BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002091
(968 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 226/784 (28%), Positives = 374/784 (47%), Gaps = 82/784 (10%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFS----DGNNL-CPLTMTVLDTSILRPN 318
++F CP+T+ VM +PV +GQTFER AIEKWF +G L CP+T L + L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 319 KTLRQSIEEWKDRNTMITIASMKPKLVSTEVE-EVLHCLEQLQDLC------QQRDQHRE 371
LR +IEEW+ RN + + + L E +L L+ ++++C +QR + +
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQ 146
Query: 372 WERL-----------------------ANGD----------DAVESIVRSLGRRIEE-RK 397
RL GD D V +IV+ L + + R+
Sbjct: 147 LVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGRE 206
Query: 398 LAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS--RDAQELLENLSFSDDNV 455
AV++L ELS L ++IG + G I+LLV + SS S A + L NL S++NV
Sbjct: 207 AAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEENV 266
Query: 456 VQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRG 515
QMA + LL +L G K+ MA L + L + K ++ V L+ L+
Sbjct: 267 RQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKV-IVAQTVGSSLIDLMRTR 325
Query: 516 DIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLA 575
D+ ++ A+ AL N+SS + +I G + PL+ L + + +R + +A +
Sbjct: 326 DMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSATILAN 385
Query: 576 VSTMYQESSQTPV----TLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP-SAGN 630
+ + + + PV L S++ + L L + TGP +Q ++L L P S N
Sbjct: 386 IVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVIN 445
Query: 631 IKTTLTQCSAIPVLVQLCE-HDNENVRANAVKLFCCLVDDGDEAI---IREHVGQKCLET 686
+ + + +AI LVQ E H+N+++R ++KL + E + +R VGQ L +
Sbjct: 446 VVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVGQ--LGS 503
Query: 687 LVTIIQSSHN--EEEIASAMGILSKLPEVP-QFTQWLLDAGALPIVLNFLKNGRQNDPN- 742
LV+II + EE A+A G+L++LPE T LL GA +++ + RQ +
Sbjct: 504 LVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGEIRG 563
Query: 743 -RFQ--VVENAVGALRRFTAPTNLEWQKR--AAEAGVIPKLVQLLEYGTTLTKEHA-ATS 796
RF+ +E V L R T E E + + LL+ + + A AT+
Sbjct: 564 IRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQRASATA 623
Query: 797 LARFSKNSLGLSR----PIPKR--KGFWCFSPPPEI--GCQVHGGLCGIESSFCLLEANA 848
L S S L++ P P F C S PP + C++H G+C + SFCL+E A
Sbjct: 624 LENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRESFCLVEGQA 683
Query: 849 VRPLVRVLEDPDHGACEASLDALVTLIE-GERLQNGSKVLEDANAIDRMVR-FLSSPSPK 906
V LV +L+ + +L AL TL+E G + G +++++A+ I ++ L + +
Sbjct: 684 VDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRTEN 743
Query: 907 LQEKALDSVERIFRLPEFKQKYG--KSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQ 964
L+ +A+ VERI R+ E ++ G ++ LVD Q + + ++ + L H++ + +
Sbjct: 744 LRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIPNF 803
Query: 965 SSYF 968
S F
Sbjct: 804 SGIF 807
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 216/778 (27%), Positives = 364/778 (46%), Gaps = 78/778 (10%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNL-----CPLTMTVLDTSILRPN 318
++F CP+T++VM DPV +G+TFER AIEKWF + + CPLT L ++ + +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 319 KTLRQSIEEWKDRNTMITIASMKPKLVSTEVE-EVLHCLEQLQDLCQQRDQHREWER--- 374
LR +IEEW+ RN + + L E ++L L ++ +C+ +R R
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 375 --------------------------LANGDDAVESIV------RSLGRRIEE-----RK 397
+ GDD ++IV R+L + + R+
Sbjct: 145 LIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGRE 204
Query: 398 LAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQAS--RDAQELLENLSFSDDNV 455
AV+LL ELS L ++IG + G ++LLV + SS+ S A LEN+ S++ V
Sbjct: 205 AAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEEIV 264
Query: 456 VQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRG 515
QMA + LL +L G K+ MA+ L E+ L + K L+ V L+ L+ G
Sbjct: 265 RQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKV-LVAQTVGSSLVDLMRSG 323
Query: 516 DIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLR-EETATAIMHL 574
D+ ++ A+KAL +SS + +I +G + PL+ L + ++ +R +E + I+
Sbjct: 324 DMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATILAN 383
Query: 575 AVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSP-SAGNIKT 633
V+ Y T L S+ + L LI+ TGP +Q ++L+ L P + +
Sbjct: 384 IVNIGYDFDKAT----LVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVY 439
Query: 634 TLTQCSAIPVLVQLCE-HDNENVRANAVKLFCCLVDDGDEAIIREHVGQKC-LETLVTII 691
+ AI LVQ E +N+++R ++KL L E + + G L +LV II
Sbjct: 440 AIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAII 499
Query: 692 --QSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVEN 749
++ EE+ A+A + TQ +L+ GA +++ + RQ D + V
Sbjct: 500 SEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNP 559
Query: 750 AVGALRRFTAPTNLEWQKRAA------EAGVIPKLVQLLEY-GTTLTKEHAATSLARFSK 802
+ L R A + K A E V + LL+ G + +A +L S
Sbjct: 560 FLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSL 619
Query: 803 NSLGLSR---PIPKRKG---FWCFSPPPEIG--CQVHGGLCGIESSFCLLEANAVRPLVR 854
S+ L+R P P F C P + C++H G+C + +FCL+E AV LV
Sbjct: 620 ESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVA 679
Query: 855 VLEDPDHGACEASLDALVTLIE-GERLQNGSKVLEDANAIDRMVRFL-SSPSPKLQEKAL 912
+L+ + EA+L AL +L+E G ++ G K+L++A+ I ++ L + + +L +A+
Sbjct: 680 LLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAV 739
Query: 913 DSVERIFRLPEFKQKYG--KSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 968
VERI R+ + ++ +S LVD Q + + ++ L H++ + + SS F
Sbjct: 740 WMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIF 797
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 215/895 (24%), Positives = 391/895 (43%), Gaps = 130/895 (14%)
Query: 176 RSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA 235
R + NH +++ + TE + + S+ ++ + K Q+++ ++ I + ++
Sbjct: 166 RKHGNH-----SESQSLVTEIPDIPSQSTNVSSQRKHGNLSKSQSQSTEIPDIPS---QS 217
Query: 236 DAASSPREKEMKYFSKRKSLGSQP-----LEP-LQSFYCPITRDVMVDPVETSSGQTFER 289
ASS R KY + +SL P +EP Q+F CP+T+++M DPV T +G T ER
Sbjct: 218 SNASSQR----KYGNLSESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCER 273
Query: 290 SAIEKWFSDGNNL----CPLTMTVLDTSILRPNKTLRQSIEEWKDRN--TMITIASMKPK 343
A+ +WF N CP+T L T L N L+ I+EWK RN I +A
Sbjct: 274 QAVIEWFDSFGNSDEINCPVTGQKLTTE-LSANVVLKTIIQEWKVRNEAARIKVAHAALS 332
Query: 344 LVSTEVEEVLHCLEQLQDLCQQRDQHREWERLAN-------------------------- 377
L +E V+ L LQ C+ ++ ++ R A
Sbjct: 333 LGGSE-SMVIDALRDLQMTCEGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRT 391
Query: 378 -----GDDAVESIVRS---------LGRRIEE-RKLAVALLLELSTCNTLRDQIGDVQGC 422
DD E IV++ LG + R A ALLLELS ++IG +G
Sbjct: 392 LADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAAQALLLELSKSQHACEKIGTARGA 451
Query: 423 ILLLVTMASSD--DNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKM 480
IL+LVT + D+ AS + ++L NL +N+ QMA++ + LL L+ G E ++
Sbjct: 452 ILMLVTAKYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQV 511
Query: 481 RMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQM 540
MA L E+++ H K + + L+ LV +I ++ A KAL ++S N +
Sbjct: 512 AMAAYLVEIDI-GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKIL 570
Query: 541 IKEGAVGPLVDLLLHHSSSSSSL--REETATAIMHLAVSTMYQESSQ--TPVTLLESDKE 596
++ G + +V+ + S + R E AT + ++ S + E+ + T L SD
Sbjct: 571 VEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYF 630
Query: 597 IFMLFSLINLTGP-NVQQRILQTFNALCRSPSA-GNIKTTLTQCSAIPVLVQLCEHDNEN 654
++ + ++ + P ++ +++ +L +SP A I + + + A +++L + ++
Sbjct: 631 VYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDE 690
Query: 655 VRANAVKLFCCLVDDGDEAIIREHVGQKCLETLVTI-----------IQSSHNEEEIASA 703
+ A+KL L ++G E L ++++ E+ A +
Sbjct: 691 LGVGALKLLIALTP---------YIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVS 741
Query: 704 MGILSKLPEVP-QFTQWLLDAGALPIVLNFL----KNGRQNDPNRFQVVENAVGALRRFT 758
+L+KLP L++ + +L+ + ++G + +E VG L RFT
Sbjct: 742 AKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFT 801
Query: 759 A----PTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKR 814
P + + V L L++ + + +AT L S ++ LSRP R
Sbjct: 802 TTLYEPQMMYLARNHDLTSVFVDL--LMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPR 859
Query: 815 --KGFWCFSPPPEIG-----------CQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDH 861
K S P C +H G+C +++FCL+EANA+ L+ L+
Sbjct: 860 STKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKV 919
Query: 862 GACEASLDALVTLIEGE-RLQNGSKVLEDANAIDRMVRFLSSPSPK-LQEKALDSVER-I 918
E++L A+ TL++ + ++ +L + NA+ ++ + + L +KA +++ I
Sbjct: 920 EVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFI 979
Query: 919 FR-----LPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF 968
R E Q S LV RG+ + + ++ +L L+ + S+Y
Sbjct: 980 IRGGDKYASEISQDRMLSGM--LVSAFHRGDGNTRQMAENILRRLDKMPSFSTYI 1032
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/561 (25%), Positives = 259/561 (46%), Gaps = 52/561 (9%)
Query: 15 ASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSA 74
A+++L +V I I+ + +KK + LA L+ +VP+ +E+ + + SE
Sbjct: 8 AAQSLIDVVNEI--AAISDYRITVKKLCYN-LARRLKLLVPMFEEIRESNEPISEDTLKT 64
Query: 75 IEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLST 134
+ L + AK+ CS+ +K+YL+M + +L + + ++ Q+L +P LD+S
Sbjct: 65 LMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISD 124
Query: 135 DIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGIST 194
++ E++E V +RA+ R ++++E+ E ++S + ++ D +L +A + +
Sbjct: 125 EVREQVELVLSQFRRAKGRVDVSDDELYEDLQS-LCNKSSDVDAYQPVLERVAKKLHL-M 182
Query: 195 ERSALKKEFDEFKSEIENSRMRKDQAEAV-QMDQIIALLERADAASSPREKEMKYFSKRK 253
E L +E + +S D E + +M ++ +++ +E K +
Sbjct: 183 EIPDLAQESVALHEMVASS--GGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR 240
Query: 254 SLGSQ--------PLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPL 305
S G P+ P F CPI+ ++M DPV SSGQT+ER+ IEKW G++ CP
Sbjct: 241 SNGQTSTAASQKIPVIP-DDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPK 299
Query: 306 TMTVLDTSILRPNKTLRQSIEEWKDRNTM---ITIASMKPKLVSTEVEEVLHCLEQLQDL 362
T L ++ L PN LR I +W + N + +S++P+ VS+ +++DL
Sbjct: 300 TQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEA--NKIEDL 357
Query: 363 CQQRDQHREWERLANGDD----AVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGD 418
W RLA G+ + +R L +R + ++A+A
Sbjct: 358 M--------W-RLAYGNPEDQRSAAGEIRLLAKRNADNRVAIA----------------- 391
Query: 419 VQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESV 478
G I LLV + S+ D++ + L NLS ++N + A ++Q L G
Sbjct: 392 EAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEA 451
Query: 479 KMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGL 538
+ A TL + + D +K ++ + PL+ L++ G + KK A AL NL N
Sbjct: 452 RENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKG 511
Query: 539 QMIKEGAVGPLVDLLLHHSSS 559
+ I+ G + L LL S
Sbjct: 512 KAIRAGVIPTLTRLLTEPGSG 532
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 45/267 (16%)
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRA-AEAGVIPKL 778
+ +AGA+P+++ L P+ ++ E++V AL + N K A AG IP +
Sbjct: 390 IAEAGAIPLLVGLLST-----PDS-RIQEHSVTALLNLSICEN---NKGAIVSAGAIPGI 440
Query: 779 VQLLEYGTTLTKEHAATSLARFS-----KNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGG 833
VQ+L+ G+ +E+AA +L S K ++G I PP + G
Sbjct: 441 VQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAI-----------PPLVVLLNEGT 489
Query: 834 LCGIESS------FCLLEAN---AVRP-----LVRVLEDPDHGACEASLDALVTLIEGER 879
G + + C+ + N A+R L R+L +P G + +L L L
Sbjct: 490 QRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAIL---SS 546
Query: 880 LQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFRL-PEFKQKYGKSAQM-PLV 937
G ++ ++A+ +V F+ + SP+ +E A + + P+ + K M PL+
Sbjct: 547 HPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLI 606
Query: 938 DLTQRGNSSMKSLSARVLAHLNVLQDQ 964
DL G K +A++L ++ L +Q
Sbjct: 607 DLAGNGTDRGKRKAAQLLERISRLAEQ 633
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Query: 381 AVESIVRSLGR-RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASR 439
A+ IV+ L + +E R+ A A L LS + + IG + G I LV + + + +
Sbjct: 436 AIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQRGKK 494
Query: 440 DAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASL 499
DA L NL N + +A L + L+ + LA + KA +
Sbjct: 495 DAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAII 554
Query: 500 LEGNVLGPLLHLVSRGDIQMKKVAVKALRNL-SSVPQNGLQMIKEGAVGPLVDL 552
+ + L+ + G + ++ A L +L S PQ+ ++ K G +GPL+DL
Sbjct: 555 GSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDL 608
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 224/523 (42%), Gaps = 62/523 (11%)
Query: 39 KKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKV 98
+KE F L L+ ++P L E+ + S + L + AK+L CS +K+
Sbjct: 75 QKECFN-LVRRLKILIPFLDEIRGFE---SPSCKHFLNRLRKVFLAAKKLLETCSNGSKI 130
Query: 99 YLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAE 158
Y+ ++ ++ R ++++ L P L +S D +EI+ +C +++A+ R +
Sbjct: 131 YMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQD 190
Query: 159 EEI---LEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEF---DEFKSE--- 209
E+ + V S RN D + ER A K E D+ K+E
Sbjct: 191 IELAVDMMVVFSKTDPRNADSAI---------------IERLAKKLELQTIDDLKTETIA 235
Query: 210 IENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKY---FSKRKSLGSQPLEPLQSF 266
I++ K II LL + ++ Y +K + + + P F
Sbjct: 236 IQSLIQDKGGLNIETKQHIIELLNKFKKLQGLEATDILYQPVINKAITKSTSLILP-HEF 294
Query: 267 YCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIE 326
CPIT ++M+DPV ++GQT+E+ +I+KWF G+ CP T LD L PN L+ I
Sbjct: 295 LCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIM 354
Query: 327 EWKDRNTM-ITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESI 385
+W ++N I + P + + +EV +E L Q +Q R +++
Sbjct: 355 QWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSS-SQLEEQRRSVKQM---------- 403
Query: 386 VRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELL 445
R L R E ++ +A G I LLV + S D+ +A L
Sbjct: 404 -RLLARENPENRVLIA-----------------NAGAIPLLVQLLSYPDSGIQENAVTTL 445
Query: 446 ENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVL 505
NLS + N ++ ++++ L G + A L + + D +K ++ N +
Sbjct: 446 LNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGI 505
Query: 506 GPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGP 548
PL+ L+ G ++ KK A+ AL NLS N + I G V P
Sbjct: 506 PPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQP 548
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 756 RFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFS 801
R A N E + A AG IP LVQLL Y + +E+A T+L S
Sbjct: 404 RLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLS 449
Score = 33.1 bits (74), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 89/231 (38%), Gaps = 56/231 (24%)
Query: 582 ESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAI 641
E +P + E E+ +L ++ + Q+R ++ L R + + AI
Sbjct: 366 EKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPEN--RVLIANAGAI 423
Query: 642 PVLVQLCEHDNENVRANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTIIQSSHNEEEI 700
P+LVQL + + ++ NAV L +D+ ++ +I + + ++ I+++ + E
Sbjct: 424 PLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLIS---NEGAIPNIIEILENGNREARE 480
Query: 701 ASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAP 760
SA + F+ +LD + I L+ NG
Sbjct: 481 NSAAAL---------FSLSMLDENKVTIGLS---NG------------------------ 504
Query: 761 TNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRPI 811
IP LV LL++GT K+ A T+L S NS R I
Sbjct: 505 --------------IPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAI 541
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/559 (25%), Positives = 255/559 (45%), Gaps = 67/559 (11%)
Query: 22 IVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNRE 81
++++I E+ S++V K+ L+ L ++P+L+E+ S SE +N+ + + +
Sbjct: 13 LIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQESSSEVVNALLSV-KQS 71
Query: 82 IKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIE 141
+ AK+L + S +K+YL++ ++ + + + QAL I+P +L++S ++ E++E
Sbjct: 72 LLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVE 131
Query: 142 KVCDNMQRAEFRAA--IAEEEILEKVES------GIQERNVDRSYANHL-LSLIADAVGI 192
V ++R+ + + ++E+ + V S + E ++ R A L L I D +
Sbjct: 132 LVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITD---L 188
Query: 193 STERSALKKEFDEFKSEIENSRMRKDQAEAVQ-MDQIIALLERADAASSPREKEMKY--- 248
+ E AL ++ +S D E+ + M ++ ++ +P +
Sbjct: 189 TQESLALL--------DMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLK 240
Query: 249 --FSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
K + L P + F CPI+ ++M DPV SSGQT+ER I+KW G+ CP T
Sbjct: 241 SSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKT 300
Query: 307 MTVLDTSILRPNKTLRQSIEEWKDRNTM-------ITIASMKPKLVSTEVEEVLHCLEQL 359
L + I+ PN LR I +W + N + I+ S K S+ ++ + +E+L
Sbjct: 301 QETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEEL 360
Query: 360 QDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDV 419
L + Q E R A G+ +R L ++ ++A+A
Sbjct: 361 --LLKLTSQQPEDRRSAAGE------IRLLAKQNNHNRVAIA-----------------A 395
Query: 420 QGCILLLVTMAS-SDDNQASRDAQELLENLSFSDDN----VVQMAKANYFKHLLQRLSAG 474
G I LLV + + S+D++ A + NLS +N V H+LQ+ G
Sbjct: 396 SGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQK---G 452
Query: 475 PESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVP 534
+ A TL + + D +K ++ + PL+ L+S G + KK A AL NL
Sbjct: 453 SMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQ 512
Query: 535 QNGLQMIKEGAVGPLVDLL 553
N + ++ G V L+ LL
Sbjct: 513 GNKGKAVRAGLVPVLMRLL 531
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 60/289 (20%)
Query: 684 LETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNR 743
L L+TI S +E +++ LS E + + +GA+P +++ L+ G
Sbjct: 402 LVNLLTISNDSRTQEHAVTSILNLSICQE--NKGKIVYSSGAVPGIVHVLQKGS------ 453
Query: 744 FQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLAR---F 800
+ ENA L F+ E + AG IP LV LL G+ K+ AAT+L F
Sbjct: 454 MEARENAAATL--FSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIF 511
Query: 801 SKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPD 860
N G V GL + L+R+L +P+
Sbjct: 512 QGNK----------------------GKAVRAGLVPV--------------LMRLLTEPE 535
Query: 861 HGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFR 920
G + SL L L +G + A+A+ +V F+ S SP+ +E +S +
Sbjct: 536 SGMVDESLSILAIL---SSHPDGKSEVGAADAVPVLVDFIRSGSPRNKE---NSAAVLVH 589
Query: 921 LPEFKQKYGKSAQM-----PLVDLTQRGNSSMKSLSARVLAHLNVLQDQ 964
L + Q++ AQ L+++ + G K +A++L + DQ
Sbjct: 590 LCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQ 638
Score = 40.8 bits (94), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 723 AGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLL 782
+GA+P+++N L ND +R Q E+AV ++ + K +G +P +V +L
Sbjct: 396 SGAIPLLVNLLT--ISND-SRTQ--EHAVTSILNLSI-CQENKGKIVYSSGAVPGIVHVL 449
Query: 783 EYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFC 842
+ G+ +E+AA +L FS + + E+
Sbjct: 450 QKGSMEARENAAATL--FSLSVID-------------------------------ENKVT 476
Query: 843 LLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSS 902
+ A A+ PLV +L + G+ DA L Q A + ++R L+
Sbjct: 477 IGAAGAIPPLVTLLSE---GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTE 533
Query: 903 PSPKLQEKALDSVERIFRLPEFKQKYGKSAQMP-LVDLTQRGNSSMKSLSARVLAHL 958
P + +++L + + P+ K + G + +P LVD + G+ K SA VL HL
Sbjct: 534 PESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHL 590
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 209/484 (43%), Gaps = 52/484 (10%)
Query: 82 IKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIE 141
+ A++L + +K+ M A + R+I AL LP + + ++ E++
Sbjct: 56 LGAARDLLRKTRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVA 115
Query: 142 KVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
V QRA R + ++ + + + D + LL+ I+ + + T + +K
Sbjct: 116 LVHSQFQRASTRTDPPDTQLSMDLAWALTDNPSDPA----LLTRISHKLQLHT-MADMKN 170
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIALLER----------ADAASSPREKEMKYFSK 251
E + + ++ D +DQ+ +LL++ A+ A + R +K+ S
Sbjct: 171 ESIALHNMVISTAGEPDGC----VDQMSSLLKKLKDCVVTEDHANDALTTRSASIKHRS- 225
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLD 311
P+ P F CPI+ ++M DPV SSGQT+ERS I+KW G+ CP T L
Sbjct: 226 -------PIIP-DEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLS 277
Query: 312 TSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQ-RDQHR 370
+ L PN L+ I +W + N + + + + + L L + R ++
Sbjct: 278 HTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQ 337
Query: 371 EWERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMA 430
+ +R A G+ +R L +R ++ +A G I LLV +
Sbjct: 338 DEQRAAAGE------IRLLAKRNVNNRICIA-----------------EAGAIPLLVNLL 374
Query: 431 SSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEME 490
SS D + A L NLS ++N + ++ +++ L G + A TL +
Sbjct: 375 SSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLS 434
Query: 491 LTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
+ D +K ++ + PL++L+ G + KK A A+ NL N ++ +K G V L+
Sbjct: 435 VVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLM 494
Query: 551 DLLL 554
+ L+
Sbjct: 495 NFLV 498
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 33/207 (15%)
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 779
+ +AGA+P+++N L + +DP R Q E+AV AL + N + ++ IPK+V
Sbjct: 361 IAEAGAIPLLVNLLSS---SDP-RTQ--EHAVTALLNLSIHEN--NKASIVDSHAIPKIV 412
Query: 780 QLLEYGTTLTKEHAATSLARFS-----KNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGL 834
++L+ G+ T+E+AA +L S K ++G + IP C P G
Sbjct: 413 EVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSP-------RGKK 465
Query: 835 CGIESSF--CLLEANAVRP--------LVRVLEDPDHGACEASLDALVTLIEGERLQNGS 884
+ F C+ + N VR L+ L DP G + +L +L++++ G G
Sbjct: 466 DAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEAL-SLLSILAGN--PEGK 522
Query: 885 KVLEDANAIDRMVRFLSSPSPKLQEKA 911
V+ + I +V + + SP+ +E A
Sbjct: 523 IVIARSEPIPPLVEVIKTGSPRNRENA 549
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 722 DAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQL 781
D L ++N L++G Q++ + A R A N+ + AEAG IP LV L
Sbjct: 321 DHAGLVSLMNRLRSGNQDE-------QRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNL 373
Query: 782 LEYGTTLTKEHAATSLARFS-----KNSLGLSRPIPK-----RKGFWCFSPPPEIGCQVH 831
L T+EHA T+L S K S+ S IPK + G E
Sbjct: 374 LSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSM------ETRENAA 427
Query: 832 GGLCGI----ESSFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVL 887
L + E+ + A A+ PL+ +L D G+ DA T I + G+KV
Sbjct: 428 ATLFSLSVVDENKVTIGAAGAIPPLINLLCD---GSPRGKKDA-ATAIFNLCIYQGNKVR 483
Query: 888 E-DANAIDRMVRFLSSPSPKLQEKALDSVERIFRLPEFKQKYGKSAQM-PLVDLTQRGNS 945
A + ++ FL P+ + ++AL + + PE K +S + PLV++ + G+
Sbjct: 484 AVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSP 543
Query: 946 SMKSLSARVL 955
+ +A +L
Sbjct: 544 RNRENAAAIL 553
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 145/316 (45%), Gaps = 28/316 (8%)
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQ 323
+ F CPI+ ++M DP S+GQT+ERS I++W GN CP T L+ L PN LR
Sbjct: 245 EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRS 304
Query: 324 SIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWE-RLANGD-DA 381
I +W + H +EQ R ++ + R +GD A
Sbjct: 305 LISQWCTK----------------------HNIEQPGGYMNGRTKNSDGSFRDLSGDMSA 342
Query: 382 VESIVRSL-GRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSD-DNQASR 439
+ ++V L + IE+R+ AV+ + LS +T + G I +LV + +SD D +
Sbjct: 343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQE 402
Query: 440 DAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASL 499
+A + NLS + N + A ++ L AG + A TL + L D +K +
Sbjct: 403 NAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIII 462
Query: 500 LEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSS 559
+ L+ L+ G ++ KK A AL NL N + ++ G V PLV +L SS
Sbjct: 463 GASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTD--SS 520
Query: 560 SSSLREETATAIMHLA 575
S + +E T + LA
Sbjct: 521 SERMADEALTILSVLA 536
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 209/459 (45%), Gaps = 33/459 (7%)
Query: 96 NKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAA 155
+++ L++ +++K+ + ++ QAL +P LD+S ++ E++E V ++RA+ R
Sbjct: 108 SRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERID 167
Query: 156 IAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRM 215
+ ++E + S + ++N D S +L +++ + + T ++ E+ S
Sbjct: 168 MPDDEFYNDLLS-VYDKNYDPSAELAILGRLSEKLHLMTITDLTQESL--ALHEMVASGG 224
Query: 216 RKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGS----QPLEPLQSFYCPIT 271
+D E ++++ LL++ + +M + L S +P+ F CPI+
Sbjct: 225 GQDPGE--HIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPIS 282
Query: 272 RDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDR 331
++M DPV S+GQT+ER+ IEKW + G++ CP T + TS L PN LR I +W +
Sbjct: 283 LELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCET 342
Query: 332 NTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGR 391
N M+P ST+ + C ++ AN D + +
Sbjct: 343 N------GMEPPKRSTQPNKPTPA-------CSSSER-------ANIDALLSKLCSP--- 379
Query: 392 RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS 451
EE++ A A L L+ N G I LL+++ SS D + A L NLS
Sbjct: 380 DTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIH 439
Query: 452 DDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHL 511
+DN + + ++ L G + A TL + + D +K ++ + L+ L
Sbjct: 440 EDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVL 499
Query: 512 VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
+ G + KK A AL NL N + I+ G V PL+
Sbjct: 500 LGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLV-PLI 537
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 779
++ +GA+P +++ LKNG + ENA L F+ E++ G IP LV
Sbjct: 446 IISSGAVPSIVHVLKNG------SMEARENAAATL--FSLSVIDEYKVTIGGMGAIPALV 497
Query: 780 QLLEYGTTLTKEHAATSL 797
LL G+ K+ AA +L
Sbjct: 498 VLLGEGSQRGKKDAAAAL 515
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 209/459 (45%), Gaps = 33/459 (7%)
Query: 96 NKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAA 155
+++ L++ +++K+ + ++ QAL +P LD+S ++ E++E V ++RA+ R
Sbjct: 108 SRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERID 167
Query: 156 IAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRM 215
+ ++E + S + ++N D S +L +++ + + T ++ E+ S
Sbjct: 168 MPDDEFYNDLLS-VYDKNYDPSAELAILGRLSEKLHLMTITDLTQESL--ALHEMVASGG 224
Query: 216 RKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGS----QPLEPLQSFYCPIT 271
+D E ++++ LL++ + +M + L S +P+ F CPI+
Sbjct: 225 GQDPGE--HIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPIS 282
Query: 272 RDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDR 331
++M DPV S+GQT+ER+ IEKW + G++ CP T + TS L PN LR I +W +
Sbjct: 283 LELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCET 342
Query: 332 NTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGR 391
N M+P ST+ + C ++ AN D + +
Sbjct: 343 N------GMEPPKRSTQPNKPTPA-------CSSSER-------ANIDALLSKLCSP--- 379
Query: 392 RIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFS 451
EE++ A A L L+ N G I LL+++ SS D + A L NLS
Sbjct: 380 DTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIH 439
Query: 452 DDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHL 511
+DN + + ++ L G + A TL + + D +K ++ + L+ L
Sbjct: 440 EDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVL 499
Query: 512 VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLV 550
+ G + KK A AL NL N + I+ G V PL+
Sbjct: 500 LGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLV-PLI 537
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 779
++ +GA+P +++ LKNG + ENA L F+ E++ G IP LV
Sbjct: 446 IISSGAVPSIVHVLKNG------SMEARENAAATL--FSLSVIDEYKVTIGGMGAIPALV 497
Query: 780 QLLEYGTTLTKEHAATSL 797
LL G+ K+ AA +L
Sbjct: 498 VLLGEGSQRGKKDAAAAL 515
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 154/653 (23%), Positives = 270/653 (41%), Gaps = 117/653 (17%)
Query: 46 LAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCR 105
L+ + E ++ V EL K ++ E + A++ + EL + +K++ L +
Sbjct: 47 LSPFFEELIDVNVELKKDQITGFEAMRIALD-------SSLELFRSVNGGSKLFQLFDRD 99
Query: 106 AIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFR-----------A 154
++V++ +D EI AL +P +++S ++ E+++ + +RA+ R
Sbjct: 100 SLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDL 159
Query: 155 AIAEEE------ILEKVESGIQERNVDR----SYANH--LLSLIADAVGISTERSALKKE 202
A+AE IL+++ +Q +D S+A H LS D S+L K
Sbjct: 160 AMAENVMDPDPIILKRLSQELQLTTIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKN 219
Query: 203 FDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEP 262
+F + +E +D S + S+ +S P+ P
Sbjct: 220 LVDFVT-----------------------MESSDPDPSTGSR---IVSRHRS----PVIP 249
Query: 263 LQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLR 322
+ F CPI+ ++M DPV S+GQT+ERS+I+KW G+ CP + L + L PN L+
Sbjct: 250 -EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 323 QSIEEWKDRNTMITIASMKPKLVSTEVEE----------VLHCLEQLQDLCQQRDQHREW 372
I W + N I + + +T++ VL LE+L + E
Sbjct: 309 SLIALWCESNG-IELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLA------NGTTEQ 361
Query: 373 ERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASS 432
+R A G+ +R L +R + ++ +A G I LLV + SS
Sbjct: 362 QRAAAGE------LRLLAKRNVDNRVCIA-----------------EAGAIPLLVELLSS 398
Query: 433 DDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELT 492
D + + L NLS ++ N + A +++ L G + A TL + +
Sbjct: 399 PDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVI 458
Query: 493 DHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDL 552
D +K ++ + L+ L+ G + KK A A+ NL N + +K G V PL L
Sbjct: 459 DENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRL 518
Query: 553 LLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQ 612
L + + +E A+ LA+ + QE +T + ES I +L +I P +
Sbjct: 519 L---KDAGGGMVDE---ALAILAILSTNQE-GKTAIAEAES---IPVLVEIIRTGSPRNR 568
Query: 613 QRILQTFNALCRSPSAGNIK--TTLTQCSAIPVLVQLCEHDNENVRANAVKLF 663
+ LC GNI+ + A L +L E+ + + A L
Sbjct: 569 ENAAAILWYLC----IGNIERLNVAREVGADVALKELTENGTDRAKRKAASLL 617
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 720 LLDAGALPIVLNFLKNGRQNDPNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLV 779
++DAGA+ ++ LKNG + ENA L F+ E + AG I L+
Sbjct: 424 IVDAGAITDIVEVLKNGS------MEARENAAATL--FSLSVIDENKVAIGAAGAIQALI 475
Query: 780 QLLEYGTTLTKEHAATSLARFSKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIES 839
LLE GT K+ AAT++ SR V GG+
Sbjct: 476 SLLEEGTRRGKKDAATAIFNLCIYQGNKSRA-------------------VKGGI----- 511
Query: 840 SFCLLEANAVRPLVRVLEDPDHGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRF 899
V PL R+L+D G + +L L L Q G + +A +I +V
Sbjct: 512 ---------VDPLTRLLKDAGGGMVDEALAILAILSTN---QEGKTAIAEAESIPVLVEI 559
Query: 900 LSSPSPKLQEKA--------LDSVERIFRLPEFKQKYGKSAQMPLVDLTQRGNSSMKSLS 951
+ + SP+ +E A + ++ER+ E A + L +LT+ G K +
Sbjct: 560 IRTGSPRNRENAAAILWYLCIGNIERLNVAREV------GADVALKELTENGTDRAKRKA 613
Query: 952 ARVL 955
A +L
Sbjct: 614 ASLL 617
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 750 AVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKN 803
A G LR A N++ + AEAG IP LV+LL T+EH+ T+L S N
Sbjct: 365 AAGELR-LLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSIN 417
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CP++ ++M DPV ++GQT+ER+ I++W GN CP T L+ L PN LR I
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLI 304
Query: 326 EEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDAVESI 385
W H +EQ R ++ +GD S+
Sbjct: 305 SRWCAE----------------------HNIEQPAGYINGRTKN-------SGD---MSV 332
Query: 386 VRSLGRRI-----EERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRD 440
+R+L +R+ E+R+ AV+ + LS +T + G I +LV + +S+D +
Sbjct: 333 IRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQEN 392
Query: 441 AQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLL 500
A + NLS ++N + A ++Q L AG + A TL + L D +K +
Sbjct: 393 AITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIG 452
Query: 501 EGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLL 553
+ L+ L+ G + KK A AL NL N + ++ G V LV +L
Sbjct: 453 GSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKML 505
Score = 33.9 bits (76), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 42/263 (15%)
Query: 503 NVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKE-GAVGPLVDLLLHHSSSSS 561
+V+ L+ +S + ++ AV +R+LS + +I E GA+ LV+LL +S
Sbjct: 331 SVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL---TSEDV 387
Query: 562 SLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNA 621
+ +E T +++L++ E++KE+ M + ++ Q +L+
Sbjct: 388 ATQENAITCVLNLSI--------------YENNKELIMFAGAVT----SIVQ-VLRAGTM 428
Query: 622 LCRSPSAGNI---------KTTLTQCSAIPVLVQLCEHDNENVRANA-VKLFCCLVDDGD 671
R +A + K + AIP LV L E+ + +A LF + G+
Sbjct: 429 EARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGN 488
Query: 672 EAIIREHVGQKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLN 731
+ V + LV ++ S + A+ ILS L ++ A LP ++
Sbjct: 489 KG---RAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIG 545
Query: 732 FLKNGRQNDPNRFQVVENAVGAL 754
L Q D R + ENA L
Sbjct: 546 IL----QTDQTRNR--ENAAAIL 562
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/566 (22%), Positives = 246/566 (43%), Gaps = 80/566 (14%)
Query: 53 IVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKE-LTTECSKRNKVYLLMNCRAIVKRL 111
I PVL+ L D + SE LN+ E L + + +E + +++ ++ ++ +L
Sbjct: 48 IKPVLENLIDSDAAPSELLNNGFEELAQYVDELREQFQSWQPLSTRIFYVLRIESLASKL 107
Query: 112 KDTAREISQALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQE 171
++++ E+ Q +L L D+I + C E +A +EI ++ +++
Sbjct: 108 RESSLEVFQ---LLKHCEQHLPADLISPSFEEC-----IELVKLVARDEISYTIDQALKD 159
Query: 172 RNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIAL 231
+ + +L IA++ G+ + + L E + E++ + + EA +D +I+L
Sbjct: 160 QKKGVGPTSEVLVKIAESTGLRSNQEILV-EGVVLTNMKEDAELTDNDTEAEYLDGLISL 218
Query: 232 LERADAASSPREKEMKYFSKRKSLGSQ-PLEPLQSFYCPITRDVMVDPVETSSGQTFERS 290
+ +Y S K + P+ F C ++ ++M DPV +SGQTFER
Sbjct: 219 TTQMH----------EYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERV 268
Query: 291 AIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVE 350
I+KW G +CP T L + L PN +R + W + N + +
Sbjct: 269 FIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNVYPPDPL---------- 318
Query: 351 EVLHCLEQLQDLCQ------QRDQHRE----------WERLANGDDAVESIV-------- 386
E++H E L + + H E + R A+ V +V
Sbjct: 319 ELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSASAPGIVSEVVCKTKRNNN 378
Query: 387 ----RSLGRR------IEERK-----LAVALLLELSTCNTLRDQIGDVQGCILLLVTMAS 431
RSL R EER + A + E + +++ ++ L+ +S
Sbjct: 379 AAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSSIETEVKK-----LIDDLKSS 433
Query: 432 SDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMEL 491
S D Q A+ + + +D+ +V +A+ L+ L + E ++ T L + +
Sbjct: 434 SLDTQREATARIRILARNSTDNRIV-IARCEAIPSLVSLLYSTDERIQADAVTCLLNLSI 492
Query: 492 TDHHKASLLEGNVLGPLLHLVSRGDIQMKKV-AVKALRNLSSVPQNGLQMIKEGAVGPLV 550
D++K+ + E + PL+H++ G ++ K + L +LS + + ++ + GA+ PLV
Sbjct: 493 NDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLV 552
Query: 551 DLLLHHSSSSSSLREETATAIMHLAV 576
DLL S S S +++ ATA+ +L++
Sbjct: 553 DLL---GSGSLSGKKDAATALFNLSI 575
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 426 LVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP-ESVKMRMAT 484
LV++ S D + DA L NLS +D+N +A++ L+ L G E K A
Sbjct: 468 LVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAA 527
Query: 485 TLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEG 544
TL + + + +K + E + PL+ L+ G + KK A AL NLS +N ++I+ G
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAG 587
Query: 545 AVGPLVDLL 553
AV LV+L+
Sbjct: 588 AVRYLVELM 596
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 394 EERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDD 453
E + + A L LS + +IG+ G I LV + S +DA L NLS +
Sbjct: 520 EAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHE 578
Query: 454 NVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVS 513
N ++ +A ++L++ + V+ + LA + K ++ E + L+ +V
Sbjct: 579 NKTKVIEAGAVRYLVELMDPAFGMVE-KAVVVLANLATVREGKIAIGEEGGIPVLVEVVE 637
Query: 514 RGDIQMKKVAVKALRNL-SSVPQNGLQMIKEGAVGPLVDL 552
G + K+ A AL L + P+ +I+EG + PLV L
Sbjct: 638 LGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVAL 677
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 384 SIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQE 443
S++ S RI+ AV LL LS + + I + + L+ + + +A ++
Sbjct: 470 SLLYSTDERIQAD--AVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAA 527
Query: 444 LLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGN 503
L +LS ++ ++ +A + L+ L +G S K AT L + + +K ++E
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAG 587
Query: 504 VLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLL 553
+ L+ L+ M + AV L NL++V + + + +EG + LV+++
Sbjct: 588 AVRYLVELMDPA-FGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVV 636
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 126/330 (38%), Gaps = 92/330 (27%)
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCL-VDDGDEAIIREHVGQKCLETLVTI 690
+ + +C AIP LV L +E ++A+AV L ++D ++++I E + L+ +
Sbjct: 456 RIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAE---SGAIVPLIHV 512
Query: 691 IQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQVVENA 750
+++ + EE A++ L L V+E
Sbjct: 513 LKTGYLEEAKANSAATLFSL----------------------------------SVIE-- 536
Query: 751 VGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARFSKNSLGLSRP 810
E++ EAG I LV LL G+ K+ AAT+L S
Sbjct: 537 -------------EYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLS--------- 574
Query: 811 IPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPDHGACEASLDA 870
+H E+ ++EA AVR LV ++ DP G E A
Sbjct: 575 -------------------IHH-----ENKTKVIEAGAVRYLVELM-DPAFGMVE---KA 606
Query: 871 LVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERI-FRLPEFKQKYG 929
+V L ++ G + + I +V + S + +E A ++ ++ P+F
Sbjct: 607 VVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVI 666
Query: 930 KSAQM-PLVDLTQRGNSSMKSLSARVLAHL 958
+ + PLV LT+ G + K + +L +
Sbjct: 667 REGVIPPLVALTKSGTARGKEKAQNLLKYF 696
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 129/587 (21%), Positives = 246/587 (41%), Gaps = 64/587 (10%)
Query: 85 AKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVC 144
+K L C++ +K++LL+ +I D +EIS L +LP+ L LS DI E+IE +
Sbjct: 117 SKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQ 176
Query: 145 DNMQRAEFRAAIAEEEILEKVES---GIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
++A +E + E S G + + S L + +GI +S +
Sbjct: 177 RQSRKARLYIDKNDESLRESFYSFLDGFENGKIPSSV--DLRMFFVEKLGIRDSKSC-RS 233
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA---------DAA-----SSPREKEMK 247
E + + +I N + +V ++ +A+ D ++P++
Sbjct: 234 EIEFLEEQIVNHDGDLEPTGSV-INGFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKG 292
Query: 248 YFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTM 307
+ ++ +G + + F CPI+ D+M DPV S+GQT++R++I +W +G+ CP T
Sbjct: 293 FVAQE--IGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTG 350
Query: 308 TVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDL-CQQR 366
+L S + PN+ L+ I +W + + S + + + E L + +
Sbjct: 351 QMLMDSRIVPNRALKNLIVQWCTASGI----SYESEFTDSPNESFASALPTKAAVEANKA 406
Query: 367 DQHREWERLANGDDAVESI----VRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGC 422
+ LA+G A +++ +R L + +E + +A G
Sbjct: 407 TVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIA-----------------EAGA 449
Query: 423 ILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ-MAKANYFKHLLQRLSAG--PESVK 479
I L + +S++ A ++ + NLS + N + M + + + ++ L +G E+ +
Sbjct: 450 IPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQE 509
Query: 480 MRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQ 539
AT + + ++ K + + L L+ G + KK AV AL NLS+ P N +
Sbjct: 510 NAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSR 569
Query: 540 MIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFM 599
MI+ G V LV L + + + L + +E D +
Sbjct: 570 MIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKE-----------DSAVAG 618
Query: 600 LFSLINLTGPNVQQRILQTFNALCRSPSAGNIKTTLTQCSAIPVLVQ 646
L ++ P ++ + LCRS A + + + AI L+Q
Sbjct: 619 LMGMMRCGTPRGKENAVAALLELCRSGGAA-VAEKVLRAPAIAGLLQ 664
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 158/355 (44%), Gaps = 71/355 (20%)
Query: 205 EFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPL- 263
E K E++ ++ D + + + I L DA S+ RE M+ +K SL + LE +
Sbjct: 19 ELKREMKKLLIKIDDEDDLGVQTIDQL---QDALSALREATMRKMAKSSSL--EMLETVS 73
Query: 264 --QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTL 321
+ F CP++ ++M DPV +SGQT+++ I+KW S GN CP T VL + L PN +
Sbjct: 74 CPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLI 133
Query: 322 RQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERLANGDDA 381
R+ I +W +N + T + P LV+ +
Sbjct: 134 REMISKWCKKNGLETKSQYHPNLVNED--------------------------------- 160
Query: 382 VESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDA 441
E++ RS +R++ +LL ++S+ N L+DQ + LL +R
Sbjct: 161 -ETVTRS------DREIFNSLLCKVSSSN-LQDQKSAAKELRLL------------TRKG 200
Query: 442 QELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP-ESVKMRMATTLAEMELTDHHKASLL 500
E S D + ++ N H + P E ++ + TTL + + D L+
Sbjct: 201 TEFRALFGESPDEITRL--VNPLLH-----GSNPDEKLQEDVVTTLLNISIHDDSNKKLV 253
Query: 501 --EGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLL 553
NV+ L+ + RG + + A A+ LS++ N + + K G + PL+DLL
Sbjct: 254 CENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLL 308
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 14/247 (5%)
Query: 86 KELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTD---IIEEIEK 142
K L +CS+ +K++LL+ + + ++S L ILPL DLS D +I + K
Sbjct: 104 KSLIDDCSRVSKLWLLLQIDIVAFNFHELVTDLSTVLDILPLHDFDLSDDAQDLISLLTK 163
Query: 143 VC-DNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKK 201
C D++Q + R ++ + + + + D S L+ + D +G+S + ++L
Sbjct: 164 QCSDSVQFVDARDVALRRKVTDTIAGIKHQISPDHST---LIKIFND-LGLS-DSASLTD 218
Query: 202 EFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLE 261
E + EI++ + ++ A + I L+ + F + +SL +
Sbjct: 219 EIQRLEDEIQDQIDDRSKSAAASL---IGLVRYSKCVLYGPSTPAPDFRRHQSLSDANIP 275
Query: 262 PLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTL 321
F CPIT ++M DPV ++GQT++R +I+ W G+N CP T VL + L PN+ L
Sbjct: 276 --ADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 322 RQSIEEW 328
+ I W
Sbjct: 334 KNLIVLW 340
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 251/570 (44%), Gaps = 74/570 (12%)
Query: 85 AKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVC 144
A+ L + + + + L+ + +D E++ L +LP ASL LS D ++
Sbjct: 111 AELLVSYVASAGRAWALLRSPHLAASFRDLDAELAVVLDVLPAASLRLSHDATGLLD--- 167
Query: 145 DNMQRAEFRAAIAEEEILEKVESGIQERNVD--RSY-----ANH--LLSLIADAVGISTE 195
+ RA R A + + E+ ++ER +D R + +H L SL+AD +GIST
Sbjct: 168 --LLRAHCRCR-APAQYHDPDEAALRERLMDALRQFDLGQPPDHPSLQSLLAD-MGISTA 223
Query: 196 RSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERA-----DAASSPREKEMKYFS 250
S + E D + +I + +++ + + ++ALL D +++ ++
Sbjct: 224 ASC-RAEIDYLEEQILS---QEEDTDLPLVGSVLALLRYCLFAVFDPSNAKALRDWPLSG 279
Query: 251 KRKSLGS------QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCP 304
R+ L S + F CPI+ D+M DPV S+GQT++R +I +W +G++ CP
Sbjct: 280 NRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCP 339
Query: 305 LTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQ 364
+ L L PN+ LR I +W + + S E E + E + C
Sbjct: 340 NSGQTLADHRLVPNRALRSLISQWCGVYGL--------QYDSPESNEGMA--ECVAASCS 389
Query: 365 QRDQHREWERLANGDDAVESIVRSLGRRIE---ERKLAVA---LLLELSTCNTLRDQIGD 418
R +A ++ R L R +E E AVA + L T R I D
Sbjct: 390 SRAAM----------EANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIAD 439
Query: 419 VQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQ-MAKANYFKHLLQRLSAGPES 477
+ G I LL + S+D A +A L NLS + N + M + + ++ L G +
Sbjct: 440 L-GAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTT 498
Query: 478 -VKMRMATTLAEMELTDHHKASLL-EGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
K A TL + + + K ++ E + L ++++G + KK AV AL NLS+ P+
Sbjct: 499 EAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPE 558
Query: 536 NGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAIMHLAVSTMYQESSQTPVTLLESDK 595
+ +M++ AV L+ L + + S EE A A+ L M Q S V L+ S +
Sbjct: 559 SSARMLESCAVVALIQSLRNDTVS-----EEAAGALALL----MKQPSI---VHLVGSSE 606
Query: 596 EIFM-LFSLINLTGPNVQQRILQTFNALCR 624
+ L L+ P ++ + +CR
Sbjct: 607 TVITSLVGLMRRGTPKGKENAVSALYEICR 636
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 58/366 (15%)
Query: 23 VEAILEVMIASNNVLIKKESFKELAAYLER---IVPVLKELNKRDLSHSEGLNSAIEILN 79
V + E + A+++ + + KEL+A + I P L+E R S + L S L+
Sbjct: 3 VSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCS----LH 58
Query: 80 REIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQAL----GILPLASLDLSTD 135
++ AK + CS+ +K+YL + A++ + + + +L I+P + D
Sbjct: 59 IALEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILD 118
Query: 136 IIEEIEKVCDNMQRAEFRAAIAEEEILEKV----ESGIQERNVDRSYANHLLSLIADAVG 191
I+ E+E +F +E+E+ +++ + G + N S + A +
Sbjct: 119 IVGELE-------HTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLS 171
Query: 192 ISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLER----------------- 234
I++ RSAL E K I+ +R+ +D+ + + ++ L+ +
Sbjct: 172 ITSSRSALA-ERRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPC 230
Query: 235 ----ADAASSPREKEMKYF----SKRKSLGSQPLE---------PLQSFYCPITRDVMVD 277
+ P E + F SK S+ +P+ P + CPI+ +M D
Sbjct: 231 STPCSPTGQGPNEDRVNAFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYD 290
Query: 278 PVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITI 337
PV +SGQT+ER IEKWFSDG+N CP T L L PN ++ I W ++N IT+
Sbjct: 291 PVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNG-ITV 349
Query: 338 ASMKPK 343
+ P+
Sbjct: 350 PTGPPE 355
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 46/388 (11%)
Query: 86 KELTTECSKRN-KVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVC 144
K L +C++ K+Y+LMN + +D R IS +L P+ S+DL ++ E I V
Sbjct: 102 KFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDTFPVRSVDLPGEVNELIYLVM 161
Query: 145 DNMQRAEFRAAIAEEEILEKVE--SGIQERNVDRSYANHLLSLIADAVGISTERSALKKE 202
+++E R ++ ++ V + E ++ + ++ +L ++ D +G+ R +K E
Sbjct: 162 RQTRKSEARPDRDDKRAIDSVYWFFNLFENRINPN-SDEILRVL-DHIGVRKWRDCVK-E 218
Query: 203 FDEFKSEIENSRMRKDQAEAVQMDQIIA--------LLERADAASSPREKEMKYFSKRKS 254
D + EI S +K E + ++ +L D ++KE +S
Sbjct: 219 IDFLREEI--SVGKKSNIEIELLSNLMGFICYCRCVILRGIDVDDEEKDKEEDDLMMVRS 276
Query: 255 LGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSI 314
L L CPI+ ++M DPV SG T++RS+I KWF+ GN CP T L +++
Sbjct: 277 LNVDDLR------CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTV 330
Query: 315 LRPNKTLRQSIEEWKDRNTMITIASMKPK-----------------------LVSTEVEE 351
L N +++Q I+ + +N ++ K K L+ + EE
Sbjct: 331 LVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEE 390
Query: 352 VLHCLEQLQDLCQQRDQHREWERLANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNT 411
++ L +++ L + +R A +++ I+RS RI+E +A + L
Sbjct: 391 MVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGK 450
Query: 412 LRDQIGDVQGCILLLVTMASSDDNQASR 439
R +G+ G + L+V + + + SR
Sbjct: 451 TR-IVGEDGGGLRLIVEVLNDGARRESR 477
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 162/349 (46%), Gaps = 32/349 (9%)
Query: 9 SASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLS-- 66
S S V ++L Q+ IL S + K+SF+E ++ ++ V +E+ R +
Sbjct: 23 SISIVTLLDSLIQLAGDIL--TFKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSR 80
Query: 67 ---HSEGLNSAIEILNREIKGAKELTTECSKRN-KVYLLMNCRAIVKRLKDTAREISQAL 122
H S+++ ++ + K L +C++ ++ ++MN + L+ R IS +L
Sbjct: 81 RYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSL 140
Query: 123 GILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYAN-H 181
P+AS+DL+T++ E I+ V ++ + ++ + + I V+R +
Sbjct: 141 SAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINR-ILALFVNRVVPDPD 199
Query: 182 LLSLIADAVGISTERSALKKEFDEFKSEIENSRM---RKDQAEAVQMDQ----------- 227
++ I D VGI +K E + EI+ R+ +K ++ V++
Sbjct: 200 EINRILDHVGIRKWGDCVK-EINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRC 258
Query: 228 -IIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQT 286
I+ +ER D + + K + L ++ CPI+ ++M DPV +G T
Sbjct: 259 IILGRIERDDHHNHHEDGIKKDHDLIRGL------KVEDLLCPISLEIMTDPVVIETGHT 312
Query: 287 FERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMI 335
++RS+I KWF GN CP+T +L ++ L N ++RQ I + N ++
Sbjct: 313 YDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIV 361
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 158/340 (46%), Gaps = 40/340 (11%)
Query: 28 EVMIASNNVLIKKESFKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKE 87
E + A+++ + + KEL+ L +++ + L G+ A+ L+ ++ AK
Sbjct: 8 ENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQ-ALCSLHIALEKAKN 66
Query: 88 LTTECSKRNKVYLLMNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIEEIEKVCDNM 147
+ CS+ +K+YL + A++ LK +I+ G+ + + + + I +I ++ +
Sbjct: 67 ILQHCSECSKLYLAITGDAVL--LKFEKAKIALIDGLKRVEDI-VPSSIGSQILEIVGEL 123
Query: 148 QRAEFRAAIAEEEILEKVESGIQE-RNVDRSYANHLLSLI---ADAVGIST------ERS 197
+ F +E+E+ +++ + +Q+ + D N L + A + I++ ER
Sbjct: 124 ENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERR 183
Query: 198 ALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERAD----------AASSPREKEM- 246
ALKK D ++E E+ R A + + + + L R++ SP E
Sbjct: 184 ALKKLIDRARAE-EDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHGS 242
Query: 247 -----KYFSKRKSLGSQPLE---------PLQSFYCPITRDVMVDPVETSSGQTFERSAI 292
+ S+ SL +P+ P + CPI+ +M DPV +SGQT+ER I
Sbjct: 243 VHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCI 302
Query: 293 EKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRN 332
EKWFSDG+N CP T L L PN ++ I W ++N
Sbjct: 303 EKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQN 342
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 58/326 (17%)
Query: 53 IVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLK 112
I P L+ R S + L S +L + K + C++ +K+YL + ++V + +
Sbjct: 36 IFPSLEAARPRSKSGIQALCSLHVVLEK----VKNILRHCTESSKLYLAITGDSVVLKFE 91
Query: 113 DTAREISQALG-ILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQE 171
++ +L + + + + ++E + ++ EF AE+EI +++ +Q+
Sbjct: 92 KAKSSLTDSLRRVEDIVQQSIGSQLLE----ILMELENTEFSLDPAEKEIGDQIIGLLQQ 147
Query: 172 R-NVDRSYANHLLSLIADA---VGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQ 227
N + S N+ L + A +GI++ R+AL E K IE +RM D+ + +
Sbjct: 148 GGNFESSSDNNELEVFHQAATRLGITSSRAALT-ERRCLKKLIERARMEDDKRKESIVAY 206
Query: 228 IIALLERA-------------------------------DAASSPREKEMKYFS------ 250
++ L+ + DA ++++ S
Sbjct: 207 LLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRS 266
Query: 251 ----KRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
+R S S P E L+ CPI+ +M DPV +SGQT+ER IEKWFSDG+N CP T
Sbjct: 267 CNNNRRSSQMSVPPEELR---CPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKT 323
Query: 307 MTVLDTSILRPNKTLRQSIEEWKDRN 332
L L PN ++ I W ++N
Sbjct: 324 HQQLSHLCLTPNYCVKALISSWCEQN 349
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 30/295 (10%)
Query: 45 ELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNC 104
EL ++RI+ + ++ S G+ + + +L+ + K+L CS+ +K+Y+ +
Sbjct: 22 ELKRLVDRIMRIFPDIEDARPGCSSGIQT-LCLLHNALDKTKQLLQYCSESSKLYMAVTG 80
Query: 105 RAIVKRLKDTAREISQALG----ILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEE 160
AI+ R + + Q L I+P + I++++ ++ +E A A E
Sbjct: 81 DAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEEAGKAIRE 140
Query: 161 ILEKVESGIQERNVDRSYANHLLSL-IADAVGISTERSALKKEFDEFKSEIENSRMRKDQ 219
+++K S + + + L L ++ I TER +LK ++ K +NS
Sbjct: 141 LMQKSTSSSASPDEIKDFHYAALKLQLSTPEAIVTERRSLKIICEDHK---QNS------ 191
Query: 220 AEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPV 279
S + + + G+ P + F C ++R VM DPV
Sbjct: 192 -----------FTHHQSIDDSLHANAAEAEASEEHNGTLP----EKFKCTLSRTVMYDPV 236
Query: 280 ETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTM 334
SSG TFER I+KWF +GN+ CP++ LD L+PN L+ I EW +N +
Sbjct: 237 IISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKSQISEWCAKNGL 291
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 71 LNSAIEILNREIKGAKELTTECS-KRNKVYLLMNCRAIVKRLKDTAREISQALGILPLAS 129
L E L+ + A+E + S K +K++ + C ++ +++ + EIS+ L L L+
Sbjct: 62 LYKGCEDLDSVVNQAREFLEDWSPKLSKLFGVFQCEVLLGKVQTCSLEISRIL--LQLSQ 119
Query: 130 LDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVD-RSYANHLLSLIAD 188
T ++ +E+ E + E ++E +E+ ++ + D S N+ L I
Sbjct: 120 SSPVTSSVQSVERCVQ-----ETESFKQEGTLMELMENALRNQKDDITSLDNNHLESIIQ 174
Query: 189 AVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMK- 247
+G+ + + LK+ K I S+ K + + Q +Q+I L+ RE +K
Sbjct: 175 MLGLISNQDLLKESITVEKERIR-SQASKSEEDMEQTEQLIELV------LCIREHMLKT 227
Query: 248 -YFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT 306
+ K + P F CP++ ++M+DPV +SGQTF+R++I+KW +G +CP T
Sbjct: 228 EFLEVAKGISIPPY-----FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRT 282
Query: 307 MTVLDTSILRPNKTLRQSIEEWKDRN 332
VL L PN T++ I W + N
Sbjct: 283 RQVLTHQELIPNYTVKAMIASWLEAN 308
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 21/296 (7%)
Query: 453 DNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTD-HHKASLLEGNVLGPLLHL 511
D+ M ++ K L++ L +G VK A + + + ++ + + PLL L
Sbjct: 464 DDSGTMTTSHTIK-LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSL 522
Query: 512 VSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSSSSLREETATAI 571
+ + ++ AV AL NLS N +++ GA+ PLV +L ++ + +E +A ++
Sbjct: 523 LYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVL---NTGNDRAKENSAASL 579
Query: 572 MHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFNALCRSPSAGNI 631
L+V + +E + +S+ I +L+NL G + +AL +
Sbjct: 580 FSLSVLQVNRER------IGQSNAAI---QALVNLLGKGTFRGKKDAASALFNLSITHDN 630
Query: 632 KTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCL--VDDGDEAIIREHVGQKCLETLVT 689
K + Q A+ LV+L + D E V AV L L V +G +AI+RE +ET+
Sbjct: 631 KARIVQAKAVKYLVELLDPDLEMVD-KAVALLANLSAVGEGRQAIVREGGIPLLVETV-- 687
Query: 690 IIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQNDPNRFQ 745
+ S +E AS + L P+F +L GA+P ++ ++G Q + Q
Sbjct: 688 DLGSQRGKENAASVL--LQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQ 741
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 399 AVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQM 458
+ A L LS R++IG I LV + + +DA L NLS + DN ++
Sbjct: 575 SAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARI 634
Query: 459 AKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLLEGNVLGPLL-HLVSRGDI 517
+A K+L++ L E V +A + + +A + EG + PLL V G
Sbjct: 635 VQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGI--PLLVETVDLGSQ 692
Query: 518 QMKKVAVKALRNLS-SVPQNGLQMIKEGAVGPLVDL 552
+ K+ A L L + P+ +++EGA+ PLV L
Sbjct: 693 RGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVAL 728
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 260 LEPLQ-------SFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDT 312
LEPL F CPI+ D+M DPV S+GQT++R++I+ W + GN CP+T L
Sbjct: 5 LEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSD 64
Query: 313 SILRPNKTLRQSIEEW 328
L PN TLR+ I+EW
Sbjct: 65 FTLIPNHTLRRLIQEW 80
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 258 QPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKW-FSDGNNLCPLTMTVLDTSILR 316
Q +E F CPI+ D+M DPV S+G T++R +IEKW FS N CP+T V+ + L
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 317 PNKTLRQSIEEWKDRNTMITIASM---KPKLVSTEVEEVL 353
PN TLR+ I+ W N I + KP + +E+E+++
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLI 102
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV S+G T++R +I++W DGNN CP TM +L PN TL + I
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 326 EEWKD 330
+ W D
Sbjct: 75 DHWSD 79
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV +G T++R++I++W GNN CP TM +L PN+TL++ I
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLI 73
Query: 326 EEWKD 330
E W D
Sbjct: 74 EIWSD 78
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 254 SLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTS 313
S+GS+P P + F CPIT + DPV +GQT+ER AI++W GN CP+T L S
Sbjct: 506 SMGSKP--P-KDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS 562
Query: 314 IL-RPNKTLRQSIEEWKDRN 332
IL + N L++ I WK++N
Sbjct: 563 ILPKTNYVLKRLITSWKEQN 582
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 254 SLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTS 313
S+GS+P P + F CPIT + DPV +GQT+ER AI++W GN CP+T L S
Sbjct: 506 SMGSKP--P-KDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS 562
Query: 314 IL-RPNKTLRQSIEEWKDRN 332
IL + N L++ I WK++N
Sbjct: 563 ILPKTNYVLKRLITSWKEQN 582
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 24/293 (8%)
Query: 43 FKELAAYLERIVPVLKELNKRDLSHSEGLNSAIEILNREIKGAKELTTECSK-RNKVYLL 101
+K + L + P+ + D E L A E L +++ + +L +KVY +
Sbjct: 29 YKRVEELLRVLKPIADVVVTSDFVFDEKLGKAFEELTQDVDQSIDLFRSWQAFSSKVYFV 88
Query: 102 MNCRAIVKRLKDTAREISQALGILPLASLDLSTDIIE--EIEKVCDNMQRAEFRAAIAEE 159
+ +++ +++DT + Q L ++S + D + +E+ + ++ + E
Sbjct: 89 LQIESLLPKMRDTIVDTFQFL----MSSKNHLPDELSPASLEQCLEKIKHLSY------E 138
Query: 160 EILEKVESGIQERNVDRSYANHLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQ 219
EI ++ ++++ + +L I + G+ + + L E + + E + ++
Sbjct: 139 EISSVIDGALRDQRDGVGPSPEILVKIGENTGLRSNQEILI-EAVALERQKEMAEQSENN 197
Query: 220 AEAVQMDQIIALLERADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPV 279
AE +DQ+I ++ R E K+ S + L F+CP++ +VM DPV
Sbjct: 198 AEVEFLDQLIVIVNRM--------HERLLLIKQTQTSSVAI--LADFFCPLSLEVMTDPV 247
Query: 280 ETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRN 332
SSGQT+E++ I++W G +CP T L + L PN T++ I W + N
Sbjct: 248 IVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIANWCETN 300
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 416 IGDVQGCILLLVTMASSDDNQASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGP 475
IG+ G I+LLV + S D+ +A L NLS +D+N +A A + L+ L G
Sbjct: 579 IGN-SGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGS 637
Query: 476 ESVKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQ 535
K A TL + + + +K + + +GPL+ L+ G + KK A AL NLS +
Sbjct: 638 SEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQE 697
Query: 536 NGLQMIKEGAVGPLVDLL 553
N +++ GAV L+DL+
Sbjct: 698 NKAMIVQSGAVRYLIDLM 715
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 210 IENSRMRKDQAEAVQMDQ----IIALLERADAASSPREKEMKYFSK--RKSLGSQPLEPL 263
+ N+ RK+ ++ M+Q + L + + S + F K + ++GS+P P
Sbjct: 458 VRNNIKRKNDSQTPSMNQDNENSLVLNDSSHCESEDGYQSSSSFPKLEKLTIGSKP--P- 514
Query: 264 QSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSIL-RPNKTLR 322
+ F CPIT + DPV +GQT+ER AI++W GN CP+T L +IL + N L+
Sbjct: 515 KDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYVLK 574
Query: 323 QSIEEWKDRN 332
+ I WK++N
Sbjct: 575 RLIVSWKEQN 584
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ + M DPV +GQT+ERS I KWF+ G+ CP TM L ++ PNKTL Q I
Sbjct: 64 FICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLHQLI 123
Query: 326 EEW 328
W
Sbjct: 124 YTW 126
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ DVM PV +G T++R++I++W GNN CP TM +L T PN TL++ I
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLI 75
Query: 326 EEWKD 330
W D
Sbjct: 76 NIWSD 80
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 18/111 (16%)
Query: 226 DQIIALLER----ADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVET 281
DQI+ +LE AD A R SL + P +P F+CP+ +DVM +P
Sbjct: 722 DQILPVLESLKKVADKA-------------RNSLSAAPSQPPSHFFCPLLKDVMKEPCIA 768
Query: 282 SSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEEWKDRN 332
+ G T++R AIE+W + + P+T + L L PN TL +I EW++RN
Sbjct: 769 ADGYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNLLPNHTLYAAIVEWRNRN 818
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNN-LCPLTMTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV +GQT++R++IE W S GNN CP+T L L PN TLR+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTLRRL 77
Query: 325 IEEW 328
I+EW
Sbjct: 78 IQEW 81
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ D+M DPV S+G T++R +IE W + GN CP+T TVL T PN T+R+ I
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIRKMI 94
Query: 326 EEW 328
+ W
Sbjct: 95 QGW 97
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV + G ++ER AIE W S N P+T L T++L PN+TL+ +I
Sbjct: 421 FLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLKMAI 480
Query: 326 EEW 328
W
Sbjct: 481 FRW 483
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKW-FSDGNNLCPLTMTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV S+G T++R +IEKW F+ N CP+T + + L PN TLR+
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRL 75
Query: 325 IEEWKDRNTMIT---IASMKPKLVSTEVEEVL 353
I+ W N I + +P + +E+E+++
Sbjct: 76 IQSWCTLNASYGVERIPTPRPPICKSEIEKLI 107
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ ++M DPV +SG T++R IEKWF G CP+T TVL + PN T+R+ I
Sbjct: 37 FQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIRRMI 96
Query: 326 EEW 328
+ W
Sbjct: 97 QGW 99
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 125/297 (42%), Gaps = 49/297 (16%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLT-MTVLDTSILRPNKTLRQS 324
F CPI+ ++M DPV SG TF+R +I++W GN CP+T + + +T L PN LR
Sbjct: 9 FRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHALRSL 68
Query: 325 I---------EEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREWERL 375
I E + R S L+ST V + +L+ L + RL
Sbjct: 69 ILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTR-------LVRL 121
Query: 376 ANGDDAVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDN 435
D ++ R++ E A L + +CN + +
Sbjct: 122 TKRDSSIR-------RKVTESGAVRAALDCVDSCNQVLQE-------------------- 154
Query: 436 QASRDAQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHH 495
+ LL NLS DDN V + + ++ L G K AT L + + + +
Sbjct: 155 ----KSLSLLLNLSLEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVN 210
Query: 496 KASLLE-GNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVD 551
KA++ + + L+ L+ G+ + +K + AL L S P N +++ G+V LV+
Sbjct: 211 KATIGSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVE 267
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 261 EPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKT 320
EP Q F CPIT D+M DP + G T+E AI +WF G+ P+ L + L PN
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLA 411
Query: 321 LRQSIEEW 328
LR +I+EW
Sbjct: 412 LRSAIQEW 419
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 235 ADAASSPREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEK 294
ADA R+K +K + ++ + + +P SF+CPIT++VM DP + G T+E +I K
Sbjct: 330 ADAMREERDKALK--TAKEQMEKR--QPPSSFFCPITQEVMKDPHFAADGFTYEAESIRK 385
Query: 295 WFSDGNNLCPLTMTVLDTSILRPNKTLRQSIEE 327
W S G+ P+T L L PN+ LR +IEE
Sbjct: 386 WLSTGHQTSPMTNLRLSHLTLVPNRALRSAIEE 418
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 250 SKRKSLGSQ-PLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMT 308
+K KSL S P E F CPITR++M DPV S G ++E+ A+E W S P+T
Sbjct: 395 TKVKSLSSGIPDE----FICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNL 450
Query: 309 VLDTSILRPNKTLRQSIEEW 328
VL +++L PN+TL+ +I W
Sbjct: 451 VLPSAVLTPNRTLKMAINRW 470
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPI+ + M DPV +GQT+ER I KWF+ G+ CP TM L + PNKTL I
Sbjct: 68 FICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLI 127
Query: 326 EEW 328
W
Sbjct: 128 YTW 130
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 147/369 (39%), Gaps = 67/369 (18%)
Query: 193 STERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASSPREKEMKYFSKR 252
ST L +E + EI KD E + +I+ L + + SK
Sbjct: 9 STNADTLWRELHKVLPEIWYDGGGKDHCEIDEAIRILTCLRKIE-------------SKN 55
Query: 253 KSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDT 312
P+E + F C ++ +M++P+ +SGQTFE+S I +W CP T VL
Sbjct: 56 PESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHERT-CPRTKQVLYH 114
Query: 313 SILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQDLCQQRDQHREW 372
+ PN + + I+EW CL D + D+ +
Sbjct: 115 RFMIPNHLINEVIKEW--------------------------CLIHNFDRPKTSDEVID- 147
Query: 373 ERLANGDDAVESIVRSLG--RRIEE-----RKLAVALLLELSTCNTLRDQIGDVQGCILL 425
L GD +ES+++ + +E+ ++LA+ S C +I D L
Sbjct: 148 --LFTGD--LESLLQRISSPSSVEDQTEAAKELALKAKRFSSVCVYFVAKIPD--SITRL 201
Query: 426 LVTMASSDDNQASRDAQELLENL-------SFSDDNVVQMAKANYFKHLLQR-LSAGPES 477
L ++ S+D+ E LEN+ S S+ N +A+ LL + + G
Sbjct: 202 LTPLSISEDSNP-----EFLENIVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVL 256
Query: 478 VKMRMATTLAEMELTDHHKASLLEGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNG 537
++ A T+ + TD +K + VL L+H++ GD A AL NL V +
Sbjct: 257 TRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEIS 316
Query: 538 LQMIKEGAV 546
+ + EG +
Sbjct: 317 EKAVSEGLI 325
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 252 RKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLD 311
R + S P+ F CPITR++M DPV + G ++E+ A+E W S+ P+T L
Sbjct: 394 RMKMVSVPVAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLP 453
Query: 312 TSILRPNKTLRQSIEEW 328
+ +L PN+TL+ +I W
Sbjct: 454 SLVLTPNRTLKMAISRW 470
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV S G ++ER A+E W P+T L + +L PN+TL+ +I
Sbjct: 406 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 465
Query: 326 EEW 328
W
Sbjct: 466 NRW 468
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 266 FYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTVLDTSILRPNKTLRQSI 325
F CPITR++M DPV S G ++ER A+E W P+T L + +L PN+TL+ +I
Sbjct: 408 FICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAI 467
Query: 326 EEW 328
W
Sbjct: 468 NRW 470
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34
PE=3 SV=1
Length = 801
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 250 SKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGNNLCPLTMTV 309
SK K GS P ++CPI R++M +P + G T+ER AI W + +N+ P+T
Sbjct: 714 SKVKKEGSNLRAP-SHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNISPVTRQK 771
Query: 310 LDTSILRPNKTLRQSIEEWKDR 331
LD L PN TLR +I +WK R
Sbjct: 772 LDHFKLTPNHTLRSAIRDWKSR 793
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 319,905,821
Number of Sequences: 539616
Number of extensions: 12764589
Number of successful extensions: 45587
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 44761
Number of HSP's gapped (non-prelim): 870
length of query: 968
length of database: 191,569,459
effective HSP length: 127
effective length of query: 841
effective length of database: 123,038,227
effective search space: 103475148907
effective search space used: 103475148907
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)