ IE+W + +
Sbjct: 52 REAIEKWFQECRENG-QPLS------CPITSKELSITDLSPSIAL---RNTIEEWRARND 101
Query: 301 NLC------PLTMTVLDTSILRPNKTLRQ---SIEEWKDRNTMITIASMKPKLVSTEVEE 351
L L + +T+IL K +R+ +I + + R + + ++ + E
Sbjct: 102 ALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHE 161
Query: 352 VLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEE-RKLAVALLLELSTCN 410
V C + LQ L + E + + D V +IV+ L + + R+ AV++L ELS
Sbjct: 162 V-RC-KALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSE 219
Query: 411 TLRDQIGDVQGCILLLVTMASSDDNQAS--RDAQELLENLSFSDDNVVQMAKANYFKHLL 468
L ++IG + G I+LLV + SS S A + L NL S++NV QMA + LL
Sbjct: 220 ALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLL 279
Query: 469 QRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALR 528
+L G K+ MA L + L + K + + V L+ L+ D+ ++ A+ AL
Sbjct: 280 AKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQ-TVGSSLIDLMRTRDMSQREAALGALN 338
Query: 529 NLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXR-EETATAIMHLAVSTMYQESSQTP 587
N+SS + +I G + PL+ R +E + I+ V+ Y + + P
Sbjct: 339 NISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSATILANIVNIGY-DFDKVP 397
Query: 588 V----TLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP-SAGNIKTTLTQCSAIP 642
V L S++ + L L + TGP +Q ++L L P S N+ + + +AI
Sbjct: 398 VGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAII 457
Query: 643 VLVQLCE-HDNENVRANAVKLFCCLVDDGDEAI---IREHVGQKCLETLVTIIQSSHNE- 697
LVQ E H+N+++R ++KL + E + +R VGQ L +LV+II +
Sbjct: 458 SLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVGQ--LGSLVSIISENTPTI 515
Query: 698 -EEIASAMGILSKLPEVPQ-FTQWLLDAGALPIVLNFLKNGRQNDPN--RFQ--VVENAV 751
EE A+A G+L++LPE T LL GA +++ + RQ + RF+ +E V
Sbjct: 516 TEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGEIRGIRFERTFLEGLV 575
Query: 752 GALRRFT 758
L R T
Sbjct: 576 SILARIT 582
Score = 243 (90.6 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 89/315 (28%), Positives = 154/315 (48%)
Query: 675 IREHVGQK-CLETLVTIIQSSHNEEEIASAMGILSKLPEVPQ-FTQWLLDAGALPIVLNF 732
+R VGQ L ++++ + EE+ A+A G+L++LPE T LL GA +++
Sbjct: 494 LRSTVGQLGSLVSIISENTPTITEEQAAAA-GLLAELPERDLVLTMRLLREGAFEKIISK 552
Query: 733 LKNGRQNDPN--RFQ--VVENAVGALRRFTAPTNLEWQKR--AAEAGVIPKLVQLLEYGT 786
+ RQ + RF+ +E V L R T E E + + LL+ +
Sbjct: 553 IVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNS 612
Query: 787 TLTKEHA-ATSLARFSKNSLGLSR----PIPKR--KGFWCFSPPPEI-G-CQVHGGLCGI 837
+ A AT+L S S L++ P P F C S PP + G C++H G+C +
Sbjct: 613 QDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSV 672
Query: 838 ESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIE-GERLQNGSKVLEDANAIDRM 896
SFCL+E AV LV +L+ + +L AL TL+E G + G +++++A+ I +
Sbjct: 673 RESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPI 732
Query: 897 VR-FLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQMP--LVDLTQRGNSSMKSLSAR 953
+ L + + L+ +A+ VERI R+ E ++ G+ + LVD Q + + ++ +
Sbjct: 733 LNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEK 792
Query: 954 VLAHLNVLQDQSSYF 968
L H++ + + S F
Sbjct: 793 ALRHIDKIPNFSGIF 807
Score = 208 (78.3 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 79/299 (26%), Positives = 138/299 (46%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSD----GNNL-CPLTMTVLDTSILRPN 318
++F CP+T+ VM +PV +GQTFER AIEKWF + G L CP+T L + L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 319 KTLRQSIEEWKDRNTMITIASMKPKLVSTEVE-EVLHCLEQLQDLCQQRDQHREWERLAN 377
LR +IEEW+ RN + + + L E +L L+ ++++C+ + R+ R+ N
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQ--RVCN 144
Query: 378 GDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQG-CILLLVTMASSDDNQ 436
V I L E + L++ + +G + +V S + ++
Sbjct: 145 -PQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSK 203
Query: 437 ASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRL-SAGPESVKM--RMATTLAEMELTD 493
A +L LS S+ ++ + LL L S+ E+V + TL +E ++
Sbjct: 204 GREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSE 263
Query: 494 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGP-LVD 551
+ + L PLL + G + K V++ + ++ N +++I VG L+D
Sbjct: 264 ENVRQMAINGRLQPLLAKLLEGSPETK-VSMAFYLGVLAL-NNDVKVIVAQTVGSSLID 320
Score = 60 (26.2 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 25/108 (23%), Positives = 48/108 (44%)
Query: 567 TATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP 626
+ATA+ +L++ + + T + L +FS L+ P V I + +C
Sbjct: 620 SATALENLSL----ESKNLTKIPELPPPTYCVSIFSC--LSKPPVVLGICKIHQGICSVR 673
Query: 627 SAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAI 674
+ L + A+ LV L +H+N+ V A+ L++DG + +
Sbjct: 674 ES----FCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVV 717
Score = 47 (21.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 642 PVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVG--QKCLETLVTIIQSSH-NEE 698
P+L L E+ EN+R AV + ++ E I RE VG Q LV Q++
Sbjct: 731 PILNVLLENRTENLRIRAVWMVERILRI--EEIARE-VGEEQNVTAALVDAFQNADFRTR 787
Query: 699 EIAS-AMGILSKLP 711
+IA A+ + K+P
Sbjct: 788 QIAEKALRHIDKIP 801
Score = 40 (19.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 58 KELNKRDLSHSEGLNSAIE---ILNREIK---GAKELTTECSKRNKVYLLMNCRAIVKRL 111
KEL+ DLS S L + IE N +K + L ++ N + L N R I + +
Sbjct: 76 KELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNI 135
Query: 112 KDTAREI 118
+ + +
Sbjct: 136 RKIRQRV 142
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 299 (110.3 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 99/400 (24%), Positives = 189/400 (47%)
Query: 16 SEALSQIVEAILEVMIASN-NVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSA 74
+ A +++ + E+ S+ + +KK + LA L+ +VP+ +E+ + + SE
Sbjct: 6 ASAAQSLIDVVNEIAAISDYRITVKKLCYN-LARRLKLLVPMFEEIRESNEPISEDTLKT 64
Query: 75 IEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLST 134
+ L + AK+ CS+ +K+YL+M + +L + + ++ Q+L +P LD+S
Sbjct: 65 LMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISD 124
Query: 135 DIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANHLLSLIADAVGIST 194
++ E++E V + E ++S + ++ D +L +A + +
Sbjct: 125 EVREQVELVLSQFRRAKGRVDVSDDELYEDLQS-LCNKSSDVDAYQPVLERVAKKLHLM- 182
Query: 195 ERSALKKEFDEFKSEIENSRMRKDQAEAVQ-MDQIIALLERADAASSPREKEMKYFSKRK 253
E L +E + +S D E ++ M ++ +++ +E K +
Sbjct: 183 EIPDLAQESVALHEMVASSG--GDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR 240
Query: 254 SLG------SQ--PLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPL 305
S G SQ P+ P F CPI+ ++M DPV SSGQT+ER+ IEKW G++ CP
Sbjct: 241 SNGQTSTAASQKIPVIP-DDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPK 299
Query: 306 TMTVLDTSILRPNKTLRQSIEEWKDRNTMITI---ASMKPKLVSTEVEEVLHCLEQLQDL 362
T L ++ L PN LR I +W + N + +S++P+ VS+ +++DL
Sbjct: 300 TQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAE--ANKIEDL 357
Query: 363 CQQRDQ-HREWERLANGDDAVESIVRSLGRRIEERKLAVA 401
+ + E +R A G+ +R L +R + ++A+A
Sbjct: 358 MWRLAYGNPEDQRSAAGE------IRLLAKRNADNRVAIA 391
Score = 134 (52.2 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 71/287 (24%), Positives = 134/287 (46%)
Query: 696 NEEEIASAMGILSKLPEVPQFTQWLL-DAGALPIVLNFLKNGRQNDPNRFQVVENAVGAL 754
N E+ SA G + L + + + +AGA+P+++ L P+ ++ E++V AL
Sbjct: 365 NPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLST-----PDS-RIQEHSVTAL 418
Query: 755 RRFTAPTNLEWQKRA-AEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPK 813
+ N K A AG IP +VQ+L+ G+ +E+AA +L FS + + ++
Sbjct: 419 LNLSICEN---NKGAIVSAGAIPGIVQVLKKGSMEARENAAATL--FSLSVIDENKVTIG 473
Query: 814 RKGFWCFSPPPEIGCQVHGGLCGIESS------FCLLEAN---AVR----P-LVRVLEDP 859
G + PP + G G + + C+ + N A+R P L R+L +P
Sbjct: 474 ALG----AIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEP 529
Query: 860 DHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIF 919
G + +L A++ ++ G ++ ++A+ +V F+ + SP+ +E A + +
Sbjct: 530 GSGMVDEAL-AILAILSSH--PEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC 586
Query: 920 RL-PEFKQKYGKSAQM-PLVDLTQRGNSSMKSLSARVLAHLNVLQDQ 964
P+ + K M PL+DL G K +A++L ++ L +Q
Sbjct: 587 SGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQ 633
Score = 129 (50.5 bits), Expect = 0.00018, P = 0.00018
Identities = 70/288 (24%), Positives = 126/288 (43%)
Query: 282 SSGQTFERSAIEKWFSDGNNLCPLTMTVL-DTSILRPNKTL-RQSIEEWKDRNTMITIAS 339
S+GQT ++ + + CP+++ ++ D I+ +T R IE+W + T
Sbjct: 241 SNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHS-TCPK 299
Query: 340 MKPKLVSTEVEE--VLHCLEQLQDLCQQRD----------QHREWERLANGDDA--VESI 385
+ L ST + VL L + C+ D + R+ ++ +A +E +
Sbjct: 300 TQQALTSTTLTPNYVLRSL--IAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDL 357
Query: 386 VRSL--GRRIEERKLA--VALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDA 441
+ L G ++R A + LL + + N R I + G I LLV + S+ D++ +
Sbjct: 358 MWRLAYGNPEDQRSAAGEIRLLAKRNADN--RVAIAEA-GAIPLLVGLLSTPDSRIQEHS 414
Query: 442 QELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLE 501
L NLS ++N + A ++Q L G + A TL + + D +K ++
Sbjct: 415 VTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGA 474
Query: 502 GNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPL 549
+ PL+ L++ G + KK A AL NL N + I+ G + L
Sbjct: 475 LGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTL 522
Score = 127 (49.8 bits), Expect = 0.00029, P = 0.00029
Identities = 80/341 (23%), Positives = 133/341 (39%)
Query: 268 CPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEE 327
CP T+ + T + RS I +W + N++ P S LRP K S
Sbjct: 297 CPKTQQALTSTTLTPNYVL--RSLIAQW-CEANDIEPPK----PPSSLRPRKV--SSFSS 347
Query: 328 WKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVR 387
+ N I + +L E+ +++ L ++ +R A + ++
Sbjct: 348 PAEANK---IEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLS 404
Query: 388 SLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLEN 447
+ RI+E +V LL LS C + I G I +V + +A +A L +
Sbjct: 405 TPDSRIQEH--SVTALLNLSICENNKGAIVSA-GAIPGIVQVLKKGSMEARENAAATLFS 461
Query: 448 LSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGP 507
LS D+N V + L+ L+ G + K AT L + + +K + V+
Sbjct: 462 LSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPT 521
Query: 508 LLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREET 567
L L++ M A+ L LSS P+ + AV LV+ RE
Sbjct: 522 LTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRN---RENA 578
Query: 568 ATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTG 608
A ++HL S P L+E+ K + ++ LI+L G
Sbjct: 579 AAVLVHLC--------SGDPQHLVEAQK-LGLMGPLIDLAG 610
Score = 112 (44.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 46/219 (21%), Positives = 90/219 (41%)
Query: 453 DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLV 512
DN V +A+A L+ LS ++ T L + + +++K +++ + ++ ++
Sbjct: 385 DNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVL 444
Query: 513 SRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIM 572
+G ++ ++ A L +LS + +N + + GA+ PLV +++ ATA+
Sbjct: 445 KKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLV---VLLNEGTQRGKKDAATALF 501
Query: 573 HLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIK 632
+L + YQ + + I L L+ G + L L P K
Sbjct: 502 NLCI---YQGNKGKAIRA----GVIPTLTRLLTEPGSGMVDEALAILAILSSHPEG---K 551
Query: 633 TTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGD 671
+ A+P LV+ + R NA + L GD
Sbjct: 552 AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCS-GD 589
Score = 66 (28.3 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 49/207 (23%), Positives = 83/207 (40%)
Query: 770 AEAGVIPKLVQLLEYGTTLTKEHAATSLARFSK----NSLGLSRP--IPKRKGFWCFSPP 823
AEA I L+ L YG + AA + +K N + ++ IP G
Sbjct: 349 AEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLS---T 405
Query: 824 PEIGCQVHGGLCGIESSFC------LLEANAVRPLVRVLEDPDHGACEASLDALVTLIEG 877
P+ Q H + S C ++ A A+ +V+VL+ G+ EA +A TL
Sbjct: 406 PDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKK---GSMEARENAAATLFSL 462
Query: 878 ERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQMPLV 937
+ + AI +V L+ + Q D+ +F L ++ GK+ + ++
Sbjct: 463 SVIDENKVTIGALGAIPPLVVLLNEGT---QRGKKDAATALFNLCIYQGNKGKAIRAGVI 519
Query: 938 D-----LTQRGNSSMKSLSARVLAHLN 959
LT+ G S M + +LA L+
Sbjct: 520 PTLTRLLTEPG-SGMVDEALAILAILS 545
Score = 64 (27.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 369 HREWERLANGDDAVESIVRSLGRRI-EERKLAVALLLELSTCNTLRDQIGDVQGCILL-- 425
H E + + DAV S+V + R+ A A+L+ L C+ + + Q L+
Sbjct: 547 HPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHL--CSGDPQHLVEAQKLGLMGP 604
Query: 426 LVTMASSDDNQASRDAQELLENLS 449
L+ +A + ++ R A +LLE +S
Sbjct: 605 LIDLAGNGTDRGKRKAAQLLERIS 628
Score = 54 (24.1 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 22/116 (18%), Positives = 46/116 (39%)
Query: 421 GCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKM 480
G I L + + + +A +L LS + + ++ L++ + G +
Sbjct: 517 GVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRE 576
Query: 481 RMATTLAEMELTD-HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
A L + D H + ++GPL+ L G + K+ A + L +S + +
Sbjct: 577 NAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAE 632
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 335 (123.0 bits), Expect = 7.0e-27, P = 7.0e-27
Identities = 138/548 (25%), Positives = 240/548 (43%)
Query: 17 EALSQIVEAILEVMIASNNV--LIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSA 74
E L + +I+E + N +KE F L L+ ++P L E+ + S
Sbjct: 51 EGLVSDIVSIVEFLDQINGYRRTQQKECFN-LVRRLKILIPFLDEIRGFE---SPSCKHF 106
Query: 75 IEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLST 134
+ L + AK+L CS +K+Y+ ++ ++ R ++++ L P L +S
Sbjct: 107 LNRLRKVFLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISG 166
Query: 135 DIIEEIEKVCDNMQXXXXXXXXXX---XXXLEKVESGIQERNVDRSYANHLLS-LIADAV 190
D +EI+ +C ++ + V S RN D + L L +
Sbjct: 167 DAKDEIDSLCKQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTI 226
Query: 191 G-ISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYF 249
+ TE A++ + K + N ++ E + + + LE D P K
Sbjct: 227 DDLKTETIAIQSLIQD-KGGL-NIETKQHIIELLNKFKKLQGLEATDILYQPVIN--KAI 282
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
+K SL + P F CPIT ++M+DPV ++GQT+E+ +I+KWF G+ CP T
Sbjct: 283 TKSTSL----ILP-HEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQE 337
Query: 310 LDTSILRPNKTLRQSIEEWKDRNTM-ITIASMKPKLVSTEVEEVLHCLEQLQD--LCQQR 366
LD L PN L+ I +W ++N I + P + + +EV +E L L +QR
Sbjct: 338 LDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQR 397
Query: 367 DQHREWERLA--NGDD--------AVESIVRSLG---RRIEERKLAVALLLELSTCNTLR 413
++ LA N ++ A+ +V+ L I+E AV LL LS +
Sbjct: 398 RSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQEN--AVTTLLNLSIDEVNK 455
Query: 414 DQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSA 473
I + +G I ++ + + + +A ++ L +LS D+N V + +N L+ L
Sbjct: 456 KLISN-EGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQH 514
Query: 474 GPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSV 533
G K T L + L +K ++ ++ PLL+L+ ++ M A+ L L+S
Sbjct: 515 GTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASH 574
Query: 534 PQNGLQMI 541
P+ G Q I
Sbjct: 575 PE-GRQAI 581
Score = 169 (64.5 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 63/258 (24%), Positives = 117/258 (45%)
Query: 302 LCPLTMTV-LDTSILRPNKTL-RQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQL 359
LCP+T+ + LD I+ +T ++SI++W D T + +L + +
Sbjct: 295 LCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHK-TCPKTRQELDHLSLAPNFALKNLI 353
Query: 360 QDLCQQRD---QHREWERLANGD--DAVESIVRSLGR-RIEERKLAVALLLELSTCNTLR 413
C++ + +E + + D V +V +L ++EE++ +V + L+ N
Sbjct: 354 MQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPEN 413
Query: 414 DQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSA 473
+ G I LLV + S D+ +A L NLS + N ++ ++++ L
Sbjct: 414 RVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILEN 473
Query: 474 GPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSV 533
G + A L + + D +K ++ N + PL+ L+ G ++ KK A+ AL NLS
Sbjct: 474 GNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLN 533
Query: 534 PQNGLQMIKEGAVGPLVD 551
N + I G V PL++
Sbjct: 534 SANKGRAIDAGIVQPLLN 551
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 235 (87.8 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 76/295 (25%), Positives = 142/295 (48%)
Query: 50 LERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECS-KRNKVYLLMNCRAIV 108
L+ + P+L E+ + + L E L+ + A+E + S K +K++ + C ++
Sbjct: 41 LKLLKPLLDEVVDCKIPSDDCLYKGCEDLDSVVNQAREFLEDWSPKLSKLFGVFQCEVLL 100
Query: 109 KRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESG 168
+++ + EIS+ L L L+ T ++ +E+ + +E +E+
Sbjct: 101 GKVQTCSLEISRIL--LQLSQSSPVTSSVQSVERCVQETESFKQEGTL-----MELMENA 153
Query: 169 IQERNVDRSYA--NHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMD 226
++ + D + NHL S+I +G+ + + LK+ K I S+ K + + Q +
Sbjct: 154 LRNQKDDITSLDNNHLESII-QMLGLISNQDLLKESITVEKERIR-SQASKSEEDMEQTE 211
Query: 227 QIIALLERADAASSPREKEMK--YFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSG 284
Q+I L+ RE +K + K + P F CP++ ++M+DPV +SG
Sbjct: 212 QLIELV------LCIREHMLKTEFLEVAKGISIPPY-----FRCPLSTELMLDPVIVASG 260
Query: 285 QTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIAS 339
QTF+R++I+KW +G +CP T VL L PN T++ I W + N I +A+
Sbjct: 261 QTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMIASWLEANR-INLAT 314
Score = 139 (54.0 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 50/174 (28%), Positives = 81/174 (46%)
Query: 381 AVESIVRSLGRRIEERKL-AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASR 439
A+E +V L + K + A L LS R++IG I LV + + +
Sbjct: 556 AIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKK 615
Query: 440 DAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASL 499
DA L NLS + DN ++ +A K+L++ L E V +A LA + + ++
Sbjct: 616 DAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVAL-LANLSAVGEGRQAI 674
Query: 500 L-EGNVLGPLL-HLVSRGDIQMKKVAVKALRNLS-SVPQNGLQMIKEGAVGPLV 550
+ EG + PLL V G + K+ A L L + P+ +++EGA+ PLV
Sbjct: 675 VREGGI--PLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLV 726
Score = 129 (50.5 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 65/281 (23%), Positives = 117/281 (41%)
Query: 385 IVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQ-GCILLLVTMASSDDNQASRDAQE 443
+V L + K A A + T N++ +++ + G I L+++ S++ A
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 444 LLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGN 503
L NLS S+ N + + + L+ L+ G + K A +L + + ++ + + N
Sbjct: 537 ALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSN 596
Query: 504 V-LGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXX 562
+ L++L+ +G + KK A AL NLS N ++++ AV LV+
Sbjct: 597 AAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDL----- 651
Query: 563 XREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNAL 622
E A+ LA + E Q V + I +L ++L ++ L
Sbjct: 652 --EMVDKAVALLANLSAVGEGRQAIVR----EGGIPLLVETVDLGSQRGKENAASVLLQL 705
Query: 623 C-RSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKL 662
C SP T + Q AIP LV L + + + A +L
Sbjct: 706 CLNSPK---FCTLVLQEGAIPPLVALSQSGTQRAKEKAQQL 743
Score = 102 (41.0 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 47/245 (19%), Positives = 112/245 (45%)
Query: 426 LVTMASSDDNQASRDAQELLENLSFSD-DNVVQMAKANYFKHLLQRLSAGPESVKMRMAT 484
LV S N+ A + +L+ + +N V + + LL L + + + T
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
L + +++ +KA ++E + PL+H+++ G+ + K+ + +L +LS + N ++ +
Sbjct: 537 ALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSN 596
Query: 545 A-VGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSL 603
A + LV+ +++ A+A+ +L+++ ++ + ++ K L
Sbjct: 597 AAIQALVNLLGKGTFRG---KKDAASALFNLSIT----HDNKARIVQAKAVKY------L 643
Query: 604 INLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANA--VK 661
+ L P+++ + + L + G + + + IP+LV+ + ++ + NA V
Sbjct: 644 VELLDPDLEM-VDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVL 702
Query: 662 LFCCL 666
L CL
Sbjct: 703 LQLCL 707
Score = 93 (37.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 46/178 (25%), Positives = 81/178 (45%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRAN-AVKLFCCLVDDGDEAIIREHVGQK--CLETLV 688
K + + AI LV + N+ + N A LF V + RE +GQ ++ LV
Sbjct: 548 KAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQ----VNRERIGQSNAAIQALV 603
Query: 689 TIIQSS--HNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQV 746
++ +++ ASA+ LS + ++ A A+ ++ L DP+ ++
Sbjct: 604 NLLGKGTFRGKKDAASALFNLSITHDNKAR---IVQAKAVKYLVELL------DPD-LEM 653
Query: 747 VENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNS 804
V+ AV L +A E ++ G IP LV+ ++ G+ KE+AA+ L + NS
Sbjct: 654 VDKAVALLANLSAVG--EGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNS 709
Score = 93 (37.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 74/326 (22%), Positives = 134/326 (41%)
Query: 651 DNENVRANAVKLFCCLVDDGDEA--IIREHVGQKCLETLVTIIQSSHNEEEIASAMGILS 708
+N N +A K + C V D D++ + H + LV ++S N+ + A+A I
Sbjct: 444 NNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIK-----LVEDLKSGSNKVKTAAAAEIRH 498
Query: 709 KLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKR 768
+ + GA+ +L+ L ++ Q E+AV AL + + L +
Sbjct: 499 LTINSIENRVHIGRCGAITPLLSLL----YSEEKLTQ--EHAVTALLNLSI-SELN-KAM 550
Query: 769 AAEAGVIPKLVQLLEYGTTLTKEHAATSLARFS-----KNSLGLS----RPIPKRKGFWC 819
E G I LV +L G KE++A SL S + +G S + + G
Sbjct: 551 IVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGT 610
Query: 820 FSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGER 879
F + + ++ +++A AV+ LV +L DPD + ++ L L
Sbjct: 611 FRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANL---SA 666
Query: 880 LQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI-FRLPEF-KQKYGKSAQMPLV 937
+ G + + I +V + S + +E A + ++ P+F + A PLV
Sbjct: 667 VGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLV 726
Query: 938 DLTQRGNSSMKSLSARVLAHLNVLQD 963
L+Q G K + ++L+H +D
Sbjct: 727 ALSQSGTQRAKEKAQQLLSHFRNQRD 752
Score = 84 (34.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 639 SAIPVLVQLCEHDNENVRANAVK-LFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNE 697
+AI LV L + +A LF + ++A I V K ++ LV ++ +
Sbjct: 597 AAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARI---VQAKAVKYLVELLDP--DL 651
Query: 698 EEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRF 757
E + A+ +L+ L V + Q ++ G +P+++ + G Q ENA L +
Sbjct: 652 EMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGK------ENAASVLLQL 705
Query: 758 TAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARF 800
+ ++ + G IP LV L + GT KE A L+ F
Sbjct: 706 CL-NSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHF 747
Score = 84 (34.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 40/174 (22%), Positives = 77/174 (44%)
Query: 373 ERLANGDDAVESIVRSLGR-RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMAS 431
ER+ + A++++V LG+ +K A + L LS + + +I + + LV +
Sbjct: 590 ERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKA-VKYLVELLD 648
Query: 432 SDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMEL 491
D + A LL NLS + + + L++ + G + K A+ L ++ L
Sbjct: 649 PDLEMVDK-AVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCL 707
Query: 492 TDHHKASL-LEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
+L L+ + PL+ L G + K+ A + L + + Q +M K+G
Sbjct: 708 NSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRN--QRDARM-KKG 758
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 181 (68.8 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 55/179 (30%), Positives = 89/179 (49%)
Query: 375 LANGDDAVESIVRSL-GRRIEERKLAVALLLELSTCNT-LRDQIGDVQGCILLLVTMASS 432
L+ + V+ +V L ++ ++ A A L L+ N R IG+ G I+LLV + S
Sbjct: 539 LSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGN-SGAIVLLVELLYS 597
Query: 433 DDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELT 492
D+ +A L NLS +D+N +A A + L+ L G K A TL + +
Sbjct: 598 TDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVI 657
Query: 493 DHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
+ +K + + +GPL+ L+ G + KK A AL NLS +N +++ GAV L+D
Sbjct: 658 EENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID 716
Score = 174 (66.3 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 182 LLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSP 241
+L I + G+ + + L E + + E + ++ AE +DQ+I ++ R
Sbjct: 164 ILVKIGENTGLRSNQEILI-EAVALERQKEMAEQSENNAEVEFLDQLIVIVNRMH----- 217
Query: 242 REKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNN 301
E K+ S + L F+CP++ +VM DPV SSGQT+E++ I++W G
Sbjct: 218 ---ERLLLIKQTQTSSVAI--LADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLK 272
Query: 302 LCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQL 359
+CP T L + L PN T++ I W + N + + E+ +L C + +
Sbjct: 273 VCPKTRQTLTHTTLIPNYTVKALIANWCETND-VKLPDPNKSTSLNELSPLLSCTDSI 329
Score = 116 (45.9 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 47/173 (27%), Positives = 75/173 (43%)
Query: 381 AVESIVRSLGRRIEERKL-AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASR 439
A+E ++ L E K + A L LS + +IG G I LV + + + +
Sbjct: 628 AIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQ-SGAIGPLVDLLGNGTPRGKK 686
Query: 440 DAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASL 499
DA L NLS +N + ++ ++L+ + V +A + + A
Sbjct: 687 DAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIG 746
Query: 500 LEGNVLGPLL-HLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI-KEGAVGPLV 550
EG + PLL +V G + K+ A AL LS+ M+ +EGAV PLV
Sbjct: 747 QEGGI--PLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLV 797
Score = 109 (43.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 846 ANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSP 905
+ A+ LV +L D E ++ AL+ L + N K + DA AI+ ++ L + S
Sbjct: 585 SGAIVLLVELLYSTDSATQENAVTALLNLSIND---NNKKAIADAGAIEPLIHVLENGSS 641
Query: 906 KLQEKALDSVERIFRLPEFKQKYGKSAQM-PLVDLTQRGNSSMKSLSARVLAHLNVLQDQ 964
+ +E + ++ + + E K K G+S + PLVDL G K +A L +L++ Q+
Sbjct: 642 EAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQEN 701
Query: 965 SS 966
+
Sbjct: 702 KA 703
Score = 100 (40.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 54/213 (25%), Positives = 97/213 (45%)
Query: 597 IFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVR 656
I +L L+ T Q+ + AL N K + AI L+ + E+ + +
Sbjct: 588 IVLLVELLYSTDSATQENAV---TALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAK 644
Query: 657 AN-AVKLFCCLVDDGDEAIIREHVGQK-CLETLVTIIQSS--HNEEEIASAMGILSKLPE 712
N A LF V + ++ I+ +GQ + LV ++ + +++ A+A+ LS E
Sbjct: 645 ENSAATLFSLSVIEENK--IK--IGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQE 700
Query: 713 VPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRF-TAPTNLEWQKRAAE 771
++ +GA+ +++ + DP +V+ AV L T P E + +
Sbjct: 701 NKAM---IVQSGAVRYLIDLM------DPAA-GMVDKAVAVLANLATIP---EGRNAIGQ 747
Query: 772 AGVIPKLVQLLEYGTTLTKEHAATSLARFSKNS 804
G IP LV+++E G+ KE+AA +L + S NS
Sbjct: 748 EGGIPLLVEVVELGSARGKENAAAALLQLSTNS 780
Score = 92 (37.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 52/217 (23%), Positives = 92/217 (42%)
Query: 756 RFTAPTNLEWQKRAAEAGVIPKLVQLLEYGT-TLTKEHAATSLARFSKNS--------LG 806
R A N++ + +G I LV+LL Y T + T+E+A T+L S N G
Sbjct: 569 RLLAKHNMDNRIVIGNSGAIVLLVELL-YSTDSATQENAVTALLNLSINDNNKKAIADAG 627
Query: 807 LSRPIPK--RKGFWCFSPPPEIGCQVHGGLCGIESSFCLL-EANAVRPLVRVLEDPDHGA 863
P+ G S E L IE + + ++ A+ PLV +L +G
Sbjct: 628 AIEPLIHVLENGS---SEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLL---GNGT 681
Query: 864 CEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPE 923
DA L Q ++ + A+ ++ L P+ + +KA+ + + +PE
Sbjct: 682 PRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LMDPAAGMVDKAVAVLANLATIPE 740
Query: 924 FKQKYGKSAQMPL-VDLTQRGNSSMKSLSARVLAHLN 959
+ G+ +PL V++ + G++ K +A L L+
Sbjct: 741 GRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLS 777
Score = 86 (35.3 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 66/277 (23%), Positives = 115/277 (41%)
Query: 465 KHLLQRLSAGPESVKMRMATTLAEMELTDHHKAS--LLEGN--VLGPLLHLVSRGDIQMK 520
K L++ L + + R AT AE+ L H ++ GN + L+ L+ D +
Sbjct: 547 KKLVEELKSSSLDTQ-RQAT--AELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQ 603
Query: 521 KVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMY 580
+ AV AL NLS N + GA+ PL+ +E +A + L+V
Sbjct: 604 ENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEA---KENSAATLFSLSV---I 657
Query: 581 QESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSA 640
+E+ + + +S + L++L G + AL K + Q A
Sbjct: 658 EENK---IKIGQSGA----IGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGA 710
Query: 641 IPVLVQLCEHDNENV-RANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEE 699
+ L+ L + V +A AV + +G AI +E G L +V + S+ +E
Sbjct: 711 VRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVEL-GSARGKEN 768
Query: 700 IASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNG 736
A+A+ LS +F +L GA+P ++ ++G
Sbjct: 769 AAAALLQLST--NSGRFCNMVLQEGAVPPLVALSQSG 803
Score = 77 (32.2 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 843 LLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSS 902
+ +A A+ PL+ VLE+ G+ EA ++ TL ++ + + AI +V L +
Sbjct: 623 IADAGAIEPLIHVLEN---GSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGN 679
Query: 903 PSPKLQEKALDSVERIFRLPEFKQKYGKSAQMP-LVDLTQRGNSSMKSLSARVLAHLNVL 961
+P+ ++ A ++ + E K +S + L+DL + M + VLA+L +
Sbjct: 680 GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPA-AGMVDKAVAVLANLATI 738
Query: 962 QD 963
+
Sbjct: 739 PE 740
Score = 65 (27.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 37/220 (16%), Positives = 95/220 (43%)
Query: 22 IVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNK----RDLSHSEGLNSAIEI 77
++ +I + S++ I + F++ +E ++ VLK + D E L A E
Sbjct: 7 LLRSISSFLNLSSSKHIDLDPFEKYYKRVEELLRVLKPIADVVVTSDFVFDEKLGKAFEE 66
Query: 78 LNREIKGAKELTTECSK-RNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDI 136
L +++ + +L +KVY ++ +++ +++DT + Q L ++S + D
Sbjct: 67 LTQDVDQSIDLFRSWQAFSSKVYFVLQIESLLPKMRDTIVDTFQFL----MSSKNHLPDE 122
Query: 137 IE--EIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANHLLSLIADAVGIST 194
+ +E+ + ++ ++ ++++ + +L I + G+ +
Sbjct: 123 LSPASLEQCLEKIKHLSYEEISSV------IDGALRDQRDGVGPSPEILVKIGENTGLRS 176
Query: 195 ERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLER 234
+ L E + + E + ++ AE +DQ+I ++ R
Sbjct: 177 NQEILI-EAVALERQKEMAEQSENNAEVEFLDQLIVIVNR 215
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 399 AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELL 445
A A LL+LST + + +G + LV ++ S +A AQ LL
Sbjct: 769 AAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 350 EEVLHCLEQL-QDLCQQRDQHREWERLAN 377
E++ E+L QD+ Q D R W+ ++
Sbjct: 58 EKLGKAFEELTQDVDQSIDLFRSWQAFSS 86
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 255 (94.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 98/403 (24%), Positives = 182/403 (45%)
Query: 46 LAAYLERIVPVLKELNKRDLSHSEGLNS--AIEILNREIKGAKELTTECSKRNKVYLLMN 103
L+ + + P ++EL +R EG A+ L ++ A L + +++ L++
Sbjct: 56 LSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLRLGREGSRISLVLE 115
Query: 104 CRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLE 163
+++K+ + ++ QAL +P LD+S ++ E++E V ++
Sbjct: 116 RDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYN 175
Query: 164 KVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAV 223
+ S + ++N D S +L +++ + + T ++ E+ S +D E +
Sbjct: 176 DLLS-VYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLA--LHEMVASGGGQDPGEHI 232
Query: 224 Q-MDQIIALLERADAASSPREKEMKYFSKRKSLG-SQPLEPLQSFYCPITRDVMVDPVET 281
+ M ++ ++ +P S G S+P+ F CPI+ ++M DPV
Sbjct: 233 ERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIV 292
Query: 282 SSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMI----TI 337
S+GQT+ER+ IEKW + G++ CP T + TS L PN LR I +W + N M +
Sbjct: 293 STGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRST 352
Query: 338 ASMKPKLVSTEVEEV-LHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEER 396
KP + E + L L LC E +R A + + + R+ RI
Sbjct: 353 QPNKPTPACSSSERANIDAL--LSKLCSP---DTEEQRSAAAELRLLA-KRNANNRICIA 406
Query: 397 KL-AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS 438
+ A+ LLL L + + LR Q + + L+ ++ +DN+AS
Sbjct: 407 EAGAIPLLLSLLSSSDLRTQ----EHAVTALLNLSIHEDNKAS 445
Score = 125 (49.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 46/158 (29%), Positives = 70/158 (44%)
Query: 394 EERKLAVAL-LLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSD 452
E+R A L LL N R I + G I LL+++ SS D + A L NLS +
Sbjct: 383 EQRSAAAELRLLAKRNANN-RICIAEA-GAIPLLLSLLSSSDLRTQEHAVTALLNLSIHE 440
Query: 453 DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLV 512
DN + + ++ L G + A TL + + D +K ++ + L+ L+
Sbjct: 441 DNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLL 500
Query: 513 SRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
G + KK A AL NL N + I+ G V PL+
Sbjct: 501 GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLV-PLI 537
Score = 82 (33.9 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 46/174 (26%), Positives = 72/174 (41%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVK-LF-CCLVDDGDEAIIREHVGQKCLETLVT 689
K T+ AIP LV L ++ + +A LF C+ IR G L L+
Sbjct: 484 KVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIR--AG---LVPLIM 538
Query: 690 IIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVEN 749
+ ++ + AM ILS L P+ + A +P+++ + +G NR EN
Sbjct: 539 GLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPR--NR----EN 592
Query: 750 AVGALRRF-TAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSK 802
A + + +L RA E G++ L +L GT K A L R S+
Sbjct: 593 AAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
Score = 50 (22.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 14 PASEALSQIVEAILEVMIASNNV--LIKKES-FKELAAYLERIVPVLKELNKRDLSHSEG 70
P ++AL + A+L + + + +++++S K+ + ++ L ++ +L S+
Sbjct: 89 PLADALEAAL-ALLRLGREGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDE 147
Query: 71 LNSAIEILNREIKGAKE 87
+ +E+++ ++K AKE
Sbjct: 148 VREQVELVHAQLKRAKE 164
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 245 (91.3 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 83/332 (25%), Positives = 158/332 (47%)
Query: 2 MALDVVTSASTVPASEALSQIVEAILEVMIASNNV-LIKKESFKELAAYLERIVPVLKEL 60
++ D + S AS +S + L ++ N++ LI+K K LA+ + ++ +L
Sbjct: 27 LSSDTKLTRSLFLASHEISSMQP--LPFILRRNSLSLIRK--VKILASVFDELLLPRSQL 82
Query: 61 NKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQ 120
+ +S+ + E + ++ K L +CS+ +K++LL+ + + ++S
Sbjct: 83 ----VVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNFHELVTDLST 138
Query: 121 ALGILPLASLDLSTD---IIEEIEKVC-DNMQXXXXXXXXXXXXXLEKVESGIQERNVDR 176
L ILPL DLS D +I + K C D++Q + + +GI+ + +
Sbjct: 139 VLDILPLHDFDLSDDAQDLISLLTKQCSDSVQFVDARDVALRRKVTDTI-AGIKHQ-ISP 196
Query: 177 SYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERAD 236
++ L+ + D +G+S + ++L E + EI++ + ++ A + I L+ +
Sbjct: 197 DHST-LIKIFND-LGLS-DSASLTDEIQRLEDEIQDQIDDRSKSAAASL---IGLVRYSK 250
Query: 237 AASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWF 296
F + +SL + P F CPIT ++M DPV ++GQT++R +I+ W
Sbjct: 251 CVLYGPSTPAPDFRRHQSLSDANI-PAD-FRCPITLELMRDPVVVATGQTYDRESIDLWI 308
Query: 297 SDGNNLCPLTMTVLDTSILRPNKTLRQSIEEW 328
G+N CP T VL + L PN+ L+ I W
Sbjct: 309 QSGHNTCPKTGQVLKHTSLVPNRALKNLIVLW 340
Score = 89 (36.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 31/130 (23%), Positives = 72/130 (55%)
Query: 842 CLLEANAVRPLVRVLEDPDHGACEA-SLDALVTLIEGERL-QNGSKVLEDANAIDRMVRF 899
C+ EA A+ LVR L C + ++A+ T++ L QN ++++E A++ ++
Sbjct: 404 CIAEAGAIPKLVRYLATE----CPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEV 459
Query: 900 LSSPSP-KLQEKALDSVERIFRLPEFKQKYGKSAQMP--LVDLTQRGNSSMKSLSARVLA 956
L S + + + A ++ + + ++++ G+ A++ LVDL ++G +S K + ++A
Sbjct: 460 LRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDA--LVA 517
Query: 957 HLNVLQDQSS 966
LN++ ++ +
Sbjct: 518 ILNLVAEREN 527
Score = 69 (29.3 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 337 IASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEER 396
+A+ P L V +L+ L L Q + + E + NG V ++RS G E +
Sbjct: 418 LATECPSLQINAVTTILN----LSILEQNKTRIMETDGALNG---VIEVLRS-GATWEAK 469
Query: 397 KLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVV 456
A A L L+ + R ++G + LV +A + RDA + NL +NV
Sbjct: 470 ANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVG 529
Query: 457 QMAKA 461
+ +A
Sbjct: 530 RFVEA 534
Score = 54 (24.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 31/144 (21%), Positives = 60/144 (41%)
Query: 579 MYQESSQTPVTLLESDKEIFMLFS-LINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQ 637
+Y + P E+ + M+ S LI ++ AL +S + + + +
Sbjct: 350 LYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFELRALAKSDTVA--RACIAE 407
Query: 638 CSAIPVLVQLCEHDNENVRANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTIIQSSHN 696
AIP LV+ + +++ NAV L + + ++ I E G L ++ +++S
Sbjct: 408 AGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDG--ALNGVIEVLRSGAT 465
Query: 697 EEEIASAMGILSKLPEVPQFTQWL 720
E A+A L L V + + L
Sbjct: 466 WEAKANAAATLFSLAGVSAYRRRL 489
Score = 52 (23.4 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 22/97 (22%), Positives = 46/97 (47%)
Query: 458 MAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLE--GNVLGPLLHLVSRG 515
+A+A L++ L+ S+++ TT+ + + + +K ++E G + G + L S
Sbjct: 405 IAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGA 464
Query: 516 DIQMKKVAVKALRNLSSVPQNGLQMIKEG-AVGPLVD 551
+ K A L +L+ V ++ ++ V LVD
Sbjct: 465 TWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVD 501
Score = 51 (23.0 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 770 AEAGVIPKLVQLLEYGTTLTKEHAATSLARFS 801
AEAG IPKLV+ L + +A T++ S
Sbjct: 406 AEAGAIPKLVRYLATECPSLQINAVTTILNLS 437
Score = 46 (21.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 17/86 (19%), Positives = 43/86 (50%)
Query: 467 LLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKA 526
L+++LS + + LA+ + +A + E + L+ ++ ++ AV
Sbjct: 375 LIEKLSVADSNGVVFELRALAKSDTVA--RACIAEAGAIPKLVRYLATECPSLQINAVTT 432
Query: 527 LRNLSSVPQNGLQMIK-EGAVGPLVD 551
+ NLS + QN ++++ +GA+ +++
Sbjct: 433 ILNLSILEQNKTRIMETDGALNGVIE 458
Score = 39 (18.8 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 308 TVLDTSILRPNKT 320
T+L+ SIL NKT
Sbjct: 432 TILNLSILEQNKT 444
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 191 (72.3 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 42/97 (43%), Positives = 57/97 (58%)
Query: 247 KYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
K + RKS G P+ P + CPI+ +M DPV +SGQT+ER IEKWFSDG+N CP T
Sbjct: 262 KPMNSRKS-GQMPIPP-EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKT 319
Query: 307 MTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPK 343
L L PN ++ I W ++N IT+ + P+
Sbjct: 320 QQQLPHLSLTPNYCVKGLIASWCEQNG-ITVPTGPPE 355
Score = 97 (39.2 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 37/154 (24%), Positives = 62/154 (40%)
Query: 399 AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQM 458
A AL L LS + IG Q + + Q DA L NLS N+ +
Sbjct: 530 ATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTL 589
Query: 459 AKANYFKHLLQRLSAGPES-VKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDI 517
+N K L S G ++ +A L + + + ++ L ++ GD
Sbjct: 590 LSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDT 649
Query: 518 QMKKVAVKALRNLSSVPQNGLQMI-KEGAVGPLV 550
++ AV L L + ++ +QM+ +EG + LV
Sbjct: 650 VEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLV 683
Score = 89 (36.4 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 42/208 (20%), Positives = 92/208 (44%)
Query: 23 VEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREI 82
V + E + A+++ + + KEL+A +++ + L + G+ + L+ +
Sbjct: 3 VSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCS-LHIAL 61
Query: 83 KGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQAL----GILPLASLDLSTDIIE 138
+ AK + CS+ +K+YL + A++ + + + +L I+P + DI+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVG 121
Query: 139 EIEK---VCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSY-ANHLLSLIADAVGIST 194
E+E + D + +K ++G ++ + A LS+ + ++
Sbjct: 122 ELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALA- 180
Query: 195 ERSALKKEFDEFKSEIENSRMRKDQAEA 222
ER ALKK D ++ +E + RK+ A
Sbjct: 181 ERRALKKVID--RARVEEDK-RKESIVA 205
Score = 57 (25.1 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 23/89 (25%), Positives = 40/89 (44%)
Query: 631 IKTTLTQCS--AIPVLVQLCEHDNENV----RANAVKLFCCLVDDGDEAIIREHVGQKCL 684
++ T TQC A+ L L + + N+ +N +K L G+ I +K L
Sbjct: 561 LQDTKTQCKLDALHALYNLSTY-SPNIPTLLSSNIIKSLQVLASTGNHLWI-----EKSL 614
Query: 685 ETLVTIIQSSHNEEEIASAMGILSKLPEV 713
L+ + S +EE+ + G++S L V
Sbjct: 615 AVLLNLASSREGKEEMITTQGMISTLATV 643
Score = 50 (22.7 bits), Expect = 5.8e-16, Sum P(4) = 5.8e-16
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 197 SALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA---DAASSPREKEM 246
S++ + + E+E+++ D +E D+IIALL++ D S E E+
Sbjct: 110 SSIGSQILDIVGELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEI 162
Score = 42 (19.8 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 241 PREKEMKYFSKRKSLGSQP-LEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEK 294
P ++ Y+ S P + + S +D+ V P+E SS ER EK
Sbjct: 354 PESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEK 408
Score = 41 (19.5 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 773 GVIPKLVQLLEYGTTLTKEHAATSL 797
G+I L +L+ G T+ +E A + L
Sbjct: 635 GMISTLATVLDTGDTVEQEQAVSCL 659
Score = 38 (18.4 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 771 EAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRK 815
+ GVIP LV + G+ ++ + L F + +P P ++
Sbjct: 675 QEGVIPSLVSISVNGSPRGRDKSQKLLMLF-REQRHRDQPSPNKE 718
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 180 (68.4 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 35/77 (45%), Positives = 46/77 (59%)
Query: 256 GSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSIL 315
G P+ P + CPI+ +M DPV +SGQT+ER IEKWFSDG+N CP T L L
Sbjct: 267 GQMPVPP-EELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISL 325
Query: 316 RPNKTLRQSIEEWKDRN 332
PN ++ I W ++N
Sbjct: 326 TPNNCVKGLIASWCEQN 342
Score = 109 (43.4 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 42/172 (24%), Positives = 75/172 (43%)
Query: 385 IVRSLGRRI---EERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDA 441
++R L + I E A AL L LS + + IG Q L+ + + Q DA
Sbjct: 513 VIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDA 572
Query: 442 QELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPES--VKMRMATTLAEMELTDHHKASL 499
L NLS N+ + +N K L L++ E+ ++ +A L + ++
Sbjct: 573 LHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAV 632
Query: 500 LEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI-KEGAVGPLV 550
++ L ++ GD ++ AV L L + ++ +QM+ +EG + LV
Sbjct: 633 SSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLV 684
Score = 80 (33.2 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 45/242 (18%), Positives = 100/242 (41%)
Query: 23 VEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREI 82
V + E + A+++ + + KEL+ L +++ + L G+ A+ L+ +
Sbjct: 3 VTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQ-ALCSLHIAL 61
Query: 83 KGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALG-ILPLASLDLSTDIIEEIE 141
+ AK + CS+ +K+YL + A++ + + + L + + + + I+E +
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVG 121
Query: 142 KVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
++ + + ++ G + N + + + A + I++ R AL
Sbjct: 122 ELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALA- 180
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIA-LLERADAASSPREKEMKYFSKRKSLGSQPL 260
E K I+ +R +D+ + + I+A LL S E+ + S GS P
Sbjct: 181 ERRALKKLIDRARAEEDKRK----ESIVAYLLHLMRKCSKLFRSEI--LDENDSPGSYPC 234
Query: 261 EP 262
P
Sbjct: 235 SP 236
Score = 51 (23.0 bits), Expect = 7.6e-14, Sum P(4) = 7.6e-14
Identities = 35/142 (24%), Positives = 61/142 (42%)
Query: 603 LINLTGPNVQQRI-LQTFNALCR-SPSAGNIKTTLTQCSAIPVLVQLCEHDNENV---RA 657
L+ L ++ + L +AL S + NI L+ + I L L EN+ ++
Sbjct: 556 LVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSS-NIIKSLQGLLASTGENLWIEKS 614
Query: 658 NAVKLFCCLVDDG-DEAIIREHVGQKCLETLVTIIQ--SSHNEEEIASAMGILSKLPEVP 714
AV L +G DEA+ Q + +L T++ + +E+ S + IL E
Sbjct: 615 LAVLLNLASSQEGKDEAVS----SQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRE-- 668
Query: 715 QFTQWLLDAGALPIVLNFLKNG 736
Q +L G +P +++ NG
Sbjct: 669 SCIQMVLQEGVIPSLVSISVNG 690
Score = 46 (21.3 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 857 EDPDHGACEASLDALVTLIEGERLQNGSKVLE 888
ED D E D L L E E L+ KV+E
Sbjct: 415 EDSDINVLERYQDLLAVLNEEEGLEKKCKVVE 446
Score = 45 (20.9 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 771 EAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKR 814
+ GVIP LV + GT +E + L F + +P R
Sbjct: 676 QEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNR 719
Score = 41 (19.5 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 773 GVIPKLVQLLEYGTTLTKEHAATSL 797
G+I L +L+ G T +E A + L
Sbjct: 636 GMISSLATVLDMGDTTEQEQAVSCL 660
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 265 (98.3 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 135/566 (23%), Positives = 246/566 (43%)
Query: 10 ASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSE 69
A T A L + V ++ ++A ++ + LA L + +L+ + D + +
Sbjct: 33 APTGLAGATLLRAVASLAASLVAGARPPSQRRNVDALARRLALLSAILESI-LLDTAAAG 91
Query: 70 GLNSAIEILNREIK----GAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGIL 125
+ A + RE+ A+ L + + + + L+ + +D E++ L +L
Sbjct: 92 AFSDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASFRDLDAELAVVLDVL 151
Query: 126 PLASLDLSTD---IIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANH- 181
P ASL LS D +++ + C + E++ +++ ++ + +H
Sbjct: 152 PAASLRLSHDATGLLDLLRAHC-RCRAPAQYHDPDEAALRERLMDALRQFDLGQP-PDHP 209
Query: 182 -LLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA----- 235
L SL+AD +GIST S + E D + +I + +++ + + ++ALL
Sbjct: 210 SLQSLLAD-MGISTAASC-RAEIDYLEEQILS---QEEDTDLPLVGSVLALLRYCLFAVF 264
Query: 236 DAASSPREKEMKYFSKRK---SLGS---QPLEPLQSFYCPITRDVMVDPVETSSGQTFER 289
D +++ ++ R+ S+G + F CPI+ D+M DPV S+GQT++R
Sbjct: 265 DPSNAKALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDR 324
Query: 290 SAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEV 349
+I +W +G++ CP + L L PN+ LR I +W + + P+
Sbjct: 325 PSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCG---VYGLQYDSPE----SN 377
Query: 350 EEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLEL--S 407
E + C+ C R AN A +VR L E K A + L
Sbjct: 378 EGMAECVAAS---CSSRAAME-----ANKATA-RILVRMLEDGSENVKAVAAKEIRLLAK 428
Query: 408 TCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ-MAKANYFKH 466
T R I D+ G I LL + S+D A +A L NLS + N + M + +
Sbjct: 429 TGKQNRAFIADL-GAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRL 487
Query: 467 LLQRLSAG-PESVKMRMATTLAEMELTDHHKASLL-EGNVLGPLLHLVSRGDIQMKKVAV 524
++ L G K A TL + + + K ++ E + L ++++G + KK AV
Sbjct: 488 IVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAV 547
Query: 525 KALRNLSSVPQNGLQMIKEGAVGPLV 550
AL NLS+ P++ +M++ AV L+
Sbjct: 548 MALFNLSTHPESSARMLESCAVVALI 573
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 235 (87.8 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 86/358 (24%), Positives = 164/358 (45%)
Query: 6 VVTSASTVPA-SEALSQIVEAILEVM--IAS---NNVLIKKESFKELAAYLERIVPVLKE 59
++T + P S +L+ +V+++L++ I S + K S KE +++ +V +E
Sbjct: 12 ILTFPAVNPCESISLTTLVDSLLQLAGEILSFKPKHFSTNKRSVKETLRHVQTLVIFFEE 71
Query: 60 LNKR----DLSHSEGLNSAIEILNREIKGAKELTTECSKRN-KVYLLMNCRAIVKRLKDT 114
L + + + ++ L+ + K L +C++ K+Y+LMN + +D
Sbjct: 72 LRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHFRDL 131
Query: 115 AREISQALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVE--SGIQER 172
R IS +L P+ S+DL ++ E I V + ++ V + E
Sbjct: 132 TRSISTSLDTFPVRSVDLPGEVNELIYLVMRQTRKSEARPDRDDKRAIDSVYWFFNLFEN 191
Query: 173 NVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQ--MDQII- 229
++ + ++ +L ++ D +G+ R +K E D + EI + + E + M I
Sbjct: 192 RINPN-SDEILRVL-DHIGVRKWRDCVK-EIDFLREEISVGKKSNIEIELLSNLMGFICY 248
Query: 230 ---ALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQT 286
+L D ++KE +SL L CPI+ ++M DPV SG T
Sbjct: 249 CRCVILRGIDVDDEEKDKEEDDLMMVRSLNVDDLR------CPISLEIMSDPVVLESGHT 302
Query: 287 FERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKL 344
++RS+I KWF+ GN CP T L +++L N +++Q I+ + +N ++ K K+
Sbjct: 303 YDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKKKV 360
Score = 78 (32.5 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 41/178 (23%), Positives = 78/178 (43%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDD--GDEAIIREHVGQKCLETLVT 689
++ L + + L+++ D+ ++ NA+ L D G I+ E G L +V
Sbjct: 409 RSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGG--LRLIVE 466
Query: 690 IIQSSHNEEE---IASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQV 746
++ E A+A+ LS L + + + DA +P ++ +K+ D +
Sbjct: 467 VLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDA--IPGLVRIVKSCDYGDSAK--- 521
Query: 747 VENAVGALRRF--TAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSK 802
NA+ A+R P N W R AG++P L+ L++ ++ A S+A +K
Sbjct: 522 -RNALIAIRSLLMNQPDN-HW--RILAAGIVPVLLDLVK-SEEISDGVTADSMAILAK 574
Score = 73 (30.8 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 45/190 (23%), Positives = 83/190 (43%)
Query: 620 NALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHV 679
N C + T L ++ ++Q N V K VD E++ E
Sbjct: 316 NITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKK---KVDVA-ESLAAEEA 371
Query: 680 GQKCLETLV-TIIQSSHNEEEIASAMGILSKLPEVPQFTQ-WLLDAGALPIVLNFLKNGR 737
G+ E L +I+ +EEE+ A+ + L + F + L++AG + ++ L R
Sbjct: 372 GKLTAEFLAGELIKG--DEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKIL---R 426
Query: 738 QNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTL-TKEHAATS 796
+DP R Q ENA+ + + + + + G + +V++L G ++++AA +
Sbjct: 427 SDDP-RIQ--ENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAA 483
Query: 797 LARFSKNSLG 806
L F +SLG
Sbjct: 484 L--FYLSSLG 491
Score = 65 (27.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 35/123 (28%), Positives = 54/123 (43%)
Query: 378 GDDA--VESIVRSL--GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSD 433
G+D + IV L G R E R+ A A L LS+ IG++ I LV + S
Sbjct: 455 GEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSC 514
Query: 434 D--NQASRDAQELLENLSFSD-DNVVQMAKANYFKHLL-----QRLSAGPESVKMRMATT 485
D + A R+A + +L + DN ++ A LL + +S G + M +
Sbjct: 515 DYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAK 574
Query: 486 LAE 488
+AE
Sbjct: 575 MAE 577
Score = 59 (25.8 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 28/118 (23%), Positives = 53/118 (44%)
Query: 621 ALCRSPSAGNIKTTLTQCS-AIPVLVQL---CEHDNENVRANAVKLFCCLVDDGDEAIIR 676
AL S G+ + + S AIP LV++ C++ + R + + L++ D
Sbjct: 483 ALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRI 542
Query: 677 EHVGQKCLETLVTIIQSSHNEEEI-ASAMGILSKLPEVPQFTQWLLDAGALPIVLNFL 733
G + L+ +++S + + A +M IL+K+ E P +L G L + + L
Sbjct: 543 LAAG--IVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAVKIL 598
Score = 59 (25.8 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 38/181 (20%), Positives = 79/181 (43%)
Query: 565 EETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCR 624
EE A++ + + T + S+ L+E+ + L ++ P +Q+ + L +
Sbjct: 389 EEMVKALVEIRILT--KTSTFYRSCLVEAGV-VESLMKILRSDDPRIQENAMAGIMNLSK 445
Query: 625 SPSAGNIKTTLTQCSAIPVLVQLCEHD--NENVRANAVKLFCCLVDDGDEAIIREHVGQK 682
AG + + ++V++ E+ + A LF L GD + + +
Sbjct: 446 D-IAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFY-LSSLGDYSRLIGEISD- 502
Query: 683 CLETLVTIIQS-SHNEEEIASAM-GILSKLPEVPQFTQW-LLDAGALPIVLNFLKNGRQN 739
+ LV I++S + + +A+ I S L P W +L AG +P++L+ +K+ +
Sbjct: 503 AIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPD-NHWRILAAGIVPVLLDLVKSEEIS 561
Query: 740 D 740
D
Sbjct: 562 D 562
Score = 58 (25.5 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 756 RFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRK 815
R T+ ++ EAGV+ L+++L +E+A + SK+ G +R + +
Sbjct: 399 RILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDG 458
Query: 816 G 816
G
Sbjct: 459 G 459
Score = 52 (23.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 17/83 (20%), Positives = 37/83 (44%)
Query: 887 LEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKY----GKSAQMPLVDLTQR 942
L +A ++ +++ L S P++QE A+ + + + K + G ++ + L
Sbjct: 412 LVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDG 471
Query: 943 GNSSMKSLSARVLAHLNVLQDQS 965
+ +A L +L+ L D S
Sbjct: 472 ARRESRQYAAAALFYLSSLGDYS 494
Score = 51 (23.0 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 842 CLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVL-EDANAIDRMVRFL 900
CL+EA V L+++L D E ++ ++ L + + ++++ ED + +V L
Sbjct: 411 CLVEAGVVESLMKILRSDDPRIQENAMAGIMNL--SKDIAGKTRIVGEDGGGLRLIVEVL 468
Query: 901 S 901
+
Sbjct: 469 N 469
Score = 50 (22.7 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 20/110 (18%), Positives = 46/110 (41%)
Query: 467 LLQRLSAGPESVKMRMATTLAEMELTD-HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVK 525
L L G E ++ + + T +++ L+E V+ L+ ++ D ++++ A+
Sbjct: 379 LAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMA 438
Query: 526 ALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLA 575
+ NLS +++ E G + R+ A A+ +L+
Sbjct: 439 GIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLS 488
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 201 (75.8 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 99/445 (22%), Positives = 190/445 (42%)
Query: 17 EALSQIVEAILEVM-IASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAI 75
E +S++V+++ E+ +S+ I K +L + + P +EL ++ + +
Sbjct: 11 ELMSRLVDSVKEISGFSSSRGFIGKIQ-GDLVRRITLLSPFFEELIDVNVELKKDQITGF 69
Query: 76 EILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTD 135
E + + + EL + +K++ L + ++V++ +D EI AL +P +++S +
Sbjct: 70 EAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEE 129
Query: 136 IIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANHLLSLIADAVGISTE 195
+ E+++ + + Q + + E +D +L ++ + ++T
Sbjct: 130 VREQVQLL--HFQFKRAKERWEESDLQLSHDLAMAENVMDPDPI--ILKRLSQELQLTTI 185
Query: 196 RSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSL 255
LKKE + D + L++ SS + + S+ S
Sbjct: 186 -DELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESS--DPDPSTGSRIVSR 242
Query: 256 GSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSIL 315
P+ P + F CPI+ ++M DPV S+GQT+ERS+I+KW G+ CP + L + L
Sbjct: 243 HRSPVIP-EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGL 301
Query: 316 RPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERL 375
PN L+ I W + N I + + +T++ D C + E+L
Sbjct: 302 TPNYVLKSLIALWCESNG-IELPQNQGSCRTTKIGG-----SSSSD-CDRTFVLSLLEKL 354
Query: 376 ANGDD----AVESIVRSLGRRIEERKLAVA------LLLELSTCNTLRDQIGDVQGCILL 425
ANG A +R L +R + ++ +A LL+EL + R Q V + L
Sbjct: 355 ANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNL 414
Query: 426 LVTMASSD---DNQASRDAQELLEN 447
+ + D A D E+L+N
Sbjct: 415 SINEGNKGAIVDAGAITDIVEVLKN 439
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 90/379 (23%), Positives = 155/379 (40%)
Query: 303 CPLTMTVL-DTSILRPNKTL-RQSIEEW---------KDRNTMITIASMKPKLVSTEVEE 351
CP+++ ++ D I+ +T R SI++W K + T++ A + P V +
Sbjct: 254 CPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH-AGLTPNYVLKSLI- 311
Query: 352 VLHCLEQLQDLCQQRDQHREWE--RLANGD-DA--VESIVRSLGRRIEERKLAVALLLEL 406
L C +L Q + R + ++ D D V S++ L E++ A A L L
Sbjct: 312 ALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRL 371
Query: 407 STCNTLRDQIGDVQ-GCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFK 465
+ +++ + G I LLV + SS D + + L NLS ++ N + A
Sbjct: 372 LAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAIT 431
Query: 466 HLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVK 525
+++ L G + A TL + + D +K ++ + L+ L+ G + KK A
Sbjct: 432 DIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAAT 491
Query: 526 ALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQ 585
A+ NL N + +K G V PL + A AI LA+ + QE +
Sbjct: 492 AIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMV----DEALAI--LAILSTNQEG-K 544
Query: 586 TPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIK--TTLTQCSAIPV 643
T + ES I +L +I P ++ LC GNI+ + A
Sbjct: 545 TAIAEAES---IPVLVEIIRTGSPRNRENAAAILWYLC----IGNIERLNVAREVGADVA 597
Query: 644 LVQLCEHDNENVRANAVKL 662
L +L E+ + + A L
Sbjct: 598 LKELTENGTDRAKRKAASL 616
Score = 111 (44.1 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 67/253 (26%), Positives = 119/253 (47%)
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRA-AEAGVIPKL 778
+ +AGA+P+++ L + DP R Q E++V AL + N E K A +AG I +
Sbjct: 383 IAEAGAIPLLVELLSSP---DP-RTQ--EHSVTALLNLSI--N-EGNKGAIVDAGAITDI 433
Query: 779 VQLLEYGTTLTKEHAATSLARFSKNSLGLSR-PIPKRKGFWCFSPPPEIGCQVHGGLCGI 837
V++L+ G+ +E+AA +L FS + + ++ I E G + G
Sbjct: 434 VEVLKNGSMEARENAAATL--FSLSVIDENKVAIGAAGAIQALISLLEEGTR-RGKKDAA 490
Query: 838 ESSF--CLLEAN---AVR-----PLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVL 887
+ F C+ + N AV+ PL R+L+D G + +L A++ ++ Q G +
Sbjct: 491 TAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEAL-AILAILSTN--QEGKTAI 547
Query: 888 EDANAIDRMVRFLSSPSPKLQEKALD-----SVERIFRLPEFKQKYGKSAQMPLVDLTQR 942
+A +I +V + + SP+ +E A + I RL ++ G A + L +LT+
Sbjct: 548 AEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERL-NVAREVG--ADVALKELTEN 604
Query: 943 GNSSMKSLSARVL 955
G K +A +L
Sbjct: 605 GTDRAKRKAASLL 617
Score = 76 (31.8 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVK-LFCCLVDDGDEAIIREHVGQKCLETLVTI 690
K + AI L+ L E + +A +F + G+++ V ++ L +
Sbjct: 462 KVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKS---RAVKGGIVDPLTRL 518
Query: 691 IQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENA 750
++ + + A+ IL+ L + + +A ++P+++ ++ G NR ENA
Sbjct: 519 LKDAGGGM-VDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPR--NR----ENA 571
Query: 751 VGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSL 797
A+ + N+E A E G L +L E GT K AA+ L
Sbjct: 572 A-AILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLL 617
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 158 (60.7 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 29/65 (44%), Positives = 39/65 (60%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQ 323
+ F CPI+ ++M DP S+GQT+ERS I++W GN CP T L+ L PN LR
Sbjct: 245 EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRS 304
Query: 324 SIEEW 328
I +W
Sbjct: 305 LISQW 309
Score = 158 (60.7 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 77/314 (24%), Positives = 130/314 (41%)
Query: 354 HCLEQLQDLCQQRDQHREWE-RLANGD-DAVESIVRSLGRR-IEERKLAVALLLELSTCN 410
H +EQ R ++ + R +GD A+ ++V L + IE+R+ AV+ + LS +
Sbjct: 313 HNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRS 372
Query: 411 T-LRDQIGDVQGCILLLVTMASSD-DNQASRDAQELLENLSFSDDNVVQMAKANYFKHLL 468
T R I + G I +LV + +SD D + +A + NLS + N + A ++
Sbjct: 373 TDNRILIAEA-GAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIV 431
Query: 469 QRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALR 528
L AG + A TL + L D +K + + L+ L+ G ++ KK A AL
Sbjct: 432 LVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALF 491
Query: 529 NLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPV 588
NL N + ++ G V PLV +E T + LA S+Q
Sbjct: 492 NLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMA--DEALTILSVLA-------SNQVAK 542
Query: 589 TLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLC 648
T + I L + P ++ LC+ + I ++ + A+ L++L
Sbjct: 543 TAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLI--SIGRLGAVVPLMELS 600
Query: 649 EHDNENVRANAVKL 662
E + A L
Sbjct: 601 RDGTERAKRKANSL 614
Score = 152 (58.6 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 67/293 (22%), Positives = 129/293 (44%)
Query: 411 TLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSF-SDDNVVQMAKANYFKHLLQ 469
+ RD GD+ I LV SS + R A + +LS S DN + +A+A L++
Sbjct: 332 SFRDLSGDMSA-IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVK 390
Query: 470 RLSA-GPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALR 528
L++ G + T + + + +H+K ++ + ++ ++ G ++ ++ A L
Sbjct: 391 LLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLF 450
Query: 529 NLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPV 588
+LS +N + + GA+ LVD +++ ATA+ +L + YQ + V
Sbjct: 451 SLSLADENKIIIGASGAIMALVDLLQYGSVRG---KKDAATALFNLCI---YQGNKGRAV 504
Query: 589 TLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLC 648
K + + L + + + L + L + A KT + + +AIP L+
Sbjct: 505 RA-GIVKPLVKM--LTDSSSERMADEALTILSVLASNQVA---KTAILRANAIPPLIDCL 558
Query: 649 EHDNENVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIA 701
+ D R NA + CL E +I +G+ L +V +++ S + E A
Sbjct: 559 QKDQPRNRENAAAILLCLCKRDTEKLIS--IGR--LGAVVPLMELSRDGTERA 607
Score = 88 (36.0 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 65/296 (21%), Positives = 120/296 (40%)
Query: 512 VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKE-GAVGPLVDXXXXXXXXXXXXREETATA 570
+S I+ ++ AV +R+LS + +I E GA+ LV +E T
Sbjct: 350 LSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTET--QENAVTC 407
Query: 571 IMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGN 630
I++L++ Y+ + + + L + I ++ ++ ++ T +L A
Sbjct: 408 ILNLSI---YEHNKEL-IMLAGAVTSIVLVLRAGSM---EARENAAATLFSLSL---ADE 457
Query: 631 IKTTLTQCSAIPVLVQLCEHDNENVRANAVK-LF-CCLVDDGDEAIIREHVGQKCLETLV 688
K + AI LV L ++ + + +A LF C+ +R + ++ LV
Sbjct: 458 NKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGI----VKPLV 513
Query: 689 TIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVE 748
++ S +E A+ ILS L +L A A+P +++ L+ + NR E
Sbjct: 514 KMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPR--NR----E 567
Query: 749 NAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNS 804
NA A+ + E G + L++L GT K A + L K+S
Sbjct: 568 NAA-AILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSS 622
Score = 84 (34.6 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 64/272 (23%), Positives = 116/272 (42%)
Query: 693 SSHNEEEIASAMGILSKLPEVPQFTQWLL-DAGALPIVLNFLKNGRQNDPNRFQVVENAV 751
SS + E+ +A+ + L + + L+ +AGA+P+++ L + + ENAV
Sbjct: 351 SSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQ-----ENAV 405
Query: 752 GALRRFTAPTNLEWQKRAAE-AGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRP 810
+ + E K AG + +V +L G+ +E+AA +L FS + ++
Sbjct: 406 TCILNLSI---YEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATL--FSLSLADENKI 460
Query: 811 IPKRKG-FWCFSPPPEIGCQVHGGLCGIESSF--CLLEAN---AVR-----PLVRVLEDP 859
I G + G V G + F C+ + N AVR PLV++L D
Sbjct: 461 IIGASGAIMALVDLLQYG-SVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTD- 518
Query: 860 DHGACEASLDALVTLIEGERLQNGSKV-LEDANAIDRMVRFLSSPSPKLQEKALDSVERI 918
+ E D +T++ +K + ANAI ++ L P+ +E A + +
Sbjct: 519 --SSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCL 576
Query: 919 FRLPEFKQ-KYGK-SAQMPLVDLTQRGNSSMK 948
+ K G+ A +PL++L++ G K
Sbjct: 577 CKRDTEKLISIGRLGAVVPLMELSRDGTERAK 608
Score = 82 (33.9 bits), Expect = 9.3e-11, Sum P(3) = 9.3e-11
Identities = 53/205 (25%), Positives = 90/205 (43%)
Query: 598 FMLFSLIN--LTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENV 655
++L SLI+ T N++Q N ++ S G+ + SAI LV C+ ++++
Sbjct: 300 YVLRSLISQWCTKHNIEQPG-GYMNGRTKN-SDGSFRDLSGDMSAIRALV--CKLSSQSI 355
Query: 656 --RANAVKLFCCLVDDG-DEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPE 712
R AV L D I+ G + LV ++ S + E +A+ + L
Sbjct: 356 EDRRTAVSEIRSLSKRSTDNRILIAEAG--AIPVLVKLLTSDGDTETQENAVTCILNLSI 413
Query: 713 VPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEA 772
+ ++ AGA+ ++ L+ G + ENA L F+ E + +
Sbjct: 414 YEHNKELIMLAGAVTSIVLVLRAGSM------EARENAAATL--FSLSLADENKIIIGAS 465
Query: 773 GVIPKLVQLLEYGTTLTKEHAATSL 797
G I LV LL+YG+ K+ AAT+L
Sbjct: 466 GAIMALVDLLQYGSVRGKKDAATAL 490
Score = 81 (33.6 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 838 ESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMV 897
++ + EA A+ LV++L G E +A+ ++ ++ +++ A A+ +V
Sbjct: 374 DNRILIAEAGAIPVLVKLLTSD--GDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIV 431
Query: 898 RFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKS-AQMPLVDLTQRGNSSMKSLSARVLA 956
L + S + +E A ++ + E K G S A M LVDL Q G+ K +A L
Sbjct: 432 LVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALF 491
Query: 957 HLNVLQ 962
+L + Q
Sbjct: 492 NLCIYQ 497
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 380 DAVESIVRSLGR-RIEERKLAVALLLELSTCNTLR-DQIGDVQGCILLLVTMASSDDNQA 437
+A+ ++ L + + R+ A A+LL L +T + IG + G ++ L+ ++ +A
Sbjct: 549 NAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRL-GAVVPLMELSRDGTERA 607
Query: 438 SRDAQELLENL 448
R A LLE L
Sbjct: 608 KRKANSLLELL 618
Score = 41 (19.5 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 117 EISQALGILPLASLDLSTDIIEEIE 141
++ +ALG L D+S ++ E++E
Sbjct: 115 KLEKALGDLTYDRYDISDEVREQVE 139
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 254 (94.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 88/317 (27%), Positives = 149/317 (47%)
Query: 236 DAASSPREKEMKYFSKRKSLGSQPLEPL---QSFYCPITRDVMVDPVETSSGQTFERSAI 292
DA S+ RE M+ +K SL + LE + + F CP++ ++M DPV +SGQT+++ I
Sbjct: 47 DALSALREATMRKMAKSSSL--EMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFI 104
Query: 293 EKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEV 352
+KW S GN CP T VL + L PN +R+ I +W +N + T + P LV+ E E V
Sbjct: 105 QKWLSSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVN-EDETV 163
Query: 353 LHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTL 412
++ + + L + A + + R L R+ E + AL E
Sbjct: 164 TRSDREIFNSLLCKVSS---SNLQDQKSAAKEL-RLLTRKGTEFR---ALFGESP----- 211
Query: 413 RDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMA--KANYFKHLLQR 470
D+I + +L S+ D + D L N+S DD+ ++ N L+
Sbjct: 212 -DEITRLVNPLL----HGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDA 266
Query: 471 LSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGD-IQMKKVAVKALRN 529
L G + + A + + D +K + + +L PL+ L+ G+ + +K VA A+
Sbjct: 267 LRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAA-AIFT 325
Query: 530 LSSVPQNGLQMIKEGAV 546
L +N + +++GAV
Sbjct: 326 LCIAHENRSRAVRDGAV 342
Score = 214 (80.4 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 53/158 (33%), Positives = 89/158 (56%)
Query: 194 TERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRK 253
++ +A+ K E K E++ ++ D + + + Q I L+ DA S+ RE M+ +K
Sbjct: 9 SDPTAIAKA-KELKREMKKLLIKIDDEDDLGV-QTIDQLQ--DALSALREATMRKMAKSS 64
Query: 254 SLGSQPLEPL---QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVL 310
SL + LE + + F CP++ ++M DPV +SGQT+++ I+KW S GN CP T VL
Sbjct: 65 SL--EMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVL 122
Query: 311 DTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTE 348
+ L PN +R+ I +W +N + T + P LV+ +
Sbjct: 123 PHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVNED 160
Score = 79 (32.9 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 476 ESVKMRMATTLAEMEL-TDHHKASLLEG-NVLGPLLHLVSRGDIQMKKVAVKALRNLSSV 533
E ++ + TTL + + D +K + E NV+ L+ + RG + + A A+ LS++
Sbjct: 229 EKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSAL 288
Query: 534 PQNGLQMIKEGAVGPLVD 551
N + + K G + PL+D
Sbjct: 289 DSNKVLIGKSGILKPLID 306
Score = 71 (30.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 849 VRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSK--VLEDANAIDRMVRFLSSPSPK 906
V PL+ +PD E D + TL+ + +K V E+ N I ++ L +
Sbjct: 218 VNPLLHG-SNPDEKLQE---DVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVA 273
Query: 907 LQEKALDSVERIFRLPEFKQKYGKSAQM-PLVDLTQRGNS-SMKSLSARV----LAHLN 959
+ A ++ + L K GKS + PL+DL + GN ++K ++A + +AH N
Sbjct: 274 TRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHEN 332
Score = 60 (26.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 31/152 (20%), Positives = 71/152 (46%)
Query: 666 LVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDA-G 724
LV++ DE + R ++ +L+ + SS+ +++ ++A + + +F ++
Sbjct: 156 LVNE-DETVTRSD--REIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPD 212
Query: 725 ALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEY 784
+ ++N L +G N + Q E+ V L + + + VIP L+ L
Sbjct: 213 EITRLVNPLLHG-SNPDEKLQ--EDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRR 269
Query: 785 GTTLTKEHAATSLARFSKNSLGLSRPIPKRKG 816
GT T+ +AA ++ F+ ++L ++ + + G
Sbjct: 270 GTVATRSNAAAAI--FTLSALDSNKVLIGKSG 299
Score = 55 (24.4 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 29/117 (24%), Positives = 49/117 (41%)
Query: 377 NGDDAV-ESIVRSLGRRIEERKLA---VALLLELSTCNTLRDQIGDVQGCILLLVTMASS 432
N AV + VR LG++I +A+L L T +++G++ G LL S
Sbjct: 332 NRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRES 391
Query: 433 DDNQASRDAQELLENLSFSDDNVVQMAKANYFKH-LLQRLSAGPESVKMRMATTLAE 488
+ + +A +L + FSD + K H + +LS S R A + +
Sbjct: 392 ECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGTSRAQRKANGILD 448
Score = 49 (22.3 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 38/175 (21%), Positives = 69/175 (39%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNE-NVRANAVKLFC-CLVDDGDEAIIREHVGQKCLETLVT 689
K + + + L+ L E N ++ A +F C+ + +R+ G + L
Sbjct: 292 KVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRD--G--AVRVLGK 347
Query: 690 IIQSSHNEEEIASAMGILSKLPEVPQFTQW--LLDAGALPIVLNFLKNGRQNDPNRFQVV 747
I + +E+ + IL+ L T W + + G L V LK R+++ R +
Sbjct: 348 KISNGLYVDEL---LAILAML-----VTHWKAVEELGELGGVSWLLKITRESECKRNK-- 397
Query: 748 ENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSK 802
ENA+ L +W++ E + +L GT+ + A L R K
Sbjct: 398 ENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREGTSRAQRKANGILDRLRK 452
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 888 EDANAIDRMVRFL---SSPSPKLQEKALDSVERIFRLPEFKQKY--GKSAQMPL-VDLTQ 941
E + I R+V L S+P KLQE + ++ I + +K +PL +D +
Sbjct: 209 ESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALR 268
Query: 942 RGNSSMKSLSARVLAHLNVL 961
RG + +S +A + L+ L
Sbjct: 269 RGTVATRSNAAAAIFTLSAL 288
Score = 43 (20.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 749 NAVGALRRFTAPTNLEWQK-RAAEAGVIPKLVQLLEYGTTLTKEHAATSL 797
NA A+ FT L+ K ++G++ L+ LLE G L + A ++
Sbjct: 277 NAAAAI--FTLSA-LDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAI 323
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 152 (58.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 426 LVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP-ESVKMRMAT 484
LV++ S D + DA L NLS +D+N +A++ L+ L G E K A
Sbjct: 468 LVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAA 527
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
TL + + + +K + E + PL+ L+ G + KK A AL NLS +N ++I+ G
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAG 587
Query: 545 AVGPLVD 551
AV LV+
Sbjct: 588 AVRYLVE 594
Score = 152 (58.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 165 VESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQ 224
++ ++++ + +L IA++ G+ + + L E + E++ + + EA
Sbjct: 153 IDQALKDQKKGVGPTSEVLVKIAESTGLRSNQEILV-EGVVLTNMKEDAELTDNDTEAEY 211
Query: 225 MDQIIALLERADAASSPREKEMKYFSKRKSLGSQ-PLEPLQSFYCPITRDVMVDPVETSS 283
+D +I+L + +Y S K + P+ F C ++ ++M DPV +S
Sbjct: 212 LDGLISLTTQMH----------EYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVAS 261
Query: 284 GQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTM 334
GQTFER I+KW G +CP T L + L PN +R + W + N +
Sbjct: 262 GQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNV 312
Score = 131 (51.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 56/233 (24%), Positives = 111/233 (47%)
Query: 430 ASSDDNQASRDAQELLENLSF-SDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAE 488
+SS D Q R+A + L+ S DN + +A+ L+ L + E ++ T L
Sbjct: 432 SSSLDTQ--REATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLN 489
Query: 489 MELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKV-AVKALRNLSSVPQNGLQMIKEGAVG 547
+ + D++K+ + E + PL+H++ G ++ K + L +LS + + ++ + GA+
Sbjct: 490 LSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIE 549
Query: 548 PLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLT 607
PLVD +++ ATA+ +L++ ++T V +E+ + L L++
Sbjct: 550 PLVDLLGSGSLSG---KKDAATALFNLSI----HHENKTKV--IEAGA-VRYLVELMDPA 599
Query: 608 GPNVQQRILQTFN-ALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANA 659
V++ ++ N A R G I + + IPVLV++ E + + NA
Sbjct: 600 FGMVEKAVVVLANLATVRE---GKI--AIGEEGGIPVLVEVVELGSARGKENA 647
Score = 122 (48.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 393 IEERKL-AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS 451
+EE K + A L LS + +IG+ G I LV + S +DA L NLS
Sbjct: 518 LEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNLSIH 576
Query: 452 DDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHL 511
+N ++ +A ++L++ + V+ + LA + K ++ E + L+ +
Sbjct: 577 HENKTKVIEAGAVRYLVELMDPAFGMVE-KAVVVLANLATVREGKIAIGEEGGIPVLVEV 635
Query: 512 VSRGDIQMKKVAVKALRNLSS-VPQNGLQMIKEGAVGPLV 550
V G + K+ A AL L + P+ +I+EG + PLV
Sbjct: 636 VELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLV 675
Score = 122 (48.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 49/209 (23%), Positives = 100/209 (47%)
Query: 594 DKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNE 653
+ E+ L + + + Q+ L R+ S N + + +C AIP LV L +E
Sbjct: 420 ETEVKKLIDDLKSSSLDTQREATARIRILARN-STDN-RIVIARCEAIPSLVSLLYSTDE 477
Query: 654 NVRANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPE 712
++A+AV L ++D ++++I E G + L+ ++++ + EE A++ L L
Sbjct: 478 RIQADAVTCLLNLSINDNNKSLIAES-G--AIVPLIHVLKTGYLEEAKANSAATLFSLSV 534
Query: 713 VPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEA 772
+ ++ + +AGA+ +++ L +G + ++A AL F + E + + EA
Sbjct: 535 IEEYKTEIGEAGAIEPLVDLLGSGSLSGK------KDAATAL--FNLSIHHENKTKVIEA 586
Query: 773 GVIPKLVQLLEYGTTLTKEHAATSLARFS 801
G + LV+L++ + E A LA +
Sbjct: 587 GAVRYLVELMDPAFGMV-EKAVVVLANLA 614
Score = 91 (37.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 51/179 (28%), Positives = 86/179 (48%)
Query: 630 NIKTTLTQCSAIPVLVQLCEHDN-ENVRAN-AVKLFCCLVDDGDEAIIREHVGQKCLETL 687
N K+ + + AI L+ + + E +AN A LF V + + I E G +E L
Sbjct: 495 NNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGE-AG--AIEPL 551
Query: 688 VTIIQSSH--NEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQ 745
V ++ S +++ A+A+ LS E T+ +++AGA+ ++ + DP F
Sbjct: 552 VDLLGSGSLSGKKDAATALFNLSIHHE--NKTK-VIEAGAVRYLVELM------DP-AFG 601
Query: 746 VVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNS 804
+VE AV L T E + E G IP LV+++E G+ KE+A +L + +S
Sbjct: 602 MVEKAVVVLANLA--TVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHS 658
Score = 82 (33.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 845 EANAVRPLVRVLEDPDHGACEASLDALVTLIE-GERLQNGSKVLEDANAIDRMVRFLSSP 903
EA A+ PLV +L G+ DA L +N +KV+E A A+ +V L P
Sbjct: 544 EAGAIEPLVDLLGS---GSLSGKKDAATALFNLSIHHENKTKVIE-AGAVRYLVE-LMDP 598
Query: 904 SPKLQEKALDSVERIFRLPEFKQKYGKSAQMP-LVDLTQRGNSSMKSLSARVLAHL 958
+ + EKA+ + + + E K G+ +P LV++ + G++ K + L L
Sbjct: 599 AFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQL 654
Score = 82 (33.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 838 ESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMV 897
++ + A+ LV +L D DA+ L+ N ++ ++ AI ++
Sbjct: 454 DNRIVIARCEAIPSLVSLLYSTDE---RIQADAVTCLLNLSINDNNKSLIAESGAIVPLI 510
Query: 898 RFLSSPSPKLQEKALDSVERIFRLP---EFKQKYGKSAQM-PLVDLTQRGNSSMKSLSAR 953
L + L+E +S +F L E+K + G++ + PLVDL G+ S K +A
Sbjct: 511 HVLKTGY--LEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAAT 568
Query: 954 VLAHLNV 960
L +L++
Sbjct: 569 ALFNLSI 575
Score = 80 (33.2 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 47/199 (23%), Positives = 85/199 (42%)
Query: 770 AEAGVIPKLVQLLEYG-TTLTKEHAATSLARFS-----KNSLGLS---RPIPKRKGFWCF 820
AE+G I L+ +L+ G K ++A +L S K +G + P+ G
Sbjct: 501 AESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSL 560
Query: 821 SPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERL 880
S + + E+ ++EA AVR LV ++ DP G E A+V L +
Sbjct: 561 SGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEK---AVVVLANLATV 616
Query: 881 QNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIF-RLPEFKQKYGKSAQMP-LVD 938
+ G + + I +V + S + +E A ++ ++ P+F + +P LV
Sbjct: 617 REGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVA 676
Query: 939 LTQRGNSSMKSLSARVLAH 957
LT+ G + K + +L +
Sbjct: 677 LTKSGTARGKEKAQNLLKY 695
Score = 75 (31.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 33/180 (18%), Positives = 78/180 (43%)
Query: 53 IVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRN-KVYLLMNCRAIVKRL 111
I PVL+ L D + SE LN+ E L + + +E + +++ ++ ++ +L
Sbjct: 48 IKPVLENLIDSDAAPSELLNNGFEELAQYVDELREQFQSWQPLSTRIFYVLRIESLASKL 107
Query: 112 KDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQE 171
++++ E+ Q +L L D+I + C + ++ +++
Sbjct: 108 RESSLEVFQ---LLKHCEQHLPADLISPSFEECIELVKLVARDEISYT-----IDQALKD 159
Query: 172 RNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIAL 231
+ + +L IA++ G+ + + L E + E++ + + EA +D +I+L
Sbjct: 160 QKKGVGPTSEVLVKIAESTGLRSNQEILV-EGVVLTNMKEDAELTDNDTEAEYLDGLISL 218
Score = 71 (30.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 41/170 (24%), Positives = 72/170 (42%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVK-LFCCLVDDGDEAIIREHVGQKCLETLVTI 690
KT + + AI LV L + + + +A LF + ++ + E G + LV +
Sbjct: 539 KTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIE-AG--AVRYLVEL 595
Query: 691 IQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENA 750
+ + E A+ +L+ L V + + + G +P+++ ++ G ENA
Sbjct: 596 MDPAFGMVE--KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGK------ENA 647
Query: 751 VGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARF 800
AL + + ++ GVIP LV L + GT KE A L F
Sbjct: 648 TAALLQLCTHSP-KFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYF 696
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 248 (92.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 123/509 (24%), Positives = 220/509 (43%)
Query: 61 NKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQ 120
+K +S S L ++ L + +K L C++ +K++LL+ +I D +EIS
Sbjct: 94 SKSSVSESTAL-LCLKELYLLLYRSKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEIST 152
Query: 121 ALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVES---GIQERNVDRS 177
L +LP+ L LS DI E+IE + + E S G + + S
Sbjct: 153 LLDVLPVNDLGLSDDIREQIELLQRQSRKARLYIDKNDESLRESFYSFLDGFENGKIPSS 212
Query: 178 YANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADA 237
L + +GI +S + E + + +I N + +V ++ +A+
Sbjct: 213 V--DLRMFFVEKLGIRDSKSC-RSEIEFLEEQIVNHDGDLEPTGSV-INGFVAITRYCRF 268
Query: 238 ASSPREKE-MKYFSK------RKSLGSQPLEPL-----QSFYCPITRDVMVDPVETSSGQ 285
E++ M+++ + RK +Q + + F CPI+ D+M DPV S+GQ
Sbjct: 269 LLFGFEEDGMEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQ 328
Query: 286 TFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLV 345
T++R++I +W +G+ CP T +L S + PN+ L+ I +W + + S + +
Sbjct: 329 TYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGI----SYESEFT 384
Query: 346 STEVEEVLHCLEQLQDL-CQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLL 404
+ E L + + + LA+G A +++ R I R LA
Sbjct: 385 DSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVA---AREI--RLLA----- 434
Query: 405 ELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ-MAKANY 463
T R I + G I L + +S++ A ++ + NLS + N + M + +
Sbjct: 435 --KTGKENRAYIAEA-GAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDC 491
Query: 464 FKHLLQRLSAG-PESVKMRMATTLAEMELTDHHKASL-LEGNVLGPLLHLVSRGDIQMKK 521
+ ++ L +G + A TL + +K + + + L L+ G + KK
Sbjct: 492 LESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKK 551
Query: 522 VAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
AV AL NLS+ P N +MI+ G V LV
Sbjct: 552 DAVTALYNLSTHPDNCSRMIEGGGVSSLV 580
Score = 49 (22.3 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 748 ENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLAR 799
ENAV AL ++ A I L+Q L + T A SLAR
Sbjct: 632 ENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLAR 683
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 231 (86.4 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 86/348 (24%), Positives = 158/348 (45%)
Query: 9 SASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKEL-----NKR 63
S S V ++L Q+ IL S + K+SF+E ++ ++ V +E+ N R
Sbjct: 23 SISIVTLLDSLIQLAGDILT--FKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSR 80
Query: 64 DLSHSEGLNSAIEILNREIKGAKELTTECSKRN-KVYLLMNCRAIVKRLKDTAREISQAL 122
H S+++ ++ + K L +C++ ++ ++MN + L+ R IS +L
Sbjct: 81 RYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSL 140
Query: 123 GILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYAN-H 181
P+AS+DL+T++ E I+ V + + + I V+R +
Sbjct: 141 SAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINR-ILALFVNRVVPDPD 199
Query: 182 LLSLIADAVGISTERSALKK-EF--DEFKSEIENSRMRK--DQAEAVQMDQ--------- 227
++ I D VGI +K+ F +E +E + + +K DQ E +
Sbjct: 200 EINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRCI 259
Query: 228 IIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTF 287
I+ +ER D + + K + L ++ CPI+ ++M DPV +G T+
Sbjct: 260 ILGRIERDDHHNHHEDGIKKDHDLIRGL------KVEDLLCPISLEIMTDPVVIETGHTY 313
Query: 288 ERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMI 335
+RS+I KWF GN CP+T +L ++ L N ++RQ I + N ++
Sbjct: 314 DRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIV 361
Score = 65 (27.9 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 465 KHLLQRLSAGPESVKMRMATTL-AEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVA 523
K L L G E + R + + + + +++ L++ + PLL L+S DI++++ A
Sbjct: 391 KFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENA 450
Query: 524 VKALRNLS 531
+ + NLS
Sbjct: 451 MAGILNLS 458
Score = 57 (25.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 30/138 (21%), Positives = 66/138 (47%)
Query: 839 SSF---CLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDR 895
SSF CL++A AV PL+++L D E ++ ++ L + + SK+ + I
Sbjct: 419 SSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNL--SKHVTGKSKIAGEGLKI-- 474
Query: 896 MVRFLSSPSPKLQEKALDSVERIFRLP---EFKQKYGKSAQ-MP-LVDLTQRGNSSMKSL 950
+V L+ + E L S +F L ++ + G++ +P L+++ + + +
Sbjct: 475 LVEILNEGAKT--ETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAK 532
Query: 951 SARVLAHLNVLQDQSSYF 968
+ +LA + +L +++
Sbjct: 533 RSALLAVMGLLMQSDNHW 550
Score = 57 (25.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 37/148 (25%), Positives = 59/148 (39%)
Query: 390 GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDD--NQASRDAQELLEN 447
G + E R + + L LS+ IG+ I L+ + DD + A R A +
Sbjct: 482 GAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMG 541
Query: 448 LSFSDDNVVQMAKANYFKHLLQRLSAGPES--VKMRMATTLAEM-ELTDHHKASLLEGNV 504
L DN ++ A LL L +G S + TLA++ E D + G +
Sbjct: 542 LLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGL 601
Query: 505 LGPLLHLVSRGD--IQMKKVAVKALRNL 530
+ L S D + +K+ V + NL
Sbjct: 602 KLAVKILSSSEDSPVAVKQHCVGLILNL 629
Score = 52 (23.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 51/260 (19%), Positives = 111/260 (42%)
Query: 502 GNVLGPLL--HLVSRGDIQMKKVAVKALRNLSSVPQ-NGLQMIKEGAVGPLVDXXXXXXX 558
G ++ L L++ G+ +M AV+ +R + N ++K GAV PL+
Sbjct: 386 GKLIAKFLTSELINGGE-EMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDI 444
Query: 559 XXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQT 618
+E I++L+ + ++ + + + + +L ++N G + R L +
Sbjct: 445 RI---QENAMAGILNLSKHV----TGKSKI----AGEGLKILVEILN-EGAKTETR-LYS 491
Query: 619 FNALCRSPSAGNIKTTLTQC-SAIPVLVQLCEHDN--ENVRANAVKLFCCLVDDGDEAII 675
+AL S + + + AIP L+ + + D+ ++ + +A+ L+ D
Sbjct: 492 ASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWR 551
Query: 676 REHVGQKCLETLVTIIQSSHNEEEI-ASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLK 734
G + L+ +++S + A + L+KL E P T ++ G L + + L
Sbjct: 552 VLAAG--AVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILS 609
Query: 735 NGRQNDPNRFQVVENAVGAL 754
+ ++ P V ++ VG +
Sbjct: 610 SS-EDSP--VAVKQHCVGLI 626
Score = 51 (23.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 724 GALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLE 783
GA ++ FL + N +++ AV +R T ++ + +AG + L++LL
Sbjct: 384 GAGKLIAKFLTSELINGGE--EMIYRAVREIRVQTKTSSFN-RSCLVKAGAVTPLLKLLS 440
Query: 784 YGTTLTKEHAATSLARFSKNSLGLSR 809
+E+A + SK+ G S+
Sbjct: 441 SVDIRIQENAMAGILNLSKHVTGKSK 466
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 178 (67.7 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 38/83 (45%), Positives = 50/83 (60%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
++R S S P E L+ CPI+ +M DPV +SGQT+ER IEKWFSDG+N CP T
Sbjct: 270 NRRSSQMSVPPEELR---CPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQ 326
Query: 310 LDTSILRPNKTLRQSIEEWKDRN 332
L L PN ++ I W ++N
Sbjct: 327 LSHLCLTPNYCVKALISSWCEQN 349
Score = 84 (34.6 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 69/348 (19%), Positives = 142/348 (40%)
Query: 321 LRQSIEEWKDRNTMITIASMKPKLVST-EVEEVLHCLEQLQDLCQQRDQHREWERLANGD 379
L S+ E D + + S K K V +EE E+ + Q DQ ER
Sbjct: 368 LALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEACESEYQEDQVTLVERCTELL 427
Query: 380 DAVESI--VRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQA 437
+ + +R R +E+ ++ LL + L + G V+ + L + + ++ A
Sbjct: 428 TTLTDVDTLRKKCRVVEQIRV---LLKDDEEARILMGENGCVEALLQFLGSALNENNASA 484
Query: 438 SRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKA 497
+ L NL+ ++ ++ A+ LL+ + P S + T + L+ +A
Sbjct: 485 QKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHS---HGSVTAIYLNLSCLEEA 541
Query: 498 SLLEGNVLG-P-LLHLV-SRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXX 554
+ G+ L P +++L+ + ++Q K A+ +L +LS+ P N ++ V L
Sbjct: 542 KPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTI 601
Query: 555 XXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQR 614
E++ +++L ++ ++ + +L+ + L ++++ PN Q++
Sbjct: 602 SDEQRWT---EKSLAVLLNLVLNEAGKDEMVSAPSLVSN------LCTILDTGEPNEQEQ 652
Query: 615 ILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKL 662
+ LC + Q IP LV + + + R A KL
Sbjct: 653 AVSLLLILCNHSEI--CSEMVLQEGVIPSLVSISVNGTQRGRERAQKL 698
Score = 77 (32.2 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 54/247 (21%), Positives = 105/247 (42%)
Query: 681 QKCLETLVTI--IQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQ 738
++C E L T+ + + + + + +L K E + + G + +L FL +
Sbjct: 421 ERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMG--ENGCVEALLQFLGSAL- 477
Query: 739 NDPNRFQVVENAVGALRRFT-APTNLEWQKRAAEAGVIPKLVQLL----EYGTTLTKEHA 793
N+ N VGA+ F A N ++ +G+IP L ++L +G+ +T +
Sbjct: 478 NENN---ASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGS-VTAIYL 533
Query: 794 ATSLARFSKNSLGLSRPIPKRKGF-WCFSPPPEIGCQVHG--GLCGIESSF-----CLLE 845
S +K +G S +P W + E+ C+V L + S++ CLL
Sbjct: 534 NLSCLEEAKPVIGSSLAVPFMVNLLWTET---EVQCKVDALHSLFHL-STYPPNIPCLLS 589
Query: 846 ANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSP 905
A+ V L + + E SL L+ L+ E ++ +++ + + + L + P
Sbjct: 590 ADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKD--EMVSAPSLVSNLCTILDTGEP 647
Query: 906 KLQEKAL 912
QE+A+
Sbjct: 648 NEQEQAV 654
Score = 70 (29.7 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 36/187 (19%), Positives = 84/187 (44%)
Query: 53 IVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLK 112
I P L+ R S + L S +L + K + C++ +K+YL + ++V + +
Sbjct: 36 IFPSLEAARPRSKSGIQALCSLHVVLEK----VKNILRHCTESSKLYLAITGDSVVLKFE 91
Query: 113 DTAREISQALG-ILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQE 171
++ +L + + + + ++E + ++ +N + +++ +Q+
Sbjct: 92 KAKSSLTDSLRRVEDIVQQSIGSQLLEILMEL-ENTEFSLDPAEKEIG---DQIIGLLQQ 147
Query: 172 R-NVDRSYANHLLSLIADA---VGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQ 227
N + S N+ L + A +GI++ R+AL E K IE +RM D+ + +
Sbjct: 148 GGNFESSSDNNELEVFHQAATRLGITSSRAALT-ERRCLKKLIERARMEDDKRKESIVAY 206
Query: 228 IIALLER 234
++ L+ +
Sbjct: 207 LLHLMRK 213
Score = 61 (26.5 bits), Expect = 2.8e-15, Sum P(4) = 2.8e-15
Identities = 33/139 (23%), Positives = 59/139 (42%)
Query: 113 DTAREISQALGILPLASLDLSTDIIEEIEKVC-DNMQXXXXXXXXXXXXXLEKVESGIQE 171
+ AR S++ GI L SL + + ++ I + C ++ + EK +S + +
Sbjct: 41 EAARPRSKS-GIQALCSLHVVLEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTD 99
Query: 172 RNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIAL 231
L + D V + ++ + E E+EN+ D AE DQII L
Sbjct: 100 S----------LRRVEDIV-----QQSIGSQLLEILMELENTEFSLDPAEKEIGDQIIGL 144
Query: 232 LERA-DAASSPREKEMKYF 249
L++ + SS E++ F
Sbjct: 145 LQQGGNFESSSDNNELEVF 163
Score = 60 (26.2 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 61/276 (22%), Positives = 113/276 (40%)
Query: 491 LTDHHKASLL--EGNVLGPLLHLV----SRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
L D +A +L E + LL + + + +KV AL NL+ +++
Sbjct: 450 LKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLAS 509
Query: 545 AVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLI 604
+ PL++ + TAI +L +S + +E+ PV + S + + +L+
Sbjct: 510 GIIPLLEEMLCNPHSHG-----SVTAI-YLNLSCL-EEAK--PV--IGSSLAVPFMVNLL 558
Query: 605 NLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNEN--VRANAVKL 662
T VQ ++ + S NI L+ + L L D + ++ AV L
Sbjct: 559 -WTETEVQCKVDALHSLFHLSTYPPNIPCLLS-ADLVNALQSLTISDEQRWTEKSLAVLL 616
Query: 663 FCCLVDDGDEAIIREHVGQKCLETLVTIIQSSH-NEEEIA-SAMGILSKLPEVPQFTQWL 720
L + G + ++ + L TI+ + NE+E A S + IL E+ ++ +
Sbjct: 617 NLVLNEAGKDEMVS---APSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEI--CSEMV 671
Query: 721 LDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRR 756
L G +P +++ NG Q R Q + LR+
Sbjct: 672 LQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQ 707
Score = 47 (21.6 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 771 EAGVIPKLVQLLEYGTTLTKEHAATSLARF 800
+ GVIP LV + GT +E A L F
Sbjct: 673 QEGVIPSLVSISVNGTQRGRERAQKLLTLF 702
Score = 46 (21.3 bits), Expect = 8.1e-12, Sum P(3) = 8.1e-12
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 395 ERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELL 445
E++ AV+LLL L + + ++ +G I LV+++ + + AQ+LL
Sbjct: 649 EQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLL 699
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 182 (69.1 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQ 323
+ F C ++R VM DPV SSG TFER I+KWF +GN+ CP++ LD L+PN L+
Sbjct: 221 EKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKS 280
Query: 324 SIEEWKDRN 332
I EW +N
Sbjct: 281 QISEWCAKN 289
Score = 80 (33.2 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 32/162 (19%), Positives = 70/162 (43%)
Query: 45 ELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNC 104
EL ++RI+ + ++ S G+ + +L+ + K+L CS+ +K+Y+ +
Sbjct: 22 ELKRLVDRIMRIFPDIEDARPGCSSGIQTLC-LLHNALDKTKQLLQYCSESSKLYMAVTG 80
Query: 105 RAIVKRLKDTAREISQALG----ILP-LASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXX 159
AI+ R + + Q L I+P + + +S I++++ ++
Sbjct: 81 DAILARGSRAKKSLEQCLNDIRSIVPTILEIKIS-QIVQDLRSTQLTLEFSEEEAGKAIR 139
Query: 160 XXLEKVESGIQERNVDRSYANHLLSL-IADAVGISTERSALK 200
++K S + + + L L ++ I TER +LK
Sbjct: 140 ELMQKSTSSSASPDEIKDFHYAALKLQLSTPEAIVTERRSLK 181
Score = 61 (26.5 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 52/254 (20%), Positives = 105/254 (41%)
Query: 463 YFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKA-SLLEGNVLGPLLHLVSRGDIQMKK 521
Y K+ L+R E +K + LA L+ + +A LE V + + ++ ++
Sbjct: 425 YLKNALERNGTAGEIIKGGLDLLLAF--LSGNRRAIESLEEEVF-KMFSVFLESEVVAEE 481
Query: 522 VAVKALRNLSSVPQNGLQMIKEGAVGPL---VDXXXXXXXXXXXXREETATAIMHLAVST 578
A+ L LS+ P ++ G++ L V+ + ++ M + +
Sbjct: 482 -ALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLEM 540
Query: 579 MYQESSQTPVTLLESDKEIFMLFSLINLTG--PNVQQRILQTFNALCRSPSAGNIKTTLT 636
+ + Q + L+ +++F S+I L + R T C + A +++ +
Sbjct: 541 VSLDFIQKLTSFLQ--QKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVP 598
Query: 637 --QCSAIPVLVQLCEHDNEN---VRANAVKLFCCLV---DDGDEAIIREHVGQKCLETLV 688
Q +AI +L+QLC E V A ++ L+ ++G E + + + L LV
Sbjct: 599 EEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEV--KVSASELLRALV 656
Query: 689 TIIQSSHNEEEIAS 702
+ EEE++S
Sbjct: 657 EVDSDKEEEEEVSS 670
Score = 42 (19.8 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 868 LDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVER-IFRL 921
L+ L+T ++ +NG+ +D ++ FLS +A++S+E +F++
Sbjct: 419 LEPLITYLKNALERNGTAGEIIKGGLDLLLAFLSG-----NRRAIESLEEEVFKM 468
Score = 40 (19.1 bits), Expect = 8.9e-13, Sum P(3) = 8.9e-13
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 421 GCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHL 467
G + L+ + S A L+NLS S + ++M ++ + L
Sbjct: 503 GSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQKL 549
Score = 39 (18.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 6/37 (16%), Positives = 22/37 (59%)
Query: 882 NGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI 918
+G + + ++ +++ + S + LQE+A+ +++ +
Sbjct: 494 HGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNL 530
Score = 38 (18.4 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 337 IASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEER 396
+AS+ L S EE + + L LC Q+ ++ + D S++ EE
Sbjct: 586 LASIAELLESNVPEEQENAISILLQLCVQKIEYCCLV-VREATDIYSSLILISNNGTEEV 644
Query: 397 KLAVALLL 404
K++ + LL
Sbjct: 645 KVSASELL 652
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 197 (74.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 77/294 (26%), Positives = 137/294 (46%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ D+M DPV S+GQT++R++I+ W + GN CP+T L L PN TLR+ I
Sbjct: 18 FRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLRRLI 77
Query: 326 EEWKDRNTMITIASMK-PKLVSTEVEEVLHCLEQLQDLC----QQRDQHREWERLAN-GD 379
+EW N + + PK + + V L Q + R + RL
Sbjct: 78 QEWCVANRSNGVERIPTPKQPADPIS-VRSLLSQASAITGTHVSVRSRAAAIRRLRGLAR 136
Query: 380 DAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASR 439
D+ ++ V G E + + L ++ T +L ++ +L+L+ M ++ +
Sbjct: 137 DSEKNRVLIAGHNAREILVRI-LFADIET-TSLSSELVSESLALLVLLHMTETECEAVAS 194
Query: 440 DAQEL--LENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKA 497
D + + L F D+ +++ + N L++ + G +S+ +++ + ++
Sbjct: 195 DPSRVGFMTRLLF--DSSIEI-RVNAAA-LIEMVLTGAKSMDLKLIISGSD--------- 241
Query: 498 SLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
S+ EG VL L + +S + K+ +KA+ L V Q I GA G L+D
Sbjct: 242 SIFEG-VLDLLKNPISSR--RALKIGIKAIFALCLVKQTRHLAISAGAPGILID 292
Score = 46 (21.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 909 EKALDSVERIFRLPEFKQKYGKSA-QMPLV 937
E+ L +VE + RLPE +G+ A +PL+
Sbjct: 304 ERGLATVELLCRLPEGCAAFGEHALTVPLM 333
Score = 46 (21.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 31/141 (21%), Positives = 57/141 (40%)
Query: 665 CLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPE-VPQFTQWLLDA 723
CLV I ++ L E +A+ + +L +LPE F + L
Sbjct: 272 CLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLAT-VELLCRLPEGCAAFGEHAL-- 328
Query: 724 GALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLE 783
+P+++ + R +D + E A GAL + AA AG++ +L+ L++
Sbjct: 329 -TVPLMVKTIL--RVSD----RATEYAAGALLALCTAEE-RCRDEAAAAGLVTQLLLLVQ 380
Query: 784 YGTTLTKEHAATSLARFSKNS 804
T + A L + ++S
Sbjct: 381 SDCTERAKRKAQMLLKLLRDS 401
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 187 (70.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 258 QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKW-FSDGNNLCPLTMTVLDTSILR 316
Q +E F CPI+ D+M DPV S+G T++R +IEKW FS N CP+T V+ + L
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 317 PNKTLRQSIEEWKDRNTMITIASM---KPKLVSTEVEEVL 353
PN TLR+ I+ W N I + KP + +E+E+++
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLI 102
Score = 56 (24.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 32/128 (25%), Positives = 54/128 (42%)
Query: 672 EAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQW-LLDAGALPIVL 730
++++ G ++TL I+Q E +A+ +L KL EV Q LL+ V+
Sbjct: 203 KSLLNNKKGTNLVKTLTKIMQRGIYESRAYAAL-LLKKLLEVADPMQIILLERELFGEVI 261
Query: 731 NFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTK 790
L +D + +A+ L T P K A E G I +++LL T +
Sbjct: 262 QIL-----HDQISHKATRSAMQILV-ITCPWGRNRHK-AVEGGTISMIIELL-MDDTFSS 313
Query: 791 EHAATSLA 798
E + +A
Sbjct: 314 ERRNSEMA 321
Score = 38 (18.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 378 GDDAVESIVRSLGRRIEERKLAVALLLE 405
G + V+++ + + R I E + ALLL+
Sbjct: 211 GTNLVKTLTKIMQRGIYESRAYAALLLK 238
Score = 38 (18.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 767 KRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKR 814
KR EA +P+ + + + T ++SL+ + N + S + R
Sbjct: 130 KRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 177
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 182 (69.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 45/131 (34%), Positives = 68/131 (51%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV S+G T++R +I++W DGNN CP TM +L PN TL + I
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 326 EEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQ---D-------LCQQRDQHREWERL 375
+ W D S P+ + +E+ +E+ + D ++ D++RE+ L
Sbjct: 75 DHWSDSINR-RADSESPESDTPTRDEINAAIERFRIENDARSKILRFARESDENREF--L 131
Query: 376 ANGDDAVESIV 386
A DD V +V
Sbjct: 132 AGKDDFVAMLV 142
Score = 52 (23.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 22/104 (21%), Positives = 45/104 (43%)
Query: 821 SPPPEIGCQVHGGLCGIESSFCLLEANA---VRPLVRVLE-DPDHGACEASLDALVTLIE 876
+P +I C +++ L+ A V +++++ D D EA+L L+ +
Sbjct: 202 NPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIAS 261
Query: 877 GERLQNGSKVLEDANAIDRMVRFLSSP--SPKLQEKALDSVERI 918
+R++ L + ++ L+ P S + EK L +E I
Sbjct: 262 SKRVK---LALIREKLVTKLTSLLTDPTTSVSVTEKCLKLLEAI 302
Score = 38 (18.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 655 VRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAM---GILSKLP 711
+R V L+ D ++ V +KCL+ L I EI + +++KL
Sbjct: 270 IREKLVTKLTSLLTDPTTSV---SVTEKCLKLLEAISSCKEGRSEICDGVCVETVVNKLM 326
Query: 712 EV 713
+V
Sbjct: 327 KV 328
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 191 (72.3 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 92/398 (23%), Positives = 174/398 (43%)
Query: 48 AYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAI 107
A L R V +L L L S +S+ + + + A++L + +K+ M A
Sbjct: 24 ADLSRRVRLLAPLLDH-LPASSSSSSSTPLADA-LGAARDLLRKTRDGSKIDQAMRGDAF 81
Query: 108 VKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVES 167
+ R+I AL LP + + ++ E++ V Q +
Sbjct: 82 LDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVHSQFQRASTRTDPPDTQLSMDLAW 141
Query: 168 GIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQ 227
+ + D + LL+ I+ + + T + +K E + + ++ D +DQ
Sbjct: 142 ALTDNPSDPA----LLTRISHKLQLHT-MADMKNESIALHNMVISTAGEPDGC----VDQ 192
Query: 228 IIALLERA-DAASSPREKEMKYFSKRKSLGSQ-PLEPLQSFYCPITRDVMVDPVETSSGQ 285
+ +LL++ D + ++ S+ + P+ P F CPI+ ++M DPV SSGQ
Sbjct: 193 MSSLLKKLKDCVVTEDHANDALTTRSASIKHRSPIIP-DEFRCPISLELMQDPVIVSSGQ 251
Query: 286 TFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKL- 344
T+ERS I+KW G+ CP T L + L PN L+ I +W + N I + K
Sbjct: 252 TYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANG-IELPKNKQNSR 310
Query: 345 --VSTEVEEVLHC-LEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKL-AV 400
+ + + H L L + + R +++ +R A G+ + + R++ RI + A+
Sbjct: 311 DKKAAKSSDYDHAGLVSLMN--RLRSGNQDEQRAAAGEIRLLA-KRNVNNRICIAEAGAI 367
Query: 401 ALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS 438
LL+ L + + R Q + + L+ ++ ++N+AS
Sbjct: 368 PLLVNLLSSSDPRTQ----EHAVTALLNLSIHENNKAS 401
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 72/296 (24%), Positives = 127/296 (42%)
Query: 268 CPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVL-DTSILRPNKTLRQS-I 325
C +T D D + T S RS I D CP+++ ++ D I+ +T +S I
Sbjct: 203 CVVTEDHANDALTTRSASIKHRSPI---IPDEFR-CPISLELMQDPVIVSSGQTYERSCI 258
Query: 326 EEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQ-------QRDQHREWERLANG 378
++W D + +P L T + + C+ + Q+ ++ A
Sbjct: 259 QKWLDSGHKTCPKTQQP-LSHTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKS 317
Query: 379 DD----AVESIVRSL--GRRIEERKLA--VALLLELSTCNTLRDQIGDVQGCILLLVTMA 430
D + S++ L G + E+R A + LL + + N R I + G I LLV +
Sbjct: 318 SDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNN--RICIAEA-GAIPLLVNLL 374
Query: 431 SSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEME 490
SS D + A L NLS ++N + ++ +++ L G + A TL +
Sbjct: 375 SSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLS 434
Query: 491 LTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAV 546
+ D +K ++ + PL++L+ G + KK A A+ NL N ++ +K G V
Sbjct: 435 VVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIV 490
Score = 147 (56.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/264 (20%), Positives = 122/264 (46%)
Query: 418 DVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPES 477
D G + L+ + S + ++ A E+ + +N + +A+A L+ LS+
Sbjct: 321 DHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPR 380
Query: 478 VKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNG 537
+ T L + + +++KAS+++ + + ++ ++ G ++ ++ A L +LS V +N
Sbjct: 381 TQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENK 440
Query: 538 LQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEI 597
+ + GA+ PL++ +++ ATAI +L + YQ + V +++ I
Sbjct: 441 VTIGAAGAIPPLINLLCDGSPRG---KKDAATAIFNLCI---YQGNK---VRAVKAGIVI 491
Query: 598 FMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRA 657
++ L++ TG + + L + L +P K + + IP LV++ + + R
Sbjct: 492 HLMNFLVDPTGGMIDEA-LSLLSILAGNPEG---KIVIARSEPIPPLVEVIKTGSPRNRE 547
Query: 658 NAVKLFCCLVD-DGDEAIIREHVG 680
NA + L D ++ + + G
Sbjct: 548 NAAAILWLLCSADTEQTLAAKAAG 571
Score = 146 (56.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 72/301 (23%), Positives = 143/301 (47%)
Query: 677 EHVGQKCLETLVTIIQSSHNEEEIASA--MGILSKLPEVPQFTQWLLDAGALPIVLNFLK 734
+H G L +L+ ++S + +E+ A+A + +L+K + + +AGA+P+++N L
Sbjct: 321 DHAG---LVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRIC--IAEAGAIPLLVNLLS 375
Query: 735 NGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAA 794
+ +DP R Q E+AV AL + N + ++ IPK+V++L+ G+ T+E+AA
Sbjct: 376 S---SDP-RTQ--EHAVTALLNLSIHENNK--ASIVDSHAIPKIVEVLKTGSMETRENAA 427
Query: 795 TSLARFS-----KNSLGLSRPIPKRKGFWCFSPP--PEIGCQVHGGLCGIESSFC-LLEA 846
+L S K ++G + IP C P + LC + + ++A
Sbjct: 428 ATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKA 487
Query: 847 NAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPK 906
V L+ L DP G + +L +L++++ G G V+ + I +V + + SP+
Sbjct: 488 GIVIHLMNFLVDPTGGMIDEAL-SLLSILAGN--PEGKIVIARSEPIPPLVEVIKTGSPR 544
Query: 907 LQEKALDSVERIFRLPEFKQKYGKSAQMP--LVDLTQRGNSSMKSLSARVLAHLNVLQDQ 964
+E A + + + K+A + L +L++ G K ++ +L ++ +
Sbjct: 545 NRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANED 604
Query: 965 S 965
S
Sbjct: 605 S 605
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 82/298 (27%), Positives = 132/298 (44%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNL-CPLTMTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV +GQT++R++IE W S GNN CP+T L L PN TLR+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTLRRL 77
Query: 325 IEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVES 384
I+EW N + + + V L Q + R R A A+
Sbjct: 78 IQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS--RAA----ALRR 131
Query: 385 IVRSLGRRIEERKLAVA------LLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQ-- 436
+ R R ++ ++ +A +L+++ T ++ V + LLV + ++ NQ
Sbjct: 132 L-RGFARDSDKNRVLIAAHNATEILIKILFSETTSSEL--VSESLALLVMLPITEPNQFV 188
Query: 437 -ASRDAQ--ELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTD 493
S D E L L F D ++ A L++ +S G +S ++ + + +E
Sbjct: 189 SISSDPGRVEFLTRLLF-DSSIETRVNA---AALIEIVSTGTKSADLKGSISNSE----- 239
Query: 494 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
S+ EG VL L + +S + K+ +K L L SV I GA L+D
Sbjct: 240 ----SVFEG-VLDLLRNPISSR--RALKIGIKTLFALCSVKSTRHIAITAGAPEILID 290
Score = 57 (25.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 745 QVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNS 804
+ E A GAL W++ AA AGV+ +L+ +++ T + A L + ++S
Sbjct: 341 RATEYAAGALLALCTAEE-RWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDS 399
Score = 50 (22.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 24/100 (24%), Positives = 40/100 (40%)
Query: 613 QRILQTFNALCRSPS--AGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDG 670
+R L T LCR+P A + LT + ++++ + E A A+ C
Sbjct: 302 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYA-AGALLALCT----A 356
Query: 671 DEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKL 710
+E E G + L+ ++QS E A +L L
Sbjct: 357 EERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLL 396
Score = 45 (20.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 909 EKALDSVERIFRLPEFKQKYGKSA-QMPLV 937
E+AL +VE + R PE +G+ A +PL+
Sbjct: 302 ERALATVELLCRTPEGCAAFGEHALTVPLL 331
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 195 (73.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 67/317 (21%), Positives = 138/317 (43%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV +G T++R++I++W GNN CP TM +L PN+TL++ I
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLI 73
Query: 326 EEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESI 385
E W D T +L + +E+ +++++ ++RD ++ +
Sbjct: 74 EIWSDSVRRRTCVE-SAELAAPTRDEIADAIDRVKIEKEERDDREVLSKIVRFGRESDDN 132
Query: 386 VRSLGRRIEERKLAVALL--LELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQE 443
L + + KL V L+ ++ T + + + VQ + +L T+ S +
Sbjct: 133 RGFLAGKDDFVKLLVDLINQVDFETTSAAKSLV--VQEAVKILSTIRS-----------K 179
Query: 444 LLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGN 503
+ + FS N++ + ++ G +K+ A L + + K + E +
Sbjct: 180 VSDRRRFS--NLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERD 237
Query: 504 -VLGPLLHLVSR-GDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXX 561
++ L+ +S+ D+ + + ++ L +SS + L +++E +G +
Sbjct: 238 GLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLS 297
Query: 562 XXREETATAIMHLAVST 578
E ++ + ST
Sbjct: 298 VSVTEKCLKLLEILAST 314
Score = 37 (18.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 679 VGQKCLETLVTIIQSSHNEEEIASAMG 705
V +KCL+ L + + EI G
Sbjct: 300 VTEKCLKLLEILASTKEGRSEICGGDG 326
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 135 (52.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 247 KYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
K SK P+E + F C ++ +M++P+ +SGQTFE+S I +W CP T
Sbjct: 50 KIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRT 108
Query: 307 MTVLDTSILRPNKTLRQSIEEW 328
VL + PN + + I+EW
Sbjct: 109 KQVLYHRFMIPNHLINEVIKEW 130
Score = 95 (38.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 31/125 (24%), Positives = 54/125 (43%)
Query: 425 LLVTMASSDDNQAS--RDAQELLENLSFSDDNVVQMAKANYFKHLLQR-LSAGPESVKMR 481
LL ++ S+D+ + L S S+ N +A+ LL + + G ++
Sbjct: 201 LLTPLSISEDSNPEFLENIVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIH 260
Query: 482 MATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI 541
A T+ + TD +K + VL L+H++ GD A AL NL V + + +
Sbjct: 261 SAATVNSLSYTDSNKIIIGNSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAV 320
Query: 542 KEGAV 546
EG +
Sbjct: 321 SEGLI 325
Score = 61 (26.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 745 QVVENAVGALRRFTAPTNLEWQKRAAEAG-VIPKLVQLLEYGTTLTKEHAATSLARFS 801
+ +EN V AL F+ T+ + + AE V+P L + ++ GT LT+ H+A ++ S
Sbjct: 214 EFLENIVTALHIFS--TSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLS 269
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 140 (54.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 39/139 (28%), Positives = 65/139 (46%)
Query: 193 STERSA--LKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA-DAASSPREKEMKYF 249
STE +A L++E + +EI N D+ E ++ ++ A + R+ E
Sbjct: 4 STETNADTLRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVE---- 59
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
SK P+E + F C ++ +M++PV +SGQT+E+ I +W CP T V
Sbjct: 60 SKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQV 118
Query: 310 LDTSILRPNKTLRQSIEEW 328
L + PN + I +W
Sbjct: 119 LSHRLWIPNHLISDLITQW 137
Score = 90 (36.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 425 LLVTMASSDDN-QASRDAQE----LLENLSFSDDNVVQMAKANYFKHLLQR-LSAGPESV 478
LL +++ D+ +S + QE L NLS + N +A+ LL + L G +
Sbjct: 209 LLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDET 268
Query: 479 KMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGL 538
+ A TL+ + D +K + + L+ L+ GD+ K A + NL V +N
Sbjct: 269 RRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKG 328
Query: 539 QMIKEGAV 546
+++ G +
Sbjct: 329 KVVSAGLI 336
Score = 63 (27.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/143 (24%), Positives = 67/143 (46%)
Query: 418 DVQGCILLLVTMASSDDNQASRDAQELL-ENLSFSDDNVVQMAKAN-YFKHLLQRLSAGP 475
D++ +L V+ +SS +Q A+EL + F + V +A + LL LS
Sbjct: 160 DIEA-LLQRVSSSSSVADQIEA-AKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLD 217
Query: 476 ESV------KMRMATTLAEMELTDHHKASLLEGNVLGPLL-HLVSRGDIQMKKVAVKALR 528
E+V + + T L + + + +K + E ++ PLL + +G + ++ A L
Sbjct: 218 EAVDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLS 277
Query: 529 NLSSVPQNGLQMIKEGAVGPLVD 551
+LS++ N + + AV L+D
Sbjct: 278 SLSAIDSNKIIIGNSEAVKALID 300
Score = 59 (25.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 684 LETLVTIIQSSHN-EEEIASAMGILSKLPEVPQFTQWLLDAG---ALPIVLNFLKNGRQN 739
+E L+ + SS + ++I +A + + + P + + AG ++ +L+ L +
Sbjct: 161 IEALLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFV-AGIHDSITRLLSPLSTLDEA 219
Query: 740 DPNRFQVVENAVGALRRFTAPTNLEWQKR--AAEAGVIPKLVQLLEYGTTLTKEHAATSL 797
+ ++ EN V AL + LE K A VIP L + L+ GT T+ +AA +L
Sbjct: 220 VDSSLELQENIVTALFNLSI---LESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATL 276
Query: 798 ARFS 801
+ S
Sbjct: 277 SSLS 280
Score = 57 (25.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 28/131 (21%), Positives = 54/131 (41%)
Query: 375 LANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDD 434
L+ D+AV+S SL ++E V L LS + + I + I LL
Sbjct: 213 LSTLDEAVDS---SL--ELQEN--IVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGT 265
Query: 435 NQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDH 494
++ R+A L +LS D N + + + K L+ + G +T+ + +
Sbjct: 266 DETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLE 325
Query: 495 HKASLLEGNVL 505
+K ++ ++
Sbjct: 326 NKGKVVSAGLI 336
Score = 50 (22.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 632 KTTLTQ-CSAIPVLVQLCEHDNENVRANAVKLFCCL-VDDGDEAIIREHVGQKCLETLV 688
KT + + C IP+L + + + R NA L D ++ II K L L+
Sbjct: 244 KTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLI 302
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 166 (63.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 245 EMKYFSKRKSLGSQPLEPLQS-FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLC 303
E K ++ + L + S F CPI+ + M DPV +GQT+ERS I KWF+ G+ C
Sbjct: 42 EKKKLDLKEMISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTC 101
Query: 304 PLTMTVLDTSILRPNKTLRQSIEEW 328
P TM L ++ PNKTL Q I W
Sbjct: 102 PTTMQELWDDLVTPNKTLHQLIYTW 126
Score = 58 (25.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDD-GDEA-IIREHVGQKCLETLVT 689
K L Q + + ++V + + + N +L LV++ G A ++ H L L+
Sbjct: 220 KAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSH---SLLVGLMR 276
Query: 690 IIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFL 733
+++ ++ A+ +L + Q L+ GA+P +++ L
Sbjct: 277 LVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVL 320
Score = 43 (20.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 418 DVQG-CILLLVTMASSDDNQASRDAQELLENL---SFSDDNVVQMAKANYFKHLLQRLSA 473
DVQG I +L T+ + EL + + + + VV LL ++
Sbjct: 140 DVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTS 199
Query: 474 GPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMK 520
+V L +EL KA L++ + ++ +++ G I+ K
Sbjct: 200 --HAVGSEAIAILVNLELDSDSKAGLMQPARVSLMVDMLNDGSIETK 244
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 189 (71.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 93/435 (21%), Positives = 181/435 (41%)
Query: 117 EISQALGILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDR 176
++ +AL LP D+S ++ E++E ++ K S + E ++R
Sbjct: 110 KLEKALSNLPYDLYDISDEVGEQVELARSQLRRAMQRYGSLNS---NKFSSALSEP-MER 165
Query: 177 SYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERAD 236
++++ + A+ E + F E + + + +R+ + + +A D
Sbjct: 166 DGFSNVIKIKAEE---KLESVSETLHFGEEEEKQSSPPLRRSSSIS------LAYYLSKD 216
Query: 237 AASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWF 296
A + +K M + +S S L F CP++ ++M DPV ++GQT+ER+ I++W
Sbjct: 217 ADTDRLDK-MVNKNTDESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI 275
Query: 297 SDGNNLCPLTMTVLDTSILRPNKTLRQSIEEW-KDRNTMITIASMKPKLVSTEVEEVLHC 355
GN CP T L+ L PN LR I W + N + + ++ V+
Sbjct: 276 DCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRA 335
Query: 356 LEQLQDLCQQRDQHR---EWERLA--NGDD--------AVESIVRSL-GRRIEERKLAVA 401
L Q D+ E L+ + D+ A+ +V L + ++ A+
Sbjct: 336 LVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAIT 395
Query: 402 LLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKA 461
+L LS ++ I G + +V + + +A +A L +LS +D+N + + +
Sbjct: 396 CVLNLSIYENNKELIM-FAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGS 454
Query: 462 NYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKK 521
L+ L G K AT L + + +K + ++ L+ ++S D +
Sbjct: 455 GAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLS--DSTRHR 512
Query: 522 VAVKALRNLSSVPQN 536
+ +AL LS + N
Sbjct: 513 MVDEALTILSVLANN 527
Score = 178 (67.7 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 106/495 (21%), Positives = 207/495 (41%)
Query: 186 IADAVGISTE--RSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLE-RADAASSPR 242
I+D VG E RS L++ + S + +++ +E ++ D +++ +A+
Sbjct: 125 ISDEVGEQVELARSQLRRAMQRYGS-LNSNKFSSALSEPMERDGFSNVIKIKAEEKLESV 183
Query: 243 EKEMKYFSKRKSLGSQPLEPLQSFYCP--ITRDVMVDPVETSSGQ-TFERSAIEKWFSDG 299
+ + + + + S PL S +++D D ++ + T E +K
Sbjct: 184 SETLHFGEEEEKQSSPPLRRSSSISLAYYLSKDADTDRLDKMVNKNTDESKKSDKLTIPV 243
Query: 300 NNLCPLTMTVL-DTSILRPNKTLRQS-IEEWKDRNTMITIASMKPKLVSTEVEE--VLHC 355
+ LCP+++ ++ D I+ +T ++ I+ W D + T + KL + + VL
Sbjct: 244 DFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNL-TCPKTQQKLENFTLTPNYVLRS 302
Query: 356 LEQLQDLCQQR--DQHREW--ERLANGDD--AVESIVRSLGRR-IEERKLAVALLLELST 408
L + C + +Q + R N D + ++V+ L R E+R+ AV+ + LS
Sbjct: 303 L--ISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 360
Query: 409 CNT-LRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHL 467
+T R I + G I +LV + +S+D +A + NLS ++N + A +
Sbjct: 361 RSTDNRILIAEA-GAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSI 419
Query: 468 LQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKAL 527
+Q L AG + A TL + L D +K + + L+ L+ G + KK A AL
Sbjct: 420 VQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATAL 479
Query: 528 RNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTP 587
NL N + ++ G V LV +E T + LA ++Q
Sbjct: 480 FNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMV--DEALTILSVLA-------NNQDA 530
Query: 588 VTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQL 647
+ + + L ++ ++ +LC+ + I T+ + A+ L+ L
Sbjct: 531 KSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLI--TIGRLGAVVPLMDL 588
Query: 648 CEHDNENVRANAVKL 662
++ E + A+ L
Sbjct: 589 SKNGTERGKRKAISL 603
Score = 39 (18.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 182 LLSLIADAVGISTERSALKKE 202
LL LIAD V I KK+
Sbjct: 11 LLDLIADIVEIPLNTGMFKKD 31
Score = 37 (18.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 123 GIL-PLASLDLSTDIIE 138
GI+ P + LDL DI+E
Sbjct: 4 GIVSPASLLDLIADIVE 20
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 85/305 (27%), Positives = 128/305 (41%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVL-DTSILRPNKTLRQS 324
F CPI+ ++M DPV SG TF+R +I++W GN CP+T L +T L PN LR
Sbjct: 9 FRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHALRSL 68
Query: 325 I---------EEWKDRNTMITIASMKPKLVSTEVEEV---LHCLEQLQDLCQQRDQHREW 372
I E + R S L+ST V + LE L L + +
Sbjct: 69 ILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSI 128
Query: 373 ERLANGDDAVESI---VRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTM 429
R AV + V S + ++E+ L++ L L L N + + D G I +VT+
Sbjct: 129 RRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKV-GLVAD--GVIRRIVTV 185
Query: 430 ASSDDNQASRDAQELLENLSFSDDNVVQMAK-ANYFKHLLQRLSAGPESVKMRMATTL-A 487
A LL +L+ + N + + L+ L G + + AT L A
Sbjct: 186 LRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATALYA 245
Query: 488 EMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIK-EGAV 546
D+ K + G+V P+L V D +++ AV+ L L +M K G V
Sbjct: 246 LCSFPDNRKRVVDCGSV--PIL--VEAADSGLER-AVEVLGLLVKCRGGREEMSKVSGFV 300
Query: 547 GPLVD 551
LV+
Sbjct: 301 EVLVN 305
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 168 (64.2 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 37/90 (41%), Positives = 53/90 (58%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ D+M DPV S+G T++R +IE W + GN CP+T TVL T PN T+R+ I
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIRKMI 94
Query: 326 EEW---KDRNTMITIASMKPKLVSTEVEEV 352
+ W K + I + + L+ EV E+
Sbjct: 95 QGWCVEKGSPLIQRIPTPRVPLMPCEVYEI 124
Score = 52 (23.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 18/84 (21%), Positives = 39/84 (46%)
Query: 837 IESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRM 896
I S F LE V V ++ D ++ CE +L L + E E +V ++A + +
Sbjct: 290 IASEF--LEIGLVSITVEMIVDAENSVCEKALAVLDAICETEH--GREEVRKNALVMPLL 345
Query: 897 VRFLSSPSPKLQEKALDSVERIFR 920
V+ ++ S ++ + ++++
Sbjct: 346 VKKIAKVSELATRSSMSMILKLWK 369
Score = 52 (23.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 27/130 (20%), Positives = 60/130 (46%)
Query: 611 VQQRILQTFNALCR-SPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDD 669
V+ + + L R S S+ + K++L + +++Q E +E + V + ++ D
Sbjct: 252 VENGVAEALVKLIRDSVSSSSTKSSLI--AIYQMVLQKPEIASEFLEIGLVSITVEMIVD 309
Query: 670 GDEAIIREHVGQKCLETLVTIIQSSHNEEEI---ASAMGILSKLPEVPQFTQWLLDAGAL 726
+ ++ +K L L I ++ H EE+ A M +L K ++ + ++ L ++
Sbjct: 310 AENSVC-----EKALAVLDAICETEHGREEVRKNALVMPLLVK--KIAKVSE-LATRSSM 361
Query: 727 PIVLNFLKNG 736
++L K G
Sbjct: 362 SMILKLWKTG 371
Score = 48 (22.0 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 17/101 (16%), Positives = 43/101 (42%)
Query: 610 NVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDD 669
+V ++ L +A+C + G + +P+LV+ +E +++ + L
Sbjct: 313 SVCEKALAVLDAICETEH-GR-EEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKT 370
Query: 670 GDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKL 710
G+ + + V + ++ ++Q + EE A +L +
Sbjct: 371 GNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMM 411
Score = 42 (19.8 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 514 RGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVG 547
RGD + V ++ ++ L + + + E +VG
Sbjct: 134 RGDYEKCGVIIEKIKKLGDESEKNRKCVNENSVG 167
Score = 40 (19.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 728 IVLNFLKNGRQNDPNRFQVVENAVG 752
I+ K G +++ NR V EN+VG
Sbjct: 143 IIEKIKKLGDESEKNRKCVNENSVG 167
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 166 (63.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV +G T++R++I++W GNN CP TM +L T PN TL++ I
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLI 75
Query: 326 EEWKD 330
W D
Sbjct: 76 NIWSD 80
Score = 53 (23.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 853 VRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPS---PKLQE 909
+ + E D EASL L+T+ + +R++ SK++ A AI ++ L + + + E
Sbjct: 240 ISITESSDPSLIEASLSFLITISKSKRVR--SKLIA-AKAITKIKDILLTETLTNVAVTE 296
Query: 910 KALDSVERI 918
K+L +E +
Sbjct: 297 KSLKLLETL 305
Score = 50 (22.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 20/121 (16%), Positives = 54/121 (44%)
Query: 502 GNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMI-KEGAVGPLVDXXXXXXXXX 560
G+ L +L + RG+++ K +V+ L +S ++ L + ++G + ++
Sbjct: 188 GDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSD 247
Query: 561 XXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFN 620
E + + ++ ++ S + S + K+I + +L N+ ++L+T +
Sbjct: 248 PSLIEASLSFLITISKSKRVR-SKLIAAKAITKIKDILLTETLTNVAVTEKSLKLLETLS 306
Query: 621 A 621
+
Sbjct: 307 S 307
Score = 47 (21.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 37/160 (23%), Positives = 71/160 (44%)
Query: 347 TEVEEVLHCLEQLQDLCQQRDQHREWERLAN-GDDAVESIVRSLGRRIEERKLAVALLLE 405
T++E V+ + L + R++ LAN G D + +I+ ++ R E K+ +L+
Sbjct: 156 TKIELVIMAIRILDSIKVDRERLSNL-MLANDGGDCLTAILLAIQRGNLESKIESVRVLD 214
Query: 406 -LSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYF 464
+S + I + G +L M S S D + +LSF ++ ++K+
Sbjct: 215 WISFDAKSKLMIAERDG---VLTEMMKSISITESSDPSLIEASLSF----LITISKS--- 264
Query: 465 KHLLQRLSAGPESVKMR---MATTLAEMELTDHHKASLLE 501
K + +L A K++ + TL + +T+ LLE
Sbjct: 265 KRVRSKLIAAKAITKIKDILLTETLTNVAVTEK-SLKLLE 303
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 242 REKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNN 301
R K MK + K + P F CPITR++M DPV + G ++ER AIE W S N
Sbjct: 398 RSKVMKKIEELKMVPVYNGTP-DEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNR 456
Query: 302 LCPLTMTVLDTSILRPNKTLRQSIEEW 328
P+T L T++L PN+TL+ +I W
Sbjct: 457 TSPMTNLPLQTTLLTPNRTLKMAIFRW 483
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 68/289 (23%), Positives = 123/289 (42%)
Query: 377 NGDDAVESIVRSLGRR--IEERKLAVALLLELSTCNTLRDQIGDVQ-GCILLLVTMASSD 433
N DD + +V L I+E+K A A+ + L + N ++I + G I L+++ SS
Sbjct: 59 NSDDLINHLVSHLDSSYSIDEQKQA-AMEIRLLSKNKPENRIKIAKAGAIKPLISLISSS 117
Query: 434 DNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTD 493
D Q + NLS D+N +A + K L++ L G + K A L + +
Sbjct: 118 DLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIE 177
Query: 494 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXX 553
+K ++ + L++L+ G + KK A AL +L S +N ++ ++ G + PLV+
Sbjct: 178 ENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELM 237
Query: 554 XXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQ 613
+ + +M L +S ES P + E + L ++ + ++
Sbjct: 238 ADFGSNMV----DKSAFVMSLLMSV--PESK--PAIVEEGGVPV--LVEIVEVGTQRQKE 287
Query: 614 RILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKL 662
+ LC +T + + AIP LV L + + A L
Sbjct: 288 MAVSILLQLCEESVV--YRTMVAREGAIPPLVALSQAGTSRAKQKAEAL 334
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 58/281 (20%), Positives = 124/281 (44%)
Query: 433 DDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELT 492
+ QA+ + + L +N +N +++AKA K L+ +S+ ++ T + + L
Sbjct: 79 EQKQAAMEIRLLSKN---KPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLC 135
Query: 493 DHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDX 552
D +K S+ + PL+ + G K+ A AL LS + +N + + + GA+ LV+
Sbjct: 136 DENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNL 195
Query: 553 XXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQ 612
+++ +TA+ L + + + ++S + L L+ G N+
Sbjct: 196 LETGGFRA---KKDASTALYSLC------SAKENKIRAVQSGI-MKPLVELMADFGSNMV 245
Query: 613 QRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDE 672
+ + L P + K + + +PVLV++ E + + AV + L ++
Sbjct: 246 DKSAFVMSLLMSVPES---KPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEES-- 300
Query: 673 AIIREHVGQK-CLETLVTIIQSSHNE-EEIASAMGILSKLP 711
+ R V ++ + LV + Q+ + ++ A A+ L + P
Sbjct: 301 VVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQP 341
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 157 (60.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 43/143 (30%), Positives = 70/143 (48%)
Query: 187 ADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQ-MDQIIALLERADAASSPREKE 245
ADA + + L++E + +E N KD+ E V+ +D+ I +L R S + K
Sbjct: 6 ADATETNADTLTLRRELKKVLTENLNDGGVKDRVETVKSIDEAIRILNRLKIVESKKRK- 64
Query: 246 MKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPL 305
R+S S +E + F C +++ +M+DPV SGQT+E+ I +W + + CP
Sbjct: 65 ------RES-DSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPT 116
Query: 306 TMTVLDTSILRPNKTLRQSIEEW 328
VL L PN + + I W
Sbjct: 117 AKQVLYRVCLTPNHLINELITRW 139
Score = 64 (27.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 471 LSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLL-HLVSRGDIQMKKVAVKALRN 529
+ + PE ++ + T L M + +K L E + + PLL + +G + ++ A L +
Sbjct: 226 VDSNPE-LQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLAS 284
Query: 530 LSSVPQNGLQMIKEGAVGPLVD 551
LS + N + + A+ L+D
Sbjct: 285 LSDIDSNKIIIGNSVALKALID 306
Score = 56 (24.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 736 GRQNDPNRFQVVENAVGALRRFTAPTNLEWQKR--AAEAGVIPKLVQLLEYGTTLTKEHA 793
G + D N ++ EN V AL F T E K A VIP L + ++ G+ +T+ +A
Sbjct: 223 GDEVDSNP-ELQENIVTAL--FNMST-FEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNA 278
Query: 794 ATSLARFS 801
+LA S
Sbjct: 279 TLTLASLS 286
Score = 52 (23.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 33/143 (23%), Positives = 62/143 (43%)
Query: 375 LANGDDAVESIVRSLGR-RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSD 433
LA + + +S+ + + R+ A L LS ++ + IG+ L+ + D
Sbjct: 253 LAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGELD 312
Query: 434 DNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLS-AGPESVKMR--MATTLAEME 490
D A+ DA L + D + N+ K + L+ A +++K R + +LA +
Sbjct: 313 DLSATHDA--LCAVIDLCCDE-----RENWKKAISLGLAPAAIKNIKARRNLFESLAALA 365
Query: 491 LTDHHKASLLEGNVLGPLLHLVS 513
L H+ + E LG + L+S
Sbjct: 366 LISPHERVIQEVANLGVIYDLLS 388
Score = 41 (19.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 47/227 (20%), Positives = 86/227 (37%)
Query: 400 VALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMA 459
V L +ST + + + I LL R+A L +LS D N + +
Sbjct: 237 VTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIG 296
Query: 460 KANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQM 519
+ K L+ L + + A ++L + + + LG L + +I+
Sbjct: 297 NSVALKALID-LIGELDDLSATHDALCAVIDLCCDERENWKKAISLG--LAPAAIKNIKA 353
Query: 520 KKVAVKALRNLSSVPQNGLQMIKEGA-VGPLVDXXXXXXXXXXXXREETATAIMHLAVST 578
++ ++L L+ + + ++I+E A +G + D E A I V
Sbjct: 354 RRNLFESLAALALISPHE-RVIQEVANLGVIYDLLSILRKTSCMVTCENAVVI----VGN 408
Query: 579 MYQESSQTPVT-LLESDKEIFMLFSLINLTGPNVQ----QRILQTFN 620
MY +S + + +L ++ F+ I G V Q ILQ N
Sbjct: 409 MYAKSRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGILQCIN 455
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 154 (59.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 252 RKSLGSQPLEPLQS-FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVL 310
+K + L+ + S F CPI+ + M DPV +GQT+ER I KWF+ G+ CP TM L
Sbjct: 53 KKMIKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQEL 112
Query: 311 DTSILRPNKTLRQSIEEW 328
+ PNKTL I W
Sbjct: 113 WDDTVTPNKTLHHLIYTW 130
Score = 66 (28.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/154 (20%), Positives = 70/154 (45%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDD-GDEA-IIREHVGQKCLETLVT 689
K+ L Q + + ++V + + + N +L LV++ G A ++ H L L+
Sbjct: 224 KSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSH---SLLVGLMR 280
Query: 690 IIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVEN 749
+++ + ++ A+ +L + Q ++ GA+P +++ L + DP ++
Sbjct: 281 LVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPS---LDPECLELALF 337
Query: 750 AVGALRRFTAPTNLEWQKRAAE-AGVIPKLVQLL 782
+ AL T++E + + A IP V++L
Sbjct: 338 VLDALC-----TDVEGRVAVKDSANTIPYTVRVL 366
Score = 46 (21.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 449 SFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGN-VLGP 507
S S ++Q AK + ++ L+ G K+ A + + +A L+ + +L
Sbjct: 221 SDSKSGLMQPAKVSL---IVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVG 277
Query: 508 LLHLVS-RGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
L+ LV + A++ L+ +S Q M+ GAV LVD
Sbjct: 278 LMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVD 322
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 173 (66.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKW-FSDGNNLCPLTMTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV S+G T++R +IEKW F+ N CP+T + + L PN TLR+
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRL 75
Query: 325 IEEWKDRNTMI---TIASMKPKLVSTEVEEVL------H-----CLEQLQDLCQQRDQHR 370
I+ W N I + +P + +E+E+++ H CL++L+ + + ++
Sbjct: 76 IQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVSENATNK 135
Query: 371 EWERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTL 412
A + + +IV + A+ LL L T T+
Sbjct: 136 RCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETV 177
Score = 44 (20.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 768 RAAEAGVIPKLVQLLEYGTTLTKEHAATSLA 798
+A EAGVI +++LL + T E +A
Sbjct: 268 KAVEAGVISVIIELL-MDESFTSERRGPEMA 297
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 113 (44.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 60/296 (20%), Positives = 125/296 (42%)
Query: 383 ESIVRSL-GRRIEERKLAVALLLELS-TCNTLRDQIGDVQGCILLLVTMASSDDNQASRD 440
E I L G I + + + LL +++ + LR + + L ++ S N +
Sbjct: 237 EEIFNKLRGTDIFDHEQGLILLRKMTRSSEDLRVSLC-TDRILSFLRSLLVSRYNLVQTN 295
Query: 441 AQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLL 500
A + NLS N V++ ++ + L+ L +G + +A L + L D +K +
Sbjct: 296 AAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIG 355
Query: 501 EGNVLGPLLHLVSRGDIQM-KKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXX 559
+ PLLH + + + ++ A AL +LS +P N ++++ GAV L+
Sbjct: 356 VLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSG--- 412
Query: 560 XXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPN---VQQRIL 616
+ T+ ++ L + +L+ + ++ L + G + ++ +
Sbjct: 413 -----DSTSRILLVLCNLAACPDGKGA---MLDGNAVAILVGKLREVGGGDSEAARENCV 464
Query: 617 QTFNALCRSPSAGNIKTT--LTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDG 670
LC+ GN++ ++ A VL+++ E+ NE V+ A K+ + G
Sbjct: 465 AVLLTLCQ----GNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAMRGGG 516
Score = 111 (44.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPIT +M DPV SSGQTFER +++ + G L T D S + PN ++ +I
Sbjct: 35 FLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMKSTI 94
Query: 326 EEWKDR 331
W DR
Sbjct: 95 FSWCDR 100
Score = 83 (34.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 642 PVLVQLCEHDNENVRANA-VKLF-CCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEE 699
P+L L ++E R +A + L+ L+ ++R G + TL+++++S +
Sbjct: 362 PLLHALRSSESERARQDAALALYHLSLIPSNRTRLVR--AG--AVPTLLSMVRSGDSTSR 417
Query: 700 IASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTA 759
I + +L L P +LD A+ I++ L+ D + EN V L
Sbjct: 418 I---LLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAAR--ENCVAVLLTL-C 471
Query: 760 PTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSL 797
NL ++ A+EAG L+++ E G KE A+ L
Sbjct: 472 QGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 77 (32.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/106 (23%), Positives = 53/106 (50%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRAN-AVKLFCCLVDDGDEAIIREHVGQKCLETLVTI 690
K + + +P+L+ + + + + A LF ++D ++ +I +G +E L+
Sbjct: 310 KVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGV-LG--AVEPLLHA 366
Query: 691 IQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNG 736
++SS +E A L L +P L+ AGA+P +L+ +++G
Sbjct: 367 LRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSG 412
Score = 74 (31.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 56/240 (23%), Positives = 98/240 (40%)
Query: 496 KASLLEGNVLGPLLHL-VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXX 554
+ SL +L L L VSR ++ A + NLS QN +++++ G V L+D
Sbjct: 269 RVSLCTDRILSFLRSLLVSRYNLVQTNAAASVV-NLSLEKQNKVKIVRSGFVPLLIDVLK 327
Query: 555 XXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQR 614
+E A A+ LA+ ++ ++ + +L + + + L +L + +Q
Sbjct: 328 SGTTEA---QEHVAGALFSLAL----EDENKMVIGVLGAVEPL--LHALRSSESERARQD 378
Query: 615 ILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAV--KLFCC------L 666
L PS N +T L + A+P L+ + + R V L C +
Sbjct: 379 AALALYHLSLIPS--N-RTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAACPDGKGAM 435
Query: 667 VDDGDEAII----REHVG-------QKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQ 715
+D AI+ RE G + C+ L+T+ Q + +AS G L EV +
Sbjct: 436 LDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEE 495
Score = 64 (27.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 729 VLNFLKNGRQNDPNRFQVVE-NAVGALRRFTAPTNLEWQKRA--AEAGVIPKLVQLLEYG 785
+L+FL R +R+ +V+ NA ++ + LE Q + +G +P L+ +L+ G
Sbjct: 277 ILSFL---RSLLVSRYNLVQTNAAASVVNLS----LEKQNKVKIVRSGFVPLLIDVLKSG 329
Query: 786 TTLTKEHAATSL 797
TT +EH A +L
Sbjct: 330 TTEAQEHVAGAL 341
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 162 (62.1 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 262 PLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILR-PNKT 320
P Q F CPI+ ++M DPV +SG T++R IEKWF G CP+T TVL TS+ + PN T
Sbjct: 34 PSQ-FQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVL-TSLEQIPNHT 91
Query: 321 LRQSIEEW 328
+R+ I+ W
Sbjct: 92 IRRMIQGW 99
Score = 54 (24.1 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 42/174 (24%), Positives = 67/174 (38%)
Query: 742 NRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTT----LTKEHA---A 794
N ++E V L + P LE Q + +LV+LL G L KE
Sbjct: 184 NASLLLEETVSVLT-WMLPIGLEGQSKLTTTSSFNRLVELLRNGDQNAAFLIKELLELNV 242
Query: 795 TSLARFSKNSLGLSRPIPK--RKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPL 852
T + +K + G+ K + C + I H L E+ LE + V
Sbjct: 243 THVHALTKIN-GVQEAFMKSINRDSTCVNSLISIH---HMILTNQETVSRFLELDLVNIT 298
Query: 853 VRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPK 906
V +L D ++ CE +L L + E + + KV + I +V+ + S K
Sbjct: 299 VEMLVDSENSVCEKALTVLNVICETK--EGREKVRRNKLVIPILVKKILKISEK 350
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 723 AGALPIVLNFLKNGRQNDPNRFQVVENAVG 752
A + +V + G++++ NR V EN G
Sbjct: 140 AACMEMVTKMTRLGKESERNRKCVKENGAG 169
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 121 (47.7 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 258 QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT---MTVLDTSI 314
Q +P F CPI++ VM DPV SSGQTFER ++ D N + L ++ D S
Sbjct: 29 QEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVC-RDLNFIPKLNDDEESLPDFSN 87
Query: 315 LRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVL 353
+ PN ++ +I+ W D + ++ +P ST VE +L
Sbjct: 88 IIPNLNMKSTIDTWCDT---VGVSRPQPPDYST-VERIL 122
Score = 85 (35.0 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 425 LLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMAT 484
LL M S + +A L NLS N + + + + L+ L +G + A
Sbjct: 270 LLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHAAG 329
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDI-QMKKVAVKALRNLSSVPQNGLQMIKE 543
T+ + L D +K + L PLLH + + + + + AL +L+ N ++++
Sbjct: 330 TIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRL 389
Query: 544 GAVGPL 549
GAV L
Sbjct: 390 GAVPAL 395
Score = 85 (35.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 399 AVALLLELSTCNTLRDQIGDVQ-GCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ 457
A+A L+ LS ++++ V+ G + +L+ + S +A A + +LS DDN +
Sbjct: 286 ALASLVNLSLDK--KNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMP 343
Query: 458 MAKANYFKHLLQRLSAGPESVKMRMATTLAEMELT--DHHKASLLEGNVLGPLLHLVSRG 515
+ + LL L A ES + R + LA LT +++ L+ + L +V G
Sbjct: 344 IGVLGALQPLLHALRAA-ESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSG 402
Query: 516 DIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
+ + + V + NL+ + M+ AV LV
Sbjct: 403 ESASRALLV--ICNLACCSEGRSAMLDANAVAILV 435
Score = 70 (29.7 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 31/168 (18%), Positives = 76/168 (45%)
Query: 478 VKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNG 537
V+ +L + L +K +++ + L+ ++ G + ++ A + +LS N
Sbjct: 282 VQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNK 341
Query: 538 LQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEI 597
+ + GA+ PL+ R ++A A+ HL ++ +++++ + L + +
Sbjct: 342 MPIGVLGALQPLLHALRAAESDRT--RHDSALALYHLTLN----QTNRSKLVRLGA---V 392
Query: 598 FMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLV 645
LFS++ +G + + +L N C S ++ + +A+ +LV
Sbjct: 393 PALFSMVR-SGESASRALLVICNLACCSEG----RSAMLDANAVAILV 435
Score = 59 (25.8 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 698 EEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQ----VVENAVGA 753
E + A+ ++ L + +LDA A+ I++ L+ +P + EN V A
Sbjct: 403 ESASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAA 462
Query: 754 LRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHA 793
L + + L ++ A EA + L ++ E GT +E A
Sbjct: 463 LFALSHES-LRFKGLAKEARAVEVLKEVEERGTERAREKA 501
Score = 59 (25.8 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 727 PIVLNFLKNGRQNDPNRFQVVE-NAVGALRRFTAPTNLEWQKR----AAEAGVIPKLVQL 781
P +L+ LKN +R+ +V+ NA+ +L NL K+ G +P L+ +
Sbjct: 265 PRILSLLKN---MIVSRYSLVQTNALASL------VNLSLDKKNKLTIVRLGFVPILIDV 315
Query: 782 LEYGTTLTKEHAATSLARFS 801
L+ G+ +EHAA ++ S
Sbjct: 316 LKSGSREAQEHAAGTIFSLS 335
Score = 58 (25.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 54/255 (21%), Positives = 104/255 (40%)
Query: 493 DHHKASLLEGNVLGPLLHL-VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
D + SL +L L ++ VSR + ++ A+ +L NLS +N L +++ G V L+D
Sbjct: 256 DEARVSLCSPRILSLLKNMIVSRYSL-VQTNALASLVNLSLDKKNKLTIVRLGFVPILID 314
Query: 552 XXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNV 611
+E A I L++ ++ ++ P+ +L + + + L +L
Sbjct: 315 VLKSGSREA---QEHAAGTIFSLSL----EDDNKMPIGVLGALQPL--LHALRAAESDRT 365
Query: 612 QQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAV--KLFCC---- 665
+ L + + N ++ L + A+P L + RA V L CC
Sbjct: 366 RHDSALALYHLTLNQT--N-RSKLVRLGAVPALFSMVRSGESASRALLVICNLACCSEGR 422
Query: 666 --LVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDA 723
++D AI+ + ++ E SS E +A+ LS E +F +A
Sbjct: 423 SAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSH--ESLRFKGLAKEA 480
Query: 724 GALPIVLNFLKNGRQ 738
A+ ++ + G +
Sbjct: 481 RAVEVLKEVEERGTE 495
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 35/144 (24%), Positives = 62/144 (43%)
Query: 835 CGIESSFCLLEANAVRPLVRVL-----EDPDHGACEASLD----ALVTLIEGERLQNGSK 885
C E +L+ANAV LV L E+P +S A + + E L+
Sbjct: 417 CCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKG- 475
Query: 886 VLEDANAIDRMVRFLSSPSPKLQEKALDSVERIF-RLPEFKQKYGKSAQMPLVDLTQRGN 944
+ ++A A++ + + + +EKA ++ + R+PE ++ G+ + D N
Sbjct: 476 LAKEARAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDEEDGEGSID--WDRVIDSN 533
Query: 945 SSMKSLSARVLAHLNVLQDQSSYF 968
S++S RV V+ SS F
Sbjct: 534 GSIRS-RFRVGGRNRVVTQNSSGF 556
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 169 (64.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 49/165 (29%), Positives = 77/165 (46%)
Query: 165 VESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFK-SEIENSRMRKDQAEAV 223
+E+ Q RN D + D V + L D FK + I+ + E++
Sbjct: 312 LETPCQARNTDDQVKQFIEDWSEDDVSMWLCAQGLNDLVDIFKINNIDGRELFNLTKESL 371
Query: 224 QMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSS 283
+D + +E S K + +K K+L S P F CPITR++M DPV S
Sbjct: 372 -VDDL--KIESLGLRSKVLRKIEELRTKVKALSSGI--P-DEFLCPITRELMKDPVIASD 425
Query: 284 GQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEW 328
G ++E+ A+E W S P+T +L + +L PN+TL+ +I W
Sbjct: 426 GYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTLKMAISRW 470
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 118 (46.6 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 32/80 (40%), Positives = 42/80 (52%)
Query: 257 SQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIE--KWFSDGNNLCPLTMTVLDTSI 314
+ P E F CPIT +M DPV +SGQTFER +++ + S L T L T I
Sbjct: 5 NSPGETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVI 64
Query: 315 LRPNKTLRQSIEEWKDRNTM 334
PN ++ +I W DRN M
Sbjct: 65 --PNLAMKSTILSWCDRNKM 82
Score = 100 (40.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 30/127 (23%), Positives = 62/127 (48%)
Query: 425 LLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMAT 484
LL ++ S N +A + NLS N +++ ++ + L+ L +G + +
Sbjct: 229 LLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIG 288
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQM-KKVAVKALRNLSSVPQNGLQMIKE 543
L + + + +K + + PLLH + + + ++ A AL +LS +P N +++K
Sbjct: 289 ALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKA 348
Query: 544 GAVGPLV 550
GAV P++
Sbjct: 349 GAV-PMM 354
Score = 89 (36.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 37/159 (23%), Positives = 77/159 (48%)
Query: 583 SSQTPVTLLESDKEIFMLFSLI----NLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQC 638
S++T L +D+ + +L SLI N+ N I+ N P+ K + +
Sbjct: 213 SNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIV---NLSLEKPN----KLKIVRS 265
Query: 639 SAIPVLVQLCEHDNENVRANAV-KLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNE 697
+P+L+ + + + + + + LF V++ ++ +I +G +E L+ ++SS +E
Sbjct: 266 GFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGV-LG--AVEPLLHALRSSESE 322
Query: 698 EEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNG 736
A L L +P L+ AGA+P++L+ +++G
Sbjct: 323 RARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSG 361
Score = 82 (33.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 394 EERKLAVALLLELSTCNTLRDQIGDVQGCIL-LLVTMASSDDNQASRDAQELLENLSFSD 452
E ++ + L L+ + IG V G + LL + SS+ +A +DA L +LS
Sbjct: 281 EAQEHVIGALFSLAVEEENKMVIG-VLGAVEPLLHALRSSESERARQDAALALYHLSLIP 339
Query: 453 DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLL 509
+N ++ KA +L + +G ES R+ L + K ++L+GN + L+
Sbjct: 340 NNRSRLVKAGAVPMMLSMIRSG-ESAS-RILLLLCNLAACSEGKGAMLDGNAVSILV 394
Score = 76 (31.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 58/244 (23%), Positives = 103/244 (42%)
Query: 682 KCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDP 741
+ L L ++I S +N + +A I++ E P + ++ +G +P++++ LK+G
Sbjct: 225 RILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLK-IVRSGFVPLLIDVLKSGST--- 280
Query: 742 NRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTT-LTKEHAATSLARF 800
+ E+ +GAL F+ E + G + L+ L + ++ AA +L
Sbjct: 281 ---EAQEHVIGAL--FSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHL 335
Query: 801 SKNSLGLSRPIPKRKGFWCFSP--PPEIGCQVHGGLCGI----ESSFCLLEANAVRPLVR 854
S SR + S E ++ LC + E +L+ NAV LV
Sbjct: 336 SLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCNLAACSEGKGAMLDGNAVSILVG 395
Query: 855 VLEDP-----DHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSP--KL 907
L + D A E + AL+TL G G + +A A + + + S S +L
Sbjct: 396 KLRESGGAESDAAARENCVGALLTLSVGNMRFRG--LASEAGAEEILTEIVESESGSGRL 453
Query: 908 QEKA 911
+EKA
Sbjct: 454 KEKA 457
Score = 61 (26.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 39/171 (22%), Positives = 72/171 (42%)
Query: 496 KASLLEGNVLGPLLHL-VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXX 554
+ SL +L L L VSR +I A + NLS N L++++ G V L+D
Sbjct: 218 RISLCTDRILSLLRSLIVSRYNIVQTNAAASIV-NLSLEKPNKLKIVRSGFVPLLIDVLK 276
Query: 555 XXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQR 614
+E A+ LAV +E ++ + +L + + + L +L + +Q
Sbjct: 277 SGSTEA---QEHVIGALFSLAV----EEENKMVIGVLGAVEPL--LHALRSSESERARQD 327
Query: 615 ILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCC 665
L P N ++ L + A+P+++ + E+ A+ + L C
Sbjct: 328 AALALYHLSLIP---NNRSRLVKAGAVPMMLSMIR-SGES--ASRILLLLC 372
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 164 (62.8 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 196 RSALKKEFDEFKSEIENSRMRKDQAEAVQMDQI-IALLERA-DAASSPREKEMKYFSKRK 253
R ++ E + K+EIE+ M++ Q E + LLE+ D A E+ ++ K +
Sbjct: 224 RREVEAELNRAKAEIED--MKRVQIELKEQHYADCRLLEKERDEAIKTTEELLRALEKGE 281
Query: 254 SL----GSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
S S +EP Q F CPI++D+M +P + G T+E +W + G P+T
Sbjct: 282 SSIPLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLR 341
Query: 310 LDTSILRPNKTLRQSIEEW 328
L+ L PN LR +I++W
Sbjct: 342 LENRNLIPNLVLRSAIKDW 360
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 68/277 (24%), Positives = 120/277 (43%)
Query: 377 NGDDAVESIVRSL--GRRIEERKLAVALLLELSTCNTLRDQIGDVQ-GCILLLVTMASSD 433
N DD + +++ L IEE+K A A+ + L + N ++I + G I LV++ SS
Sbjct: 57 NSDDVIRNLITHLESSSSIEEQKQA-AMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSS 115
Query: 434 DNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTD 493
D Q + NLS D+N + + K L+ L G + K A L + +
Sbjct: 116 DLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVE 175
Query: 494 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXX 553
+K ++ + L++L+ G + KK A AL +L S +N + ++ G + PLV+
Sbjct: 176 ENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELM 235
Query: 554 XXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQ 613
+ + +M+L +S ES P + E + L ++ G Q+
Sbjct: 236 IDFESDMV----DKSAFVMNLLMSA--PESK--PAVVEEGGVPV--LVEIVE-AGTQRQK 284
Query: 614 RI-LQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCE 649
I + LC +T + + A+P LV L +
Sbjct: 285 EISVSILLQLCEESVV--YRTMVAREGAVPPLVALSQ 319
Score = 137 (53.3 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 61/277 (22%), Positives = 119/277 (42%)
Query: 508 LLHLVSRGDIQMKKVAVKALRNLS-SVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREE 566
+ HL S I+ +K A +R LS + P+N +++ K GA+ PLV +E
Sbjct: 66 ITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQL---QEY 122
Query: 567 TATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP 626
TA+++L++ +E ++ S + L + + L P ++ AL R
Sbjct: 123 GVTAVLNLSLCDENKE-------MIVSSGAVKPLVNALRLGTPTTKENAAC---ALLRLS 172
Query: 627 SAGNIKTTLTQCSAIPVLVQLCEHDNENVRANA-VKLFC-CLVDDGDEAIIREHVGQKCL 684
K T+ + AIP+LV L E+ + +A L+ C ++ + + + +
Sbjct: 173 QVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLV 232
Query: 685 ETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRF 744
E ++ S ++ A M +L PE +++ G +P+++ ++ G Q
Sbjct: 233 ELMIDF--ESDMVDKSAFVMNLLMSAPESKPA---VVEEGGVPVLVEIVEAGTQRQK--- 284
Query: 745 QVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQL 781
E +V L + ++ ++ A G +P LV L
Sbjct: 285 ---EISVSILLQL-CEESVVYRTMVAREGAVPPLVAL 317
Score = 119 (46.9 bits), Expect = 0.00083, P = 0.00083
Identities = 44/206 (21%), Positives = 90/206 (43%)
Query: 346 STEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLE 405
S+ +EE +++ L + + ++R A + S++ S +++E V +L
Sbjct: 72 SSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQE--YGVTAVLN 129
Query: 406 LSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFK 465
LS C+ ++ I G + LV +A L LS ++N + + ++
Sbjct: 130 LSLCDENKEMIVS-SGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIP 188
Query: 466 HLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVK 525
L+ L G K +T L + T+ +K +E ++ PL+ L+ + M +
Sbjct: 189 LLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAF 248
Query: 526 ALRNLSSVPQNGLQMIKEGAVGPLVD 551
+ L S P++ +++EG V LV+
Sbjct: 249 VMNLLMSAPESKPAVVEEGGVPVLVE 274
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
+K K+L S+ P F CPITR++M DP+ S G ++E+ A+E W S P+T V
Sbjct: 394 TKVKTLSSEI--P-DEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLV 450
Query: 310 LDTSILRPNKTLRQSIEEW 328
L + IL PN+TL+ +I+ W
Sbjct: 451 LSSVILTPNRTLKMAIDRW 469
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
+K KSL S P F CPITR++M DPV S G ++E+ A+E W S P+T V
Sbjct: 395 TKVKSLSSGI--P-DEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLV 451
Query: 310 LDTSILRPNKTLRQSIEEW 328
L +++L PN+TL+ +I W
Sbjct: 452 LPSAVLTPNRTLKMAINRW 470
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
+K K+L S+ P F CPITR++M DP+ S G ++E+ A+E W S P+T V
Sbjct: 395 TKVKTLSSEI--P-DEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLV 451
Query: 310 LDTSILRPNKTLRQSIEEW 328
L + IL PN+TL+ +I+ W
Sbjct: 452 LSSVILTPNRTLKMAIDRW 470
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 163 (62.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 89/374 (23%), Positives = 162/374 (43%)
Query: 357 EQLQDLCQQRDQHREWERLANGD-DAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQ 415
E + L Q + + + +NG A+ ++V S I+ ++ A E+ T +R+
Sbjct: 28 EAISALLQYLENRSDVDFFSNGPLRALSTLVYS--ENIDLQRSAALAFAEI-TEKDVREV 84
Query: 416 IGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP 475
DV IL+L+ A D++ R A L NL+ + +N + + + + L++++ +
Sbjct: 85 NRDVLEPILILLQSA---DSEVQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTN 141
Query: 476 ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
V+ + + D +K+ + + L PL L DI++++ A AL N++ +
Sbjct: 142 IEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGE 201
Query: 536 NGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDK 595
N +++ GAV LV TA+ ++AV E ++ + E K
Sbjct: 202 NRQELVNAGAVPVLVSLLSNEDADVQYY---CTTALSNIAVD----EVNRKKLASTEP-K 253
Query: 596 EIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQL--CEHDNE 653
+ L L++ P VQ Q AL S + + + +P LVQL C H
Sbjct: 254 LVGQLVHLMDSPSPRVQ---CQATLALRNLASDSGYQVEIVRAGGLPHLVQLLTCNHQ-P 309
Query: 654 NVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEV 713
V A + + +EA+I E G L+ LV ++ + +EE A+ L L
Sbjct: 310 LVLAAVACIRNISIHPLNEALIIE-AG--FLKPLVGLLDYTDSEEIQCHAVSTLRNLAAS 366
Query: 714 PQFTQW-LLDAGAL 726
+ + LL AGA+
Sbjct: 367 SEKNRTALLAAGAV 380
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 99/457 (21%), Positives = 184/457 (40%)
Query: 476 ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
E++ ++ + LA E+T+ + +VL P+L L+ D ++++ A AL NL+ +
Sbjct: 61 ENIDLQRSAALAFAEITEKDVREV-NRDVLEPILILLQSADSEVQRAACGALGNLAVNTE 119
Query: 536 NGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDK 595
N + +++ G + PL+ + I +LA Q+ +++ +
Sbjct: 120 NKILIVEMGGLEPLI---RQMMSTNIEVQCNAVGCITNLAT----QDDNKSKIA---KSG 169
Query: 596 EIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENV 655
+ L L VQ+ AL +G + L A+PVLV L +++ +V
Sbjct: 170 ALIPLTKLAKSKDIRVQRNAT---GALLNMTHSGENRQELVNAGAVPVLVSLLSNEDADV 226
Query: 656 RANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVP 714
+ + VD+ + + K + LV ++ S + + + L L
Sbjct: 227 QYYCTTALSNIAVDEVNRKKLAS-TEPKLVGQLVHLMDSPSPRVQCQATLA-LRNLASDS 284
Query: 715 QFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTA-PTNLEWQKRAAEAG 773
+ ++ AG LP ++ L Q P +V AV +R + P N + EAG
Sbjct: 285 GYQVEIVRAGGLPHLVQLLTCNHQ--P----LVLAAVACIRNISIHPLN---EALIIEAG 335
Query: 774 VIPKLVQLLEYGTTLTKE-HAATSL----ARFSKNSLGL--SRPIPKRKGFWCFSPPPEI 826
+ LV LL+Y + + HA ++L A KN L + + K K P +
Sbjct: 336 FLKPLVGLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALLAAGAVDKCKEL-VLKVPLTV 394
Query: 827 GCQVHG--GLCGIESSFC--LLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQN 882
++ + + L E++ + L+ + + C S AL L R+ N
Sbjct: 395 QSEISACFAILALADDLKPKLYESHIIDVLIPLTFSENGEVCGNSAAALANLCS--RVSN 452
Query: 883 GSK--VLED-ANAIDR----MVRFLSSPSPKLQEKAL 912
K +L + A + ++RFL S SP + AL
Sbjct: 453 EHKQYILNNWAQPNEGIYGFLIRFLESGSPTFEHIAL 489
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 163 (62.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 89/374 (23%), Positives = 162/374 (43%)
Query: 357 EQLQDLCQQRDQHREWERLANGD-DAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQ 415
E + L Q + + + +NG A+ ++V S I+ ++ A E+ T +R+
Sbjct: 28 EAISALLQYLENRSDVDFFSNGPLRALSTLVYS--ENIDLQRSAALAFAEI-TEKDVREV 84
Query: 416 IGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP 475
DV IL+L+ A D++ R A L NL+ + +N + + + + L++++ +
Sbjct: 85 NRDVLEPILILLQSA---DSEVQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMSTN 141
Query: 476 ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
V+ + + D +K+ + + L PL L DI++++ A AL N++ +
Sbjct: 142 IEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGE 201
Query: 536 NGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDK 595
N +++ GAV LV TA+ ++AV E ++ + E K
Sbjct: 202 NRQELVNAGAVPVLVSLLSNEDADVQYY---CTTALSNIAVD----EVNRKKLASTEP-K 253
Query: 596 EIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQL--CEHDNE 653
+ L L++ P VQ Q AL S + + + +P LVQL C H
Sbjct: 254 LVGQLVHLMDSPSPRVQ---CQATLALRNLASDSGYQVEIVRAGGLPHLVQLLTCNHQ-P 309
Query: 654 NVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEV 713
V A + + +EA+I E G L+ LV ++ + +EE A+ L L
Sbjct: 310 LVLAAVACIRNISIHPLNEALIIE-AG--FLKPLVGLLDYTDSEEIQCHAVSTLRNLAAS 366
Query: 714 PQFTQW-LLDAGAL 726
+ + LL AGA+
Sbjct: 367 SEKNRTALLAAGAV 380
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 99/457 (21%), Positives = 184/457 (40%)
Query: 476 ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
E++ ++ + LA E+T+ + +VL P+L L+ D ++++ A AL NL+ +
Sbjct: 61 ENIDLQRSAALAFAEITEKDVREV-NRDVLEPILILLQSADSEVQRAACGALGNLAVNTE 119
Query: 536 NGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDK 595
N + +++ G + PL+ + I +LA Q+ +++ +
Sbjct: 120 NKILIVEMGGLEPLI---RQMMSTNIEVQCNAVGCITNLAT----QDDNKSKIA---KSG 169
Query: 596 EIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENV 655
+ L L VQ+ AL +G + L A+PVLV L +++ +V
Sbjct: 170 ALIPLTKLAKSKDIRVQRNAT---GALLNMTHSGENRQELVNAGAVPVLVSLLSNEDADV 226
Query: 656 RANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVP 714
+ + VD+ + + K + LV ++ S + + + L L
Sbjct: 227 QYYCTTALSNIAVDEVNRKKLAS-TEPKLVGQLVHLMDSPSPRVQCQATLA-LRNLASDS 284
Query: 715 QFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTA-PTNLEWQKRAAEAG 773
+ ++ AG LP ++ L Q P +V AV +R + P N + EAG
Sbjct: 285 GYQVEIVRAGGLPHLVQLLTCNHQ--P----LVLAAVACIRNISIHPLN---EALIIEAG 335
Query: 774 VIPKLVQLLEYGTTLTKE-HAATSL----ARFSKNSLGL--SRPIPKRKGFWCFSPPPEI 826
+ LV LL+Y + + HA ++L A KN L + + K K P +
Sbjct: 336 FLKPLVGLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALLAAGAVDKCKEL-VLKVPLTV 394
Query: 827 GCQVHG--GLCGIESSFC--LLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQN 882
++ + + L E++ + L+ + + C S AL L R+ N
Sbjct: 395 QSEISACFAILALADDLKPKLYESHIIDVLIPLTFSENGEVCGNSAAALANLCS--RVSN 452
Query: 883 GSK--VLED-ANAIDR----MVRFLSSPSPKLQEKAL 912
K +L + A + ++RFL S SP + AL
Sbjct: 453 EHKQYILNNWAQPNEGIYGFLIRFLESGSPTFEHIAL 489
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLD 311
R + S P+ F CPITR++M DPV + G ++E+ A+E W S+ P+T L
Sbjct: 394 RMKMVSVPVAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLP 453
Query: 312 TSILRPNKTLRQSIEEW 328
+ +L PN+TL+ +I W
Sbjct: 454 SLVLTPNRTLKMAISRW 470
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 74/272 (27%), Positives = 113/272 (41%)
Query: 386 VRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELL 445
+RS I+ A LL + + R IG+ G I L+ + +D A L
Sbjct: 192 LRSSSVAIKRSAAAKLRLLAKNRADN-RVLIGE-SGAIQALIPLLRCNDPWTQEHAVTAL 249
Query: 446 ENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVL 505
NLS D N +A K L+ L G E+ K A L + L + +K S+ +
Sbjct: 250 LNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAI 309
Query: 506 GPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXRE 565
PL+ L+ G + KK A+ L L ++ QN + + GAV PLVD E
Sbjct: 310 PPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMA---E 366
Query: 566 ETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRS 625
+ + LA +E+ ++E + I L I ++ + T LC S
Sbjct: 367 KAMVVLSSLAAIDDGKEA------IVE-EGGIAALVEAIEDGSVKGKEFAILTLLQLC-S 418
Query: 626 PSAGNIKTTLTQCSAIPVLVQLCEHDNENVRA 657
S N + L + AIP LV L + + +VRA
Sbjct: 419 DSVRN-RGLLVREGAIPPLVGLSQSGSVSVRA 449
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 158 (60.7 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 194 TERSALKK--EFDEFKSEIEN------SRMRKDQAEA-VQMDQIIALLERADAASSPREK 244
TE++ K+ E ++ +SE E + +RK Q + + M+ + E + +
Sbjct: 273 TEKALRKRNDELEKMRSESETQITESYTVIRKLQEKNNLSMETFRGIREEQEELKIKLRE 332
Query: 245 EMKYFSKRK---SLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNN 301
K KR+ + S EP Q F CPIT D+M DP + G T+E AI +WF G+
Sbjct: 333 VSKLKGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHE 392
Query: 302 LCPLTMTVLDTSILRPNKTLRQSIEEW 328
P+ L + L PN LR +I+EW
Sbjct: 393 TSPMINKRLPHTSLVPNLALRSAIQEW 419
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 168 (64.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLD 311
R SL + P +P F+CP+ +DVM +P + G T++R AIE+W + + P+T + L
Sbjct: 739 RNSLSAAPSQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-ENHRTSPVTNSPLQ 797
Query: 312 TSILRPNKTLRQSIEEWKDRN 332
L PN TL +I EW++RN
Sbjct: 798 NVNLLPNHTLYAAIVEWRNRN 818
Score = 44 (20.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 19 LSQIVEAILEVMIASNNVLIKKESFKELAA-YLERIVPVLKE 59
L I I + AS N++ E +E+AA Y ++++ KE
Sbjct: 65 LIHIHPKITTLPTASGNIVSISEELEEVAAAYRQKVMQETKE 106
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 203 FDEFKSEIEN--SR-MRKDQAEAVQMDQIIA--LLERADAASSPREKEMKYFSKRKSLGS 257
F EF + E S+ R+D+ E + + +LE + SP++ + K KS S
Sbjct: 172 FSEFSTSAEKPISKGRRRDEEEEPESPKEHPGWILEPEE---SPKKGRKETIEKSKSNES 228
Query: 258 QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRP 317
L+ F CPI+ ++M DP + G T+E KW G P T L+ L P
Sbjct: 229 DEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVP 288
Query: 318 NKTLRQSIEEWKDRN 332
N TLR I++W ++N
Sbjct: 289 NHTLRIIIKDWLEKN 303
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 195 ERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKS 254
E A +++ E E+ KD A +V +I+ LL+ + + R FS S
Sbjct: 440 EEEARRRKGTE--EELSKVAAEKDAASSV-CSEILLLLQ----SYTRRHGTPSGFSDEDS 492
Query: 255 LGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSI 314
+ QP P F CPI+++VM +P + G T+E ++ +W +G+ P+T L +
Sbjct: 493 VTRQP--P-SYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNN 549
Query: 315 LRPNKTLRQSIEEWKDRNT 333
L PN LR +I+EW RN+
Sbjct: 550 LVPNHALRSAIQEWLQRNS 568
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV S G ++ER A+E W P+T L + +L PN+TL+ +I
Sbjct: 406 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 465
Query: 326 EEW 328
W
Sbjct: 466 NRW 468
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV S G ++ER A+E W P+T L + +L PN+TL+ +I
Sbjct: 408 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 467
Query: 326 EEW 328
W
Sbjct: 468 NRW 470
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 245 EMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCP 304
E++ K S + E Q F CPI+ +VM DP + G T+E AI W G+ P
Sbjct: 308 EVEELRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSP 367
Query: 305 LTMTVLDTSILRPNKTLRQSIEEW 328
+T T L + L PN LR +I+EW
Sbjct: 368 MTNTKLHHTKLVPNLALRSAIQEW 391
>SGD|S000005133 [details] [associations]
symbol:SRP1 "Karyopherin alpha homolog" species:4932
"Saccharomyces cerevisiae" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016021
"integral to membrane" evidence=ISM] [GO:0006612 "protein targeting
to membrane" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006606 "protein import into nucleus"
evidence=IEA;IMP] [GO:0008565 "protein transporter activity"
evidence=IEA;IDA] [GO:0000176 "nuclear exosome (RNase complex)"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 SGD:S000005133
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0048471
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006612
GO:GO:0008565 EMBL:BK006947 eggNOG:COG5064 GO:GO:0006606 PDB:1WA5
PDBsum:1WA5 HOGENOM:HOG000167616 OMA:QPDWTTI
GeneTree:ENSGT00610000085856 OrthoDB:EOG408RH7 EMBL:M75849
EMBL:Z71465 PIR:S30884 RefSeq:NP_014210.1 PDB:1BK5 PDB:1BK6
PDB:1EE4 PDB:1EE5 PDB:1UN0 PDB:2C1T PDBsum:1BK5 PDBsum:1BK6
PDBsum:1EE4 PDBsum:1EE5 PDBsum:1UN0 PDBsum:2C1T
ProteinModelPortal:Q02821 SMR:Q02821 DIP:DIP-728N IntAct:Q02821
MINT:MINT-386354 STRING:Q02821 PaxDb:Q02821 PeptideAtlas:Q02821
EnsemblFungi:YNL189W GeneID:855532 KEGG:sce:YNL189W CYGD:YNL189w
EvolutionaryTrace:Q02821 NextBio:979583 Genevestigator:Q02821
GermOnline:YNL189W Uniprot:Q02821
Length = 542
Score = 113 (44.8 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 51/213 (23%), Positives = 93/213 (43%)
Query: 600 LFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANA 659
+ L N P++ + T + LCR + ++Q A+P L +L + +A
Sbjct: 220 ILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQ--ALPTLAKLIYSMDTETLVDA 277
Query: 660 VKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIAS-AMGILSKLPEVPQF-T 717
L DG + I+ + + + LV ++ SH + + A+ + + T
Sbjct: 278 CWAISYL-SDGPQEAIQAVIDVRIPKRLVELL--SHESTLVQTPALRAVGNIVTGNDLQT 334
Query: 718 QWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPK 777
Q +++AG LP + L + ++N + + A + TA N E + +A +IP
Sbjct: 335 QVVINAGVLPALRLLLSSPKEN------IKKEACWTISNITAG-NTEQIQAVIDANLIPP 387
Query: 778 LVQLLEYGTTLTKEHAATSLARFSKNSLGLSRP 810
LV+LLE TK+ A +++ S GL RP
Sbjct: 388 LVKLLEVAEYKTKKEACWAISNASSG--GLQRP 418
Score = 74 (31.1 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 832 GGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLI---EGERLQNGSKVLE 888
GGL + L+ ++PL +LE D+ E +LDAL ++ E ++ G + E
Sbjct: 413 GGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINE 472
Query: 889 DANAIDR---MVRFLS---SPSPKLQEKALDSVERIF 919
+A+ I++ M + + + + K+ EKA +E F
Sbjct: 473 NADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYF 509
Score = 55 (24.4 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 435 NQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDH 494
+Q ++ ++ + L+ SDD Q++ F+ +L R P V ++ +E
Sbjct: 83 SQLQQELPQMTQQLN-SDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRE 141
Query: 495 HKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAV 546
++ +L+ L ++ S G KV V A +VP +Q++ G+V
Sbjct: 142 NQPEMLQLEAAWALTNIAS-GTSAQTKVVVDA----DAVPLF-IQLLYTGSV 187
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 468 LQRLSAGPESVKMRMATTLAEM--ELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVK 525
+Q L G VK + L + + TD+ + +L+ N + P+L L + + + A
Sbjct: 179 IQLLYTGSVEVKEQAIWALGNVAGDSTDY-RDYVLQCNAMEPILGLFNSNKPSLIRTATW 237
Query: 526 ALRNL 530
L NL
Sbjct: 238 TLSNL 242
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 215 MRKDQAEAVQMDQIIALLERADAASS 240
MR++Q E +Q++ AL A S+
Sbjct: 139 MRENQPEMLQLEAAWALTNIASGTSA 164
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 197 SALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIA 230
S L++E + ++ + M++ + V+ QI++
Sbjct: 83 SQLQQELPQMTQQLNSDDMQEQLSATVKFRQILS 116
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 147 (56.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 65/255 (25%), Positives = 108/255 (42%)
Query: 392 RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS 451
RIE K LL + ++ R ++ D G I LV M S + A + L NL+
Sbjct: 62 RIEAAKEIRKLLRKSPVKSSARSKLADA-GVIPPLVPMLFSSNVDARHASLLALLNLAVR 120
Query: 452 DD-NVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLH 510
++ N +++ KA L+Q L S++ + + +KA ++ V L+
Sbjct: 121 NERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQ 180
Query: 511 LVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATA 570
++S G +Q K AV AL NLS+ + ++ AV PL+ E ATA
Sbjct: 181 MLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFA--EKATA 238
Query: 571 IMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGN 630
++ + +S + E + +T E I L + P + + +LCRS
Sbjct: 239 LVEMILS--HSEDGRNAITSCEDG--ILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKY 294
Query: 631 IKTTLTQCSAIPVLV 645
K L + AIP L+
Sbjct: 295 RKLILKE-GAIPGLL 308
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 69/304 (22%), Positives = 130/304 (42%)
Query: 426 LVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATT 485
++ + S D + R A L NL+ + DN V + L++++ + V+
Sbjct: 111 ILFLLQSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLIKQMMSPNVEVQCNAVGC 170
Query: 486 LAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGA 545
+ + + +KA + LGPL+ L D+++++ A AL N++ N Q++ GA
Sbjct: 171 ITNLATHEDNKAKIARSGALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNAGA 230
Query: 546 VGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQES-SQTPVTLLESDKEIFMLFSLI 604
+ LV TA+ ++AV ++ +QT L++S L L+
Sbjct: 231 IPVLVQLLSSSDVDVQYY---CTTALSNIAVDASNRKRLAQTESRLVQS------LVHLM 281
Query: 605 NLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFC 664
+ + P VQ Q AL S + + + +P L++L + + +AV
Sbjct: 282 DSSTPKVQ---CQAALALRNLASDEKYQLEIVRAKGLPPLLRLLQSSYLPLILSAVACIR 338
Query: 665 CL-VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWL-LD 722
+ + +E+ I + L+ LV ++ S+ NEE A+ L L + L L
Sbjct: 339 NISIHPLNESPI---IDAGFLKPLVDLLGSTDNEEIQCHAISTLRNLAASSDRNKELVLQ 395
Query: 723 AGAL 726
AGA+
Sbjct: 396 AGAV 399
Score = 140 (54.3 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 43/168 (25%), Positives = 84/168 (50%)
Query: 385 IVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQEL 444
I + + +E + AV + L+T + +I G + L+ +A S D + R+A
Sbjct: 153 IKQMMSPNVEVQCNAVGCITNLATHEDNKAKIAR-SGALGPLIRLAKSKDMRVQRNATGA 211
Query: 445 LENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEM--ELTDHHKASLLEG 502
L N++ SDDN Q+ A L+Q LS+ V+ T L+ + + ++ + + E
Sbjct: 212 LLNMTHSDDNRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDASNRKRLAQTES 271
Query: 503 NVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
++ L+HL+ +++ A ALRNL+S + L++++ + PL+
Sbjct: 272 RLVQSLVHLMDSSTPKVQCQAALALRNLASDEKYQLEIVRAKGLPPLL 319
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/284 (22%), Positives = 120/284 (42%)
Query: 429 MASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAE 488
+ S D + R A L NL+ + +N + K N L++++ + V+ +
Sbjct: 93 LLQSPDAEIQRAASVALGNLAVNAENKALVVKLNGLDLLIRQMMSPHVEVQCNAVGCITN 152
Query: 489 MELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGP 548
+ D +K+ + LGPL L DI++++ A AL N++ +N Q++ G +
Sbjct: 153 LATLDENKSKIAHSGALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIPV 212
Query: 549 LVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESD-KEIFMLFSLINLT 607
LV T+I ++AV ++++ L +S+ K + L L++ +
Sbjct: 213 LVSLLPSSDTDVQYY---CTTSISNIAVDAVHRKR------LAQSEPKLVRSLIQLMDTS 263
Query: 608 GPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDN-ENVRANAVKLFCCL 666
P VQ Q AL S + + Q +A+P L++L + A+ +
Sbjct: 264 SPKVQ---CQAALALRNLASDERYQIEIVQSNALPSLLRLLRSSYLPLILASVACIRNIS 320
Query: 667 VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKL 710
+ +E+ I + L LV ++ + NEE A+ L L
Sbjct: 321 IHPLNESPI---IDAGFLRPLVDLLSCTENEEIQCHAVSTLRNL 361
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 156 (60.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
+YCPI +++M DP + G T+ER AI++W ++ P+T L S L PN TLR +I
Sbjct: 712 YYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLRSAI 771
Query: 326 EEWKDRNTM 334
EW+ R+ +
Sbjct: 772 REWRSRSRL 780
Score = 42 (19.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 186 IADAVGISTERSALKKEFDEFKSEIE 211
+ DAVG + R AL+ + F +I+
Sbjct: 29 VGDAVGGTASRRALRWTIENFLPKID 54
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 156 (60.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 34/82 (41%), Positives = 47/82 (57%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
SK K GS P ++CPI R++M +P + G T+ER AI W + +N+ P+T
Sbjct: 714 SKVKKEGSNLRAP-SHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNISPVTRQK 771
Query: 310 LDTSILRPNKTLRQSIEEWKDR 331
LD L PN TLR +I +WK R
Sbjct: 772 LDHFKLTPNHTLRSAIRDWKSR 793
Score = 40 (19.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 14 PASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNS 73
P + S+ VE EV N + +K+ L +K L+ L+ S+ +N+
Sbjct: 300 PETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNESKRVNN 359
Query: 74 AIE 76
A+E
Sbjct: 360 AVE 362
>POMBASE|SPCC962.03c [details] [associations]
symbol:cut15 "karyopherin Cut15" species:4896
"Schizosaccharomyces pombe" [GO:0000087 "M phase of mitotic cell
cycle" evidence=IMP] [GO:0005525 "GTP binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=NAS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=IDA;IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=TAS] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=ISO] [GO:0030261 "chromosome condensation" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0033554
"cellular response to stress" evidence=IGI] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 PomBase:SPCC962.03c GO:GO:0005525
GO:GO:0007346 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0033554 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0008565 GO:GO:0005643 GO:GO:0030261
GO:GO:0006607 GO:GO:0000087 HOGENOM:HOG000167616 EMBL:AB010574
EMBL:AB027972 PIR:T41650 RefSeq:NP_587868.1
ProteinModelPortal:O14063 SMR:O14063 STRING:O14063
EnsemblFungi:SPCC962.03c.1 GeneID:2539426 KEGG:spo:SPCC962.03c
OMA:WRSERIV OrthoDB:EOG408RH7 NextBio:20800590 Uniprot:O14063
Length = 542
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 77/319 (24%), Positives = 134/319 (42%)
Query: 621 ALCRSPSAGNIKT-TLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHV 679
AL S + +T + + +A+PV V L ++VR AV + GD + R+HV
Sbjct: 144 ALTNVASGSSNQTHVVVEANAVPVFVSLLSSSEQDVREQAVWALGNIA--GDSPMCRDHV 201
Query: 680 GQKC--LETLVTIIQSSHNEEEIASAMGILSKL--PEVPQFTQWLLDAGALPIVLNFLKN 735
Q C LE L+ II+S+ + ++ LS + + PQ W + +P VL+ L
Sbjct: 202 LQ-CGVLEPLLNIIESNRRLSMLRNSTWTLSNMCRGKNPQ-PDWNSISQVIP-VLSKLIY 258
Query: 736 GRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAAT 795
D V+ +A+ A+ + N + Q +AG+ +LV+LL + + + A
Sbjct: 259 TLDED-----VLVDALWAISYLSDGANEKIQA-IIDAGIPRRLVELLMHPSAQVQTPALR 312
Query: 796 SLARFSKNSLGLSRPIPKRKGFWCF-----SPPPEI---GCQVHGGLCGIESSFC--LLE 845
S+ ++ I SP + C + SS ++E
Sbjct: 313 SVGNIVTGDDVQTQVIINCGALSALLSLLSSPRDGVRKEACWTISNITAGNSSQIQYVIE 372
Query: 846 ANAVRPLVRVLEDPDHGACEASLDALVTLIEG-ERLQNGSKVLEDANAIDRMVRFLSSPS 904
AN + PL+ +L D + + A+ G R + + L + AI + L+
Sbjct: 373 ANIIPPLIHLLTTADFKIQKEACWAISNATSGGARRPDQIRYLVEQGAIKPLCNLLACQD 432
Query: 905 PKLQEKALDSVERIFRLPE 923
K+ + ALD +E I R+ E
Sbjct: 433 NKIIQVALDGIENILRVGE 451
Score = 111 (44.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 42/198 (21%), Positives = 87/198 (43%)
Query: 359 LQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKL-AVALLLELSTCNTLRDQIG 417
L ++C+ ++ +W ++ + ++ +L + L A++ L + N I
Sbjct: 230 LSNMCRGKNPQPDWNSISQVIPVLSKLIYTLDEDVLVDALWAISYLSD--GANEKIQAII 287
Query: 418 DVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMA-KANYFKHLLQRLSAGPE 476
D G LV + Q A + N+ DD Q+ LL LS+ +
Sbjct: 288 DA-GIPRRLVELLMHPSAQVQTPALRSVGNIVTGDDVQTQVIINCGALSALLSLLSSPRD 346
Query: 477 SVKMRMATTLAEMELTDHHKAS-LLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSV-- 533
V+ T++ + + + ++E N++ PL+HL++ D +++K A A+ N +S
Sbjct: 347 GVRKEACWTISNITAGNSSQIQYVIEANIIPPLIHLLTTADFKIQKEACWAISNATSGGA 406
Query: 534 --PQNGLQMIKEGAVGPL 549
P ++++GA+ PL
Sbjct: 407 RRPDQIRYLVEQGAIKPL 424
Score = 82 (33.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 23/86 (26%), Positives = 45/86 (52%)
Query: 843 LLEANAVRPLVRVLEDPDHGACEASLDALVTLIE-GE--RLQNGSKV------LEDANAI 893
L+E A++PL +L D+ + +LD + ++ GE R N K+ +EDA +
Sbjct: 415 LVEQGAIKPLCNLLACQDNKIIQVALDGIENILRVGELDRANNPDKINLYAVYVEDAGGM 474
Query: 894 DRMVRFLSSPSPKLQEKALDSVERIF 919
D + +S + ++ +KA + +E+ F
Sbjct: 475 DLIHECQNSSNSEIYQKAYNIIEKFF 500
>TAIR|locus:2087565 [details] [associations]
symbol:AT3G20170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000357 InterPro:IPR016024 Pfam:PF02985 PROSITE:PS50176
SMART:SM00185 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:AP000383 EMBL:BT030397
IPI:IPI00525028 RefSeq:NP_188652.1 UniGene:At.50207
ProteinModelPortal:Q9LJY1 SMR:Q9LJY1 PaxDb:Q9LJY1 PRIDE:Q9LJY1
ProMEX:Q9LJY1 EnsemblPlants:AT3G20170.1 GeneID:821561
KEGG:ath:AT3G20170 TAIR:At3g20170 eggNOG:NOG301725
HOGENOM:HOG000153032 InParanoid:Q9LJY1 OMA:KCLWSLV PhylomeDB:Q9LJY1
ProtClustDB:CLSN2684731 Genevestigator:Q9LJY1 Uniprot:Q9LJY1
Length = 475
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 92/357 (25%), Positives = 145/357 (40%)
Query: 623 CRSPSAGNIKTTLTQCSAIPVLVQLCEHDNE--NV-RANAVKLFCCLVDDGDEAIIREHV 679
C +G T+ +C I L+ L N NV R VK LV G IR V
Sbjct: 91 CGGEESG-FAVTMGRCGVIASLLGLLLEANTDGNVFRRIWVKCLWSLVTFGSS--IR--V 145
Query: 680 GQKCLETLVTIIQSSHNEEEIASA---MGILSKLPEVPQFTQWLLDAGALPIVLNFLKNG 736
G L L +I+ +N E+ S + ILS L + + + L+ +G L ++ K G
Sbjct: 146 GLARLGGLEIVIRELNNWEDDGSRWYLLEILSALTTIRESRRVLVHSGGLKFLVEAAKVG 205
Query: 737 RQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATS 796
R +G RR ++ EAGVIP LV L G K A +
Sbjct: 206 NLASRERACHAIGLIGVTRRA--------RRILVEAGVIPALVDLYRDGDDKAKLLAGNA 257
Query: 797 LARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLL---EANAV---R 850
L S + + RP+ + + + Q G E FC+L E NAV
Sbjct: 258 LGIISAQTEYI-RPVTEAGSIPLYVEL--LSGQDPMGKDIAEDVFCILAVAEGNAVLIAE 314
Query: 851 PLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEK 910
LVR+L D+ A A+ D L L G R + V+ + AI ++ L S + +E+
Sbjct: 315 QLVRILRAGDNEAKLAASDVLWDLA-GYR--HSVSVIRGSGAIPLLIELLRDGSLEFRER 371
Query: 911 ALDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSY 967
++ ++ ++ + S +P++ + G+ S + A +N +DQ Y
Sbjct: 372 ISGAISQLSYNENDREAFSDSGMIPIL-IEWLGDESEELRDNAAEALINFSEDQEHY 427
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 144 (55.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
FYCPIT+DVM +P S G T+E+ AI++W N+ P+T + L PN +L +I
Sbjct: 729 FYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLLSAI 787
Query: 326 EEWKDR 331
+EW+ +
Sbjct: 788 KEWRSQ 793
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 60/291 (20%), Positives = 127/291 (43%)
Query: 426 LVTMASSDDNQASRDAQEL-LENLSFSDD-NVVQMAKANYFKHLLQRLSAGPESVKMRMA 483
LV+M D ++ +A L L NL+ D+ N V + +A + ++ L + +++ +
Sbjct: 109 LVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYAS 168
Query: 484 TTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKE 543
+L + + ++K + V+ L+ ++ G Q K AV AL NLS++P N ++
Sbjct: 169 ASLLTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILAT 228
Query: 544 GAVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSL 603
+ P+++ E+ + I L VS E ++T L+ + + + +
Sbjct: 229 KPLSPILNLLKSSKKSSKTS-EKCCSLIEALMVSG---EEARTG--LVSDEGGVLAVVEV 282
Query: 604 INLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLF 663
+ ++ + LC+S + + L + IP L++L R A +L
Sbjct: 283 LENGSLQAREHAVGVLLTLCQSDRSKYREPILRE-GVIPGLLELTVQGTSKSRIKAQRLL 341
Query: 664 CCLVDDGDEAIIREHVGQKCLETLVT-IIQSSHNEEEIASAMGILSKLPEV 713
C L + R V +E +V+ +I +++ A +L+++ +V
Sbjct: 342 CLLRNSESP---RSEVQPDTIENIVSSLISHIDGDDQSGKAKKMLAEMVQV 389
>TAIR|locus:2204700 [details] [associations]
symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
Length = 2136
Score = 118 (46.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 122/572 (21%), Positives = 213/572 (37%)
Query: 261 EPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRP--- 317
EP+ + +M+ SS F+ S IE L P ++ IL
Sbjct: 357 EPIGDVIGALAYALMIFKQPESSENIFDPSVIESILV--KLLKPRDTKLIQERILEAMAS 414
Query: 318 ---NKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEE-VLHCLEQLQDLCQQRDQHREWE 373
N +L +++ + + +I + +M S +V E ++ CL LC D+ WE
Sbjct: 415 LYGNSSLSCYLDDAEAKRVLIALITM----ASADVRERLIICLS---GLCH--DKVGIWE 465
Query: 374 RLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIG-DVQGCILLLVTMASS 432
+ + ++ + LG E+ + +L++ T + G I LV + +
Sbjct: 466 AIGKRE-GIQLFISFLGLSSEQHQEYAVEMLKILTAQVDDSKWAVTAAGGIPPLVQLLET 524
Query: 433 DDNQASRDAQELLENLSFSDDNVVQ-MAKANYFKHLLQRLSAGPESVKMRMATTLAEMEL 491
+A DA +L NL + + + +A L L G + + A TL ++
Sbjct: 525 GSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFLWLLKTGGPNSQETSAKTLVKLV- 583
Query: 492 TDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRN-LSSVPQNGLQMIKEGAVGPLV 550
H A + + LL L+ D K ++ L + LS Q L A L
Sbjct: 584 ---HTA---DPATINQLLALLLGDDPTSKIQVIEVLGHVLSKASQEDLVHRGCAANKGLR 637
Query: 551 DXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPN 610
+E TA+ + L S Q L +D I L+ N
Sbjct: 638 SLVESLTSSREETKEHTASVLADLF------SSRQDICGHLATDDIINPWIKLLTNNTQN 691
Query: 611 VQQRILQTFNALCRS-PSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDD 669
V +++ + +AL R + N K + I L++L ++ + NAV L+ D
Sbjct: 692 VAKQVARALDALSRPVKNNNNKKKSYIAEGDIKSLIKLAKNSSIESAENAVSALANLLSD 751
Query: 670 GDEAIIREHVGQKCLETLVTIIQ--SSHNEEEIASAMG-ILSKLPEVPQFTQWLLDAGAL 726
D I E + + + I+ S + + A+ +L P A+
Sbjct: 752 PD--IAAEALAEDVVSAFTRILADGSPEGKRNASRALHQLLKNFPVCDVLKGSAQCRFAI 809
Query: 727 PIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGV---IPKLVQLLE 783
+++ LK+ + + F ++E V L + + N + A A V + LVQ L
Sbjct: 810 LSLVDSLKSIDVDSADAFNILE-VVALLAKTKSGVNFSYPPWIALAEVPSSLETLVQCLA 868
Query: 784 YGTTLTKEHAATSLARF-SKNSLGLSRPIPKR 814
G TL ++ A L+R S LS I R
Sbjct: 869 EGHTLVQDKAIEVLSRLCSDQQFLLSELIVSR 900
Score = 106 (42.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 64/257 (24%), Positives = 105/257 (40%)
Query: 468 LQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKAL 527
+ L G K+ +A+ L + + +L G + PLL ++ G ++ +K A +A+
Sbjct: 88 ISMLRNGTTLAKVNVASILCVLCKDKDLRLKVLLGGCIPPLLSVLKSGTMETRKAAAEAI 147
Query: 528 RNLSSVP-QN---GLQM-IKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLA-VSTMYQ 581
+SS N G+++ I EG V L D A+ +L V Y
Sbjct: 148 YEVSSAGISNDHIGMKIFITEGVVPTLWDQLSLKGNQDKVVEGYVTGALRNLCGVDDGYW 207
Query: 582 ESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAI 641
+TL S +I + SL++ PN Q L S +I+ L +
Sbjct: 208 R-----LTLEGSGVDIVV--SLLSSDNPNSQANAASLLARLVLS-FCDSIQKILNS-GVV 258
Query: 642 PVLVQLCEHDNE-NVRANAVKLFCCLVDDGDEA--IIREHVGQKCL-ETLVT----IIQS 693
L+QL E N+ NVRA+A L + DEA +++ G L E +V +Q
Sbjct: 259 KSLIQLLEQKNDINVRASAADALEALSANSDEAKKCVKDAGGVHALIEAIVAPSKECMQG 318
Query: 694 SHNEEEIASAMGILSKL 710
H + A G L+ +
Sbjct: 319 KHGQSLQEHATGALANV 335
Score = 85 (35.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 846 ANAVRPLVRVL--EDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSP 903
A V PL VL D ++L ALV ++E ++ + AI ++ FL S
Sbjct: 1510 AKTVEPLFAVLLRSDLTLWGQHSALQALVNILEKQQTLEAFS-FTPSEAIVPLISFLESS 1568
Query: 904 SPKLQEKALDSVERIFRLPEFKQKYG-KSAQMPLVDLTQRGNSSMKSLSARVLAHLN 959
S +Q+ + + + +F+Q +SA +PLV L G S++ + + L ++
Sbjct: 1569 SQAIQQLGAELLSHFLTMEDFQQDITTQSAVVPLVRLAGIGILSLQETAIKALEKIS 1625
Score = 80 (33.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 844 LEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSP 903
+ AV+PL+ +L E +L AL+ L G + + + ++ +++ LSS
Sbjct: 1297 IACQAVQPLMDILGSVSESEQEVALSALIKLSSGNTSNTALLIDVEGSLLENVIKILSSA 1356
Query: 904 --SPKLQEKALDSVERIFRLPEFKQKYGKSAQM-PLVDLTQRGNSSMKSLSARVLAHLNV 960
S +L+ A +F + S M PL+ L Q S+ ++ A V A + +
Sbjct: 1357 TASEELKINAARLCSVVFSNKNIRTSASASGCMKPLITLMQSERSA--AVEAAVFA-IKI 1413
Query: 961 LQDQSSY 967
L D +
Sbjct: 1414 LLDDEQH 1420
Score = 69 (29.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 36/157 (22%), Positives = 65/157 (41%)
Query: 807 LSRPIPKRKGFWCFSPPPEIGCQVHGGLC-GIESSFCLL-EANAVRPLVRVLEDPDHGAC 864
L RPIP R G P+ Q+ + G +++ L+ EA AV L + L +
Sbjct: 1181 LLRPIPDRPG------APQFAVQILIRIADGSDTNKLLMAEAGAVEALTKYLSLSPQDST 1234
Query: 865 EASLDALV-TLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPE 923
E ++ L+ L L+ L N + ++R L S S + A ++ +F
Sbjct: 1235 EYAISELLRVLFSNHELRQNEMALSSLNQLIAVLR-LGSRSARYS--AAGALNELFDAEN 1291
Query: 924 FKQ-KYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLN 959
+ + A PL+D+ + S + ++ L L+
Sbjct: 1292 IRNSEIACQAVQPLMDILGSVSESEQEVALSALIKLS 1328
Score = 64 (27.6 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 852 LVRVLED-PDH-GACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQE 909
LV +L PD GA + ++ L+ + +G ++ +A A++ + ++LS E
Sbjct: 1178 LVDLLRPIPDRPGAPQFAVQILIRIADGS--DTNKLLMAEAGAVEALTKYLSLSPQDSTE 1235
Query: 910 KALDSVERI-FRLPEFKQ-KYGKSAQMPLVDLTQRGNSSMKSLSARVLAHL 958
A+ + R+ F E +Q + S+ L+ + + G+ S + +A L L
Sbjct: 1236 YAISELLRVLFSNHELRQNEMALSSLNQLIAVLRLGSRSARYSAAGALNEL 1286
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 148 (57.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 226 DQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQ 285
DQI+ LE + EK FS + +QP P F CP+ +DVM +P + G
Sbjct: 739 DQILPALENLKKVA---EKARNSFS---GVSTQP--PTH-FICPLLKDVMNEPCVAADGY 789
Query: 286 TFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWK 329
T++R AIE+W + +N P+T + L + L PN TL +I EW+
Sbjct: 790 TYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLYTAIMEWR 832
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 7 VTSASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELA 47
V T AS L ++ + LE I + +K+ +ELA
Sbjct: 369 VAQTETFDASRKLGELNQRRLEEAIKLEELKLKEYEARELA 409
>TAIR|locus:2056529 [details] [associations]
symbol:AT2G05810 "AT2G05810" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC006555 EMBL:AY099770
EMBL:BT015173 IPI:IPI00537341 PIR:F84471 RefSeq:NP_178638.1
RefSeq:NP_849939.1 UniGene:At.13408 UniGene:At.75216
ProteinModelPortal:Q8S8G1 SMR:Q8S8G1 EnsemblPlants:AT2G05810.1
EnsemblPlants:AT2G05810.2 GeneID:815132 KEGG:ath:AT2G05810
TAIR:At2g05810 eggNOG:NOG247895 HOGENOM:HOG000243018
InParanoid:Q8S8G1 OMA:WSQNPLL PhylomeDB:Q8S8G1
ProtClustDB:CLSN2683236 ArrayExpress:Q8S8G1 Genevestigator:Q8S8G1
Uniprot:Q8S8G1
Length = 580
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 83/348 (23%), Positives = 143/348 (41%)
Query: 461 ANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLL---EGNV--LGPLLHLVSRG 515
A + + L RL G K + +L ++ LTD+ K++ + EGNV L LL L
Sbjct: 158 AFFIRDLFTRLQIGGAEFKKKSLESLLQL-LTDNEKSARIIAKEGNVGYLVTLLDLHHHP 216
Query: 516 DIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDXXXXXXXXXXXXREETATAIMHLA 575
I+ +A +L SS + ++G +GPL+ R A +
Sbjct: 217 LIREHALAAVSLLTSSSADSRKT-VFEQGGLGPLL-RLLETGSSPFKTRAAIAIEAITAD 274
Query: 576 VSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTL 635
+T + S+ VT+L VQ+ I A+ + I+TTL
Sbjct: 275 PATAWAISAYGGVTVL---------IEACRSGSKQVQEHIA---GAISNIAAVEEIRTTL 322
Query: 636 TQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGD---EAIIREHVGQKCLETLVTIIQ 692
+ AIPVL+QL + +V+ + G+ + I+RE G L+ L+ ++Q
Sbjct: 323 AEEGAIPVLIQLLISGSSSVQEKTANFISLISSSGEYYRDLIVRERGG---LQILIHLVQ 379
Query: 693 SSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLN-FLKNGRQNDPNRFQVVENAV 751
S N + I + LS++ + ++ L + I L +K+G Q + ++
Sbjct: 380 ESSNPDTIEHCLLALSQISAMETVSRVLSSSTRFIIRLGELIKHGNVI----LQQISTSL 435
Query: 752 GALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLAR 799
L T + KRA A + L++L+E + AAT A+
Sbjct: 436 --LSNLTIS---DGNKRAV-ADCLSSLIRLMESPKPAGLQEAATEAAK 477
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 91/469 (19%), Positives = 185/469 (39%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ +M DP+ SSG ++ER+ + + G P D S + PN L+ +I
Sbjct: 62 FLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPP----DFSTVIPNLALKSAI 117
Query: 326 EEWKDR---------NT------MITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHR 370
W +R N+ ++ + KP+ V E ++ ++D R H
Sbjct: 118 HSWCERRCFPPPKPLNSAAAEKLILALMEKKPQRRKVSVSEK-ELIQAIRDKPSVRLNHA 176
Query: 371 --EWERLAN--GDDAVESIVRSLGRRIE-ERKLAVALLLELSTCNTLRDQIGDVQGCILL 425
E +R N + ESI S R ++ K + +L + + +L
Sbjct: 177 ATELDRRPNYFNSSSDESIASS-SRTLQLTTKPSCFSSPSSGEIESLEPNLTPEEEALL- 234
Query: 426 LVTMASSDDNQASRDAQELLENLSFSDDNV-VQMAKANYFKHLLQRLSAGPESVKMRMAT 484
T S+ +A + ++ D++ + + L + + +V++ +
Sbjct: 235 --TKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTA 292
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
L + L +K ++ ++ PL+ ++ G ++ ++ + + +L+ +N + G
Sbjct: 293 VLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAI---G 349
Query: 545 AVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLI 604
+G L R ++A A+ HL++ +S++ + L + + ML ++
Sbjct: 350 VLGGLEPLLHLIRVGTELTRHDSALALYHLSLV----QSNRGKLVKLGA---VQMLLGMV 402
Query: 605 NLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHD---NENVRANAVK 661
+L G + + +L LC S + L + +V + D NE+ R + V
Sbjct: 403 SL-GQMIGRVLL----ILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVA 457
Query: 662 LFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKL 710
+ L DG + +E LV + + S E A +L L
Sbjct: 458 VLYGLSHDGGLRFKGLAMAANAVEELVKV-ERSGRERAKQKARRVLEVL 505
>UNIPROTKB|H9KVH0 [details] [associations]
symbol:KPNA7 "Importin subunit alpha" species:9823 "Sus
scrofa" [GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 GeneTree:ENSGT00610000085982
OMA:NKNPYPC EMBL:FP102574 Ensembl:ENSSSCT00000008347 Uniprot:H9KVH0
Length = 507
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 88/377 (23%), Positives = 160/377 (42%)
Query: 436 QASRDAQELLE-NLSFSDDNVVQMAKANYF--KHLLQRLSAG-PESVKMRMATTLAEMEL 491
+A +D Q L N++ + D VQ K + ++ ++A PE + AT A L
Sbjct: 37 KAKKDEQALKRRNITTASDPFVQQTKGAKLTLQEIIHGVNASDPE--QCFQATQAARKML 94
Query: 492 TDHHKASL---LEGNVLGPLLHLVSRGDIQ--MKKVAVKALRNLSSVPQNGLQMIKEG-A 545
+ L +E ++ L+ L+ R + ++ A AL N++S + + EG A
Sbjct: 95 SQERNPPLKLMVEAGLIPRLVQLL-RSSLHPCLQFEAAWALTNIASGASELTRAVVEGGA 153
Query: 546 VGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLIN 605
+ PLV+ E+ A+ ++A + ++ ++ S+ I L +L +
Sbjct: 154 IQPLVELLASSHMSVC---EQAVWALGNIA-----GDGAEFRDIVISSNA-IPHLLALAS 204
Query: 606 LTGP-NVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFC 664
P + I+ T + LCR+ + + Q +PVL L +H + V ++
Sbjct: 205 SNVPVTFLRNIVWTLSNLCRNKNPCPCDNAVKQM--LPVLSHLLQHRDSEVLSDTCWALS 262
Query: 665 CLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAG 724
L D DE I + V L LV ++ SS S + + + TQ +DAG
Sbjct: 263 YLTDGCDERI-GQVVDMGVLPRLVELMTSSELNVLTPSLRTVGNIVTGTDPQTQLAIDAG 321
Query: 725 ALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEY 784
L ++ + L + R + + + A AL A + Q+ A G +P LV LL+
Sbjct: 322 LLSVLPHLLLHPRSS------IQKEAAWALSNVAAGPHQHIQQLIA-CGALPPLVALLKN 374
Query: 785 GTTLTKEHAATSLARFS 801
G ++ A ++A F+
Sbjct: 375 GEFKVQKEAVWTVANFT 391
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 146 (56.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 29/116 (25%), Positives = 60/116 (51%)
Query: 216 RKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVM 275
+K+ + ++ ++R A P + Y ++ + P P + CPI ++VM
Sbjct: 694 KKNPMNRPDLAVVLRFIDRMKAPEVPSSETSSYANQ-----NVPRRPPSHYLCPIFQEVM 748
Query: 276 VDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDR 331
DP+ + G T+E AI +W ++G++ P+T ++ L PN L +I++W+++
Sbjct: 749 KDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDWQNQ 804
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 27 LEVMIASNNVLIKK-ESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEIL 78
++++I NN +K+ + + LE + L++L K H E ++A+E+L
Sbjct: 356 VKMVIEQNNGFMKELQMVQGRNLKLESQMRKLQDLEKE---HGEKFDTAMELL 405
>UNIPROTKB|C6K7I2 [details] [associations]
symbol:KPNA7 "Importin subunit alpha-8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606 CTD:402569 EMBL:GQ166958
EMBL:FP102574 RefSeq:NP_001156883.1 UniGene:Ssc.49527
GeneID:100302505 KEGG:ssc:100302505 Uniprot:C6K7I2
Length = 507
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 89/377 (23%), Positives = 159/377 (42%)
Query: 436 QASRDAQELLE-NLSFSDDNVVQMAKANYFKHLLQRLSAG---PESVKMRMATTLAEMEL 491
+A +D Q L N++ + D VQ + N K LQ + G + + AT A L
Sbjct: 37 KAKKDEQALKRRNITTASDPFVQ--QTNGAKLTLQEIIHGVNASDPEQCFQATQAARKML 94
Query: 492 TDHHKASL---LEGNVLGPLLHLVSRGDIQ--MKKVAVKALRNLSSVPQNGLQMIKEG-A 545
+ L +E ++ L+ L+ R + ++ A AL N++S + + EG A
Sbjct: 95 SQERNPPLKLMVEAGLIPRLVQLL-RSSLHPCLQFEAAWALTNIASGASELTRAVVEGGA 153
Query: 546 VGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLIN 605
+ PLV+ E+ A+ ++A + ++ ++ S+ I L +L +
Sbjct: 154 IQPLVELLASSHMSVC---EQAVWALGNIA-----GDGAEFRDIVISSNA-IPHLLALAS 204
Query: 606 LTGP-NVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFC 664
P + I+ T + LCR+ + + Q +PVL L +H + V ++
Sbjct: 205 SNVPVTFLRNIVWTLSNLCRNKNPCPCDNAVKQM--LPVLSHLLQHRDSEVLSDTCWALS 262
Query: 665 CLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAG 724
L D DE I + V L LV ++ SS S + + + TQ +DAG
Sbjct: 263 YLTDGCDERI-GQVVDMGVLPRLVELMTSSELNVLTPSLRTVGNIVTGTDPQTQLAIDAG 321
Query: 725 ALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEY 784
L ++ + L + R + + + A AL A + Q+ A G +P LV LL+
Sbjct: 322 LLSVLPHLLLHPRSS------IQKEAAWALSNVAAGPHQHIQQLIA-CGALPPLVALLKN 374
Query: 785 GTTLTKEHAATSLARFS 801
G ++ A ++A F+
Sbjct: 375 GEFKVQKEAVWTVANFT 391
>TAIR|locus:2125369 [details] [associations]
symbol:MCA1 "AT4G35920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006816 "calcium ion transport"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IMP] [GO:0007231 "osmosensory signaling pathway"
evidence=IMP] [GO:0033500 "carbohydrate homeostasis" evidence=IMP]
[GO:0006655 "phosphatidylglycerol biosynthetic process"
evidence=RCA] [GO:0007020 "microtubule nucleation" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
GO:GO:0005887 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006816
EMBL:AL031986 EMBL:AL161588 GO:GO:0033500 GO:GO:0007231
EMBL:AL022373 InterPro:IPR006461 Pfam:PF04749 TIGRFAMs:TIGR01571
GO:GO:0007638 EMBL:AB196960 EMBL:AY136293 EMBL:BT003430
EMBL:AF367322 EMBL:AY133604 EMBL:AK316845 IPI:IPI00520573
IPI:IPI01016603 PIR:T04702 RefSeq:NP_195317.2 RefSeq:NP_849503.1
RefSeq:NP_849504.2 UniGene:At.19123 EnsemblPlants:AT4G35920.1
EnsemblPlants:AT4G35920.2 EnsemblPlants:AT4G35920.3 GeneID:829747
KEGG:ath:AT4G35920 TAIR:At4g35920 eggNOG:NOG318325
InParanoid:Q8L7E9 OMA:KKTLSCS PhylomeDB:Q8L7E9
ProtClustDB:CLSN2680295 Genevestigator:Q8L7E9 Uniprot:Q8L7E9
Length = 421
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 55/244 (22%), Positives = 109/244 (44%)
Query: 23 VEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREI 82
V+ I ++ A+N + K++ ++ A +L+ I +L++L ++ +E L +
Sbjct: 23 VKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKISEMKKYPETREPLEGLEDAL 82
Query: 83 KGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEK 142
+ + L C R+ +YLL IV + + EI + L I+PL +L + I E E
Sbjct: 83 RRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLKIIPLITLVDNARIRERFEY 142
Query: 143 VCDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKE 202
+ D Q V+ I ++ R A+ L ++ + ALK E
Sbjct: 143 I-DRDQREYTLDEED-----RHVQDVILKQESTREAASVLKKTLSCSYPNLRFCEALKTE 196
Query: 203 FDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEP 262
++ + E++ S+ D A+ + ++I + + A A EKE+ + +KS S ++
Sbjct: 197 NEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKKASKKSERSSSMKT 256
Query: 263 LQSF 266
S+
Sbjct: 257 EYSY 260
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 133 (51.9 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 74/292 (25%), Positives = 130/292 (44%)
Query: 697 EEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRF--QVVENAVGAL 754
E+ A A+G+L+ PE + + ++D GALP ++N LK + +R V+ A A+
Sbjct: 124 EKGSAFALGLLAIKPE---YQKLIVDKGALPHLVNLLKRNKDGSSSRAVNSVIRRAADAI 180
Query: 755 RRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKR 814
A N + R G IP LV+LLE+ + + AA +L +L K
Sbjct: 181 TNL-AHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGAL-----RTLAFKNDDNKN 234
Query: 815 KGFWCFSPPPEI---GCQ---VHG---GLCG--IESSFCL----LEANAVRPLVRVLEDP 859
+ C + P I G + +H G+ G + SS + L A A++P++ +L
Sbjct: 235 QIVECNALPTLILMLGSEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSS- 293
Query: 860 DHGAC-EASLDALVTLIEGERLQNGSKV-LEDANAIDRMVRFLSSPSPKLQEKALDSVER 917
C E+ +A + L + + KV + A+ ++ L SP +L+E + ++ R
Sbjct: 294 ---CCPESQREAALLLGQFASTDSDCKVHIVQRGAVRPLIEMLQSPDVQLKEMSAFALGR 350
Query: 918 IFRLPEFKQKYGKSAQM-PLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 968
+ + + S + PL+ L N S++ +A L L +D S F
Sbjct: 351 LAQDAHNQAGIAHSGGLGPLLKLLDSRNGSLQHNAAFALYGLADNEDNVSDF 402
>CGD|CAL0000730 [details] [associations]
symbol:orf19.5682 species:5476 "Candida albicans" [GO:0000176
"nuclear exosome (RNase complex)" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0006612
"protein targeting to membrane" evidence=IEA] [GO:0000087 "M phase
of mitotic cell cycle" evidence=IEA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
CGD:CAL0000730 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 HOGENOM:HOG000167616 EMBL:AACQ01000261
RefSeq:XP_710511.1 ProteinModelPortal:Q59LB7 SMR:Q59LB7
STRING:Q59LB7 GeneID:3647872 KEGG:cal:CaO19.5682 Uniprot:Q59LB7
Length = 543
Score = 98 (39.6 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 49/213 (23%), Positives = 93/213 (43%)
Query: 600 LFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANA 659
+ L N T ++ + T + LCR S ++Q AIP L +L + +A
Sbjct: 218 VLQLFNCTKMSLIRTATWTLSNLCRGKSPQPDWNIVSQ--AIPTLGKLIYSVDAETLVDA 275
Query: 660 VKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIAS-AMGILSKLPEVPQF-T 717
L D EAI + + + LV ++ H + + A+ + + + T
Sbjct: 276 CWAVSYLSDGTSEAI-QAVIDARIPHRLVELL--GHESTLVQTPALRAIGNIVTGSDYQT 332
Query: 718 QWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPK 777
Q +++AG LP + L + + + + A + TA T + Q +A +IP+
Sbjct: 333 QIVINAGVLPALAPLLNSTKDT------IRKEACWTISNITAGTTDQIQA-VIDANLIPQ 385
Query: 778 LVQLLEYGTTLTKEHAATSLARFSKNSLGLSRP 810
+++LL +G TK+ A +++ S GL++P
Sbjct: 386 VIRLLIHGDYKTKKEACWAISNASSG--GLTKP 416
Score = 94 (38.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 45/233 (19%), Positives = 101/233 (43%)
Query: 330 DRNTMITIASMKPKLV---STEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIV 386
+R+ +++ +M+P L T++ + L +LC+ + +W ++ + ++
Sbjct: 205 NRDYVLSCNAMEPVLQLFNCTKMSLIRTATWTLSNLCRGKSPQPDWNIVSQAIPTLGKLI 264
Query: 387 RSL-GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELL 445
S+ + + AV+ L + T ++ I D + LV + + A +
Sbjct: 265 YSVDAETLVDACWAVSYLSD-GTSEAIQAVI-DAR-IPHRLVELLGHESTLVQTPALRAI 321
Query: 446 ENLSFSDDNVVQMA-KANYFKHLLQRLSAGPESVKMRMATTLAEMEL--TDHHKASLLEG 502
N+ D Q+ A L L++ ++++ T++ + TD +A +++
Sbjct: 322 GNIVTGSDYQTQIVINAGVLPALAPLLNSTKDTIRKEACWTISNITAGTTDQIQA-VIDA 380
Query: 503 NVLGPLLHLVSRGDIQMKKVAVKALRNLSS----VPQNGLQMIKEGAVGPLVD 551
N++ ++ L+ GD + KK A A+ N SS P ++ +G + PL D
Sbjct: 381 NLIPQVIRLLIHGDYKTKKEACWAISNASSGGLTKPDQIRYLVSQGCIKPLCD 433
Score = 79 (32.9 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 832 GGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIE-GE---RLQNGSK-- 885
GGL + L+ ++PL +L D E +LD+L +++ GE +N S
Sbjct: 411 GGLTKPDQIRYLVSQGCIKPLCDLLSVADSKIIEVTLDSLENILKMGEMDKEARNASVNE 470
Query: 886 ---VLEDANAIDRMVRFLSSPSPKLQEKALDSVERIF 919
+E+A ++++ ++P+ K+ +KA +E+ F
Sbjct: 471 YALFIEEAGGMEKIFECQNNPNEKIYQKAFGIIEKYF 507
Score = 45 (20.9 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 475 PESVKMRMATTLAEMELTDHHKASLL-EGNVLGPLLHLVSRGDIQMKKVAVKALRNLS 531
P+ +++ A L + D + ++ E N + + L+ +++K+ A+ AL N++
Sbjct: 142 PDMLQLEAAWALTNIASGDSSQTRVVVEANAVPLFVQLLYSQSLEVKEQAIWALGNVA 199
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 133 (51.9 bits), Expect = 0.00010, P = 0.00010
Identities = 102/442 (23%), Positives = 168/442 (38%)
Query: 372 WERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMAS 431
W L D +++ I+ + I L +A E S L D + QG LLL M S
Sbjct: 336 WRDLIRKDKSIDEIMLWIEWIISHTLLRIA---ESSNSQGLNDFWLN-QGATLLLSLMQS 391
Query: 432 SDDNQASRDAQELLENLSFSDDNV-VQMAKANY------FKHLLQRLSAGPESVKMRMAT 484
+ ++ R A L + D+N + +A + LL+ + E ++ A
Sbjct: 392 AQEDVQERAATGLATFIVVDDENASIDCGRAEAVMRDGGIRLLLELAKSWREGLQSEAAK 451
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
+A + + ++ E + L L + + + A L NLS ++ + + G
Sbjct: 452 AIANLSVNAKVAKAVAEEGGISVLADLAKSMNRLVAEEAAGGLWNLSVGEEHKNAIAQAG 511
Query: 545 AVGPLVDXXXXXXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLI 604
V LVD E A A+ +LA + V + ML
Sbjct: 512 GVNALVDLIFRWPHGCDGVLERAAGALANLAAD----DKCSMEVARAGGVHALVMLARNC 567
Query: 605 NLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAV-KLF 663
G +Q N S GN + A+ LVQL + +E V+ A L+
Sbjct: 568 KYEGAQ-EQAARALANLAAHGDSNGNNAAVGQEAGALEALVQLTQSPHEGVKQEAAGALW 626
Query: 664 CCLVDDGDEAIIREHVGQKCLETLVTIIQSSHN-----EEEIASAMGILSKLPEVPQFTQ 718
DD + I G +E LV + +SS N +E +A A+ LS + E
Sbjct: 627 NLAFDDKNRESIAAFGG---VEALVALAKSSSNASTGLQERVAGALWGLS-VSEANSIA- 681
Query: 719 WLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTA-PTNLEWQKRAAEAGVIPK 777
+ G +P ++ +++ ++ V E A GAL + P N R E G +
Sbjct: 682 -IGHEGGIPPLIALVRSEAED------VHETAAGALWNLSFNPGNA---LRIVEEGGVVA 731
Query: 778 LVQLLEYGTT-LTKEHAATSLA 798
LVQL + + + AA +LA
Sbjct: 732 LVQLCSSSVSKMARFMAALALA 753
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 59/277 (21%), Positives = 123/277 (44%)
Query: 288 ERSAIEKWFSDGNNLCPLTMTVLDT--SILRPNKTLRQSIEEWKDRNTMITI--ASMKPK 343
++ ++E+W S N+L P ++ T KT+ IE+ + ++ K K
Sbjct: 28 DKQSVEEWLSRVNSLIPSVLSKAKTVKKFTGRWKTIISKIEQIPACLSDLSSHPCFSKNK 87
Query: 344 LVSTEVEEVLHCLEQLQDLCQQ--RDQHREWERLANGDDAVESIV----RSLGRRIEERK 397
L + +++ V L ++ +L +Q D++ R+ + D++ + R G I+
Sbjct: 88 LCNEQLQSVAKTLSEVIELAEQCSTDKYEGKLRMQSDLDSLSGKLDLNLRDCGVLIKTGV 147
Query: 398 LAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ 457
L A L + ++ +I ++ L+ ++ +A E L D+ +V
Sbjct: 148 LGEATLPLYISSSSETPKISSLKE----LLARLQIGHLESKHNALESLLGAMQEDEKMVL 203
Query: 458 M---AKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSR 514
M +AN L+Q L+A ++ + ++ + + H L+ VL PL+ L+
Sbjct: 204 MPLIGRANVAA-LVQLLTATSTRIREKAVNLISVLAESGHCDEWLISEGVLPPLVRLIES 262
Query: 515 GDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
G ++ K+ A A++ LS +N ++ G + PL+D
Sbjct: 263 GSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLID 299
>UNIPROTKB|F1NJS6 [details] [associations]
symbol:KPNA2 "Importin subunit alpha" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IEA] [GO:0008139 "nuclear localization sequence
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008139 GO:GO:0006607
GeneTree:ENSGT00610000085982 OMA:LMIEECG EMBL:AADN02030017
IPI:IPI00571040 PRIDE:F1NJS6 Ensembl:ENSGALT00000005672
Uniprot:F1NJS6
Length = 528
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 73/382 (19%), Positives = 163/382 (42%)
Query: 436 QASRDAQELLE-NLS-FSDD--NVVQMAKANYFK-HL-LQRLSAGPES--VKMRMATTLA 487
+A +D Q L N+S F DD + +Q ++N H ++ + G S +++++ T A
Sbjct: 39 KAKKDDQMLKRRNVSTFPDDATSPLQENRSNQVSAHWSVEEIVKGVNSNNMELQLQATQA 98
Query: 488 EMELTDHHKA----SLLEGNVLGPLLHLVSRGDIQ-MKKVAVKALRNLSSVPQNGLQMIK 542
+L K ++++ ++ + +SR D ++ + AL N++S + +
Sbjct: 99 ARKLLSREKQPPIDNIIQAGLIPKFVSFLSRADCSPIQFESAWALTNIASGTSEQTKAVV 158
Query: 543 EGAVGPLVDXXXXXXXXXXXXREETATAIMHLAVS-TMYQESSQTPVTLLESDKEIFMLF 601
+G G + E+ A+ ++A ++Y++ V + + + L
Sbjct: 159 DG--GAIPAFISLLASPHIHISEQAVWALGNIAGDGSIYRDL----VIKFGAIEPLLTLL 212
Query: 602 SLINLTG--PNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANA 659
++ +L+ + + T + LCR+ + + Q +P LV+L HD+ V A+
Sbjct: 213 AVPDLSSLASGYLRNVTWTLSNLCRNKNPAPPIEAIEQI--LPTLVRLLHHDDHEVLADT 270
Query: 660 VKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQW 719
L D ++ I V + LV ++ S I + + + TQ
Sbjct: 271 CWALSYLTDGSNDRI-EVVVKTGLVPQLVKLLGCGELPIVTPSLRAIGNIVTGTDEQTQI 329
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 779
++D+GAL + + L + + N + + A + TA + Q+ + G++P L+
Sbjct: 330 VIDSGALSVFPSLLSHHKNN------IQKEAAWTMSNITAGRQDQIQQ-VVDHGLVPYLI 382
Query: 780 QLLEYGTTLTKEHAATSLARFS 801
+L G +++ A ++ ++
Sbjct: 383 GILRKGDFKSQKEAVWAVTNYT 404
Score = 108 (43.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 77/357 (21%), Positives = 151/357 (42%)
Query: 436 QASRDAQELLENLSFSD-DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDH 494
QA++ A++LL DN++Q F L R P + A T ++
Sbjct: 94 QATQAARKLLSREKQPPIDNIIQAGLIPKFVSFLSRADCSPIQFESAWALTNIASGTSEQ 153
Query: 495 HKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLS---SVPQNGLQMIKEGAVGPLVD 551
KA +++G + + L++ I + + AV AL N++ S+ ++ +IK GA+ PL+
Sbjct: 154 TKA-VVDGGAIPAFISLLASPHIHISEQAVWALGNIAGDGSIYRD--LVIKFGAIEPLLT 210
Query: 552 XXXX---XXXXXXXXREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTG 608
R T T +S + + + P +E+ ++I L +L+ L
Sbjct: 211 LLAVPDLSSLASGYLRNVTWT------LSNLCRNKNPAPP--IEAIEQI--LPTLVRLLH 260
Query: 609 PNVQQRILQTFNALCRSPSAGNIKT-TLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLV 667
+ + + T AL N + + + +P LV+L + +++ +V
Sbjct: 261 HDDHEVLADTCWALSYLTDGSNDRIEVVVKTGLVPQLVKLLGCGELPIVTPSLRAIGNIV 320
Query: 668 DDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIAS-AMGILSKLPEVPQFT-QWLLDAGA 725
DE + + L +++ SH++ I A +S + Q Q ++D G
Sbjct: 321 TGTDEQT-QIVIDSGALSVFPSLL--SHHKNNIQKEAAWTMSNITAGRQDQIQQVVDHGL 377
Query: 726 LPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLL 782
+P ++ L+ G D F+ + AV A+ +T+ ++ +AGV+ L+ LL
Sbjct: 378 VPYLIGILRKG---D---FKSQKEAVWAVTNYTSGGTIDQIVYLVQAGVVEPLLNLL 428
Score = 65 (27.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 19/91 (20%), Positives = 42/91 (46%)
Query: 837 IESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTL-IEGERLQNGSKV---LEDANA 892
I+ L++A V PL+ +L D LDA+ + + E++ K+ +E+
Sbjct: 409 IDQIVYLVQAGVVEPLLNLLTAKDSKTVLVILDAVSNIFLAAEKINETEKLCLMIEECGG 468
Query: 893 IDRMVRFLSSPSPKLQEKALDSVERIFRLPE 923
+D++ S + ++ + + +E+ F E
Sbjct: 469 LDKIEALQSHENEQVYKASATLIEKYFSAEE 499
>RGD|621419 [details] [associations]
symbol:Kpna2 "karyopherin alpha 2" species:10116 "Rattus
norvegicus" [GO:0006606 "protein import into nucleus"
evidence=ISO;TAS] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=ISO] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0008139 "nuclear localization sequence
binding" evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0046015 "regulation of transcription by glucose"
evidence=IDA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
RGD:621419 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 eggNOG:COG5064
GO:GO:0006606 GO:GO:0046015 HOVERGEN:HBG001846 KO:K15043
HSSP:P52292 IPI:IPI00207940 RefSeq:NP_445935.2 UniGene:Rn.2949
GeneID:85245 KEGG:rno:85245 EMBL:AJ130946 ProteinModelPortal:Q9Z0N9
SMR:Q9Z0N9 DIP:DIP-46496N STRING:Q9Z0N9 UCSC:RGD:621419
InParanoid:Q9Z0N9 NextBio:617314 Genevestigator:Q9Z0N9
Uniprot:Q9Z0N9
Length = 529
Score = 97 (39.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 44/185 (23%), Positives = 83/185 (44%)
Query: 618 TFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIRE 677
T + LCR+ + + Q +P LV+L H++ V A++ L D E I E
Sbjct: 232 TLSNLCRNKNPAPPLDAVEQI--LPTLVRLLHHNDPEVLADSCWAISYLTDGPIERI--E 287
Query: 678 HVGQK-CLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNG 736
V +K + LV ++ ++ + I + + + TQ ++DAGAL + + L N
Sbjct: 288 MVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP 347
Query: 737 RQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATS 796
+ N + + A + TA + Q+ G++P LV +L T++ AA +
Sbjct: 348 KTN------IQKEATWTMSNITAGRQDQIQQ-VVNHGLVPFLVGVLSKADFKTQKEAAWA 400
Query: 797 LARFS 801
+ ++
Sbjct: 401 ITNYT 405
Score = 69 (29.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 436 QASRDAQELLENLSFSD-DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDH 494
QA++ A++LL DN+++ F L + P + A T ++
Sbjct: 95 QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 154
Query: 495 HKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLS---SVPQNGLQMIKEGAVGPLV 550
KA +++G + + L++ + + AV AL N++ SV ++ +IK GA+ PL+
Sbjct: 155 TKA-VVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRD--LVIKHGAIDPLL 210
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 852 LVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKA 911
LV VL D + + A+ G ++ L I+ ++ LS+ K+ +
Sbjct: 382 LVGVLSKADFKTQKEAAWAITNYTSGGTVEQ-IVYLVHCGIIEPLMNLLSAKDTKIIQVI 440
Query: 912 LDSVERIFRLPEFKQKYGKSAQMPLV 937
LD++ IF+ E K G++ ++ ++
Sbjct: 441 LDAISNIFQAAE---KLGETEKLSIM 463
>TAIR|locus:2827953 [details] [associations]
symbol:MCA2 "AT2G17780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0048528
"post-embryonic root development" evidence=IGI] [GO:0070509
"calcium ion import" evidence=IGI] GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0070509
InterPro:IPR006461 Pfam:PF04749 TIGRFAMs:TIGR01571 GO:GO:0048528
EMBL:AB196961 IPI:IPI00541685 IPI:IPI00656623 IPI:IPI00657113
IPI:IPI00657538 RefSeq:NP_001031366.1 RefSeq:NP_001031367.1
RefSeq:NP_001031368.1 RefSeq:NP_179369.2 UniGene:At.40099
EnsemblPlants:AT2G17780.1 GeneID:816287 KEGG:ath:AT2G17780
TAIR:At2g17780 eggNOG:NOG292452 HOGENOM:HOG000030376
InParanoid:Q3EBY6 OMA:PLINMAD PhylomeDB:Q3EBY6
ProtClustDB:CLSN2690755 Genevestigator:Q3EBY6 Uniprot:Q3EBY6
Length = 416
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 56/255 (21%), Positives = 114/255 (44%)
Query: 4 LDVVTSASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKR 63
L + S + + +AL +++ I+ A+N + K++ ++ A +L+ I +L+++
Sbjct: 8 LGEIASVAQLTGIDAL-KLIGMIVN---AANTARMHKKNCRQFAHHLKLIRNLLEQIKNS 63
Query: 64 DLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALG 123
+++ + ++ L+ ++ + L C +++ +YLL IV + + EI L
Sbjct: 64 EMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDLFLK 123
Query: 124 ILPLASLDLSTDIIEEIEKV-CDNMQXXXXXXXXXXXXXLEKVESGIQERNVDRSYANHL 182
I+PL ++ + I E +E + D + + K ES R S
Sbjct: 124 IVPLINMADNARIRERLEAIERDQREYTLDEEDRKVQDVILKQES---TREAATSVLKKT 180
Query: 183 LSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPR 242
LS +G ALK E ++ + E++ SR R D A Q + I L++ A++
Sbjct: 181 LSRSYPNMGFC---EALKTEEEKLQLELQRSRARYD---ADQCEVIQRLIDVTQTAATVE 234
Query: 243 EKEMKYFSKRKSLGS 257
K +K++ L S
Sbjct: 235 PNLEKVLTKKEELTS 249
>POMBASE|SPBC1604.08c [details] [associations]
symbol:imp1 "importin alpha" species:4896
"Schizosaccharomyces pombe" [GO:0000087 "M phase of mitotic cell
cycle" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IDA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IMP]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185 PomBase:SPBC1604.08c
GO:GO:0005525 GO:GO:0005829 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0007067
GO:GO:0033554 GO:GO:0008565 EMBL:CU329671 GO:GO:0005643
GenomeReviews:CU329671_GR eggNOG:COG5064 GO:GO:0040023
GO:GO:0006607 GO:GO:0000087 HOGENOM:HOG000167616 HSSP:Q02821
OrthoDB:EOG408RH7 PIR:T39506 RefSeq:NP_596632.1
ProteinModelPortal:O94374 SMR:O94374 IntAct:O94374 STRING:O94374
PRIDE:O94374 EnsemblFungi:SPBC1604.08c.1 GeneID:2539928
KEGG:spo:SPBC1604.08c OMA:EMIANIQ NextBio:20801071 Uniprot:O94374
Length = 539
Score = 107 (42.7 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 46/191 (24%), Positives = 85/191 (44%)
Query: 618 TFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAI--I 675
T + LCR + +T++ A+P+L +L ++ + +A L D +E I I
Sbjct: 229 TLSNLCRGKNPPPNWSTISV--AVPILAKLLYSEDVEIIVDACWAISYLSDGPNEKIGAI 286
Query: 676 REHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKN 735
+ VG C LV ++ S + + + + + TQ ++D GAL + L +
Sbjct: 287 LD-VG--CAPRLVELLSSPSVNIQTPALRSVGNIVTGTDAQTQIIIDCGALNAFPSLLSH 343
Query: 736 GRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAAT 795
++N + + A + TA N + + E+ +IP LV LL Y TK+ A
Sbjct: 344 QKEN------IRKEACWTISNITAG-NTQQIQAIIESNLIPPLVHLLSYADYKTKKEACW 396
Query: 796 SLARFSKNSLG 806
+++ + LG
Sbjct: 397 AISNATSGGLG 407
Score = 105 (42.0 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 46/218 (21%), Positives = 95/218 (43%)
Query: 346 STEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLE 405
+++V + + L +LC+ ++ W ++ + ++ S E+ ++ V
Sbjct: 217 ASDVSMLRNATWTLSNLCRGKNPPPNWSTISVAVPILAKLLYS-----EDVEIIVDACWA 271
Query: 406 LSTCNT-LRDQIGDVQ--GCILLLVTMASSDDNQASRDAQELLENLSFSDDN----VVQM 458
+S + ++IG + GC LV + SS A + N+ D ++
Sbjct: 272 ISYLSDGPNEKIGAILDVGCAPRLVELLSSPSVNIQTPALRSVGNIVTGTDAQTQIIIDC 331
Query: 459 AKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKA-SLLEGNVLGPLLHLVSRGDI 517
N F LL S E+++ T++ + + + +++E N++ PL+HL+S D
Sbjct: 332 GALNAFPSLL---SHQKENIRKEACWTISNITAGNTQQIQAIIESNLIPPLVHLLSYADY 388
Query: 518 QMKKVAVKALRNLSS----VPQNGLQMIKEGAVGPLVD 551
+ KK A A+ N +S P ++ +G + PL D
Sbjct: 389 KTKKEACWAISNATSGGLGQPDQIRYLVSQGVIKPLCD 426
Score = 63 (27.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 832 GGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIE-GER-----LQNGSK 885
GGL + L+ ++PL +L D+ + +LDA+ +++ GE L+N ++
Sbjct: 404 GGLGQPDQIRYLVSQGVIKPLCDMLNGSDNKIIQVALDAIENILKVGEMDRTMDLENINQ 463
Query: 886 V---LEDANAIDRMVRFLSSPSPKLQEKALDSVERIF 919
+E+A +D + SS + + KA +E+ F
Sbjct: 464 YAVYVEEAGGMDMIHDLQSSGNNDIYLKAYSIIEKYF 500
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 19/93 (20%), Positives = 41/93 (44%)
Query: 192 ISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSK 251
+S RS K + FK++ E R R++Q ++ + L + ++ + ++ +
Sbjct: 6 LSDRRSRFKSK-GVFKAD-ELRRQREEQQIEIRKQKREESLNKRRNLNAVLQNDIDVEEE 63
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSG 284
Q + ++ + +T DVM D +E G
Sbjct: 64 ADQSQVQMEQQMKDEFPKLTADVMSDDIELQLG 96
>UNIPROTKB|G4MZS0 [details] [associations]
symbol:MGG_15072 "Importin subunit alpha" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606 EMBL:CM001232
RefSeq:XP_003715241.1 ProteinModelPortal:G4MZS0 SMR:G4MZS0
EnsemblFungi:MGG_15072T0 GeneID:12985596 KEGG:mgr:MGG_15072
Uniprot:G4MZS0
Length = 551
Score = 117 (46.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 55/215 (25%), Positives = 100/215 (46%)
Query: 603 LINLTGPNVQQRILQ----TFNALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRAN 658
L+NL G + + +L+ T + CR + TT+ A+PVL +L ++ V +
Sbjct: 213 LLNLLGDSRKLSMLRNATWTLSNFCRGKTPQPDWTTIAP--ALPVLAKLVYSLDDEVLID 270
Query: 659 AVKLFCCLVD---DGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQ 715
A L D D +A+I + ++ +E L+ S+ + ++G + +V
Sbjct: 271 ACWAISYLSDGSNDKIQAVIEAGIPRRLVELLMHA--STSVQTPALRSVGNIVTGDDVQ- 327
Query: 716 FTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVI 775
TQ +++ GALP +L+ L G D R + A + TA + + Q +A +I
Sbjct: 328 -TQVIINCGALPCLLSLL--GSNKDGIR----KEACWTISNITAGNSAQIQS-VVDANII 379
Query: 776 PKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRP 810
P L+ LL G T++ A +++ + S GL +P
Sbjct: 380 PPLIHLLSNGDLKTRKEACWAIS--NATSGGLQKP 412
Score = 114 (45.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 49/234 (20%), Positives = 101/234 (43%)
Query: 331 RNTMITIASMKPKLV----STEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIV 386
R+ +++ ++KP L S ++ + + L + C+ + +W +A + +V
Sbjct: 201 RDYVLSCGALKPLLNLLGDSRKLSMLRNATWTLSNFCRGKTPQPDWTTIAPALPVLAKLV 260
Query: 387 RSLGRRIE-ERKLAVALLLELSTCNTLRDQIGDV--QGCILLLVTMASSDDNQASRDAQE 443
SL + + A++ L + S D+I V G LV + A
Sbjct: 261 YSLDDEVLIDACWAISYLSDGSN-----DKIQAVIEAGIPRRLVELLMHASTSVQTPALR 315
Query: 444 LLENLSFSDDNVVQMA-KANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKA-SLLE 501
+ N+ DD Q+ LL L + + ++ T++ + + + S+++
Sbjct: 316 SVGNIVTGDDVQTQVIINCGALPCLLSLLGSNKDGIRKEACWTISNITAGNSAQIQSVVD 375
Query: 502 GNVLGPLLHLVSRGDIQMKKVAVKALRNLSS----VPQNGLQMIKEGAVGPLVD 551
N++ PL+HL+S GD++ +K A A+ N +S P ++ +G + PL D
Sbjct: 376 ANIIPPLIHLLSNGDLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIKPLCD 429
Score = 57 (25.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 832 GGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDAN 891
GGL + L+ ++PL +L PD+ + +LD L +++ L + E +
Sbjct: 407 GGLQKPDQIRYLVAQGCIKPLCDLLSCPDNKIIQVALDGLENILKVGDLDKQAAG-EGQD 465
Query: 892 AIDRMVRFLSSPS--PKLQEKALDSVERIF 919
+I+R F+ K+ E ++ E I+
Sbjct: 466 SINRYALFIEECGGMEKIHECQTNANEEIY 495
>UNIPROTKB|F1LT58 [details] [associations]
symbol:F1LT58 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 Pfam:PF00514 Pfam:PF01749 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006606 GeneTree:ENSGT00610000085856 IPI:IPI00359040
PRIDE:F1LT58 Ensembl:ENSRNOT00000000139 Uniprot:F1LT58
Length = 415
Score = 98 (39.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 48/206 (23%), Positives = 92/206 (44%)
Query: 602 SLIN--LTGPNVQQRILQTFNA------LCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNE 653
S++N LT R+ T NA LCR + ++ C +PVL +L +
Sbjct: 209 SILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPC--LPVLSRLLFSSDS 266
Query: 654 NVRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIAS-AMGILSKLPE 712
++ A+A L DG I+ + LV ++ HN+ ++AS A+ + +
Sbjct: 267 DLLADACWALSYL-SDGPNEKIQAVIDSGVCRRLVELLM--HNDYKVASPALRAVGNIVT 323
Query: 713 VPQF-TQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAE 771
TQ +L+ ALP +L+ L + +++ + + A + TA + Q +
Sbjct: 324 GDDIQTQVILNCSALPCLLHLLSSSKES------IRKEACWTISNITAGNRAQIQA-VID 376
Query: 772 AGVIPKLVQLLEYGTTLTKEHAATSL 797
A + P L+++L+ T++ AA ++
Sbjct: 377 ANIFPVLIEILQKAEFRTRKEAAWAI 402
Score = 73 (30.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 424 LLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMA 483
LL+ + SS + S +E++E L FSDD+ +Q+A F+ LL + S P+S A
Sbjct: 66 LLMDSYVSSTTGE-SVITREMVEML-FSDDSDLQLATTQKFRKLLSKESFPPKSSAPPSA 123
Query: 484 TTLAE-MELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKA 526
+ +E + L+ L ++ S G Q K+ ++A
Sbjct: 124 GVVDRFVEFLKRSENCTLQFEAAWALTNIAS-GTSQQTKIVIEA 166
>ZFIN|ZDB-GENE-030616-533 [details] [associations]
symbol:ankar "ankyrin and armadillo repeat
containing" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR002110 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50088 PROSITE:PS50176 SMART:SM00185
SMART:SM00248 ZFIN:ZDB-GENE-030616-533 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:CT737230 CTD:150709 GeneTree:ENSGT00680000100065
IPI:IPI00758871 RefSeq:NP_001035135.2 UniGene:Dr.85578
Ensembl:ENSDART00000100342 GeneID:368636 KEGG:dre:368636
NextBio:20813084 ArrayExpress:F1QF11 Bgee:F1QF11 Uniprot:F1QF11
Length = 1400
Score = 129 (50.5 bits), Expect = 0.00045, P = 0.00045
Identities = 90/405 (22%), Positives = 161/405 (39%)
Query: 564 REETATA--IMHLAVSTMYQESSQTPVTLLESDKEIF-MLFSLINLTGPNVQQRILQTFN 620
REE + +HLA + + + + L ++ +L ++ + ++ L
Sbjct: 665 REEDSKGNNCVHLAALYFHTDVLKHLIQLNLDGLPVWKILVEMLQIEDFKRMEKTLGCLE 724
Query: 621 ALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVG 680
ALC + + + +PVLV L D + V+ A + C + ++ + E V
Sbjct: 725 ALCVNTES--FSEDILDAGGVPVLVSLLCSDRQVVQCMATAVLCHMTENSQ--VCEELVH 780
Query: 681 QKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLL-DAGALPIVLNFLKNGRQN 739
+ L+ ++ S H E + IL+ L + Q L+ D G + +V+N L + Q+
Sbjct: 781 HGAVPILIKLL-SVHQPELDSRCAVILADLAAHSKQHQSLIADLGGVALVVNLLTSDLQD 839
Query: 740 DPNRFQVVENAVGALRRFT--APTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSL 797
V+ N V +R +P N Q A AG +P L+Q+L + +E A +L
Sbjct: 840 ------VLVNGVRCIRTLCVRSPHN---QTAVAHAGGVPHLIQILAVDSDTLQEEACLAL 890
Query: 798 ARFSKNSLGLSRPIPKRKGFWCFSPP---PEIGCQVHGG-----LCGIESSF--CLLEAN 847
A S+ I + +I +V L S+ C L +
Sbjct: 891 AELSRGHRENQALICEAGAVGALVQALRHRKISVKVKAASALESLASHNSAIQQCFLRQS 950
Query: 848 AVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKL 907
A + L+++L E AL L G+ L N K++ + ++ L SPS K+
Sbjct: 951 APKYLLQLLTVFQLDVREQGAIALWALA-GQSL-NQQKLMAEQMGYSVILDLLLSPSDKI 1008
Query: 908 QEKALDSVERIFRLPEFKQK--YGKSAQMPLVDLTQRGNSSMKSL 950
Q +V + R Q ++ PLV L + + K+L
Sbjct: 1009 QYVGCRAVIALSRDSRIHQNGFCRENGVPPLVRLLRGSRTGQKTL 1053
>UNIPROTKB|E1C4J0 [details] [associations]
symbol:KPNA5 "Importin subunit alpha" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00610000085856 CTD:3841 OMA:IFPILIE EMBL:AADN02001990
IPI:IPI00584385 RefSeq:XP_419770.2 UniGene:Gga.54182
Ensembl:ENSGALT00000024093 GeneID:421738 KEGG:gga:421738
NextBio:20824463 Uniprot:E1C4J0
Length = 539
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 74/343 (21%), Positives = 146/343 (42%)
Query: 591 LESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPV-LVQLCE 649
L K LF N++ P ++ ++++ + P + + + I V +VQ+
Sbjct: 38 LRKQKREEQLFKRRNVSLPGNEESMVES---PIQDPDISST-VPIPEEEVITVDMVQMIF 93
Query: 650 HDNENVRANAVKLFCCLVDDGDEAIIREHVGQK--CLETLVTIIQSSHNEE-EIASAMGI 706
D+ + + A + F L+ I E + QK ++ V ++ S N + +A +
Sbjct: 94 SDDPDQQLTATQKFRKLLSKEPNPPIDEVI-QKPGVVQRFVKFLERSENYTLQFEAAWAL 152
Query: 707 LSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQ 766
+ T+ +++ GA+PI + L + ++ V E AV AL A N E +
Sbjct: 153 TNIASGTFLHTKVVIETGAVPIFIKLLSSEHED------VQEQAVWALGNI-AGDNAECR 205
Query: 767 KRAAEAGVIPKLVQLLEYGTTLTKEH----AATSLARFSKNSLGLSRPIPKRKGF--WCF 820
G++P L++LL LT A ++L R S+ P F
Sbjct: 206 DFVLNCGILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPDFSKVAPCLNVLSRLLF 265
Query: 821 SPPPEI---GCQVHGGLC-GIESSF-CLLEANAVRPLVRVLEDPDHGACEASLDALVTLI 875
S P++ C L G ++++ R LV +L D+ +L A+ ++
Sbjct: 266 SSDPDVLADACWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIV 325
Query: 876 EGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI 918
G+ +Q ++V+ + +A+ ++ LSSP ++++A +V I
Sbjct: 326 TGDDIQ--TQVILNCSALPCLLHLLSSPKESIRKEACWTVSNI 366
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 205 EFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQ 264
E S E +Q A+ M + + A A + R K ++ K+ + +P E
Sbjct: 143 ELNSLKETCEAALNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPD 202
Query: 265 SFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQS 324
C IT ++ DPV + SG T+ER+AI + P+T +D + L PN ++++
Sbjct: 203 YLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIKEA 262
Query: 325 IEEWKDRN 332
+ + +++
Sbjct: 263 VAAYLEKH 270
>ZFIN|ZDB-GENE-050522-22 [details] [associations]
symbol:kpna5 "karyopherin alpha 5 (importin alpha
6)" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 ZFIN:ZDB-GENE-050522-22 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 eggNOG:COG5064 GO:GO:0006606 HOGENOM:HOG000167616
GeneTree:ENSGT00610000085856 HSSP:Q02821 EMBL:BC095356
IPI:IPI00499956 RefSeq:NP_001018163.1 UniGene:Dr.38262
ProteinModelPortal:Q503E9 Ensembl:ENSDART00000102027 GeneID:553205
KEGG:dre:553205 CTD:3841 InParanoid:Q503E9 OrthoDB:EOG4NP739
NextBio:20879995 Bgee:Q503E9 Uniprot:Q503E9
Length = 536
Score = 123 (48.4 bits), Expect = 0.00059, P = 0.00059
Identities = 67/289 (23%), Positives = 122/289 (42%)
Query: 644 LVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVGQK-CLETLVTIIQSSHN-EEEIA 701
++Q+ ++ + + A + F L+ I E +G + V ++ S N +
Sbjct: 85 VIQMIFSEDPDQQLIATQKFRKLLSKEPNPPIDEVIGTPGVVNRFVEFLRRSDNCTLQFE 144
Query: 702 SAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPT 761
+A + + Q T+ +++ GA+PI + L N D V E AV AL A
Sbjct: 145 AAWALTNIASGTFQHTKVVIETGAVPIFIELL-NSEYED-----VQEQAVWALGNI-AGD 197
Query: 762 NLEWQKRAAEAGVIPKLVQLLEYGTTLTKEH----AATSLARFSKN---SLGLSRPIPKR 814
N E + G++P L QLL LT A ++L R KN P
Sbjct: 198 NAECRDYVLNCGILPSLQQLLAKSNRLTTTRNAVWALSNLCR-GKNPPPDFAKVSPCLSV 256
Query: 815 KGFWCFSPPPEI---GCQVHGGLC-GIESSF-CLLEANAVRPLVRVLEDPDHGACEASLD 869
FS P++ C L G ++++ R LV +L D+ +L
Sbjct: 257 LSRLLFSSDPDVLADACWALSYLSDGPNDKIQTVIDSGVCRRLVELLMHSDYKVVSPALR 316
Query: 870 ALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI 918
A+ ++ G+ +Q ++V+ + +A+ ++ LSSP ++++A +V I
Sbjct: 317 AVGNIVTGDDIQ--TQVILNCSALPCLLHLLSSPKESIKKEACWTVSNI 363
>FB|FBgn0040233 [details] [associations]
symbol:cana "CENP-ana" species:7227 "Drosophila melanogaster"
[GO:0003777 "microtubule motor activity" evidence=ISS;NAS]
[GO:0008574 "plus-end-directed microtubule motor activity"
evidence=ISS] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005871 GO:GO:0000090
GO:GO:0005874 GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
HSSP:P17119 ChiTaRS:CG33695 EMBL:AF220354 ProteinModelPortal:Q9NCF9
SMR:Q9NCF9 STRING:Q9NCF9 PRIDE:Q9NCF9 FlyBase:FBgn0040233
InParanoid:Q9NCF9 OrthoDB:EOG412JM8 ArrayExpress:Q9NCF9
Uniprot:Q9NCF9
Length = 1931
Score = 129 (50.5 bits), Expect = 0.00064, P = 0.00064
Identities = 93/430 (21%), Positives = 182/430 (42%)
Query: 5 DVVTSASTV-PASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNK- 62
D + +TV A L ++A+ E M A + K+ ++ ++ + LK L +
Sbjct: 1474 DAIDENTTVREAKVGLENSLKAVQENMSAQESQF--KQKIADIKGSVDELQIKLKSLQEV 1531
Query: 63 RDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQAL 122
RD H E N E L R++K A+EL K K L + R +L+ T ++ + L
Sbjct: 1532 RD--HLESRN---EELKRKLKDAQELQNMVDKERK--LNSSLREDFDKLEQTKLDLEEQL 1584
Query: 123 GILPLASLDLSTDIIEEIEKVCDNMQXXXXXXXXXXXXXLEKVESGIQERNV-DRSYANH 181
+ +D + + E+ K C+N++ E + I + + +
Sbjct: 1585 RAKKV-EIDRRSKELGEVTKDCENIRSDLEAQTNDFLKERETLNLTISDLRLHNEQLLET 1643
Query: 182 LLSLIADAVGISTERSALKKEFDEFKSEIENSRM-RKDQAEAVQMDQIIALLERADAASS 240
+ ++D + +KK + E ++ R R+ + E Q + LL+ + S+
Sbjct: 1644 SKNYLSDITAANNLNLEMKKNLHDLTKECKSLRSDRQSKEEYFQTQK--QLLD--ETISN 1699
Query: 241 PREKEMKYFSKRKSLGSQPL-EPLQSFYCPITRDVMVDPVETSSGQTFERSAI--EKWFS 297
+E+ K K S G++ L E + + ++ ++ + + ER + EK
Sbjct: 1700 LKEENRKMEEKLSS-GNKALNEDCEKLRSTLESKELI--LQQNKQELEERLTVINEK--- 1753
Query: 298 DGNNLCPLTMTVLDTSILRPNKTLRQSIEE-WKDRNTMITIASMKPKLVSTEVEEVLHCL 356
+G N +LD L+ N+T +S+++ W ++ I A+ + + V++
Sbjct: 1754 NGKN------ALLDAQ-LKSNETAFKSLQKAWIKQSLAIEAANKRSLEMEQMVDKRTREY 1806
Query: 357 EQLQDLCQQRDQH--REWERLANGDDAVESIVRSLGRRIEERKLAVALLL-----ELSTC 409
E+L+ + R+ + E ER+ D + S++ R +EE+ V LL EL
Sbjct: 1807 EELRSTLKTREINFRSEKERM---DGTISSLLEDK-RNLEEKLCTVTELLAKLKRELPAL 1862
Query: 410 NTLRDQIGDV 419
+T + GDV
Sbjct: 1863 HTQKVNGGDV 1872
>TAIR|locus:2043709 [details] [associations]
symbol:AT2G45720 "AT2G45720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC003680 EMBL:AC004665
EMBL:BT015356 EMBL:BT015888 IPI:IPI00524023 PIR:T00885
RefSeq:NP_001031543.1 RefSeq:NP_182096.1 UniGene:At.28663
UniGene:At.36601 ProteinModelPortal:O64651 SMR:O64651 PaxDb:O64651
EnsemblPlants:AT2G45720.1 EnsemblPlants:AT2G45720.2 GeneID:819180
KEGG:ath:AT2G45720 TAIR:At2g45720 eggNOG:NOG268795
HOGENOM:HOG000239669 InParanoid:O64651 OMA:RSIVGHG PhylomeDB:O64651
ProtClustDB:CLSN2683369 ArrayExpress:O64651 Genevestigator:O64651
Uniprot:O64651
Length = 553
Score = 103 (41.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 436 QASRDAQELLENLSFSDDNVV--QMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTD 493
++ R A E L + D+ V + + N L+Q L+A SV+ T + + +
Sbjct: 164 ESKRKALEQLVEVMKEDEKAVITALGRTNVAS-LVQLLTATSPSVRENAVTVICSLAESG 222
Query: 494 HHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
+ L+ N L L+ L+ G I K+ AV +L+ +S + ++ G VGPL++
Sbjct: 223 GCENWLISENALPSLIRLLESGSIVAKEKAVISLQRMSISSETSRSIVGHGGVGPLIE 280
Score = 67 (28.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 48/204 (23%), Positives = 92/204 (45%)
Query: 608 GPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQ-LCEHDNENVRANAV------ 660
GP ++ I +T +++ +S SA TL SA+P + Q L E V N +
Sbjct: 276 GPLIE--ICKTGDSVSQSASA----CTLKNISAVPEVRQNLAEEGIVKVMINILNCGILL 329
Query: 661 --KLFC--CL--VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVP 714
K + CL + +E + R + + ++TL+ + +E +A I + + V
Sbjct: 330 GSKEYAAECLQNLTSSNETLRRSVISENGIQTLLAYLDGPLPQESGVAA--IRNLVGSVS 387
Query: 715 QFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGV 774
T + + +P +++ LK+G + A + R T+ E ++ E+G
Sbjct: 388 VETYFKI----IPSLVHVLKSGS------IGAQQAAASTICRIA--TSNETKRMIGESGC 435
Query: 775 IPKLVQLLEYGTTLTKEHAATSLA 798
IP L+++LE + +E AA ++A
Sbjct: 436 IPLLIRMLEAKASGAREVAAQAIA 459
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 968 943 0.00093 122 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 93
No. of states in DFA: 622 (66 KB)
Total size of DFA: 397 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 86.21u 0.10s 86.31t Elapsed: 00:00:04
Total cpu time: 86.24u 0.10s 86.34t Elapsed: 00:00:04
Start: Fri May 10 12:08:28 2013 End: Fri May 10 12:08:32 2013