Citrus Sinensis ID: 002092
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 968 | 2.2.26 [Sep-21-2011] | |||||||
| Q86TW2 | 530 | Uncharacterized aarF doma | yes | no | 0.286 | 0.522 | 0.353 | 1e-42 | |
| Q9D0L4 | 525 | Uncharacterized aarF doma | yes | no | 0.276 | 0.510 | 0.343 | 3e-39 | |
| Q5ZMT7 | 519 | Uncharacterized aarF doma | yes | no | 0.291 | 0.543 | 0.331 | 4e-39 | |
| P73577 | 408 | Uncharacterized protein s | N/A | no | 0.279 | 0.664 | 0.334 | 5e-38 | |
| P73627 | 585 | Uncharacterized protein s | N/A | no | 0.339 | 0.562 | 0.296 | 5e-38 | |
| Q6INL7 | 520 | Uncharacterized aarF doma | N/A | no | 0.289 | 0.538 | 0.322 | 2e-37 | |
| Q46189 | 530 | Uncharacterized protein i | N/A | no | 0.280 | 0.513 | 0.320 | 2e-37 | |
| Q5M7P6 | 523 | Uncharacterized aarF doma | yes | no | 0.289 | 0.535 | 0.322 | 3e-37 | |
| Q55884 | 567 | Uncharacterized protein s | N/A | no | 0.300 | 0.513 | 0.333 | 5e-37 | |
| Q54P00 | 695 | Probable serine/threonine | yes | no | 0.317 | 0.441 | 0.288 | 7e-37 |
| >sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 14/291 (4%)
Query: 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLP 95
+SK ++ + H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P
Sbjct: 71 RSKSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAP 130
Query: 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155
+QE+ Q I + G+ + +F F +TPL TAS+AQVH+A L DGR V VKVQH ++
Sbjct: 131 QSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVR 190
Query: 156 TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCK 215
+D+ + +V + P+++F ++DE K P ELDF +E N VS L
Sbjct: 191 AQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML--- 247
Query: 216 NKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275
+H D K P D+ S+E VL++EF+DG ++ND + +E ++ ++ +
Sbjct: 248 -RHFDFLKVPRIHWDL-------STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLG 299
Query: 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSSMK 323
+ Y+ I+V+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 300 KMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFR 350
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: - |
| >sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus musculus GN=Adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 154/282 (54%), Gaps = 14/282 (4%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P +QEV Q
Sbjct: 73 QVHLRSARRLFELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEVRQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+
Sbjct: 133 VIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILL 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ +V + P ++F ++DE K P ELDF +E N V+ L +H D K
Sbjct: 193 MEVLVLAVKQLFPDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAHML----RHFDFLKV 248
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S++ VL++EF++G ++ND +E ++ ++ + + Y+ I+V
Sbjct: 249 PQIHWEL-------STKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHLGKMYSEMIFV 301
Query: 285 DGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSSMK 323
+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 302 NGFVHCDPHPGNVLVRKRPDTGKAEIVLLDHGLYQVLTEEFR 343
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus gallus GN=ADCK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 159/296 (53%), Gaps = 14/296 (4%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y LK L P QE+ Q
Sbjct: 70 QVHLRSAERLRELCCANRGTFIKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQEIEQ 129
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VK+QH ++ +D+
Sbjct: 130 VIREDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFL 189
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + P ++F +++E K P ELDF +E N V+ L K+ + K
Sbjct: 190 MEVLLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQML----KNFEFLKV 245
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S+ VL++EFM+G ++ND +E G++ ++ + + Y+ I+V
Sbjct: 246 PRIYWEL-------STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFV 298
Query: 285 DGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+GF + DPHPGN LV K P ILLD GL + LS S + +++ A + D
Sbjct: 299 NGFVHCDPHPGNVLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Gallus gallus (taxid: 9031) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0889 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 57 LIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGG 116
++++L ++KLGQ LSTR D+LP YI+ L LQ ++PP P + ++REF + +G
Sbjct: 49 ILVELGPFYIKLGQLLSTRPDLLPPRYINALTALQSNVPPLPWSAIEDLLQREFPQPLGE 108
Query: 117 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 176
F + P+A SI Q+HRA L G V +KV+ GI I+ +D K + + +A E
Sbjct: 109 TFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAELLALTE 168
Query: 177 --PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 234
YD + DE+ + EL+F++EA T + NL K D N+ ++IP
Sbjct: 169 FGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLA-KTTWFDPNQ-------LVIP 220
Query: 235 EVIQ--SSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGF 287
+V +++ L+LE++DG+ L S + K+++ + RA+ Q+YVDGF
Sbjct: 221 KVYWELTNQKFLVLEWLDGVPILTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYVDGF 280
Query: 288 FNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
F+ DPHPGN D R L+D G+ +L +Q L +M A + D
Sbjct: 281 FHADPHPGNIFYLAD--GRLALIDCGMVGRLDPRTRQLLTEMLLAIVDLD 328
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 173/351 (49%), Gaps = 22/351 (6%)
Query: 5 NIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGL 64
+I RRR+ ++ + + + ++ + L QR R AK + ++ L
Sbjct: 40 SITRRRIDIWGFVLTLLYQFWLNGKKWSYAGGYTEEKLQQR-RRRQAKWIRENLLSLGPT 98
Query: 65 WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124
++K+GQ STR+D+ P Y+ L +LQD +P ++ + IE E G+ + ++ F
Sbjct: 99 FIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKPIAKLYRSFDPV 158
Query: 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWI----AWAEPQYD 180
PLA AS+ QVH+A L G VVVKVQ G+K + DL K I + W + D
Sbjct: 159 PLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQNHPKWGRGR-D 217
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q 238
+N I +E CK +E D+ E + N + ED K +P V
Sbjct: 218 WNGIYEECCKILWQETDYLREGRSADTFRRNF----RGEDWVK---------VPRVYWRY 264
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
+S +L LE++ GI+++ ++LEA G+ ++++ + RAY Q+ GFF+ DPHPGN
Sbjct: 265 TSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNLA 324
Query: 299 VSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
VS + I DFG+ +++ K L F AE + ++++ +G
Sbjct: 325 VSPEAGEL-IFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALG 374
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus laevis GN=adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 18/298 (6%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A R+L+L G ++K+GQ+L+ ++P Y L L P P +V Q
Sbjct: 73 QVHLRSAHRLLDLCCFNRGTFIKVGQHLAALEYLVPPEYTKTLSVLHSQAPCTPFTDVVQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F +F +TPL AS+AQVHRA L DGR+V VKVQH ++ D+
Sbjct: 133 VIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILI 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + PQ++F +I+E K P ELDF +E N +S+ + +
Sbjct: 193 MEVLLHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFS-------- 244
Query: 225 PAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282
+ IP + S++ VL++E+M+G ++ND E ++ ++ KV + + Y+ I
Sbjct: 245 -----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMI 299
Query: 283 YVDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+V GF + DPHPGN LV ++P + ILLD GL + L+ S + ++ A D
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment) OS=Clostridium pasteurianum PE=3 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 18/290 (6%)
Query: 65 WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124
++K+GQ LSTR D+LP PYI L +LQ+++PP ++ E ++ F+ F +T
Sbjct: 47 FIKIGQILSTRPDLLPLPYIKELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKT 106
Query: 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDW--IAWAEPQYDFN 182
P+ +ASIAQVH A L DGR V+VK+Q GI ++ DL K +++ + + D
Sbjct: 107 PIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSIIKKLLNITKTKFTDALIDPK 166
Query: 183 PIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSN-KKPAYEVDVLIPEVIQSSE 241
IDE +ELDF +E N + K +ED + Y +D L +E
Sbjct: 167 EAIDELFISTTQELDFINEINNIK------KFKKLNEDVKFVRTPYTIDKL------CTE 214
Query: 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK 301
++++E + GI++++ + L G + +++ +++T +Y Q++ DGFF+GDPHPGN L+ +
Sbjct: 215 KIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHGDPHPGNLLIRE 274
Query: 302 DPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351
+ +DFG+ +S S+K +L A A D ++S +G++
Sbjct: 275 N---HICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVK 321
|
Clostridium pasteurianum (taxid: 1501) |
| >sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus tropicalis GN=adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 18/298 (6%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A R+L+L G ++K+GQ+L ++P Y L L P P +V Q
Sbjct: 73 QVHFRSAHRLLDLCCANRGTFIKVGQHLGALEYLVPPEYTKTLSVLHSQAPCTPFPDVVQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F++F E PL AS+AQVHRA L DGR+V VKVQH ++ D+
Sbjct: 133 VIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILL 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + PQ++F +I+E K P ELDF +E N +SA + +
Sbjct: 193 MEVLLHAVKKIFPQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFS-------- 244
Query: 225 PAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282
+ IP + S++ VL++E+M+G ++ND E ++ ++ +V + + Y+ I
Sbjct: 245 -----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMI 299
Query: 283 YVDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+V GF + DPHPGN LV ++P ILLD GL + L+ S + ++ A D
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0095 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 45 RAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQE 101
R+ +R +R L+ +L L ++K+GQ LSTRAD++P YI QLQD +PP ++
Sbjct: 49 RSAQRRYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQ 108
Query: 102 VSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILED 161
IE+E ++ +F F TPLA+AS+ QVHRA L G VVVKVQ G+ +++ D
Sbjct: 109 AIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLD 168
Query: 162 -------LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGC 214
L+ AK + +Y+ I E+ E+D+ E +N N
Sbjct: 169 FELLHQTLRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFAD 228
Query: 215 KNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272
+ V +PE+ ++ VL LE++ GI+++D ++LE G+N V++
Sbjct: 229 YPR-------------VRVPEIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQ 275
Query: 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFA 332
AY Q+ VDGFF DPHPGN V D I DFG ++ K + + FFA
Sbjct: 276 TGICAYLKQLLVDGFFQSDPHPGNMAV--DSQGDLIFYDFGTMAEVKIIAKDQMVQTFFA 333
Query: 333 AAEGDHVALLSAFAEMGL 350
D +L A MGL
Sbjct: 334 VLRKDTNQVLEALIYMGL 351
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium discoideum GN=abkD PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 29/336 (8%)
Query: 5 NIYRRRMSVFSMAILIYLDYKAV----QQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
N+ R A I ++YK + ++ ++++KSKI H+ +A +L+L +
Sbjct: 204 NVIVRFYRAMKCATKIMINYKILSYTPEKSSEYLEKSKI------CHQESADLILDLCLT 257
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
GL++K GQY+++ +LP Y L LQD P R EV ++ G + F D
Sbjct: 258 NGGLYIKAGQYIASLNHILPIQYTKTLSVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSD 317
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F P+A AS+AQVHRA +G +V VKVQ+ ++ D+ ++ + A P ++
Sbjct: 318 FDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFE 377
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-- 238
FN + +E KELDF+ EA+N + +L N + IP+V +
Sbjct: 378 FNWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNN-------------NAYIPKVFRPY 424
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
SS+ +L EF+ G ++N+ +++ + G++++ V + QI++ F + DPH GN L
Sbjct: 425 SSKRILTTEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGNVL 484
Query: 299 VSKDP--PHRP--ILLDFGLTKKLSSSMKQALAKMF 330
V + P P++P +LLD GL ++ + ++
Sbjct: 485 VRQHPNHPNQPQIVLLDHGLYREYDEEFRLNFCNLY 520
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 968 | ||||||
| 225429826 | 978 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.979 | 0.725 | 0.0 | |
| 255574137 | 965 | Ubiquinone biosynthesis protein coq-8, p | 0.987 | 0.990 | 0.725 | 0.0 | |
| 297812683 | 1011 | ABC1 family protein [Arabidopsis lyrata | 0.982 | 0.940 | 0.695 | 0.0 | |
| 18420844 | 1009 | ABC1 family protein [Arabidopsis thalian | 0.983 | 0.943 | 0.695 | 0.0 | |
| 224115612 | 987 | predicted protein [Populus trichocarpa] | 0.992 | 0.973 | 0.699 | 0.0 | |
| 334187920 | 1040 | ABC1 family protein [Arabidopsis thalian | 0.983 | 0.915 | 0.673 | 0.0 | |
| 356552616 | 965 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.984 | 0.697 | 0.0 | |
| 356563711 | 966 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.983 | 0.691 | 0.0 | |
| 224121392 | 972 | predicted protein [Populus trichocarpa] | 0.972 | 0.968 | 0.714 | 0.0 | |
| 356563713 | 994 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.955 | 0.671 | 0.0 |
| >gi|225429826|ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1461 bits (3781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/988 (72%), Positives = 830/988 (84%), Gaps = 30/988 (3%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWGNIYRRR+ VF++A +IYLDYKA+QQREKW KSK +ALW+RAHERNAKRVLNLI++
Sbjct: 1 MGWGNIYRRRVKVFTVAFIIYLDYKALQQREKWSSKSKKAALWERAHERNAKRVLNLIVE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLPE YISLLKQLQDSLPPRP++EV +TIE+E G+SM +F
Sbjct: 61 LEGLWVKLGQYLSTRADVLPEAYISLLKQLQDSLPPRPLKEVCRTIEKELGKSMDDLFSS 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV+ PLATASIAQVHRATL G VVVKVQH+GIKT+ILEDLKNAKSI DWIAWAEPQYD
Sbjct: 121 FVDAPLATASIAQVHRATLRSGEDVVVKVQHEGIKTVILEDLKNAKSIADWIAWAEPQYD 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWC+EAPKELDF+ EAENTR VS NLGCKNK++ P +VDVLIPE+IQS+
Sbjct: 181 FNPMIDEWCREAPKELDFDHEAENTRKVSRNLGCKNKND---VMPGNQVDVLIPEIIQST 237
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VLILE+MDG+RLNDCESL+AFG++KQK+VEEITRAYAHQIYVDGFFNGDPHPGNFLVS
Sbjct: 238 EKVLILEYMDGVRLNDCESLKAFGIDKQKLVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 297
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+PPHRP+LLDFGLTK LSSSMKQALAK+F A+AEGDHVALLSA +EMGLRLRLD+P+QA
Sbjct: 298 KEPPHRPVLLDFGLTKSLSSSMKQALAKLFLASAEGDHVALLSALSEMGLRLRLDLPDQA 357
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+T+FFR+S PA+EA E +++LS+QR KN+KVIQEKMKLN+KEVKRFNPVDAFPGDIV
Sbjct: 358 MEVATVFFRSSTPASEALENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVDAFPGDIV 417
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF+RVLNLLRGLS+ M+VRI YLDIMRPFAE VLQ INK P+V+++WIY P+HSDVE
Sbjct: 418 IFARVLNLLRGLSTIMDVRISYLDIMRPFAESVLQGYINKGPAVNSQWIYDTPVHSDVET 477
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
KLR LVELGND KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKGI
Sbjct: 478 KLRRLLVELGNDDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGI 537
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVD GKLKL E+IANIWPEF SN K+LIKVHHVL HTSGL N D+S ENPL
Sbjct: 538 TAGMIHWLVDKGKLKLGESIANIWPEFGSNKKELIKVHHVLTHTSGLQNALGDISRENPL 597
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
L+C+WDECLNRIA+S PETEPG EQLYHYLSFGWLCGGIIE ASGKKFQEILEE I+PL
Sbjct: 598 LMCEWDECLNRIAMSVPETEPGHEQLYHYLSFGWLCGGIIEHASGKKFQEILEEAFIRPL 657
Query: 661 SID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
I+ GVESRLA+LT+DTDD+ K+S +NRPD LP SF + IS+L + PA
Sbjct: 658 QIEGELYVGIPPGVESRLATLTVDTDDVRKLSVYSNRPD--LPVSFTSN-ISELVTVLPA 714
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 771
+FN LNIRR+IIP+ANGHCSARALARYYA LADGG++PPPHS SKPPLGSHPHIP FPS
Sbjct: 715 LFNTLNIRRSIIPSANGHCSARALARYYATLADGGILPPPHSTSSKPPLGSHPHIPSFPS 774
Query: 772 HETSKKQKGTKKELLAALKNKTN----NSEHGHKYTKDLEGGSHIRTASGDTYARL---- 823
+TSKKQKG K + +AA NKTN N++ G + +KD + R A D + R
Sbjct: 775 QKTSKKQKGGKSKDVAAASNKTNIHEQNTDDGSRSSKD---SCYNRKARCDNHGRFPHDS 831
Query: 824 --INIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGL 881
+ T S+N S N D+ S+ KIF+NPRIHDAFLGVG+Y + P+G+FGL
Sbjct: 832 GSSSESTVSNNGHRIGSTENGDDSPKSDT-KIFSNPRIHDAFLGVGEYENYGFPSGKFGL 890
Query: 882 GFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELN 941
GFK +++DG+ +GFGHSGMGGSTG+CD+NN+FAIAVTLNKMS G TG+II F+CSELN
Sbjct: 891 GFKSCSSKDGTLLGFGHSGMGGSTGYCDINNKFAIAVTLNKMSLGGVTGKIIQFICSELN 950
Query: 942 LPVPEDYLRFAEVEHDTPQ-DLGQPLIN 968
LPVPEDY RF+ E Q ++ +PLIN
Sbjct: 951 LPVPEDYSRFSGSEKPEEQSNVWRPLIN 978
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574137|ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1445 bits (3740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/977 (72%), Positives = 836/977 (85%), Gaps = 21/977 (2%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWGNIY+RR+ VF++AI+IYLDYKA+QQR+KW KSK +ALW++AHERNAKRVLNLII+
Sbjct: 1 MGWGNIYKRRVRVFAVAIMIYLDYKAIQQRDKWTIKSKKTALWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLP YISLLK+LQDSLPPRP+QEV QTI++E G+S+ +F
Sbjct: 61 LEGLWVKLGQYLSTRADVLPHAYISLLKKLQDSLPPRPLQEVCQTIQKELGKSLDDLFSY 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F TPLATASIAQVHRATL++G++VVVKVQH+GIKTIILEDLKNAKSIVDWIAWAEPQYD
Sbjct: 121 FDRTPLATASIAQVHRATLINGQEVVVKVQHEGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAPKELDFN EAENTRIVS+NLGC+NK++DS + A +VDVLIPEVIQSS
Sbjct: 181 FNPMIDEWCKEAPKELDFNIEAENTRIVSSNLGCRNKNKDS--RHANQVDVLIPEVIQSS 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VLILE+MDGIRLND ESLEA+GV+KQKVVEEITRAYA+QIY+DGFFNGDPHPGNFLVS
Sbjct: 239 EKVLILEYMDGIRLNDLESLEAYGVDKQKVVEEITRAYAYQIYIDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
KDP HRP+LLDFGLTKK+SSS+KQALAKMF A+ EGDHVALLSAFAEMGL+LRLD+PEQA
Sbjct: 299 KDPQHRPVLLDFGLTKKISSSIKQALAKMFLASVEGDHVALLSAFAEMGLKLRLDLPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+ +FFRTS PANEAFE +K+L+EQR+KN+KVIQEKMKL+QKEVKRFNPVDAFPGDIV
Sbjct: 359 MEVTNVFFRTSTPANEAFENMKSLAEQRSKNMKVIQEKMKLSQKEVKRFNPVDAFPGDIV 418
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IFSRVLNLLRGLSSTMNVRI+Y +IMRPFAE+ LQ INK P+V+A+WI++ P+HSDVE
Sbjct: 419 IFSRVLNLLRGLSSTMNVRIIYQEIMRPFAEFALQGNINKGPTVNAQWIHNTPVHSDVET 478
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
KLR L+ELGN+ KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKGI
Sbjct: 479 KLRQLLIELGNEDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGI 538
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGMLHWLVDNGK+KL++++ANIWP+F ++GKDLIKV+HVLNHTSGLHN +L ENP+
Sbjct: 539 TAGMLHWLVDNGKVKLDDSVANIWPQFGTSGKDLIKVYHVLNHTSGLHNALSNLREENPM 598
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
+C+WDECLN+I LS PETEPG+EQLYHYLSFGWLCGGIIE ASGK+FQEILEE II+PL
Sbjct: 599 QLCNWDECLNQICLSVPETEPGKEQLYHYLSFGWLCGGIIEHASGKRFQEILEEAIIRPL 658
Query: 661 SID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
I+ GVESRLA+L +D +DL+K+ + +RPD LPS+FQP I+QL PA
Sbjct: 659 KIEGELYVGIPPGVESRLATLMVDMNDLSKLVEMRSRPD--LPSTFQPSNITQLLTTVPA 716
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 771
+FNML +RRA IPAANGHCSARALARYYAALADGG+ PPPHS +KP LGSHPHIPKF S
Sbjct: 717 LFNMLIVRRATIPAANGHCSARALARYYAALADGGLTPPPHSSFTKPALGSHPHIPKFSS 776
Query: 772 HETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSS 831
+T KKQKG +KE+ K ++ S++ + KDLE G++ D Y RL SS
Sbjct: 777 EKTPKKQKGKRKEVTTTSKKRS--SDYSRNHNKDLEEGNN----GNDGYTRLAT--DGSS 828
Query: 832 NTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTRDG 891
+ S DS ++ D + NV +IF +PRIHDAFLGVG+Y +LA+PNG+FGLGF+R ++ DG
Sbjct: 829 SASAADSFASGDGNKRDNVTRIFIDPRIHDAFLGVGEYENLAVPNGKFGLGFRRNSSNDG 888
Query: 892 SYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDYLRF 951
S IGFGHSGMGGSTGFCD+ NRFAIAVT+NK+S G T +I VCSE+N+P+PE+
Sbjct: 889 SLIGFGHSGMGGSTGFCDIKNRFAIAVTVNKLSVGFVTRKIAELVCSEVNVPLPEELSIS 948
Query: 952 AEVEHDTPQDLGQPLIN 968
E D ++G+PLIN
Sbjct: 949 GERGPDLELNIGKPLIN 965
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812683|ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297320062|gb|EFH50484.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1412 bits (3656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/981 (69%), Positives = 810/981 (82%), Gaps = 30/981 (3%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MG GNIYRRRM VFS+AILIYLDYK VQQ+EKWIK SK+ ALW +AH+RNAKRVLNLI++
Sbjct: 48 MGLGNIYRRRMKVFSVAILIYLDYKGVQQKEKWIKNSKVPALWDKAHDRNAKRVLNLIVE 107
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLP+ YISLL QLQDSLPPRP+QEV +TIERE G SM +F D
Sbjct: 108 LEGLWVKLGQYLSTRADVLPQAYISLLTQLQDSLPPRPLQEVCRTIERELGHSMDVLFTD 167
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 168 FVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIAWAEPQYN 227
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + VDVLIP++IQSS
Sbjct: 228 FNPMIDEWCKEAPRELDFNIEAENTRAVSKNLGCKKTYDEV--RSDNRVDVLIPDIIQSS 285
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E+VLILE+MDGIRLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPHPGNFLVS
Sbjct: 286 ESVLILEYMDGIRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPHPGNFLVS 345
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+P H PILLDFGLTKK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LRLD+P+QA
Sbjct: 346 KEPQHLPILLDFGLTKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLRLDMPDQA 405
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
M V+ LFFR+S P+NEA +T+K L++QR +N+KVIQEKM+LNQKEVKRFNP+DAFPGDIV
Sbjct: 406 MSVAGLFFRSSTPSNEAMKTLKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPIDAFPGDIV 465
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ PIHSDVE+
Sbjct: 466 IFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHESPIHSDVES 525
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKG+
Sbjct: 526 KVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGV 585
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVD KL+L++ +ANIWP F SNGKD IKV+HVLNHTSG+HN + D ENPL
Sbjct: 586 TAGMIHWLVDKRKLQLDQTVANIWPGFGSNGKDTIKVNHVLNHTSGMHN-AFDPVGENPL 644
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
LICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKKFQEILEE I++PL
Sbjct: 645 LICDWDECLKRIANSSPETEPGNQQFYHYLTFGWLCGGILEYASGKKFQEILEESIVKPL 704
Query: 661 SID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
ID GVESRLA+LT+DTD+++K+S I ++P+ LPS+FQPDKI QLA P
Sbjct: 705 KIDGELYIGIPPGVESRLATLTLDTDEMSKLSSIASQPE--LPSTFQPDKILQLATNLPV 762
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 771
+FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH H+PKF S
Sbjct: 763 LFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHTHVPKFTS 822
Query: 772 -HETSKKQKGTKKELLAALKNKTNNSEHGHKYT-KDLEGGSHIRTASGDTYARLINIETS 829
+T+KK+K KE+ A K K+ + + Y K ++ ++ ARL++ +
Sbjct: 823 LKDTTKKRKS--KEMAATEKRKSKDHQERRLYDGKQFTSAGSSGESNTESLARLVDTSSY 880
Query: 830 SSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR 889
+ T N+D+ Q ++ +F+NP IHDAF+G GDY L +P+G+FGLGFKR ++
Sbjct: 881 AGKTEI-----NSDDHQ-HDIHNLFSNPSIHDAFMGAGDYSGLVVPDGKFGLGFKRVISQ 934
Query: 890 DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDYL 949
DGS +GFGHSGMGGSTGFCD+ NRF+IAVTLNKMS G T +I+ VCSELN+P+P+D+
Sbjct: 935 DGSLVGFGHSGMGGSTGFCDIKNRFSIAVTLNKMSMGGVTAKIVKLVCSELNIPLPKDF- 993
Query: 950 RFAEVEHDTPQD--LGQPLIN 968
+ DT D +G PLIN
Sbjct: 994 ---SLSTDTGPDSQMGTPLIN 1011
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420844|ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|16649083|gb|AAL24393.1| Unknown protein [Arabidopsis thaliana] gi|33589758|gb|AAQ22645.1| At5g24810/F6A4.20 [Arabidopsis thaliana] gi|332005981|gb|AED93364.1| ABC1 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/978 (69%), Positives = 812/978 (83%), Gaps = 26/978 (2%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MG GNIYRRRM VFS+AILIYLDYK VQQ+EKWIKKSK+ ALW +AH+RNAKRVLNLI++
Sbjct: 48 MGLGNIYRRRMKVFSIAILIYLDYKGVQQKEKWIKKSKVPALWDKAHDRNAKRVLNLIVE 107
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLP+ YISLL QLQDSLPPRP+QEV +TIERE G SM +F D
Sbjct: 108 LEGLWVKLGQYLSTRADVLPQAYISLLTQLQDSLPPRPLQEVCRTIERELGNSMDVLFTD 167
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 168 FVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIAWAEPQYN 227
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + A VDVLIP++IQSS
Sbjct: 228 FNPMIDEWCKEAPRELDFNIEAENTRTVSGNLGCKKTNDEV--RSANRVDVLIPDIIQSS 285
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E+VLILE+MDG+RLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPHPGNFLVS
Sbjct: 286 ESVLILEYMDGVRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPHPGNFLVS 345
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+P HRPILLDFGL+KK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LRLD+P+QA
Sbjct: 346 KEPQHRPILLDFGLSKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLRLDMPDQA 405
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
M V+ LFFR+S P++EA +T K L++QR +N+KVIQEKM+LNQKEVKRFNP+DAFPGDIV
Sbjct: 406 MSVAGLFFRSSTPSSEAMKTFKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPIDAFPGDIV 465
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ PIHSDVE+
Sbjct: 466 IFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHDSPIHSDVES 525
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKG+
Sbjct: 526 KVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGV 585
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVD KL+L++ +AN+WP F SNGKD IKVHHVLNHTSG+ N S D ENPL
Sbjct: 586 TAGMIHWLVDKRKLQLDQTVANMWPGFGSNGKDTIKVHHVLNHTSGMQN-SFDPVGENPL 644
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
LICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKK QEILEE I++PL
Sbjct: 645 LICDWDECLKRIANSSPETEPGSQQSYHYLTFGWLCGGILEYASGKKLQEILEESIVKPL 704
Query: 661 SID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
+ID GVESRLA+LT DTD+++K+S I ++P+ LPS+FQPDKI Q+A P
Sbjct: 705 NIDGELYIGIPPGVESRLATLTFDTDEMSKLSSIASQPE--LPSTFQPDKIIQMATNLPV 762
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 771
+FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH H+PKF S
Sbjct: 763 LFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHTHVPKFTS 822
Query: 772 HETSKKQKGTKKELLAALKNKTNNSEHGHKY-TKDLEGGSHIRTASGDTYARLINIETSS 830
+ + K+K KE+ A K K+ + + Y K S R ++ ++ ARL++ +S+
Sbjct: 823 LKDTTKKK-KGKEMAATEKGKSKDHQERKLYDEKQFMSASSSRESNTESLARLVDTNSSA 881
Query: 831 SNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTRD 890
T N+D+ Q ++ +F+NPRIHDAF+G GDY L +P+G+FGLGFKR ++D
Sbjct: 882 GKTEI-----NSDDHQ-HDIHNMFSNPRIHDAFMGAGDYSGLVVPDGKFGLGFKRAISQD 935
Query: 891 GSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDYLR 950
GS +GFGHSG+GGSTGFCD+NNRF+IAVTLNKMS G T I+ VCSELN+P+P+D+
Sbjct: 936 GSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIVKLVCSELNIPLPKDFA- 994
Query: 951 FAEVEHDTPQDLGQPLIN 968
++ D+ +G PLIN
Sbjct: 995 -TDIGADS--QMGTPLIN 1009
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115612|ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|222874919|gb|EEF12050.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1392 bits (3604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/994 (69%), Positives = 814/994 (81%), Gaps = 33/994 (3%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWGNIYRRR VF++A++IY+DYKA+Q+REK++KK K ALW++AHERNAKRV NL+++
Sbjct: 1 MGWGNIYRRRAKVFTLAMIIYIDYKALQKREKFMKKPKSDALWKKAHERNAKRVFNLMVE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQY+S+RADVLP +IS LKQLQDSLPPRP +EV TIE+E G+S +F+D
Sbjct: 61 LEGLWVKLGQYMSSRADVLPSAFISNLKQLQDSLPPRPFEEVCHTIEKELGKSTKEIFLD 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F E PLATASIAQVHRATL+DG++VVVKVQH+ IK IILEDLK+AKSIVDWIAWAEPQY+
Sbjct: 121 FDENPLATASIAQVHRATLIDGQKVVVKVQHEDIKKIILEDLKDAKSIVDWIAWAEPQYN 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
F+P+IDEWCKEAP+ELDFN EAENTR VS NLGC +K+ DSNK P +VDVLIPEVIQS+
Sbjct: 181 FSPMIDEWCKEAPQELDFNHEAENTRTVSRNLGCTSKY-DSNK-PINQVDVLIPEVIQST 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VLILE+MDGIRLND ESLEA G N QK+VEEITRA+AHQIYVDGFFNGDPHPGNFLVS
Sbjct: 239 EKVLILEYMDGIRLNDFESLEACGANNQKIVEEITRAFAHQIYVDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+PPHRPILLDFGLTK++SSSMKQ+LAKMF A AEGDHVALLS+F+EMGL+LRLD PEQA
Sbjct: 299 KEPPHRPILLDFGLTKRISSSMKQSLAKMFLATAEGDHVALLSSFSEMGLKLRLDFPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNP--------- 411
M+ ++FFRTS A+EA E K+L EQRA+N+KV+QEKM L+QKEVKRFNP
Sbjct: 359 MDFISVFFRTSTSASEAAEYAKSLGEQRARNMKVLQEKMNLSQKEVKRFNPASPSITLFY 418
Query: 412 ----VDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAE 467
+DAFPGD+VIFSRV+ LLRGLS+T++ RIVY D+MRPFAE VLQ I K PS +A+
Sbjct: 419 FYQYIDAFPGDMVIFSRVIGLLRGLSTTLDARIVYHDVMRPFAESVLQDKIAKGPSDNAQ 478
Query: 468 WIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQP 527
WI P+HSDVEAKLR LVELGND KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQP
Sbjct: 479 WINDTPVHSDVEAKLRQILVELGNDDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQP 538
Query: 528 DSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL 587
DSLFPVFSVTKGI AGMLHWLVDNGKL L ENIANIWPEF +NGK+LIKVHHVLNHTSGL
Sbjct: 539 DSLFPVFSVTKGIAAGMLHWLVDNGKLNLNENIANIWPEFGTNGKNLIKVHHVLNHTSGL 598
Query: 588 HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKK 647
N +L ENPLL+ DWDECL RIA+SAPETEPGQEQLYHYLSFGWLCGGIIE ASGKK
Sbjct: 599 QNALANLREENPLLMADWDECLKRIAMSAPETEPGQEQLYHYLSFGWLCGGIIEHASGKK 658
Query: 648 FQEILEEGIIQPLSID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQ 698
FQEILEE I++PL+I+ GVESRLASLT+D DD +K+S I +RP+ PS+FQ
Sbjct: 659 FQEILEEAIVRPLNIEGELYVGIPPGVESRLASLTLDKDDFSKLSKIASRPE--FPSTFQ 716
Query: 699 PDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKP 758
P+ ISQL PA+FNMLN+RRAIIP ANGHCSARALARYYAAL DGG+VPPPHS LS P
Sbjct: 717 PENISQLVTAVPALFNMLNVRRAIIPGANGHCSARALARYYAALVDGGLVPPPHSSLSMP 776
Query: 759 PLGSHPHIPKFPSHETSKKQKGTKKELL-AALKNKTNNSEHGHKYTKDLEGGSHIRTASG 817
PLG+HPHIPKFPS TSKKQKG K + +A K K N E ++ D + G ++
Sbjct: 777 PLGTHPHIPKFPSEITSKKQKGKKIKAAGSASKKKGNGYELKMNHSNDFKDGGE---SNS 833
Query: 818 DTYARLINIETSSSNTSTT---DSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLAL 874
D Y RL N SS++S + ++ + +N KIFNNPRIHD F+GVG+Y +L L
Sbjct: 834 DGYTRLANDSAGSSSSSDASPPKGFAASENSRQNNANKIFNNPRIHDEFMGVGEYRNLVL 893
Query: 875 PNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIH 934
PNG+FGLGF+R+++ DGS+ GFGHSGMGGSTGFCD+ NRFAIAVTLNKMS G T RI+
Sbjct: 894 PNGKFGLGFRRFSSSDGSFYGFGHSGMGGSTGFCDIKNRFAIAVTLNKMSLGTATRRIVQ 953
Query: 935 FVCSELNLPVPEDYLRFAEVEHDTPQDLGQPLIN 968
FVCSELN+P+P+++ +E D + +PLIN
Sbjct: 954 FVCSELNVPLPDEFAVLSETAPDEELSIARPLIN 987
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334187920|ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] gi|332005982|gb|AED93365.1| ABC1 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1392 bits (3602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1009 (67%), Positives = 812/1009 (80%), Gaps = 57/1009 (5%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MG GNIYRRRM VFS+AILIYLDYK VQQ+EKWIKKSK+ ALW +AH+RNAKRVLNLI++
Sbjct: 48 MGLGNIYRRRMKVFSIAILIYLDYKGVQQKEKWIKKSKVPALWDKAHDRNAKRVLNLIVE 107
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ---------------- 104
LEGLWVKLGQYLSTRADVLP+ YISLL QLQDSLPPRP+QEV +
Sbjct: 108 LEGLWVKLGQYLSTRADVLPQAYISLLTQLQDSLPPRPLQEVCKIYLNVNIRGYTKKEKY 167
Query: 105 ---------------TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKV 149
TIERE G SM +F DFV+ PLATASIAQVHRATL +G+ VVVKV
Sbjct: 168 FFDIMSMWYDFKVCRTIERELGNSMDVLFTDFVDEPLATASIAQVHRATLANGQDVVVKV 227
Query: 150 QHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVS 209
QH GI+ IILEDLKNAKSIVDWIAWAEPQY+FNP+IDEWCKEAP+ELDFN EAENTR VS
Sbjct: 228 QHDGIRAIILEDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAPRELDFNIEAENTRTVS 287
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK 269
NLGCK +++ + A VDVLIP++IQSSE+VLILE+MDG+RLND ESL+AFGV+KQK
Sbjct: 288 GNLGCKKTNDEV--RSANRVDVLIPDIIQSSESVLILEYMDGVRLNDVESLDAFGVDKQK 345
Query: 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 329
+VEEITRAYAHQI+VDGFFNGDPHPGNFLVSK+P HRPILLDFGL+KK+S S+KQALAKM
Sbjct: 346 IVEEITRAYAHQIFVDGFFNGDPHPGNFLVSKEPQHRPILLDFGLSKKISHSLKQALAKM 405
Query: 330 FFAAAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRA 389
F A+AEGD VALLSAFAEMGL+LRLD+P+QAM V+ LFFR+S P++EA +T K L++QR
Sbjct: 406 FLASAEGDQVALLSAFAEMGLKLRLDMPDQAMSVAGLFFRSSTPSSEAMKTFKTLNDQRV 465
Query: 390 KNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPF 449
+N+KVIQEKM+LNQKEVKRFNP+DAFPGDIVIF+RV+NLLRGLSSTMNVRIVYLDIMRPF
Sbjct: 466 QNMKVIQEKMQLNQKEVKRFNPIDAFPGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPF 525
Query: 450 AEYVLQVGINKEPSVSAEWIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVI 509
AE VL I++ P+V A WI+ PIHSDVE+K+R L ELG+ KILGIQVCAYKDG+VI
Sbjct: 526 AESVLLGSISRGPTVDAHWIHDSPIHSDVESKVRKLLAELGSIQKILGIQVCAYKDGKVI 585
Query: 510 IDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKS 569
IDT+AG+LGRYDPRPVQPDSLFPVFSVTKG+TAGM+HWLVD KL+L++ +AN+WP F S
Sbjct: 586 IDTAAGVLGRYDPRPVQPDSLFPVFSVTKGVTAGMIHWLVDKRKLQLDQTVANMWPGFGS 645
Query: 570 NGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHY 629
NGKD IKVHHVLNHTSG+ N S D ENPLLICDWDECL RIA S+PETEPG +Q YHY
Sbjct: 646 NGKDTIKVHHVLNHTSGMQN-SFDPVGENPLLICDWDECLKRIANSSPETEPGSQQSYHY 704
Query: 630 LSFGWLCGGIIERASGKKFQEILEEGIIQPLSID---------GVESRLASLTIDTDDLN 680
L+FGWLCGGI+E ASGKK QEILEE I++PL+ID GVESRLA+LT DTD+++
Sbjct: 705 LTFGWLCGGILEYASGKKLQEILEESIVKPLNIDGELYIGIPPGVESRLATLTFDTDEMS 764
Query: 681 KVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYA 740
K+S I ++P+ LPS+FQPDKI Q+A P +FN LN+RRAIIPAANGHCSARALARYYA
Sbjct: 765 KLSSIASQPE--LPSTFQPDKIIQMATNLPVLFNTLNVRRAIIPAANGHCSARALARYYA 822
Query: 741 ALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGH 800
LADGG+VPPPHS LS+PPLGSH H+PKF S + + K+K KE+ A K K+ + +
Sbjct: 823 TLADGGLVPPPHSSLSQPPLGSHTHVPKFTSLKDTTKKK-KGKEMAATEKGKSKDHQERK 881
Query: 801 KY-TKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRI 859
Y K S R ++ ++ ARL++ +S+ T N+D+ Q ++ +F+NPRI
Sbjct: 882 LYDEKQFMSASSSRESNTESLARLVDTNSSAGKTEI-----NSDDHQ-HDIHNMFSNPRI 935
Query: 860 HDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVT 919
HDAF+G GDY L +P+G+FGLGFKR ++DGS +GFGHSG+GGSTGFCD+NNRF+IAVT
Sbjct: 936 HDAFMGAGDYSGLVVPDGKFGLGFKRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVT 995
Query: 920 LNKMSFGATTGRIIHFVCSELNLPVPEDYLRFAEVEHDTPQDLGQPLIN 968
LNKMS G T I+ VCSELN+P+P+D+ ++ D+ +G PLIN
Sbjct: 996 LNKMSMGGVTANIVKLVCSELNIPLPKDFA--TDIGADS--QMGTPLIN 1040
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552616|ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802638 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1377 bits (3564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/983 (69%), Positives = 810/983 (82%), Gaps = 33/983 (3%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWG+IY+RR+ VF+MA++IYLDYK+VQQREKW KS+ ++LW++AHERNAKRVLNLII+
Sbjct: 1 MGWGDIYKRRVRVFTMAVIIYLDYKSVQQREKWTSKSRQASLWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
+EGLWVKLGQY+STRADVLP YI LLKQLQDSLPPRP++EV TI++E G+SM +F D
Sbjct: 61 MEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFAD 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 121 FVNKPLATASIAQVHRATLLNGHEVVVKVQHDGIKTIILEDLKNAKSIVDWIAWAEPQYN 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N + A VDVLIP+VIQS+
Sbjct: 181 FNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMR-ANRVDVLIPDVIQST 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VL+LE+MDGIRLND ESLEA+GV+KQK+VEEITRAYAHQIY+DGFFNGDPHPGNFLVS
Sbjct: 239 EKVLVLEYMDGIRLNDLESLEAYGVDKQKLVEEITRAYAHQIYIDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LRLD+PEQA
Sbjct: 299 KESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+ +FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVDAFPGDIV
Sbjct: 359 MEVTAVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVDAFPGDIV 418
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF RVLNLLRGLSSTMNV+IVY+DIMRPFAE VL+ I+K PSV+ WI+ P+HSDVE+
Sbjct: 419 IFGRVLNLLRGLSSTMNVQIVYMDIMRPFAESVLRGYISKGPSVNDRWIFDSPVHSDVES 478
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
LR L+E+GN+ KILGIQVCAYKDGEVIIDT+AG+LG+YDPRPV+PDSLFPVFSVTKGI
Sbjct: 479 MLRQLLIEMGNNDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPVFSVTKGI 538
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVDNG+L LEEN+ANIWP F SNGKD+IKVHHVLNHTSGLHN ++ E+PL
Sbjct: 539 TAGMIHWLVDNGQLNLEENVANIWPAFGSNGKDVIKVHHVLNHTSGLHNAMGSIAQEDPL 598
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
L+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILEE I++PL
Sbjct: 599 LMFDWDGCLNRICQSVPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILEEAIVRPL 658
Query: 661 SID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
I+ GVESRLA+LT+DT DL+KVS + NRPD LPS+FQP +I+QLA P
Sbjct: 659 HIEGELYVGIPPGVESRLAALTVDTADLSKVSALANRPD--LPSTFQPQQIAQLATSLPV 716
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKF-- 769
FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHPHIPK
Sbjct: 717 AFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHPHIPKLSS 776
Query: 770 -PSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIET 828
P ++K G +K+ + + TN+ E Y S R N E+
Sbjct: 777 SPKPPKTRKCIGRRKQATSTSVSTTNSYEKVSSYDD-----------SEANKGRNTNSES 825
Query: 829 SSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNT 888
SS + +++ ISN +S K++ NPRI D FLG G+Y +LALP FGLGFKR+ +
Sbjct: 826 SSGDDASSSRISNN--LRSHVAGKVYKNPRIIDEFLGTGEYTNLALPGEGFGLGFKRFTS 883
Query: 889 RDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDY 948
+DGS I FGHSGMGGSTGFCDV N F+IAVTLNKMSFG TG+I+ VCSELN+PVP+D+
Sbjct: 884 KDGSSIAFGHSGMGGSTGFCDVTNNFSIAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDF 943
Query: 949 LRFAEVEHDTPQD---LGQPLIN 968
LRFA VE P + +G+P+IN
Sbjct: 944 LRFA-VEQSGPDEQLSMGRPIIN 965
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563711|ref|XP_003550103.1| PREDICTED: uncharacterized protein LOC100775929 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1376 bits (3562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/984 (69%), Positives = 808/984 (82%), Gaps = 34/984 (3%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWG+IY+RR+ VF+MA+++YLDYK VQQREKW KS+ +ALW++AHERNAKRVLNLII+
Sbjct: 1 MGWGDIYKRRVRVFTMALIVYLDYKGVQQREKWTSKSRQAALWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
+EGLWVKLGQY+STRADVLP YI LLKQLQDSLPPRP++EV TI++E G+SM +F D
Sbjct: 61 MEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFAD 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 121 FVNEPLATASIAQVHRATLLNGLEVVVKVQHDGIKTIILEDLKNAKSIVDWIAWAEPQYN 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N A VDVLIP+VIQS+
Sbjct: 181 FNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMS-ANRVDVLIPDVIQST 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VL+LE+MDGIRLND ESL+A+GV+KQK+VEEITRAYAHQIYVDGFFNGDPHPGNFLVS
Sbjct: 239 EKVLVLEYMDGIRLNDLESLDAYGVDKQKLVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LRLD+PEQA
Sbjct: 299 KESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+T+FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVDAFPGDIV
Sbjct: 359 MEVTTVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVDAFPGDIV 418
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF RVLNLLRGLSSTMNVRIVY+DIMRPFAE VL I+K PS++ WI+ P+HSDVE+
Sbjct: 419 IFGRVLNLLRGLSSTMNVRIVYMDIMRPFAESVLSGYISKGPSLNDRWIFDSPVHSDVES 478
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
KLR L+E+GN+ KILGIQVCAYKDGE IIDT+AG+LG+YDPRPVQPDSLFPVFSVTKGI
Sbjct: 479 KLRQLLIEMGNNDKILGIQVCAYKDGEAIIDTAAGVLGKYDPRPVQPDSLFPVFSVTKGI 538
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVDNG+L LEEN+A IWP F+SNGKD+IKVHHVLNHTSGLHN ++ E+PL
Sbjct: 539 TAGMIHWLVDNGQLNLEENVATIWPAFRSNGKDVIKVHHVLNHTSGLHNAMGGIAQEDPL 598
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
L+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILEE I++PL
Sbjct: 599 LMLDWDGCLNRICQSIPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILEEAIVRPL 658
Query: 661 SID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
I+ GVESRLA+LT+DT +L+K+S + NR D LPS+FQP +I+QLA P
Sbjct: 659 HIEGELYVGIPPGVESRLAALTVDTAELSKISALANRAD--LPSTFQPQQIAQLATTLPV 716
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 771
FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHPHIPK S
Sbjct: 717 AFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHPHIPKLSS 776
Query: 772 HE----TSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIE 827
+ ++K G + + + + TN+ E + +D + R N E
Sbjct: 777 SQKPPIKNRKCIGRRTQATSPSVSTTNSYEKVSSH-EDFDANE----------GRNTNSE 825
Query: 828 TSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYN 887
+SS ++ I N ++ RK++ NPRI D FLG G+Y +LALP FGLGFKR++
Sbjct: 826 SSSGGDDSSSRIGNN--LRTHVARKVYKNPRIIDEFLGTGEYENLALPGESFGLGFKRFS 883
Query: 888 TRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPED 947
++DGS I FGHSGMGGSTGFCDV N F++AVTLNKMSFG TG+I+ VCSELN+PVP+D
Sbjct: 884 SKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVTLNKMSFGGVTGKIVQLVCSELNIPVPDD 943
Query: 948 YLRFAEVEHDTPQD---LGQPLIN 968
+LRFA VE P + +G+P+IN
Sbjct: 944 FLRFA-VEQSGPDEQLSMGRPIIN 966
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121392|ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|222872618|gb|EEF09749.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1362 bits (3524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/959 (71%), Positives = 799/959 (83%), Gaps = 18/959 (1%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISA-LWQRAHERNAKRVLNLII 59
MGWGNIYRRR+ VFS+A+LIYLDYK +RE+++K ++ S LW+RAHERNAKRV N++I
Sbjct: 1 MGWGNIYRRRVKVFSLAVLIYLDYK---KREEFMKNNEKSEELWKRAHERNAKRVRNMMI 57
Query: 60 KLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFM 119
+L GLWVKLGQYLSTRADVLP YISLLKQLQDSLPPRP+QEV +TIERE G+SM +F+
Sbjct: 58 QLGGLWVKLGQYLSTRADVLPSAYISLLKQLQDSLPPRPLQEVCRTIERELGKSMKEIFL 117
Query: 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179
DF E LATASIAQVHRATL+DGR+VVVKVQH+ IK IILEDLK+AKSIVDWIAWAEPQY
Sbjct: 118 DFDENSLATASIAQVHRATLIDGREVVVKVQHEDIKAIILEDLKDAKSIVDWIAWAEPQY 177
Query: 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS 239
+FNP+IDEWCKE PKELDFN EAENTR VS NLGC NK++ + K +VDVLIPEVIQS
Sbjct: 178 NFNPMIDEWCKETPKELDFNHEAENTRTVSKNLGCTNKYD--SDKSINQVDVLIPEVIQS 235
Query: 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLV 299
+E VLILE+MDGIRLND ESLEA G NKQK+VEEITRAYAHQIYVDGFFNGDPH GNFLV
Sbjct: 236 TEKVLILEYMDGIRLNDLESLEACGANKQKIVEEITRAYAHQIYVDGFFNGDPHTGNFLV 295
Query: 300 SKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQ 359
SK+PPHRPILLDFG TKK+SSSMKQ+LAKMF A AEGDHVALLS+FAEMGL+LRLD+PEQ
Sbjct: 296 SKEPPHRPILLDFGFTKKISSSMKQSLAKMFLATAEGDHVALLSSFAEMGLKLRLDLPEQ 355
Query: 360 AMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDI 419
AM+V+++FFR S PANEA E K L+EQR +N+KV+QEKM L+QKEVKRFNP+DAFPGD+
Sbjct: 356 AMDVTSIFFRASTPANEAAEYAKTLNEQRTRNMKVLQEKMNLSQKEVKRFNPIDAFPGDM 415
Query: 420 VIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVE 479
VIFSRV+NLLRGLSST+N RIVY DIMRPFAE VLQ I K PS +A+WIY P+HS+VE
Sbjct: 416 VIFSRVVNLLRGLSSTLNARIVYQDIMRPFAESVLQEKIAKGPSANAQWIYDTPVHSEVE 475
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
AKLR LVELGN+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLF VFSVTKG
Sbjct: 476 AKLRQILVELGNEDKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFSVFSVTKG 535
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 599
ITAGMLHWLVDNGKL L+E+IANIWPEF +NGK+LIKVHHVLNHT+GL N +L ENP
Sbjct: 536 ITAGMLHWLVDNGKLNLDESIANIWPEFGTNGKNLIKVHHVLNHTAGLQNALDNLRKENP 595
Query: 600 LLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQP 659
LL+ DWDECL +IA+S PETEPGQ QLYH+LSFGWLCGGIIE ASGKKFQEILEE ++P
Sbjct: 596 LLLTDWDECLKQIAMSEPETEPGQVQLYHFLSFGWLCGGIIEHASGKKFQEILEEAFVRP 655
Query: 660 LSID---------GVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITP 710
L+I+ GVESRLASLTID DD +K+S I + LPS+FQP+ ISQL
Sbjct: 656 LNIEGELYVGIPPGVESRLASLTIDKDDFSKLSKIGSLS--ALPSTFQPENISQLVTTLL 713
Query: 711 AVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFP 770
A+ NMLNIRRAIIPAANGHCSARALARYYAAL D G+VPPPHS LS PPLGSHPHIPKF
Sbjct: 714 ALSNMLNIRRAIIPAANGHCSARALARYYAALVDRGLVPPPHSSLSTPPLGSHPHIPKFS 773
Query: 771 SHETSKKQKGTK-KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETS 829
S TSK Q G K K + +A K K N E K +KD + R ++ D Y ++
Sbjct: 774 SEITSKMQNGKKSKAVGSASKKKENGYEQKTKQSKDSKDNGSGRESNSDGYTSTSGSSSA 833
Query: 830 SSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR 889
+ +S +S +++++ + +NV IFN+PRIHD F+G G+Y DL LPNG+FGLGFKR+++
Sbjct: 834 RNTSSPDNSSASSNDSRKNNVIWIFNDPRIHDQFMGTGEYSDLVLPNGKFGLGFKRFSSS 893
Query: 890 DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDY 948
DGS+ GFGHSG+GGSTGFCD+ NRFAIAVTLNK+SFG T +II FVCSELN+P+P+++
Sbjct: 894 DGSFSGFGHSGLGGSTGFCDIENRFAIAVTLNKISFGTATRKIIQFVCSELNVPLPDEF 952
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563713|ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775929 isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1360 bits (3521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1012 (67%), Positives = 808/1012 (79%), Gaps = 62/1012 (6%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWG+IY+RR+ VF+MA+++YLDYK VQQREKW KS+ +ALW++AHERNAKRVLNLII+
Sbjct: 1 MGWGDIYKRRVRVFTMALIVYLDYKGVQQREKWTSKSRQAALWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEV------------------ 102
+EGLWVKLGQY+STRADVLP YI LLKQLQDSLPPRP++EV
Sbjct: 61 MEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVFLQICYRRTAFRKQFCII 120
Query: 103 ----------SQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQ 152
TI++E G+SM +F DFV PLATASIAQVHRATL++G +VVVKVQH
Sbjct: 121 LLNLVYICKVYGTIQKELGKSMDELFADFVNEPLATASIAQVHRATLLNGLEVVVKVQHD 180
Query: 153 GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANL 212
GIKTIILEDLKNAKSIVDWIAWAEPQY+FNP+IDEWCKEAPKELDFN EAENTR V+ NL
Sbjct: 181 GIKTIILEDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAPKELDFNHEAENTRTVAKNL 240
Query: 213 GCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272
GC+N++ D N A VDVLIP+VIQS+E VL+LE+MDGIRLND ESL+A+GV+KQK+VE
Sbjct: 241 GCRNQY-DGNMS-ANRVDVLIPDVIQSTEKVLVLEYMDGIRLNDLESLDAYGVDKQKLVE 298
Query: 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFA 332
EITRAYAHQIYVDGFFNGDPHPGNFLVSK+ PHRPILLDFGLTKKLSS++KQALAKMF A
Sbjct: 299 EITRAYAHQIYVDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLA 358
Query: 333 AAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNL 392
+AEGDHVALLSAFAEMGL+LRLD+PEQAMEV+T+FFR + PANE +T+K+L++QR +N+
Sbjct: 359 SAEGDHVALLSAFAEMGLKLRLDIPEQAMEVTTVFFRATTPANEYHKTMKSLADQRDRNM 418
Query: 393 KVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEY 452
KVIQEKM L++KE+KRFNPVDAFPGDIVIF RVLNLLRGLSSTMNVRIVY+DIMRPFAE
Sbjct: 419 KVIQEKMNLDKKEMKRFNPVDAFPGDIVIFGRVLNLLRGLSSTMNVRIVYMDIMRPFAES 478
Query: 453 VLQVGINKEPSVSAEWIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDT 512
VL I+K PS++ WI+ P+HSDVE+KLR L+E+GN+ KILGIQVCAYKDGE IIDT
Sbjct: 479 VLSGYISKGPSLNDRWIFDSPVHSDVESKLRQLLIEMGNNDKILGIQVCAYKDGEAIIDT 538
Query: 513 SAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGK 572
+AG+LG+YDPRPVQPDSLFPVFSVTKGITAGM+HWLVDNG+L LEEN+A IWP F+SNGK
Sbjct: 539 AAGVLGKYDPRPVQPDSLFPVFSVTKGITAGMIHWLVDNGQLNLEENVATIWPAFRSNGK 598
Query: 573 DLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 632
D+IKVHHVLNHTSGLHN ++ E+PLL+ DWD CLNRI S PETEPG+EQ YHYLSF
Sbjct: 599 DVIKVHHVLNHTSGLHNAMGGIAQEDPLLMLDWDGCLNRICQSIPETEPGKEQFYHYLSF 658
Query: 633 GWLCGGIIERASGKKFQEILEEGIIQPLSID---------GVESRLASLTIDTDDLNKVS 683
GWLCGGIIE ASGKKFQEILEE I++PL I+ GVESRLA+LT+DT +L+K+S
Sbjct: 659 GWLCGGIIEHASGKKFQEILEEAIVRPLHIEGELYVGIPPGVESRLAALTVDTAELSKIS 718
Query: 684 GINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALA 743
+ NR D LPS+FQP +I+QLA P FN LN+RRAIIPAANGH SARALARYYAALA
Sbjct: 719 ALANRAD--LPSTFQPQQIAQLATTLPVAFNTLNVRRAIIPAANGHVSARALARYYAALA 776
Query: 744 DGGVVPPPHSRLSKPPLGSHPHIPKFPSHE----TSKKQKGTKKELLAALKNKTNNSEHG 799
DGG +PPPHS SKP LGSHPHIPK S + ++K G + + + + TN+ E
Sbjct: 777 DGGKIPPPHSSASKPVLGSHPHIPKLSSSQKPPIKNRKCIGRRTQATSPSVSTTNSYEKV 836
Query: 800 HKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRI 859
+ +D + R N E+SS ++ I N ++ RK++ NPRI
Sbjct: 837 SSH-EDFDANE----------GRNTNSESSSGGDDSSSRIGNN--LRTHVARKVYKNPRI 883
Query: 860 HDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVT 919
D FLG G+Y +LALP FGLGFKR++++DGS I FGHSGMGGSTGFCDV N F++AVT
Sbjct: 884 IDEFLGTGEYENLALPGESFGLGFKRFSSKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVT 943
Query: 920 LNKMSFGATTGRIIHFVCSELNLPVPEDYLRFAEVEHDTPQD---LGQPLIN 968
LNKMSFG TG+I+ VCSELN+PVP+D+LRFA VE P + +G+P+IN
Sbjct: 944 LNKMSFGGVTGKIVQLVCSELNIPVPDDFLRFA-VEQSGPDEQLSMGRPIIN 994
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 968 | ||||||
| TAIR|locus:2177487 | 479 | AT5G50330 [Arabidopsis thalian | 0.431 | 0.872 | 0.304 | 2.8e-44 | |
| TAIR|locus:2126793 | 481 | AT4G24810 [Arabidopsis thalian | 0.432 | 0.871 | 0.292 | 8.6e-42 | |
| UNIPROTKB|Q86TW2 | 530 | ADCK1 "Uncharacterized aarF do | 0.309 | 0.566 | 0.345 | 6.3e-41 | |
| TAIR|locus:2009764 | 551 | AT1G65950 [Arabidopsis thalian | 0.321 | 0.564 | 0.323 | 9.6e-40 | |
| TAIR|locus:2177719 | 761 | ATH13 "AT5G64940" [Arabidopsis | 0.403 | 0.513 | 0.296 | 1.6e-39 | |
| ZFIN|ZDB-GENE-080401-5 | 521 | adck1 "aarF domain containing | 0.324 | 0.602 | 0.315 | 4.2e-39 | |
| UNIPROTKB|E2RSN4 | 513 | ADCK1 "Uncharacterized protein | 0.308 | 0.582 | 0.336 | 5.4e-39 | |
| UNIPROTKB|F1SE04 | 455 | ADCK1 "Uncharacterized protein | 0.276 | 0.589 | 0.351 | 1.9e-38 | |
| UNIPROTKB|F1MYG8 | 523 | ADCK1 "Uncharacterized protein | 0.308 | 0.571 | 0.333 | 4e-38 | |
| UNIPROTKB|Q5ZMT7 | 519 | ADCK1 "Uncharacterized aarF do | 0.329 | 0.614 | 0.313 | 1.1e-37 |
| TAIR|locus:2177487 AT5G50330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 475 (172.3 bits), Expect = 2.8e-44, P = 2.8e-44
Identities = 141/463 (30%), Positives = 228/463 (49%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISA-LWQRAHERNAKRVLNLIIKLEGLW 65
++R + A IY YK Q R +K +K +W+R HE+ A ++ + L G +
Sbjct: 20 WQRSFQFWVRATNIYTGYKVFQLRVSLVKDAKKQEEMWERQHEQAADKIYFMCSDLGGFF 79
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+ Q L+ + D+ P ++ L L D P P + +E+E G+S+G +F F E P
Sbjct: 80 LKIAQLLA-KPDMAPAAWVKKLVTLCDQAPATPFDAIQLVLEKELGKSIGEIFETFDEKP 138
Query: 126 LATASIAQVHRATLVDGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183
L +ASIAQVHRA +V G + VVVKVQH GI+ +++ D++N + ++ + ++D +
Sbjct: 139 LGSASIAQVHRA-IVKGNKMNVVVKVQHPGIERLMMTDIRNLQLFALYMQRTDIKFDLHS 197
Query: 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET- 242
I E K+ E DF EA + L +E++ K P VL+P V++ T
Sbjct: 198 ITKEMEKQIGYEFDFKREANAMERIRCFL-----YENNKKSP-----VLVPRVLRDMVTK 247
Query: 243 -VLILEFMDGIR-LNDCESLEAFGVN---------KQKVVEEITRAYAHQIYVDGFFNGD 291
VL++E+++GI L+ + + G+N K ++ ++RAY I GFF+ D
Sbjct: 248 RVLVMEYINGIPILSIGDEMAKRGINPHGKIAEAAKHNILNSLSRAYGQMILKSGFFHAD 307
Query: 292 PHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351
PHPGN L+ K LLD+G K+L + ++ A + A A+ + + +F EMGL
Sbjct: 308 PHPGNILICKG--QEVALLDYGQVKELPNKLRLGYANLVIAMADNNASRVSQSFWEMGLH 365
Query: 352 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNP 411
+ E+ L A F+T K + Q V+Q + +K+
Sbjct: 366 TVAKCENEQQELLRL-------AQTLFDT-KMPTGQT-----VLQPFS--DDSSIKKI-A 409
Query: 412 VDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVL 454
V+ FP ++ R + LLRGLS M V + R AE L
Sbjct: 410 VETFPEELFSVLRTVVLLRGLSVGMGVNYSCAEQWRAMAEEAL 452
|
|
| TAIR|locus:2126793 AT4G24810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 452 (164.2 bits), Expect = 8.6e-42, P = 8.6e-42
Identities = 135/462 (29%), Positives = 220/462 (47%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWIKK-SKISALWQRAHERNAKRVLNLIIKLEGLW 65
++R ++ A IY YK Q R ++K +K +W+R HE A +V ++ L G +
Sbjct: 20 WQRSFQFWARATDIYTGYKVFQLRMNFVKDVNKHEEMWERQHELAAHKVYSMCSDLGGFF 79
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+ Q L + D+ P ++ L L D P P V +E+E G+S+ +F F E P
Sbjct: 80 LKIAQILG-KPDLAPAAWVRKLVTLCDQAPATPFDAVRVVLEKELGKSIEQVFETFDEKP 138
Query: 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184
L +ASIAQVHRA + D R VVVKVQH G++ +++ D++N + ++ + ++D +
Sbjct: 139 LGSASIAQVHRARVKGDKRDVVVKVQHPGVEKLMMVDIRNLQIFALYMQKTDIKFDLFSM 198
Query: 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET-- 242
E K+ E DF EA + L ++++ K P VL+P V + T
Sbjct: 199 TKEIEKQIGYEFDFKREANAMEKIRRFL-----YDNNRKSP-----VLVPRVFPNLVTRK 248
Query: 243 VLILEFMDGIRLNDC-ESLEAFGVN---------KQKVVEEITRAYAHQIYVDGFFNGDP 292
VL++EFM+GI + + + G+N K ++ +++AY I GFF+ DP
Sbjct: 249 VLVMEFMNGIPILSLGDEMAKRGINPHGKMAEAAKFNILHSLSQAYGQMILKSGFFHADP 308
Query: 293 HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 352
HPGN L+ K LLD+G K+L ++ A + A A+ + L +F E+G+
Sbjct: 309 HPGNILIGKGS--EVALLDYGQVKELPDHLRLGYANLVIAIADNNASLALQSFRELGIAT 366
Query: 353 RLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPV 412
+ E+ L A F+T L+ E +K+ + V
Sbjct: 367 VAKCKNEQQELLQL-------AKTMFDTEM---PPGTTTLQPFSE-----DSSIKKIS-V 410
Query: 413 DAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVL 454
+AFP ++ R + LLRGLS + + R AE L
Sbjct: 411 EAFPEELFSVLRTVVLLRGLSVGIGINYSCAQHWRAMAEEAL 452
|
|
| UNIPROTKB|Q86TW2 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 6.3e-41, P = 6.3e-41
Identities = 111/321 (34%), Positives = 178/321 (55%)
Query: 12 SVFSMAILIYLDY----KAVQQ-REKWIK-KSKISALWQRAHERNAKRVLNLIIKLEGLW 65
+V + A++ Y DY K+V E++++ +SK ++ + H R+A+R+ L G +
Sbjct: 42 AVATTAVISY-DYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANRGTF 100
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+GQ+L +LPE Y S LK L P +QE+ Q I + G+ + +F F +TP
Sbjct: 101 IKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDDTP 160
Query: 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 185
L TAS+AQVH+A L DGR V VKVQH ++ +D+ + +V + P+++F ++
Sbjct: 161 LGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLV 220
Query: 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLI 245
DE K P ELDF +E N VS L +H D K P D+ S+E VL+
Sbjct: 221 DEAKKNLPLELDFLNEGRNAEKVSQML----RHFDFLKVPRIHWDL-------STERVLL 269
Query: 246 LEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-- 303
+EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN LV K P
Sbjct: 270 MEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGT 329
Query: 304 -PHRPILLDFGLTKKLSSSMK 323
+LLD GL + L+ +
Sbjct: 330 GKAEIVLLDHGLYQMLTEEFR 350
|
|
| TAIR|locus:2009764 AT1G65950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 433 (157.5 bits), Expect = 9.6e-40, P = 9.6e-40
Identities = 107/331 (32%), Positives = 178/331 (53%)
Query: 6 IYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLW 65
+ R +++S+ + + DYK +R + L + H R+AKR+L L +G +
Sbjct: 56 VVRSSRAIYSITLTV-ADYKYTLRRLPADSDEYLQRLTE-VHSRSAKRILKLCESNKGFY 113
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
VK GQ+++T ++P+ Y L LQD P QE+ Q + G+++ +++ F E P
Sbjct: 114 VKAGQFVAT-LKLVPKEYSLALSSLQDKAVPCNFQEIKQVLTSNLGQNLTEIYLSFDEEP 172
Query: 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 185
+A ASIAQVH A L + ++V VKVQ+ G+K ++ D + +A P+Y F+ ++
Sbjct: 173 IAAASIAQVHHAVLKNHQEVAVKVQYPGLKQNMMLDTMIMSFLSKSVAKIFPEYRFDWLV 232
Query: 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET--V 243
E+ K +ELDF EA+N+ ++ N KH NK + IP V T V
Sbjct: 233 YEFVKSISQELDFLQEAKNSERIAKNF----KH---NKM------ITIPTVFSEFTTTQV 279
Query: 244 LILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP 303
L ++F G +++D ESL+ V+ +KV + + +A I+V GF +GDPHPGN LVS +
Sbjct: 280 LTMQFCKGFKVDDVESLKRTNVSPEKVAKVLVEVFAEMIFVHGFIHGDPHPGNILVSPEG 339
Query: 304 PH--RPILLDFGLTKKLSSSMKQALAKMFFA 332
+ +LLD G K L + ++ +++ A
Sbjct: 340 QNGFSLVLLDHGNCKTLDEAFRRDFCRLWEA 370
|
|
| TAIR|locus:2177719 ATH13 "AT5G64940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 451 (163.8 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 126/425 (29%), Positives = 213/425 (50%)
Query: 51 AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREF 110
AK + I++L ++K+GQ STR D+LP+ Y+ L +LQD +PP P +E E
Sbjct: 219 AKWLKENILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSATALSIVEEEL 278
Query: 111 GESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVD 170
G S+ +F F P+A AS+ QVHRA L G++VV+KVQ G+K + DLKN + I +
Sbjct: 279 GGSVEDIFDRFDYEPIAAASLGQVHRARL-KGQEVVLKVQRPGLKDLFDIDLKNLRVIAE 337
Query: 171 WIAWAEPQYD-----FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKP 225
++ +P+ D + I DE +E+D+ EA N+ + + N K + K P
Sbjct: 338 YLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANSELFANNF----KDLEYVKVP 393
Query: 226 AYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVD 285
+ + P+V L +E++ GI++N ++L+ GV+++++ +Y QI
Sbjct: 394 SIYWEYTTPQV-------LTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSH 446
Query: 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345
GFF+ DPHPGN V R I DFG+ +S ++++ L + F+ E D +L A
Sbjct: 447 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQAM 506
Query: 346 AEMGLRLRL-DVPEQAMEVSTLFF------RTSAPANEAFE--TVKNLSEQRAKNLKVIQ 396
+MG+ + D+ A+ + LFF R +A E E + L ++ + + Q
Sbjct: 507 VQMGVLVPTGDLT--AVRRTALFFLNSFEERLAAQRKEKEEIAAAEELGFKKPLSKEEKQ 564
Query: 397 EKMKLNQKEV-KRFNPVDA-----FPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFA 450
EK K + + + A FP R ++L G+ ++ R +I +P+A
Sbjct: 565 EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA 624
Query: 451 EYVLQ 455
+L+
Sbjct: 625 LELLR 629
|
|
| ZFIN|ZDB-GENE-080401-5 adck1 "aarF domain containing kinase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 4.2e-39, P = 4.2e-39
Identities = 108/342 (31%), Positives = 177/342 (51%)
Query: 5 NIYRRRMSVFSMAILIYLDY----KAVQQ--REKWIKKSKISALWQRAHERNAKRVLNLI 58
+I R + + A++ Y DY + VQ E W KSK+ H R+A+R+L+L
Sbjct: 34 SIVRFGRAAATTAVISY-DYLTTLRDVQYGTEEYWAVKSKV-------HRRSAERLLDLC 85
Query: 59 IKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMF 118
G ++K+GQ+L +LPE Y S LK L P ++ + Q I + G+ + +F
Sbjct: 86 CANRGTFIKVGQHLGALEYLLPEEYTSTLKILHSRAPHSSMEHIRQVIREDLGKELSDLF 145
Query: 119 MDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178
+ F ETP AS+AQVH+A L DGR V VKVQH ++ +D+ + ++ + W P
Sbjct: 146 IQFDETPHGAASLAQVHKAVLPDGRTVAVKVQHPKVQRQSSKDIVVMEFLLQVVHWLFPD 205
Query: 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238
+ F +++E K P ELDF +E N ++ L K K P D+
Sbjct: 206 FAFMWLVEEAKKNMPLELDFLNEGRNAEKIADML----KQFSFLKIPKIHWDL------- 254
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
S++ +L ++F +G ++ND E + G+N ++ + + Y+ I+V+GF + DPHPGN L
Sbjct: 255 STKRILTMDFAEGGQVNDREYMRRHGINVNEISRNLGKIYSEMIFVNGFVHCDPHPGNVL 314
Query: 299 VSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
V K P +LLD GL + L+ + +++ + +GD
Sbjct: 315 VRKSPESNKTEIVLLDHGLYQVLNQDFRLDYCRLWQSLIKGD 356
|
|
| UNIPROTKB|E2RSN4 ADCK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 426 (155.0 bits), Expect = 5.4e-39, P = 5.4e-39
Identities = 106/315 (33%), Positives = 171/315 (54%)
Query: 12 SVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQY 71
+V + A++ Y DY + + + + L + H R+A+R+ L G ++K+GQ+
Sbjct: 42 AVATTAVISY-DYLTSLRSVPYGSEEYLQ-LRSKVHLRSARRLCELCCANRGTFIKVGQH 99
Query: 72 LSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASI 131
L +LPE Y S LK L P +QEV Q I + G+ + +F+ F +TPL AS+
Sbjct: 100 LGALDYLLPEEYTSTLKVLHSQAPQSSIQEVRQVIREDLGKEIHDLFVSFDDTPLGAASL 159
Query: 132 AQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191
AQVH+A L DGR V VKVQH ++ +D+ + +V + P+++F ++DE K
Sbjct: 160 AQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKN 219
Query: 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDG 251
P ELDF +E N+ V+ L KH D K P D+ S++ VL++EF+DG
Sbjct: 220 LPLELDFLNEGRNSEKVAQML----KHFDFLKVPRIYWDL-------STKRVLLMEFVDG 268
Query: 252 IRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI--- 308
++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN LV K P +
Sbjct: 269 GQVNDRDYMEKNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKCPGTGKVEIV 328
Query: 309 LLDFGLTKKLSSSMK 323
LLD GL + L+ +
Sbjct: 329 LLDHGLYQVLTDEFR 343
|
|
| UNIPROTKB|F1SE04 ADCK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 99/282 (35%), Positives = 156/282 (55%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P +QEV Q
Sbjct: 5 QVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEVRQ 64
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+
Sbjct: 65 VIREDLGKEIHDLFVSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILL 124
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ +V + P+++F ++DE K P ELDF +E N V+ L KH D K
Sbjct: 125 MEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAQML----KHFDFLKV 180
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S++ VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V
Sbjct: 181 PRIHWEL-------STKRVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFV 233
Query: 285 DGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKKLSSSMK 323
+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 234 NGFVHCDPHPGNVLVRKRPGSEKAEIVLLDHGLYQVLTEEFR 275
|
|
| UNIPROTKB|F1MYG8 ADCK1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 4.0e-38, P = 4.0e-38
Identities = 105/315 (33%), Positives = 169/315 (53%)
Query: 12 SVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQY 71
+V + A++ Y DY + + + + L + H R+A+R+ L G ++K+GQ+
Sbjct: 42 AVATTAVISY-DYLTSLRSVPYGSEEYLQ-LRSKVHLRSARRLCELCCANRGTFIKVGQH 99
Query: 72 LSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASI 131
L +LPE Y S LK L P ++EV Q I + G+ + +F+ F +TPL AS+
Sbjct: 100 LGALDYLLPEEYTSTLKVLHSQAPQSSMKEVRQVIREDLGKEIHDLFLSFDDTPLGAASL 159
Query: 132 AQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191
AQVH+A L DGR V VKVQH ++ +D+ + +V + P+++F ++DE K
Sbjct: 160 AQVHKAVLRDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKN 219
Query: 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDG 251
P ELDF +E N V+ L KH D K P ++ S++ VL++EF+DG
Sbjct: 220 LPLELDFLNEGRNAEKVAQML----KHFDFLKVPHIYWEL-------STKRVLLMEFVDG 268
Query: 252 IRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI--- 308
++ND +E ++ ++ + R Y+ I+V+GF + DPHPGN LV K P +
Sbjct: 269 GQVNDRHYMERNKIDINEISRHLGRMYSEMIFVNGFVHCDPHPGNVLVRKRPDTGKVEIV 328
Query: 309 LLDFGLTKKLSSSMK 323
LLD GL + L+ +
Sbjct: 329 LLDHGLYQALTEEFR 343
|
|
| UNIPROTKB|Q5ZMT7 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 414 (150.8 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/335 (31%), Positives = 173/335 (51%)
Query: 6 IYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLW 65
+ R ++ + A++ Y DY R + L + H R+A+R+ L G +
Sbjct: 33 VVRVGRAIATTAVITY-DY-LTSLRNVPYGSEEYDFLKSQVHLRSAERLRELCCANRGTF 90
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+GQ+L +LPE Y LK L P QE+ Q I + G+ + +F+ F +TP
Sbjct: 91 IKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQEIEQVIREDLGKEIKELFVSFEDTP 150
Query: 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 185
L AS+AQVH+A L DGR V VK+QH ++ +D+ + ++ + P ++F ++
Sbjct: 151 LGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVKQIFPDFEFMWLV 210
Query: 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLI 245
+E K P ELDF +E N V+ L K+ + K P ++ S+ VL+
Sbjct: 211 EEAKKNLPLELDFLNEGRNAEKVAQML----KNFEFLKVPRIYWEL-------STRRVLL 259
Query: 246 LEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH 305
+EFM+G ++ND +E G++ ++ + + Y+ I+V+GF + DPHPGN LV K P
Sbjct: 260 MEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVLVKKCPDS 319
Query: 306 RP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
ILLD GL + LS S + +++ A + D
Sbjct: 320 GKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 968 | |||
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 5e-78 | |
| TIGR01982 | 437 | TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | 2e-63 | |
| PRK04750 | 537 | PRK04750, ubiB, putative ubiquinone biosynthesis p | 1e-50 | |
| pfam00144 | 326 | pfam00144, Beta-lactamase, Beta-lactamase | 7e-37 | |
| pfam03109 | 117 | pfam03109, ABC1, ABC1 family | 1e-26 | |
| COG1680 | 390 | COG1680, AmpC, Beta-lactamase class C and other pe | 3e-26 | |
| PRK03642 | 432 | PRK03642, PRK03642, putative periplasmic esterase; | 3e-08 | |
| PRK11289 | 384 | PRK11289, ampC, beta-lactamase/D-alanine carboxype | 1e-07 | |
| PRK13128 | 518 | PRK13128, PRK13128, D-aminopeptidase; Reviewed | 2e-05 | |
| PRK10662 | 378 | PRK10662, PRK10662, beta-lactam binding protein Am | 2e-05 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 7e-04 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 7e-04 | |
| PRK10359 | 232 | PRK10359, PRK10359, lipopolysaccharide core biosyn | 8e-04 | |
| pfam06176 | 229 | pfam06176, WaaY, Lipopolysaccharide core biosynthe | 0.001 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.003 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 5e-78
Identities = 130/427 (30%), Positives = 209/427 (48%), Gaps = 38/427 (8%)
Query: 32 KWIKKSKISALWQRAH--ERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQ 89
+ + S L E+ A+R+ + +L ++KLGQ LSTR D++P Y L +
Sbjct: 37 RLLSWLGKSKLASSEELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAK 96
Query: 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKV 149
LQD +PP P +E + IE E G + +F +F P+A+ASIAQVHRA L G +V VKV
Sbjct: 97 LQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKV 156
Query: 150 QHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCKEAPKELDFNSEAENTR 206
Q GI+ I DLK + + I P D ++DE+ K +ELD+ EA N
Sbjct: 157 QRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAE 216
Query: 207 IVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFG 264
N +D DV +P+V ++ VL +E++DGI+++D +L++ G
Sbjct: 217 RFRENF------KDDP-------DVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG 263
Query: 265 VNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324
++++++ E + RA+ Q+ DGFF+ DPHPGN LV D R +LLDFG+ +L ++
Sbjct: 264 IDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDG--RIVLLDFGIVGRLDPKFRR 321
Query: 325 ALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNL 384
LA++ A D+ + E+G VP T +A E +
Sbjct: 322 YLAELLLAFLNRDYDRVAELHVELGY-----VPPD-----TDRDPLAAAIRAVLEPIYGK 371
Query: 385 SEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLD 444
+ + + KL + V R P+ P ++V+ R L L+ G+ ++ R
Sbjct: 372 P---LEEISFGEILDKLFE--VARRFPMR-LPPELVLLQRTLLLVEGVGRQLDPRFNLWA 425
Query: 445 IMRPFAE 451
+ +P
Sbjct: 426 VAQPLLA 432
|
Length = 517 |
| >gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 2e-63
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 33/313 (10%)
Query: 42 LWQRAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRP 98
+ R R L + LE L ++K GQ LSTRAD+LP L LQD +PP
Sbjct: 38 PFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFD 97
Query: 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII 158
+ + IE G + +F +F E PLA ASIAQVHRA LVDG++V VKV GI+ I
Sbjct: 98 FKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTI 157
Query: 159 LEDLKNAKSIVDWIA-WAE------PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSAN 211
D+ ++ +A E + ++ E+ K +ELD EA N ++
Sbjct: 158 AADIA----LLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAAN----ASE 209
Query: 212 LGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQK 269
LG +N D V +PEV ++SE VL +E++DGI L+D +L+ G++++
Sbjct: 210 LG-ENFKNDPG--------VYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKA 260
Query: 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 329
+ E + R++ +Q+ DGFF+ D HPGN V KD + I LDFG+ +LS ++ LA++
Sbjct: 261 LAENLARSFLNQVLRDGFFHADLHPGNIFVLKDG--KIIALDFGIVGRLSEEDRRYLAEI 318
Query: 330 FFAAAEGD--HVA 340
+ D VA
Sbjct: 319 LYGFLNRDYRRVA 331
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437 |
| >gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 1e-50
Identities = 110/318 (34%), Positives = 153/318 (48%), Gaps = 32/318 (10%)
Query: 30 REKWIKKSKISALWQRAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISL 86
+ ++ + S W ++ R L + LE L +VK GQ LSTR D+ P
Sbjct: 28 LTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADE 87
Query: 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQV 145
L LQD +PP IE+ G + F DF PLA+ASIAQVH A L D GR+V
Sbjct: 88 LALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREV 147
Query: 146 VVKVQHQGIKTIILEDLKNAKSIVDWIA--WAE-----PQYDFNPIIDEWCKEAPKELDF 198
VVKV I +I DL + W+ + P+ ++ E+ K ELD
Sbjct: 148 VVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPR----EVVAEFEKTLHDELDL 203
Query: 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLND 256
EA N + N EDS+ + +PEV SETV+++E M GI ++D
Sbjct: 204 MREAANASQLRRNF------EDSD-------MLYVPEVYWDYCSETVMVMERMYGIPVSD 250
Query: 257 CESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGL 314
+L A G + + + E + Q++ DGFF+ D HPGN VS DPP P I LDFG+
Sbjct: 251 VAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310
Query: 315 TKKLSSSMKQALAKMFFA 332
L+ K+ LA+ F A
Sbjct: 311 VGSLNKEDKRYLAENFLA 328
|
Length = 537 |
| >gnl|CDD|215746 pfam00144, Beta-lactamase, Beta-lactamase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 7e-37
Identities = 75/284 (26%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGIT 541
L + EL G I G+ V +DG+V++D G+ RPV D+LF + SVTK T
Sbjct: 1 LDRLIRELMAQGGIPGVAVAVTRDGKVVVDR-GGVADLEGGRPVTADTLFRIASVTKTFT 59
Query: 542 AGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL-HNVSVDLSSENPL 600
A + LV+ GKL L++ ++ PEF GK I + +L HTSGL + D E
Sbjct: 60 AAAVLQLVERGKLDLDDPVSKYLPEFAGPGKGGITLRDLLTHTSGLPPLFAPDDLEEAA- 118
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
D E + +A P PG Y ++G L G ++ER +G+ ++E+L + I++PL
Sbjct: 119 --ADLAELVRALAALPPVWPPGTRWGYSNTAYGLL-GELLERVTGQSYEELLGDRILRPL 175
Query: 661 SIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRR 720
G+ +L +P P + + +
Sbjct: 176 -----------------------GMTE-TELGVPEPGDP-RDAAGYTGEGPPVRVSPGPL 210
Query: 721 AIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 764
A +AR LAR+ L G ++ L
Sbjct: 211 PAGAYAGLKSTARDLARFLLLLLGGLLLSAATLAQLTDWLRGGT 254
|
This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. Length = 326 |
| >gnl|CDD|111949 pfam03109, ABC1, ABC1 family | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 1e-26
Identities = 44/97 (45%), Positives = 58/97 (59%)
Query: 109 EFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSI 168
E G + +F +F E P+A ASIAQVHRA L DG +V VKVQ G+K I DLK K +
Sbjct: 2 ELGAPVEEVFAEFDEEPIAAASIAQVHRAVLKDGEEVAVKVQRPGVKKRIRSDLKLLKFL 61
Query: 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205
+ P +D + ++DE+ K P+ELDF EA N
Sbjct: 62 AKILKKFFPGFDLDWLVDEFRKSLPQELDFLREAANA 98
|
This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117 |
| >gnl|CDD|224594 COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 3e-26
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 26/282 (9%)
Query: 473 PIHSDVEAKLRDFLVELGNDGKI--LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSL 530
+ A+L + + G+ + DG+ ++ G+ PV P ++
Sbjct: 29 EVAGFDAARLDRLADAIMEEYGAPGPGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTV 88
Query: 531 FPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSN--GKDLIKVHHVLNHTSGLH 588
F + SVTK TA +L LV+ GKL L++ ++ PE K G I + +L HTSGL
Sbjct: 89 FRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGGAPITLRDLLTHTSGLP 148
Query: 589 NVSVDLSSENPLLICDWDECLNRIALSAPET--EPGQEQLYHYLSFGWLCGGIIERASGK 646
+ L+ D + L +A PE PG Y ++G L G I+ER +GK
Sbjct: 149 FPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYGLL-GAILERVTGK 207
Query: 647 KFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 706
+E+L E I +PL + + ++ P +F A
Sbjct: 208 PLEELLRERIFEPLGMTSTGFGPPPAPQARLAAGLAPAVGGGGEVDDPGTFGLGSALAGA 267
Query: 707 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVV 748
+ +AR +AR+ AL +GGV+
Sbjct: 268 G---------GLFS----------TARDMARFGQALLNGGVL 290
|
Length = 390 |
| >gnl|CDD|179620 PRK03642, PRK03642, putative periplasmic esterase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 3e-08
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 480 AKLR--DFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYD-------PRPVQPDSL 530
KL D + D G+ + KD +++ + G +YD P +++
Sbjct: 38 EKLNQMDRWISQQIDAGYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTM 97
Query: 531 FPVFSVTKGITAGM-LHWLVDNGKLKLEENIANIWPEFKS------NGKDLIKVHHVLNH 583
+ + S TK L LV GKL + + I+ P FK GK+ +++ +L+H
Sbjct: 98 YDLASNTKMYATNFALQKLVSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHH 157
Query: 584 TSGL--------HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635
++G V+ L S+ D L I + E +PG + +Y + + L
Sbjct: 158 SAGFPADPQYPNKAVAGALYSQ------DKSTTLEMIKKTPLEYQPGSKHIYSDVDY-ML 210
Query: 636 CGGIIERASGKKFQEILEEGIIQPL 660
G I+E +G+ +EE I +PL
Sbjct: 211 LGFIVESITGQPLDRYVEESIYRPL 235
|
Length = 432 |
| >gnl|CDD|236894 PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 523 RPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLN 582
+PV D+LF + SV+K TA + + G+L L + + PE K + D I + H+
Sbjct: 75 QPVTQDTLFELGSVSKTFTATLAGYAQARGELSLSDPASKYLPELKGSPFDGITLLHLAT 134
Query: 583 HTSGLHNVSVDLSSENPLLICDW----DECLNRIALSAPETEPGQEQLYHYLSFGWLCGG 638
+T+G L PL + D + L P PG ++LY S G L G
Sbjct: 135 YTAG------GL----PLQVPDEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG-LFGY 183
Query: 639 IIERASGKKFQEILEEGIIQPL 660
+ +A G+ F++++E+ + PL
Sbjct: 184 LAAKAMGQPFEQLMEQRLFPPL 205
|
Length = 384 |
| >gnl|CDD|171868 PRK13128, PRK13128, D-aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
L F+ + + K G V KDGEV++ + G + + P++ P+ SV+K
Sbjct: 7 PTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQ 66
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHN---VSVDLSS 596
T +L + ++ L+ +A +F+ V + N+ SGL + ++V L
Sbjct: 67 FTCAVLLDCIGEPEM-LDAALAAYLDQFE---DPRPAVRDLCNNQSGLRDYWALTV-LCG 121
Query: 597 ENPLLICDWDECLNRIA-LSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 655
P I D+ N + L PG Y +F + +IE+ +G+ ++L E
Sbjct: 122 AAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-ILADLIEQHTGRSLADLLAER 180
Query: 656 IIQPLSIDGVESRLASLTIDTDDLNKVSG 684
I P + + A L DT ++ +G
Sbjct: 181 IFAPAGM-----KTAELIPDTALFDECTG 204
|
Length = 518 |
| >gnl|CDD|236732 PRK10662, PRK10662, beta-lactam binding protein AmpH; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-05
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 523 RPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWP---EFKSNGKDLIKVHH 579
RP Q DSL + S+TK +T+ +L L D+G +KL + ++ P + I + +
Sbjct: 76 RP-QLDSLIRIASITKLMTSEVLVKLADDGTVKLTDPLSKYAPPGARVPTYNGQPITLLN 134
Query: 580 VLNHTSGLHNVSVDLSSENPLLICDWDECLNR---IALSAPETEPGQEQLYHYLSFGWLC 636
+ HTS L ++ P+ + W R ++ + + PG + Y L+F L
Sbjct: 135 LATHTSALPREQPGGAAHRPVFV--WPTREQRWKWLSTAKLKAAPGTQAAYSNLAFD-LL 191
Query: 637 GGIIERASGKKFQEILEEGIIQPL 660
+ +A+GK + ++L E I +PL
Sbjct: 192 ADALAKAAGKPYTQLLREKITRPL 215
|
Length = 378 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 225 PA-YEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQ 281
PA Y VD ++++E+++G L D + + G+ + ++ EI R H
Sbjct: 64 PAVYFVDP--------ENFIIVMEYIEGEPLKD--LINSNGMEELELSREIGRLVGKLHS 113
Query: 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314
G +GD N ++S + L+DFGL
Sbjct: 114 A---GIIHGDLTTSNMILSGG---KIYLIDFGL 140
|
Length = 211 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 7e-04
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 227 YEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQIYV 284
Y+VD +++E+++G L D +++ EI R H+
Sbjct: 65 YDVDP--------DNKTIVMEYIEGKPLKD-----VIEEGNDELLREIGRLVGKLHKA-- 109
Query: 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317
G +GD N +V D + L+DFGL K
Sbjct: 110 -GIVHGDLTTSNIIVRDD---KLYLIDFGLGKY 138
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
| >gnl|CDD|182407 PRK10359, PRK10359, lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 8e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 238 QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNF 297
+ ++++E+++G+ LND + K K+ I + H G +GDPH GNF
Sbjct: 114 YAHTYIMLIEYIEGVELNDMPEISE--DVKAKIKASIESLHQH-----GMVSGDPHKGNF 166
Query: 298 LVSKD 302
+VSK+
Sbjct: 167 IVSKN 171
|
Length = 232 |
| >gnl|CDD|114869 pfam06176, WaaY, Lipopolysaccharide core biosynthesis protein (WaaY) | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 243 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD 302
++++E+++G+ LND E K K+ + I + H G +GDPH GNF+VSKD
Sbjct: 119 IMLIEYIEGVELNDM--PEISEDVKAKIKQSIESLHQH-----GMVSGDPHRGNFIVSKD 171
|
This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system. Length = 229 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.003
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 230 DVLIPEVIQSSE----TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQIY 283
+ +P+V+ S E + L++E+++G L++ E K+ + E++ A HQ+
Sbjct: 52 GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEE-----KEDIAEQLAELLAKLHQLP 106
Query: 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313
+ +GD HPGN LV D ++D+
Sbjct: 107 LLVLCHGDLHPGNILV--DDGKILGIIDWE 134
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 968 | |||
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 100.0 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 100.0 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 100.0 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| KOG1236 | 565 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| PRK10662 | 378 | beta-lactam binding protein AmpH; Provisional | 100.0 | |
| PRK11289 | 384 | ampC beta-lactamase/D-alanine carboxypeptidase; Pr | 100.0 | |
| PRK03642 | 432 | putative periplasmic esterase; Provisional | 100.0 | |
| PRK13128 | 518 | D-aminopeptidase; Reviewed | 100.0 | |
| PF00144 | 329 | Beta-lactamase: Beta-lactamase; InterPro: IPR00146 | 100.0 | |
| KOG1234 | 363 | consensus ABC (ATP binding cassette) 1 protein [Ge | 100.0 | |
| COG1680 | 390 | AmpC Beta-lactamase class C and other penicillin b | 100.0 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 99.92 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.82 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.7 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.67 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.66 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.63 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.62 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.6 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.59 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.56 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.55 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.54 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.54 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.54 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.52 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.51 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.5 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.5 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.5 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.46 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.45 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.44 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.44 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.42 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.42 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.42 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.41 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.41 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.41 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.4 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.39 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.39 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.38 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.38 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.38 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.37 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.37 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.37 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.36 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.36 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.36 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.35 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.35 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.35 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.35 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.35 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.35 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.34 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.34 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.34 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.34 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.34 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.34 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.34 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.33 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.33 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.33 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 99.33 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.33 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.33 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.33 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.33 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.33 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.32 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.32 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.32 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.32 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.32 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.32 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 99.32 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.32 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.32 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.32 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.32 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.31 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.31 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.31 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.31 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.31 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.31 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.3 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.3 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.3 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.3 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.3 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.3 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.3 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.3 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.3 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.3 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.29 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.29 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.29 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.29 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.28 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.27 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.26 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.26 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.26 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.26 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.26 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.26 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.26 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.26 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.26 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.26 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.26 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.26 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.25 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.25 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.25 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.25 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.25 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.25 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.25 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.24 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.24 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.24 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.24 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.23 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.23 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.23 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.23 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.23 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.23 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.22 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.22 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.22 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.22 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.22 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.22 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.22 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.22 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.21 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.21 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.21 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.21 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.21 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.21 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.2 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.2 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.2 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.2 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.2 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.2 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.2 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.2 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.2 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.2 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.2 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.19 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.19 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.19 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.19 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.19 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.19 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.19 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.19 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.19 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.18 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.18 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.18 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.18 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.18 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.18 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.17 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.17 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.17 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.17 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.17 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.17 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.17 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.17 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.17 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.16 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.16 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.16 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.16 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.16 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.16 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.16 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.16 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.16 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.16 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.16 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.15 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.15 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.15 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.15 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.15 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.15 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.15 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.15 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.15 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.15 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.15 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.14 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.14 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.14 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.14 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.14 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.14 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.14 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.14 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.14 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.14 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.14 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.13 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.13 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.13 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.13 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.13 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.13 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.13 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.13 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.13 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.13 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.13 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.13 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.12 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.12 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.12 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.12 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.12 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.12 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.12 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.11 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.11 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 99.11 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.11 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.11 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.11 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.11 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.11 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.11 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.11 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.11 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.11 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.1 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.1 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.1 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.1 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.1 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.1 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.1 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.1 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.1 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.1 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.1 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.1 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.1 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.1 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.1 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.1 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.1 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.1 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.1 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.1 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.1 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.09 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.09 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.09 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.09 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.09 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.09 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.09 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.09 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.08 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.08 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.08 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.08 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.08 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.08 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.08 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.08 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.08 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.08 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.08 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.08 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.08 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.07 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.07 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.07 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.07 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.07 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.06 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.06 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.06 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.06 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.06 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.06 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.06 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.06 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.06 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.06 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.06 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.06 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.06 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.05 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.05 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.05 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.04 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.04 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.04 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.04 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.04 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.04 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.04 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.04 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.04 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.04 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.03 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.03 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.03 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.03 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.03 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.03 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.03 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.03 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.03 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.02 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.02 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.02 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.02 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.02 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.02 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.02 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.01 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.01 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.01 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.01 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.01 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 98.99 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 98.99 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 98.99 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 98.98 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 98.98 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 98.98 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 98.98 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 98.98 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 98.98 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 98.98 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 98.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 98.96 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 98.96 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 98.96 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 98.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 98.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 98.96 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 98.96 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 98.96 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 98.95 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 98.95 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 98.94 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 98.94 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 98.93 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 98.93 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 98.93 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 98.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 98.92 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 98.92 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 98.92 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 98.91 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 98.91 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 98.91 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 98.91 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 98.91 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 98.91 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 98.91 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 98.91 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 98.9 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 98.9 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 98.89 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 98.89 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 98.89 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 98.88 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 98.88 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 98.88 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 98.87 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 98.87 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 98.86 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 98.86 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 98.86 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 98.85 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 98.85 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 98.84 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 98.84 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 98.83 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 98.82 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 98.81 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.8 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.78 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 98.78 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 98.76 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 98.75 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 98.75 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.73 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 98.71 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 98.7 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.67 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 98.65 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 98.64 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 98.64 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 98.62 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 98.62 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 98.61 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 98.6 | |
| KOG2268 | 465 | consensus Serine/threonine protein kinase [Signal | 98.58 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 98.56 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 98.54 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 98.54 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 98.54 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 98.53 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 98.51 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.51 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 98.47 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 98.47 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 98.42 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 98.42 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 98.41 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.37 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 98.34 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 98.34 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 98.31 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 98.26 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 98.24 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.22 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 98.21 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 98.2 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 98.18 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.16 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 98.15 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 98.15 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 98.14 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 98.07 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 98.07 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 98.03 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 98.02 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 97.98 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 97.91 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 97.86 | |
| PRK06148 | 1013 | hypothetical protein; Provisional | 97.82 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 97.77 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 97.74 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 97.73 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 97.66 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 97.64 | |
| cd05152 | 276 | MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH | 97.64 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.64 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 97.6 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.56 | |
| COG1686 | 389 | DacC D-alanyl-D-alanine carboxypeptidase [Cell env | 97.53 | |
| COG2334 | 331 | Putative homoserine kinase type II (protein kinase | 97.47 | |
| PRK15442 | 284 | beta-lactamase TEM; Provisional | 97.45 | |
| PRK06149 | 972 | hypothetical protein; Provisional | 97.38 | |
| COG3001 | 286 | Uncharacterized protein conserved in bacteria [Fun | 97.35 | |
| PLN02236 | 344 | choline kinase | 97.28 | |
| PRK10793 | 403 | D-alanyl-D-alanine carboxypeptidase fraction A; Pr | 97.03 | |
| PRK11397 | 388 | dacD D-alanyl-D-alanine carboxypeptidase; Provisio | 97.0 | |
| PRK10001 | 400 | D-alanyl-D-alanine carboxypeptidase fraction C; Pr | 97.0 | |
| PF00768 | 240 | Peptidase_S11: D-alanyl-D-alanine carboxypeptidase | 96.96 | |
| PRK11768 | 325 | serine/threonine protein kinase; Provisional | 96.84 | |
| COG3173 | 321 | Predicted aminoglycoside phosphotransferase [Gener | 96.8 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 96.63 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 96.53 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 96.43 | |
| PRK11669 | 306 | pbpG D-alanyl-D-alanine endopeptidase; Provisional | 96.26 | |
| PF04655 | 253 | APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r | 96.19 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 96.12 | |
| KOG2269 | 531 | consensus Serine/threonine protein kinase [Signal | 95.95 | |
| PF01633 | 211 | Choline_kinase: Choline/ethanolamine kinase; Inter | 95.73 | |
| PTZ00384 | 383 | choline kinase; Provisional | 95.63 | |
| PTZ00296 | 442 | choline kinase; Provisional | 95.18 | |
| PRK10271 | 188 | thiK thiamine kinase; Provisional | 94.82 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 94.77 | |
| PF07914 | 414 | DUF1679: Protein of unknown function (DUF1679); In | 94.5 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 93.73 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 93.67 | |
| COG5072 | 488 | ALK1 Serine/threonine kinase of the haspin family | 92.52 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 92.2 |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-74 Score=662.95 Aligned_cols=386 Identities=32% Similarity=0.554 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCcccccccccc
Q 002092 44 QRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123 (968)
Q Consensus 44 ~~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~ 123 (968)
++..++.+++|+++|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++|++++|.+++++|.+|++
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~ 130 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEP 130 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCC---CCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+|+|||||||||+|++++|++|||||||||+++.+..|+.+|+.+++++.+..+. +++.++++|+.+.+..|+||++
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999999999999999999999999999999999987776 8999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
||+|+++|+++|+ +.+.++||+||+ |+++||||||++|.++++...+...|.+.+.+++.++++|
T Consensus 211 EA~n~~~~~~nf~-------------~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f 277 (517)
T COG0661 211 EAANAERFRENFK-------------DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF 277 (517)
T ss_pred HHHHHHHHHHHcC-------------CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH
Confidence 9999999999987 467899999997 8999999999999999999999999999999999999999
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcccC-CCcH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR-LDVP 357 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~-~~~~ 357 (968)
++|++++||||||||||||+|+.+ |+++++|||+++++++++|..++++++++.++|++.+++.+.++|.... .+..
T Consensus 278 ~~q~~~dgffHaDpHpGNi~v~~~--g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~ 355 (517)
T COG0661 278 LRQLLRDGFFHADPHPGNILVRSD--GRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRD 355 (517)
T ss_pred HHHHHhcCccccCCCccceEEecC--CcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchH
Confidence 999999999999999999999976 9999999999999999999999999999999999999999999999743 3555
Q ss_pred HHHHHHHHHHhhccCChhhhHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccC
Q 002092 358 EQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMN 437 (968)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~L~ 437 (968)
....++..++-...... +..++ ..+.+.+.+.. ..+++ +++|++++++.|++.++||++++|+
T Consensus 356 ~~~~~i~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~----~~~~~--~r~p~~l~ll~r~~~~vEg~~~~ld 418 (517)
T COG0661 356 PLAAAIRAVLEPIYGKP------LEEIS-----FGEILDKLFEV----ARRFP--MRLPPELVLLQRTLLLVEGVGRQLD 418 (517)
T ss_pred HHHHHHHHHHHhhhCCC------hhhcc-----HHHHHHHHHHH----HHhcC--ccCCHHHHHHHHHHHHHHHHHHhhC
Confidence 55555544433221111 01111 11122222222 33344 7899999999999999999999999
Q ss_pred cccccccccccchHHHHhhhcCCC
Q 002092 438 VRIVYLDIMRPFAEYVLQVGINKE 461 (968)
Q Consensus 438 p~~~~~~~~~pya~~~l~~~~~pk 461 (968)
|++|++.++.||+.++...+..++
T Consensus 419 p~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 419 PRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred ccccHHHHhhHHHHHHHHHhhhHH
Confidence 999999999999999999888876
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-70 Score=638.21 Aligned_cols=450 Identities=29% Similarity=0.389 Sum_probs=364.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhhhHHHHHH---HHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHH
Q 002092 7 YRRRMSVFSMAILIYLDYKAVQQRE-KWIKKSKISALWQ---RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEP 82 (968)
Q Consensus 7 ~~R~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~---~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~ 82 (968)
+.|..+++++++...+++...+... ++.........|. ......|++++.+|++|||+|||+||+||||+|++|++
T Consensus 4 ~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~ 83 (537)
T PRK04750 4 LFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPPD 83 (537)
T ss_pred hHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHH
Confidence 4577778887777666554322111 1111011101111 11225689999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCC-CCEEEEEEecCChhhhhHhh
Q 002092 83 YISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILED 161 (968)
Q Consensus 83 ~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~-G~~VAVKV~~p~i~~~~~~D 161 (968)
|+++|++|||+|||+|++++++++++++|.+++++|.+||++|+|||||||||+|++++ |++|||||+||++.+.+..|
T Consensus 84 ~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~D 163 (537)
T PRK04750 84 IADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDAD 163 (537)
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 99999999999999999999
Q ss_pred HHHHHHHHHHHHHhCC---CCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee
Q 002092 162 LKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238 (968)
Q Consensus 162 l~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~ 238 (968)
+++|+.++.++.+..+ .+++.++++|+.+.+.+|+||.+|++|+.+++++|. +.+.++||++|+
T Consensus 164 l~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~-------------~~~~v~VP~v~~ 230 (537)
T PRK04750 164 LALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFE-------------DSDMLYVPEVYW 230 (537)
T ss_pred HHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHcc-------------CCCCeecceeec
Confidence 9999999999986544 356788999999999999999999999999999886 245799999997
Q ss_pred --cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCC--CCceEEEeccc
Q 002092 239 --SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGL 314 (968)
Q Consensus 239 --~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~ 314 (968)
|+++||||||++|.++++...+...+.+++.+++..++.++.|+|.+||||||||||||+|+.++ +++++++|||+
T Consensus 231 d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 231 DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 99999999999999999987777788999999999999999999999999999999999998651 13899999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCccc-CCCcHHHHHHHHHHHhhcc-CChhhhHHHHHHHHHHHHhhH
Q 002092 315 TKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAMEVSTLFFRTS-APANEAFETVKNLSEQRAKNL 392 (968)
Q Consensus 315 ~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 392 (968)
++.++++.|..+++++.|+..+|++.+++.+.++|... ..+..++..++..++.... .+. ++++ ..
T Consensus 311 vg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l-------~~i~-----~~ 378 (537)
T PRK04750 311 VGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPL-------AEIS-----FG 378 (537)
T ss_pred EEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCCCc-------cccc-----HH
Confidence 99999999999999999999999999999999999864 3455555555544332211 111 1111 11
Q ss_pred HHHHHHHHhhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCcccccccccccchHHHHhhhcCCCCCccchh---h
Q 002092 393 KVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEW---I 469 (968)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~L~p~~~~~~~~~pya~~~l~~~~~pk~~~~~~~---l 469 (968)
+.+.+.+.. ..+|+ +++|++++++.|++.++||++++|||++|++++++||+.+++.++++|+....... .
T Consensus 379 ~~l~~l~~~----~r~~~--~~ip~~l~ll~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~~~~~~~~~~~~ 452 (537)
T PRK04750 379 HVLLRLFNT----ARRFN--VEIQPQLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPRALVRALKEEAP 452 (537)
T ss_pred HHHHHHHHH----HHHCC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 223333333 34455 78999999999999999999999999999999999999999999998866544221 1
Q ss_pred cccCCCchHHHHHHHHHH
Q 002092 470 YSKPIHSDVEAKLRDFLV 487 (968)
Q Consensus 470 ~~~P~~~~l~~~l~~~l~ 487 (968)
.......+++..+.+.++
T Consensus 453 ~~~~~~~~lP~~l~~~l~ 470 (537)
T PRK04750 453 FWAEKLPELPRLVHDSLR 470 (537)
T ss_pred HHHHHHHHhHHHHHHHHH
Confidence 122223345555555554
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=603.12 Aligned_cols=382 Identities=29% Similarity=0.490 Sum_probs=334.6
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccc
Q 002092 49 RNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLAT 128 (968)
Q Consensus 49 ~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgs 128 (968)
..|++++++|++|||+|||+||+||||+|+||++||++|++|||+|||+|++++++++++++|.+++++|.+||++|||+
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plas 127 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAA 127 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceee
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCC---CCCCcchHHHHHHhhhhccCcHHHHHHH
Q 002092 129 ASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENT 205 (968)
Q Consensus 129 aSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~l~~Eld~~~Ea~n~ 205 (968)
|||||||+|++++|++||||||||++.+.+..|+++++.++.++.+..+ .+++..+++|+...+.+|+||.+||+|+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~ 207 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANA 207 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 9999999999999999999999999999999999999999988886544 3577889999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.+|+++++ +.+.++||++|+ |+++||||||++|.+|.+.......+.+...++..+++.++.|+|
T Consensus 208 ~~~~~~~~-------------~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 208 SELGENFK-------------NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHhcC-------------CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99999876 356899999997 899999999999999999876655567788899999999999999
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCccc-CCCcHHHHHH
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAME 362 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~ 362 (968)
.+|+||||||||||+++.+ |+++|+|||+++.++++.+..+++++.++..+|++.+.+.+.++|+.. ..|.+.+..+
T Consensus 275 ~~g~~H~D~hPgNilv~~~--g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~ 352 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKD--GKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQA 352 (437)
T ss_pred hCCceeCCCCcccEEECCC--CcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Confidence 9999999999999999865 899999999999999999999999999999999999999999999863 3455555555
Q ss_pred HHHHHhhccCChhhhHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccccc
Q 002092 363 VSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVY 442 (968)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~L~p~~~~ 442 (968)
+..++....... +.+++ ..+.+.+.+.. ..+++ +++|++++++.|++.++||++++|+|++|+
T Consensus 353 ~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~----~~~~~--~~~p~~~~~l~r~l~~leg~~~~L~p~~~~ 415 (437)
T TIGR01982 353 IRAIGEPIFGQP------LKEIS-----VGRLLAGLFKI----TRDFN--MELQPQLLLLQKTLLTVEGVGRQLDPDLNM 415 (437)
T ss_pred HHHHHHHHhCCC------hhhCC-----HHHHHHHHHHH----HHHCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 554432211100 11111 11223333333 33343 689999999999999999999999999999
Q ss_pred ccccccchHHHHhhhcCCCC
Q 002092 443 LDIMRPFAEYVLQVGINKEP 462 (968)
Q Consensus 443 ~~~~~pya~~~l~~~~~pk~ 462 (968)
.++++||+.+.+.++++|+.
T Consensus 416 ~~~~~p~~~~~~~~~~~~~~ 435 (437)
T TIGR01982 416 WKVAEPFVKRWIRKRLGPKA 435 (437)
T ss_pred HHHHHHHHHHHHHhhcChhc
Confidence 99999999999999888754
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-67 Score=600.76 Aligned_cols=403 Identities=32% Similarity=0.523 Sum_probs=337.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCcc
Q 002092 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMG 115 (968)
Q Consensus 36 ~~~~~~~~~~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~ 115 (968)
.+...+.....|.+.|++|++++++|||+|||+||++|+|+|++|+||.++|+.|||++||+|++++.+++++|+|.+++
T Consensus 79 ~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie 158 (538)
T KOG1235|consen 79 SESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIE 158 (538)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHH
Confidence 34445566778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 116 GMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 116 ~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
++|.+||++|||+||+||||+|++++|+.||||||||++++.+..|+.+++.++..+.+..|.+++.++++|+++.+.+|
T Consensus 159 ~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~E 238 (538)
T KOG1235|consen 159 DIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQE 238 (538)
T ss_pred HHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
+||.+||+|+++++++|++.+ ....|+||+||+ |+++|||||||+|.+++|+..+++.++++..++..
T Consensus 239 LDF~~EA~Nae~~~~~f~~~~----------~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~ 308 (538)
T KOG1235|consen 239 LDFTKEAKNAERFRENFKDFS----------LLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNK 308 (538)
T ss_pred cchHHHHHhHHHHHHHHHhcc----------cccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHH
Confidence 999999999999999998422 123699999998 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCCCceEEecC--CCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
+.++|++|||.+||||||||||||+|+++ ++++++|+|||+++.++...|..|+++|+++...|...+...+..+|..
T Consensus 309 l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~ 388 (538)
T KOG1235|consen 309 LVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLG 388 (538)
T ss_pred HHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhccc
Confidence 99999999999999999999999999954 3578999999999999999999999999999999999999999999987
Q ss_pred cCCCcHHHHHHHHHHHhhccCChhhhHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchHHHHHHHHHHHHH
Q 002092 352 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRG 431 (968)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g 431 (968)
.+.+.+.++.++.....+...+.... ..+.........+.+.....+....+. +.++|..+.++.|+...+++
T Consensus 389 ~d~~~~~fa~~l~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------L~~~p~~i~li~k~~~l~r~ 461 (538)
T KOG1235|consen 389 LDDLYPLFATALTGRPWDSVIGAGIT-KYLKGLEEDADENQKIASAKFPGISQL------LRRMPREILLILKTNDLLRG 461 (538)
T ss_pred cchhhhhhHHHHhCCchhhccccchh-hhhhhhhhhhhhHHHHHHHHhhHHHHH------HHhchHhhhhhcccHHHHHh
Confidence 53444444444332222221110000 001111111111111222222211111 24679999999999999999
Q ss_pred hhhccCcccccccccccchHHHHh
Q 002092 432 LSSTMNVRIVYLDIMRPFAEYVLQ 455 (968)
Q Consensus 432 ~~~~L~p~~~~~~~~~pya~~~l~ 455 (968)
+...++...+....+..+...++.
T Consensus 462 ~~~~l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 462 LSSNLGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred HHHHhccccccchHHHHHHHHHHH
Confidence 999999998875455555555554
|
|
| >KOG1236 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=397.58 Aligned_cols=373 Identities=20% Similarity=0.291 Sum_probs=309.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCC-Cccccccccccccccccc
Q 002092 52 KRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGE-SMGGMFMDFVETPLATAS 130 (968)
Q Consensus 52 ~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~-~~~~~f~~~d~~plgsaS 130 (968)
+-|+.+++..||+|||+|||.|||+|+|++.+|..|++|+.+|+|+++...++.++.++|. .++++|.+|++.|||+||
T Consensus 122 ~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG~ 201 (565)
T KOG1236|consen 122 RLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSGC 201 (565)
T ss_pred HHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCcccccch
Confidence 5789999999999999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred eeEEEEEEeC-------C---------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCC--CCCCcchHHHHHHhh
Q 002092 131 IAQVHRATLV-------D---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP--QYDFNPIIDEWCKEA 192 (968)
Q Consensus 131 igqV~~A~l~-------~---------G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~--~~~~~~~~~e~~~~l 192 (968)
|||||+|+++ + .+.|||||.||++++++..|+.+|...++...+.+. -+++...++.|.-.+
T Consensus 202 IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~l 281 (565)
T KOG1236|consen 202 IAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVGL 281 (565)
T ss_pred hhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHHH
Confidence 9999999864 1 267999999999999999999999988887775432 246677899999999
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCC-CHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGV-NKQK 269 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~-~~~~ 269 (968)
..++|.++||.|+.+|..+|. +...|.+|.++. .++.||+-+|.+|.++....+....+. -.++
T Consensus 282 n~QvdL~~EA~hL~rF~~NF~-------------~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kk 348 (565)
T KOG1236|consen 282 NAQVDLRQEALHLPRFTNNFS-------------GSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKK 348 (565)
T ss_pred HhhcchhhhhhhhHHHHHhcc-------------cceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHH
Confidence 999999999999999999986 345688899886 899999999999999987754322111 2457
Q ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceEEecCCC-----------------------------------------CceE
Q 002092 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-----------------------------------------HRPI 308 (968)
Q Consensus 270 l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-----------------------------------------g~i~ 308 (968)
++...++++++|++.++|+|+|+|||||++...++ -+++
T Consensus 349 va~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lv 428 (565)
T KOG1236|consen 349 VAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLV 428 (565)
T ss_pred HHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEE
Confidence 78888899999999999999999999999985433 4689
Q ss_pred EEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCccc-CCCcHHHHHHHHHHHhhccCChhhhHHHHHHHHHH
Q 002092 309 LLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQ 387 (968)
Q Consensus 309 LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (968)
++|-|++..++++.+.++..++.|++..|...+.+.+.+..... ..|.+.++..+.+++...... ..++.+
T Consensus 429 flDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st-----~sl~tl--- 500 (565)
T KOG1236|consen 429 FLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARST-----KSLRTL--- 500 (565)
T ss_pred EecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhh-----cccCcC---
Confidence 99999999999999999999999999999988999988887653 445555666666655432200 011112
Q ss_pred HHhhHHHHHHHHHhhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCcccccccccccchHHH
Q 002092 388 RAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYV 453 (968)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~L~p~~~~~~~~~pya~~~ 453 (968)
.+...++|.+.+... ++ +++..+|.-++-++.+|||.+++|||++|+.....+|+...
T Consensus 501 --~i~~ll~em~tmvre----H~--V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l~~~ 558 (565)
T KOG1236|consen 501 --NIGDLLSEMFTMVRE----HH--VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLLNVA 558 (565)
T ss_pred --cHHHHHHHHHHHHHH----hh--eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHHHHH
Confidence 234455565555332 22 68999999999999999999999999999998555555544
|
|
| >PRK10662 beta-lactam binding protein AmpH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=409.93 Aligned_cols=248 Identities=17% Similarity=0.221 Sum_probs=195.0
Q ss_pred cCCCchHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHC
Q 002092 472 KPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDN 551 (968)
Q Consensus 472 ~P~~~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~ 551 (968)
.|....+.+.+++.+++.++++.+||++++|+++|++++ .+||+++...+.++++||+|+|||+||+|||+++++|+|+
T Consensus 25 ~~~~~~~~~~id~~~~~~~~~~~~pG~~v~V~~~g~i~~-~~~G~~~~~~~~~~t~dT~f~iaSiTK~fta~ai~~Lve~ 103 (378)
T PRK10662 25 AADPLLASDIVDRYAEHIFYGSGATGMALVVIDGNQRVF-RSYGETRPGNNVRPQLDSLIRIASITKLMTSEVLVKLADD 103 (378)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EeeeeccCCCCCCCCCCCeEEeeeecHHHHHHHHHHHHHC
Confidence 344567788899999999999999999999999999888 6899999999999999999999999999999999999999
Q ss_pred CCCCccCchhhhcccCc---cCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCC-CCHHHHHHHHHccCCCCCCCCceee
Q 002092 552 GKLKLEENIANIWPEFK---SNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLI-CDWDECLNRIALSAPETEPGQEQLY 627 (968)
Q Consensus 552 G~l~Ld~pv~~ylP~~~---~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~PG~~~~Y 627 (968)
|+|+||+||++|+|++. ....+.|||||||+||||++++........+... .+.++.++.+...++.++||+.|.|
T Consensus 104 G~l~lddpv~~ylP~~~~~~~~~~~~ITir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PGt~~~Y 183 (378)
T PRK10662 104 GTVKLTDPLSKYAPPGARVPTYNGQPITLLNLATHTSALPREQPGGAAHRPVFVWPTREQRWKWLSTAKLKAAPGTQAAY 183 (378)
T ss_pred CCCCCCCcHHHhCcccccCCCCCCCCccHHHHhhCcCCCCCCCCCccccCCcccCCCHHHHHHHHhcCCCcCCCCCceee
Confidence 99999999999999752 2222689999999999999976432211111111 2567788888888999999999999
Q ss_pred ccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhc
Q 002092 628 HYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 707 (968)
Q Consensus 628 Sn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (968)
||.||. |||.|||++||++|++|++++||+||||+++....... .....+.++..
T Consensus 184 sn~~~~-lLg~iie~vtg~~~~~~l~~~I~~PLGM~~T~~~~~~~----~~~~~a~g~~~-------------------- 238 (378)
T PRK10662 184 SNLAFD-LLADALAKAAGKPYTQLLREKITRPLGMKDTTFTPSPD----QCARLMVGEKG-------------------- 238 (378)
T ss_pred cchhHH-HHHHHHHHHhCCCHHHHHHHhCccccCCCCCcCCCChh----hhhhcccccCC--------------------
Confidence 999999 99999999999999999999999999999643321110 00011111100
Q ss_pred ccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCC
Q 002092 708 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750 (968)
Q Consensus 708 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~ 750 (968)
+..... .....|+||++||++||+||+++++++|.+..
T Consensus 239 --~~~~~~---~~~~~~aGGl~sT~~Dmak~~~~ll~~g~~~~ 276 (378)
T PRK10662 239 --ASPCNN---TLAAIGSGGVYSTPGDMMRWMQQFLSSDNYQR 276 (378)
T ss_pred --CCCCcc---ccccCCCCccccCHHHHHHHHHHHhCCCCCCc
Confidence 000000 01224889999999999999999999887654
|
|
| >PRK11289 ampC beta-lactamase/D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=409.18 Aligned_cols=240 Identities=22% Similarity=0.295 Sum_probs=193.6
Q ss_pred CchHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCC
Q 002092 475 HSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (968)
Q Consensus 475 ~~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l 554 (968)
..++.+.+++.+++.+++..+||++++|+++|++++ .+||+++...+.|+++||+|+|||+||+||++++++|+|+|+|
T Consensus 28 ~~~~~~~vd~~i~~~~~~~~~pG~~vaV~~~g~~~~-~~~G~~~~~~~~p~~~dT~f~iaSvTK~fTa~~i~~Lve~G~L 106 (384)
T PRK11289 28 PQQLKDIVDRTITPLMEEQDIPGMAVAVIYNGKPYY-FNYGVADKATGQPVTQDTLFELGSVSKTFTATLAGYAQARGEL 106 (384)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEE-EeeeecccccCCCCCCCCEEeeeechHHHHHHHHHHHHHCCCC
Confidence 347778999999999999999999999999999887 5899999999999999999999999999999999999999999
Q ss_pred CccCchhhhcccCccCCCCCCcHHHHhcCcCC-CCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHH
Q 002092 555 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 633 (968)
Q Consensus 555 ~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~ 633 (968)
+|||||.+|+|+|+...+++|||||||+|||| ++.... ....+.+++++.+...++.++||+.|.|||.||.
T Consensus 107 ~Lddpv~~ylP~~~~~~~~~ITir~LLtHtSGg~p~~~~-------~~~~~~~~l~~~l~~~~~~~~PG~~~~YSn~~y~ 179 (384)
T PRK11289 107 SLSDPASKYLPELKGSPFDGITLLHLATYTAGGLPLQVP-------DEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG 179 (384)
T ss_pred CCCCcHHHhCcccCCCCcCCeEHHHHhccccCCCcccCC-------cccCCHHHHHHHHHhCCCCCCCCCCeeechHHHH
Confidence 99999999999998666678999999999995 775322 1235678888998888999999999999999998
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccccc
Q 002092 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVF 713 (968)
Q Consensus 634 ~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (968)
|||.|||+++|++|+++++++||+||||+++....... .....+.+|.... .+...
T Consensus 180 -lLg~iiE~vtg~~~~~~l~~~I~~PLGM~~T~~~~~~~----~~~~~a~gy~~~g-------------------~~~~~ 235 (384)
T PRK11289 180 -LFGYLAAKAMGQPFEQLMEQRLFPPLGLTHTYINVPEA----EMADYAQGYNKEG-------------------KPVRV 235 (384)
T ss_pred -HHHHHHHHHHCcCHHHHHHHhhhhhcCCCccccCCCcc----ccccceeeeccCC-------------------Cceec
Confidence 99999999999999999999999999999643221110 0111111221100 01000
Q ss_pred ccccccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002092 714 NMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 749 (968)
Q Consensus 714 ~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~ 749 (968)
. +. ....|+||++||++||+||++++++++.++
T Consensus 236 ~-~~--~~~~~aGgl~ST~~Dl~~f~~all~~~~l~ 268 (384)
T PRK11289 236 N-PG--VLDAEAYGVKSTAADMLRFVQANLGPQDLD 268 (384)
T ss_pred C-CC--cccCCceeeEECHHHHHHHHHHHcCCCCCC
Confidence 0 00 011278999999999999999999987653
|
|
| >PRK03642 putative periplasmic esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=410.57 Aligned_cols=268 Identities=19% Similarity=0.294 Sum_probs=190.5
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCC-------CCCCCCCCCcceeecchHHHHH-HHHHHH
Q 002092 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRY-------DPRPVQPDSLFPVFSVTKGITA-GMLHWL 548 (968)
Q Consensus 477 ~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~-------~~~~~~~dt~f~i~S~SK~~ta-~~i~~l 548 (968)
+..+.+++.+++.+++ .+||++++|+++|+++++.+||+++.. .++++++||+|+|||+||+||+ +++++|
T Consensus 38 ~~~~~ld~~i~~~~~~-~~pG~sv~V~~~g~iv~~~~~G~~~~~~g~~~~~~~~~~t~dT~f~iaSiTK~ftt~~ai~~L 116 (432)
T PRK03642 38 EKLNQMDRWISQQIDA-GYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTMYDLASNTKMYATNFALQKL 116 (432)
T ss_pred HHHHHHHHHHHHHHhc-CCCeEEEEEEECCEEEEEeeeeeccccccccccccCCCCCCCCEEechhhhHHHHHHHHHHHH
Confidence 4457888888888875 499999999999999999999998853 3578999999999999999974 788999
Q ss_pred HHCCCCCccCchhhhcccCccC------CCCCCcHHHHhcCcCCCCCCCCCCcC--CCCcCCCCHHHHHHHHHccCCCCC
Q 002092 549 VDNGKLKLEENIANIWPEFKSN------GKDLIKVHHVLNHTSGLHNVSVDLSS--ENPLLICDWDECLNRIALSAPETE 620 (968)
Q Consensus 549 ve~G~l~Ld~pv~~ylP~~~~~------~~~~ITlr~LLsHtSGl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 620 (968)
+|+|+|+||+||.+|||+|... +++.|||||||+|||||+........ .......+.+++++.+...++.++
T Consensus 117 ve~G~l~ldd~v~~ylP~~~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 196 (432)
T PRK03642 117 VSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHHSAGFPADPQYPNKAVAGALYSQDKSTTLEMIKKTPLEYQ 196 (432)
T ss_pred HHCCCCCCcCcHHHhcccccccccccccCCCCCcHHHHhhCccCCCCCcccccccccccccccCHHHHHHHHhhCCCcCC
Confidence 9999999999999999999743 24679999999999999975321111 111122456778888888999999
Q ss_pred CCCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCcc
Q 002092 621 PGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPD 700 (968)
Q Consensus 621 PG~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (968)
||+.|.|||.+|. |||.|||+++|++|++|++++||+||||+++.......................+.... .+ +.
T Consensus 197 PG~~~~Ysn~~~~-lLg~iie~vtG~~~~~~~~e~If~PLgM~~t~~~~~~~~~~~~~~a~~~~~g~~~~~~~--~~-p~ 272 (432)
T PRK03642 197 PGSKHIYSDVDYM-LLGFIVESITGQPLDRYVEESIYRPLGLTHTVFNPLQKGFKPQQIAATELNGNTRDGVI--HF-PN 272 (432)
T ss_pred CCCceEecchHHH-HHHHHHHHHhCCCHHHHHHHhhhcccCCCcCcccCccccccHhhcCcccccCccccccc--cc-cc
Confidence 9999999999998 99999999999999999999999999999643221100000000000000000000000 00 00
Q ss_pred chhhhhcccccccccccc--cccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 701 KISQLAAITPAVFNMLNI--RRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~--~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
......... ..+...+ .+...|+||++||++||+||+++++++|.++++
T Consensus 273 -~~~~~~~~~-~~d~~~~~~~g~~~g~gGl~sTa~Dlakf~~~lL~~G~~~g~ 323 (432)
T PRK03642 273 -IRTNTLWGQ-VHDEKAFYSMGGVSGHAGLFSNTGDMAVLMQVMLNGGGYGNV 323 (432)
T ss_pred -cccCceeee-ecCcchhhhcCCcccccccccCHHHHHHHHHHHHhcCCcCCc
Confidence 000000000 0000111 123357889999999999999999999998776
|
|
| >PRK13128 D-aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=402.64 Aligned_cols=238 Identities=21% Similarity=0.275 Sum_probs=183.3
Q ss_pred HHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccC
Q 002092 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (968)
Q Consensus 479 ~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~ 558 (968)
.+.++..++.++++..+||++++|+++|+++++.+||+++..++.|+++||+|+|||+||+|||+++++|+++|+ +||+
T Consensus 6 ~~~l~~~v~~l~~~~~~Pg~avaVv~~G~iv~~~~~G~ad~~~~~p~t~dT~f~IaSiTK~fTa~~il~Lveeg~-~LDd 84 (518)
T PRK13128 6 LPTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQFTCAVLLDCIGEPE-MLDA 84 (518)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEechhhHHHHHHHHHHHHHhcCC-CCCC
Confidence 467778888888888899999999999999999999999999999999999999999999999999999999985 9999
Q ss_pred chhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCc--CCCCcCCCCHHHHHHHHHcc-CCCCCCCCceeeccCcHHHH
Q 002092 559 NIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS--SENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWL 635 (968)
Q Consensus 559 pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~PG~~~~YSn~~y~~l 635 (968)
||.+|||+|+. ..|||+|||+|||||+++..... ..++...+..++..+.+... ++.++||+.|.|||.||. |
T Consensus 85 pv~~yLPe~~~---~~iTvr~LLtHTSGl~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PGt~~~YSN~gy~-L 160 (518)
T PRK13128 85 ALAAYLDQFED---PRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-I 160 (518)
T ss_pred cHHHhcCCCCC---CCChHHHHhhCCCCCCccchhhhhcccccccCCCHHHHHHHHHhhccccCCCCCeeEEeCHHHH-H
Confidence 99999999975 35999999999999997643211 11222334566666666653 568999999999999998 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccccccc
Q 002092 636 CGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNM 715 (968)
Q Consensus 636 Lg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (968)
||.|||+++|++|+++++++||+||||+++.... +....+...+|..... .. ..+. .+
T Consensus 161 Lg~iIE~vtG~~~~~~l~~~If~PLGM~~T~~~~-----~~~~~~~a~Gy~~~~~----~~-----------~~p~-~~- 218 (518)
T PRK13128 161 LADLIEQHTGRSLADLLAERIFAPAGMKTAELIP-----DTALFDECTGYEGDTV----RG-----------FLPA-IN- 218 (518)
T ss_pred HHHHHHHHhCCCHHHHHHHhhhcccCCCccccCc-----cccccccccccccCCC----CC-----------cccC-cc-
Confidence 9999999999999999999999999999643211 1111111222221100 00 0010 00
Q ss_pred ccccccccCccceecCHHHHHHHHHHHHcCC
Q 002092 716 LNIRRAIIPAANGHCSARALARYYAALADGG 746 (968)
Q Consensus 716 ~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg 746 (968)
.....++||++||+.||+||+++++++.
T Consensus 219 ---~~~~~g~gGl~STa~Dma~~~~~l~~~~ 246 (518)
T PRK13128 219 ---RIHWLGDAGICASLDDMIAWEQFIDRTR 246 (518)
T ss_pred ---cccccCCcceEcCHHHHHHHHHHHHccC
Confidence 1123477899999999999999987543
|
|
| >PF00144 Beta-lactamase: Beta-lactamase; InterPro: IPR001466 This entry represents the serine beta-lactamase-like superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=382.87 Aligned_cols=243 Identities=28% Similarity=0.416 Sum_probs=188.6
Q ss_pred HHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 482 l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+++.+++.+++..+||++++|+++|+++++.++|+++...++++++||+|++||+||+||++++++|+++|+|+||+||.
T Consensus 1 ~~~~i~~~~~~~~~~g~a~~v~~~g~~~~~~~~G~~~~~~~~~~~~~t~~~i~SvsK~~ta~~v~~l~~~G~l~ld~~v~ 80 (329)
T PF00144_consen 1 IDRIIEQFMERYGIPGAAVAVIHNGKIVYEQYYGYADKQTGKPMTPDTVFRIGSVSKSFTATAVMQLIDEGKLDLDDPVS 80 (329)
T ss_dssp HHHHHHHHHHHTTESEEEEEEEETTEEEEEEEEEEEETTTTEEESTTSBEEEGGGHHHHHHHHHHHHHHTTSSGTTSBGG
T ss_pred ChHHHHHHHHhCCCcEEEEEEEECCEEEEEEEEeecccccCCCCCccceeeccCCcceeehhhhhhhhccccccccCccc
Confidence 46778888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHH
Q 002092 562 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 641 (968)
Q Consensus 562 ~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE 641 (968)
+|||++.....++|||+|||+|||||+++......... ....+++++.+...++.++||+.|.|||.+|. |||.|||
T Consensus 81 ~ylp~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll~~ile 157 (329)
T PF00144_consen 81 KYLPEFPDPGKEKITIRDLLTHTSGLPDYEASDELFGD--KPFWDELLQYLANLPLNFPPGTQFAYSNTNYQ-LLGEILE 157 (329)
T ss_dssp GTTTTGTTCGGTTEBHHHHHTTHSSHSSSSHTTTHTSH--HHHHHHHHHHHHHSCSSSSTTSEEE--HHHHH-HHHHHHH
T ss_pred ccccccccccccCcccceeceeecCCCccccccccccc--ccchhHHHhhhhcccccccccccccccCcchh-hhhHHHH
Confidence 99998777767789999999999999987432211110 01126899999999999999999999999998 9999999
Q ss_pred HHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccc-cCCCCCCCCCCCCCCccchhhhhcccccccccccccc
Q 002092 642 RASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVS-GINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRR 720 (968)
Q Consensus 642 ~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (968)
+++|++|+++++++||+||||+++..... ........ .+..... ...........
T Consensus 158 ~~tg~~~~~~~~~~i~~plgm~~t~~~~~-----~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~ 213 (329)
T PF00144_consen 158 RVTGKSFEELLQENIFQPLGMKHTGFGPP-----DAWPPRDAIGYYGNGD-------------------QASSPPGYNPN 213 (329)
T ss_dssp HHHTSHHHHHHHHHTTTTTTSTTEESSBG-----GGGGGGBEEEEEETTE-------------------EECEESCTTHH
T ss_pred HhccchhHHHHHHHHHHHhhccccccccc-----cccccccccccccccc-------------------ccccccccccc
Confidence 99999999999999999999995322111 11111100 0000000 00000000001
Q ss_pred cccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 721 AIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 721 ~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
...++||+++|++||+||++++++++.+...
T Consensus 214 ~~~~aggl~st~~Dlak~~~~~~~~~~~~~~ 244 (329)
T PF00144_consen 214 PYYGAGGLFSTARDLAKFGQLLLNGGLILSP 244 (329)
T ss_dssp HHTTTTTEEECHHHHHHHHHHHHHTGGSSCH
T ss_pred cccccCccchhhHHHHHHHHHHhCCCccchh
Confidence 1118999999999999999888888776655
|
It is a group of diverse group of sequences that includes D-alanyl-D-alanine carboxypeptidase B, aminopeptidase (DmpB), alkaline D-peptidase, animal D-Ala-D-Ala carboxypeptidase homologues and the class A and C beta-lactamases and eukaryotic beta-lactamase homologues which are variously described as: transesterases, non-ribosomal peptide synthetases and hypothetical proteins. Many are serine peptidases belonging to MEROPS peptidase families S11 (D-Ala-D-Ala carboxypeptidase A family) and S12 (D-Ala-D-Ala carboxypeptidase B family, clan SE). The beta-lactamases are classified as both S11 and S12 non-peptidase homologues; these either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Beta-lactamase catalyses the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins []. There are four groups, classed A, B, C and D according to sequence, substrate specificity, and kinetic behaviour: class A (penicillinase-type) is the most common []. The genes for class A beta-lactamases are widely distributed in bacteria, frequently located on transmissible plasmids in Gram-negative organisms, although an equivalent chromosomal gene has been found in a few species []. Class A, C and D beta-lactamases are serine-utilising hydrolases - class B enzymes utilise a catalytic zinc centre instead. The 3 classes of serine beta-lactamase are evolutionarily related and belong to a superfamily that also includes DD-peptidases and other penicillin-binding proteins []. All these proteins contain an S-x-x-K motif, the Ser being the active site residue. Although clearly related, however, the sequences of the 3 classes of serine beta-lactamases vary considerably outside the active site. ; PDB: 1CI8_A 1CI9_B 1PW8_A 1PW1_A 1CEF_A 3PTE_A 1MPL_A 1PWG_A 1CEG_A 1IKG_A .... |
| >KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=316.27 Aligned_cols=344 Identities=22% Similarity=0.304 Sum_probs=283.8
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhh
Q 002092 77 DVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKT 156 (968)
Q Consensus 77 dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~ 156 (968)
.++|+...+.|++.++.+..||..++.+++..++|.+|.+-|++||+.|.+++||||||+|++++|.+||||||+||+.+
T Consensus 8 ~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQYPGva~ 87 (363)
T KOG1234|consen 8 SLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQYPGVAR 87 (363)
T ss_pred CccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecCCCchhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeee
Q 002092 157 IILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 236 (968)
Q Consensus 157 ~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v 236 (968)
.+..|+.++..++.+-..++.++-++.+++..++++..|+||.+||....+|+..+. +.+.++||.|
T Consensus 88 sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs-------------~~p~f~VP~V 154 (363)
T KOG1234|consen 88 SIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLS-------------DDPNFYVPRV 154 (363)
T ss_pred hccCcHHHHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhc-------------CCCCcchhHH
Confidence 999999999988887666556667778888899999999999999999999999775 5678999999
Q ss_pred ee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccc
Q 002092 237 IQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (968)
Q Consensus 237 ~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (968)
+. |+.++|+||++.|.+|.....+. +..+..+...+++.+++.|+...|+..||+-+|++++.. ..+|.|+|||.
T Consensus 155 v~Elct~rvlt~el~~G~pid~~~~~s--Q~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~-tk~i~LlDFGA 231 (363)
T KOG1234|consen 155 VDELCTVRVLTLELGQGLPIDKTAKLS--QETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGR-TKKIELLDFGA 231 (363)
T ss_pred HHhhccchhhhhhhhcCccchhhhccc--HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCC-cceEEEEeccc
Confidence 96 99999999999999998764332 234678999999999999999999999999999999865 47899999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcccCCCcHHHHHH-HHHHHhhccCChhhhHHHHHHHHHHHHhhHH
Q 002092 315 TKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLSEQRAKNLK 393 (968)
Q Consensus 315 ~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 393 (968)
++.+..++...|++++.|+..+|.+.+.+..++||+...........+ +..++. -..|. +.-...++.......
T Consensus 232 sr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~DAHv~sv~i-lgepf----a~~~pydF~~q~~t~ 306 (363)
T KOG1234|consen 232 SREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYESKVMEDAHVESVMI-LGEPF----ASDGPYDFGDQTVTD 306 (363)
T ss_pred cccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccchHHHHHHHhhhHhhh-ccccc----cCCCCcCcCccHHHH
Confidence 999999999999999999999999999999999999643222111111 111111 00010 000112222233445
Q ss_pred HHHHHHHhhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccccccccc
Q 002092 394 VIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIM 446 (968)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~L~p~~~~~~~~ 446 (968)
+++..+..+. +++ +...|.|...+.|.+.+..=+|..|++.|...+..
T Consensus 307 ri~~lipvmL----~hR-L~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~lf 354 (363)
T KOG1234|consen 307 RIQNLIPVML----RHR-LCPPPEETYSLHRKLSGAFLLCAKLGATVPCRDLF 354 (363)
T ss_pred HHHhhhHHHH----hcc-CCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHHH
Confidence 5666555543 223 35678889999999999999999999999876653
|
|
| >COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=343.68 Aligned_cols=235 Identities=28% Similarity=0.406 Sum_probs=172.0
Q ss_pred cceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccC---ccCCC
Q 002092 496 LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEF---KSNGK 572 (968)
Q Consensus 496 ~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~---~~~~~ 572 (968)
+|++++++.+|++++...+|+.+...+.+++++|+|+|+|+||+|||+++++|+++|+|+|||||++|+|+. ....
T Consensus 54 ~g~a~av~~~g~~~~~~~~g~~~~~~~~~~~~~t~f~i~S~TK~~ta~~i~~LveeG~l~lddpV~~ylP~~~~~~~~~- 132 (390)
T COG1680 54 PGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTVFRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGG- 132 (390)
T ss_pred CceEEEEEECCEEEEEeccccccccccCCCCCCceeeehhhhHHHHHHHHHHHHHcCCCCCCchHHHhCCCccCCcCCc-
Confidence 599999999999988899999999999999999999999999999999999999999999999999999962 2223
Q ss_pred CCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccC--CCCCCCCceeeccCcHHHHHHHHHHHHhCCCHHH
Q 002092 573 DLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSA--PETEPGQEQLYHYLSFGWLCGGIIERASGKKFQE 650 (968)
Q Consensus 573 ~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~~~~ 650 (968)
..|||+|||+||||+++..............+.+.+.+.+...+ ...+||+.|.|||.+|. +||.|||+++|++|++
T Consensus 133 ~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~-lLg~ive~v~G~~~~~ 211 (390)
T COG1680 133 APITLRDLLTHTSGLPFPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYG-LLGAILERVTGKPLEE 211 (390)
T ss_pred cceeHHHhhhcccCCCCcccccccccchhhhhHHHHHHHHHhccccccCCCCcceeeecccHH-HHHHHHHHhcCCCHHH
Confidence 47999999999999998322211112222334455556777777 46677999999999999 9999999999999999
Q ss_pred HHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceec
Q 002092 651 ILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHC 730 (968)
Q Consensus 651 ~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~s 730 (968)
+++++||+||||+++...................+.... ....+... .......++||+.+
T Consensus 212 ~~~~~i~~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~---~~~~~~~~~~gl~~ 272 (390)
T COG1680 212 LLRERIFEPLGMTSTGFGPPPAPQARLAAGLAPAVGGGG----------------EVDDPGTF---GLGSALAGAGGLFS 272 (390)
T ss_pred HHHHHhhcccCCCccccccChhhhcccccccccccccCC----------------ccccCccc---cccccCCCCCceec
Confidence 999999999999964322222211111000000000000 00000000 00011346799999
Q ss_pred CHHHHHHHHHHHHcCCCCCCC
Q 002092 731 SARALARYYAALADGGVVPPP 751 (968)
Q Consensus 731 Ta~Dlak~~~~ll~gg~~~~~ 751 (968)
|++||++|+++++++|.+.+.
T Consensus 273 t~~d~~~~~~~~l~~~~~~~~ 293 (390)
T COG1680 273 TARDMARFGQALLNGGVLLGR 293 (390)
T ss_pred ccchHHHHHHHHhcCCCccch
Confidence 999999999999999865554
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=213.43 Aligned_cols=117 Identities=38% Similarity=0.572 Sum_probs=110.2
Q ss_pred hhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCC--CCCcchH
Q 002092 108 REFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ--YDFNPII 185 (968)
Q Consensus 108 ~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~ 185 (968)
++||.+++++|.+||++|||||||||||+|++++|++||||||||++++.+..|+++|+.+++++.+..+. +++..++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999887655 7889999
Q ss_pred HHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee
Q 002092 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (968)
Q Consensus 186 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 237 (968)
+++.+.+.+|+||++|++|+++|+++|.+ .+.++||+||
T Consensus 81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~-------------~~~v~vP~vy 119 (119)
T PF03109_consen 81 DEFRDSLLEELDFRREAANLERFRKNFAD-------------SPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhCC-------------CCCEecCCCC
Confidence 99999999999999999999999999863 4689999986
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=188.05 Aligned_cols=182 Identities=18% Similarity=0.224 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.+||+||+|+||+|++.+|+.||||+.+++.... ..+.+.+.....+.... ...+...+.. ..+..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSRY-SKSNPRKLVF---------AWAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCccccccc-ccCCHHHHHH---------HHHHHHHH
Confidence 5899999999999998899999999999985421 11111110000000000 0000001111 12346888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHH---HHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAYAH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~~~l~ 280 (968)
++.++.+ .++.+|.++.....+|||||++|..+... .+.....+.. .++..++.. +.
T Consensus 72 ~l~~l~~------------------~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~-l~ 131 (190)
T cd05145 72 NLKRLYE------------------AGVPVPEPILLKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQ-MR 131 (190)
T ss_pred HHHHHHh------------------CCCCCceEEEecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHH-HH
Confidence 8888864 24677888776678999999999855332 1233334333 344444444 56
Q ss_pred HHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002092 281 QIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 346 (968)
Q Consensus 281 ~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 346 (968)
++|. .|++||||||+||+++ + ++++|+|||+++.++.. ...++..+|++.+...|.
T Consensus 132 ~lH~~~givHrDlkP~NIll~-~--~~~~liDFG~a~~~~~~-------~~~~~~~~~~~~~~~~~~ 188 (190)
T cd05145 132 RLYQEAGLVHGDLSEYNILYH-D--GKPYIIDVSQAVELDHP-------NALEFLRRDIRNINRFFR 188 (190)
T ss_pred HHHHhCCEecCCCChhhEEEE-C--CCEEEEEcccceecCCC-------CHHHHHHHHHHHHHHHhh
Confidence 7777 9999999999999998 4 78999999999998764 445567888888887765
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-19 Score=183.60 Aligned_cols=182 Identities=16% Similarity=0.176 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
..||+||+|+||+|++++|++||||+.+++.......| ..+....++.. .....+...++.++ ...|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH-GYCKSNPRKMVRTW---------AEKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchhhc-cccCCCHHHHHHHH---------HHHHHH
Confidence 47999999999999988999999999998754322211 11000000000 00011111122211 236888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH--HHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQ 281 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~--~l~~ 281 (968)
++.++.+. .+.+|.++.....+|||||++|..+.... +....++...+...+.++ .+.+
T Consensus 72 ~l~~l~~~------------------~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 72 NLKRLVTA------------------GIPCPEPILLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred HHHHHHHC------------------CCCCCcEEEecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 88888641 34456666666679999999997665432 233456666665555443 3677
Q ss_pred H-HhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 002092 282 I-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345 (968)
Q Consensus 282 i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~ 345 (968)
+ |..|++||||||+|||++ + ++++|||||++....... -..++.+|.+.+.+.|
T Consensus 133 l~H~~giiHrDlkP~NIli~-~--~~v~LiDFG~a~~~~~~~-------~~~~~~~d~~~~~~~f 187 (190)
T cd05147 133 LYQDCRLVHADLSEYNLLYH-D--GKLYIIDVSQSVEHDHPH-------ALEFLRMDCVNVNDFF 187 (190)
T ss_pred HHHhCCcccCCCCHHHEEEE-C--CcEEEEEccccccCCCcC-------HHHHHHHHHHHHHHHh
Confidence 7 689999999999999997 3 689999999998654432 1223455666555555
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=171.40 Aligned_cols=183 Identities=21% Similarity=0.283 Sum_probs=125.0
Q ss_pred ccccccceeEEEEEE--eCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCC--CcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRAT--LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD--FNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~--l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~--~~~~~~e~~~~l~~Eld~~ 199 (968)
++||+|++|+||+|+ .++|++||||+.+++.......+. . .. ..+.+. -.....+ .+..+.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~-----~---~~-~~~~~~~~~~~~~~~------~~~~~~ 98 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR-----Y---VD-GDFRFKYRKINPRKL------VRLWAE 98 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh-----h---cc-cchhhccCCCCHHHH------HHHHHH
Confidence 589999999999998 579999999999876532111000 0 00 000000 0000110 112356
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHH---HHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITR 276 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~ 276 (968)
.|++++.++.+. .+.+|+++..+..+|||||++|.++.... +........ .++..++.
T Consensus 99 ~E~~~L~~L~~~------------------~i~~p~~~~~~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~ 159 (237)
T smart00090 99 KEFRNLQRLYEA------------------GVPVPKPIAWRRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILE 159 (237)
T ss_pred HHHHHHHHHHhc------------------CCCCCeeeEecCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHH
Confidence 788888888641 46678888766789999999998876542 112222222 34444443
Q ss_pred HHHHHHHhcC-ccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 277 AYAHQIYVDG-FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 277 ~~l~~i~~~G-~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
. +.++|..| ++|+|+||+||+++ + ++++|+|||++.......+ .+++.+|.+.+...++++|+.
T Consensus 160 ~-l~~LH~~g~iiH~Dikp~NIli~-~--~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~ 224 (237)
T smart00090 160 E-MRKLYKEGELVHGDLSEYNILVH-D--GKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVD 224 (237)
T ss_pred H-HHHHHhcCCEEeCCCChhhEEEE-C--CCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCC
Confidence 3 77899999 99999999999998 4 7899999999998777553 466899999999999999984
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.7e-16 Score=161.73 Aligned_cols=170 Identities=17% Similarity=0.259 Sum_probs=115.0
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
++|++|++|+||+|..++|+.||||+.+++.... ...+-+.+ . ......... ..+..+..|
T Consensus 21 ~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~------~~~~~~~~E 83 (198)
T cd05144 21 NQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYL-------G----DRKHASWLY------LSRLAAQKE 83 (198)
T ss_pred CccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHH-------h----ccccchhHH------HhHHHHHHH
Confidence 6899999999999998899999999987654211 10000000 0 000000011 112234556
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (968)
...+..+.+ ..+.+|+++.....++||||++|.+|.+.... .....++..++.. +.+
T Consensus 84 ~~~l~~l~~------------------~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~~ 140 (198)
T cd05144 84 FAALKALYE------------------EGFPVPKPIDWNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IVK 140 (198)
T ss_pred HHHHHHHHH------------------cCCCCCceeecCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HHH
Confidence 666666643 12467777776778999999999988765321 2344555555554 467
Q ss_pred HHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHH----HHHHHHHHh
Q 002092 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL----AKMFFAAAE 335 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~----~~l~~a~~~ 335 (968)
+|..|++|+|+||+||+++.+ ++++|+|||++..++.+.+..+ ...++++..
T Consensus 141 lh~~gi~H~Dl~p~Nill~~~--~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (198)
T cd05144 141 AYKHGIIHGDLSEFNILVDDD--EKIYIIDWPQMVSTDHPNAEELLDRDVENILRFFR 196 (198)
T ss_pred HHHCCCCcCCCCcccEEEcCC--CcEEEEECCccccCCCccHHHHHHHHHHHHHHHHh
Confidence 899999999999999999865 8999999999999999888876 555555543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-16 Score=171.77 Aligned_cols=145 Identities=17% Similarity=0.217 Sum_probs=92.6
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+-||+||||.||+|++ ++|.+||||-.... .+..+..+.+..|+
T Consensus 15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei----- 60 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEI----- 60 (429)
T ss_pred hhhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHH-----
Confidence 34599999999999998 47899999954211 01112222233333
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH---H
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR---A 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~---~ 277 (968)
+.++.+++ ..-|.+-+..+ .+.-+||||||+|++|++... ..+.-.+..++...+ .
T Consensus 61 -~iLkel~H-----------------~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~ 120 (429)
T KOG0595|consen 61 -KILKELKH-----------------PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLAS 120 (429)
T ss_pred -HHHHhcCC-----------------cceeeEEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHH
Confidence 33333322 11233333333 455689999999999998754 332222233332222 2
Q ss_pred HHHHHHhcCccccCCCCCceEEecC-CC---CceEEEecccccccCHH
Q 002092 278 YAHQIYVDGFFNGDPHPGNFLVSKD-PP---HRPILLDFGLTKKLSSS 321 (968)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~-~~---g~i~LiDFG~~~~l~~~ 321 (968)
.++.+|..+|+|||+||.|||++.. .. -.++|.|||+++.+.+.
T Consensus 121 alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 121 ALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 2677899999999999999999864 12 34789999999999843
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-15 Score=154.85 Aligned_cols=165 Identities=21% Similarity=0.288 Sum_probs=106.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
++||+|++|+||+|+..+|++||||+.+++.......+..++. ..... ....++..+. +.....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~---------~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTG---DYRFG-RKKSNWRYLS---------RLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHH---HHHhc-cCCcchhhhh---------hHHHHHHHH
Confidence 5799999999999998889999999999875432222211100 00000 0001110000 112234555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCC-----CCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR-----LNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~-----L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
++.++.. ..+.+|+++.+...+|||||++|.. +.+... ......++..++..
T Consensus 70 ~l~~l~~------------------~~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~----~~~~~~~~~~~~~~- 126 (187)
T cd05119 70 NLKRLYE------------------AGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRL----LEDPEELYDQILEL- 126 (187)
T ss_pred HHHHHHH------------------cCCCCCceEecCCCEEEEEEeCCCCccChhhhhhhh----cccHHHHHHHHHHH-
Confidence 6666543 1356888887778899999999943 333211 02234445544444
Q ss_pred HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHH
Q 002092 279 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 327 (968)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 327 (968)
+..+|. .|++|+|+||+||+++ + +.++|+|||++.....+.+..+.
T Consensus 127 l~~lh~~~~ivH~Dl~p~Nili~-~--~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 127 MRKLYREAGLVHGDLSEYNILVD-D--GKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred HHHHhhccCcCcCCCChhhEEEE-C--CcEEEEECcccccccCcchHHHH
Confidence 567787 9999999999999998 4 78999999999988887666654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-15 Score=156.89 Aligned_cols=141 Identities=21% Similarity=0.320 Sum_probs=98.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.++.|.+|.||.+.. +++.+|||+.+|.....- + +...+...=-|.+|++
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~----~------------------------~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTE----R------------------------FLKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCchH----H------------------------HHHhhhhhHHHHHHHH
Confidence 6899999999999766 678999999998754320 0 0000011112567888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
++.++.+. ++..|..+. ++..+|||||++|.+|.++..+ +. .....
T Consensus 88 ~l~rL~~~------------------GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~~-~~~~~ 143 (232)
T PRK10359 88 QTDRVRSE------------------GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----SE-DVKAK 143 (232)
T ss_pred HHHHHHHC------------------CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc-----cH-HHHHH
Confidence 99988652 233333321 4678999999999998776321 22 23333
Q ss_pred HHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+ ...+.++|..|++||||||+||+++++ | ++|||||++.....+
T Consensus 144 i-~~~l~~lH~~gi~H~Dikp~Nili~~~--g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 144 I-KASIESLHQHGMVSGDPHKGNFIVSKN--G-LRIIDLSGKRCTAQR 187 (232)
T ss_pred H-HHHHHHHHHcCCccCCCChHHEEEeCC--C-EEEEECCCcccccch
Confidence 3 335889999999999999999999865 6 999999999877543
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-15 Score=167.49 Aligned_cols=146 Identities=18% Similarity=0.211 Sum_probs=96.8
Q ss_pred ccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 120 DFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 120 ~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+|+ .++||.|+||+||.|+-+ +|+.+|+|+++.. ++ .
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M----------------------------------~ 180 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EM----------------------------------L 180 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HH----------------------------------H
Confidence 455 379999999999999975 7999999987632 11 1
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCC-CHHHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV-NKQKVVE 272 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~-~~~~l~~ 272 (968)
-+.+.+|+..=|+.+.. ...-.|-+.|. ....+|||||++|+.+..++. ..+. .....-.
T Consensus 181 ~~~Qv~hV~aERdiL~~-------------~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arf 245 (550)
T KOG0605|consen 181 KKNQVEHVRAERDILAE-------------VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARF 245 (550)
T ss_pred hhhhHHHHHHHHHHhhh-------------cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHH
Confidence 11222333333333321 01123334443 456689999999988876632 2232 2222222
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (968)
-+.+.+ +..||.+|++||||||.|+||+.. |.|+|.|||++.-+....+
T Consensus 246 YiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~--GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 246 YIAETVLAIESIHQLGYIHRDIKPDNLLIDAK--GHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred HHHHHHHHHHHHHHcCcccccCChhheeecCC--CCEeeccccccchhhhhhh
Confidence 233332 788999999999999999999976 9999999999987766555
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-15 Score=156.66 Aligned_cols=136 Identities=22% Similarity=0.279 Sum_probs=94.7
Q ss_pred cccccceeEEEEEEeC-CCCEEEEEEec-----CChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 125 PLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 125 plgsaSigqV~~A~l~-~G~~VAVKV~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.+|.||+|.|++++.+ +|+-||||.-. |.+++...++++.|+.+.+
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH---------------------------- 60 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH---------------------------- 60 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc----------------------------
Confidence 5899999999999986 79999999754 2233333333333322211
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.|+..+-+.|++ ..+-.||.|||+-.-|.+++. -..|.+.+.+-..+.+++
T Consensus 61 ----~NLVnLiEVFrr------------------------krklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l 111 (396)
T KOG0593|consen 61 ----ENLVNLIEVFRR------------------------KRKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLL 111 (396)
T ss_pred ----chHHHHHHHHHh------------------------cceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHH
Confidence 144444444432 234469999999766655433 335677666655555554
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+...|.++++|||+||+||||+.. |.++|+|||+++.++
T Consensus 112 ~ai~~cHk~n~IHRDIKPENILit~~--gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 112 KAIHFCHKNNCIHRDIKPENILITQN--GVVKLCDFGFARTLS 152 (396)
T ss_pred HHhhhhhhcCeecccCChhheEEecC--CcEEeccchhhHhhc
Confidence 566789999999999999999976 899999999999997
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.1e-15 Score=150.81 Aligned_cols=180 Identities=19% Similarity=0.274 Sum_probs=113.1
Q ss_pred EEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHh
Q 002092 133 QVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANL 212 (968)
Q Consensus 133 qV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~ 212 (968)
-||.|...+|++||||+-+.+... +.. .+ ..... ..++...-.-............+|++++.++..
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~-Fk~----~~---~y~~~---~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~-- 67 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTS-FKR----RK---KYRDY---DYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYE-- 67 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---S-S-H----HH---HHTTT---STTSTTC--G--CHHHHHHHHHHHHHHHHHCCC--
T ss_pred CEEEEECCCCCEEEEEEeccCceE-EEE----ee---eeecc---cchhcccccccCHHHHHHHHHHHHHHHHHHHHH--
Confidence 389999889999999998876422 111 11 11111 111110000000011122345678888887643
Q ss_pred cCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccC--CCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCcccc
Q 002092 213 GCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNG 290 (968)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~--G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~ 290 (968)
.++.||+++..++++|||||++ |.++..+............+...+++.+...+|..|++|+
T Consensus 68 ----------------~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHG 131 (188)
T PF01163_consen 68 ----------------AGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHG 131 (188)
T ss_dssp ----------------TT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEES
T ss_pred ----------------CCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceec
Confidence 3688999999889999999999 9998876543322356778888888888888899999999
Q ss_pred CCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 291 DPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 291 D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
||++.||++++ +++++||||.+....... ...++.+|.+.+.+.|.+.|..
T Consensus 132 DLs~~NIlv~~---~~~~iIDf~qav~~~~p~-------a~~~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 132 DLSEYNILVDD---GKVYIIDFGQAVDSSHPN-------AEELLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp S-STTSEEEET---TCEEE--GTTEEETTSTT-------HHHHHHHHHHHHHHHHHCCC--
T ss_pred CCChhhEEeec---ceEEEEecCcceecCCcc-------HHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999984 489999999988776432 2234567889999999888864
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.9e-15 Score=157.79 Aligned_cols=141 Identities=19% Similarity=0.195 Sum_probs=95.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.-||+|+-|.||+++++ +|+-+|+|+++-+++ .++++++.+|+++.++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~------------------------------~~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNID------------------------------PALQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCC------------------------------HHHHHHHHHHHHHHhhC
Confidence 56999999999999985 899999999864433 22334444454443332
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cC-CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~-~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
. .+. |..-..+. .. .-.|+||||+|++|+++... ...+....++....+++
T Consensus 135 ------~------------------spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~ 189 (364)
T KOG0581|consen 135 ------Q------------------SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR-VGRIPEPVLGKIARAVLR 189 (364)
T ss_pred ------C------------------CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHH
Confidence 0 111 11112222 34 36799999999999987431 12244444444333333
Q ss_pred -HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+.++|+ ++++|||+||.||||... |+|+|+|||.++.+...
T Consensus 190 GL~YLh~~~~IIHRDIKPsNlLvNsk--GeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 190 GLSYLHEERKIIHRDIKPSNLLVNSK--GEVKICDFGVSGILVNS 232 (364)
T ss_pred HHHHHhhccCeeeccCCHHHeeeccC--CCEEeccccccHHhhhh
Confidence 777885 999999999999999965 99999999999888665
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-14 Score=146.83 Aligned_cols=137 Identities=23% Similarity=0.372 Sum_probs=100.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++||+||||.+|.|.. .+|++||||+-+..++. | .+..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------p-------------------qL~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------P-------------------QLLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------c-------------------chhHHH
Confidence 6899999999999985 79999999986644331 1 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.-..++. .+-+|.+.+ ....|||||.+ |.+|.++.......+..+.++-..=+.+
T Consensus 62 kvY~iL~~-------------------g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml 121 (341)
T KOG1163|consen 62 KVYRILQG-------------------GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQML 121 (341)
T ss_pred HHHHHhcc-------------------CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHH
Confidence 55444443 466888765 34579999998 8999998776665665554443333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (968)
++.+|.++|+|||+||.|+|..-. -..++.|||||+++.+-
T Consensus 122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 788999999999999999998632 12579999999998764
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.1e-15 Score=169.56 Aligned_cols=151 Identities=19% Similarity=0.301 Sum_probs=103.6
Q ss_pred ccccccccccccceeEEEEEEe-CCCCEEEEEEecCCh----hhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 118 FMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGI----KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 118 f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i----~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
+...-.+-+|.|++|+||+++. .+|+.||||+-++.. .+....++++|+++.
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 3344457899999999999996 589999999866422 222233333333221
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHH--HhcCCC
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL--EAFGVN 266 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~--~~~~~~ 266 (968)
..|+.++ +.||+.-. +...|||||||.|++|.....- ...|+.
T Consensus 70 ---------h~NIVk~----------------------f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLp 118 (732)
T KOG4250|consen 70 ---------HPNIVKL----------------------FDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLP 118 (732)
T ss_pred ---------chhhhhh----------------------cccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCC
Confidence 1122221 12222211 5667999999999999766331 235777
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCce--EEEecccccccCHHH
Q 002092 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSM 322 (968)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i--~LiDFG~~~~l~~~~ 322 (968)
..++...+.++. ++.++++||+|||||||||++-...+|+. +|+|||+++.+++..
T Consensus 119 E~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 119 ESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 777777666655 88899999999999999999875444664 699999999998765
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-14 Score=156.80 Aligned_cols=147 Identities=23% Similarity=0.290 Sum_probs=100.4
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.+|+|.||.|-.|.. ++|+.|||||.+..--... .+....+.+.++|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~------------------------------s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC------------------------------SRAIAKTRDVQNE 226 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc------------------------------cccccchhhhHHH
Confidence 46899999999999986 6999999999764211000 0011234456778
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCH----HHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEITR 276 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~----~~l~~~l~~ 276 (968)
.+.+.++.| +.-|.+-..+. ....|+||||++|+.|-+... +.+.-+ +.+..+++.
T Consensus 227 ieILkkL~H-----------------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 227 IEILKKLSH-----------------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLT 287 (475)
T ss_pred HHHHHhcCC-----------------CCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHH
Confidence 888877643 12244444454 344599999999999977632 222222 233344443
Q ss_pred HHHHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccC
Q 002092 277 AYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (968)
+ +.++|..||+|||+||+|||+..+ .+-.++|.|||+++...
T Consensus 288 a-vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 288 A-VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred H-HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 3 668899999999999999999854 33568899999998774
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-15 Score=157.58 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=120.8
Q ss_pred HHHHHHHhhhCCCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCC
Q 002092 101 EVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (968)
Q Consensus 101 ~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (968)
+..++=+..|.++++|+|.-.+ .+|.||+|.||+|.++ +|+.||||-.. +..||+
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V~sDLQ---------------- 73 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------VDTDLQ---------------- 73 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------ccchHH----------------
Confidence 4555666788899999987766 5999999999999975 89999999532 223332
Q ss_pred CCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCC
Q 002092 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 255 (968)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~ 255 (968)
+++. |...+.++.. -+|-+.|. .++.++|||||..++++
T Consensus 74 ---EIIK--------------EISIMQQC~S--------------------~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 74 ---EIIK--------------EISIMQQCKS--------------------KYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred ---HHHH--------------HHHHHHHcCC--------------------chhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 2222 2222222211 12223332 67889999999999999
Q ss_pred CHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH
Q 002092 256 DCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (968)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (968)
|+..+++..+..++++..+-..+ ++.+|...-+|||+|.||||+..+ |..+|.|||.++++++..-
T Consensus 117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--GIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc--chhhhhhccccchhhhhHH
Confidence 99988888888888887777766 888888899999999999999866 8999999999999988753
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=141.90 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=100.0
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
++||+|++|.||+|+. +|..|+||+..+.....-..|.. .....+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDER-----------------------------IRRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHH-----------------------------HHHHHHHHHHH
Confidence 4789999999999987 78899999877643221111110 01113456777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (968)
++..+.+ ..+.+|.++. ....+|+|||++|.+|.++... .......++..+.. .+.+
T Consensus 52 ~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~~~~~i~~~i~~-~l~~ 110 (211)
T PRK14879 52 IMSRARK------------------AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGMEELELSREIGR-LVGK 110 (211)
T ss_pred HHHHHHH------------------CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccHHHHHHHHHHHH-HHHH
Confidence 7776653 2466777773 6778999999999999876432 11123344444443 4778
Q ss_pred HHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+|..|++|+|+||+|||++ + +.++|+|||+++...
T Consensus 111 lH~~~i~H~Dl~p~Nil~~-~--~~~~liDf~~a~~~~ 145 (211)
T PRK14879 111 LHSAGIIHGDLTTSNMILS-G--GKIYLIDFGLAEFSK 145 (211)
T ss_pred HHhCCcccCCCCcccEEEE-C--CCEEEEECCcccCCC
Confidence 9999999999999999998 3 789999999988654
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-14 Score=159.00 Aligned_cols=142 Identities=23% Similarity=0.299 Sum_probs=94.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||.||+|+. .+|+.||||-.+.... . | +|+-=.+|.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~--------------s---~-------------------ee~~nLREv 59 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY--------------S---W-------------------EECMNLREV 59 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhc--------------c---H-------------------HHHHHHHHH
Confidence 4689999999999996 5899999993221110 0 0 111122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.. ...-+.+-+|+.. ...++||||++- .|.++.+-+...+....+-..+.+++
T Consensus 60 ksL~kln~----------------hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqG 122 (538)
T KOG0661|consen 60 KSLRKLNP----------------HPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQG 122 (538)
T ss_pred HHHHhcCC----------------CCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHH
Confidence 44333320 1122334444432 245799999973 55565554445566677777777777
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..||++||||||+||+||||... .-|+|.|||+++++..
T Consensus 123 L~hiHk~GfFHRDlKPENiLi~~~--~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 123 LAHIHKHGFFHRDLKPENILISGN--DVIKIADFGLAREVRS 162 (538)
T ss_pred HHHHHhcCcccccCChhheEeccc--ceeEeccccccccccc
Confidence 889999999999999999999842 5799999999998853
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-14 Score=162.08 Aligned_cols=162 Identities=17% Similarity=0.221 Sum_probs=102.5
Q ss_pred CccccccccccccccccceeEEEEEEe-CCCCEEEEEEec-----CChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHH
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (968)
.-.+.|+.++ -||.|.|||||+|+. .+|+.||+|-.+ ++....+.+++.
T Consensus 114 r~~~~feki~--kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~----------------------- 168 (560)
T KOG0600|consen 114 RRADSFEKIE--KIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIK----------------------- 168 (560)
T ss_pred cchHHHHHHH--HhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHH-----------------------
Confidence 3445666666 599999999999996 689999999655 222223333333
Q ss_pred HHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHh-
Q 002092 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA- 262 (968)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~- 262 (968)
.++++.+ ...+..-++.. ++.-|||.||++ .|+..+..
T Consensus 169 -----------------ILr~l~H-----------------pNIikL~eivt~~~~~siYlVFeYMd----hDL~GLl~~ 210 (560)
T KOG0600|consen 169 -----------------ILRRLDH-----------------PNIIKLEEIVTSKLSGSIYLVFEYMD----HDLSGLLSS 210 (560)
T ss_pred -----------------HHHhcCC-----------------CcccceeeEEEecCCceEEEEEeccc----chhhhhhcC
Confidence 3333321 01122222221 456789999998 34433322
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCH
Q 002092 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338 (968)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~ 338 (968)
..+...++--.+-+++ ++++|..||+|||||..||||+.+ |.++|.|||+++.++...+..|..-+.-+..+-.
T Consensus 211 p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~--G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpP 288 (560)
T KOG0600|consen 211 PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN--GVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPP 288 (560)
T ss_pred CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC--CCEEeccccceeeccCCCCcccccceEEeeccCh
Confidence 2334444433333333 777889999999999999999965 9999999999998888776655443333333333
Q ss_pred H
Q 002092 339 V 339 (968)
Q Consensus 339 ~ 339 (968)
+
T Consensus 289 E 289 (560)
T KOG0600|consen 289 E 289 (560)
T ss_pred H
Confidence 3
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=155.76 Aligned_cols=139 Identities=15% Similarity=0.233 Sum_probs=95.9
Q ss_pred cccccccceeEEEEEEeC--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 123 ETPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~--~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
.+.||+|+||+||+|+.+ +|+.||||+..+..... ..+ . ....|.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------~------~~~~~~~ 70 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------L------ARHLAAR 70 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------H------HHHHHHH
Confidence 357999999999999874 68888999765321100 000 0 0112566
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (968)
|++.+.++.+ + -.||.++.....+|||||++|.+|... . ......+...+++ .+.
T Consensus 71 E~~iL~~L~h------------------~-~iv~~l~~~~~~~LVmE~~~G~~L~~~---~--~~~~~~~~~~i~~-aL~ 125 (365)
T PRK09188 71 EIRALKTVRG------------------I-GVVPQLLATGKDGLVRGWTEGVPLHLA---R--PHGDPAWFRSAHR-ALR 125 (365)
T ss_pred HHHHHHhccC------------------C-CCCcEEEEcCCcEEEEEccCCCCHHHh---C--ccchHHHHHHHHH-HHH
Confidence 7777777643 1 125666666778999999999888522 1 1112344444443 377
Q ss_pred HHHhcCccccCC-CCCceEEecCCCCceEEEecccccccCH
Q 002092 281 QIYVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 281 ~i~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++|..|++|||+ ||+|||++.+ ++++|+|||+++.+.+
T Consensus 126 ~lH~~gIiHrDL~KP~NILv~~~--~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 126 DLHRAGITHNDLAKPQNWLMGPD--GEAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHCCCeeCCCCCcceEEEcCC--CCEEEEECccceeccc
Confidence 899999999999 8999999754 7899999999998864
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.5e-13 Score=138.06 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=96.3
Q ss_pred ccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHH
Q 002092 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205 (968)
Q Consensus 126 lgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~ 205 (968)
||+|++|.||+|.. +|++|+||+..+.....-..|.. .+...+.+|.+++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDER-----------------------------IRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHH-----------------------------HHHHHHHHHHHHH
Confidence 78999999999984 78999999865432111000000 0011245677777
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.++++ .++.+|.++. ....+|||||++|.+|.+.... .. ..++..+... +..+|
T Consensus 52 ~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~--~~---~~~~~~i~~~-l~~lH 107 (199)
T TIGR03724 52 SRARK------------------AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE--GN---DELLREIGRL-VGKLH 107 (199)
T ss_pred HHHHH------------------CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh--cH---HHHHHHHHHH-HHHHH
Confidence 77654 2456777775 5566999999999998775321 11 1445544443 66799
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..|++|+|+||+||+++ + ++++++|||+++...+.
T Consensus 108 ~~gi~H~Dl~~~Nil~~-~--~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 108 KAGIVHGDLTTSNIIVR-D--DKLYLIDFGLGKYSDEI 142 (199)
T ss_pred HCCeecCCCCcceEEEE-C--CcEEEEECCCCcCCCcH
Confidence 99999999999999998 4 78999999998876543
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-13 Score=143.24 Aligned_cols=144 Identities=21% Similarity=0.251 Sum_probs=96.2
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+-+|.|.+|.||+|+. ++|+.||||-++.+-.+ +.+.....+|+.+.+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------------dGi~~talREIK~Lqe 57 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------------DGINRTALREIKLLQE 57 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------------cCccHHHHHHHHHHHH
Confidence 35799999999999996 68999999977654211 1111222334444444
Q ss_pred HH--HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHH
Q 002092 202 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 276 (968)
Q Consensus 202 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~ 276 (968)
.+ |+..+.+.|.. .+.-.||.||++ +|++.. +..-+.+..+-..+..
T Consensus 58 l~h~nIi~LiD~F~~------------------------~~~l~lVfEfm~----tdLe~vIkd~~i~l~pa~iK~y~~m 109 (318)
T KOG0659|consen 58 LKHPNIIELIDVFPH------------------------KSNLSLVFEFMP----TDLEVVIKDKNIILSPADIKSYMLM 109 (318)
T ss_pred ccCcchhhhhhhccC------------------------CCceEEEEEecc----ccHHHHhcccccccCHHHHHHHHHH
Confidence 32 33333333321 344569999998 454332 2223445555555555
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA 325 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~ 325 (968)
.+ +..+|.+.++|||+||.|+||+.+ |.++|.|||+++.+....+..
T Consensus 110 ~LkGl~y~H~~~IlHRDlKPnNLLis~~--g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 110 TLKGLAYCHSKWILHRDLKPNNLLISSD--GQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred HHHHHHHHHhhhhhcccCCccceEEcCC--CcEEeecccchhccCCCCccc
Confidence 55 778899999999999999999966 999999999999887555443
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.1e-13 Score=137.05 Aligned_cols=175 Identities=15% Similarity=0.171 Sum_probs=112.7
Q ss_pred ccccccceeEEEEEEeCC-------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCC-------CCcchHHHHH
Q 002092 124 TPLATASIAQVHRATLVD-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY-------DFNPIIDEWC 189 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~-------G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~-------~~~~~~~e~~ 189 (968)
.+|++|--+-||.|...+ +.+|||||-+.+..+- +. ...++.. .+.+ +...++..+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-----k~---~~~y~~~-~~rf~~~~~k~~~~~~~~~w- 72 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-----KN---RDKYIKD-DYRFKDRFSKLNPRKIIRMW- 72 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-----cC---hhhhccC-CcccccCcCCCCHHHHHHHH-
Confidence 378999999999998643 5899999988654321 10 1111110 0111 111122222
Q ss_pred HhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCC---
Q 002092 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN--- 266 (968)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~--- 266 (968)
-.+|++++.++++. ++.||+++...+.+|||||+.|..+... .+.....+
T Consensus 73 --------a~kE~r~L~rl~~~------------------Gv~vP~pi~~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~ 125 (197)
T cd05146 73 --------AEKEMHNLKRMQKA------------------GIPCPEVVVLKKHVLVMSFIGDDQVPAP-KLKDAKLNDEE 125 (197)
T ss_pred --------HHHHHHHHHHHHHc------------------CCCCCeEEEecCCEEEEEEcCCCCccch-hhhccccCHHH
Confidence 24689999998762 6889999998999999999987533211 12211222
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 002092 267 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345 (968)
Q Consensus 267 ~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~ 345 (968)
...+...++..+...+|..|++|+||+|.|||+.+ ++++|||||++...+...-.. ++.+|.+.+.+.|
T Consensus 126 ~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~---~~v~iIDF~qav~~~hp~a~~-------~l~RD~~ni~~fF 194 (197)
T cd05146 126 MKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD---GKVWFIDVSQSVEPTHPHGLE-------FLFRDCRNVIQFF 194 (197)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC---CcEEEEECCCceeCCCCCHHH-------HHHHHHHHHHHHh
Confidence 23445566666566668999999999999999973 689999999998887543322 2345555555544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.4e-13 Score=154.59 Aligned_cols=185 Identities=16% Similarity=0.170 Sum_probs=110.9
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||.|+||||-||.. ++++.|||||++-.-.- .++ -..|
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f----------------------------~~Q----------~~~E 232 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF----------------------------LRQ----------AQIE 232 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHH----------------------------HHH----------HHHH
Confidence 36899999999999996 68999999998643210 000 0124
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHH---HHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKV---VEE 273 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l---~~~ 273 (968)
.+.++.+.+. . ......+-+.+. .+..+||.|.+ +..|.++.+... .|+....+ +..
T Consensus 233 i~iL~~ln~~-d-------------~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Q 297 (586)
T KOG0667|consen 233 IRILELLNKH-D-------------PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQ 297 (586)
T ss_pred HHHHHHHhcc-C-------------CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 4445555421 0 011233333332 57779999999 567777654332 24444333 333
Q ss_pred HHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcccC
Q 002092 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 353 (968)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~ 353 (968)
++.. +..|++.|||||||||+|||+-+-...+|++||||.+...++..- .| + ...+-+.-+++..+.+...
T Consensus 298 il~~-L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-tY---i----QSRfYRAPEVILGlpY~~~ 368 (586)
T KOG0667|consen 298 ILTA-LLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-TY---I----QSRFYRAPEVILGLPYDTA 368 (586)
T ss_pred HHHH-HHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-ee---e----eccccccchhhccCCCCCc
Confidence 3332 567789999999999999999754446899999999988765432 11 1 2222234445544444334
Q ss_pred CCcHHHHHHHHHHHhh
Q 002092 354 LDVPEQAMEVSTLFFR 369 (968)
Q Consensus 354 ~~~~~~~~~~~~~~~~ 369 (968)
.|+=-+-.-+++++..
T Consensus 369 IDmWSLGCIlAEL~tG 384 (586)
T KOG0667|consen 369 IDMWSLGCILAELFTG 384 (586)
T ss_pred cceeehhhhHHhHhcC
Confidence 4444444446666544
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.6e-13 Score=151.22 Aligned_cols=141 Identities=18% Similarity=0.127 Sum_probs=104.3
Q ss_pred cccccceeEEEEEEeCCCCE-EEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l~~G~~-VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
-+|+|++|+||+|..+ |+. ||||+..+.-...-. +-+|++|+.
T Consensus 48 ~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~-----------------------------------~~~f~~E~~ 91 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDES-----------------------------------RKAFRREAS 91 (362)
T ss_pred hcccCCceeEEEEEeC-CceeEEEEEecchhcChHH-----------------------------------HHHHHHHHH
Confidence 3999999999999985 566 999987654221100 224777888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecC--CCeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS--ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~--~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.++++ ...|.+.-+.... ...|||||++|++|.++... ....++....+..+.++.
T Consensus 92 il~~l~H-----------------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArG 154 (362)
T KOG0192|consen 92 LLSRLRH-----------------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARG 154 (362)
T ss_pred HHHhCCC-----------------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHH
Confidence 8877654 1223444333323 35799999999999998654 245677777777777765
Q ss_pred HHHHHhcC-ccccCCCCCceEEecCCCC-ceEEEecccccccCH
Q 002092 279 AHQIYVDG-FFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G-~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~ 320 (968)
++.+|..+ +||||+||.||||+.+ + .++|.|||+++....
T Consensus 155 m~YLH~~~~iIHrDLK~~NiLv~~~--~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 155 MEYLHSEGPIIHRDLKSDNILVDLK--GKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHhcCCCeeecccChhhEEEcCC--CCEEEECCCccceeecc
Confidence 78899999 9999999999999965 6 899999999987654
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-13 Score=152.00 Aligned_cols=159 Identities=18% Similarity=0.288 Sum_probs=107.0
Q ss_pred CccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
++..+|.-|..+-+|||-||.||-|+. ++|+.|||||+..- +| .
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl--------------------------rF---------p 603 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL--------------------------RF---------P 603 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc--------------------------cC---------C
Confidence 466788888889999999999999997 69999999986420 00 1
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceE-eeeeeecCCC-eEEecccCCCCCCCHHHHHhcCCCHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVIQSSET-VLILEFMDGIRLNDCESLEAFGVNKQK 269 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~-vP~v~~~~~~-vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (968)
..+|-.+|+|.+.++.+.+ +++. .--.+.+.++ +.|||-+.|.-|.-+...+...+ .++
T Consensus 604 ~kqesqlR~EVaILq~l~H------------------PGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL-~er 664 (888)
T KOG4236|consen 604 TKQESQLRNEVAILQNLHH------------------PGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRL-PER 664 (888)
T ss_pred CchHHHHHHHHHHHHhcCC------------------CCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccc-hHH
Confidence 1234456777777666532 3333 3233344444 57999999966655443332222 222
Q ss_pred HHHH-HHH--HHHHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCHH-HHHH
Q 002092 270 VVEE-ITR--AYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSS-MKQA 325 (968)
Q Consensus 270 l~~~-l~~--~~l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~-~r~~ 325 (968)
+-+- +.+ ..++.+|..||+|||+||+|||+... +--+++|+|||.++.+.++ +|+.
T Consensus 665 ~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs 725 (888)
T KOG4236|consen 665 ITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS 725 (888)
T ss_pred HHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence 2221 222 23788899999999999999999753 2247999999999999765 4443
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.2e-13 Score=144.44 Aligned_cols=147 Identities=21% Similarity=0.239 Sum_probs=90.2
Q ss_pred cccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 117 MFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 117 ~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
.|+.++ .+|.|++|.||+|+. .+|+.||+|.++-.-++.- .|
T Consensus 12 ~~~~~e--klGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------------~P------------------ 54 (323)
T KOG0594|consen 12 DYEKVE--KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------------VP------------------ 54 (323)
T ss_pred HHHHHH--HhCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------------CC------------------
Confidence 344444 499999999999997 5899999998774322100 00
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cC------CCeEEecccCCCCCCCHHHHHh---cCC
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEA---FGV 265 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLVmE~i~G~~L~~~~~~~~---~~~ 265 (968)
..-.+|..-++++++. ++ -+.+-.+.. .+ .-+||+||++- +|.+...... .+.
T Consensus 55 ~taiREisllk~L~~~---------------~~-iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~ 117 (323)
T KOG0594|consen 55 STAIREISLLKRLSHA---------------NH-IVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGL 117 (323)
T ss_pred chhhHHHHHHHHhCCC---------------cc-eEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCC
Confidence 0112344444444331 11 233333333 22 45699999972 3333322111 245
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+...+-..+.+++ +..+|.+||+|||+||.||+|+++ |.++|+|||+++.+.
T Consensus 118 ~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~--G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 118 PPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS--GVLKLADFGLARAFS 171 (323)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC--CcEeeeccchHHHhc
Confidence 5433332233332 667899999999999999999965 999999999998665
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-13 Score=157.63 Aligned_cols=138 Identities=17% Similarity=0.188 Sum_probs=96.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecC------ChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQ------GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p------~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
+-||.|+||+||+++. .+|+.||+||... +.++.+..+++
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIe--------------------------------- 70 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIE--------------------------------- 70 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHH---------------------------------
Confidence 6799999999999997 7899999998642 22222222222
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
....+.+ ...|.+-..+. +..-|||.|+|+-.+|..+.+ ++..+...++...+.
T Consensus 71 -------IHr~L~H-----------------pnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~ 125 (592)
T KOG0575|consen 71 -------IHRSLKH-----------------PNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLR 125 (592)
T ss_pred -------HHHhcCC-----------------CcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHH
Confidence 2111111 11122222233 455579999999999888765 444555555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+++ +..+|.+||+|||+|-|||+++++ .+++|.|||++..+..+
T Consensus 126 QIv~GlkYLH~~~IiHRDLKLGNlfL~~~--~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 126 QIVEGLKYLHSLGIIHRDLKLGNLFLNEN--MNVKIGDFGLATQLEYD 171 (592)
T ss_pred HHHHHHHHHHhcCceecccchhheeecCc--CcEEecccceeeeecCc
Confidence 554 778899999999999999999965 89999999999999743
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.6e-13 Score=149.13 Aligned_cols=142 Identities=27% Similarity=0.357 Sum_probs=95.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc-HHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF-NSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~-~~E 201 (968)
+-||.|||++|++|+. ++++++||||..... + ++| +-++| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-------------I----------------ike------~KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY-------------I----------------IKE------KKVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH-------------H----------------Hhh------cccchhhHH
Confidence 5799999999999996 589999999853210 0 000 11111 223
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHH----HHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK----VVEE 273 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~----l~~~ 273 (968)
-..+.++.+ +++ |-++|. ....|.|+||++++.|-++ +...|.-... .+..
T Consensus 124 k~~l~~L~~-----------------hPg--ivkLy~TFQD~~sLYFvLe~A~nGdll~~--i~K~Gsfde~caR~YAAe 182 (604)
T KOG0592|consen 124 KEALTQLSG-----------------HPG--IVKLYFTFQDEESLYFVLEYAPNGDLLDL--IKKYGSFDETCARFYAAE 182 (604)
T ss_pred HHHHHHhhC-----------------CCC--eEEEEEEeecccceEEEEEecCCCcHHHH--HHHhCcchHHHHHHHHHH
Confidence 334444431 222 334443 5677999999999888765 3343321111 2222
Q ss_pred HHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHH
Q 002092 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (968)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (968)
++.+ ++.||.+||||||+||+|||++.| |+|.|.|||.++.+++....
T Consensus 183 IldA-leylH~~GIIHRDlKPENILLd~d--mhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 183 ILDA-LEYLHSNGIIHRDLKPENILLDKD--GHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred HHHH-HHHHHhcCceeccCChhheeEcCC--CcEEEeeccccccCChhhcc
Confidence 2222 788999999999999999999976 99999999999999987654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.8e-12 Score=133.81 Aligned_cols=158 Identities=16% Similarity=0.125 Sum_probs=106.1
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.+++++||+||.+.. ++++|+.+-..- +-..+ +..... -+++|++
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~--------~~~~~--------------------~~~~~~-----l~~rE~~ 53 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSA--------APWWL--------------------RGVAWW-----LARREAL 53 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeeccccc--------chhhh--------------------hhHHHH-----HHHHHHH
Confidence 5789999999998775 777887663211 00000 100000 1456787
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.+.++.+ ...+|+++.....+++|||++|.+|.+... . ....+...+.+ .+.++|
T Consensus 54 iL~~L~~-------------------~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~lH 108 (218)
T PRK12274 54 ALRQLDG-------------------LPRTPRLLHWDGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQLH 108 (218)
T ss_pred HHHhcCC-------------------CCCCCEEEEEcCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHHH
Confidence 8777643 245788876566899999999998864321 1 11233334443 477899
Q ss_pred hcCccccCC-CCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002092 284 VDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (968)
Q Consensus 284 ~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 347 (968)
..|++|+|+ ||+|||++.+ |+++|||||++....+.-+ ...-+..+|...+.+.++.
T Consensus 109 ~~GIvHrDL~kp~NILv~~~--g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 109 RCGVAHNDLAKEANWLVQED--GSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred HCcCccCCCCCcceEEEcCC--CCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 999999999 7999999865 8899999999987665333 2222345888888888866
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.4e-13 Score=143.88 Aligned_cols=143 Identities=20% Similarity=0.271 Sum_probs=93.8
Q ss_pred ccccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 118 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 118 f~~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
.++|+ .+-||.||||+|+.++.+ +|+-.|+||.+... + ++. .|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~-------------i----------------v~~------~e 68 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK-------------I----------------VEK------KE 68 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH-------------h----------------hhh------hh
Confidence 34555 378999999999999974 68999999875310 0 000 00
Q ss_pred c-CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcC-CCHHHH
Q 002092 196 L-DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFG-VNKQKV 270 (968)
Q Consensus 196 l-d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l 270 (968)
+ ....|...+.++. -++.|.-.|. ..+-+||+||+.|+.|.-. +.+.+ +....+
T Consensus 69 ~~~~~~Er~IL~~v~-------------------hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h--L~~eg~F~E~~a 127 (357)
T KOG0598|consen 69 VRHTKAERNILSKIK-------------------HPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH--LQREGRFSEDRA 127 (357)
T ss_pred HHHHHHHHHHHHhCC-------------------CCcEeeeEEecccCCeEEEEEeccCCccHHHH--HHhcCCcchhHH
Confidence 0 0122333333322 2455665564 5677999999999888643 33322 222222
Q ss_pred HHHHHH--HHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 271 VEEITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 271 ~~~l~~--~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
---+++ ..+..+|+.||+|||+||+|||++.+ |.|+|.|||+++..
T Consensus 128 rfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~--GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 128 RFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ--GHIKLTDFGLCKED 175 (357)
T ss_pred HHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC--CcEEEeccccchhc
Confidence 222233 33788999999999999999999976 99999999999843
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.5e-13 Score=141.65 Aligned_cols=140 Identities=18% Similarity=0.197 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.-|++|+||.||||+. ++++.||+|-.+++-++. ++. +-..+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFP---------------ItsLREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFP---------------ITSLREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCc---------------chhHHHH
Confidence 4699999999999997 589999999776654321 111 1123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHH-Hhc--CCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESL-EAF--GVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~-~~~--~~~~~~l~~~l~~ 276 (968)
..+.++++ ..-|.|-+|.- + .+-+||||||+ .|+..+ ... .+...++--...+
T Consensus 127 niLl~~~H-----------------~NIV~vkEVVvG~~~d~iy~VMe~~E----hDLksl~d~m~q~F~~~evK~L~~Q 185 (419)
T KOG0663|consen 127 NILLKARH-----------------PNIVEVKEVVVGSNMDKIYIVMEYVE----HDLKSLMETMKQPFLPGEVKTLMLQ 185 (419)
T ss_pred HHHHhcCC-----------------CCeeeeEEEEeccccceeeeeHHHHH----hhHHHHHHhccCCCchHHHHHHHHH
Confidence 44444432 22466667664 2 45689999998 344332 222 2333333333344
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
++ ++.+|...++|||+||.|+|+.+. |.+++.|||+++.+...
T Consensus 186 lL~glk~lH~~wilHRDLK~SNLLm~~~--G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 186 LLRGLKHLHDNWILHRDLKTSNLLLSHK--GILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHHHHhhceeEecccchhheeeccC--CcEEecccchhhhhcCC
Confidence 33 788899999999999999999976 99999999999998765
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-12 Score=148.15 Aligned_cols=145 Identities=18% Similarity=0.207 Sum_probs=96.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.|+.|+. .+|+.|||||........ + . ......+ .+|.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~---~-----------------~------~~~~~~i------~rEi 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS---K-----------------S------QKLDELI------KREI 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccc---c-----------------c------cccchhh------HHHH
Confidence 6899999999999986 589999999865430000 0 0 0000111 1455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH-HH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-AY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~-~~-- 278 (968)
.++++++.. ...+.+-+++. .++.++||||+.|+.|.+.... ...+.. ..++.+++ ++
T Consensus 71 ~~~~~~~~H----------------pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E-~~ar~~F~Qlisa 132 (370)
T KOG0583|consen 71 SILRRLRSH----------------PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKE-DEARKYFRQLISA 132 (370)
T ss_pred HHHHHhccC----------------CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCCh-HHHHHHHHHHHHH
Confidence 666666521 12345556665 5668999999999888776432 223333 22332222 22
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+.++|.+|++|||+||+||+++.++ +.++|+|||++....
T Consensus 133 v~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 133 VAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence 7788999999999999999999643 899999999998773
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-12 Score=147.22 Aligned_cols=143 Identities=19% Similarity=0.204 Sum_probs=92.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+...... .. ..-.+..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LN------------------------------EVRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hh------------------------------HHHHHHHHH
Confidence 57999999999999985 68999999876432110 00 000123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++ +
T Consensus 53 ~~l~~~~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l 114 (333)
T cd05600 53 DILTTTKS-----------------EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAV 114 (333)
T ss_pred HHHHhCCC-----------------CCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 43333321 00112222222 4556899999999999876431 22344444443333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 115 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 115 DALHELGYIHRDLKPENFLIDAS--GHIKLTDFGLSKGIVT 153 (333)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEEEeCcCCccccc
Confidence 78999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.8e-13 Score=151.04 Aligned_cols=182 Identities=16% Similarity=0.204 Sum_probs=120.0
Q ss_pred CCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEe-cCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHH
Q 002092 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQ-HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (968)
Q Consensus 111 g~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~-~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (968)
..+++.+|.++- -||-||||-||.|+. ++.+.||||-. +.|-. -.+.|
T Consensus 21 k~DPEklf~dLr--EIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ----------------------------s~EKW 70 (948)
T KOG0577|consen 21 KDDPEKLFSDLR--EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ----------------------------SNEKW 70 (948)
T ss_pred cCCHHHHHHHHH--HhcCCccceeEEeeccCccceeeeeeccccccc----------------------------cHHHH
Confidence 456777876554 599999999999997 68889999843 22211 11122
Q ss_pred HHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCH
Q 002092 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (968)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (968)
. |...|.+.+.++++- ..+..-..|. ...-+||||||-| +-+|+......++..
T Consensus 71 q-------DIlKEVrFL~~l~HP-----------------ntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqE 125 (948)
T KOG0577|consen 71 Q-------DILKEVRFLRQLRHP-----------------NTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQE 125 (948)
T ss_pred H-------HHHHHHHHHHhccCC-----------------CcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchH
Confidence 2 223344444444320 1111112222 4556899999987 556776666666766
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH------HHHHHHHHHHHhCCHH
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK------QALAKMFFAAAEGDHV 339 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r------~~~~~l~~a~~~~d~~ 339 (968)
..++.....++ +.++|.++.||||+|.||||+++. |.++|.|||.+....+... +.--.+++|+-+|.|+
T Consensus 126 vEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~--g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYd 203 (948)
T KOG0577|consen 126 VEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP--GLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYD 203 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC--CeeeeccccchhhcCchhcccCCccccchhHheeccccccC
Confidence 77777666666 889999999999999999999965 8999999999887765421 1122456667777777
Q ss_pred HHHHHHHHcCc
Q 002092 340 ALLSAFAEMGL 350 (968)
Q Consensus 340 ~~~~~~~~~g~ 350 (968)
+=+++. .+|+
T Consensus 204 gkvDvW-SLGI 213 (948)
T KOG0577|consen 204 GKVDVW-SLGI 213 (948)
T ss_pred Ccccee-eccc
Confidence 655553 3454
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.3e-12 Score=134.04 Aligned_cols=146 Identities=18% Similarity=0.226 Sum_probs=94.6
Q ss_pred cccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 119 ~~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
.+|+ ..-+|.||||.||.++.+ +|.-.|+||+.... +--|+.+-
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------vVklKQve--------------------------- 89 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------VVKLKQVE--------------------------- 89 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-------HHHHHHHH---------------------------
Confidence 3455 367999999999999985 78999999875211 00011110
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCH--HHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNK--QKV 270 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~--~~l 270 (968)
...+|-+.+.++.+ ..+-+.+. .+.-+|||||++|+.|..+.+-. ..++. .++
T Consensus 90 H~~nEk~vL~~v~~--------------------PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arF 148 (355)
T KOG0616|consen 90 HTHNEKRVLKAVSH--------------------PFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARF 148 (355)
T ss_pred HHhhHHHHHhhccC--------------------ceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhc-CCCCchhHHH
Confidence 01123223222211 11122232 46678999999999998764321 12222 222
Q ss_pred HHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 271 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 271 ~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
...-+-+.++.||..++++||+||+|||++.+ |.|++.|||.++.++..
T Consensus 149 YAAeivlAleylH~~~iiYRDLKPENiLlD~~--G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 149 YAAEIVLALEYLHSLDIIYRDLKPENLLLDQN--GHIKITDFGFAKRVSGR 197 (355)
T ss_pred HHHHHHHHHHHHHhcCeeeccCChHHeeeccC--CcEEEEeccceEEecCc
Confidence 22233344889999999999999999999976 99999999999999865
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-12 Score=148.50 Aligned_cols=141 Identities=18% Similarity=0.217 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+..... . .+... .++.|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~--------------------------~~~~~------~~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--E--------------------------KEQVG------HIRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--H--------------------------hhHHH------HHHHHH
Confidence 57999999999999874 7999999987632100 0 00000 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+.++.+ ..|++.+ . ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 53 ~il~~~~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (363)
T cd05628 53 DILVEADS--------------------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQFYIAETV 111 (363)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33333211 1233333 2 445689999999998877643 223445555444444443
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~~~--~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLDSK--GHVKLSDFGLCTGLKKA 154 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEECCC--CCEEEeeccCccccccc
Confidence 788999999999999999999865 89999999999877543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-12 Score=138.40 Aligned_cols=140 Identities=18% Similarity=0.212 Sum_probs=96.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|...+++.||+|+.+........ .++.+|++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~------------------------------------~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK------------------------------------IKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHH------------------------------------HHHHHHHH
Confidence 368999999999999888999999987654432111 12344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
.+.++.+ +. +.+...+. ....++||||++|.+|.+.........+...+...+.++. +
T Consensus 45 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 106 (250)
T cd05085 45 ILKQYDH------------------PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGM 106 (250)
T ss_pred HHHhCCC------------------CCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 5544421 11 12222222 4567899999999998776432223345555555555443 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 107 ~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~ 144 (250)
T cd05085 107 AYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSRQED 144 (250)
T ss_pred HHHHhCCeeecccChheEEEcCC--CeEEECCCccceecc
Confidence 77899999999999999999865 889999999886543
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-12 Score=145.66 Aligned_cols=139 Identities=15% Similarity=0.106 Sum_probs=89.7
Q ss_pred cccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.||+|++|.||+|+. .+|+.||||+.+...... - .+. ..+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~-----------------------~~~-------~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----K-----------------------DEV-------AHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----h-----------------------HHH-------HHHHHHHH
Confidence 589999999999997 489999999976421100 0 000 01223444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+. .-+.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +.
T Consensus 48 ~l~~l~hp-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~ 109 (323)
T cd05571 48 VLQNTRHP-----------------FLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALG 109 (323)
T ss_pred HHHhCCCC-----------------CCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 44433220 0111222222 455689999999998866532 222344444444333433 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 110 ~lH~~~ivHrDlkp~NIll~~~--~~~kl~DfG~a~~ 144 (323)
T cd05571 110 YLHSCDVVYRDLKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHhCCeEeCCCCHHHEEECCC--CCEEEeeCCCCcc
Confidence 8999999999999999999865 8999999999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-12 Score=148.84 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=90.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+|+.||||+.+.... .. .+.. -.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~~------~~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LN--------------------------RNQV------AHVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hHHH------HHHHHHH
Confidence 4699999999999987 5789999998753110 00 0000 0133344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA- 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~- 277 (968)
..+.++.+ + .|++++. ....+|||||++|++|.++.. ....+....+...+.++
T Consensus 53 ~il~~l~h------------------~--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (381)
T cd05626 53 DILAEADN------------------E--WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELT 111 (381)
T ss_pred HHHHhcCC------------------C--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44433321 1 2333332 455789999999998877642 11223333333333332
Q ss_pred -HHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 278 -YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 -~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+..+|..|++|||+||.|||++.+ ++++|+|||++..+.
T Consensus 112 ~aL~~LH~~givHrDlKp~Nili~~~--~~~kL~DFGl~~~~~ 152 (381)
T cd05626 112 LAIESVHKMGFIHRDIKPDNILIDLD--GHIKLTDFGLCTGFR 152 (381)
T ss_pred HHHHHHHhCCeeecCCcHHHEEECCC--CCEEEeeCcCCcccc
Confidence 2788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-12 Score=147.32 Aligned_cols=140 Identities=18% Similarity=0.221 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+.... .. .+... .++.|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~--------------------------~~~~~------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LE--------------------------KEQVA------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hh--------------------------hhhHH------HHHHHH
Confidence 57999999999999974 799999998763210 00 00000 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+.++.+ -.+++++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 53 ~~l~~l~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (360)
T cd05627 53 DILVEADG--------------------AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQFYIAETV 111 (360)
T ss_pred HHHHhCCC--------------------CCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33333211 1233333 2 455689999999999877643 223344444444333433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 112 ~~L~~lH~~givHrDLkp~NIli~~~--~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 112 LAIDAIHQLGFIHRDIKPDNLLLDAK--GHVKLSDFGLCTGLKK 153 (360)
T ss_pred HHHHHHHHCCeEccCCCHHHEEECCC--CCEEEeeccCCccccc
Confidence 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.9e-13 Score=149.97 Aligned_cols=142 Identities=18% Similarity=0.335 Sum_probs=94.9
Q ss_pred cccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 117 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 117 ~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
.|..+ ++||-|.||.|..++-- +...+|+|.+|. .|. +.+.-...+..|
T Consensus 630 mFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV---------------------l~rnQvaHVKAE 679 (1034)
T KOG0608|consen 630 MFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV---------------------LMRNQVAHVKAE 679 (1034)
T ss_pred ceEEE--eeecccccceeEEEeecchhhHHHHhhhHH-------HHH---------------------Hhhhhhhhhhhh
Confidence 45444 57999999999999853 344567775432 111 011111223345
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
-|...||.| .+.| ++|. ....|+|||||+|+.+-.+ +-+.|+-.+.++
T Consensus 680 RDILAEADn-------------------------~WVV-rLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LA 731 (1034)
T KOG0608|consen 680 RDILAEADN-------------------------EWVV-RLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLA 731 (1034)
T ss_pred hhhHhhcCC-------------------------cceE-EEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHH
Confidence 555555432 2323 3443 4567899999999888665 445666666666
Q ss_pred HHHHH---HHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 272 EEITR---AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 272 ~~l~~---~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+-.+. +.++.+|.-|||||||||.|||||.| |.|+|.|||+|.-+
T Consensus 732 RFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd--GHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 732 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 779 (1034)
T ss_pred HHHHHHHHHHHHHHHhccceecccCccceEEccC--Cceeeeeccccccc
Confidence 54443 33788999999999999999999987 99999999999755
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.7e-12 Score=144.90 Aligned_cols=139 Identities=15% Similarity=0.120 Sum_probs=90.3
Q ss_pred cccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.||+|++|+||+|+. .+|+.||||+.++..... . ++ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~-------------------------~~-------~~~~~~E~~ 47 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA--K-------------------------DE-------VAHTLTESR 47 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h-------------------------hH-------HHHHHHHHH
Confidence 589999999999997 479999999986432100 0 00 001233444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
.+..+.+ +. +.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 ~l~~l~h------------------p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL 108 (328)
T cd05593 48 VLKNTRH------------------PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLS-RERVFSEDRTRFYGAEIVSAL 108 (328)
T ss_pred HHHhCCC------------------CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 4443321 11 11112222 455689999999998865532 122344444444444433 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||.|||++.+ +.++|+|||+++..
T Consensus 109 ~~LH~~~ivHrDikp~NIll~~~--~~~kL~DfG~~~~~ 145 (328)
T cd05593 109 DYLHSGKIVYRDLKLENLMLDKD--GHIKITDFGLCKEG 145 (328)
T ss_pred HHHHhCCeEecccCHHHeEECCC--CcEEEecCcCCccC
Confidence 78999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.6e-12 Score=143.66 Aligned_cols=176 Identities=18% Similarity=0.220 Sum_probs=116.7
Q ss_pred HHHHHhhcCC--CCCHHHHHHHHHhhh-CCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhh
Q 002092 86 LLKQLQDSLP--PRPVQEVSQTIEREF-GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILED 161 (968)
Q Consensus 86 ~L~~Lqd~~p--~~~~~~v~~~l~~el-g~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~D 161 (968)
.+.++.|+-. +++-+++...+..-. ..++...|..|. .||.|+-|-||.|+- .+++.||||... +..+-..+
T Consensus 240 ~~~~~~d~~~~~~~~~~~~~~~l~~v~~~~dP~~~y~~~~--kigqgaSG~vy~A~~~~~~~~VaiK~m~--l~~Q~~ke 315 (550)
T KOG0578|consen 240 HKQQLSDSSAQSIVSKEEILAKLKRVVSQGDPRSKYTDFK--KIGQGATGGVYVARKISTKQEVAIKRMD--LRKQPKKE 315 (550)
T ss_pred cccccCchhccccchHHHHHHHhheeccCCChhhhhcchh--hhccccccceeeeeeccCCceEEEEEEE--eccCCchh
Confidence 3444444422 244445555554432 234555666665 599999999999985 689999999643 11111111
Q ss_pred HHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH--HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec
Q 002092 162 LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE--AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS 239 (968)
Q Consensus 162 l~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E--a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~ 239 (968)
+ +..|+...++ -.|+.+|-+.|-. .
T Consensus 316 L-----------------------------ilnEi~Vm~~~~H~NiVnfl~Sylv------------------------~ 342 (550)
T KOG0578|consen 316 L-----------------------------LLNEILVMRDLHHPNIVNFLDSYLV------------------------G 342 (550)
T ss_pred h-----------------------------hHHHHHHHHhccchHHHHHHHHhcc------------------------c
Confidence 1 1112222222 1355555443310 3
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.+.+.||||++|++|.|+.. ...++..+++..+-+.+ ++.+|..|++|||+|-.|||++.+ |.++|.|||+|.+
T Consensus 343 deLWVVMEym~ggsLTDvVt--~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~--g~vKltDFGFcaq 418 (550)
T KOG0578|consen 343 DELWVVMEYMEGGSLTDVVT--KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD--GSVKLTDFGFCAQ 418 (550)
T ss_pred ceeEEEEeecCCCchhhhhh--cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC--CcEEEeeeeeeec
Confidence 55678999999999999854 34466677777666655 888999999999999999999976 8999999999999
Q ss_pred cCHHH
Q 002092 318 LSSSM 322 (968)
Q Consensus 318 l~~~~ 322 (968)
++++.
T Consensus 419 i~~~~ 423 (550)
T KOG0578|consen 419 ISEEQ 423 (550)
T ss_pred ccccc
Confidence 98876
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-12 Score=140.80 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|.. .+|+.||||+.+....... ..+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhh----------------------------------hhHHHHHHHH
Confidence 5699999999999997 5899999998654321100 0111233455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+ ...+.+...+. ....++||||++|.+|.+..... ....+...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 52 RILEKVNS-----------------RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred HHHHhcCC-----------------CcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 55554432 11123333333 45568999999999987553221 12345555544444443
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nill~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLDDR--GHIRISDLGLAVQIP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeCCCcEEcC
Confidence 778899999999999999999865 889999999988764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.2e-12 Score=147.00 Aligned_cols=141 Identities=14% Similarity=0.118 Sum_probs=89.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||||+.+..-. . . .+. ...+.+|.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-------~--~-------------------~~~------~~~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-------L--M-------------------RNQ------AAHVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-------H--h-------------------hhh------HHHHHHHH
Confidence 5799999999999997 4799999998753110 0 0 000 00123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ...+.+-..+. ....+|||||++|++|.++..- ...+....+...+.+++ +
T Consensus 53 ~il~~l~h-----------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al 114 (376)
T cd05598 53 DILAEADN-----------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAI 114 (376)
T ss_pred HHHHhCCC-----------------CCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 44433321 01122222222 4567899999999999876431 12233333333233332 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||+|||++.+ +.++|+|||++..+
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~--~~ikL~DFG~a~~~ 151 (376)
T cd05598 115 ESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (376)
T ss_pred HHHHHCCeEeCCCCHHHEEECCC--CCEEEEeCCCCccc
Confidence 78999999999999999999865 89999999998655
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.6e-12 Score=136.68 Aligned_cols=141 Identities=16% Similarity=0.189 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+........ -.+.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK------------------------------------AKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH------------------------------------HHHHHHH
Confidence 36899999999999974 8999999986543221110 0133344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++........+...+...+.+++ +
T Consensus 45 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L 107 (252)
T cd05084 45 RILKQYSH-----------------PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGM 107 (252)
T ss_pred HHHHhCCC-----------------CCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 00111222222 4567899999999998876432222345555444444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 108 ~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~ 145 (252)
T cd05084 108 EYLESKHCIHRDLAARNCLVTEK--NVLKISDFGMSREEE 145 (252)
T ss_pred HHHHhCCccccccchheEEEcCC--CcEEECccccCcccc
Confidence 78899999999999999999865 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.1e-12 Score=144.39 Aligned_cols=144 Identities=19% Similarity=0.158 Sum_probs=93.4
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.+ +|+.||||+.+..... +... . -.+.+|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~--------------------~----------~~~~~E 68 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMKQ--------------------V----------QHVAQE 68 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhh--------------------H----------HHHHHH
Confidence 368999999999999975 7899999987632100 0000 0 013345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
...+.++.+ ..-+.+-..+. ....++||||++|.+|.+... .........+...+.+++
T Consensus 69 ~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~a 130 (329)
T PTZ00263 69 KSILMELSH-----------------PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLR-KAGRFPNDVAKFYHAELVLA 130 (329)
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 555444422 01122222222 456789999999998876543 122233333333333332
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 131 L~~LH~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 131 FEYLHSKDIIYRDLKPENLLLDNK--GHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHHHHCCeeecCCCHHHEEECCC--CCEEEeeccCceEcCC
Confidence 778899999999999999999865 8999999999987754
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.2e-12 Score=144.78 Aligned_cols=135 Identities=21% Similarity=0.294 Sum_probs=90.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+........ . .+.+|.
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~------~~~~E~ 123 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVR------------------------------R------QICREI 123 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHH------------------------------H------HHHHHH
Confidence 57999999999999974 7999999997643221110 0 123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHH---HHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~~~ 278 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... .... .++..++..
T Consensus 124 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~~qi~~a- 180 (353)
T PLN00034 124 EILRDVNH-----------------PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVARQILSG- 180 (353)
T ss_pred HHHHhCCC-----------------CCcceeeeEeccCCeEEEEEecCCCCccccccc-----CCHHHHHHHHHHHHHH-
Confidence 44444322 00122222222 455689999999998865321 1222 233333333
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 181 L~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 181 IAYLHRRHIVHRDIKPSNLLINSA--KNVKIADFGVSRILA 219 (353)
T ss_pred HHHHHHCCEeecCCCHHHEEEcCC--CCEEEcccccceecc
Confidence 678899999999999999999865 899999999987664
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.1e-12 Score=144.06 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=89.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+. + .+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~-----------------------~----------~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDV-----------------------E----------CTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------H----------HHHHHH
Confidence 57999999999999974 68899999976532100 0000 0 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+.+ .-.|+.++ . ....++||||++|.+|.+... ....+....+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (324)
T cd05587 52 RVLALPGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPHAVFYAAEIA 111 (324)
T ss_pred HHHHhcCC-------------------CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33333211 11233332 2 355689999999998876532 122344444444444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 112 ~al~~lH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~~~~ 150 (324)
T cd05587 112 IGLFFLHSKGIIYRDLKLDNVMLDAE--GHIKIADFGMCKE 150 (324)
T ss_pred HHHHHHHHCCeEecCCCHHHeEEcCC--CCEEEeecCccee
Confidence 778999999999999999999865 8999999998764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.9e-13 Score=137.87 Aligned_cols=143 Identities=19% Similarity=0.194 Sum_probs=89.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEE-ecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKV-QHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV-~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||.||||.|||+.. .+|..||.|- +.-.+...-. ..+..|++..+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~r------------------------------q~~v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKAR------------------------------QDCVKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHH------------------------------HHHHHHHHHHHh
Confidence 5799999999999984 7999999983 3222222222 222233333333
Q ss_pred HH--HHHHHHH-HhcCCCCCCCCCCCCCCCCceEeeeeeecCC-CeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHH
Q 002092 202 AE--NTRIVSA-NLGCKNKHEDSNKKPAYEVDVLIPEVIQSSE-TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEI 274 (968)
Q Consensus 202 a~--n~~~~~~-~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~-~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l 274 (968)
.+ |+.++.+ .|.. ..+ -.||||+|+++.|++..+--+ .-+..+.+-..+
T Consensus 75 L~HpNIVqYy~~~f~~------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f 130 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFIE------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF 130 (375)
T ss_pred cCCchHHHHHHHhhhc------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence 22 3333332 2110 122 358999999999988754321 123344444444
Q ss_pred HHHH--HHHHHh--cC--ccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 275 TRAY--AHQIYV--DG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 275 ~~~~--l~~i~~--~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
++++ +..+|. .. ++|||+||+||+++.. |.++|.|||+.+.++.+.
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~--gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN--GVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheEEcCC--CceeeccchhHhHhcchh
Confidence 4444 334444 33 9999999999999965 899999999999987654
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.6e-12 Score=145.06 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=58.2
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 77 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~--~~~kl~DfG~~~ 153 (332)
T cd05614 77 EAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE--GHVVLTDFGLSK 153 (332)
T ss_pred CCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC--CCEEEeeCcCCc
Confidence 345689999999998876542 223345554444443433 788999999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
.+
T Consensus 154 ~~ 155 (332)
T cd05614 154 EF 155 (332)
T ss_pred cc
Confidence 65
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.9e-12 Score=144.31 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=89.9
Q ss_pred cccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.||.|++|.||+|+. .+|+.||+|+.+...... ..+ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~---------------------------------~~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDE---------------------------------VAHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHHH
Confidence 589999999999997 479999999976432100 000 001223444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~ 109 (323)
T cd05595 48 VLQNTRH-----------------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALE 109 (323)
T ss_pred HHHhCCC-----------------CCCcceeeEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 4443322 00111222222 455689999999998865432 222344444444444433 77
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 110 ~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~ 144 (323)
T cd05595 110 YLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHHCCeEecCCCHHHEEEcCC--CCEEecccHHhcc
Confidence 8899999999999999999865 8999999998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.5e-12 Score=143.40 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=57.8
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~iv~Ey~~~g~L~~~i~-~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~--~~~kL~DfG~~~ 144 (320)
T cd05590 68 PDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCK 144 (320)
T ss_pred CCEEEEEEcCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeeCCCCe
Confidence 455689999999998876532 223345444444444433 778999999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 145 ~~ 146 (320)
T cd05590 145 EG 146 (320)
T ss_pred ec
Confidence 53
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-12 Score=146.75 Aligned_cols=150 Identities=13% Similarity=0.148 Sum_probs=101.9
Q ss_pred Cccccccccc-cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d-~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
.|+..++++. .++||+||||.||||+.+. +||||++.-.-...- - ++
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~--q-----------------------lq----- 433 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPE--Q-----------------------LQ----- 433 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHH--H-----------------------HH-----
Confidence 3444454444 3799999999999999853 799998753221100 0 01
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
-|++|..++++-|+.- -+.+=-........+|+.||+|-+|.......+..++..++.
T Consensus 434 -----aFKnEVa~lkkTRH~N-----------------IlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~i 491 (678)
T KOG0193|consen 434 -----AFKNEVAVLKKTRHEN-----------------ILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTI 491 (678)
T ss_pred -----HHHHHHHHHhhcchhh-----------------heeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHH
Confidence 2677888887776521 011000001233479999999999998766555555555544
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+.-++. +.++|.++|||+|+|--||++.++ ++++|.|||++..-
T Consensus 492 dIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~--~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 492 DIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED--LKVKIGDFGLATVK 538 (678)
T ss_pred HHHHHHHHhhhhhhhhhhhhhhccccceEEccC--CcEEEecccceeee
Confidence 4444443 778999999999999999999865 89999999997653
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.9e-12 Score=142.46 Aligned_cols=139 Identities=16% Similarity=0.108 Sum_probs=89.2
Q ss_pred cccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.||+|++|+||+|+. .+|+.||||+.+...... - .+ ...+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----~-----------------------~~-------~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----K-----------------------DE-------VAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----h-----------------------hH-------HHHHHHHHH
Confidence 589999999999986 489999999976432100 0 00 001223444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
.+..+.+ +. +.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 ~l~~~~h------------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~aL 108 (325)
T cd05594 48 VLQNSRH------------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSAL 108 (325)
T ss_pred HHHhCCC------------------CCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 3333221 11 11112222 455689999999998865432 222345555444444443 7
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|. .|++|||+||.|||++.+ +.++|+|||++...
T Consensus 109 ~~lH~~~~ivHrDikp~NIll~~~--~~~kL~Dfg~~~~~ 146 (325)
T cd05594 109 DYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKEG 146 (325)
T ss_pred HHHHhcCCEEecCCCCCeEEECCC--CCEEEecCCCCeec
Confidence 78896 799999999999999865 89999999998653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.33 E-value=6e-12 Score=140.13 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEeCC-----------------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHH
Q 002092 124 TPLATASIAQVHRATLVD-----------------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~-----------------G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (968)
+.||+|++|.||+|+.++ +..||||+.++.......
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------- 63 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR--------------------------- 63 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHH---------------------------
Confidence 579999999999998532 347999998875432111
Q ss_pred HHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc--
Q 002092 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-- 263 (968)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-- 263 (968)
.+|.+|.+.+.++++ ..-+.+-..+. ....+|||||++|.+|.+.......
T Consensus 64 ---------~~~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 117 (304)
T cd05096 64 ---------NDFLKEVKILSRLKD-----------------PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDD 117 (304)
T ss_pred ---------HHHHHHHHHHhhcCC-----------------CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccc
Confidence 123445555554422 01122222222 4567899999999998876432110
Q ss_pred ----------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 264 ----------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 264 ----------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~DfG~~~~~~ 189 (304)
T cd05096 118 KEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN--LTIKIADFGMSRNLY 189 (304)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC--ccEEECCCccceecc
Confidence 112223333333332 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.5e-12 Score=142.98 Aligned_cols=141 Identities=18% Similarity=0.242 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+... .+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~~~~------~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----------------------------QETVS------FFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------hhHHH------HHHHHH
Confidence 57999999999999974 79999999876421100 00000 122233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+..+.+ -.|++++ . ....+|||||++|.+|.++.......++...+...+.+++
T Consensus 53 ~i~~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (330)
T cd05601 53 DILSISNS--------------------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV 112 (330)
T ss_pred HHHHhCCC--------------------CCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33222211 1122222 2 4556899999999998876543223445444444333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~aL~~lH~~~i~H~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 113 LAIHSVHQMGYVHRDIKPENVLIDRT--GHIKLADFGSAARLTA 154 (330)
T ss_pred HHHHHHHHCCeEcccCchHheEECCC--CCEEeccCCCCeECCC
Confidence 788999999999999999999865 8999999999987653
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-11 Score=127.95 Aligned_cols=184 Identities=20% Similarity=0.253 Sum_probs=125.8
Q ss_pred cccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHh-CCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA-EPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~-~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+|.+|--+.||+|...++..|||||.+......-. ++....--..+ ....+...++..|. +.|.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~-----~~~Yi~gd~Rf~~~~~~rr~lv~~W~---------~kEf~ 120 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR-----IRRYIQGDPRFRNSRSNRRKLVFAWA---------RKEFR 120 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhh-----HHHHHhcChhhhcCCCCHHHHHHHHH---------HHHHH
Confidence 89999999999999888999999999876543211 11111000000 11123333444443 46888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCC---CHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV---NKQKVVEEITRAYAH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~---~~~~l~~~l~~~~l~ 280 (968)
|+.++.+ .+|.||+++..-++||||||+... -...-.+...+. ....+.+.+++.+-.
T Consensus 121 NL~R~~e------------------AGVrvP~Pi~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~ 181 (268)
T COG1718 121 NLKRAYE------------------AGVRVPEPIAFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRR 181 (268)
T ss_pred HHHHHHH------------------cCCCCCCceeecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHH
Confidence 9998875 369999999999999999999643 111111222221 234455566666555
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
++...|++|+|+..-|||+. + +.+++||||.+....... ...++.+|...+...|...|+.
T Consensus 182 l~~~a~LVHgDLSEyNiL~~-~--~~p~iID~~QaV~~~hp~-------a~e~L~RDv~Ni~~fF~r~gv~ 242 (268)
T COG1718 182 LYKEAGLVHGDLSEYNILVH-D--GEPYIIDVSQAVTIDHPN-------AFEFLERDVRNIARFFRRKGVE 242 (268)
T ss_pred HHHhcCcccccchhhheEEE-C--CeEEEEECccccccCCCc-------hHHHHHHHHHHHHHHHHHcCCC
Confidence 55669999999999999997 3 789999999998876433 2344678999999999999985
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.5e-12 Score=142.65 Aligned_cols=142 Identities=19% Similarity=0.182 Sum_probs=89.9
Q ss_pred ccccccceeEEEEEEe----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|+. .+|+.||||+.+.... ..+.. ....+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~---~~~~~------------------------------~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI---VRNQK------------------------------DTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH---Hhhhh------------------------------hHHHHH
Confidence 4689999999999985 3689999998763210 00000 011133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.|...+.++.+ ..-+.+-..+. ....++||||++|.+|.+.... ........+...+.+++
T Consensus 49 ~E~~il~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 110 (323)
T cd05584 49 AERNILEAVKH-----------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEIS 110 (323)
T ss_pred HHHHHHHhCCC-----------------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 45545444422 00112222222 4556899999999998765321 22233333333333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|+|+||.|||++.+ +.++|+|||+++..
T Consensus 111 ~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 150 (323)
T cd05584 111 LALEHLHQQGIIYRDLKPENILLDAQ--GHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHHCCeecCCCCHHHeEECCC--CCEEEeeCcCCeec
Confidence 778999999999999999999865 89999999998643
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.5e-12 Score=141.78 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=57.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~--~~~kL~Dfg~~~ 144 (321)
T cd05591 68 KDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE--GHCKLADFGMCK 144 (321)
T ss_pred CCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEeecccce
Confidence 345689999999998865532 222344444444333333 788999999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 145 ~~ 146 (321)
T cd05591 145 EG 146 (321)
T ss_pred ec
Confidence 53
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.8e-12 Score=145.32 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=91.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||+|+........ ..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSD---------------------------------SAFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhh---------------------------------HHHHHHHH
Confidence 56999999999999975 68999999874210000 000 00122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+-..+. ....++||||++|++|.++.. ....+...+...+.+++ +
T Consensus 95 ~i~~~~~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~~~~~~~~~~~~qil~aL 155 (370)
T cd05621 95 DIMAFANS-----------------PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 33332211 11122222222 455789999999999987643 33444444443333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 156 ~~LH~~~IvHrDLKp~NILl~~~--~~~kL~DFG~a~~~~ 193 (370)
T cd05621 156 DAIHSMGLIHRDVKPDNMLLDKH--GHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHCCeEecCCCHHHEEECCC--CCEEEEecccceecc
Confidence 88999999999999999999865 899999999988764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-12 Score=144.34 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=35.2
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.||+++.+ +.++|+|||+++.+.
T Consensus 187 L~~LH~~~ivHrDiKp~Nil~~~~--~~~kl~DfG~a~~~~ 225 (338)
T cd05102 187 MEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 225 (338)
T ss_pred HHHHHHCCEECCCCccceEEEcCC--CcEEEeecccccccc
Confidence 778899999999999999999865 899999999988654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.5e-12 Score=145.45 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=89.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+. .+++.||||+.+.... .. .+... .+.+|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LL--------------------------RNQVA------HVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hh--------------------------HHHHH------HHHHHH
Confidence 5799999999999997 4789999998753110 00 00000 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-..+. ....+|||||++|++|.+... ....+....+...+.+++ +
T Consensus 53 ~il~~~~h-----------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~al 114 (382)
T cd05625 53 DILAEADN-----------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELTCAV 114 (382)
T ss_pred HHHHhCCC-----------------CcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 44433321 00112222222 455689999999998876532 112233333333333332 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||.|||++.+ |.++|+|||++..+
T Consensus 115 ~~lH~~~ivHrDlKp~NILl~~~--g~~kL~DFGla~~~ 151 (382)
T cd05625 115 ESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (382)
T ss_pred HHHHhCCeecCCCCHHHEEECCC--CCEEEeECCCCccc
Confidence 78999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=125.09 Aligned_cols=128 Identities=23% Similarity=0.379 Sum_probs=92.1
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+|++.|..++||+++. +|+.|+||+.+++.. ...++..|++
T Consensus 4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~~ 44 (170)
T cd05151 4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE--------------------------------------LLINRENEAE 44 (170)
T ss_pred eecCCcccCceEEEEE-CCeEEEEEeCCCCcc--------------------------------------cccCHHHHHH
Confidence 6899999999999987 488999998665421 1234567888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (968)
.+..+.+. ..+|+++. .+..++||||++|.++.+.. .........+.+. +..
T Consensus 45 ~l~~l~~~-------------------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~------~~~~~~~~~l~~~-l~~ 98 (170)
T cd05151 45 NSKLAAEA-------------------GIGPKLYYFDPETGVLITEFIEGSELLTED------FSDPENLEKIAKL-LKK 98 (170)
T ss_pred HHHHHHHh-------------------CCCCceEEEeCCCCeEEEEecCCCcccccc------ccCHHHHHHHHHH-HHH
Confidence 88877642 23677775 44579999999999887531 1112233444433 556
Q ss_pred HHhcC-----ccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 282 IYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 282 i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+|..+ ++|+|+||+||+++ + +++++||||.+..-+
T Consensus 99 LH~~~~~~~~~~HgD~~~~Nil~~-~--~~~~liDf~~a~~~~ 138 (170)
T cd05151 99 LHSSPLPDLVPCHNDLLPGNFLLD-D--GRLWLIDWEYAGMND 138 (170)
T ss_pred HhCCCCCCceeecCCCCcCcEEEE-C--CeEEEEecccccCCC
Confidence 78776 59999999999998 3 689999999987543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.7e-12 Score=141.12 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=89.3
Q ss_pred ccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
||.|++|.||+|+.+ +|+.||||+.+...... ..+ ...+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSE---------------------------------VTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHHH
Confidence 689999999999975 68999999875321000 000 0012234444
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
+.++.+ +. +.+-..+. ....++||||++|.+|.+.... ...++...+...+.+++ +.
T Consensus 47 l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 107 (312)
T cd05585 47 LAQVNC------------------PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALE 107 (312)
T ss_pred HHhCCC------------------CcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 444321 11 11112222 4567899999999998765432 22344444444333333 77
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+|..|++|||+||.||+++.+ +.++|+|||+++..
T Consensus 108 ~lH~~~i~HrDlkp~Nili~~~--~~~kl~Dfg~~~~~ 143 (312)
T cd05585 108 NLHKFNVIYRDLKPENILLDYQ--GHIALCDFGLCKLN 143 (312)
T ss_pred HHHhCCeEeCCCCHHHeEECCC--CcEEEEECcccccC
Confidence 8999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.7e-12 Score=142.38 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=91.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+..-. .. ... .-.+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~--------------------------~~~------~~~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LK--------------------------RAE------TACFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hh--------------------------hhh------HHHHHHHH
Confidence 57999999999999974 799999998753100 00 000 00122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+..+.+ -.|+.++ . ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 53 DVLVNGDR--------------------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHhCCC--------------------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33322211 1122222 2 4556899999999999876532223344444444333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLDKN--GHIRLADFGSCLRLLA 154 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEECCC--CCEEEEECCceeecCC
Confidence 778999999999999999999865 8999999999876543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.7e-12 Score=144.90 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=92.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+..-. .. .+... .+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LE--------------------------KEQVA------HVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hhHHH------HHHHHH
Confidence 57999999999999974 799999998753200 00 00000 122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+..+.+ -.|++++ . ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 53 DILAEADN--------------------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHhCCC--------------------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33333321 1122232 2 455789999999998877643 222344444444444443
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLDAK--GHIKLSDFGLCTGLKK 153 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEECCC--CCEEEeecccceeccc
Confidence 778999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3e-12 Score=138.43 Aligned_cols=79 Identities=23% Similarity=0.241 Sum_probs=55.2
Q ss_pred eEEecccCCCCCCCHHHHH---hcCC---CHHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 243 VLILEFMDGIRLNDCESLE---AFGV---NKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~---~~~~---~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
-|||||++ .+|.+....- ...+ +.+....++.+. +..||.+|++|||+||.|+||+.+ +|.++|+|||.++
T Consensus 98 nlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrg-l~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK 174 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRG-LAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAK 174 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHH-HHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCcce
Confidence 37999996 4554442210 1112 223344444444 567888999999999999999976 6999999999999
Q ss_pred ccCHHHHH
Q 002092 317 KLSSSMKQ 324 (968)
Q Consensus 317 ~l~~~~r~ 324 (968)
.+.+.+..
T Consensus 175 ~L~~~epn 182 (364)
T KOG0658|consen 175 VLVKGEPN 182 (364)
T ss_pred eeccCCCc
Confidence 98765543
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.9e-12 Score=141.70 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=59.6
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|++|.++.......+....+...+.+++ ++.+|..|++|+|+||+||+++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~--~~~kl~DfG~a~ 150 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMN--GHIRLADFGSCL 150 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCC--CCEEEEecccee
Confidence 4556899999999999877543223344444433333332 778899999999999999999865 899999999987
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 151 ~~~~ 154 (331)
T cd05624 151 KMNQ 154 (331)
T ss_pred eccC
Confidence 6653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-11 Score=128.93 Aligned_cols=180 Identities=19% Similarity=0.230 Sum_probs=126.0
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
++||-|-=+-||.|...+|.+||||+-|-|.. .+. .+.+.-......-...++.- .-+.-.+|.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFr-------kvk~~R~y~~~~~h~sWl~~-------sRl~A~rEf~ 161 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFR-------KVKRNRDYLADKEHGSWLYV-------SRLAAEREFE 161 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hhh-------hhcchhhhhccccCcchhhh-------HHHHHHHHHH
Confidence 68999999999999999999999999988743 211 11111111000111111110 1112234555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.+.++.. .++.||+|+.-+++++|||+++|..|....- ...+...++..+++.+-.. .
T Consensus 162 ~L~~L~~------------------~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~~-~ 219 (304)
T COG0478 162 ALQRLYP------------------EGVKVPKPIAWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRKA-Y 219 (304)
T ss_pred HHHHhhh------------------cCCCCCCccccccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHHH-H
Confidence 6666542 3588999999999999999999999987531 2345677787777765444 4
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcC
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g 349 (968)
+.|++|+|+.+-||+|++| |.+++|||-.+...+.+.-..+ +.+|.+.+++.|++-.
T Consensus 220 ~~GiVHGDlSefNIlV~~d--g~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky 276 (304)
T COG0478 220 RRGIVHGDLSEFNILVTED--GDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKY 276 (304)
T ss_pred HcCccccCCchheEEEecC--CCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhc
Confidence 8999999999999999976 8999999999988876654443 5788888888887654
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.5e-12 Score=142.74 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=89.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+...... ..+. -.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999876321100 0000 0112233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+.+ .+ .|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-----------------~~--~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~ 111 (323)
T cd05615 52 RVLALQDK-----------------PP--FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEIS 111 (323)
T ss_pred HHHHhccC-----------------CC--chhheeeEEecCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33222211 11 122222 2 345689999999998876532 122345555544444443
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrDikp~Nill~~~--~~ikL~Dfg~~~~~ 151 (323)
T cd05615 112 VGLFFLHRRGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEH 151 (323)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEEecccccccc
Confidence 778999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.3e-12 Score=141.28 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=90.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 68999999999999975 79999999875321100 001123454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+..++. ....++||||++| .+.+........+....+...+.+++ +
T Consensus 55 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 55 SLLKGLKH-----------------ANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred HHHhhCCC-----------------CCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 44444322 11223333333 4557899999976 33332221122345555544444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 153 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDT--GELKLADFGLARAK 153 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECCCCcceec
Confidence 78999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.1e-12 Score=141.79 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=57.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~a~ 144 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQ-SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC--CCEEEccCcCCe
Confidence 345689999999999876543 222344444444444433 778999999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 145 ~~ 146 (316)
T cd05592 145 EN 146 (316)
T ss_pred EC
Confidence 54
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-11 Score=139.54 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=56.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~--~~~kL~DfG~~~ 144 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEEeecCCcc
Confidence 456789999999998865432 222344444444333333 788999999999999999999865 899999999986
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 145 ~ 145 (325)
T cd05604 145 E 145 (325)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.7e-12 Score=142.08 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=57.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~--~~~kl~Dfg~~~ 144 (316)
T cd05620 68 KEHLFFVMEFLNGGDLMFHIQ-DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEECCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEeCccCCCe
Confidence 455689999999998876532 222344444444444433 778999999999999999999865 899999999876
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 145 ~ 145 (316)
T cd05620 145 E 145 (316)
T ss_pred e
Confidence 4
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.3e-12 Score=144.12 Aligned_cols=140 Identities=16% Similarity=0.174 Sum_probs=91.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+....-. ...+ ... .+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~--------------------------~~~------~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKD--------------------------QLA------HVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhH--------------------------HHH------HHHHHH
Confidence 5799999999999987 4899999998643100 0000 000 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ + .|++++. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 53 ~il~~l~h------------------p--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~ 111 (377)
T cd05629 53 DVLAESDS------------------P--WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHhCCC------------------C--CcceEEEEEEcCCeeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44333221 1 2333332 456789999999999877643 122334433333333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~~~--~~~kl~DfGla~~~~~ 153 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILIDRG--GHIKLSDFGLSTGFHK 153 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 788999999999999999999865 8999999999976543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-12 Score=144.23 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+.. +|+.||||+.+....... . ....+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~---------------------------------~~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR-N---------------------------------QIAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhc-c---------------------------------HHHHHHHHH
Confidence 57999999999999974 799999998763211000 0 000122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+.+ -.|++++ . ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 53 DILADADS--------------------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR-KDVFPEETARFYIAELV 111 (350)
T ss_pred HHHHhcCC--------------------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333221 1122222 2 4556899999999998776432 23444444444444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~LH~~giiH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 112 LALDSVHKLGFIHRDIKPDNILIDAD--GHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEeecCCCCccCcc
Confidence 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.2e-12 Score=135.19 Aligned_cols=139 Identities=22% Similarity=0.242 Sum_probs=94.5
Q ss_pred ccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 126 LATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 126 lgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
||.|++|.||+|+.+ ++..||||+..+....... -.|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~------------------------------------~~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVR------------------------------------DEMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHH------------------------------------HHHHHHH
Confidence 899999999999863 4567999987654321110 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
..+.++.+ ..-+.+..++.....++||||++|.+|.+.........+...+...+.++. +.
T Consensus 47 ~~l~~l~h-----------------~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 109 (257)
T cd05115 47 EIMHQLDN-----------------PYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMK 109 (257)
T ss_pred HHHHhcCC-----------------CCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 55554422 112233333334567899999999999876543333455555555555544 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 ~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 146 (257)
T cd05115 110 YLEGKNFVHRDLAARNVLLVNQ--HYAKISDFGLSKALG 146 (257)
T ss_pred HHHhcCeeecccchheEEEcCC--CcEEeccCCcccccc
Confidence 7899999999999999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-12 Score=139.19 Aligned_cols=139 Identities=16% Similarity=0.135 Sum_probs=88.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+....... ...+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------------------------------PCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc------------------------------------chhHHHHH
Confidence 57999999999999974 789999998753211000 01123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++| +|.+.............+...+.++. +
T Consensus 55 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 116 (288)
T cd07871 55 SLLKNLKH-----------------ANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGL 116 (288)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44444422 01122222222 3446899999997 55544322222234444333333333 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|+|+||.|||++.+ ++++|+|||++...
T Consensus 117 ~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~DfG~~~~~ 153 (288)
T cd07871 117 SYCHKRKILHRDLKPQNLLINEK--GELKLADFGLARAK 153 (288)
T ss_pred HHHHhCCcccCCCCHHHEEECCC--CCEEECcCcceeec
Confidence 78899999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.4e-12 Score=140.87 Aligned_cols=77 Identities=14% Similarity=0.170 Sum_probs=57.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kL~DfG~~~ 149 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQ-QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCK 149 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC--CcEEEccCCCce
Confidence 345689999999998876532 222345445444444443 778899999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 150 ~~ 151 (323)
T cd05616 150 EN 151 (323)
T ss_pred ec
Confidence 54
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=137.26 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=90.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+........ .+ ..-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LK------------------------------QEQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hH------------------------------HHHHHHHHH
Confidence 57999999999999974 79999999875321100 00 000122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+.++.+ -.|.+++. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 53 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (291)
T cd05612 53 RVLKEVSH--------------------PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHhCCC--------------------CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333211 11122221 3445799999999998776432 22344444444344433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~~~--~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLDKE--GHIKLTDFGFAKKLRD 153 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEEEecCcchhccC
Confidence 778899999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.6e-12 Score=143.24 Aligned_cols=141 Identities=17% Similarity=0.170 Sum_probs=91.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+........ .. ....+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 57999999999999974 78999999875310000 00 000122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+...+. ....+|||||++|++|.++. ....+....+...+.+++ +
T Consensus 95 ~il~~~~h-----------------~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~l~~~~~~~~~~qi~~aL 155 (370)
T cd05596 95 DIMAHANS-----------------EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM--SNYDIPEKWARFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCC-----------------CCcceEEEEEecCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33333211 11122222232 44568999999999998763 333444444433333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 156 ~~LH~~~ivHrDLkp~NILl~~~--~~~kL~DfG~~~~~~ 193 (370)
T cd05596 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHCCeeccCCCHHHEEEcCC--CCEEEEeccceeecc
Confidence 88999999999999999999865 899999999987664
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.2e-12 Score=140.58 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=57.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.+..+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||+++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~--~~~kL~DfG~~~ 144 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCK 144 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC--CCEEEeeCCccc
Confidence 456789999999998865432 222344444444333433 778899999999999999999865 899999999986
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 145 ~ 145 (329)
T cd05618 145 E 145 (329)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.8e-12 Score=142.83 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=91.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +++.||+|+....... -..+. -.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~---------------------------------~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDS---------------------------------AFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 57999999999999975 7899999987521000 00000 0122233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ...+.+-..+. ....++||||++|.+|.++. ....++...+...+.+++ +
T Consensus 95 ~i~~~~~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~--~~~~~~~~~~~~~~~qi~~aL 155 (371)
T cd05622 95 DIMAFANS-----------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLAL 155 (371)
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33332211 01122222222 45568999999999998764 333444444433333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~ivHrDLkp~NIll~~~--~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 194 (371)
T ss_pred HHHHHCCEEeCCCCHHHEEECCC--CCEEEEeCCceeEcCc
Confidence 88999999999999999999865 8999999999887653
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=138.57 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=57.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~--~~~kl~Dfg~~~ 144 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeccCCCc
Confidence 4556899999999988665331 22344444443333333 778999999999999999999865 899999999986
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 145 ~~ 146 (323)
T cd05575 145 EG 146 (323)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=139.67 Aligned_cols=137 Identities=17% Similarity=0.160 Sum_probs=89.3
Q ss_pred cccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.||+|++|.||+|+. .+++.||||+.+...... -.. .. .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~------------------------~~------~~~~e~~ 47 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----DED------------------------ID------WVQTEKH 47 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhH------------------------HH------HHHHHHH
Confidence 589999999999997 478999999986432110 000 00 1223333
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ ++ .|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 48 ~~~~~~~-----------------~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (327)
T cd05617 48 VFEQASS-----------------NP--FLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLPEEHARFYAAEICI 107 (327)
T ss_pred HHHhhcC-----------------CC--CEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333211 11 233333 2 455689999999998865432 122344444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 108 al~~lH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~~~~ 145 (327)
T cd05617 108 ALNFLHERGIIYRDLKLDNVLLDAD--GHIKLTDYGMCKE 145 (327)
T ss_pred HHHHHHHCCeeccCCCHHHEEEeCC--CCEEEecccccee
Confidence 778999999999999999999865 8999999998864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=136.52 Aligned_cols=142 Identities=16% Similarity=0.163 Sum_probs=91.1
Q ss_pred ccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
||+|++|.||++..+ +|+.||||+......... ..+ -.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---------------------------~~~-------~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR---------------------------KGY-------EGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh---------------------------HHH-------HHHHHHHHH
Confidence 689999999999874 899999998653211000 000 012345444
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHHHH--
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~-- 278 (968)
+.++.+ ...+.+-..+. ....+|||||++|.+|.+.... ....++...+...+.+++
T Consensus 47 l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~ 109 (280)
T cd05608 47 LAKVHS-----------------RFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG 109 (280)
T ss_pred HHhCCC-----------------CcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence 444321 11122222232 4557899999999998755321 112344555444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 110 LEHLHQRRIIYRDLKPENVLLDND--GNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCccceecCC
Confidence 778999999999999999999865 8899999999876643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.4e-12 Score=143.27 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=91.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||.||+|.||||+.| +++.||+|+....- +-..|++.++.-++ ..++.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g--r~~k~l~~l~~ev~---------------------------i~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG--RNEKELKNLRQEVR---------------------------ILRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcC--CchHHHHHHHHHHH---------------------------HHHhc
Confidence 46899999999999975 78999999864221 12233443332222 22221
Q ss_pred --HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcC-CCHHHHHHHHHHHH-
Q 002092 203 --ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY- 278 (968)
Q Consensus 203 --~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~- 278 (968)
.|+..+.+.|+. +.+-++|.||+.| .|..+.. ..+ +..+.+-....+.+
T Consensus 59 kHpniv~m~esfEt------------------------~~~~~vVte~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVs 111 (808)
T KOG0597|consen 59 KHPNIVEMLESFET------------------------SAHLWVVTEYAVG-DLFTILE--QDGKLPEEQVRAIAYDLVS 111 (808)
T ss_pred CCcchhhHHHhhcc------------------------cceEEEEehhhhh-hHHHHHH--hccCCCHHHHHHHHHHHHH
Confidence 133344443331 4556899999999 7666533 222 23333333333332
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++.+|..+++|||+||.|||+... |.++|+|||+++..+.
T Consensus 112 aL~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 112 ALYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMST 152 (808)
T ss_pred HHHHHHhcCcccccCCcceeeecCC--Cceeechhhhhhhccc
Confidence 788999999999999999999854 8999999999988765
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=138.82 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=56.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+.... ........+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~--~~~kl~DfG~a~ 144 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 144 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEEccCCCCc
Confidence 4556899999999988765432 22233333333333333 678899999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 145 ~~ 146 (325)
T cd05602 145 EN 146 (325)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.9e-12 Score=140.32 Aligned_cols=139 Identities=19% Similarity=0.161 Sum_probs=89.4
Q ss_pred cccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 125 plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.||.|++|.||+|+.+ +|+.||||+.+......- .++ + .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~-----------------------~----------~~~~e~~ 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDI-----------------------D----------WVQTEKH 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH-----------------------H----------HHHHHHH
Confidence 5899999999999974 789999999864321100 000 0 0122333
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCC-ceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
.+.++.+ ++ -+.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 il~~~~~-----------------hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~l 109 (329)
T cd05588 48 VFETASN-----------------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 109 (329)
T ss_pred HHHhccC-----------------CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 3332211 11 112222222 455689999999998865532 223455554444444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
..+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 110 ~~lH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~ 145 (329)
T cd05588 110 NFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHCCeEecCCCHHHeEECCC--CCEEECcCccccc
Confidence 78999999999999999999865 8999999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=138.15 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=56.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~ 144 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEccCCCCc
Confidence 455689999999998865432 122344444333333333 778899999999999999999865 899999999987
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 145 ~ 145 (321)
T cd05603 145 E 145 (321)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.4e-12 Score=140.50 Aligned_cols=142 Identities=15% Similarity=0.118 Sum_probs=90.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++.....- .+.+ .+..|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~---------------------------------~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR-DEVE---------------------------------SLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-hHHH---------------------------------HHHHHH
Confidence 4689999999999997 4799999999864321000 0000 112232
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+..++. +. ++. +.+-..+. ....++||||++|.+|.... ....++...+...+.+++
T Consensus 51 ~~~~~~~~-l~--------------hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~a 113 (324)
T cd05589 51 RIFETANS-ER--------------HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI--HTDVFSEPRAVFYAACVVLG 113 (324)
T ss_pred HHHHhccc-cC--------------CCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHH
Confidence 22222211 10 111 22222222 45578999999998886542 333455555554444443
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 114 l~~lH~~~ivHrdlkp~Nill~~~--~~~kL~Dfg~~~~~ 151 (324)
T cd05589 114 LQYLHENKIVYRDLKLDNLLLDTE--GFVKIADFGLCKEG 151 (324)
T ss_pred HHHHHhCCeEecCCCHHHeEECCC--CcEEeCcccCCccC
Confidence 778999999999999999999865 89999999987653
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.8e-12 Score=141.03 Aligned_cols=157 Identities=20% Similarity=0.246 Sum_probs=96.5
Q ss_pred HhhhCCCccccccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcch
Q 002092 107 EREFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (968)
Q Consensus 107 ~~elg~~~~~~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (968)
++|+++...++...+. .++||+|++|+||+|+. .+++.||||+.......... . +
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~---~------------------ 59 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH--A---R------------------ 59 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH--H---H------------------
Confidence 4555555555555554 37899999999999997 57899999987643211100 0 0
Q ss_pred HHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee-------ecCCCeEEecccCCCCCCCH
Q 002092 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-------QSSETVLILEFMDGIRLNDC 257 (968)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-------~~~~~vLVmE~i~G~~L~~~ 257 (968)
.+.+|.+.+.++.+. .-+.+..++ .....+++||++ |.+|.++
T Consensus 60 ------------~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 109 (343)
T cd07878 60 ------------RTYRELRLLKHMKHE-----------------NVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNI 109 (343)
T ss_pred ------------HHHHHHHHHHhcCCC-----------------chhhhhhhhcccccccccCcEEEEeecC-CCCHHHH
Confidence 011233333322210 000111111 023457999998 6666554
Q ss_pred HHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
. ....++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 110 ~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 110 V--KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED--CELRILDFGLARQADD 170 (343)
T ss_pred H--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC--CCEEEcCCccceecCC
Confidence 3 223455555444444443 678899999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=138.85 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=58.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~a~ 144 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT--GHIALCDFGLSK 144 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEecCCcCc
Confidence 456789999999998865532 223345555544444443 778999999999999999999865 899999999987
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 145 ~~ 146 (330)
T cd05586 145 AN 146 (330)
T ss_pred CC
Confidence 53
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.4e-12 Score=138.57 Aligned_cols=152 Identities=19% Similarity=0.274 Sum_probs=96.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||+|++|.|-+|+. .+|+.|||||+...-.. +.. .....+...+.+ ++ ..++|.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------~~~---~~~~~~a~~~~~-~e----------kv~~EI 159 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------RQY---GFPRQPAMKLMP-IE----------KVRREI 159 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------hhc---ccccccccccCc-HH----------HHHHHH
Confidence 5699999999999996 58999999997531100 000 000000000000 00 234566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH-HH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-AY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~-~~ 278 (968)
..++++.+ ...|..-+|.. +++-|||.|||..+.+...... ...+.. ..++..++ ..
T Consensus 160 ailKkl~H-----------------~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~-~~Ar~ylrDvv 220 (576)
T KOG0585|consen 160 AILKKLHH-----------------PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSE-QQARKYLRDVV 220 (576)
T ss_pred HHHHhcCC-----------------cCeeEEEEeecCcccCceEEEEEeccCCccccCCCC-cccccH-HHHHHHHHHHH
Confidence 67776643 22355556664 6778999999998888654210 000111 22222222 22
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++++|.+|++||||||.|+|++.+ |+++|.|||.+...+
T Consensus 221 ~GLEYLH~QgiiHRDIKPsNLLl~~~--g~VKIsDFGVs~~~~ 261 (576)
T KOG0585|consen 221 LGLEYLHYQGIIHRDIKPSNLLLSSD--GTVKISDFGVSNEFP 261 (576)
T ss_pred HHHHHHHhcCeeccccchhheEEcCC--CcEEeeccceeeecc
Confidence 889999999999999999999976 999999999987664
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-11 Score=136.07 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=58.6
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
...+.|||++|++|.+...-....+....+..-..++. +.+||.+||+|||+||.|||++.. ++.++|.|||+++.+
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKL 168 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccc
Confidence 35799999999999987542221234333333333333 788999999999999999999962 389999999999877
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 169 ~~ 170 (313)
T KOG0198|consen 169 ES 170 (313)
T ss_pred cc
Confidence 63
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.7e-11 Score=139.63 Aligned_cols=145 Identities=19% Similarity=0.206 Sum_probs=104.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|.||+||+++.+ +|+.+|+|+........-. ..-+..+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 57999999999999986 5999999987532211000 111345666
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.++++.. ....|.++.+|. ....+||||+++|+.|-+...-. .+.....+..+.+.. +
T Consensus 87 ~il~~l~~----------------hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av 148 (382)
T KOG0032|consen 87 AILQQLSG----------------HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAV 148 (382)
T ss_pred HHHHhccC----------------CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHH
Confidence 77776642 123577888886 56678999999999998764322 355554444444433 7
Q ss_pred HHHHhcCccccCCCCCceEEecCC--CCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 320 (968)
+++|..|++|||+||+|+|+.... +++++++|||++..+..
T Consensus 149 ~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 149 KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 889999999999999999998542 35899999999998876
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=136.55 Aligned_cols=139 Identities=21% Similarity=0.223 Sum_probs=91.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..||.|++|+||+|+. .+|+.||||+.+-..... +..+.+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 68 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR-------------------------------------RELLFNEV 68 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhH-------------------------------------HHHHHHHH
Confidence 4699999999999997 489999999753211100 00123343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+...+.+++ +
T Consensus 69 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l 129 (292)
T cd06657 69 VIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKAL 129 (292)
T ss_pred HHHHhcCC-----------------cchhheeeEEEeCCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHH
Confidence 33333221 01122222222 45678999999999987753 233345555444444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~givH~dl~p~Nilv~~~--~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 130 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 168 (292)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEcccccceeccc
Confidence 88999999999999999999865 8899999998876654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-11 Score=137.23 Aligned_cols=139 Identities=15% Similarity=0.133 Sum_probs=88.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +++.||||+.+...... .+..+.+|.
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 55 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 55 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------------------------------------cchhHHHHH
Confidence 57999999999999974 78999999875432110 001123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-..+. ....++||||+++ .+.+.........+...+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL 117 (309)
T cd07872 56 SLLKDLKH-----------------ANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGL 117 (309)
T ss_pred HHHHhCCC-----------------CCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 55544422 11122223332 4567899999986 44433221111234443333333332 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 118 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 154 (309)
T cd07872 118 AYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (309)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECccccceec
Confidence 78999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1e-11 Score=134.12 Aligned_cols=144 Identities=18% Similarity=0.223 Sum_probs=84.7
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+|||.|++|.|..|+. .+|+.||||-.. +.+..-+ ..++.. +|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~----~~F~~~~-------------------------~akRtl------RE 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL----NPFENQI-------------------------DAKRTL------RE 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh----hhhhchH-------------------------HHHHHH------HH
Confidence 48999999999999997 589999998321 0011000 011111 23
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcC--CCHHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG--VNKQKVVEEITRAY 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~--~~~~~l~~~l~~~~ 278 (968)
.+-++++++. +. .....+..|.... -.+-++|+|+++ +|+..+-+.+ +....+-.-+.+++
T Consensus 72 lklLr~~~He-----NI-------i~l~di~~p~~~~~f~DvYiV~elMe----tDL~~iik~~~~L~d~H~q~f~YQiL 135 (359)
T KOG0660|consen 72 LKLLRHLRHE-----NI-------IGLLDIFRPPSRDKFNDVYLVFELME----TDLHQIIKSQQDLTDDHAQYFLYQIL 135 (359)
T ss_pred HHHHHHhcCC-----Cc-------ceEEeecccccccccceeEEehhHHh----hHHHHHHHcCccccHHHHHHHHHHHH
Confidence 3444444421 00 0011233332111 345689999995 3443332222 22222222222222
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++.||..|++|||+||+|++++.+ ..++++|||+++.++
T Consensus 136 rgLKyiHSAnViHRDLKPsNll~n~~--c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 136 RGLKYIHSANVIHRDLKPSNLLLNAD--CDLKICDFGLARYLD 176 (359)
T ss_pred HhcchhhcccccccccchhheeeccC--CCEEeccccceeecc
Confidence 556778999999999999999976 789999999999995
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.6e-11 Score=136.94 Aligned_cols=140 Identities=19% Similarity=0.180 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+.+ +|..||+|+.+........ . .+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIR------------------------------N------QIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------H------HHHHHH
Confidence 56999999999999975 7899999998754321110 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++... ...+....+...+.++. +
T Consensus 55 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l 116 (331)
T cd06649 55 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 116 (331)
T ss_pred HHHHHCCC-----------------CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 44444422 11122223332 4567899999999999876432 22344443333333332 5
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|. +|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 117 AYLREKHQIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 155 (331)
T ss_pred HHHhhcCCEEcCCCChhhEEEcCC--CcEEEccCccccccc
Confidence 67776 479999999999999865 899999999987664
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.4e-11 Score=149.92 Aligned_cols=142 Identities=13% Similarity=0.096 Sum_probs=92.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.. +|+.||||+.+......- ... -.|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e----------------------------~~~------~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP----------------------------LLK------KRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 57999999999999974 799999998765432110 000 0234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh----------cCCCHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVV 271 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~----------~~~~~~~l~ 271 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++..... ...+...+.
T Consensus 54 ~ILs~L~H-----------------PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL 116 (932)
T PRK13184 54 KIAADLIH-----------------PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL 116 (932)
T ss_pred HHHHhCCC-----------------cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence 55544422 01122222222 455689999999999987643210 111222333
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+.++. +..+|..|++|||+||+||+++.+ ++++|+|||++..+
T Consensus 117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d--g~vKLiDFGLAk~i 163 (932)
T PRK13184 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLF--GEVVILDWGAAIFK 163 (932)
T ss_pred HHHHHHHHHHHHHHHCCccccCCchheEEEcCC--CCEEEEecCcceec
Confidence 3333332 678899999999999999999865 89999999999876
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.2e-11 Score=137.70 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=58.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|++|.++.......+....+...+.++. +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~--~~~kL~DfG~a~ 150 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCL 150 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC--CCEEEeecchhe
Confidence 4556899999999999877542223344443333333332 678899999999999999999865 899999999987
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 151 ~~~ 153 (332)
T cd05623 151 KLM 153 (332)
T ss_pred ecc
Confidence 653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.8e-11 Score=138.97 Aligned_cols=143 Identities=21% Similarity=0.141 Sum_probs=90.6
Q ss_pred ccccccceeEEEEEEeC--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||+|++|.||+|+.+ ++..||||+....... . -. ... .+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~--~~--------------------~~~----------~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--K--QK--------------------QVD----------HVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--h--hh--------------------hHH----------HHHHH
Confidence 68999999999999864 3468999976421100 0 00 000 13345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.+..+.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 82 ~~~l~~l~h-----------------p~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~a 143 (340)
T PTZ00426 82 RKILNYINH-----------------PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLR-RNKRFPNDVGCFYAAQIVLI 143 (340)
T ss_pred HHHHHhCCC-----------------CCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 544444322 00112222222 455689999999999877643 222344443333333332
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 144 L~~LH~~~ivHrDLkp~NILl~~~--~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 144 FEYLQSLNIVYRDLKPENLLLDKD--GFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHHHCCeEccCCCHHHEEECCC--CCEEEecCCCCeecCC
Confidence 778899999999999999999865 8999999999987653
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-12 Score=140.99 Aligned_cols=153 Identities=16% Similarity=0.214 Sum_probs=102.3
Q ss_pred CCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHH
Q 002092 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (968)
Q Consensus 112 ~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (968)
.++...|..++ -||.||||.||||.. ++++.||+||..-+-.+..-.|+
T Consensus 9 ~~~~~~~~~~~--~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIedi---------------------------- 58 (467)
T KOG0201|consen 9 IDPELLYTKLE--LIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDI---------------------------- 58 (467)
T ss_pred CCcccccccch--hccccccceeeeeeeccccceEEEEEechhhcchhhHHH----------------------------
Confidence 35566777774 699999999999996 68999999997533221111111
Q ss_pred hhhhccCcHHHHH--HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCC-CH
Q 002092 191 EAPKELDFNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV-NK 267 (968)
Q Consensus 191 ~l~~Eld~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~-~~ 267 (968)
.+|+.+..+.+ |+.+.... .+..+.-.++||||.|+++.++.+. .+. +.
T Consensus 59 --qqei~~Ls~~~~~~it~yygs------------------------yl~g~~LwiiMey~~gGsv~~lL~~--~~~~~E 110 (467)
T KOG0201|consen 59 --QQEISVLSQCDSPNITEYYGS------------------------YLKGTKLWIIMEYCGGGSVLDLLKS--GNILDE 110 (467)
T ss_pred --HHHHHHHHhcCcchHHhhhhh------------------------eeecccHHHHHHHhcCcchhhhhcc--CCCCcc
Confidence 12222222211 12111111 1125666899999999999987543 333 44
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHH
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (968)
..++..+.+.. +..+|.++.+|+|+|+.||++..+ |.++|.|||.+.+++.....
T Consensus 111 ~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 111 FEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred ceeeeehHHHHHHhhhhhhcceecccccccceeEecc--CcEEEEecceeeeeechhhc
Confidence 44444333333 788999999999999999999976 89999999999999876554
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.4e-11 Score=134.11 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|.. .+|+.||||+......... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------------------------------hhHHHHHHHH
Confidence 4689999999999997 4799999998754221100 0112234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.+ ...+.+...+. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 52 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHhcCC-----------------CCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 55554422 11122222332 345789999999999876543211 2345555544444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDY--GHIRISDLGLAVEIP 153 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCC--CCEEEeeCCCceecC
Confidence 678899999999999999999865 889999999987664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-11 Score=132.44 Aligned_cols=139 Identities=19% Similarity=0.192 Sum_probs=92.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|+||+|...++..||+|+.+++-.. +-++.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 479999999999999877788999987653210 001334544
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ...+.+...+.....+++|||++|.+|.+...... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05069 54 IMKKLRH-----------------DKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMA 116 (260)
T ss_pred HHHhCCC-----------------CCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444322 11122223333556789999999999877643211 1133444444333333 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|+||+||+++++ +.++|+|||.+..+.
T Consensus 117 ~lH~~~i~H~dl~~~Nill~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05069 117 YIERMNYIHRDLRAANILVGDN--LVCKIADFGLARLIE 153 (260)
T ss_pred HHHhCCEeecccCcceEEEcCC--CeEEECCCccceEcc
Confidence 8899999999999999999865 889999999987664
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=8e-12 Score=141.92 Aligned_cols=144 Identities=22% Similarity=0.214 Sum_probs=98.3
Q ss_pred cccc-ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 120 DFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 120 ~~d~-~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.|+. .-||.|+||.||+|.+.+|+.||||...+..... +.+|
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~eF 118 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------EREF 118 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhHH
Confidence 4553 6799999999999999999999999655432210 1236
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cC-CCeEEecccCCCCCCCHHHHHhc-CCCHH---HHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS-ETVLILEFMDGIRLNDCESLEAF-GVNKQ---KVVE 272 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~-~~vLVmE~i~G~~L~~~~~~~~~-~~~~~---~l~~ 272 (968)
.+|...+.+++|. .-|.+--... .+ .++||.||++.++|.+....... .++.. +|+.
T Consensus 119 ~~Ei~~ls~l~H~-----------------Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~ 181 (361)
T KOG1187|consen 119 LNEVEILSRLRHP-----------------NLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIAL 181 (361)
T ss_pred HHHHHHHhcCCCc-----------------CcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHH
Confidence 6777777776531 0111111111 24 48999999999999876432222 33433 4444
Q ss_pred HHHHHHHHHHHhcC---ccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 273 EITRAYAHQIYVDG---FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 273 ~l~~~~l~~i~~~G---~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++. +..+|... ++|||+||.|||+|.+ .+.+|.|||+++..+.
T Consensus 182 g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 182 GAARG-LAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHHHH-HHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence 44444 77788744 9999999999999965 9999999999976654
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.2e-11 Score=132.21 Aligned_cols=140 Identities=19% Similarity=0.202 Sum_probs=95.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|+||+|...++..||+|..+++.... -+|.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP--------------------------------------ESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 4699999999999998888999999887642210 01344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ...+.+.........+++|||++|.+|.+...... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05070 54 IMKKLRH-----------------DKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 116 (260)
T ss_pred HHHhcCC-----------------CceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444422 11123333333566799999999998877643211 1244444444444433 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+|..|++|+|++|.||+++++ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~di~p~Nili~~~--~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 117 YIERMNYIHRDLRSANILVGDG--LVCKIADFGLARLIED 154 (260)
T ss_pred HHHHCCcccCCCccceEEEeCC--ceEEeCCceeeeeccC
Confidence 8899999999999999999865 8899999999987643
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-11 Score=139.27 Aligned_cols=40 Identities=18% Similarity=0.320 Sum_probs=35.4
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 227 l~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 227 MSFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIRN 266 (375)
T ss_pred HHHHHHCCeeccCCchhhEEEECC--CcEEEecCccceeccC
Confidence 678899999999999999999865 7899999999887643
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.4e-11 Score=143.91 Aligned_cols=141 Identities=21% Similarity=0.334 Sum_probs=95.5
Q ss_pred ccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 122 d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
..+.||.|++|.||+|+. .++.+++|+..+.....- ++. + . ...-.+.+|
T Consensus 337 ~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~--~~~----------------------~----~-~~~~~~~~E 386 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHP--ELD----------------------E----R-LRTERTRAE 386 (535)
T ss_pred ccceeccCCcEEEEEEee-cCccceeEEEecccccch--hHH----------------------H----H-HHHHHHHHH
Confidence 457899999999999987 455677776443211100 000 0 0 011135567
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l 279 (968)
++.+.++++ ..+.+|.++. ....+|||||++|.+|.+... ....++..+.+. +
T Consensus 387 ~~~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L 441 (535)
T PRK09605 387 ARLLSEARR------------------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-V 441 (535)
T ss_pred HHHHHhhcc------------------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-H
Confidence 777777653 2455666664 457899999999999877642 123455555543 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.++|..|++|+|+||+|||++ + ++++|+|||+++..+.
T Consensus 442 ~~lH~~giiHrDlkp~NILl~-~--~~~~liDFGla~~~~~ 479 (535)
T PRK09605 442 AKLHKAGIVHGDLTTSNFIVR-D--DRLYLIDFGLGKYSDL 479 (535)
T ss_pred HHHHhCCCccCCCChHHEEEE-C--CcEEEEeCcccccCCc
Confidence 789999999999999999994 3 7899999999987654
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-11 Score=133.53 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=95.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+..+.....- ..+..+.+|.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR----------------------------------KGESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh----------------------------------hHHHHHHHHH
Confidence 5699999999999997 5799999998754321100 0011133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++++. ..+.+...+. ....+++|||++|.+|.+..... ...++...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 52 QILEKVNSQ-----------------FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHcCCc-----------------CceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 555554321 1223333333 44568999999999887654322 12355555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLDDY--GHIRISDLGLAVKIP 153 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEECCC--CCEEEecCCcceecC
Confidence 678899999999999999999865 789999999887654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.5e-11 Score=132.21 Aligned_cols=140 Identities=17% Similarity=0.149 Sum_probs=89.6
Q ss_pred ccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
||+|++|+||+++.+ +|+.||+|+........ . ..+-.+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~-------------------------------~~~~~~~~E~~i 46 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---K-------------------------------SGEKMALLEKEI 46 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---c-------------------------------hhhHHHHHHHHH
Confidence 689999999999974 79999999764311000 0 000011224444
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--H
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l 279 (968)
+.++.+ +. +.+-..+. ....++||||++|.+|.+..... ..+.+...+...+.+++ +
T Consensus 47 l~~l~h------------------p~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al 108 (277)
T cd05607 47 LEKVNS------------------PFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGI 108 (277)
T ss_pred HHhcCC------------------CcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 443321 11 22222222 45578999999999987654221 12344444444333333 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 109 ~~lH~~~ivH~dikp~Nili~~~--~~~~l~Dfg~~~~~~ 146 (277)
T cd05607 109 LHLHSMDIVYRDMKPENVLLDDQ--GNCRLSDLGLAVELK 146 (277)
T ss_pred HHHHHCCEEEccCChHhEEEcCC--CCEEEeeceeeeecC
Confidence 78899999999999999999865 889999999987664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-11 Score=132.80 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=95.6
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|...+++.||||..+++-.. +-++.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 689999999999999878889999987653210 001334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l 279 (968)
.+.++.+. .-+.+-..+. ....+++|||++|.+|.+...... ...+...+...+.+++ +
T Consensus 54 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l 116 (261)
T cd05068 54 IMKKLRHP-----------------KLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116 (261)
T ss_pred HHHHCCCC-----------------CccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 55544320 0112222222 455689999999999987643211 1244555555544444 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~ 154 (261)
T cd05068 117 AYLEAQNYIHRDLAARNVLVGEN--NICKVADFGLARVIK 154 (261)
T ss_pred HHHHhCCeeeccCCcceEEEcCC--CCEEECCcceEEEcc
Confidence 78899999999999999999965 889999999988775
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-11 Score=137.22 Aligned_cols=141 Identities=21% Similarity=0.216 Sum_probs=91.1
Q ss_pred ccccccceeEEEEEEe----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||.|++|.||+++. .+|+.||||+.+...... . ....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~---------------------------------~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--R---------------------------------DRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--h---------------------------------hHHHHH
Confidence 4689999999999975 368999999876321100 0 000123
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|.+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 47 ~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~ 108 (318)
T cd05582 47 MERDILAEVNH-----------------PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELA 108 (318)
T ss_pred HHHHHHHhCCC-----------------CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 45544444422 00111212222 455689999999988866532 122345444444444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 109 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 109 LALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESI 149 (318)
T ss_pred HHHHHHHHCCEecCCCCHHHeEECCC--CcEEEeeccCCcccC
Confidence 778999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.24 E-value=5e-11 Score=133.71 Aligned_cols=160 Identities=18% Similarity=0.151 Sum_probs=103.3
Q ss_pred HHHhhhCCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcc
Q 002092 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (968)
Q Consensus 105 ~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~ 183 (968)
+...-++.++++.|... +.||+|++|+||+|+. .+|+.||||+.+..-...
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~-------------------------- 65 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-------------------------- 65 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc--------------------------
Confidence 34445677888887643 4699999999999997 478999999875321100
Q ss_pred hHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh
Q 002092 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA 262 (968)
Q Consensus 184 ~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~ 262 (968)
.+. ..++..|++.+.++.+ ...+.+...+. ....+|||||+.| ++.+......
T Consensus 66 --~~~------~~~~~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~ 119 (317)
T cd06635 66 --NEK------WQDIIKEVKFLQRIKH-----------------PNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHK 119 (317)
T ss_pred --hHH------HHHHHHHHHHHHhCCC-----------------CCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhc
Confidence 000 0123345555444422 11223333332 4567899999987 5555433333
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.....
T Consensus 120 ~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 120 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASIASP 177 (317)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC--CCEEEecCCCccccCC
Confidence 3455555554444433 678899999999999999999865 8899999998876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.2e-11 Score=132.68 Aligned_cols=140 Identities=21% Similarity=0.243 Sum_probs=92.4
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... . .+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~---------------------------~----------~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL---------------------------R----------DF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH---------------------------H----------HH
Confidence 5799999999999985 3689999998664322110 0 12
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
.+|.+.+.++.+ +. +.+..+.. ....++||||++|.+|.+.........+...+...+
T Consensus 53 ~~e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~ 114 (284)
T cd05081 53 EREIEILKSLQH------------------DNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYA 114 (284)
T ss_pred HHHHHHHHhCCC------------------CCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHH
Confidence 344444444321 11 12222211 234579999999999987643222234444444444
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 115 ~~l~~aL~~LH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 115 SQICKGMEYLGSKRYVHRDLATRNILVESE--NRVKIGDFGLTKVLPQ 160 (284)
T ss_pred HHHHHHHHHHHHCCceeccCCHhhEEECCC--CeEEECCCcccccccC
Confidence 4433 678899999999999999999865 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=9e-12 Score=134.70 Aligned_cols=141 Identities=21% Similarity=0.267 Sum_probs=94.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.+|+|.+|.|-+|.. +.|+.||||.++.+--+. ..|+- ..++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlv---------------------------------hIRREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLV---------------------------------HIRREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHH---------------------------------HHHHHH
Confidence 5799999999999986 789999999766431100 11111 123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCH---HHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~---~~l~~~l~~~~ 278 (968)
+.+..+.+ ..-+.|-+|+. ..+-||||||..|+.|.|....+ ..+.. ..+.++++.+
T Consensus 105 eIMSsLNH-----------------PhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSA- 165 (668)
T KOG0611|consen 105 EIMSSLNH-----------------PHIIQIYEVFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSA- 165 (668)
T ss_pred HHHhhcCC-----------------CceeehhhhhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHH-
Confidence 44443321 11244556665 67779999999999999986432 22222 2233333332
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+.|.++++|||+|-+|||++.+ +.++|.|||++-.+.
T Consensus 166 VhYCHknrVvHRDLKLENILLD~N--~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 166 VHYCHKNRVVHRDLKLENILLDQN--NNIKIADFGLSNLYA 204 (668)
T ss_pred HHHHhhccceecccchhheeecCC--CCeeeeccchhhhhc
Confidence 456789999999999999999966 889999999987654
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.1e-11 Score=143.39 Aligned_cols=139 Identities=18% Similarity=0.126 Sum_probs=92.7
Q ss_pred cccccccceeEEEEEEeC-C-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 123 ETPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~-G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
.+.+|.|++|.||+|... + ++.||+|......... ...+++
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~-------------------------------------~~~~~~ 114 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ-------------------------------------AAYARS 114 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH-------------------------------------HHHHHH
Confidence 357999999999999863 4 6889999643221100 001234
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHH--H-hcCCCHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL--E-AFGVNKQKVVEE 273 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~--~-~~~~~~~~l~~~ 273 (968)
|+..+..+.+ ..|++++. ....+|||||++|++|.+.... . ...++...+...
T Consensus 115 E~~~l~~l~H--------------------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i 174 (478)
T PTZ00267 115 ELHCLAACDH--------------------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL 174 (478)
T ss_pred HHHHHHhCCC--------------------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence 5555444322 12344442 4667999999999999875421 1 122444444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 175 ~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~--~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 175 FYQIVLALDEVHSRKMMHRDLKSANIFLMPT--GIIKLGDFGFSKQYSD 221 (478)
T ss_pred HHHHHHHHHHHHhCCEEECCcCHHhEEECCC--CcEEEEeCcCceecCC
Confidence 33433 778999999999999999999865 8999999999987754
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-11 Score=130.63 Aligned_cols=139 Identities=16% Similarity=0.265 Sum_probs=104.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.||||..+.|+. -++++||||.-.-. .+... ++.|-
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-------------------------S~APQ--------------LrdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-------------------------SEAPQ--------------LRDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEecccc-------------------------CCcch--------------HHHHH
Confidence 5799999999999984 68999999963210 11111 22333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cC-CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~-~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.-+.+.. ..-||.||. |+ .++||||.+ |.+|.|+..+....++.+.++...++++
T Consensus 75 r~YKlL~g-------------------~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 75 RTYKLLGG-------------------TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred HHHHHHcC-------------------CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 33333321 346899886 44 468999999 9999999888888888888888888877
Q ss_pred --HHHHHhcCccccCCCCCceEEecCC---CCceEEEecccccccCHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i~LiDFG~~~~l~~~ 321 (968)
++.+|.+.+|-||+||.|+||...+ ...|.+|||||++++-+.
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 8889999999999999999998531 135789999999987543
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.2e-11 Score=130.55 Aligned_cols=139 Identities=21% Similarity=0.199 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|+.+++..||+|..+.+-. .+-+|.+|+.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999998888999997553211 0112444555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+. .-+.+...+. ....++||||++|.+|.+.........+...+...+.++. +.
T Consensus 52 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 114 (256)
T cd05114 52 VMMKLSHP-----------------KLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGME 114 (256)
T ss_pred HHHHCCCC-----------------CceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHH
Confidence 55544220 0122222222 4556899999999998776432222344444444443433 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|++|+||+++.+ +.++|+|||.+..+.
T Consensus 115 ~lH~~~i~H~dl~p~ni~i~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05114 115 YLERNSFIHRDLAARNCLVSST--GVVKVSDFGMTRYVL 151 (256)
T ss_pred HHHHCCccccccCcceEEEcCC--CeEEECCCCCccccC
Confidence 8899999999999999999865 889999999887653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.1e-11 Score=130.96 Aligned_cols=139 Identities=19% Similarity=0.221 Sum_probs=95.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|..++++.||||+.+...... -++.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--------------------------------------EAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH--------------------------------------HHHHHHHH
Confidence 5799999999999999899999999876432110 02334544
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ...+.+..++.....+++|||++|.+|.+...... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 116 (260)
T cd05067 54 LMKQLQH-----------------PRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMA 116 (260)
T ss_pred HHHhcCC-----------------cCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444422 01122223333556799999999999877643211 2344444444444444 68
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|+||.||+++.+ +.+.|+|||++..+.
T Consensus 117 ~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05067 117 FIERKNYIHRDLRAANILVSET--LCCKIADFGLARLIE 153 (260)
T ss_pred HHhcCCeecccccHHhEEEcCC--CCEEEccCcceeecC
Confidence 8899999999999999999865 889999999998765
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.4e-11 Score=134.10 Aligned_cols=80 Identities=21% Similarity=0.172 Sum_probs=60.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+++|||+++++|.+........++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++
T Consensus 80 ~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~--~~~kl~DfG~a~ 157 (316)
T cd05108 80 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP--QHVKITDFGLAK 157 (316)
T ss_pred CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC--CcEEEccccccc
Confidence 4567899999999998776432222344444554444444 788999999999999999999865 789999999998
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 158 ~~~~ 161 (316)
T cd05108 158 LLGA 161 (316)
T ss_pred cccC
Confidence 7653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.5e-11 Score=129.25 Aligned_cols=151 Identities=20% Similarity=0.206 Sum_probs=95.0
Q ss_pred ccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 118 FMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 118 f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
|.++..++||+|++|+||+|.. .+|+.||||..+.........+. ...+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~---------------------~~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDS---------------------RQKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccch---------------------HHHHHHH------
Confidence 4566778999999999999986 47999999976532211100000 0000111
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH-
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV- 271 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~- 271 (968)
.+..|+..+.++.+ ..+++++. ....++||||++|.+|.+..... ..++...+.
T Consensus 54 ~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~ 112 (272)
T cd06629 54 ALRSEIETLKDLDH--------------------LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRF 112 (272)
T ss_pred HHHHHHHHHHhcCC--------------------CCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHH
Confidence 12334444443321 11223332 45678999999999987764321 233333333
Q ss_pred --HHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 272 --EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 272 --~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++.. +..+|..|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 113 ~~~qi~~~-l~~lH~~~i~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~ 159 (272)
T cd06629 113 FTEQVLEG-LAYLHSKGILHRDLKADNLLVDAD--GICKISDFGISKKSD 159 (272)
T ss_pred HHHHHHHH-HHHHhhCCeeecCCChhhEEEcCC--CeEEEeecccccccc
Confidence 333332 678899999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.9e-11 Score=130.71 Aligned_cols=140 Identities=21% Similarity=0.253 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.. +|+.||+|+....-...-. ... ..+|.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-----------------------------~~~------~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-----------------------------REE------NIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-----------------------------HHH------HHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-----------------------------cch------hhhhh
Confidence 57999999999999985 6779999998754322110 000 01155
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++++. .-+.+-.++. ....+++|||++|.+|.++.. ....++...+...+.+++ +
T Consensus 50 ~~~~~l~~~-----------------~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L 111 (260)
T PF00069_consen 50 KILRRLRHP-----------------NIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEAL 111 (260)
T ss_dssp HHHHHHTBT-----------------TBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHH
T ss_pred hcccccccc-----------------cccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 555555321 1122333332 566789999999988877654 344556665555555544 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|+|+||.||+++.+ ++++|+|||++..+
T Consensus 112 ~~Lh~~~i~H~dikp~NIl~~~~--~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 112 AYLHSKGIVHRDIKPENILLDEN--GEVKLIDFGSSVKL 148 (260)
T ss_dssp HHHHHTTEEESSBSGGGEEESTT--SEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccc--cccccccccccccc
Confidence 89999999999999999999955 89999999998753
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.1e-11 Score=134.50 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=56.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~ 144 (316)
T cd05619 68 KENLFFVMEYLNGGDLMFHIQ-SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC--CCEEEccCCcce
Confidence 345679999999999876542 122344444443333333 778999999999999999999865 889999999986
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 145 ~ 145 (316)
T cd05619 145 E 145 (316)
T ss_pred E
Confidence 5
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.4e-11 Score=131.07 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|+..+...||||+.++.... +-+|.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 469999999999999877778999987642110 002344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ..-+.+...+.....++||||++|.+|.+...... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (262)
T cd05071 54 VMKKLRH-----------------EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 116 (262)
T ss_pred HHHhCCC-----------------CCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 5554422 00122222223455789999999999877643211 1234444444444433 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~Nill~~~--~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 117 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 154 (262)
T ss_pred HHHHCCccccccCcccEEEcCC--CcEEeccCCceeeccc
Confidence 7899999999999999999865 8899999999987654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.4e-11 Score=129.83 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=58.8
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+... ....+....+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--~~~~l~dfg~~~ 145 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLS-QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC--CCEEEccCCcce
Confidence 355689999999999876533 222345555444444443 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 146 ~~~ 148 (279)
T cd05633 146 DFS 148 (279)
T ss_pred ecc
Confidence 554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-11 Score=130.86 Aligned_cols=140 Identities=14% Similarity=0.108 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|+||+||+|+++ .+..||+|+.+.+..... +.+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~------------------------------------~~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQ------------------------------------RRGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHH------------------------------------HHHHH
Confidence 57999999999999863 467899998765422110 01233
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|...+.++.+ ..-+.+-..+. ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 55 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~ 117 (266)
T cd05064 55 AEALTLGQFDH-----------------SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLA 117 (266)
T ss_pred HHHHHHhcCCC-----------------CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 44444433321 11122222222 4567899999999999876543222345555544444443
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|+|+||.||+++.+ +.+++.|||.....
T Consensus 118 ~al~~lH~~~iiH~dikp~nili~~~--~~~~l~dfg~~~~~ 157 (266)
T cd05064 118 SGMKYLSEMGYVHKGLAAHKVLVNSD--LVCKISGFRRLQED 157 (266)
T ss_pred HHHHHHHHCCEeeccccHhhEEEcCC--CcEEECCCcccccc
Confidence 678999999999999999999865 88999999976553
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.1e-11 Score=131.08 Aligned_cols=144 Identities=18% Similarity=0.222 Sum_probs=91.3
Q ss_pred cccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 119 ~~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
.+|. -+-||.|.+|.||.++++ ++...|+||.....- ... +++.+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l---~~r----kKl~R-------------------------- 123 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL---ASR----KKLKR-------------------------- 123 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHH---hhh----hHHHH--------------------------
Confidence 3444 267999999999999986 468899999743211 000 00000
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCC--CeEEecccCCCCCCCHHHHHhcC-CCHH--H
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE--TVLILEFMDGIRLNDCESLEAFG-VNKQ--K 269 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~--~vLVmE~i~G~~L~~~~~~~~~~-~~~~--~ 269 (968)
...|...+..+ .+..+|..|. .++ .+||||||+|+.|..+.+-.... +... +
T Consensus 124 -a~tE~eIL~~l--------------------DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aR 182 (459)
T KOG0610|consen 124 -AQTEREILSLL--------------------DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAAR 182 (459)
T ss_pred -HHHHHHHHHhc--------------------CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHH
Confidence 11122233322 2346788875 333 47999999999887653321111 1111 1
Q ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 270 l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+...-+-+.++++|-.|||.|||||+||||+++ |.|.|.||-++.+.
T Consensus 183 FYaAEvl~ALEYLHmlGivYRDLKPENILvred--GHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 183 FYAAEVLLALEYLHMLGIVYRDLKPENILVRED--GHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHHHHHHHhhceeeccCCcceeEEecC--CcEEeeeccccccC
Confidence 111111123888999999999999999999976 99999999998765
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.9e-11 Score=140.17 Aligned_cols=133 Identities=17% Similarity=0.179 Sum_probs=93.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCCh------hhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
+-||.||-|-|..|++ .+|+.+||||+.... ...|..
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~Ier------------------------------------ 61 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIER------------------------------------ 61 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhh------------------------------------
Confidence 5799999999999997 699999999975321 111122
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
|.-.++-+.+ ...+..-.|+. ..+.+||.||++|+.|-+... +..++..++.+.-+.
T Consensus 62 ----EIviMkLi~H-----------------pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~ 119 (786)
T KOG0588|consen 62 ----EIVIMKLIEH-----------------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFR 119 (786)
T ss_pred ----hhHHHHHhcC-----------------CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHH
Confidence 2222222221 12233444444 566799999999999988753 444555555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
+++ +..+|..+|+|||+||+|+|++.. ++|+|.||||+.
T Consensus 120 QIi~gv~yCH~~~icHRDLKpENlLLd~~--~nIKIADFGMAs 160 (786)
T KOG0588|consen 120 QILDGVSYCHAFNICHRDLKPENLLLDVK--NNIKIADFGMAS 160 (786)
T ss_pred HHHHHHHHHhhhcceeccCCchhhhhhcc--cCEeeeccceee
Confidence 544 667789999999999999999976 669999999986
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.6e-11 Score=130.92 Aligned_cols=141 Identities=21% Similarity=0.230 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|++|.||+|+. .+++.||||..++........ ++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA------------------------------------DL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH------------------------------------HH
Confidence 3599999999999984 368899999877543211100 13
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|...+.++.+ ..-+.+..... . ...+|||||++|.+|.++........+...+...+.
T Consensus 54 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~ 116 (284)
T cd05079 54 KKEIEILRNLYH-----------------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAV 116 (284)
T ss_pred HHHHHHHHhCCC-----------------CCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHH
Confidence 344444444321 11122222222 1 345799999999999876432222344444444444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~i~~aL~~lH~~gi~H~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05079 117 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 160 (284)
T ss_pred HHHHHHHHHHHCCeeecccchheEEEcCC--CCEEECCCccccccc
Confidence 433 788999999999999999999865 889999999988664
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.3e-11 Score=134.03 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=92.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||+|+.+........ ..+.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------------HHHHHHH
Confidence 57999999999999975 7899999987654321110 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+...+. ....+|||||++|.+|.++... ....+...+.....+++ +
T Consensus 55 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l 116 (333)
T cd06650 55 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGL 116 (333)
T ss_pred HHHHHCCC-----------------CcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 55554432 01122222333 4567899999999999876432 12234433333333332 5
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|. +|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 117 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 155 (333)
T ss_pred HHHHhcCCEEecCCChhhEEEcCC--CCEEEeeCCcchhhh
Confidence 66775 589999999999999865 889999999986553
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.9e-11 Score=129.98 Aligned_cols=136 Identities=19% Similarity=0.228 Sum_probs=92.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|+.+++..+|||+.+++... +-+|..|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999888889999986543210 001223433
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ + .|++.+. ....++||||++|.+|.+.........+...+...+.+++
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 52 VMMKLSH------------------P--NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 3333321 1 1333332 4567899999999998876432222344444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||+++...
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~dfg~~~~~~ 151 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVGED--NVVKVSDFGLARYVL 151 (256)
T ss_pred HHHHHHHCCcccccccHhhEEECCC--CcEEECCcccceecc
Confidence 678899999999999999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.6e-11 Score=135.55 Aligned_cols=73 Identities=22% Similarity=0.418 Sum_probs=52.7
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++||||++|. +.+.. ....+...+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++..
T Consensus 96 ~~~lv~e~~~~~-l~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~--~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDAN-LCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhccc-HHHHH---hhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCC--CCEEEeeCcccccC
Confidence 358999999873 32221 12344444444343433 778999999999999999999865 89999999998765
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
.
T Consensus 170 ~ 170 (355)
T cd07874 170 G 170 (355)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.1e-11 Score=128.58 Aligned_cols=141 Identities=19% Similarity=0.216 Sum_probs=94.9
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||.|++|.||+|+.+ +...||||+.++....... .+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~~ 53 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR------------------------------------LDFL 53 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHH------------------------------------HHHH
Confidence 68999999999999974 2457999987754321111 1233
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.|...+.++.+ ..-+.+...+. ....+++|||++|.+|.+........++...+...+.+++
T Consensus 54 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 116 (266)
T cd05033 54 TEASIMGQFDH-----------------PNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIA 116 (266)
T ss_pred HHHHHHHhCCC-----------------CCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 34444444321 01122222222 4556899999999999877543223455555555554444
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~l~~Lh~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd05033 117 SGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRRLE 157 (266)
T ss_pred HHHHHHHhCCcccCCCCcceEEEcCC--CCEEECccchhhccc
Confidence 678899999999999999999865 889999999998774
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.1e-11 Score=132.95 Aligned_cols=142 Identities=20% Similarity=0.202 Sum_probs=90.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+....... ... .+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------~~~------~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-----------------------------VKE------TTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-----------------------------chh------hHHHHH
Confidence 57899999999999985 789999998764311000 000 112233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+..++. ....++||||++|..+..+.. ...+.....+...+.+++ +
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 52 KMLRTLKQ-----------------ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred HHHHhCCC-----------------ccccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 33333321 00111122222 445689999999876654321 122355555444444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHN--DVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccCcccccc
Confidence 78899999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.3e-11 Score=129.76 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||.|+.+++..||||..+.+... +-+|.+|..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 469999999999999877778999976543110 001334444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ ..|++++. ....+++|||++|.+|.+.............+...+.++.
T Consensus 52 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 52 VMMKLSH--------------------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHhcCCC--------------------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 4444321 12333432 3456899999999988876432222345555555544444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVDDQ--GCVKVSDFGLSRYVL 151 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEcCC--CCEEECCCccceecC
Confidence 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.7e-11 Score=130.96 Aligned_cols=141 Identities=19% Similarity=0.258 Sum_probs=98.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||.|.-++||+|+. ..++.||||+..- + ....|+. .+++|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL--E-kc~~~ld---------------------------------~l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL--E-KCNNDLD---------------------------------ALRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh--h-hhhhhHH---------------------------------HHHHHH
Confidence 3589998899999985 5789999997631 1 1111111 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCce-Eeeeeee-cCCCeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~- 278 (968)
.++..+.+ ++| ..-..+- ....++||-|+.|+++.++... -..|++...++..+-+.+
T Consensus 76 ~~msl~~H------------------PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 76 QTMSLIDH------------------PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred HHhhhcCC------------------CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 55554432 221 1111111 5667899999999999887542 234666666666666655
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.++|..|.||||+|+|||||+.+ |.|+|.|||....+-+
T Consensus 138 aL~YLH~~G~IHRdvKAgnILi~~d--G~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 138 ALDYLHQNGHIHRDVKAGNILIDSD--GTVKLADFGVSASLFD 178 (516)
T ss_pred HHHHHHhcCceecccccccEEEcCC--CcEEEcCceeeeeecc
Confidence 888999999999999999999976 9999999998776644
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.1e-11 Score=146.90 Aligned_cols=142 Identities=18% Similarity=0.247 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.. +|+.||||+.+..... + ..... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~------------------------~~~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----N------------------------KNMVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----C------------------------HHHHH------HHHHHH
Confidence 67999999999999975 7999999997632100 0 00000 122233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+++ ...+.+-..+. ....+|||||++|.+|.++.... ..+....+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------p~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL 117 (669)
T cd05610 56 DALALSKS-----------------PFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALAL 117 (669)
T ss_pred HHHHhcCC-----------------CCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 33333221 00111112222 45678999999999988764321 2234333333333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..||+|+||||.|||++.+ +.++|+|||+++...
T Consensus 118 ~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFGls~~~~ 155 (669)
T cd05610 118 DYLHRHGIIHRDLKPDNMLISNE--GHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHhCCEEeCCccHHHEEEcCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999988654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.8e-11 Score=129.00 Aligned_cols=136 Identities=19% Similarity=0.232 Sum_probs=92.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|+||+|...+++.+|||+.+.+... +-+|..|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999877889999987643210 012334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ + .+.+++. ....++||||++|.+|.+.............+...+.+++
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 52 VMMKLSH------------------P--KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5444321 1 1222322 4567899999999998776432222244444444433333
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~ 151 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVGEN--QVVKVSDFGMTRFVL 151 (256)
T ss_pred HHHHHHHCCccccccccceEEEcCC--CeEEECCCcceeecc
Confidence 677899999999999999999855 789999999987653
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.7e-11 Score=129.31 Aligned_cols=148 Identities=14% Similarity=0.143 Sum_probs=98.2
Q ss_pred ccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
++++|..+. .||+|++|.||+|+. .+|+.||||+.........
T Consensus 2 ~~~~~~~~~--~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~---------------------------------- 45 (277)
T cd06641 2 PEELFTKLE--KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE---------------------------------- 45 (277)
T ss_pred HHHhhhhhe--eEeecCCeEEEEEEECCCCcEEEEEEeccccchHH----------------------------------
Confidence 345555444 599999999999986 4789999997642211000
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
.-++.+|...+.++.+ ..-+.+...+. ....++||||++|.+|.+.. .....+...+.
T Consensus 46 --~~~~~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i--~~~~~~~~~~~ 104 (277)
T cd06641 46 --IEDIQQEITVLSQCDS-----------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIA 104 (277)
T ss_pred --HHHHHHHHHHHHhcCC-----------------CCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHH--hcCCCCHHHHH
Confidence 0123344444444321 11122222232 46679999999999887653 33345555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHccCCeecCCCCHHhEEECCC--CCEEEeecccceeccc
Confidence 5554444 677899999999999999999865 8899999999887654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.8e-11 Score=130.78 Aligned_cols=146 Identities=16% Similarity=0.159 Sum_probs=95.0
Q ss_pred cccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhh
Q 002092 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (968)
Q Consensus 115 ~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (968)
.+.|+-. +.||.|++|.||+|+.. +|+.|++|+......+..
T Consensus 11 ~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------- 53 (292)
T cd06644 11 NEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----------------------------------- 53 (292)
T ss_pred chhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-----------------------------------
Confidence 3444433 35999999999999974 689999998754321110
Q ss_pred hccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHH
Q 002092 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (968)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (968)
-++.+|...+..+.+ ..-+.+-..+. .+..++||||++|.++..........++...+..
T Consensus 54 --~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~ 114 (292)
T cd06644 54 --EDYMVEIEILATCNH-----------------PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 114 (292)
T ss_pred --HHHHHHHHHHHhCCC-----------------CcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHH
Confidence 012334444444321 01122222222 5677999999999988665322233445555444
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 115 ~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 160 (292)
T cd06644 115 ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD--GDIKLADFGVSAKN 160 (292)
T ss_pred HHHHHHHHHHHHhcCCeeecCCCcceEEEcCC--CCEEEccCccceec
Confidence 444433 678899999999999999999855 89999999987654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.5e-11 Score=126.63 Aligned_cols=138 Identities=17% Similarity=0.194 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|...+|+.||+|+.+...... .. ..+.+|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~------------------------------~~------~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPD------------------------------LK------RKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHH------------------------------HH------HHHHHHHH
Confidence 3689999999999998779999999765432210 00 01334444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++. ++. +++++ . ....++||||++|.+|.+.........+...+...+.++.
T Consensus 45 ~l~~l~------------------~~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 104 (251)
T cd05041 45 ILKQYD------------------HPN--IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAA 104 (251)
T ss_pred HHHhCC------------------CCC--eEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 444332 111 22222 2 5667999999999998776432222345555555444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 105 ~l~~lH~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~ 144 (251)
T cd05041 105 GMEYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSREEE 144 (251)
T ss_pred HHHHHHhCCEehhhcCcceEEEcCC--CcEEEeecccccccc
Confidence 678899999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.6e-11 Score=128.97 Aligned_cols=80 Identities=19% Similarity=0.150 Sum_probs=60.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+++|||+++++|.+........+....+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||+++
T Consensus 80 ~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~--~~~kL~dfG~~~ 157 (279)
T cd05109 80 TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP--NHVKITDFGLAR 157 (279)
T ss_pred CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC--CcEEECCCCcee
Confidence 4556899999999998776432222345555555555544 778899999999999999999865 789999999988
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 158 ~~~~ 161 (279)
T cd05109 158 LLDI 161 (279)
T ss_pred eccc
Confidence 7653
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.9e-11 Score=126.63 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEEeC-C---CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~---G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||.|++|.||+|+.. + +..|+||+.+....... . -++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~---~---------------------------------~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEE---R---------------------------------KDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhH---H---------------------------------HHHH
Confidence 36899999999999975 3 88999998876533210 0 0123
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHH--------hcCCCH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--------AFGVNK 267 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~--------~~~~~~ 267 (968)
.|.+.+.++.+ ..+++++ . ....+++|||++|.+|.+..... ....+.
T Consensus 45 ~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 104 (262)
T cd00192 45 KEARVMKKLGH--------------------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSL 104 (262)
T ss_pred HHHHHHhhcCC--------------------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCH
Confidence 34444444321 1122222 1 45568999999999998875432 134555
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED--LVVKISDFGLSRDVYDD 158 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC--CcEEEcccccccccccc
Confidence 55555555544 788999999999999999999965 89999999999877643
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.4e-11 Score=128.96 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... . .+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----S---------------------------------LIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----H---------------------------------HHHHHH
Confidence 5789999999999997 5889999998864321110 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||++|.+|.+.... ....+...+.....++. +
T Consensus 58 ~~l~~~~h-----------------~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l 119 (267)
T cd06646 58 FMVKECKH-----------------CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGL 119 (267)
T ss_pred HHHHhcCC-----------------CCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 4556899999999998876431 22344444444333333 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 120 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06646 120 AYLHSKGKMHRDIKGANILLTDN--GDVKLADFGVAAKIT 157 (267)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEECcCccceeec
Confidence 78899999999999999999865 889999999988764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.3e-11 Score=134.41 Aligned_cols=137 Identities=19% Similarity=0.251 Sum_probs=86.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.......... ...+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-----------------------------------AKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH-----------------------------------HHHHHHHH
Confidence 6899999999999997 47999999987533211000 00122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
..+..+.+ ..-+.+..++. ....++||||++|... +. + ...++...+...+.
T Consensus 72 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~-~~--~-~~~~~~~~~~~~~~ 130 (359)
T cd07876 72 VLLKCVNH-----------------KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLC-QV--I-HMELDHERMSYLLY 130 (359)
T ss_pred HHHHhCCC-----------------CCEeeeeeeeccCCCccccceeEEEEeCCCcCHH-HH--H-hccCCHHHHHHHHH
Confidence 33333321 11122223221 1235899999987422 21 1 22344444444444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+++ +..+|..|++|||+||.||+++.+ +.++|+|||+++..
T Consensus 131 qi~~~L~~LH~~~ivHrDlkp~NIl~~~~--~~~kl~Dfg~a~~~ 173 (359)
T cd07876 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 173 (359)
T ss_pred HHHHHHHHHHhCCcccCCCCHHHEEECCC--CCEEEecCCCcccc
Confidence 443 778999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-11 Score=131.69 Aligned_cols=144 Identities=15% Similarity=0.188 Sum_probs=92.9
Q ss_pred cccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhh
Q 002092 115 GGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (968)
Q Consensus 115 ~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (968)
.+.|..+ +.||+|++|.||+|.. .+|+.||||+.+.........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------------------------------- 47 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE--------------------------------- 47 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH---------------------------------
Confidence 3444433 4699999999999987 468899999875332111000
Q ss_pred hccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHH
Q 002092 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (968)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (968)
++.+|++.+.++.+ -.|++++ . ....++||||++|.+|.+.. .........
T Consensus 48 ---~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~ 102 (277)
T cd06642 48 ---DIQQEITVLSQCDS--------------------PYITRYYGSYLKGTKLWIIMEYLGGGSALDLL--KPGPLEETY 102 (277)
T ss_pred ---HHHHHHHHHHcCCC--------------------CccHhhhcccccCCceEEEEEccCCCcHHHHh--hcCCCCHHH
Confidence 12233333333211 0111111 1 45568999999999887653 233344444
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 103 ~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 103 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC--CCEEEccccccccccC
Confidence 433333333 667899999999999999999865 8899999999887754
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-11 Score=134.89 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=88.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||||+.+...... .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 5799999999999997 479999999765321100 0001234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
+.+.++++ ..-+.+..++. ....++||||++| +|.+... ....+....+...+.+
T Consensus 51 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~q 111 (338)
T cd07859 51 KLLRLLRH-----------------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLYQ 111 (338)
T ss_pred HHHHhCCC-----------------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHHH
Confidence 55555432 01122222221 1235899999965 5544422 1223444444444434
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
++ +..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kL~Dfg~~~~~ 153 (338)
T cd07859 112 LLRALKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEccCcccccc
Confidence 33 778899999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.3e-11 Score=131.54 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=88.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|+.|++|.||+|+.+ +++.||||...+..... ... . -++.+|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~---------------------------~------~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQ---------------------------I------QQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHH---------------------------H------HHHHHHH
Confidence 57999999999999974 78999999765431100 000 0 0122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+++ ..|++++. ....+|||||++|.+|.++.... ..+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~ 111 (305)
T cd05609 53 DILTFAEN--------------------PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETV 111 (305)
T ss_pred HHHHhCCC--------------------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 33333211 12334443 33458999999999988774322 2233333333333332
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+..+|..|++|+|+||+||+++.+ +.++|+|||+++.
T Consensus 112 ~~l~~lH~~~i~H~dl~p~NIll~~~--~~~~l~dfg~~~~ 150 (305)
T cd05609 112 LALEYLHNYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKI 150 (305)
T ss_pred HHHHHHHHCCccccCCchHHEEECCC--CCEEEeeCCCccc
Confidence 688999999999999999999865 8999999998763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.6e-11 Score=132.93 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=57.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||+++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~ 144 (318)
T cd05570 68 KDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE--GHIKIADFGMCK 144 (318)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC--CcEEecccCCCe
Confidence 345689999999998865532 222355555444444433 678899999999999999999865 899999999876
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 145 ~ 145 (318)
T cd05570 145 E 145 (318)
T ss_pred e
Confidence 4
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.5e-11 Score=131.93 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=55.4
Q ss_pred CCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
+..+|||||++| +|.+..... ..+.+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~--~~~kl~Dfg~~~ 158 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLAR 158 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC--CCEEEccccceE
Confidence 346899999986 554443211 12344444444444443 778999999999999999999865 899999999987
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 159 ~~~ 161 (290)
T cd07862 159 IYS 161 (290)
T ss_pred ecc
Confidence 654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.8e-11 Score=127.91 Aligned_cols=143 Identities=20% Similarity=0.233 Sum_probs=93.4
Q ss_pred cccccccceeEEEEEEeC-CCC---EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 123 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~---~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.+.||.|++|+||+|+++ +|+ .||||..+++...... -++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR------------------------------------QDF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHH------------------------------------HHH
Confidence 367999999999999975 443 7999987654321100 012
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
.+|++.+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++
T Consensus 54 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 116 (268)
T cd05063 54 LSEASIMGQFSH-----------------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGI 116 (268)
T ss_pred HHHHHHHhcCCC-----------------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 344444333321 11122222222 455789999999999987643222234444444444443
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~al~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 117 AAGMKYLSDMNYVHRDLAARNILVNSN--LECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHHHHHHCCeeccccchhhEEEcCC--CcEEECCCccceeccc
Confidence 3 678899999999999999999865 8899999999877653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.9e-11 Score=128.10 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=93.8
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|..++++.||||+.+++.... -++..|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--------------------------------------EAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH--------------------------------------HHHHHHHH
Confidence 5799999999999998888999999876532110 01333444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~ 278 (968)
.+.++.+ ..+++++. ....+++|||++|.+|.+...... .......+...+.+++
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 54 IMKKLRH--------------------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHhhCCC--------------------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 4444321 12333332 356789999999999877643211 1234444444333332
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~al~~lh~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 114 EGMAYLESRNYIHRDLAARNILVGEN--LVCKIADFGLARLIED 155 (261)
T ss_pred HHHHHHHhCCcccCCcchheEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999866 8999999999887653
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.7e-11 Score=128.52 Aligned_cols=140 Identities=14% Similarity=0.132 Sum_probs=93.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +++.||||+........ ...++.+|.
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED------------------------------------EIEDIQQEI 53 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH------------------------------------HHHHHHHHH
Confidence 46999999999999974 68999999865221100 001233444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||++|.+|.+.. .....+...+...+.+++ +
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i--~~~~l~~~~~~~~~~~l~~~l 114 (277)
T cd06640 54 TVLSQCDS-----------------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGL 114 (277)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 46679999999999987763 333455555555444443 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|++|+||+++.+ ++++|+|||++..+..
T Consensus 115 ~~lh~~~ivH~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 115 DYLHSEKKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHhCCccCcCCChhhEEEcCC--CCEEEcccccceeccC
Confidence 78899999999999999999865 8899999999877654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.4e-11 Score=139.21 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=91.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.-||.||||.|+.|.++ +++..|||+++.+.-- ...|.+. ...|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il-~~d~Ve~---------------------------------~~~Ek 419 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDIL-QRDEVES---------------------------------LMCEK 419 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeecccee-ccccHHH---------------------------------HHHHH
Confidence 57899999999999986 7889999999866320 0111111 12233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.++...+ + ..+-..|. .+.-+.||||+.|+.+..+.........+.++...-+-+.
T Consensus 420 rI~~la~~-----------------H--PFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~ 480 (694)
T KOG0694|consen 420 RIFELANR-----------------H--PFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLG 480 (694)
T ss_pred HHHHHhcc-----------------C--CeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHH
Confidence 33322210 1 12223332 3445789999999987665432222222333333334444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|.+|||+||+|-.|||+|.+ |.++|+||||+++-
T Consensus 481 L~fLH~~~IIYRDlKLdNiLLD~e--Gh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 481 LQFLHENGIIYRDLKLDNLLLDTE--GHVKIADFGLCKEG 518 (694)
T ss_pred HHHHHhcCceeeecchhheEEccc--CcEEeccccccccc
Confidence 889999999999999999999976 99999999999865
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.2e-11 Score=125.89 Aligned_cols=139 Identities=19% Similarity=0.255 Sum_probs=97.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++||+|++|.||+|..+ +|+.|++|+.+....+.. -++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-------------------------------------EKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-------------------------------------HHHHHHH
Confidence 67999999999999985 799999999875433100 0122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ -.++.++. ....+++|||++|.+|.++.......++...+...+.+++
T Consensus 49 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 49 QILKKCKH--------------------PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHhCCC--------------------CCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 33333321 12233332 4567899999999999877443223456666555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|++|.||+++++ +.++|+|||.+..+...
T Consensus 109 ~~l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 109 KGLEYLHSNGIIHRDIKAANILLTSD--GEVKLIDFGLSAQLSDT 151 (253)
T ss_pred HHHHHhhcCCEecCCCCHHHEEEccC--CeEEEeecccccccccc
Confidence 788999999999999999999865 89999999999877654
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.7e-11 Score=136.05 Aligned_cols=137 Identities=18% Similarity=0.207 Sum_probs=105.6
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+-||+|-||.||.|......+||||.++++-- .+-+|.+||.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 56899999999999996666999999987621 1235678999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cC---CCeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~ 278 (968)
.+.++++. .+-+.|. |+ .-+|||||++-++|.+...- ....+...+++.-..+++
T Consensus 254 iMk~L~H~--------------------~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIa 313 (468)
T KOG0197|consen 254 IMKKLRHE--------------------KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIA 313 (468)
T ss_pred HHHhCccc--------------------CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHH
Confidence 99888752 1223333 32 25899999999999888653 234456677777777766
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..|-..++|||||-..||||+++ ..+++.|||+++.+.+
T Consensus 314 eGM~YLes~~~IHRDLAARNiLV~~~--~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 314 EGMAYLESKNYIHRDLAARNILVDED--LVVKISDFGLARLIGD 355 (468)
T ss_pred HHHHHHHhCCccchhhhhhheeeccC--ceEEEcccccccccCC
Confidence 777888999999999999999976 7899999999995544
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.7e-11 Score=129.70 Aligned_cols=143 Identities=15% Similarity=0.126 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|.. .+|+.||||...+....... . +..+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------~------~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------G------ESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH----------------------------H------HHHHHHHH
Confidence 4699999999999997 47999999976543211000 0 00122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.+ ...+.+...+. ....++||||++|.+|.+..... ..++....+...+.+++
T Consensus 52 ~il~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 52 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHhCCC-----------------CCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 44443321 11122222222 35568999999999997764321 12344444444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDH--GHIRISDLGLAVHVP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeccceeecC
Confidence 678899999999999999999865 889999999987654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.8e-11 Score=133.81 Aligned_cols=157 Identities=17% Similarity=0.247 Sum_probs=99.2
Q ss_pred HHhhhCCCccccccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcc
Q 002092 106 IEREFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (968)
Q Consensus 106 l~~elg~~~~~~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~ 183 (968)
+++|++..++++...|. .+.||.|++|.||+|+. .+|+.||||+.+.......
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------- 56 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL------------------------- 56 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-------------------------
Confidence 35566666666555554 46899999999999986 5899999998653211000
Q ss_pred hHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCC
Q 002092 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLND 256 (968)
Q Consensus 184 ~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~ 256 (968)
... .+.+|++.+.++.+. .-+.+..++. ....+|||||+ |.+|.+
T Consensus 57 ----~~~------~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~ 108 (343)
T cd07880 57 ----FAK------RAYRELRLLKHMKHE-----------------NVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGK 108 (343)
T ss_pred ----HHH------HHHHHHHHHHhcCCC-----------------CccceeeeecCCccccccceEEEEEecC-CCCHHH
Confidence 000 122344444444220 0112222221 23458999999 666665
Q ss_pred HHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 257 CESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+. .....+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 109 ~~--~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 169 (343)
T cd07880 109 LM--KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQTD 169 (343)
T ss_pred HH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccccccc
Confidence 43 223445444444444433 678899999999999999999865 889999999987654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.2e-11 Score=128.76 Aligned_cols=140 Identities=19% Similarity=0.179 Sum_probs=94.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+. .+++.||+|+.+....... -+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------------~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-------------------------------------EDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-------------------------------------HHHHHHH
Confidence 4699999999999997 4789999998764322110 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.++. +
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l 116 (280)
T cd06611 54 DILSECKH-----------------PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEAL 116 (280)
T ss_pred HHHHhCCC-----------------CceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 44444421 11122222222 4556899999999999876433223355555554444443 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||.+....
T Consensus 117 ~~lh~~~i~h~dl~p~nili~~~--~~~~l~d~g~~~~~~ 154 (280)
T cd06611 117 NFLHSHKVIHRDLKAGNILLTLD--GDVKLADFGVSAKNK 154 (280)
T ss_pred HHHHHCCcccCCCChhhEEECCC--CCEEEccCccchhhc
Confidence 78899999999999999999865 899999999876553
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.4e-11 Score=126.78 Aligned_cols=142 Identities=20% Similarity=0.181 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeC--CC--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV--DG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G--~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|... +| ..||||+.+++...... -++.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM------------------------------------DDFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHH------------------------------------HHHH
Confidence 35899999999999874 33 36999988765432000 0123
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~ 278 (968)
+|.+.+.++++. .-+.+...+.....++||||++|.+|.+...-.. ...+...+...+.++.
T Consensus 45 ~e~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 107 (257)
T cd05040 45 KEAAIMHSLDHE-----------------NLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA 107 (257)
T ss_pred HHHHHHhhcCCC-----------------CccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 344444444320 0122222222355689999999999987643221 1234444444443433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 ~~L~~lH~~~i~H~di~p~nil~~~~--~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 108 NGMRYLESKRFIHRDLAARNILLASD--DKVKIGDFGLMRALPQ 149 (257)
T ss_pred HHHHHHHhCCccccccCcccEEEecC--CEEEeccccccccccc
Confidence 678899999999999999999966 8999999999887654
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.9e-11 Score=133.36 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=34.7
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 192 l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~dfg~~~~~~ 230 (343)
T cd05103 192 MEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 230 (343)
T ss_pred HHHHHhCCeecCCCccCeEEEcCC--CcEEEEecccccccc
Confidence 677899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-10 Score=126.50 Aligned_cols=144 Identities=12% Similarity=0.112 Sum_probs=92.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|+||+|...+|+.||||+.+........ ..+.. -.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~-------------------------~~~~~------~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLA-------------------------AEKEY------EKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhh-------------------------HHHHH------HHHHHHHH
Confidence 579999999999999888999999987643211100 00000 12344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++ ..-+.+..... ....+++|||++|.+|.+.... ........+...+.++. +.
T Consensus 55 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 116 (265)
T cd06631 55 LLKSLKH-----------------VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVA 116 (265)
T ss_pred HHHhcCC-----------------CCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 5544432 01122222222 4556899999999999876432 12334444433333333 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 117 ~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 152 (265)
T cd06631 117 YLHNNCVVHRDIKGNNVMLMPN--GIIKLIDFGCARRL 152 (265)
T ss_pred HHHhCCcccCCcCHHhEEECCC--CeEEeccchhhHhh
Confidence 7899999999999999999865 89999999988765
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-10 Score=126.16 Aligned_cols=139 Identities=20% Similarity=0.229 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|...+++.||||...+.-.. . + .+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-----~-----------------------~----------~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-----V-----------------------Q----------AFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh-----H-----------------------H----------HHHHHHH
Confidence 579999999999999888899999986643110 0 0 1233444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
.+.++.+ +. +.+-..+. ....+|+|||++|.+|.+...... .......+...+.++.
T Consensus 54 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~ 115 (261)
T cd05072 54 LMKTLQH------------------DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 115 (261)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4444321 11 11111222 455689999999999887643221 2234444444333433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|.|||.+..+..
T Consensus 116 l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 116 MAYIERKNYIHRDLRAANVLVSES--LMCKIADFGLARVIED 155 (261)
T ss_pred HHHHHHCCeeccccchhhEEecCC--CcEEECCCccceecCC
Confidence 678899999999999999999865 8899999999987653
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=134.66 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=86.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. ++++.||||+... . .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~----------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---G----------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh---h----------------------------------------hhHHHH
Confidence 5699999999999997 5899999995321 0 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-..+. ....++|||++.| .|.+... ....+....+...+.+++ +
T Consensus 135 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 195 (391)
T PHA03212 135 HILRAINH-----------------PSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAI 195 (391)
T ss_pred HHHHhCCC-----------------CCCCCEeEEEEECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554432 01122222232 4556899999965 4433321 223344444444444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 196 ~ylH~~~IvHrDiKP~NIll~~~--~~vkL~DFG~a~~~ 232 (391)
T PHA03212 196 QYLHENRIIHRDIKAENIFINHP--GDVCLGDFGAACFP 232 (391)
T ss_pred HHHHhCCcccCCCChHhEEEcCC--CCEEEEeCCccccc
Confidence 78999999999999999999865 88999999998643
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-10 Score=127.50 Aligned_cols=142 Identities=18% Similarity=0.190 Sum_probs=93.5
Q ss_pred ccccccceeEEEEEEeC-C---CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~---G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|.+|.||+|+.+ + +..||||..++....... -+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR------------------------------------RDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH------------------------------------HHHH
Confidence 57899999999999863 3 337999987654321100 0233
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|...+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++.
T Consensus 54 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHhCCC-----------------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444444321 11233333333 4567899999999998877543222345555444444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~h~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 117 SGMKYLSDMGYVHRDLAARNILVNSN--LVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHHHHHHCCEeehhhchhcEEECCC--CeEEeCCCCccccccc
Confidence 678899999999999999999865 8899999999887653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.5e-11 Score=140.51 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=57.2
Q ss_pred CeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.++||||++|++|.+...... ..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~--~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN--GLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC--CCEEEEecccCe
Confidence 369999999999977643211 1234444444444444 778999999999999999999865 899999999987
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 192 ~~~ 194 (496)
T PTZ00283 192 MYA 194 (496)
T ss_pred ecc
Confidence 654
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.9e-11 Score=127.30 Aligned_cols=136 Identities=18% Similarity=0.164 Sum_probs=90.1
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|+||++.. +|+.||||+.+..... . .+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~---------------------------------~------~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA---------------------------------Q------AFLEETA 51 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchH---------------------------------H------HHHHHHH
Confidence 6799999999999974 7899999986532110 0 1233444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ..-+.+...+.....+++|||++|.+|.+....... ..+...+...+.+++ +.
T Consensus 52 ~l~~~~~-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~ 114 (254)
T cd05083 52 VMTKLHH-----------------KNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114 (254)
T ss_pred HHHhCCC-----------------CCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence 4433321 111233333334557899999999999876432211 234444433333332 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 115 ~lH~~~~~H~dl~p~nili~~~--~~~kl~Dfg~~~~~ 150 (254)
T cd05083 115 YLESKKLVHRDLAARNILVSED--GVAKVSDFGLARVG 150 (254)
T ss_pred HHHhCCeeccccCcceEEEcCC--CcEEECCCccceec
Confidence 8899999999999999999865 89999999988754
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.2e-11 Score=127.63 Aligned_cols=80 Identities=16% Similarity=0.099 Sum_probs=59.3
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCC-----CceEEEec
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLDF 312 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiDF 312 (968)
...++||||++|.+|.+........++...+...+.+++ +..+|..|++|+|+||.||+++.++. ..++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 567999999999999876543322455555544444433 67889999999999999999986521 16999999
Q ss_pred ccccccC
Q 002092 313 GLTKKLS 319 (968)
Q Consensus 313 G~~~~l~ 319 (968)
|++..+.
T Consensus 153 g~a~~~~ 159 (259)
T cd05037 153 GIPITVL 159 (259)
T ss_pred Ccccccc
Confidence 9987654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.4e-11 Score=130.33 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=89.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +++.||+|..+........ ..+.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAP------------------------------------CTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCch------------------------------------hHHHHHH
Confidence 67999999999999974 7899999987543221100 0122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-..+. ....++||||++| +|.+.........+...+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 117 (301)
T cd07873 56 SLLKDLKH-----------------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGL 117 (301)
T ss_pred HHHHhcCC-----------------CCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44444322 01122222222 4556899999986 55443221222344444444444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 118 ~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 154 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (301)
T ss_pred HHHHhCCeeCCCCCHHHEEECCC--CcEEECcCcchhcc
Confidence 78899999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-10 Score=134.34 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=34.8
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.|||++.+ +.++|+|||+++.+.
T Consensus 250 L~~LH~~~ivH~dikp~Nill~~~--~~~kL~DfGla~~~~ 288 (400)
T cd05105 250 MEFLASKNCVHRDLAARNVLLAQG--KIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHhCCeeCCCCChHhEEEeCC--CEEEEEeCCcceecc
Confidence 678899999999999999999865 789999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-10 Score=125.40 Aligned_cols=143 Identities=20% Similarity=0.207 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEeC-C----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~----G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|++|+||+|+.. + ++.||+|+.++...... .-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ------------------------------------IEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH------------------------------------HHHH
Confidence 57999999999999974 3 48899999876532110 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcC-CCHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR 276 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~ 276 (968)
..|.+.+.++.+ ..-+.+-..+. ....+++|||++|.+|.+........ .....+...+.+
T Consensus 49 ~~e~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~q 111 (258)
T smart00219 49 LREARIMRKLDH-----------------PNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQ 111 (258)
T ss_pred HHHHHHHHhcCC-----------------CchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHH
Confidence 334444444311 00111112222 45678999999999998775432222 555555554444
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
++ +..+|..|++|+|++|+||+++.+ +.++|+|||++......
T Consensus 112 l~~~l~~lh~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 112 IARGMEYLESKNFIHRDLAARNCLVGEN--LVVKISDFGLSRDLYDD 156 (258)
T ss_pred HHHHHHHHhcCCeeecccccceEEEccC--CeEEEcccCCceecccc
Confidence 43 678899999999999999999865 78999999998876543
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-10 Score=121.80 Aligned_cols=146 Identities=14% Similarity=0.172 Sum_probs=93.4
Q ss_pred cccc-ccceeEEEEEEeCCCCEEEEEEec-CChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLA-TASIAQVHRATLVDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plg-saSigqV~~A~l~~G~~VAVKV~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
..+| .|+.|.||+... +|+.+|||.-+ +++-..+..+- +.+ .....-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~----------------~~~---------~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDR----------------YLF---------TGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhc----------------ccc---------cchhhhHHHHH
Confidence 4576 889999999987 57899999753 44322111100 000 00112235567
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cC---CCeEEecccCC-CCCCCHHHHHhcCCCHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SS---ETVLILEFMDG-IRLNDCESLEAFGVNKQKVVE 272 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~---~~vLVmE~i~G-~~L~~~~~~~~~~~~~~~l~~ 272 (968)
.+.+.++.+ .++.+|+++. .. +.+|||||++| .+|.++. .....+. ....
T Consensus 91 ~~ll~~L~~------------------~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~-~~~~ 149 (239)
T PRK01723 91 FRLLAQLYE------------------AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE-EQWQ 149 (239)
T ss_pred HHHHHHHHh------------------CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH-HHHH
Confidence 777777764 2455666653 11 23599999998 5666542 2222333 3333
Q ss_pred HHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+++ .+..+|..|++|+|+||+|||++.+ ++++|||||.+..-.
T Consensus 150 ~i~~-~l~~lH~~GI~HrDlkp~NILv~~~--~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQ-LIARFHDAGVYHADLNAHNILLDPD--GKFWLIDFDRGELRT 193 (239)
T ss_pred HHHH-HHHHHHHCCCCCCCCCchhEEEcCC--CCEEEEECCCcccCC
Confidence 4433 4788999999999999999999865 789999999987765
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=126.66 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=58.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+... ....+....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~--~~~kl~dfg~~~ 145 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC--CCEEEccCcCcc
Confidence 355689999999999876542 222344455444444443 678899999999999999999865 889999999987
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 146 ~~~~ 149 (278)
T cd05606 146 DFSK 149 (278)
T ss_pred ccCc
Confidence 6543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.3e-11 Score=138.33 Aligned_cols=134 Identities=20% Similarity=0.118 Sum_probs=89.5
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
...||.|++|.||+|+.. +++.||||..... .+.+|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E 210 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHE 210 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHH
Confidence 357999999999999974 6899999942100 12345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
++.+.++.+. ..+.+-.++. ....+||||++.| .|.+........++...+...+.++.
T Consensus 211 ~~iL~~L~Hp-----------------nIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~a 272 (461)
T PHA03211 211 ARLLRRLSHP-----------------AVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSA 272 (461)
T ss_pred HHHHHHCCCC-----------------CCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 5555554320 1122222222 4567899999975 44433221122355555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 273 L~yLH~~gIvHrDLKP~NILl~~~--~~vkL~DFGla~~~~ 311 (461)
T PHA03211 273 IDYIHGEGIIHRDIKTENVLVNGP--EDICLGDFGAACFAR 311 (461)
T ss_pred HHHHHHCCEEECcCCHHHEEECCC--CCEEEcccCCceecc
Confidence 788999999999999999999865 889999999987654
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-10 Score=127.24 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+++.||||+.+....... . .+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----A---------------------------------VVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----H---------------------------------HHHHHH
Confidence 5799999999999987 4799999998765422110 0 012233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++... ....+...+...+.+++ +
T Consensus 58 ~~~~~l~h-----------------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l 119 (267)
T cd06645 58 IMMKDCKH-----------------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGL 119 (267)
T ss_pred HHHHhCCC-----------------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 33332211 01122222222 4556899999999999876432 22345555555444444 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 120 ~~lH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06645 120 YYLHSKGKMHRDIKGANILLTDN--GHVKLADFGVSAQIT 157 (267)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECcceeeeEcc
Confidence 78899999999999999999865 889999999987664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=126.69 Aligned_cols=136 Identities=16% Similarity=0.150 Sum_probs=87.7
Q ss_pred cccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 125 plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.||+|++|.||+|+.. ++..||+|..+...... .+.++.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ------------------------------------EQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH------------------------------------HHHHHHHH
Confidence 5899999999999864 34679999765432100 11234455
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhc----CCCHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEE 273 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~----~~~~~~l~~~ 273 (968)
...+.++.+ + .|.+++. ....++||||++|.+|.++...... ..+...+...
T Consensus 46 ~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05087 46 AQPYRSLQH------------------S--NLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM 105 (269)
T ss_pred HHHHHhCCC------------------C--CEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHH
Confidence 555554432 1 1223332 4557899999999999876432111 1222222222
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 106 ~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~ 150 (269)
T cd05087 106 ACEIALGLLHLHKNNFIHSDLALRNCLLTAD--LTVKIGDYGLSHNK 150 (269)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEECCccccccc
Confidence 22222 677899999999999999999865 88999999988643
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-10 Score=128.07 Aligned_cols=144 Identities=17% Similarity=0.148 Sum_probs=95.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|... +++.||||+.++..... .+ ..-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LK------------------------------QVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hh------------------------------HHHHHHHHH
Confidence 57999999999999974 78999999875321100 00 001133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.+..... ..+....+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l 114 (290)
T cd05580 53 RILQSIRH-----------------PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLAL 114 (290)
T ss_pred HHHHhCCC-----------------CCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 55554421 01122333333 45568999999999987764322 3345554444444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 115 ~~lH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 115 EYLHSLDIVYRDLKPENLLLDSD--GYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEeeCCCccccCCC
Confidence 78899999999999999999865 89999999998876543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-10 Score=136.71 Aligned_cols=124 Identities=15% Similarity=0.138 Sum_probs=82.5
Q ss_pred eEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 243 VLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.|.||||.|+.|-|+..- ...++...++++++.+.+ +..+|... ++|||||-+||||..+ |..+|+|||.+..
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~--g~~KLCDFGSatt 195 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD--GNYKLCDFGSATT 195 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC--CCEEeCccccccc
Confidence 589999999998887542 233467778888777766 67788877 9999999999999966 8999999999875
Q ss_pred cCHH-----HHHHHHHHHHHH--HhCCHHHHHHHHHHcCcccCCCcHHHHHHHHHHHh
Q 002092 318 LSSS-----MKQALAKMFFAA--AEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFF 368 (968)
Q Consensus 318 l~~~-----~r~~~~~l~~a~--~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 368 (968)
.... .+..+-+=+... ......++++.+..+++..+.|.=++-.-+..++|
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy 253 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY 253 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence 4322 222222212211 12344668888888887654444333333344444
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.2e-11 Score=134.06 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=85.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+.+ +++.||+|+...+. ...|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-------------------------------------------~~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-------------------------------------------TLIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCccc-------------------------------------------cHHHH
Confidence 57999999999999974 67899999744321 11233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-..+. ....++|||++.| .|.+........+....+...+.+++ +
T Consensus 109 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL 170 (357)
T PHA03209 109 MLLQNVNH-----------------PSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGL 170 (357)
T ss_pred HHHHhCCC-----------------CCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 33333321 00111112222 3456899999976 44443322223345555444444433 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 171 ~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~ 206 (357)
T PHA03209 171 RYLHAQRIIHRDVKTENIFINDV--DQVCIGDLGAAQF 206 (357)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEecCccccc
Confidence 88999999999999999999865 8899999999864
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=125.85 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=92.0
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|+||+|.. .+|++||||+.+........ ..+ -.++.+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~-------------------------~~~-------~~~~~~e 54 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPET-------------------------KKE-------VNALECE 54 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhh-------------------------HHH-------HHHHHHH
Confidence 36899999999999997 47999999987643211000 000 0023445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHH---HHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV---VEEITR 276 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l---~~~l~~ 276 (968)
.+.+.++.+ +. +.+...+. ....++||||++|.+|.+.... ......... +..++.
T Consensus 55 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 55 IQLLKNLQH------------------ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILE 115 (263)
T ss_pred HHHHHhCCC------------------CCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHH
Confidence 555444321 12 22222222 4566899999999998776432 122333333 333333
Q ss_pred HHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 277 AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
. +..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 116 ~-l~~lH~~~i~H~dl~p~nilv~~~--~~~~l~dfg~~~~~~ 155 (263)
T cd06625 116 G-VEYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 155 (263)
T ss_pred H-HHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecc
Confidence 2 578899999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=125.72 Aligned_cols=137 Identities=21% Similarity=0.214 Sum_probs=90.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|.. .|+.||+|..+..... -+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~---------------------------------------~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchH---------------------------------------HHHHHHHH
Confidence 5799999999999986 5889999976432110 01334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (968)
.+.++.+ ...+.+...+. ....+++|||++|.+|.+....... ..+...+...+.+++
T Consensus 52 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 114 (256)
T cd05082 52 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred HHHhCCC-----------------CCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 5444422 11122222222 3456899999999999876432211 133444444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|+||+++++ +.++|+|||++....
T Consensus 115 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 153 (256)
T cd05082 115 MEYLEANNFVHRDLAARNVLVSED--NVAKVSDFGLTKEAS 153 (256)
T ss_pred HHHHHhCCEeccccchheEEEcCC--CcEEecCCccceecc
Confidence 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=128.93 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=57.6
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh-----------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCC
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA-----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH 305 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-----------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g 305 (968)
....++||||++|.+|.+...... .......+...+.+++ +..+|..|++|+|+||+||+++.+ +
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~--~ 166 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH--Y 166 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC--C
Confidence 466789999999999987643211 0123333344344433 678899999999999999999865 7
Q ss_pred ceEEEecccccccC
Q 002092 306 RPILLDFGLTKKLS 319 (968)
Q Consensus 306 ~i~LiDFG~~~~l~ 319 (968)
.++|+|||++..+.
T Consensus 167 ~~kl~dfg~~~~~~ 180 (295)
T cd05097 167 TIKIADFGMSRNLY 180 (295)
T ss_pred cEEecccccccccc
Confidence 89999999987653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-10 Score=127.83 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=57.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCce
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP 307 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i 307 (968)
....++||||++|++|.+...-.. .......+...+.+++ +..+|..|++|+|+||.||+++.+ +.+
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~--~~~ 158 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD--FTV 158 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC--CcE
Confidence 456799999999999988753211 0112233333333332 678899999999999999999865 899
Q ss_pred EEEecccccccC
Q 002092 308 ILLDFGLTKKLS 319 (968)
Q Consensus 308 ~LiDFG~~~~l~ 319 (968)
+|+|||+++.+.
T Consensus 159 ~L~Dfg~~~~~~ 170 (288)
T cd05061 159 KIGDFGMTRDIY 170 (288)
T ss_pred EECcCCcccccc
Confidence 999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=132.43 Aligned_cols=73 Identities=21% Similarity=0.413 Sum_probs=52.7
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++||||++|. +.+.. ....+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||+++..
T Consensus 103 ~~~lv~e~~~~~-l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDAN-LCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCCC-HHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC--CcEEEEeCCCcccc
Confidence 358999999873 33221 12344444444444433 778899999999999999999865 89999999998755
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
.
T Consensus 177 ~ 177 (364)
T cd07875 177 G 177 (364)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=132.93 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=35.0
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 225 L~yLH~~giiHrDLkp~Nil~~~~--~~~kL~DfGla~~~~ 263 (374)
T cd05106 225 MDFLASKNCIHRDVAARNVLLTDG--RVAKICDFGLARDIM 263 (374)
T ss_pred HHHHHHCCEEeccCchheEEEeCC--CeEEEeeceeeeecc
Confidence 778899999999999999999865 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.1e-10 Score=125.61 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=94.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+|+.||||+.+....... .. ++.+|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------------------~~----------~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDD--------------------------VS----------DIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchh--------------------------HH----------HHHHHH
Confidence 5799999999999996 5899999998764322110 00 123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++... .++. +.+...+. .+..+|||||++|.+|.+... ...+....+...+.+++
T Consensus 51 ~~l~~l~~~---------------~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~i~~~ 113 (277)
T cd06917 51 ALLSQLRQS---------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK--AGPIAEKYISVIIREVLVA 113 (277)
T ss_pred HHHHHhccC---------------CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH--ccCCCHHHHHHHHHHHHHH
Confidence 455554320 0111 22222222 456789999999999987643 33444444444333332
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 114 l~~lh~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 114 LKYIHKVGVIHRDIKAANILVTNT--GNVKLCDFGVAALLNQ 153 (277)
T ss_pred HHHHHhCCcccCCcCHHHEEEcCC--CCEEEccCCceeecCC
Confidence 678899999999999999999965 8999999999887654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.9e-10 Score=126.51 Aligned_cols=141 Identities=13% Similarity=0.173 Sum_probs=91.2
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|++|.||+|+. .+++.|+||..+....... .-++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ------------------------------------WGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH------------------------------------HHHH
Confidence 5799999999999985 2568899997653211100 0123
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh---------------
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--------------- 262 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--------------- 262 (968)
.+|++.+.++++ ..-+.+...+. ....++||||++|.+|.++.....
T Consensus 55 ~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05090 55 QQEASLMAELHH-----------------PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTV 117 (283)
T ss_pred HHHHHHHhhCCC-----------------CCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCcccccccccccc
Confidence 345555554422 01122222222 456789999999998877643221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++.+.
T Consensus 118 ~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 175 (283)
T cd05090 118 KSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ--LHVKISDLGLSREIY 175 (283)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC--CcEEecccccccccc
Confidence 1123333333333333 788999999999999999999865 789999999988763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-10 Score=128.63 Aligned_cols=75 Identities=21% Similarity=0.321 Sum_probs=54.3
Q ss_pred CeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 242 TVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+++|||++| ++.+.... ...++....+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~kl~dfg~~~~~ 158 (288)
T cd07863 82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG--GQVKLADFGLARIY 158 (288)
T ss_pred EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECccCccccc
Confidence 5799999986 44443221 112345555555444444 778899999999999999999865 89999999998765
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
+
T Consensus 159 ~ 159 (288)
T cd07863 159 S 159 (288)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.5e-10 Score=125.57 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=93.1
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|++|+||.++. .+++.||||+.+....... +..|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN------------------------------------TSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH------------------------------------HHHH
Confidence 5699999999988653 3688999998765422110 0123
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
.+|.+.+.++.+ +. +.+...+. ....+++|||++|.+|.+.. ....++...+...+
T Consensus 54 ~~E~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~l~~~~~~~i~ 113 (283)
T cd05080 54 KKEINILKTLYH------------------ENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLLFA 113 (283)
T ss_pred HHHHHHHHhCCC------------------CCEeeEEEEEecCCCceEEEEecCCCCCCHHHHH--HHcCCCHHHHHHHH
Confidence 345544444421 11 11212111 12357999999999998764 33446666555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||.||+++.+ +.++|.|||++..+..
T Consensus 114 ~~l~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 114 QQICEGMAYLHSQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 159 (283)
T ss_pred HHHHHHHHHHHHCCeeccccChheEEEcCC--CcEEEeecccccccCC
Confidence 5544 788899999999999999999865 8899999999886653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=125.76 Aligned_cols=141 Identities=20% Similarity=0.175 Sum_probs=95.8
Q ss_pred ccccccceeEEEEEEeC-CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~----~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+.+ +|+ .||+|+........ ....+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPK------------------------------------ANKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHH------------------------------------HHHHH
Confidence 67999999999999974 454 58999765432210 00123
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.+|+..+.++.+ ..-+.+.........++||||++|.+|.+.........+...+...+.++.
T Consensus 57 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 119 (279)
T cd05057 57 LDEAYVMASVDH-----------------PHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA 119 (279)
T ss_pred HHHHHHHHhCCC-----------------CCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 445555555422 111222222235677899999999999876443233355666655555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 120 ~~l~~LH~~~i~H~di~p~nil~~~~--~~~kL~dfg~~~~~~ 160 (279)
T cd05057 120 KGMSYLEEKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLD 160 (279)
T ss_pred HHHHHHHhCCEEecccCcceEEEcCC--CeEEECCCccccccc
Confidence 788999999999999999999865 889999999988765
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-10 Score=124.77 Aligned_cols=139 Identities=22% Similarity=0.222 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|...++..||||+.+++-.. .-+|.+|.+
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--------------------------------------VEAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH--------------------------------------HHHHHHHHH
Confidence 679999999999999878888999987653210 001334544
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ...+.+...+.....+++|||++|.+|.+..... ....+...+...+.++. +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 54 VMKTLQH-----------------DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred HHHhcCC-----------------CCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 4444322 1123333333345668999999999987764321 11233333433333333 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 117 ~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~ 153 (260)
T cd05073 117 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIE 153 (260)
T ss_pred HHHhCCccccccCcceEEEcCC--CcEEECCCcceeecc
Confidence 8899999999999999999865 899999999987664
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=118.14 Aligned_cols=140 Identities=20% Similarity=0.270 Sum_probs=96.6
Q ss_pred ccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
|++|++|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999984 49999999987654321 00113344444
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.++.+ ..+++++. ....+++|||++|.+|.++........+...+...+.+++
T Consensus 45 ~~~l~~--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (215)
T cd00180 45 LKKLNH--------------------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG 104 (215)
T ss_pred HHhcCC--------------------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 444321 23444443 3567899999999998876442212455555444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
+..+|..|++|+|++|+||+++.. +++++|+|||++.......
T Consensus 105 l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 105 LEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred HHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCCc
Confidence 678999999999999999999961 3789999999998776543
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-11 Score=125.15 Aligned_cols=156 Identities=18% Similarity=0.202 Sum_probs=100.5
Q ss_pred ccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 120 DFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 120 ~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+|+ .+|+|.|-||+||.|+. +++--||+||.... + +. ......++++|+.
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---q----i~---------------------~~~v~~qlrREiE 74 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---Q----IL---------------------KTQVEHQLRREIE 74 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHH---H----HH---------------------HhcchhhhhheeE
Confidence 455 48999999999999997 58899999997421 1 00 1122233444443
Q ss_pred cHHHH--HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhc-CCCH---HHHH
Q 002092 198 FNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF-GVNK---QKVV 271 (968)
Q Consensus 198 ~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~---~~l~ 271 (968)
...-. .|+-++...|- .+.+-+|++||..++.+.....-... .++. ....
T Consensus 75 Iqs~L~hpnilrlY~~fh------------------------d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi 130 (281)
T KOG0580|consen 75 IQSHLRHPNILRLYGYFH------------------------DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYI 130 (281)
T ss_pred eecccCCccHHhhhhhee------------------------ccceeEEEEEecCCchHHHHHHhcccccccccchhHHH
Confidence 32211 14444444332 14455799999987776544221111 2332 2334
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHH
Q 002092 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 330 (968)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~ 330 (968)
..++.+ +..+|..+++|||+||+|+|++.+ |.+++.|||-+..-+...|..+|.-+
T Consensus 131 ~q~A~A-l~y~h~k~VIhRdiKpenlLlg~~--~~lkiAdfGwsV~~p~~kR~tlcgt~ 186 (281)
T KOG0580|consen 131 KQLANA-LLYCHLKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSNKRKTLCGTL 186 (281)
T ss_pred HHHHHH-HHHhccCCcccCCCCHHHhccCCC--CCeeccCCCceeecCCCCceeeeccc
Confidence 444444 556789999999999999999966 89999999998877767777776544
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=128.99 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||.......... -.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-------------------------------------ELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 5699999999999996 5899999997643211000 0022333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+...+. ....++||||++|.+|.+.. .........+...+.+++ +
T Consensus 68 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L 128 (297)
T cd06656 68 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 128 (297)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEecCCEEEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHH
Confidence 33333211 01122222222 45678999999999988764 233445555555444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||.+..+..
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~--~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 129 DFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 167 (297)
T ss_pred HHHHHCCcccCCCCHHHEEECCC--CCEEECcCccceEccC
Confidence 78899999999999999999865 8999999999876654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=137.31 Aligned_cols=151 Identities=14% Similarity=0.178 Sum_probs=104.3
Q ss_pred CccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
++.+.|+-++ -||.|.+|+||+++. ++|+-+||||+.|.....-+.++
T Consensus 16 dp~d~~ei~e--vig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~----------------------------- 64 (953)
T KOG0587|consen 16 DPADIFEIIE--VIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIEL----------------------------- 64 (953)
T ss_pred CCCCccEEEE--EEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHH-----------------------------
Confidence 4455554444 589999999999985 68999999999987653221111
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e------cCCCeEEecccCCCCCCCHHHHHh
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q------SSETVLILEFMDGIRLNDCESLEA 262 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~------~~~~vLVmE~i~G~~L~~~~~~~~ 262 (968)
|- |+-++.. ++++ ++..| . ..+.+||||||.|+++.|+..-..
T Consensus 65 ---------ey-nil~~~~----------------~hpn--v~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~ 116 (953)
T KOG0587|consen 65 ---------EY-NMLKKYS----------------HHPN--VATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK 116 (953)
T ss_pred ---------HH-HHHHhcc----------------CCCC--cceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc
Confidence 11 2222211 1222 22222 1 356799999999999999865322
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHH
Q 002092 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (968)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (968)
..++...++.++.+++ +..+|..-++|||+|-.|||++.+ |+++|+|||...+++....+
T Consensus 117 g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e--~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 117 GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc--CcEEEeeeeeeeeeeccccc
Confidence 2234455666666666 667788899999999999999976 99999999999999876544
|
|
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=124.68 Aligned_cols=78 Identities=22% Similarity=0.291 Sum_probs=59.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||+++.+|.+.... ....+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~--~~~kl~Dfg~~~ 143 (257)
T cd05116 67 AESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ--HYAKISDFGLSK 143 (257)
T ss_pred CCCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC--CeEEECCCcccc
Confidence 4456899999999998776432 22345555555444443 678999999999999999999865 789999999987
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 144 ~~~ 146 (257)
T cd05116 144 ALG 146 (257)
T ss_pred ccC
Confidence 664
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-10 Score=126.10 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=92.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|... ++..|++|.......+.. . ++.+|.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----~---------------------------------~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEEL----E---------------------------------DYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHH----H---------------------------------HHHHHH
Confidence 46999999999999975 688899998654321110 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+..+.+ ..-+.+...+. ....++||||++|.++.+........++...+...+.+++ +
T Consensus 54 ~~l~~l~h-----------------~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L 116 (282)
T cd06643 54 DILASCDH-----------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEAL 116 (282)
T ss_pred HHHHHCCC-----------------CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 11122222222 4567899999999988765322223345555555444443 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 117 ~~LH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 154 (282)
T cd06643 117 NYLHENKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNT 154 (282)
T ss_pred HHHHHCCeeecCCCcccEEEccC--CCEEEcccccccccc
Confidence 78899999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.9e-10 Score=119.31 Aligned_cols=139 Identities=14% Similarity=0.170 Sum_probs=87.0
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.++||+|++|.||. .-.++.. +||+.+++-... +-++++|.
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~-------------------------------------~~~~~rEi 47 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGG-------------------------------------DKEIRREL 47 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccch-------------------------------------HHHHHHHH
Confidence 47899999999996 2235555 699987642110 00134555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCC----C-e-EEecc--cCCCCCCCHHHHHhcCCCHH-HHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE----T-V-LILEF--MDGIRLNDCESLEAFGVNKQ-KVV 271 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~----~-v-LVmE~--i~G~~L~~~~~~~~~~~~~~-~l~ 271 (968)
+.+..+.+. ....-.|+++|. .++ . + +|||| +.|.+|.+... ....+.. ...
T Consensus 48 ~~l~~L~~~---------------~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~--~~~~~e~~~~~ 110 (210)
T PRK10345 48 KYYAHLSRR---------------LIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAE--QCRYEEDVAQL 110 (210)
T ss_pred HHHHHhhcc---------------CCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHH--cccccHhHHHH
Confidence 555555331 112334677764 222 2 2 78999 55788887753 2222222 234
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCceEEecC--CCCceEEEe-cccccc
Q 002092 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLD-FGLTKK 317 (968)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiD-FG~~~~ 317 (968)
..++..+.+.+|.+|++|||+||+|||++.. ++++++|+| ||....
T Consensus 111 ~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 111 RQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 5556566789999999999999999999853 234799999 554444
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.7e-10 Score=135.51 Aligned_cols=75 Identities=20% Similarity=0.212 Sum_probs=50.2
Q ss_pred eEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 243 VLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
++||||++| .+.+.... ....+....+...+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++.
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccchh
Confidence 489999987 33333211 112233333333333333 678999999999999999999854 25799999999876
Q ss_pred cC
Q 002092 318 LS 319 (968)
Q Consensus 318 l~ 319 (968)
+.
T Consensus 221 ~~ 222 (440)
T PTZ00036 221 LL 222 (440)
T ss_pred cc
Confidence 54
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-10 Score=127.40 Aligned_cols=80 Identities=19% Similarity=0.218 Sum_probs=60.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+...- ...+....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~--~~~~l~df~~~~ 150 (280)
T cd05581 74 EENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKD--MHIKITDFGTAK 150 (280)
T ss_pred CceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEecCCcccc
Confidence 3456899999999999776432 22345555444444443 677899999999999999999865 899999999988
Q ss_pred ccCHH
Q 002092 317 KLSSS 321 (968)
Q Consensus 317 ~l~~~ 321 (968)
.+...
T Consensus 151 ~~~~~ 155 (280)
T cd05581 151 VLDPN 155 (280)
T ss_pred ccCCc
Confidence 77553
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-10 Score=128.12 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=91.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++||+|++|.||+|+.+ +|+.||||..+....... ...+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------------------PFTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------------------chhHHHHH
Confidence 68999999999999975 789999998764322100 00123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-.++. ....++||||++| +|.+.........+...+...+.+++ +
T Consensus 55 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al 116 (291)
T cd07844 55 SLLKDLKH-----------------ANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGL 116 (291)
T ss_pred HHHhhCCC-----------------cceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 55544422 11122222332 4556899999987 66554322222345555444444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 153 (291)
T cd07844 117 AYCHQRRVLHRDLKPQNLLISER--GELKLADFGLARAK 153 (291)
T ss_pred HHHHhCCeecccCCHHHEEEcCC--CCEEECcccccccc
Confidence 78899999999999999999865 89999999988654
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.8e-10 Score=126.21 Aligned_cols=140 Identities=18% Similarity=0.176 Sum_probs=90.7
Q ss_pred ccccccceeEEEEEEeCC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~------G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||.|++|.||+|+..+ ++.||||+.+....... +-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA------------------------------------RKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH------------------------------------HHH
Confidence 579999999999998743 47899998653322110 012
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-------------c
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------F 263 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------~ 263 (968)
|.+|++.+.++.+. ..+.+...+. ....++||||++|.+|.+...... .
T Consensus 55 ~~~e~~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 117 (280)
T cd05049 55 FEREAELLTNFQHE-----------------NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117 (280)
T ss_pred HHHHHHHHHhcCCC-----------------CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence 34555555554320 0111222222 466799999999999887643211 1
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 264 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 264 ~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+....+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+
T Consensus 118 ~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~--~~~kl~d~g~~~~~ 172 (280)
T cd05049 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD--LVVKIGDFGMSRDV 172 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC--CeEEECCcccceec
Confidence 122333333333333 678899999999999999999866 89999999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=127.59 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=57.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCC-----CCceEEEe
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-----PHRPILLD 311 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiD 311 (968)
....+|||||++|.+|.++........+.......+.++. +..+|..|++|+|+||.||+++.++ ...+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 4667999999999998776432223345444444444433 6788999999999999999997531 12478999
Q ss_pred ccccccc
Q 002092 312 FGLTKKL 318 (968)
Q Consensus 312 FG~~~~l 318 (968)
||++...
T Consensus 168 ~g~~~~~ 174 (274)
T cd05076 168 PGVSFTA 174 (274)
T ss_pred Ccccccc
Confidence 9987543
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-10 Score=127.67 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=57.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
....++||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|++|.||+++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 456799999999999877643211 1233444444444433 67889999999999999999986
Q ss_pred CCCCceEEEecccccc
Q 002092 302 DPPHRPILLDFGLTKK 317 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~ 317 (968)
+ +.++|+|||++..
T Consensus 160 ~--~~~kl~dfg~~~~ 173 (303)
T cd05088 160 N--YVAKIADFGLSRG 173 (303)
T ss_pred C--CcEEeCccccCcc
Confidence 5 8899999999864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-10 Score=129.33 Aligned_cols=141 Identities=14% Similarity=0.175 Sum_probs=85.6
Q ss_pred ccccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 122 VETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 122 d~~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+...||.|++|.||+|+.+ +++.||||+....-.. .++
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~---------------------------------------~~~ 45 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS---------------------------------------MSA 45 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc---------------------------------------HHH
Confidence 3468999999999999964 5688999976532100 011
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHh--------cCCCH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVNK 267 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--------~~~~~ 267 (968)
.+|++.+.++.+ ..-+.+-..+. ....+++|||+++ .+.++..... ..+..
T Consensus 46 ~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~ 107 (317)
T cd07868 46 CREIALLRELKH-----------------PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPR 107 (317)
T ss_pred HHHHHHHHhcCC-----------------CCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCH
Confidence 234444444422 11122333332 2234799999976 4443322111 11333
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecC--CCCceEEEecccccccC
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~ 319 (968)
..+...+.+++ +..+|..|++|||+||.|||+..+ .++.++|+|||+++.++
T Consensus 108 ~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 108 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 33333333333 678899999999999999999532 24789999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=124.76 Aligned_cols=144 Identities=16% Similarity=0.130 Sum_probs=92.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|... +|+.||+|+.++..... . . ..-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~------------------------~------~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----A------------------------K------ARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----h------------------------h------hHHHHHHHH
Confidence 57999999999999985 89999999865311100 0 0 001133344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.+..... ...+....+...+.+++
T Consensus 54 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 116 (267)
T cd08224 54 DLLKQLDH-----------------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116 (267)
T ss_pred HHHHhCCC-----------------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHH
Confidence 44443321 00112222222 44568999999999987764311 11234445544444444
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~lh~~~i~h~dl~p~nil~~~~--~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 117 SALEHMHSKRIMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHhCCEecCCcChhhEEECCC--CcEEEeccceeeeccC
Confidence 678899999999999999999865 8899999999876643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-10 Score=127.81 Aligned_cols=78 Identities=23% Similarity=0.276 Sum_probs=59.0
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~ 154 (290)
T cd05613 78 TKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKE 154 (290)
T ss_pred CeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCC--CCEEEeeCcccee
Confidence 445799999999988776432 22344555444443333 778999999999999999999865 8999999999887
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
+..
T Consensus 155 ~~~ 157 (290)
T cd05613 155 FHE 157 (290)
T ss_pred ccc
Confidence 654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.4e-10 Score=124.54 Aligned_cols=138 Identities=14% Similarity=0.089 Sum_probs=91.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..||.|++|.||+|+. .+++.|+||......... . -.+.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~----~---------------------------------~~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY----V---------------------------------QPLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH----H---------------------------------HHHHHHH
Confidence 5799999999999996 478899999765432211 0 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCC--CHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~--~~~~l~~~l~~ 276 (968)
..+.++++ + .|.+++. ....+++|||++|.+|.+......... +...+...+.+
T Consensus 57 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~q 116 (268)
T cd06624 57 ALHSYLKH------------------R--NIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQ 116 (268)
T ss_pred HHHHhcCC------------------C--CeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHH
Confidence 55444432 1 1222221 345689999999999987654221222 34444433333
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+. +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+.
T Consensus 117 i~~al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 117 ILEGLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLA 160 (268)
T ss_pred HHHHHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecc
Confidence 33 678899999999999999999753 3789999999987653
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.2e-11 Score=115.20 Aligned_cols=142 Identities=17% Similarity=0.180 Sum_probs=85.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|.+|.|++|+.+ +++.||+|-.|-+-.+. ..-....+|+.+.+|.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddde-----------------------------gvpssalreicllkel 58 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-----------------------------GVPSSALREICLLKEL 58 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCC-----------------------------CCcHHHHHHHHHHHHh
Confidence 56999999999999975 68999999766321110 0011223344444454
Q ss_pred H--HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+ |+.|+.+ +.. ..+..||.|||+- .|...-......++.+.+-.-+++.+
T Consensus 59 khknivrl~d-------------------------vlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllr 112 (292)
T KOG0662|consen 59 KHKNIVRLHD-------------------------VLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLR 112 (292)
T ss_pred hhcceeehhh-------------------------hhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHh
Confidence 3 2233322 222 3445799999972 12111111112244433222233332
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
+...|.+++.|||+||.|++|..+ |+++|.|||+++.+.-..
T Consensus 113 gl~fchshnvlhrdlkpqnllin~n--gelkladfglarafgipv 155 (292)
T KOG0662|consen 113 GLGFCHSHNVLHRDLKPQNLLINRN--GELKLADFGLARAFGIPV 155 (292)
T ss_pred hhhhhhhhhhhhccCCcceEEeccC--CcEEecccchhhhcCCce
Confidence 344577999999999999999966 999999999998765443
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1e-09 Score=109.55 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=95.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.+++.|.=+.++.+... |.++++|..-|.--..-..|.+ ++ + -.-++||+
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~k------------------------lr----r-~Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEK------------------------LR----R-ERTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHH------------------------HH----H-HHHHHHHH
Confidence 36788888999998653 5679999765432211111211 11 1 12467999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (968)
.+.+++.. +|.+|.+|. .....|||||++|..|.+... .. ...+++.+-.. +.-
T Consensus 52 il~~a~~~------------------GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~--~~---~~~~~r~vG~~-vg~ 107 (204)
T COG3642 52 ILAKAREA------------------GVPVPIVYDVDPDNGLIVMEYIEGELLKDALE--EA---RPDLLREVGRL-VGK 107 (204)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHH--hc---chHHHHHHHHH-HHH
Confidence 99888752 688999997 566689999999999887632 21 12344444433 445
Q ss_pred HHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+|..||+|+||-+.||+++. +++.+||||+...
T Consensus 108 lH~~givHGDLTtsNiIl~~---~~i~~IDfGLg~~ 140 (204)
T COG3642 108 LHKAGIVHGDLTTSNIILSG---GRIYFIDFGLGEF 140 (204)
T ss_pred HHhcCeecCCCccceEEEeC---CcEEEEECCcccc
Confidence 79999999999999999974 4699999999763
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-10 Score=126.02 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=55.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcC----CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~----~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (968)
....+|||||++|.+|.++....... .+...+...+.++. +..+|..|++|+|+||.||+++.+ ++++|+||
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~df 144 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--LSVKIGDY 144 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC--CcEEEecc
Confidence 45678999999999998764322111 12222223222322 678899999999999999999865 89999999
Q ss_pred cccccc
Q 002092 313 GLTKKL 318 (968)
Q Consensus 313 G~~~~l 318 (968)
|++...
T Consensus 145 g~~~~~ 150 (269)
T cd05042 145 GLALEQ 150 (269)
T ss_pred cccccc
Confidence 998654
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-10 Score=127.08 Aligned_cols=142 Identities=20% Similarity=0.240 Sum_probs=93.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..|++|++|+||+|+.+ +|+.||+|+......... . +-.+.+|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------~----------~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-------------------------I----------KKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-------------------------c----------cHHHHHHH
Confidence 46899999999999985 799999998653211000 0 00123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||++|..+..+.. ....++...+...+.+++ +
T Consensus 52 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l 113 (286)
T cd07847 52 RMLKQLKH-----------------PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAV 113 (286)
T ss_pred HHHHhCCC-----------------CCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHH
Confidence 44444321 11122333333 445689999999977765432 122345555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~LH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 114 NFCHKHNCIHRDVKPENILITKQ--GQIKLCDFGFARILTG 152 (286)
T ss_pred HHHHHCCceecCCChhhEEEcCC--CcEEECccccceecCC
Confidence 78899999999999999999865 8999999999987754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-10 Score=125.58 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=92.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|..+ +|+.||+|+...+...... -.+.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ------------------------------------KQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHH------------------------------------HHHHHHH
Confidence 57999999999999985 7999999987654321110 0122233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....+|+|||++|.+|.++........+...+...+.+++ +
T Consensus 51 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 113 (265)
T cd06605 51 DILHKCNS-----------------PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL 113 (265)
T ss_pred HHHHHCCC-----------------CchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 33333211 00011111111 4556899999999999877543223344444444444433 6
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|. .|++|+|+||+||+++.+ +.++|+|||.+..+...
T Consensus 114 ~~lH~~~~i~H~dl~~~ni~~~~~--~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 114 TYLHEKHKIIHRDVKPSNILVNSR--GQIKLCDFGVSGQLVNS 154 (265)
T ss_pred HHHcCCCCeecCCCCHHHEEECCC--CCEEEeecccchhhHHH
Confidence 78899 999999999999999965 88999999998766543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.4e-10 Score=123.30 Aligned_cols=143 Identities=13% Similarity=0.116 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|++|++|+||+|+.+ +|+.|++|......... . ..-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~---------------------------------~~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--R---------------------------------EREEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--H---------------------------------HHHHHHHHH
Confidence 57999999999999974 79999999764321100 0 001233444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++++. .-+.+...+. ....++||||++|.+|.+..... ....+...+...+.++.
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a 113 (256)
T cd08529 51 RVLAKLDSS-----------------YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG 113 (256)
T ss_pred HHHHhcCCC-----------------CeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 444443220 0111111111 34568999999999998765432 12344544444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 l~~lH~~~i~h~dl~~~nili~~~--~~~~l~df~~~~~~~~ 153 (256)
T cd08529 114 LAHLHSKKILHRDIKSLNLFLDAY--DNVKIGDLGVAKLLSD 153 (256)
T ss_pred HHHHHHCCcccCCCCcceEEEeCC--CCEEEcccccceeccC
Confidence 678899999999999999999965 8999999999887654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.4e-10 Score=124.72 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=92.6
Q ss_pred ccccccceeEEEEEEeCCC----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLVDG----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G----~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||.|++|.||+|+..+. ..|+||+.+........ -.+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------~~~~ 55 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR------------------------------------EKFL 55 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH------------------------------------HHHH
Confidence 6799999999999987432 46899976543311100 0133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+|+..+.++.+ ...+.+..++.....++||||++|.+|.+.........+...+...+.+++
T Consensus 56 ~e~~~l~~~~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~ 118 (270)
T cd05056 56 QEAYIMRQFDH-----------------PHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLST 118 (270)
T ss_pred HHHHHHHhCCC-----------------CchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 45444444321 011222222335567899999999999877532222344444444433333
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 119 ~l~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 119 ALAYLESKRFVHRDIAARNVLVSSP--DCVKLGDFGLSRYLED 159 (270)
T ss_pred HHHHHHhCCeeccccChheEEEecC--CCeEEccCceeeeccc
Confidence 678899999999999999999865 8899999999887654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-10 Score=123.69 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=57.8
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+++|||++|.+|.++... ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~ 145 (260)
T cd05611 69 KDYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT--GHLKLTDFGLSR 145 (260)
T ss_pred CCeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEeecccce
Confidence 3456899999999999876432 12344444444333333 678899999999999999999865 889999999876
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
...
T Consensus 146 ~~~ 148 (260)
T cd05611 146 NGL 148 (260)
T ss_pred ecc
Confidence 543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-10 Score=125.90 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=57.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhc---------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCce
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAF---------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP 307 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i 307 (968)
.+..++||||++|.+|.+....... ..+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~--~~~ 158 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTV 158 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC--CCE
Confidence 4567899999999999876432111 122334444333333 678899999999999999999965 899
Q ss_pred EEEecccccccC
Q 002092 308 ILLDFGLTKKLS 319 (968)
Q Consensus 308 ~LiDFG~~~~l~ 319 (968)
+|+|||++..+.
T Consensus 159 ~l~dfg~~~~~~ 170 (277)
T cd05062 159 KIGDFGMTRDIY 170 (277)
T ss_pred EECCCCCccccC
Confidence 999999987553
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.2e-10 Score=129.88 Aligned_cols=52 Identities=15% Similarity=0.225 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~--~~vkL~DfG~a~~~~ 224 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 224 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC--CcEEEeccccchhcc
Confidence 3333444343433 778899999999999999999965 889999999988764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-10 Score=125.98 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=91.5
Q ss_pred ccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
||+|++|.||+|.. .+|+.||||+......... ..+..+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------------------------------KGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------------------------------hhhHHHHHHHHH
Confidence 68999999999986 4799999998754211100 011123345555
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
+.++++ ...+.+...+. ....+|||||++|.+|.+...... ..+....+...+.+++ +.
T Consensus 47 l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~ 109 (277)
T cd05577 47 LEKVSS-----------------RFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLE 109 (277)
T ss_pred HHhCCC-----------------CCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHH
Confidence 544421 11122223332 455789999999999887643221 1344444444333333 67
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 ~lH~~~i~H~di~p~Nil~~~~--~~~~l~dfg~~~~~~ 146 (277)
T cd05577 110 HLHQRRIVYRDLKPENVLLDDH--GNVRISDLGLAVELK 146 (277)
T ss_pred HHHhCCcccCCCCHHHEEECCC--CCEEEccCcchhhhc
Confidence 8899999999999999999865 899999999876553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.8e-10 Score=123.25 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=94.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+++|.|++|.||+|.. .+++.|++|+........ .+ .+.+|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~---------------------------------~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----FE---------------------------------IIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----HH---------------------------------HHHHHH
Confidence 6799999999999997 468899999876432210 00 112233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....+++|||++|.+|.+........++...+...+.+++ +
T Consensus 52 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 114 (262)
T cd06613 52 SMLKECRH-----------------PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGL 114 (262)
T ss_pred HHHHhCCC-----------------CChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 33333321 01122222222 4556899999999999876543324556555555444444 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 115 AYLHETGKIHRDIKGANILLTED--GDVKLADFGVSAQLTA 153 (262)
T ss_pred HHHHhCCceecCCChhhEEECCC--CCEEECccccchhhhh
Confidence 77899999999999999999965 8899999999876543
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.9e-10 Score=124.05 Aligned_cols=141 Identities=21% Similarity=0.207 Sum_probs=92.1
Q ss_pred ccccccceeEEEEEEeC-CC---CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G---~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+-||.|++|.||+|+.+ +| ..||||+.......... .+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 53 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 53 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH------------------------------------HHHH
Confidence 56899999999999974 34 36999987643221100 0133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.|+..+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.+++
T Consensus 54 ~e~~~l~~l~h-----------------~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~ 116 (269)
T cd05065 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIA 116 (269)
T ss_pred HHHHHHHhCCC-----------------cCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHH
Confidence 44444444321 11122222222 4556899999999998876543223345555554444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 117 ~al~~lH~~g~~H~dl~p~nili~~~--~~~kl~dfg~~~~~~ 157 (269)
T cd05065 117 AGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLE 157 (269)
T ss_pred HHHHHHHHCCEeecccChheEEEcCC--CcEEECCCccccccc
Confidence 678899999999999999999854 889999999887654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.5e-10 Score=125.92 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=57.8
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
....+|+|||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~ 172 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE 172 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence 445689999999999887643211 1122333333333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002092 302 DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +.++|+|||.++.+..
T Consensus 173 ~--~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 173 N--NVMKIADFGLARDVNN 189 (304)
T ss_pred C--CcEEECCCccceeccc
Confidence 5 8999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.9e-10 Score=122.93 Aligned_cols=139 Identities=19% Similarity=0.195 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|.. .|+.||||..+.... . . . .+.+|..
T Consensus 12 ~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~----~---------------------------~------~~~~e~~ 52 (256)
T cd05039 12 ATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-A----A---------------------------Q------AFLAEAS 52 (256)
T ss_pred eeeecCCCceEEEEEe-cCcEEEEEEeccchh-H----H---------------------------H------HHHHHHH
Confidence 5799999999999987 489999998753321 0 0 0 1223444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~--l 279 (968)
.+.++.+ ..-+.+...+. ....++||||++|.+|.+....... ......+...+.+++ +
T Consensus 53 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l 115 (256)
T cd05039 53 VMTTLRH-----------------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGM 115 (256)
T ss_pred HHHhcCC-----------------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4443321 01122222222 5667899999999998876432211 244444444444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||.+.....
T Consensus 116 ~~lh~~~i~H~di~p~Nili~~~--~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 116 EYLEEKNFVHRDLAARNVLVSED--LVAKVSDFGLAKEASQ 154 (256)
T ss_pred HHHHhCCccchhcccceEEEeCC--CCEEEccccccccccc
Confidence 78899999999999999999865 8999999999887643
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=123.91 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=88.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+...+..... +-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL------------------------------------QKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH------------------------------------HHHHHHHH
Confidence 5799999999999986 5899999998754321100 00133444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+...+. ....+|||||++|.++.... ..+...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l 108 (279)
T cd06619 51 EILYKCDS-----------------PYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGL 108 (279)
T ss_pred HHHHhCCC-----------------CCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 45568999999998885432 122333333333322 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 109 ~~lH~~~i~H~dlkp~Nill~~~--~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 109 TYLWSLKILHRDVKPSNMLVNTR--GQVKLCDFGVSTQLVN 147 (279)
T ss_pred HHHHHCCEeeCCCCHHHEEECCC--CCEEEeeCCcceeccc
Confidence 78899999999999999999865 8999999999876643
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.7e-10 Score=137.27 Aligned_cols=77 Identities=21% Similarity=0.314 Sum_probs=52.9
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCC------------------HH----HHHHHHHHHHHHHHHhcCccccCCCCCce
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVN------------------KQ----KVVEEITRAYAHQIYVDGFFNGDPHPGNF 297 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~------------------~~----~l~~~l~~~~l~~i~~~G~~H~D~hPgNI 297 (968)
...+|||||+++.+|.++......... .. .++..++.. +.++|..|++|||+||.||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~a-L~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFA-LDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHH-HHHHHHCCEEeCcCCHHHE
Confidence 456799999999988766431110000 01 122222222 6788999999999999999
Q ss_pred EEecCCCCceEEEeccccccc
Q 002092 298 LVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 298 lv~~~~~g~i~LiDFG~~~~l 318 (968)
|++.+ ++.++|+|||+++.+
T Consensus 287 Ll~~~-~~~~KL~DFGlA~~l 306 (566)
T PLN03225 287 IFSEG-SGSFKIIDLGAAADL 306 (566)
T ss_pred EEeCC-CCcEEEEeCCCcccc
Confidence 99853 378999999998755
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.4e-10 Score=114.34 Aligned_cols=70 Identities=37% Similarity=0.716 Sum_probs=55.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
++..+|+|||++|.+|.+...+. +.+.+.+.+ .+.++|.+|++|+||||||++++. +.+++|||+..+..
T Consensus 115 ~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~~---~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 115 TSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVSN---NGIRIIDTQGKRMS 184 (229)
T ss_pred eeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEEC---CcEEEEECcccccc
Confidence 56778999999999999875432 234444554 479999999999999999999984 46999999987754
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.1e-10 Score=127.43 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=58.8
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+++|||++|.+|.+.. .....+...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~--~~~kL~dfg~~~ 165 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD--GRVKLSDFGFCA 165 (297)
T ss_pred CCeEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC--CcEEEeechhHh
Confidence 35568999999998887653 233345555444444433 678899999999999999999865 899999999887
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 166 ~~~~ 169 (297)
T cd06659 166 QISK 169 (297)
T ss_pred hccc
Confidence 6543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.11 E-value=3e-10 Score=122.15 Aligned_cols=144 Identities=19% Similarity=0.145 Sum_probs=95.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++||+|++|.||+|+.+ +|+.|+||........ ..+ .. ++.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~---------------------------~~------~~~~e~ 50 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEA---------------------------LK------SIMQEI 50 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHH---------------------------HH------HHHHHH
Confidence 68999999999999874 7899999987643211 000 00 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ...+.+...+. ....+++|||++|.+|.+..... ...+...+...+.+++ +
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l 112 (254)
T cd06627 51 DLLKNLKH-----------------PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGL 112 (254)
T ss_pred HHHHhCCC-----------------CCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHH
Confidence 44444321 00112222222 45568999999999887764322 3345554444444443 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
..+|..|++|+|++|+||+++.+ +.++|+|||.+..+....
T Consensus 113 ~~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 113 AYLHEQGVIHRDIKAANILTTKD--GVVKLADFGVATKLNDVS 153 (254)
T ss_pred HHHhhCCcccCCCCHHHEEECCC--CCEEEeccccceecCCCc
Confidence 78899999999999999999865 899999999998776543
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-10 Score=125.58 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=91.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.|+||......... .-.+.+|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-------------------------------------~~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-------------------------------------KELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-------------------------------------HHHHHHHH
Confidence 4699999999999996 479999999764321110 00123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+...+. ....++||||++|.+|.+... ........+...+.++. +
T Consensus 69 ~~l~~~~h-----------------~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL 129 (296)
T cd06654 69 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQAL 129 (296)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 33333211 01122222222 456789999999999987642 33345555555444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~LH~~gi~H~dLkp~Nill~~~--~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 130 EFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (296)
T ss_pred HHHHHCCcccCCCCHHHEEEcCC--CCEEECccccchhccc
Confidence 78899999999999999999865 8899999998876544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-10 Score=129.18 Aligned_cols=77 Identities=22% Similarity=0.361 Sum_probs=58.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.++. .....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD--GRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCEEEccCcchh
Confidence 34568999999999887763 233345555555444444 678899999999999999999865 899999999886
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 167 ~~~ 169 (292)
T cd06658 167 QVS 169 (292)
T ss_pred hcc
Confidence 553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-10 Score=133.46 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=52.6
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++||||+.+ .|.+... ....++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~a~~~ 153 (372)
T cd07853 78 EIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN--CVLKICDFGLARVE 153 (372)
T ss_pred eEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC--CCEEeccccceeec
Confidence 45899999975 3333211 122344444444333333 778899999999999999999865 89999999998754
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
.
T Consensus 154 ~ 154 (372)
T cd07853 154 E 154 (372)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.6e-10 Score=121.34 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||++..+ +|+.||+|..+-..... +. + ++..|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~~-----------------------~----------~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---AV-----------------------E----------DSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---HH-----------------------H----------HHHHHH
Confidence 57999999999999974 79999999865221100 00 0 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.+ ..-+.+...+. ....+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 50 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 112 (255)
T cd08219 50 VLLAKMKH-----------------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG 112 (255)
T ss_pred HHHHhCCC-----------------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 33333221 11122333333 566789999999988876543211 2234444444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 113 l~~lH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 113 VQHIHEKRVLHRDIKSKNIFLTQN--GKVKLGDFGSARLLTS 152 (255)
T ss_pred HHHHhhCCcccCCCCcceEEECCC--CcEEEcccCcceeecc
Confidence 788999999999999999999865 8999999999876644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=125.99 Aligned_cols=140 Identities=19% Similarity=0.157 Sum_probs=91.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||+|+.+....... .. ++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------~~------~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAI------------------------------RN------QIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHH------------------------------HH------HHHHHH
Confidence 5699999999999997 4789999998764322110 00 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+...+. ....+|||||++|.+|.++.... ..+....+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l 112 (308)
T cd06615 51 KVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGL 112 (308)
T ss_pred HHHHhCCC-----------------CCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 55554422 11123333333 46678999999999998774322 2234333333333332 6
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|. .|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~lH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 151 (308)
T cd06615 113 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 151 (308)
T ss_pred HHHHhhCCEEECCCChHHEEEecC--CcEEEccCCCccccc
Confidence 67786 699999999999999865 889999999886553
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.9e-10 Score=123.87 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=56.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCC-----CceEEEe
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLD 311 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiD 311 (968)
....+++|||++|.+|...........+...+...+.++. +..+|..|++|+|+||.|||++.++. ..++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 4567999999999988765432222345544444444433 77889999999999999999985421 1388999
Q ss_pred ccccccc
Q 002092 312 FGLTKKL 318 (968)
Q Consensus 312 FG~~~~l 318 (968)
||++..+
T Consensus 156 ~g~~~~~ 162 (262)
T cd05077 156 PGIPITV 162 (262)
T ss_pred CCCCccc
Confidence 9987655
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.6e-10 Score=123.33 Aligned_cols=77 Identities=23% Similarity=0.286 Sum_probs=57.0
Q ss_pred CCeEEecccCCCCCCCHHHHHh-----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecc
Q 002092 241 ETVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
..+++|||++|.+|.+...... ..++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg 157 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN--MNVCVADFG 157 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC--CCEEECCCC
Confidence 4589999999998876543221 1133444444444433 678899999999999999999865 889999999
Q ss_pred cccccC
Q 002092 314 LTKKLS 319 (968)
Q Consensus 314 ~~~~l~ 319 (968)
+++.+.
T Consensus 158 ~~~~~~ 163 (272)
T cd05075 158 LSKKIY 163 (272)
T ss_pred cccccC
Confidence 988764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-10 Score=125.54 Aligned_cols=140 Identities=21% Similarity=0.214 Sum_probs=87.0
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+....... +..+.+|
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~e 53 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV------------------------------------PFTAIRE 53 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC------------------------------------cHHHHHH
Confidence 35799999999999987 4799999998653321110 1112345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+..+.++.+ ..-+.+-..+. ....++||||++| ++.+.............+...+.++.
T Consensus 54 ~~~l~~l~h-----------------~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~ 115 (291)
T cd07870 54 ASLLKGLKH-----------------ANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRG 115 (291)
T ss_pred HHHHHhcCC-----------------CCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 544444422 01122222222 3456899999975 43332211112233333333333333
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 116 L~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~ 153 (291)
T cd07870 116 LAYIHGQHILHRDLKPQNLLISYL--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHhCCcccCCCChHHEEEcCC--CcEEEecccccccc
Confidence 678899999999999999999865 89999999988653
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.4e-10 Score=125.61 Aligned_cols=142 Identities=20% Similarity=0.197 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||||+.+...... .. +-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-----------------------------GI------PNQALREI 50 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc-----------------------------hh------hHHHHHHH
Confidence 4689999999999997 479999999875432100 00 00123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||+ |.+|.+........++...+...+.+++ +
T Consensus 51 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 112 (286)
T cd07832 51 KALQACQH-----------------PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGV 112 (286)
T ss_pred HHHHhCCC-----------------CCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 45568999999 9888776433333355555544444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~lH~~~i~H~dl~p~ni~~~~~--~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 113 AYMHANGIMHRDLKPANLLISAD--GVLKIADFGLARLFSE 151 (286)
T ss_pred HHHHHCCeecCCcCHHHEEEcCC--CcEEEeeeeecccccC
Confidence 78899999999999999999865 8899999999887654
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.4e-10 Score=125.39 Aligned_cols=142 Identities=19% Similarity=0.225 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeC--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
+.||+|++|.||+|+.. ++..||+|+.++..... +.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~--------------------------------- 67 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL--------------------------------- 67 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH---------------------------------
Confidence 68999999999999852 24579999887643211 00
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh------------
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------ 262 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------ 262 (968)
-++..|...+.++.+. ..-+.+...+. ....++||||++|.+|.++.....
T Consensus 68 ~~~~~e~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~ 131 (307)
T cd05098 68 SDLISEMEMMKMIGKH----------------KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131 (307)
T ss_pred HHHHHHHHHHHHhcCC----------------CCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence 0122344444443210 01122222222 456789999999999887753211
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 ---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 132 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~a~~~~ 191 (307)
T cd05098 132 VPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 191 (307)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC--CcEEECCCccccccc
Confidence 1233444444444443 778899999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.9e-10 Score=127.20 Aligned_cols=142 Identities=13% Similarity=0.186 Sum_probs=86.4
Q ss_pred cccccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 121 FVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 121 ~d~~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
++...||.|++|.||+|+.+ +++.||||..+..-. ...
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------------------------------~~~ 44 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------------------------------SMS 44 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------------------------------cHH
Confidence 34467999999999999975 457899997653210 001
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHh--------cCCC
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 266 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--------~~~~ 266 (968)
+.+|++.+.++.+ ...+.+-.++. ....++||||++| .+.+...... ..+.
T Consensus 45 ~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07867 45 ACREIALLRELKH-----------------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP 106 (317)
T ss_pred HHHHHHHHHhCCC-----------------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCC
Confidence 2234444444322 11233333332 2345799999986 3333322110 1123
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecC--CCCceEEEecccccccC
Q 002092 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~ 319 (968)
...+...+.+++ +..+|..|++|+|+||.||++..+ .++.++|+|||+++.+.
T Consensus 107 ~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 107 RSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 333333333333 678899999999999999999522 24789999999998664
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.8e-10 Score=128.06 Aligned_cols=153 Identities=18% Similarity=0.250 Sum_probs=94.8
Q ss_pred hhhCCCccccccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChh-hhhHhhHHHHHHHHHHHHHhCCCCCCcch
Q 002092 108 REFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (968)
Q Consensus 108 ~elg~~~~~~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~-~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (968)
+++++.+.++...|. .++||+|++|.||+|+. .+|+.||||+.+.... +...
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------- 58 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFA------------------------- 58 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccch-------------------------
Confidence 355555555555554 57999999999999996 4799999998653211 1000
Q ss_pred HHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCH
Q 002092 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDC 257 (968)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~ 257 (968)
.++.+|.+.+.++.+. .-+.+..++. ....++||||+.+ .+.
T Consensus 59 -----------~~~~~e~~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-- 107 (342)
T cd07879 59 -----------KRAYRELTLLKHMQHE-----------------NVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQ-- 107 (342)
T ss_pred -----------hHHHHHHHHHHhcCCC-----------------CccchhheecccccCCCCceEEEEeccccc-CHH--
Confidence 0122233333333210 0011111111 1335899999964 332
Q ss_pred HHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
......+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 108 -~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~--~~~kL~dfg~~~~~~ 168 (342)
T cd07879 108 -KIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED--CELKILDFGLARHAD 168 (342)
T ss_pred -HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCCCCcCCC
Confidence 22223455555554444443 678899999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.8e-10 Score=125.64 Aligned_cols=139 Identities=16% Similarity=0.176 Sum_probs=92.7
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
...++.|+++.||+|+. +|+.||||+.+...... ..+++ .|.+|+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~----------~~~~E~ 69 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLID----------ITENEI 69 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHHH----------HHHHHH
Confidence 45789999999999998 79999999876431100 00011 134566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
..+.++++ + .|.+++. ....+|||||++|++|.+.... ....+.......+
T Consensus 70 ~~l~~l~h------------------~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~i~ 128 (283)
T PHA02988 70 KNLRRIDS------------------N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK-EKDLSFKTKLDMA 128 (283)
T ss_pred HHHHhcCC------------------C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh-CCCCChhHHHHHH
Confidence 66666533 1 2223321 2345899999999999887532 2234443334444
Q ss_pred HHHH--HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++. +..+|. .|++|+|++|.||+++.+ +.++|+|||++..++
T Consensus 129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~--~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN--YKLKIICHGLEKILS 174 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCcCChhhEEECCC--CcEEEcccchHhhhc
Confidence 4433 667887 599999999999999965 899999999987554
|
|
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.1e-10 Score=123.81 Aligned_cols=77 Identities=16% Similarity=0.208 Sum_probs=57.0
Q ss_pred CeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+++|||+.|.+|.+...... ..+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~--~~~~l~Dfg~~~~~ 161 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC--CCEEEccCCCceec
Confidence 579999999999887643211 1234444444333333 678999999999999999999865 78999999998766
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 162 ~~ 163 (272)
T cd06637 162 DR 163 (272)
T ss_pred cc
Confidence 43
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-10 Score=126.63 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=89.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||+|+.+...... ..+.++.+|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-----------------------------------GVPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc-----------------------------------cCccchhHHH
Confidence 46899999999999974 79999999865321100 0011233344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++. .-+.+-..+. ....++||||++| ++.+.........+...+...+.+++ +
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 112 (284)
T cd07839 51 CLLKELKHK-----------------NIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGL 112 (284)
T ss_pred HHHHhcCCC-----------------CeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444443210 0011111111 4556899999986 44443221122345555555444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 113 ~~LH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 150 (284)
T cd07839 113 AFCHSHNVLHRDLKPQNLLINKN--GELKLADFGLARAFG 150 (284)
T ss_pred HHHHHCCEecCCCCHHHEEEcCC--CcEEECccchhhccC
Confidence 78899999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-10 Score=127.41 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=91.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||+|+.+...... .....+.+|.
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----------------------------------GIPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------------------CCcchhhHHH
Confidence 4699999999999997 479999999875332110 0011233455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+.+.++++ ..-+.+..++. . ...++||||++| +|.++.......+....+...+.+++
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 58 TLLLNLRH-----------------PNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred HHHHhCCC-----------------CCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 55554432 11223333332 1 346899999986 55444322222344444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLTDK--GCLKIADFGLARTYGL 160 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC--CCEEECccceeeecCC
Confidence 778999999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.1e-10 Score=123.68 Aligned_cols=140 Identities=16% Similarity=0.231 Sum_probs=89.9
Q ss_pred ccccccceeEEEEEEeCC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~------G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||.|++|.||+|.... ++.||+|+.+........ . +
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~------------------------------~------~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ------------------------------Q------E 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHH------------------------------H------H
Confidence 579999999999998632 267999987643221110 0 1
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (968)
|.+|.+.+.++.+ ..-+.+-..+. ....+++|||++|.+|.+......
T Consensus 55 ~~~ei~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05048 55 FRQEAELMSDLQH-----------------PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV 117 (283)
T ss_pred HHHHHHHHHhcCC-----------------cccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccc
Confidence 3344444444321 00111212222 455689999999999877643211
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++...+...+.++. +..+|..|++|+|+||.||+++++ +.++|+|||++..+
T Consensus 118 ~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~L~dfg~~~~~ 174 (283)
T cd05048 118 KSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG--LTVKISDFGLSRDI 174 (283)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC--CcEEECCCcceeec
Confidence 1233444444444433 678899999999999999999865 88999999998765
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-10 Score=123.54 Aligned_cols=141 Identities=22% Similarity=0.235 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEeC-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|++|.||+|+.. +++.||||+.++...... +-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~------------------------------------~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH------------------------------------RSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHH------------------------------------HHHH
Confidence 57999999999999863 478999998875433200 1123
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|.+.+.++.+ ..-+.+..... ....+++|||++|.+|.+.........+...+...+.
T Consensus 54 ~~ei~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 116 (284)
T cd05038 54 EREIEILRTLDH-----------------ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSS 116 (284)
T ss_pred HHHHHHHHhCCC-----------------CChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHH
Confidence 344444433321 00111111111 2246899999999999876532222345555444444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~l~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05038 117 QICKGMDYLGSQRYIHRDLAARNILVESE--DLVKISDFGLAKVLP 160 (284)
T ss_pred HHHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccccccccc
Confidence 433 678899999999999999999865 899999999998776
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-10 Score=122.51 Aligned_cols=146 Identities=16% Similarity=0.084 Sum_probs=91.5
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|+||+|+.+ +|+.|++|+.......... .+..+. +.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------~~~~~~------~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG--------------------------QEAVKQ------LEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc--------------------------hHHHHH------HHHH
Confidence 367999999999999985 8999999987542211000 000011 2233
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..-+.++.+ ..-+.+..... ....+++|||++|.+|.+.... ....+...+...+.+++
T Consensus 53 ~~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 114 (258)
T cd06632 53 IALLSKLQH-----------------PNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLG 114 (258)
T ss_pred HHHHHhcCC-----------------CCchheeeeEecCCeEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 333333321 00111222222 3556899999999998776431 12244444333333322
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 l~~lH~~~i~H~dl~~~ni~~~~~--~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 115 LEYLHDRNTVHRDIKGANILVDTN--GVVKLADFGMAKQVVE 154 (258)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 678899999999999999999865 8999999999876643
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.8e-10 Score=122.75 Aligned_cols=148 Identities=16% Similarity=0.117 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..||.|++|+||+|.. .+++.||||+........-..+ ...++.+ .+.+|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~----------------------~~~~~~~------~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKD----------------------RKRSMLD------ALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhH----------------------HHHHHHH------HHHHHH
Confidence 5789999999999987 4789999998754321110000 0001111 233454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+..... ....+++|||++|.+|.+.... ...++...+...+.+++ +
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l 119 (267)
T cd06628 58 ALLKELQH-----------------ENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGL 119 (267)
T ss_pred HHHHhcCC-----------------CCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHH
Confidence 44444422 01122222222 5667899999999988776432 12233333333333333 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 120 ~~lH~~~ivH~di~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06628 120 NYLHNRGIIHRDIKGANILVDNK--GGIKISDFGISKKLE 157 (267)
T ss_pred HHHHhcCcccccCCHHHEEEcCC--CCEEecccCCCcccc
Confidence 78899999999999999999865 899999999988775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.4e-10 Score=121.39 Aligned_cols=142 Identities=16% Similarity=0.140 Sum_probs=90.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.+|.|++|.||+|+.+ +|+.||||......... .. .+ .+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~---------------------------~~------~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RE---------------------------RK------AAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HH---------------------------HH------HHHHHH
Confidence 57899999999999974 68999999764211100 00 00 122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (968)
+.+.++++ ...+.+...+. ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~ 113 (257)
T cd08223 51 QLLSQLKH-----------------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAM 113 (257)
T ss_pred HHHHhCCC-----------------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 33333321 11122222222 223579999999998876643221 2244555555444443
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~l~~lH~~~i~H~di~p~nil~~~~--~~~~l~df~~~~~~~ 153 (257)
T cd08223 114 ALQYLHEKHILHRDLKTQNVFLTRT--NIIKVGDLGIARVLE 153 (257)
T ss_pred HHHHHHhCCeeccCCCchhEEEecC--CcEEEecccceEEec
Confidence 678999999999999999999865 889999999987663
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.8e-10 Score=122.72 Aligned_cols=140 Identities=21% Similarity=0.186 Sum_probs=91.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|.. ++++.||+|+...+... . . ++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-----~-----------------------~----------~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----V-----------------------E----------EFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-----H-----------------------H----------HHHHHH
Confidence 5799999999999997 46899999986543110 0 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 54 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHhCCC-----------------CChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 44433321 01122222222 455689999999999987643211 1234444443333333
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++++ +.++|+|||++..+..
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~df~~~~~~~~ 156 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 156 (263)
T ss_pred HHHHHhCCEeecccCcceEEEcCC--CcEEeCCCcccccccc
Confidence 678899999999999999999865 8999999999877653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.3e-10 Score=121.05 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=92.3
Q ss_pred cccccceeEEEEEEeC--C--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 125 PLATASIAQVHRATLV--D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 125 plgsaSigqV~~A~l~--~--G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
-||.|++|+||+|+.. + +..||+|+.+...... .+-++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA------------------------------------GKKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchH------------------------------------HHHHHHH
Confidence 4899999999999853 3 3789999876442210 0112333
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
|.+.+.++.+ ..-+.+...+.....++||||++|.+|.+..... .......+...+.+++
T Consensus 46 e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~ 107 (257)
T cd05060 46 EASVMAQLDH-----------------PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMG 107 (257)
T ss_pred HHHHHHhcCC-----------------CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence 4444443321 1112233333355678999999999988764322 2355555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 108 l~~lh~~~i~H~di~p~nili~~~--~~~kl~df~~~~~~~ 146 (257)
T cd05060 108 MAYLESKHFVHRDLAARNVLLVNR--HQAKISDFGMSRALG 146 (257)
T ss_pred HHHHhhcCeeccCcccceEEEcCC--CcEEeccccccceee
Confidence 678899999999999999999865 899999999988664
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.4e-10 Score=125.54 Aligned_cols=141 Identities=16% Similarity=0.134 Sum_probs=89.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- .. -.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------------------------~~----------~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-------------------------VP----------STAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCC-------------------------ch----------HHHHHHH
Confidence 57999999999999974 799999998753211100 00 0122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--cCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (968)
..+.++.+ ..-+.+-..+. ....++||||++| .+.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 112 (285)
T cd07861 51 SLLKELQH-----------------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQ 112 (285)
T ss_pred HHHHhcCC-----------------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 44444321 01122222222 4567899999986 4544322111 2244454444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~L~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 152 (285)
T cd07861 113 GILFCHSRRVLHRDLKPQNLLIDNK--GVIKLADFGLARAFG 152 (285)
T ss_pred HHHHHHhCCeeecCCCHHHEEEcCC--CcEEECcccceeecC
Confidence 678899999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-10 Score=136.50 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=84.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||.||+|+. .+++.||||+.+.... .. +. +..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~------------------------------~~------~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YT------------------------------RD------AKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hH------------------------------HH------HHHHH
Confidence 5799999999999997 4788999998753110 00 00 11222
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..++++++.-. ......+.+...+. ....+||||++ |..|.++.. ....+....+...+.+++
T Consensus 177 ~~l~~l~~~~~-----------~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~a 243 (467)
T PTZ00284 177 QFMEKVRQADP-----------ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVA 243 (467)
T ss_pred HHHHHHhhcCc-----------ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33333332100 00011122333333 24568999998 545544422 222344444444444443
Q ss_pred HHHHHh-cCccccCCCCCceEEecCC--------------CCceEEEecccccc
Q 002092 279 AHQIYV-DGFFNGDPHPGNFLVSKDP--------------PHRPILLDFGLTKK 317 (968)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~--------------~g~i~LiDFG~~~~ 317 (968)
+..+|. .|++||||||+|||++.++ .+.++|+|||.+..
T Consensus 244 L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 244 LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence 778897 5999999999999998541 12589999997653
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.4e-10 Score=124.15 Aligned_cols=143 Identities=17% Similarity=0.139 Sum_probs=92.1
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||.|++|.||+|..+ .+..||+|......... .+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ------------------------------------DESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH------------------------------------HHHH
Confidence 57999999999999975 35778899764322111 1123
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc------CCCHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF------GVNKQKV 270 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~------~~~~~~l 270 (968)
|.+|...+.++.+. .-+.+-.... ....++||||++|.+|.++...... .++...+
T Consensus 56 ~~~e~~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~ 118 (277)
T cd05036 56 FLMEALIMSKFNHQ-----------------NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL 118 (277)
T ss_pred HHHHHHHHHhCCCC-----------------CEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHH
Confidence 44555544444220 0112222121 4567899999999999876432211 2344444
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccC
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (968)
...+.+++ +..+|..|++|+|+||.||+++.++ +..++|+|||++..+.
T Consensus 119 ~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 44444443 6788999999999999999998542 2358999999988763
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.2e-10 Score=124.45 Aligned_cols=143 Identities=17% Similarity=0.196 Sum_probs=89.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||.|++|.||+|+.. +|+.||||+.+...... + ....+.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~---~--------------------------------~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE---G--------------------------------IPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc---C--------------------------------CchHHHHHH
Confidence 46899999999999974 79999999765321100 0 001233454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecC------CCeEEecccCCCCCCCHHHHHh----cCCCHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS------ETVLILEFMDGIRLNDCESLEA----FGVNKQKVVE 272 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~------~~vLVmE~i~G~~L~~~~~~~~----~~~~~~~l~~ 272 (968)
..+.++.+. ...+.+..++... ..++||||++| ++.+...... ..++...+..
T Consensus 52 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 114 (295)
T cd07837 52 SLLQMLSES----------------IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114 (295)
T ss_pred HHHHHccCC----------------CCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence 444444321 0112222222211 14899999997 5655432211 1234455544
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 115 ~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccceecC
Confidence 444444 678899999999999999999862 3789999999987653
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.1e-10 Score=121.44 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|++|++|.||+|+.+ +++.|++|..+.... . -++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~---------------------------------~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------L---------------------------------QEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------H---------------------------------HHHHHHH
Confidence 46999999999999985 589999998653211 0 0133344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.+........++...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l 112 (256)
T cd06612 50 SILKQCDS-----------------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL 112 (256)
T ss_pred HHHHhCCC-----------------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 44444311 11122222222 4556899999999999887543334455555555444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+...
T Consensus 113 ~~lh~~~i~H~dl~~~ni~~~~~--~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 113 EYLHSNKKIHRDIKAGNILLNEE--GQAKLADFGVSGQLTDT 152 (256)
T ss_pred HHHHHCCcccCCCCcceEEECCC--CcEEEcccccchhcccC
Confidence 78899999999999999999865 88999999998877543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.7e-10 Score=124.64 Aligned_cols=140 Identities=14% Similarity=0.191 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.|+||...-..... .+ .+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------~~----------~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK---------------------------KE----------LIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch---------------------------HH----------HHHHHH
Confidence 4699999999999986 589999999764211000 00 122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+++ ..-+.+-..+. ....++||||++|.+|.+... ....+...+...+.+++ +
T Consensus 68 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al 128 (296)
T cd06655 68 LVMKELKN-----------------PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQAL 128 (296)
T ss_pred HHHHhcCC-----------------CceeeeeeeEecCceEEEEEEecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 33333321 00111112222 456789999999999877642 33455555555444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~--~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 129 EFLHANQVIHRDIKSDNVLLGMD--GSVKLTDFGFCAQITPE 168 (296)
T ss_pred HHHHHCCcccCCCCHHHEEECCC--CCEEEccCccchhcccc
Confidence 78899999999999999999865 89999999998876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.9e-10 Score=122.69 Aligned_cols=144 Identities=17% Similarity=0.160 Sum_probs=92.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|+.|++|.||+|+. .+|+.||||+.++-... +. ..+.++.+|.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~------------------------------~~~~~~~~e~ 53 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DA------------------------------KARQDCVKEI 53 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CH------------------------------HHHHHHHHHH
Confidence 5799999999999997 48999999976531100 00 0111233454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.++.... ....+...+...+.++.
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 116 (267)
T cd08228 54 DLLKQLNH-----------------PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLC 116 (267)
T ss_pred HHHHhCCC-----------------cceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHH
Confidence 44444321 00112222222 45668999999999887764321 11234444433333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.+.|+|||++..+..
T Consensus 117 ~~l~~LH~~~i~H~dl~~~nil~~~~--~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 117 SAVEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHhhCCeeCCCCCHHHEEEcCC--CCEEECccccceeccc
Confidence 677899999999999999999865 8899999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.6e-10 Score=124.00 Aligned_cols=143 Identities=18% Similarity=0.148 Sum_probs=90.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+|+.||||.....-.. +.. ...++.+|.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~----~~~------------------------------~~~~~~~e~ 53 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM----DAK------------------------------ARADCIKEI 53 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh----hHH------------------------------HHHHHHHHH
Confidence 5799999999999996 58999999965421000 000 011233444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+.+. .-+.+-..+. ....+++|||++|.+|.++.... ....+...+...+.+++
T Consensus 54 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 116 (267)
T cd08229 54 DLLKQLNHP-----------------NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116 (267)
T ss_pred HHHHHccCC-----------------chhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 444433210 0011111111 34568999999999998764321 11234444444444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd08229 117 SALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFS 157 (267)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CCEEECcchhhhccc
Confidence 678899999999999999999865 889999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.9e-10 Score=125.45 Aligned_cols=79 Identities=22% Similarity=0.272 Sum_probs=57.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+.... ...+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~--~~~~l~dfg~~~ 153 (288)
T cd05583 77 DTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE--GHVVLTDFGLSK 153 (288)
T ss_pred CCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEEECcccc
Confidence 3445799999999888765321 22344444444333333 678899999999999999999865 889999999987
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 154 ~~~~ 157 (288)
T cd05583 154 EFLA 157 (288)
T ss_pred cccc
Confidence 6543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.8e-10 Score=123.24 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=60.8
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+++|||++|.+|.+........++...+...+.++. +..+|..|++|+|+||.||+++.+ ++++|+|||+++
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~--~~~kl~Dfg~~~ 157 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD--SIVQIADFGVAD 157 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEEcCCccce
Confidence 4456799999999999877543333445555554444443 678899999999999999999865 889999999998
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+.+
T Consensus 158 ~~~~ 161 (279)
T cd05111 158 LLYP 161 (279)
T ss_pred eccC
Confidence 6643
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-10 Score=123.85 Aligned_cols=142 Identities=14% Similarity=0.189 Sum_probs=88.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+.+ +|+.||||+.+....... +.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------------------------------------QKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------------------------------------HHHHHHHH
Confidence 56999999999999974 799999998765432110 00111122
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~ 278 (968)
....+. .. ...-+.+...+. ....+++|||++| +|.++... .....+...+...+.+++
T Consensus 51 ~~~~~~---~~-------------~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~ 113 (283)
T cd06617 51 DISMRS---VD-------------CPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIV 113 (283)
T ss_pred HHHHHH---cC-------------CCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 221111 11 011122333332 5667899999986 44433221 111244444444444444
Q ss_pred --HHHHHhc-CccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|.. |++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 114 ~~l~~lH~~~~i~h~dlkp~nil~~~~--~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 114 KALEYLHSKLSVIHRDVKPSNVLINRN--GQVKLCDFGISGYLVD 156 (283)
T ss_pred HHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 6788886 99999999999999865 8999999999876643
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.8e-10 Score=122.68 Aligned_cols=141 Identities=16% Similarity=0.206 Sum_probs=89.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++.... . . ++.+|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~--------------------------~----------~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--D--------------------------E----------EIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--H--------------------------H----------HHHHHH
Confidence 5799999999999997 47899999986542110 0 0 122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~ 273 (968)
..+.++.+. ..-+.+...+. ....+|||||++|.+|.++.... ....+...+...
T Consensus 66 ~~l~~l~~h----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 129 (286)
T cd06638 66 NILKALSDH----------------PNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYI 129 (286)
T ss_pred HHHHHHhcC----------------CCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHH
Confidence 444443210 00122222221 23458999999999998764311 112333333333
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 130 ~~~i~~~l~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 130 LHEALMGLQHLHVNKTIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 176 (286)
T ss_pred HHHHHHHHHHHHhCCccccCCCHHhEEECCC--CCEEEccCCceeeccc
Confidence 22222 678899999999999999999865 7899999999877643
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.9e-10 Score=139.58 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=92.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+-+|.||+|+||+|+..+|+.|||||++|-..-.+..=.+++.+|. ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-----------------------------~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-----------------------------PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-----------------------------hhhhc
Confidence 5789999999999998889999999999876533322222221111 00001
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (968)
....+...+ + ..+..+||+||.+=++|-|+.. .....+...++-..++++ +++
T Consensus 755 ~~~~~~~a~-----------------------~-~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~ 809 (974)
T KOG1166|consen 755 SIMHISSAH-----------------------V-FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEH 809 (974)
T ss_pred chHHHHHHH-----------------------c-cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHH
Confidence 111111111 0 1455689999999888887743 223344444555555544 899
Q ss_pred HHhcCccccCCCCCceEEecC-----CCCceEEEeccccccc
Q 002092 282 IYVDGFFNGDPHPGNFLVSKD-----PPHRPILLDFGLTKKL 318 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~-----~~g~i~LiDFG~~~~l 318 (968)
+|..||||+||||.|+|++.. +..-|.|||||.+-.+
T Consensus 810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred HHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999999999999999842 1245899999987654
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-10 Score=123.86 Aligned_cols=141 Identities=15% Similarity=0.142 Sum_probs=91.1
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|+.++++.|++|+.+....... . ++..|..
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~---------------------------~----------~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQ---------------------------Q----------DFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhH---------------------------H----------HHHHHHH
Confidence 56899999999999998899999998653321000 0 1222333
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l 279 (968)
.+..+.+ ..-+.+...+. ....++||||++|.+|.+...... ...+...+...+.+++ +
T Consensus 55 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al 117 (261)
T cd05148 55 ALKRLRH-----------------KHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGM 117 (261)
T ss_pred HHhcCCC-----------------cchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 3332211 00111111111 445689999999999887643211 1234444444444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 118 ~~lH~~~i~h~dl~~~nilv~~~--~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 118 AYLEEQNSIHRDLAARNILVGED--LVCKVADFGLARLIKE 156 (261)
T ss_pred HHHHHCCeeccccCcceEEEcCC--ceEEEccccchhhcCC
Confidence 78899999999999999999865 8899999999876643
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.7e-10 Score=124.98 Aligned_cols=80 Identities=19% Similarity=0.161 Sum_probs=58.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.....++|||+++++|.+.............+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 80 ~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~--~~~kL~Dfg~~~ 157 (303)
T cd05110 80 SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLAR 157 (303)
T ss_pred CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC--CceEEccccccc
Confidence 4456799999999888776432222234444444333333 678899999999999999999865 789999999998
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 158 ~~~~ 161 (303)
T cd05110 158 LLEG 161 (303)
T ss_pred cccC
Confidence 7653
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.9e-10 Score=121.44 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=56.9
Q ss_pred CeEEecccCCCCCCCHHHHHh-----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccc
Q 002092 242 TVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (968)
.+++|||++|.+|........ ..++...+...+.++. +..+|..|++|+|+||.||+++++ ++++|+|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED--MTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC--CeEEECCccc
Confidence 589999999998876643221 1234444444444433 678899999999999999999865 8999999999
Q ss_pred ccccC
Q 002092 315 TKKLS 319 (968)
Q Consensus 315 ~~~l~ 319 (968)
++.+.
T Consensus 160 ~~~~~ 164 (273)
T cd05035 160 SKKIY 164 (273)
T ss_pred eeecc
Confidence 88664
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.4e-10 Score=122.73 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+.+ +|+.||||+.+....... . -.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------------------~----------~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT--------------------------P----------STAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc--------------------------h----------HHHHHHH
Confidence 57999999999999985 799999998764321100 0 0122355
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh--cCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~ 276 (968)
..+.++.+ + .+++++. ....+|||||++| ++.+...... ..++...+...+.+
T Consensus 50 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 50 SLMKELKH------------------E--NIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHhhcC------------------C--CEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 55555432 1 1333332 4567999999997 5544432111 22455555444444
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~--~~~~l~d~g~~~~~~ 151 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLINKR--GELKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEECCC--CcEEEeecchhhhhc
Confidence 43 678899999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.2e-10 Score=131.26 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=87.0
Q ss_pred ccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||.|++|.||+|+.+ .++.||||+...+. .+.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------------------------------------------~~~~ 135 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------------------------------------------TPGR 135 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc------------------------------------------cHHH
Confidence 57999999999999863 46889999764321 1123
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
|.+.+.++.+. .-+.+-..+. ....++|||++.| .|.+... ....+....+...+.+++
T Consensus 136 E~~il~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 136 EIDILKTISHR-----------------AIINLIHAYRWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLE 196 (392)
T ss_pred HHHHHHhcCCC-----------------CccceeeeEeeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 44444443220 0111222222 4556899999975 3433321 122345555555444444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 197 aL~~LH~~givHrDlkp~Nill~~~--~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 197 ALAYLHGRGIIHRDVKTENIFLDEP--ENAVLGDFGAACKLDA 237 (392)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEccCccccccCc
Confidence 788999999999999999999865 8999999999876643
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.5e-10 Score=123.04 Aligned_cols=148 Identities=18% Similarity=0.205 Sum_probs=99.0
Q ss_pred ccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
..+.|... +.+++|++|+||+|..+ +++.|++|+.+.... +.
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~------------------------------ 59 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NK------------------------------ 59 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hH------------------------------
Confidence 44444333 57999999999999985 799999998765432 00
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
-.+..|...+.++.+ ..-+.+...+. ....+++|||++|.+|.++.......++...+.
T Consensus 60 ---~~~~~e~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 119 (286)
T cd06614 60 ---ELIINEILIMKDCKH-----------------PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIA 119 (286)
T ss_pred ---HHHHHHHHHHHHCCC-----------------CCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHH
Confidence 012233333333321 11123333332 566789999999999988754332145555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 120 YVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD--GSVKLADFGFAAQLTK 168 (286)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC--CCEEECccchhhhhcc
Confidence 5444444 678899999999999999999865 8999999998776544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.1e-10 Score=122.52 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|++|++|.||+|+. .+|+.||||+..+.-.. . . .+..|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~--------------------------~----------~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--D--------------------------E----------EIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--H--------------------------H----------HHHHHH
Confidence 5799999999999997 47999999987542100 0 0 012233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~ 273 (968)
..+.++.+. ..-+.+-..+. ....++||||++|.+|.++... .........+...
T Consensus 70 ~~l~~l~~h----------------~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~ 133 (291)
T cd06639 70 NILQSLPNH----------------PNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYI 133 (291)
T ss_pred HHHHHhcCC----------------CCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHH
Confidence 333333110 01122222221 2346899999999999876431 1122344444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 134 ~~qi~~al~~lH~~~ivH~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 134 LYGALLGLQHLHNNRIIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 180 (291)
T ss_pred HHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEeecccchhccc
Confidence 44433 678899999999999999999865 8899999999876643
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.4e-10 Score=126.55 Aligned_cols=140 Identities=15% Similarity=0.283 Sum_probs=95.3
Q ss_pred cccccccceeEEEEEEeCC--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~--G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
...||+|+||+||.+...+ .+.+|+|+........- . .+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------------------------~-~l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------------------------S-VLKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------------------------c-cchh
Confidence 4689999999999999754 35899998764321100 0 1222
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-----CCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 274 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l 274 (968)
|...+..+... .....+|.++.. ..+++||+.+ |.+|.++..... ..++...++...
T Consensus 66 E~~vl~~l~~~----------------~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 66 EIQVLKKLEKK----------------NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIA 128 (322)
T ss_pred HHHHHHHHhhh----------------cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHH
Confidence 33333333320 112356666652 2469999988 888888653332 346667777777
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCC-C--CceEEEeccccc
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-P--HRPILLDFGLTK 316 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~--g~i~LiDFG~~~ 316 (968)
++.+ ++.+|..|++|||+||+|+++.... . ..+.|+|||+++
T Consensus 129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7766 8999999999999999999998542 1 468999999999
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.4e-10 Score=123.58 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=93.6
Q ss_pred CccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
.+.+.|... +.||+|++|.||+|+.+ +|+.||||+........ .+.
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----------------------------~~~--- 58 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----------------------------NEK--- 58 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----------------------------HHH---
Confidence 444555443 46999999999999974 79999999864321100 000
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (968)
.-++.+|...+.++.+ ...+.+...+. ....+|||||++|. +.+.............+
T Consensus 59 ---~~~~~~Ei~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~ 117 (307)
T cd06607 59 ---WQDIIKEVRFLQQLRH-----------------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEI 117 (307)
T ss_pred ---HHHHHHHHHHHHhCCC-----------------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHH
Confidence 0112344444444321 11233333333 45678999999873 33332222223444444
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++...+
T Consensus 118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~--~~~kL~dfg~~~~~~ 166 (307)
T cd06607 118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTEP--GTVKLADFGSASLVS 166 (307)
T ss_pred HHHHHHHHHHHHHHHHCCceecCCCcccEEECCC--CCEEEeecCcceecC
Confidence 44433333 678899999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.08 E-value=4e-10 Score=126.17 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=92.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.. +|+.||||+..+.....- .. . -.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------~------~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NK---------------------------V------KRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HH---------------------------H------HHHHHHH
Confidence 57999999999999975 699999998764321100 00 0 0123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (968)
+.+.++.+ ..|++++. ....+++|||+.|.+|.++..... ..++...+...+.++
T Consensus 53 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 53 EILATLDH--------------------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHhCCC--------------------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 44443321 12333332 455689999999999987643211 224444443333333
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 113 LLALEYLHLLGIVYRDLKPENILLHES--GHIMLSDFDLSKQSDV 155 (316)
T ss_pred HHHHHHHHHCCeeccCCChHHeEEcCC--CCEEEeecchhhcccc
Confidence 3 677899999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.4e-11 Score=142.81 Aligned_cols=76 Identities=21% Similarity=0.259 Sum_probs=56.4
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH-HHH--HHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE-ITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~-l~~--~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
...||||||++|+.|-.+. ...+.-+..+++- +++ +.+..||.-|+||||+||.|||++.. |.|+|.|||.|-
T Consensus 148 ~~LYlVMdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~--GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS--GHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc--CcEeeccchhHH
Confidence 4457999999999887663 3333122333322 222 22788999999999999999999976 999999999988
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 224 km~ 226 (1317)
T KOG0612|consen 224 KMD 226 (1317)
T ss_pred hcC
Confidence 776
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.9e-10 Score=108.06 Aligned_cols=131 Identities=19% Similarity=0.281 Sum_probs=90.8
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
++++.|+++.||+++.. +..++||+.++... +.++..|..
T Consensus 4 ~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---------------------------------------~~~~~~e~~ 43 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---------------------------------------GADREREVA 43 (155)
T ss_pred eecccccccceEEEEec-CCeEEEEecCCCCc---------------------------------------hhHHHHHHH
Confidence 57999999999999974 48899998765422 113455666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l 279 (968)
.+..+++. ...+|+++. .+..+++|||++|.++... .. .....+...+.+. +
T Consensus 44 ~~~~l~~~------------------~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-~~----~~~~~~~~~~~~~-l 99 (155)
T cd05120 44 ILQLLARK------------------GLPVPKVLASGESDGWSYLLMEWIEGETLDEV-SE----EEKEDIAEQLAEL-L 99 (155)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCccEEEEEecCCeecccC-CH----HHHHHHHHHHHHH-H
Confidence 66666552 245666664 2458999999999888753 00 0112233333333 5
Q ss_pred HHHHh---cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYV---DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~---~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|. .|++|+|+||+||+++.+ +.++++|||.+...++
T Consensus 100 ~~lh~~~~~~i~H~Dl~~~Nil~~~~--~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 100 AKLHQLPLLVLCHGDLHPGNILVDDG--KILGIIDWEYAGYGPP 141 (155)
T ss_pred HHHhCCCceEEEecCCCcceEEEECC--cEEEEEecccccCCCh
Confidence 55665 489999999999999864 7899999999886553
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.4e-10 Score=123.91 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=57.2
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhc----------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAF----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~----------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (968)
....+++|||++|.+|.++...... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC--CC
Confidence 4567899999999998776432110 122233444333333 678899999999999999999865 88
Q ss_pred eEEEecccccccC
Q 002092 307 PILLDFGLTKKLS 319 (968)
Q Consensus 307 i~LiDFG~~~~l~ 319 (968)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05095 169 IKIADFGMSRNLY 181 (296)
T ss_pred EEeccCccccccc
Confidence 9999999987653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.5e-10 Score=120.18 Aligned_cols=142 Identities=18% Similarity=0.141 Sum_probs=92.8
Q ss_pred ccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
||.|++|.||+|+.. +|+.||||+..+..... .+ .+-.+.+|.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------~~------~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE----------------------------TG------QQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh----------------------------hh------HHHHHHHHHHH
Confidence 689999999999974 69999999876421100 00 01123345444
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (968)
+.++.+ ..-+.+...+. ....+++|||++|.+|.+...- ........+...+.+++ +..
T Consensus 47 l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~ 108 (262)
T cd05572 47 LEECNH-----------------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEY 108 (262)
T ss_pred HHhCCC-----------------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Confidence 444321 01112222222 4567899999999999876432 12344444444433333 688
Q ss_pred HHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+|..|++|+|+||.||+++.+ +.++|+|||.+..+...
T Consensus 109 lH~~~~~h~dl~~~nilv~~~--~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 109 LHNRGIIYRDLKPENLLLDSN--GYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HhhCCcccCCCCHHHEEEcCC--CCEEEeeCCcccccCcc
Confidence 999999999999999999865 89999999999887654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-10 Score=122.96 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=57.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
....++++||+++.+|.+...... ...+...+...+.++. +..+|..|++|+|+||.||++++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 355689999999988877643211 1123333333333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002092 302 DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +.++|+|||+++.+..
T Consensus 160 ~--~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 160 K--LNVKISDLGLFREVYA 176 (283)
T ss_pred C--CceEeccccccccccc
Confidence 5 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.3e-10 Score=120.00 Aligned_cols=141 Identities=18% Similarity=0.187 Sum_probs=96.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.|+||+.++....... -++.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~------------------------------------~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFR------------------------------------KQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHH------------------------------------HHHHHHH
Confidence 68999999999999985 6999999987654321000 0133444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+...+. ....++||||++|.+|.+.... ...++...+...+.+++ +
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l 112 (264)
T cd06623 51 KTLRSCES-----------------PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK-VGKIPEPVLAYIARQILKGL 112 (264)
T ss_pred HHHHhcCC-----------------CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 44444431 01122222222 4567899999999999877532 23445555444444443 6
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|. .|++|+|+||.||+++.+ +.++|+|||.+..+..
T Consensus 113 ~~lh~~~~~~H~~l~~~ni~~~~~--~~~~l~df~~~~~~~~ 152 (264)
T cd06623 113 DYLHTKRHIIHRDIKPSNLLINSK--GEVKIADFGISKVLEN 152 (264)
T ss_pred HHHhccCCCccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 78999 999999999999999865 8999999999887643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.07 E-value=8e-10 Score=128.16 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.2
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||+++.+
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~--~~~kL~DfGla~~~ 289 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEG--KLVKICDFGLARDI 289 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCC--CEEEEEecCcceec
Confidence 677899999999999999999865 78999999998765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.1e-10 Score=121.84 Aligned_cols=77 Identities=16% Similarity=0.218 Sum_probs=56.4
Q ss_pred CCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
..+++|||++|.+|.++...... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~--~~~~l~dfg~~~~ 170 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCcchhh
Confidence 34799999999999876543221 233333333333322 678899999999999999999865 8899999999876
Q ss_pred cC
Q 002092 318 LS 319 (968)
Q Consensus 318 l~ 319 (968)
+.
T Consensus 171 ~~ 172 (282)
T cd06636 171 LD 172 (282)
T ss_pred hh
Confidence 53
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.06 E-value=4e-10 Score=124.88 Aligned_cols=145 Identities=20% Similarity=0.223 Sum_probs=91.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|..+ +|++||||..+......-. ++. +..+..|.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~--------------------------~~~------~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK--------------------------DGI------NFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccccc--------------------------chh------hHHHHHHH
Confidence 46999999999999974 7999999987654321000 000 00122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....++||||+ +.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 54 KLLQELKH-----------------PNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHhhcCC-----------------CCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 00112222222 34568999999 7777665332111355555555444444 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIASD--GVLKLADFGLARSFGS 154 (298)
T ss_pred HHHHhCCeeecCCChhhEEEcCC--CCEEEccceeeeeccC
Confidence 78899999999999999999965 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.8e-10 Score=124.94 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=96.0
Q ss_pred hCCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHH
Q 002092 110 FGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (968)
Q Consensus 110 lg~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (968)
++.+++++|..+. .||.|++|.||+|+. .+|+.|+||+......... +.
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~---------------------------~~- 64 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN---------------------------EK- 64 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCch---------------------------HH-
Confidence 3456777766555 499999999999997 4789999998753211000 00
Q ss_pred HHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCH
Q 002092 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (968)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (968)
..++..|.+.+.++++ ..-+.+..++. ....++||||+.| ++.+........++.
T Consensus 65 ------~~~~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~ 120 (313)
T cd06633 65 ------WQDIIKEVKFLQQLKH-----------------PNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQE 120 (313)
T ss_pred ------HHHHHHHHHHHHhCCC-----------------CCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCH
Confidence 0012334444444422 11122333332 4556899999976 444433222233444
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 121 ~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~--~~~kL~dfg~~~~~ 171 (313)
T cd06633 121 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC--CCEEEeecCCCccc
Confidence 44444443433 678899999999999999999865 88999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-09 Score=118.65 Aligned_cols=76 Identities=21% Similarity=0.281 Sum_probs=56.9
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...+++|||++|.+|.+...-. ..++...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 66 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~--~~~~l~dfg~~~~ 142 (265)
T cd05579 66 KNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN--GHLKLTDFGLSKV 142 (265)
T ss_pred cEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC--CCEEEEecccchh
Confidence 4468999999999987764321 2344444444444433 678899999999999999999965 8999999998765
Q ss_pred c
Q 002092 318 L 318 (968)
Q Consensus 318 l 318 (968)
.
T Consensus 143 ~ 143 (265)
T cd05579 143 G 143 (265)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.9e-10 Score=122.73 Aligned_cols=140 Identities=17% Similarity=0.173 Sum_probs=88.1
Q ss_pred ccccccceeEEEEEEeC-CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~--~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||.|++|+||+|+++ +|. .|++|+.+....... .-+|.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~~~ 51 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND------------------------------------HRDFAG 51 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHH------------------------------------HHHHHH
Confidence 57999999999999975 454 478886553211110 012344
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh---------------cC
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------------FG 264 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------------~~ 264 (968)
|...+.++.+. ..-+.+...+. ....+++|||+++.+|.++..... ..
T Consensus 52 E~~~l~~l~~h----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (297)
T cd05089 52 ELEVLCKLGHH----------------PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAST 115 (297)
T ss_pred HHHHHHhhcCC----------------CchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCC
Confidence 55555554210 00111222222 455789999999998877643211 01
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 116 l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~ 168 (297)
T cd05089 116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--LASKIADFGLSRG 168 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC--CeEEECCcCCCcc
Confidence 33334444444433 688999999999999999999865 8899999998753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.5e-10 Score=121.63 Aligned_cols=80 Identities=18% Similarity=0.263 Sum_probs=61.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+..... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+.
T Consensus 72 ~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~l~d~~~~~ 148 (258)
T cd05578 72 EENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ--GHVHITDFNIAT 148 (258)
T ss_pred CCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC--CCEEEeeccccc
Confidence 34568999999999998764322 2455555555555544 778899999999999999999865 899999999987
Q ss_pred ccCHH
Q 002092 317 KLSSS 321 (968)
Q Consensus 317 ~l~~~ 321 (968)
.+...
T Consensus 149 ~~~~~ 153 (258)
T cd05578 149 KVTPD 153 (258)
T ss_pred ccCCC
Confidence 76543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=8e-10 Score=130.30 Aligned_cols=77 Identities=18% Similarity=0.255 Sum_probs=53.8
Q ss_pred CCCeEEecccCCCCCCCHHHHHhc-----------------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCC
Q 002092 240 SETVLILEFMDGIRLNDCESLEAF-----------------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHP 294 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~-----------------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hP 294 (968)
...+|||||+++.+|.++...... ..+...+...+.++. +..+|..|++|||+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456899999999998776431100 011112222222222 6778999999999999
Q ss_pred CceEEecCCCCceEEEeccccccc
Q 002092 295 GNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 295 gNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+||+++.+ +.++|+|||++..+
T Consensus 338 ~NILl~~~--~~~kL~DFGla~~~ 359 (507)
T PLN03224 338 ENLLVTVD--GQVKIIDFGAAVDM 359 (507)
T ss_pred HhEEECCC--CcEEEEeCcCcccc
Confidence 99999865 88999999998654
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.1e-10 Score=120.31 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=91.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++|++|++|.||+|..+ +++.|++|+........ -++.+|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--------------------------------------EEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--------------------------------------HHHHHHH
Confidence 68999999999999974 78999999876532210 0123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHh---cCCCHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVE 272 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~ 272 (968)
..+.++.+. ..-+.+...+. ....++||||++|.+|.++..... ..++...+..
T Consensus 54 ~~l~~~~~h----------------~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 117 (275)
T cd06608 54 NILRKYSNH----------------PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAY 117 (275)
T ss_pred HHHHHhcCC----------------CChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHH
Confidence 444443210 00112222221 122579999999999987654222 2344444443
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~--~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 118 ILRETLRGLAYLHENKVIHRDIKGQNILLTKN--AEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCHHHEEEccC--CeEEECCCccceeccc
Confidence 333333 678899999999999999999865 8899999999876643
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.6e-10 Score=121.37 Aligned_cols=147 Identities=15% Similarity=0.109 Sum_probs=94.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+. .+|+.||||+.+........ +.+ ..-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~-~~~------------------------------~~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE-QEE------------------------------VVEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh-HHH------------------------------HHHHHHHHH
Confidence 5689999999999986 68999999987643211100 000 001233455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++. .-+.+...+. ....++||||++|.+|.++... ....+...+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al 116 (268)
T cd06630 55 RLMARLNHP-----------------HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGL 116 (268)
T ss_pred HHHHHcCCC-----------------ceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHH
Confidence 555554320 0111222222 3556899999999999876432 22344444444333333 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 117 ~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 117 SYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAA 156 (268)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC-CCEEEEccccccccccc
Confidence 78899999999999999999754 23689999999887754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.4e-10 Score=119.71 Aligned_cols=142 Identities=16% Similarity=0.208 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|.. .+|+.|+||+........ +.. ++.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~---------------------------------~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD---------------------------------ELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH---------------------------------HHHHHH
Confidence 5799999999999996 478999999875321111 100 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--cCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (968)
..+..+.+ ...+.+...+. ....+++||+++|.+|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~ 113 (267)
T cd06610 51 QAMSQCNH-----------------PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLK 113 (267)
T ss_pred HHHHhcCC-----------------CCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 43333321 11122222222 456789999999999887754221 2344444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 114 al~~lh~~~i~h~~l~p~ni~~~~~--~~~~l~df~~~~~~~~ 154 (267)
T cd06610 114 GLEYLHSNGQIHRDIKAGNILLGED--GSVKIADFGVSASLAD 154 (267)
T ss_pred HHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccchHHHhcc
Confidence 678899999999999999999865 8899999999877654
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.2e-10 Score=123.51 Aligned_cols=143 Identities=15% Similarity=0.071 Sum_probs=93.4
Q ss_pred cccccccceeEEEEEEe------CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 123 ETPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l------~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
.+.||.|++|+||+|+. .++..||||+.+........ -
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER------------------------------------E 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH------------------------------------H
Confidence 36899999999999974 14568999987644321100 0
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEI 274 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l 274 (968)
.+.+|.+.+.++.+. ..-+.+...+. ....+|||||+.|.+|.+....... ..+...+....
T Consensus 84 ~~~~E~~~l~~l~~h----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~ 147 (302)
T cd05055 84 ALMSELKIMSHLGNH----------------ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS 147 (302)
T ss_pred HHHHHHHHHHhccCC----------------CCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHH
Confidence 234455555554210 01122222222 4567899999999998876432111 14555555544
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 148 ~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 192 (302)
T cd05055 148 YQVAKGMAFLASKNCIHRDLAARNVLLTHG--KIVKICDFGLARDIM 192 (302)
T ss_pred HHHHHHHHHHHHCCeehhhhccceEEEcCC--CeEEECCCccccccc
Confidence 4433 678899999999999999999855 789999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.8e-10 Score=121.55 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=59.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh----------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~----------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (968)
....+++|||++|.+|.+...... ...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC--Cc
Confidence 466789999999998877643211 0244555555544444 678899999999999999999866 89
Q ss_pred eEEEecccccccC
Q 002092 307 PILLDFGLTKKLS 319 (968)
Q Consensus 307 i~LiDFG~~~~l~ 319 (968)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05051 169 IKIADFGMSRNLY 181 (296)
T ss_pred eEEccccceeecc
Confidence 9999999987653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.2e-10 Score=127.55 Aligned_cols=74 Identities=22% Similarity=0.446 Sum_probs=54.1
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++||||++| ++.+.. . ...+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 95 ~~~lv~e~~~~-~l~~~~--~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 168 (353)
T cd07850 95 DVYLVMELMDA-NLCQVI--Q-MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 168 (353)
T ss_pred cEEEEEeccCC-CHHHHH--h-hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCccceeC
Confidence 35899999986 444332 1 1245444444444433 788999999999999999999865 89999999998866
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 169 ~~ 170 (353)
T cd07850 169 GT 170 (353)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.9e-10 Score=123.36 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=56.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHH--hcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCceEEecCCCCceEEEecc
Q 002092 239 SSETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
....++||||++|.+|..+.... ...++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg 148 (286)
T cd06622 71 EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN--GQVKLCDFG 148 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC--CCEEEeecC
Confidence 34567999999999987653321 11344444444444433 567775 699999999999999865 899999999
Q ss_pred cccccC
Q 002092 314 LTKKLS 319 (968)
Q Consensus 314 ~~~~l~ 319 (968)
++..+.
T Consensus 149 ~~~~~~ 154 (286)
T cd06622 149 VSGNLV 154 (286)
T ss_pred Cccccc
Confidence 987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.2e-10 Score=123.09 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=93.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||..+...... . ....+.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-----------------------------G------FPITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-----------------------------c------chhhHHHHH
Confidence 67999999999999975 78999999765332110 0 001223344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++++ ..-+.+...+. . ...+|||||++| +|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~h-----------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~ 117 (293)
T cd07843 56 NILLKLQH-----------------PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLS 117 (293)
T ss_pred HHHHhcCC-----------------CCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 44444432 01122222222 3 567999999986 66555332222355555555555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 aL~~LH~~~i~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 118 GVAHLHDNWILHRDLKTSNLLLNNR--GILKICDFGLAREYGS 158 (293)
T ss_pred HHHHHHHCCeeeccCCHHHEEECCC--CcEEEeecCceeeccC
Confidence 778999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.6e-10 Score=121.03 Aligned_cols=139 Identities=14% Similarity=0.168 Sum_probs=91.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.|+||+.+..... ..+. + .+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~---------------------------~------~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTI---------------------------K------EIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHH---------------------------H------HHHHHH
Confidence 6899999999999997 47999999997654321 0000 0 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+.++++ -.|.+++. ....++||||++|.+|.++.... .......+...+.+++
T Consensus 51 ~~~~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~ 109 (264)
T cd06626 51 KVLELLKH--------------------PNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLL 109 (264)
T ss_pred HHHHhCCC--------------------CChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHH
Confidence 33333321 01122221 45568999999999998874321 1233333333333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+..
T Consensus 110 ~~l~~lh~~~i~H~dl~~~nil~~~~--~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 110 EGLAYLHSHGIVHRDIKPANIFLDHN--GVIKLGDFGCAVKLKN 151 (264)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEEcccccccccCC
Confidence 678899999999999999999865 8999999999887654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-09 Score=119.15 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=88.0
Q ss_pred cccccceeEEEEEEeC-CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 125 PLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 125 plgsaSigqV~~A~l~-~G~--~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.||.|++|.||+|+++ +|. .|++|..+........ -++.+|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------------------~~~~~E 45 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------------------------------------RDFAGE 45 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH------------------------------------HHHHHH
Confidence 5899999999999985 555 4677865532211100 123445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHh---------------cC
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------------FG 264 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------------~~ 264 (968)
...+.++.+ ++. +.+-..+. .+..++||||++|.+|.+...... ..
T Consensus 46 ~~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (270)
T cd05047 46 LEVLCKLGH-----------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 108 (270)
T ss_pred HHHHHhhcc-----------------CCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCC
Confidence 555555432 111 22222222 455789999999998877643211 01
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 109 l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~--~~~kl~dfgl~~~ 161 (270)
T cd05047 109 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRG 161 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC--CeEEECCCCCccc
Confidence 23344444444433 678899999999999999999865 8899999998753
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.7e-10 Score=121.29 Aligned_cols=138 Identities=22% Similarity=0.216 Sum_probs=91.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.|+||+.+-..... .+ .+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------RE------LLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------HH------HHHHHH
Confidence 5899999999999996 578999999753111000 00 022333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....+++|||++|.+|.+... ....+...+...+.+++ +
T Consensus 68 ~~l~~~~h-----------------~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 128 (285)
T cd06648 68 VIMRDYQH-----------------PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLAVLKAL 128 (285)
T ss_pred HHHHHcCC-----------------CChheEEEEEEcCCeEEEEEeccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHH
Confidence 33333211 11122222222 466789999999999987643 33455555555444444 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 129 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~d~g~~~~~~ 166 (285)
T cd06648 129 SFLHAQGVIHRDIKSDSILLTSD--GRVKLSDFGFCAQVS 166 (285)
T ss_pred HHHHhCCeecCCCChhhEEEcCC--CcEEEcccccchhhc
Confidence 78899999999999999999865 899999999876554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.3e-10 Score=122.66 Aligned_cols=143 Identities=16% Similarity=0.205 Sum_probs=92.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.. +|+.||||+.+...... + ...++..|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~-----------------------------~------~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE-----------------------------G------FPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc-----------------------------c------chHHHHHHH
Confidence 46899999999999975 68999999887543100 0 001233444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++.+ ..-+.+..++. . ...++||||+++ +|.+........++...+...+.++.
T Consensus 50 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~ 111 (287)
T cd07840 50 KLLQKLRH-----------------PNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLE 111 (287)
T ss_pred HHHHhccC-----------------CCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 44444431 00122222222 2 567899999986 55544321112345544444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 112 al~~LH~~~~~h~dl~p~nil~~~~--~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 112 GLQYLHSNGILHRDIKGSNILINND--GVLKLADFGLARPYTKR 153 (287)
T ss_pred HHHHHHHCCceeccCcHHHeEEcCC--CCEEEccccceeeccCC
Confidence 678899999999999999999965 89999999998877543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.8e-10 Score=121.00 Aligned_cols=139 Identities=19% Similarity=0.204 Sum_probs=88.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|.. .+|+.||+|+.......... . ++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVR------------------------------K------QILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHH------------------------------H------HHHHHH
Confidence 5789999999999997 47999999987643221110 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+..+.+ +. +.+-..+. ....+|||||++|.+|.+.... ...+....+.....++.
T Consensus 55 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 115 (284)
T cd06620 55 QIMHECRS------------------PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEG 115 (284)
T ss_pred HHHHHcCC------------------CCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHH
Confidence 44443321 11 11111111 4567899999999998776332 12233333333333222
Q ss_pred HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|. +|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 116 l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~d~gl~~~~~ 155 (284)
T cd06620 116 LTYLYNVHRIMHRDIKPSNILVNSR--GQIKLCDFGVSGELI 155 (284)
T ss_pred HHHHHHhcCeeccCCCHHHEEECCC--CcEEEccCCcccchh
Confidence 556775 699999999999999865 899999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.1e-10 Score=128.28 Aligned_cols=141 Identities=19% Similarity=0.178 Sum_probs=99.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|-||.||.+....+..||||..||+..+... -||+.|++
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r------------------------------------~~F~kEIk 587 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNAR------------------------------------NDFLKEIK 587 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhHH------------------------------------HHHHHHHH
Confidence 689999999999999877799999999998654322 14667888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCC-CHHHHHHHHHHHH--H
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGV-NKQKVVEEITRAY--A 279 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~-~~~~l~~~l~~~~--l 279 (968)
.+.++++ ...+.+--|.. .....++|||++.+.|.++........ +....+....+++ +
T Consensus 588 iLsqLkh-----------------PNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgm 650 (807)
T KOG1094|consen 588 ILSRLKH-----------------PNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGM 650 (807)
T ss_pred HHhccCC-----------------CCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHH
Confidence 8777642 11122222211 244579999999999888754322222 3333444444444 5
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+-..+|+|||+-+.|+||+.+ +++++.||||++.+-
T Consensus 651 aYLes~nfVHrd~a~rNcLv~~e--~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 651 AYLESLNFVHRDLATRNCLVDGE--FTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHhhchhhccccccceeecCc--ccEEecCcccccccc
Confidence 56667899999999999999955 999999999998653
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.04 E-value=5e-10 Score=121.86 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=94.6
Q ss_pred ccccccceeEEEEEEeC-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+-||.|+||.||+|+++ .+.+|+||+..+...... ..+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~------------------------------------~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE------------------------------------EEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH------------------------------------HHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc------------------------------------ceee
Confidence 45899999999999986 367899999865332110 1123
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 276 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~ 276 (968)
.+|++.+.++++ ..-+.+-.+.. .....+||||+++.+|.+..... ....+...+...+.+
T Consensus 49 ~~e~~~l~~l~h-----------------~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~ 111 (259)
T PF07714_consen 49 LNEIQILRKLRH-----------------PNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQ 111 (259)
T ss_dssp HHHHHHHHTHSB-----------------TTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHH
T ss_pred eecccccccccc-----------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 445555555522 11122222222 45578999999999998875433 235666666666665
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+. +..+|..+++|+|++|.||+++.+ +.++|.|||+....
T Consensus 112 i~~~l~~Lh~~~iiH~~l~~~nill~~~--~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 112 IAEALSYLHSNNIIHGNLSPSNILLDSN--GQVKLSDFGLSRPI 153 (259)
T ss_dssp HHHHHHHHHHTTEEEST-SGGGEEEETT--TEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccc--cccccccccccccc
Confidence 54 778999999999999999999965 89999999998876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.2e-10 Score=122.42 Aligned_cols=144 Identities=19% Similarity=0.171 Sum_probs=93.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+...... +.. -.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~~~------~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------DVK------KTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------cch------hHHHHHH
Confidence 57999999999999975 68999999765422100 000 0123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ...+.+..++. ....++||||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 52 KVLRQLRH-----------------ENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHhcCC-----------------CCeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 44444421 01122222222 455789999999866544321 223355555554444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+....
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~--~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSES--GVLKLCDFGFARALRARP 154 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCC--CCEEEEeeecccccCCCc
Confidence 78899999999999999999865 899999999988765543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.2e-10 Score=126.01 Aligned_cols=140 Identities=21% Similarity=0.247 Sum_probs=88.4
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.++||+|++|.||+|.. ++|+.||||+.......... +-.+.+|
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~E 66 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYRE 66 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-----------------------------------HHHHHHH
Confidence 36899999999999986 58999999987643211100 0012234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
...+.++++. .-+.+..++. ....+++++++ |.+|.++.. ...+....+...+
T Consensus 67 i~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~--~~~l~~~~~~~i~ 126 (345)
T cd07877 67 LRLLKHMKHE-----------------NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKLTDDHVQFLI 126 (345)
T ss_pred HHHHHHcCCC-----------------cccceeeeeeecccccccccEEEEehhc-ccCHHHHHh--cCCCCHHHHHHHH
Confidence 4444444321 0111222221 13357888887 656655432 2234444444433
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 127 ~qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kl~dfg~~~~~~ 171 (345)
T cd07877 127 YQILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTD 171 (345)
T ss_pred HHHHHHHHHHHHCCeeecCCChHHEEEcCC--CCEEEeccccccccc
Confidence 3333 678899999999999999999865 899999999987653
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=122.00 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=58.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
....+++|||++|.+|.++..... .......+...+.++. +..+|..|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 455789999999999987653211 1233344444333433 67889999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002092 302 DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (968)
+ ++++|+|||.++.+..
T Consensus 170 ~--~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 170 D--NVMKIADFGLARGVHD 186 (314)
T ss_pred C--CcEEEccccccccccc
Confidence 5 8999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.9e-10 Score=138.52 Aligned_cols=141 Identities=20% Similarity=0.195 Sum_probs=105.9
Q ss_pred ccccccceeEEEEEEeC--CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV--DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G~----~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||.|.||.||+|+.. +|. .||||.+++.... .++.+
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~------------------------------------~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE------------------------------------QEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCH------------------------------------HHHHH
Confidence 58999999999999974 454 4888876554221 24557
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH------hcCCCHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE------AFGVNKQKV 270 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~------~~~~~~~~l 270 (968)
|.+||..+..|.|- ..|..--|-. ....++++|||+|+.|..+++.. ...+...++
T Consensus 742 Fl~Ea~~m~~f~Hp-----------------Niv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dL 804 (1025)
T KOG1095|consen 742 FLKEALLMSKFDHP-----------------NIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDL 804 (1025)
T ss_pred HHHHHHHHhcCCCc-----------------ceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHH
Confidence 88999998887541 1122222222 67789999999999998876544 345667778
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+...+++. ++++.+.+||||||-..|.|++.. ..+++.||||++.+-
T Consensus 805 l~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~--r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 805 LAFALDVAKGMNYLESKHFVHRDLAARNCLLDER--RVVKIADFGLARDIY 853 (1025)
T ss_pred HHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc--CcEEEcccchhHhhh
Confidence 87777776 888899999999999999999965 789999999998543
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=120.45 Aligned_cols=142 Identities=20% Similarity=0.257 Sum_probs=91.5
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||.|++|.||+|..+ +...||+|+.+...... + ..+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~---~---------------------------------~~~ 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK---D---------------------------------LSD 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH---H---------------------------------HHH
Confidence 58999999999999864 23679999876532211 0 001
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (968)
+.+|...+.++.+. ..-+.+-.++. ....+++|||++|.+|.+......
T Consensus 62 ~~~E~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 125 (293)
T cd05053 62 LVSEMEMMKMIGKH----------------KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPP 125 (293)
T ss_pred HHHHHHHHHhhcCC----------------CCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccc
Confidence 33444444443210 11123333333 456789999999999877643210
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 126 ~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~ 183 (293)
T cd05053 126 EETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED--HVMKIADFGLARDIH 183 (293)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC--CeEEeCccccccccc
Confidence 1233334444444433 678899999999999999999865 899999999988664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.8e-10 Score=119.08 Aligned_cols=142 Identities=17% Similarity=0.114 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||.|++|+||.++. .+|+.|++|..... .... ..-++.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~~e 49 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK------------------------------------ERRDALNE 49 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh------------------------------------HHHHHHHH
Confidence 5799999999999986 57999999975321 1100 00013345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH-
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~- 278 (968)
.+.++++.+ ..-+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 50 ~~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08221 50 IVILSLLQH-----------------PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112 (256)
T ss_pred HHHHHhCCC-----------------CCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 555554421 11223333332 45668999999999998764422 12244444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 113 ~l~~lh~~~i~h~dl~p~ni~~~~~--~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 113 AVSYIHKAGILHRDIKTLNIFLTKA--GLIKLGDFGISKILGS 153 (256)
T ss_pred HHHHHHhCCccccCCChHhEEEeCC--CCEEECcCcceEEccc
Confidence 678899999999999999999865 8899999999876644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.9e-10 Score=121.16 Aligned_cols=140 Identities=18% Similarity=0.176 Sum_probs=89.6
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
..||.|++|+||+|+.+ ++..||||+.+.+...... -+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------------~~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHH------------------------------------HH
Confidence 57899999999999863 5788999987644321110 01
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (968)
+.+|...+.++.+ ..-+.+...+. ....+++|||++|.+|.+......
T Consensus 55 ~~~ei~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (288)
T cd05050 55 FQREAALMAEFDH-----------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSA 117 (288)
T ss_pred HHHHHHHHHhcCC-----------------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccc
Confidence 3334444443321 00122222222 345689999999998877643211
Q ss_pred -------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 263 -------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 263 -------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 118 ~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 180 (288)
T cd05050 118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNI 180 (288)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC--CceEECccccceec
Confidence 0122333334344433 678899999999999999999865 89999999997654
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.3e-10 Score=119.72 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=90.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-|++|++|.||+|+. .+|+.||||+.+......-. ..+. -.+.+|+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~-------------------------~~~~-------~~~~~E~ 55 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPET-------------------------SKEV-------NALECEI 55 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCccc-------------------------HHHH-------HHHHHHH
Confidence 5689999999999997 46999999986532111000 0000 0134455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec---CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+.+.++.+. .-+.+...+.. ...+++|||++|.+|.+.... ....+...+...+.++.
T Consensus 56 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~ 117 (265)
T cd06652 56 QLLKNLLHE-----------------RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILE 117 (265)
T ss_pred HHHHhcCCC-----------------CeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 555554320 01111111111 234689999999999876431 12234444333333333
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 118 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 118 GVSYLHSNMIVHRDIKGANILRDSV--GNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHhCCEecCCCCHHHEEecCC--CCEEECcCccccccc
Confidence 678899999999999999999865 899999999887653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.6e-10 Score=123.86 Aligned_cols=77 Identities=19% Similarity=0.259 Sum_probs=55.2
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|||||++| .+.+........++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||.+..+
T Consensus 90 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~ 166 (302)
T cd07864 90 AFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK--GQIKLADFGLARLY 166 (302)
T ss_pred cEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CcEEeCcccccccc
Confidence 46799999987 33332211112345555555444444 678899999999999999999865 89999999998876
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 167 ~~ 168 (302)
T cd07864 167 NS 168 (302)
T ss_pred cC
Confidence 54
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-09 Score=118.74 Aligned_cols=78 Identities=14% Similarity=0.220 Sum_probs=57.0
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+..+++|||+.|.+|.+.............+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~--~~~kl~dfg~~~~ 147 (262)
T cd05058 70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES--FTVKVADFGLARD 147 (262)
T ss_pred CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--CcEEECCcccccc
Confidence 446899999999998876432222233343333333333 678899999999999999999865 8899999999876
Q ss_pred cC
Q 002092 318 LS 319 (968)
Q Consensus 318 l~ 319 (968)
+.
T Consensus 148 ~~ 149 (262)
T cd05058 148 IY 149 (262)
T ss_pred cc
Confidence 54
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.5e-10 Score=121.39 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=54.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcC---CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFG---VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~---~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
....+|||||++|.+|.++....... .....+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~--~~~~l~Dfg 144 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD--LTVKVGDYG 144 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC--ccEEecccc
Confidence 34568999999999987764322111 12222222222222 677899999999999999999865 889999999
Q ss_pred cccc
Q 002092 314 LTKK 317 (968)
Q Consensus 314 ~~~~ 317 (968)
++..
T Consensus 145 ~~~~ 148 (268)
T cd05086 145 IGPS 148 (268)
T ss_pred cccc
Confidence 8754
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.8e-10 Score=120.59 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=90.9
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||.|++|.||+|..+ ++..||||+...+.... ....
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR------------------------------------ERIE 55 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH------------------------------------HHHH
Confidence 57999999999999874 24789999865432100 0112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc---------CCCH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---------GVNK 267 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~ 267 (968)
+.+|...+..+.+ ..-+.+-..+. ....++||||++|.+|.+....... ....
T Consensus 56 ~~~e~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 118 (277)
T cd05032 56 FLNEASVMKEFNC-----------------HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL 118 (277)
T ss_pred HHHHHHHHHhCCC-----------------CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCH
Confidence 3345444444321 11122222222 4667999999999998876432110 1233
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 119 ~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~--~~~kl~dfg~~~~~~ 170 (277)
T cd05032 119 QKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED--LTVKIGDFGMTRDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC--CCEEECCcccchhhc
Confidence 34444444433 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=118.25 Aligned_cols=77 Identities=18% Similarity=0.244 Sum_probs=57.7
Q ss_pred CeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHHH--HHHHH-----hcCccccCCCCCceEEecCCCCceEEEe
Q 002092 242 TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIY-----VDGFFNGDPHPGNFLVSKDPPHRPILLD 311 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~-----~~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (968)
.+++|||++|.+|.+..... ...++...+...+.+++ +..+| ..|++|+|+||+||+++.+ +.++|+|
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~--~~~kl~d 153 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN--NNVKLGD 153 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC--CCEEEec
Confidence 47999999999998765322 12344444444444433 67788 8899999999999999965 8999999
Q ss_pred cccccccCH
Q 002092 312 FGLTKKLSS 320 (968)
Q Consensus 312 FG~~~~l~~ 320 (968)
||++..+..
T Consensus 154 ~g~~~~~~~ 162 (265)
T cd08217 154 FGLAKILGH 162 (265)
T ss_pred ccccccccC
Confidence 999887754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=119.39 Aligned_cols=144 Identities=14% Similarity=0.102 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||+|+.......... . . ....+.+|.
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--~-----------------------~-------~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--S-----------------------K-------EVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--h-----------------------H-------HHHHHHHHH
Confidence 5799999999999997 47999999976432211000 0 0 001234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++++. .-+.+...+. ....+++|||++|.+|.+.... ....+...+...+.++.
T Consensus 56 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~ 117 (264)
T cd06653 56 QLLKNLRHD-----------------RIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQ 117 (264)
T ss_pred HHHHHcCCC-----------------CcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 555554320 0122222222 2335799999999998776431 12234333333333322
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+.
T Consensus 118 al~~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 157 (264)
T cd06653 118 GVSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRIQ 157 (264)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCC--CCEEECccccccccc
Confidence 678899999999999999999865 889999999988653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=119.10 Aligned_cols=140 Identities=18% Similarity=0.183 Sum_probs=93.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.. +|+.||||+....... .+ . .++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~-----------------------~----------~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE---DE-----------------------I----------EDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc---hH-----------------------H----------HHHHHHH
Confidence 57899999999999974 7899999986422100 00 0 0123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+..+.+ +. +.+-..+. ....++||||++|.+|.+... ....+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~ 110 (274)
T cd06609 51 QFLSQCRS------------------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLG 110 (274)
T ss_pred HHHHHcCC------------------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh--hcCCCHHHHHHHHHHHHHH
Confidence 44443321 11 11112222 456789999999999877643 22455555555444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 111 l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 111 LEYLHEEGKIHRDIKAANILLSEE--GDVKLADFGVSGQLTST 151 (274)
T ss_pred HHHHHhCCcccCCCCHHHEEECCC--CCEEEcccccceeeccc
Confidence 567899999999999999999865 89999999999887653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.8e-10 Score=114.47 Aligned_cols=50 Identities=20% Similarity=0.358 Sum_probs=42.0
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 330 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~ 330 (968)
++.+|..||.|||+||||+||..+ .-++|+|||+++.-..+++..+..=+
T Consensus 169 LKYLHsA~ILHRDIKPGNLLVNSN--CvLKICDFGLARvee~d~~~hMTqEV 218 (449)
T KOG0664|consen 169 LKYLHTANILHRDIKPGNLLVNSN--CILKICDFGLARTWDQRDRLNMTHEV 218 (449)
T ss_pred hHHHhhcchhhccCCCccEEeccC--ceEEecccccccccchhhhhhhHHHH
Confidence 678899999999999999999865 77899999999988777776654433
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=117.02 Aligned_cols=143 Identities=18% Similarity=0.138 Sum_probs=94.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|+.|++|.||+|+.. +|+.|+||+.+...... .. . + .+.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~-----------------------~----~------~~~~e~ 50 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--EE-----------------------L----E------ALEREI 50 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch--HH-----------------------H----H------HHHHHH
Confidence 67999999999999985 79999999876432210 00 0 0 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++.+ ..-+.+..... . ...+++|||++|.+|.+..... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~ 112 (260)
T cd06606 51 RILSSLQH-----------------PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILE 112 (260)
T ss_pred HHHHHcCC-----------------CCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 34333321 00111222222 2 4568999999999998774422 2445555444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+......
T Consensus 113 ~l~~lh~~~~~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 113 GLAYLHSNGIVHRDIKGANILVDSD--GVVKLADFGCAKRLGDI 154 (260)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEcccccEEecccc
Confidence 678899999999999999999965 89999999998877654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-09 Score=119.52 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=91.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|..+ +++.||+|+......... +-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDL------------------------------------QKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHH------------------------------------HHHHHHHH
Confidence 57999999999999984 789999998764321100 11133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHH-H--hcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~-~--~~~~~~~~l~~~l~~ 276 (968)
+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.+.... . ........+...+.+
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~ 113 (287)
T cd06621 51 EINKSCKS-----------------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAES 113 (287)
T ss_pred HHHHhCCC-----------------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 55444422 01122222222 2346899999999998775331 1 112333443344433
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 i~~~L~~lH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 156 (287)
T cd06621 114 VLKGLSYLHSRKIIHRDIKPSNILLTRK--GQVKLCDFGVSGELV 156 (287)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEecC--CeEEEeecccccccc
Confidence 33 667899999999999999999865 789999999987654
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.3e-10 Score=122.95 Aligned_cols=79 Identities=25% Similarity=0.383 Sum_probs=59.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|..+.++.. .....+...+...+.++. +..+|..|++|+|++|.||+++++ +.++|+|||++.
T Consensus 72 ~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~--~~~~l~dfg~~~ 148 (286)
T cd07846 72 KKRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFAR 148 (286)
T ss_pred CCeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC--CcEEEEeeeeee
Confidence 345689999999987766532 122355555555555544 678899999999999999999865 899999999987
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 149 ~~~~ 152 (286)
T cd07846 149 TLAA 152 (286)
T ss_pred eccC
Confidence 6643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.5e-10 Score=124.68 Aligned_cols=152 Identities=13% Similarity=0.122 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.........+. .+.......+.++.+|.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~E~ 71 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKD-----------------------RQLVGMCGIHFTTLREL 71 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccc-----------------------hhhhcccccchhHHHHH
Confidence 47999999999999974 7999999987543211100000 00000001122344565
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+. .-+.+...+. ....++||||++| +|.+... .........+...+.+++ +
T Consensus 72 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~~~~~~~~~~~~ql~~aL 132 (335)
T PTZ00024 72 KIMNEIKHE-----------------NIMGLVDVYVEGDFINLVMDIMAS-DLKKVVD-RKIRLTESQVKCILLQILNGL 132 (335)
T ss_pred HHHHhCCCc-----------------ceeeeeEEEecCCcEEEEEecccc-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 555554320 1122223332 4556899999986 5554432 122344445444444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 133 ~~LH~~~i~H~dl~~~nill~~~--~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 133 NVLHKWYFMHRDLSPANIFINSK--GICKIADFGLARRYG 170 (335)
T ss_pred HHHHhCCeecccccHHHeEECCC--CCEEECCccceeecc
Confidence 78899999999999999999865 889999999987654
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.5e-10 Score=122.77 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=89.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++||+|++|+||+|+.+ +|+.||||+.+...... . .+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------------------------~----------~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-------------------------G----------VPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-------------------------c----------cchHHHHHH
Confidence 57999999999999974 79999999765322100 0 001233455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++++- .-+.+-..+. ....++||||+.+ +|.+..... ...++...+...+.+++
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~ 112 (284)
T cd07860 51 SLLKELNHP-----------------NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG 112 (284)
T ss_pred HHHHhcCCC-----------------CCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 554444220 0111111122 4556899999975 554442211 12344555544444443
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 l~~lh~~~i~H~~l~p~nill~~~--~~~~l~dfg~~~~~~ 151 (284)
T cd07860 113 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAFG 151 (284)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEEeeccchhhcc
Confidence 678899999999999999999865 899999999876553
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=120.22 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=57.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh-----------------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCC
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA-----------------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPH 293 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-----------------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~h 293 (968)
....+++|||++|.+|.+...... ..++...+...+.+++ +..+|..|++|+|+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 566799999999999877643110 0123334444444433 678999999999999
Q ss_pred CCceEEecCCCCceEEEecccccccC
Q 002092 294 PGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 294 PgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
|.||+++++ +.++|+|||++..+.
T Consensus 155 p~nill~~~--~~~kl~dfg~~~~~~ 178 (290)
T cd05045 155 ARNVLVAEG--RKMKISDFGLSRDVY 178 (290)
T ss_pred hheEEEcCC--CcEEecccccccccc
Confidence 999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=120.21 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=59.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCC
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP 304 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~ 304 (968)
....++||||++|.+|.+...... ..++...+...+.++. +..+|..|++|+|++|.||+++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~-- 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN-- 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--
Confidence 566789999999999876643111 1244444444444443 678899999999999999999865
Q ss_pred CceEEEecccccccC
Q 002092 305 HRPILLDFGLTKKLS 319 (968)
Q Consensus 305 g~i~LiDFG~~~~l~ 319 (968)
+.++|+|||++..+.
T Consensus 157 ~~~kl~dfg~~~~~~ 171 (288)
T cd05093 157 LLVKIGDFGMSRDVY 171 (288)
T ss_pred CcEEeccCCcccccc
Confidence 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=115.15 Aligned_cols=143 Identities=20% Similarity=0.197 Sum_probs=94.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++|++|++|+||+++.. +++.|+||+.+...... .. -++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~---------------------------------~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---QR---------------------------------EEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---HH---------------------------------HHHHHHH
Confidence 58999999999999986 48999999877543220 00 0223344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ...+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 49 ~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 111 (225)
T smart00221 49 RILKKLKH-----------------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEAL 111 (225)
T ss_pred HHHHhCCC-----------------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 44443311 00111111111 4667899999999988876442221144444444444433 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 112 ~~lh~~~i~h~di~~~ni~v~~~--~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 112 EYLHSLGIVHRDLKPENILLGMD--GLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC--CCEEEeeCceeeEecCc
Confidence 77899999999999999999865 89999999998877554
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.9e-10 Score=122.17 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=89.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+.+ +|+.||||+........ + ....+.+|.
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~--------------------------------~~~~~~~e~ 62 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---G--------------------------------FPITALREI 62 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---C--------------------------------chhHHHHHH
Confidence 57999999999999974 79999999764321100 0 000122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
+.+.++.+. .-+.+..++. ....++||||+.+ ++.+........++...+...
T Consensus 63 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i 124 (310)
T cd07865 63 KILQLLKHE-----------------NVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKV 124 (310)
T ss_pred HHHHhCCCC-----------------CccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHH
Confidence 444444220 0122222211 2334899999976 444332211123455555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|.+|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 125 ~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 125 MKMLLNGLYYIHRNKILHRDMKAANILITKD--GILKLADFGLARAFSL 171 (310)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHEEECCC--CcEEECcCCCcccccC
Confidence 55544 788999999999999999999865 8999999999886643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-10 Score=129.02 Aligned_cols=145 Identities=13% Similarity=0.142 Sum_probs=104.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-+|.|+||.++..+.+ ++..+|+|.++-.-. -+.-++ +-.+|.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~-----------------------------t~~~r~------~A~~E~ 54 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL-----------------------------TEPERR------SAIQEM 54 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecccc-----------------------------CchhhH------HHHHHH
Confidence 46899999999999874 788999997642110 000011 223444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCC-CeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~-~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (968)
.-+.++++ ..-|..++.+. .+. .+|||+|++|+++.+...-.+ .-+..+++...++++.
T Consensus 55 ~lis~~~h-----------------P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 55 DLLSKLLH-----------------PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHhccC-----------------CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 44444332 22344555443 444 689999999999998765333 3466788888888877
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
+..+|+..++|||+|+.||+++.+ +.|+|-|||+++.+..+.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk~--~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTKD--KKVKLGDFGLAKILNPED 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhcccc--CceeecchhhhhhcCCch
Confidence 888999999999999999999976 789999999999998765
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-09 Score=120.31 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=58.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
....+|||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 456799999999999987643211 0123334444444433 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002092 302 DPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (968)
+ +.++|+|||++....
T Consensus 159 ~--~~~~l~dfg~a~~~~ 174 (291)
T cd05094 159 N--LLVKIGDFGMSRDVY 174 (291)
T ss_pred C--CcEEECCCCcccccC
Confidence 5 899999999987553
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-09 Score=117.61 Aligned_cols=145 Identities=14% Similarity=0.103 Sum_probs=92.0
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||.|++|.||+|.. .+|+.|++|+.+........ .+.. ..+.+|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~--------------------------~~~~------~~~~~e 54 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPET--------------------------SKEV------SALECE 54 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchh--------------------------HHHH------HHHHHH
Confidence 36799999999999987 47999999986543211000 0000 013445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
...+.++++ ..-+.+...+. ....+++|||++|.+|.+.... ....+.......+.+++
T Consensus 55 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~ 116 (266)
T cd06651 55 IQLLKNLQH-----------------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQIL 116 (266)
T ss_pred HHHHHHcCC-----------------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 555554432 01122222222 1335789999999998776432 12234444443333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 117 ~~l~~LH~~~i~H~~l~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd06651 117 EGMSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCCCccccc
Confidence 678899999999999999999865 889999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-09 Score=121.42 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=59.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....++||||++|.+|.++.... ..+++...+...+.++. +..+|..|++|+|+||.||+++.+ +++++.|||..
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~--~~~~l~~~~~~ 148 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSN 148 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC--CcEEEcccchh
Confidence 45678999999999998875322 12355555555554444 788999999999999999999865 88999999865
Q ss_pred ccc
Q 002092 316 KKL 318 (968)
Q Consensus 316 ~~l 318 (968)
..+
T Consensus 149 ~~~ 151 (327)
T cd08227 149 LSM 151 (327)
T ss_pred hcc
Confidence 443
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-09 Score=117.09 Aligned_cols=143 Identities=17% Similarity=0.191 Sum_probs=94.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|+.|++|.||+|.. ++|++||||+........ +... .+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~~------~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE-----------------------------KERE------DALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh-----------------------------HHHH------HHHHHH
Confidence 5789999999999997 479999999865322110 0000 112233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~ 278 (968)
+.+..+++ ..-+.+...+. ....+|+|||++|.+|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~ 113 (258)
T cd08215 51 KILKKLNH-----------------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLC 113 (258)
T ss_pred HHHHhcCC-----------------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHH
Confidence 33333321 00111112222 456689999999999877643321 3455566655555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+.....
T Consensus 114 ~~l~~lh~~~~~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 114 LALKYLHSRKILHRDIKPQNIFLTSN--GLVKLGDFGISKVLSS 155 (258)
T ss_pred HHHHHHHhCCEecccCChHHeEEcCC--CcEEECCccceeeccc
Confidence 778999999999999999999865 8899999999877644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.2e-09 Score=121.18 Aligned_cols=78 Identities=17% Similarity=0.307 Sum_probs=59.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.+... ........+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~--~~~kL~dfg~~~ 163 (293)
T cd06647 88 GDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCA 163 (293)
T ss_pred CCcEEEEEecCCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC--CCEEEccCccee
Confidence 456789999999999877632 33344444444443433 678899999999999999999865 889999999887
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 164 ~~~~ 167 (293)
T cd06647 164 QITP 167 (293)
T ss_pred cccc
Confidence 6654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.8e-10 Score=121.62 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=57.6
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCC------CceEEE
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP------HRPILL 310 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~------g~i~Li 310 (968)
....++||||++|.+|.++........+.......+.+++ +..+|..|++|+|+||.||+++.++. +.++++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 4667899999999999776432222344444444333333 67889999999999999999986521 136899
Q ss_pred ecccccccC
Q 002092 311 DFGLTKKLS 319 (968)
Q Consensus 311 DFG~~~~l~ 319 (968)
|||.+....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999876543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.1e-09 Score=121.62 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=57.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
....+++|||++|.+|.+...... ..+....+...+.++. +..+|..|++|+|++|.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 345689999999999887643211 1123333333333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002092 302 DPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (968)
+ +.++|+|||+++.+.
T Consensus 170 ~--~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 170 D--NVMKIADFGLARDVH 185 (334)
T ss_pred C--CcEEECCcccceecc
Confidence 5 899999999987664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=120.33 Aligned_cols=153 Identities=17% Similarity=0.158 Sum_probs=95.7
Q ss_pred CCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHH
Q 002092 112 ESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (968)
Q Consensus 112 ~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (968)
...++.|... +.||.|++|+||+|+.+ +|+.||||..+..-... .+.
T Consensus 11 ~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------~~~-- 58 (308)
T cd06634 11 DDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----------------------------NEK-- 58 (308)
T ss_pred CCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC----------------------------hHH--
Confidence 3445555433 56999999999999974 78999999765321100 000
Q ss_pred hhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHH
Q 002092 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (968)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (968)
.-++..|.+.+..+.+. ..+.+...+. ....++||||+.| ++.+........++...
T Consensus 59 ----~~~~~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~ 116 (308)
T cd06634 59 ----WQDIIKEVRFLQKLRHP-----------------NTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE 116 (308)
T ss_pred ----HHHHHHHHHHHHhCCCC-----------------CcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHH
Confidence 00123344444443220 1122222222 4567899999986 55554332333355555
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (308)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC--CcEEECCcccceeecC
Confidence 555444443 678899999999999999999865 8999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=123.49 Aligned_cols=75 Identities=23% Similarity=0.380 Sum_probs=55.5
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++||||+ |.+|.++. ....++...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 94 ~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIV--KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED--CELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEccccccccc
Confidence 357999999 44665543 233455555444444433 678899999999999999999865 89999999998876
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 169 ~~ 170 (343)
T cd07851 169 DD 170 (343)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-10 Score=118.89 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=83.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..||.|+||.||+-..+ +|+..|||-+|-...+ .+ ..++..|+|-...+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---ke---------------------------q~rll~e~d~~mks 119 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KE---------------------------QKRLLMEHDTVMKS 119 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HH---------------------------HHHHHHHHHHHHhh
Confidence 56899999999999974 8999999977643321 01 11122222222222
Q ss_pred ---HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHH----HHhcCCCHHHHHHHH-
Q 002092 203 ---ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCES----LEAFGVNKQKVVEEI- 274 (968)
Q Consensus 203 ---~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~----~~~~~~~~~~l~~~l- 274 (968)
-++.+|...+- ..+.-++.||.++ .+++.+-. .....+..+-+....
T Consensus 120 ~~cp~IVkfyGa~F------------------------~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itv 174 (361)
T KOG1006|consen 120 SNCPNIVKFYGALF------------------------SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITV 174 (361)
T ss_pred cCCcHHHHHhhhhh------------------------cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheee
Confidence 23444433221 1566789999996 34433211 111122222222211
Q ss_pred --HHHHHHHHH-hcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 --TRAYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 --~~~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+- +..++|||+||.|||++.. |.++|+|||+++.+-+
T Consensus 175 atV~A-L~yLK~~lkiIHRDvKPSNILldr~--G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 175 ATVDA-LDYLKEELKIIHRDVKPSNILLDRH--GDVKLCDFGICGQLVD 220 (361)
T ss_pred eehhH-HHHHHHHhhhhhccCChhheEEecC--CCEeeecccchHhHHH
Confidence 122 33332 4789999999999999976 8999999999998754
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-09 Score=119.54 Aligned_cols=141 Identities=16% Similarity=0.204 Sum_probs=89.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+. .+|+.||||+.+......- . .-++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-------------------------~----------~~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-------------------------V----------PSTAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-------------------------c----------hhHHHHHH
Confidence 4689999999999997 4899999998764321100 0 00123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.+. .-+.+...+. ....+++|||+++ +|.+...... ..++...+...+.+++
T Consensus 50 ~~l~~l~~~-----------------~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (283)
T cd07835 50 SLLKELNHP-----------------NIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQG 111 (283)
T ss_pred HHHHhcCCC-----------------CccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence 444433210 0111112222 4556899999964 6665432111 1345555555444443
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 112 L~~lH~~~~~H~dl~p~nil~~~~--~~~~l~df~~~~~~~ 150 (283)
T cd07835 112 IAYCHSHRVLHRDLKPQNLLIDRE--GALKLADFGLARAFG 150 (283)
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCC--CcEEEeecccccccC
Confidence 678899999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.1e-09 Score=116.16 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=61.2
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCC-ceEEEecccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLT 315 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~ 315 (968)
....++||||++|.+|.+..... ..++...+...+.+++ +..+|..|++|+|++|.||+++.+ + +++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccc
Confidence 45678999999999998764322 2455665555555544 688999999999999999999865 5 8999999998
Q ss_pred cccCH
Q 002092 316 KKLSS 320 (968)
Q Consensus 316 ~~l~~ 320 (968)
..+..
T Consensus 158 ~~~~~ 162 (267)
T PHA03390 158 KIIGT 162 (267)
T ss_pred eecCC
Confidence 76653
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.3e-10 Score=131.99 Aligned_cols=176 Identities=17% Similarity=0.197 Sum_probs=120.1
Q ss_pred HhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeC-C---CCEEEEEEecCChhhhhHhhHHHH
Q 002092 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNA 165 (968)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~-~---G~~VAVKV~~p~i~~~~~~Dl~~l 165 (968)
.+.-+.|+.+|+--+.++ ||-++++--+-.++ +-||+|.||.|++|+|+ . -..||||-++-|..+.-
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekq------- 673 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQ------- 673 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHHH-------
Confidence 444466777665444432 34444444333444 57999999999999985 3 35699999988765432
Q ss_pred HHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeE
Q 002092 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVL 244 (968)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vL 244 (968)
..||..||..+-+|.| ...++.--|.. +..-.+
T Consensus 674 -----------------------------rrdFL~EAsIMGQFdH-----------------PNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 674 -----------------------------RRDFLSEASIMGQFDH-----------------PNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred -----------------------------HhhhhhhhhhcccCCC-----------------CcEEEEEEEEecCceeEE
Confidence 2367788877766532 12344444554 344467
Q ss_pred EecccCCCCCCCHHHHHhcCCCHHHHHH--HHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 245 ILEFMDGIRLNDCESLEAFGVNKQKVVE--EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 245 VmE~i~G~~L~~~~~~~~~~~~~~~l~~--~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
++|||+.++|+.+++.....+..-+++. +.+.+-++.+-..|+|||||-..||||+.+ -..++.|||+++.+.++.
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn--LvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc--eEEEeccccceeecccCC
Confidence 9999999999998765544444434433 344445888889999999999999999854 556799999999886543
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.5e-09 Score=116.99 Aligned_cols=143 Identities=16% Similarity=0.172 Sum_probs=92.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCCh-hhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||.|++|.||+|.. .+++.||||+..... ... ... .+.+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------~~~------~~~~e 49 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKD------------------------------ERL------AAQNE 49 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccH------------------------------HHH------HHHHH
Confidence 5799999999999997 478999999865321 100 000 13344
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH-
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (968)
++.++++.+ ..-+.+...+. ....++||||++|.+|.+...... ...+...+...+.+++
T Consensus 50 ~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (256)
T cd08220 50 CQVLKLLSH-----------------PNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112 (256)
T ss_pred HHHHhhCCC-----------------CchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 444444321 00111112222 455689999999999987754321 2244455444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|+||+++.+ ++.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 113 ALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSS 154 (256)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCC
Confidence 678899999999999999999854 35679999999987754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-09 Score=117.88 Aligned_cols=140 Identities=19% Similarity=0.263 Sum_probs=88.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|+||+|+. .+++.||||+.+....... +.....|.
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~~~e~ 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------------------------------------QVNNLREI 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCch------------------------------------hhhHHHHH
Confidence 4689999999999997 4799999998654321100 00111233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++.+. ..-+.+...+. . +..++||||++| ++.+........++...+...+.+++
T Consensus 49 ~~l~~l~~h----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~ 111 (282)
T cd07831 49 QALRRLSPH----------------PNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLK 111 (282)
T ss_pred HHHhhcCCC----------------CCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 333333210 01122223332 2 567899999987 44333221122345555555555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++. +.++|+|||.+..+.
T Consensus 112 ~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~ 150 (282)
T cd07831 112 SLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIY 150 (282)
T ss_pred HHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccc
Confidence 78899999999999999999984 789999999987653
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.98 E-value=3e-09 Score=114.32 Aligned_cols=78 Identities=28% Similarity=0.294 Sum_probs=58.8
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...++||||++|.+|.+..... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 66 ~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~--~~~~l~d~~~~~~ 142 (250)
T cd05123 66 EKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD--GHIKLTDFGLAKE 142 (250)
T ss_pred CeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC--CcEEEeecCccee
Confidence 4458999999998887664321 2345555555444433 678899999999999999999865 8899999999876
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
...
T Consensus 143 ~~~ 145 (250)
T cd05123 143 LSS 145 (250)
T ss_pred ccc
Confidence 643
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.3e-09 Score=116.03 Aligned_cols=140 Identities=19% Similarity=0.177 Sum_probs=90.7
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+-||.|++|.||+|+.+ +.+.|++|+....-... ... +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------~~~----------~ 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDEN--------------------------LQS----------E 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchH--------------------------HHH----------H
Confidence 45899999999999964 35679999754221100 001 1
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc--------CCCHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF--------GVNKQ 268 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~--------~~~~~ 268 (968)
+.+|++.+.++.+. .-+.+...+. ....++||||++|.+|.++...... .+...
T Consensus 55 ~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~ 117 (275)
T cd05046 55 FRRELDMFRKLSHK-----------------NVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTK 117 (275)
T ss_pred HHHHHHHHHhcCCc-----------------ceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHH
Confidence 34455555554320 0122222222 3557899999999999877542221 24444
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+...+.+++ +..+|..|++|+|++|.||+++.+ +.+++.|||++...
T Consensus 118 ~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~~~~~~~~~ 167 (275)
T cd05046 118 QKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ--REVKVSLLSLSKDV 167 (275)
T ss_pred HHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC--CcEEEccccccccc
Confidence 4444444433 678999999999999999999865 88999999987644
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=117.06 Aligned_cols=81 Identities=14% Similarity=0.323 Sum_probs=59.5
Q ss_pred cCCCeEEecccCCCCCCCHHHH-H--hcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCceEEecCCCCceEEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~-~--~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (968)
....+|+|||++|.+|.+.... . ....+...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~--~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED--DKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC--CcEEEecc
Confidence 5667899999999999876431 1 12344444444444443 667774 789999999999999865 89999999
Q ss_pred ccccccCHH
Q 002092 313 GLTKKLSSS 321 (968)
Q Consensus 313 G~~~~l~~~ 321 (968)
|++......
T Consensus 159 g~~~~~~~~ 167 (269)
T cd08528 159 GLAKQKQPE 167 (269)
T ss_pred cceeecccc
Confidence 999876543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-09 Score=114.05 Aligned_cols=79 Identities=20% Similarity=0.339 Sum_probs=49.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH----hcCccccCCCCCceEEecCCCCceEEEeccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~----~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (968)
.++-.+.||.+. .-+..+...-... -+++++-.+.-+.++.++ .||++|||+||.|||++.. |.|+|+|||+
T Consensus 163 n~dV~IcMelMs-~C~ekLlkrik~p-iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~--GniKlCDFGI 238 (391)
T KOG0983|consen 163 NTDVFICMELMS-TCAEKLLKRIKGP-IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER--GNIKLCDFGI 238 (391)
T ss_pred CchHHHHHHHHH-HHHHHHHHHhcCC-chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC--CCEEeecccc
Confidence 344457787763 1122222111122 234444444333333332 5999999999999999965 9999999999
Q ss_pred ccccCHH
Q 002092 315 TKKLSSS 321 (968)
Q Consensus 315 ~~~l~~~ 321 (968)
++++.+.
T Consensus 239 sGrlvdS 245 (391)
T KOG0983|consen 239 SGRLVDS 245 (391)
T ss_pred cceeecc
Confidence 9998764
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.5e-10 Score=121.85 Aligned_cols=73 Identities=21% Similarity=0.445 Sum_probs=53.9
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.+.++||||++-....++.. .++...+...+-..+ +..+|..||+|||+||+|++.+.. .++-+|+|||++..
T Consensus 108 d~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~-t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR-TQRGVLVDFGLAQR 182 (418)
T ss_pred CeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc-cCCceEEechhHHH
Confidence 44578999998765555421 234444444444443 778899999999999999999875 57889999999876
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=118.66 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=85.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+...... . ..-.+.+|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------~----------~~~~~~~e~ 52 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-------------------------G----------VPSTAIREI 52 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-------------------------c----------chHHHHHHH
Confidence 57899999999999974 79999999754211000 0 001233455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (968)
+.+.++.+ + .+++++ . ....++||||+++ ++.+...... ...+...+...+.++
T Consensus 53 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 53 SLLKEMQH------------------G--NIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHhccC------------------C--CEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 55554432 1 133333 2 4567899999975 4444321111 112333333222232
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+ +..+|..|++|+|++|.||+++.+ ++.++|+|||++..+
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAF 153 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEccccccccc
Confidence 2 678899999999999999999854 367999999998755
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.2e-10 Score=124.31 Aligned_cols=160 Identities=22% Similarity=0.225 Sum_probs=106.1
Q ss_pred CCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhh
Q 002092 79 LPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII 158 (968)
Q Consensus 79 lp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~ 158 (968)
+...|..+.++-|+..-.+||++|-. .+=+|+|+-|.|++|+++ ++.||||-. ++.-
T Consensus 103 iGk~~s~e~k~qq~e~WeiPFe~IsE------------------LeWlGSGaQGAVF~Grl~-netVAVKKV----~elk 159 (904)
T KOG4721|consen 103 IGKAYSTEHKQQQEELWEIPFEEISE------------------LEWLGSGAQGAVFLGRLH-NETVAVKKV----RELK 159 (904)
T ss_pred hccceeeehhhhhhhhccCCHHHhhh------------------hhhhccCcccceeeeecc-CceehhHHH----hhhh
Confidence 33444445555555555555555432 245899999999999995 689999932 2233
Q ss_pred HhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee
Q 002092 159 LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238 (968)
Q Consensus 159 ~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~ 238 (968)
+.|++ +++++++. .-+.+--|..
T Consensus 160 ETdIK----------------------------------------HLRkLkH~-----------------NII~FkGVCt 182 (904)
T KOG4721|consen 160 ETDIK----------------------------------------HLRKLKHP-----------------NIITFKGVCT 182 (904)
T ss_pred hhhHH----------------------------------------HHHhccCc-----------------ceeeEeeeec
Confidence 33333 33333320 0111212211
Q ss_pred -cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 -~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
+--.+|+||||.-+.|..+.+. ...+.+..++.....+. +.++|.+.|||||||.-||||..+ .-|+|.|||-.
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~--d~VKIsDFGTS 259 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD--DVVKISDFGTS 259 (904)
T ss_pred CCceeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc--ceEEeccccch
Confidence 2224799999998888877542 33466777777666555 888999999999999999999976 67999999999
Q ss_pred cccCHH
Q 002092 316 KKLSSS 321 (968)
Q Consensus 316 ~~l~~~ 321 (968)
+.+++.
T Consensus 260 ~e~~~~ 265 (904)
T KOG4721|consen 260 KELSDK 265 (904)
T ss_pred Hhhhhh
Confidence 888765
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=98.96 E-value=2e-09 Score=115.35 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=58.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|+|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++++|||...
T Consensus 57 ~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~df~~~~ 133 (237)
T cd05576 57 EDSVFLVLQHAEGGKLWSHIS-KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR--GHIQLTYFSRWS 133 (237)
T ss_pred CCeEEEEEecCCCCCHHHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEecccchh
Confidence 345689999999999977643 223455555554444443 678899999999999999999865 889999999876
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 134 ~~~ 136 (237)
T cd05576 134 EVE 136 (237)
T ss_pred ccc
Confidence 543
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-09 Score=122.28 Aligned_cols=74 Identities=16% Similarity=0.297 Sum_probs=53.7
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+++|||+++ .+.+. +....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~--~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMET-DLYKL--IKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN--CDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhccc-CHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC--CCEEECcccceeec
Confidence 45899999986 33322 2223345444444444433 778999999999999999999865 89999999998765
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
.
T Consensus 157 ~ 157 (336)
T cd07849 157 D 157 (336)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-09 Score=124.39 Aligned_cols=140 Identities=19% Similarity=0.212 Sum_probs=97.2
Q ss_pred ccccccceeEEEEEEeC--CC---CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV--DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G---~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+-||+|.||.||+|+++ ++ .+||||..+-.-. . .+ .+-.+|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~--~--------------------------~~------~~~~e~ 208 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE--L--------------------------TK------EQIKEF 208 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc--c--------------------------cH------HHHHHH
Confidence 78999999999999984 33 2389996542100 0 00 011246
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
.+||+-+..+.| ..|-+.|. ....+||||+|.|++|.+...-....++..+-..-+
T Consensus 209 m~EArvMr~l~H--------------------~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 209 MKEARVMRQLNH--------------------PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred HHHHHHHHhCCC--------------------CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 778888877543 12334443 566789999999999988754322235555555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++. +++||..+++||||-..|+|+..+ +.+++.|||+++.-+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~--~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKK--GVVKISDFGLSRAGS 313 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCC--CeEEeCccccccCCc
Confidence 5544 888999999999999999999865 567999999977654
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-09 Score=117.62 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=57.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCC---CCce
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP---PHRP 307 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i 307 (968)
....++||||++|.+|.+...-.. ...+...+...+.+++ +..+|..|++|+|+||.||+++.+. ...+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 455789999999999887643211 1133344444444433 6788999999999999999998651 1279
Q ss_pred EEEecccccccC
Q 002092 308 ILLDFGLTKKLS 319 (968)
Q Consensus 308 ~LiDFG~~~~l~ 319 (968)
+|+|||++..+.
T Consensus 151 ~l~dfg~~~~~~ 162 (269)
T cd05044 151 KIGDFGLARDIY 162 (269)
T ss_pred EECCcccccccc
Confidence 999999987664
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.1e-09 Score=131.98 Aligned_cols=144 Identities=13% Similarity=0.062 Sum_probs=90.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||.||+|+.+ +++.||+|++....... .... .|..|+
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-----------------------------~~~~------~~~~EI 63 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-----------------------------REKS------QLVIEV 63 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-----------------------------HHHH------HHHHHH
Confidence 57999999999999974 68899999875321100 0000 123355
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~ 276 (968)
..+.++.+ ...+.+-..+. ....+|||||++|.+|.+++... ...++...+...+.+
T Consensus 64 ~IL~~L~H-----------------PNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~Q 126 (1021)
T PTZ00266 64 NVMRELKH-----------------KNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQ 126 (1021)
T ss_pred HHHHHcCC-----------------CCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHH
Confidence 55554432 11122233332 22357999999999998764321 123555555555544
Q ss_pred HH--HHHHHhc-------CccccCCCCCceEEecC---------------CCCceEEEecccccccC
Q 002092 277 AY--AHQIYVD-------GFFNGDPHPGNFLVSKD---------------PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~--l~~i~~~-------G~~H~D~hPgNIlv~~~---------------~~g~i~LiDFG~~~~l~ 319 (968)
++ +..+|.. +|+|+||||.||||+.+ ..+.++|+|||++..+.
T Consensus 127 IL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 127 LLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred HHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence 44 6677874 59999999999999642 12348999999987653
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-09 Score=120.69 Aligned_cols=75 Identities=13% Similarity=0.223 Sum_probs=52.9
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++||||+++. +..........++...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 166 (311)
T cd07866 90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ--GILKIADFGLARPYD 166 (311)
T ss_pred EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECcCccchhcc
Confidence 47999999863 2222111112344555444444443 778899999999999999999865 899999999988654
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.94 E-value=6e-09 Score=114.37 Aligned_cols=79 Identities=25% Similarity=0.350 Sum_probs=57.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....++||||+ +.++.+...... ..++...+...+.+++ +..+|..|++|+|++|.||+++++ +.++|+|||.+
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~--~~~~l~d~~~~ 146 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP--EVVKIADFGLA 146 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CCEEEeecccc
Confidence 45568999999 446654432211 2345555555554544 678899999999999999999865 89999999998
Q ss_pred cccCH
Q 002092 316 KKLSS 320 (968)
Q Consensus 316 ~~l~~ 320 (968)
..+..
T Consensus 147 ~~~~~ 151 (283)
T cd07830 147 REIRS 151 (283)
T ss_pred eeccC
Confidence 76643
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.6e-09 Score=117.41 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=57.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh--------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecC
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA--------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD 302 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~--------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~ 302 (968)
....+++|||++|.+|.+...... ..++...+...+.++. +..+|..|++|+|++|.||+++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 455789999999999877643211 1133344444444433 678899999999999999999865
Q ss_pred CCCceEEEecccccccC
Q 002092 303 PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 303 ~~g~i~LiDFG~~~~l~ 319 (968)
+.++|+|||++..+.
T Consensus 159 --~~~kL~dfg~~~~~~ 173 (280)
T cd05092 159 --LVVKIGDFGMSRDIY 173 (280)
T ss_pred --CCEEECCCCceeEcC
Confidence 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.6e-09 Score=120.98 Aligned_cols=146 Identities=20% Similarity=0.254 Sum_probs=85.7
Q ss_pred cccccceeEEEEEEe-CCCCEEEEEEecCCh--hhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 125 plgsaSigqV~~A~l-~~G~~VAVKV~~p~i--~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
-.|.|-|+.|.+|.. .-|+.|||||++-+- -+.-..++++|+++.. .|-...
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~-------------------------AD~Edk 493 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND-------------------------ADPEDK 493 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc-------------------------cCchhh
Confidence 469999999999996 468899999998652 1222344555544421 111111
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCC----HHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN----KQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~----~~~l~~~l~~~ 277 (968)
. +..++...|.. ....+||.|-+. ..|.++ +...|.+ ...+-.-.-++
T Consensus 494 ~-Hclrl~r~F~h------------------------knHLClVFE~Ls-lNLRev--LKKyG~nvGL~ikaVRsYaqQL 545 (752)
T KOG0670|consen 494 F-HCLRLFRHFKH------------------------KNHLCLVFEPLS-LNLREV--LKKYGRNVGLHIKAVRSYAQQL 545 (752)
T ss_pred h-HHHHHHHHhhh------------------------cceeEEEehhhh-chHHHH--HHHhCcccceeehHHHHHHHHH
Confidence 1 23333333321 233467877652 334443 3333322 22211111122
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (968)
| ++.+-..||+||||||.||||.+. ...++|||||.+...++.+-.
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE~-k~iLKLCDfGSA~~~~eneit 593 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNES-KNILKLCDFGSASFASENEIT 593 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEeccC-cceeeeccCcccccccccccc
Confidence 2 444556899999999999999864 456899999999988776544
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-09 Score=116.77 Aligned_cols=144 Identities=17% Similarity=0.207 Sum_probs=89.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.|++|++|.||+|+. .+|+.|++|..+....... . .-++..|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------~------~~~~~~e~ 49 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-----------------------------I------PKTALREI 49 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccch-----------------------------h------HHHHHHHH
Confidence 4689999999999997 4799999998765432110 0 00112233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+...+. ....+++|||+++ ++.+........++...+...+.+++ +
T Consensus 50 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l 111 (283)
T cd05118 50 KLLKELNH-----------------PNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHhcC-----------------CCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 33333321 00111111121 3556899999987 55544322222444444444333333 6
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
..+|..|++|+|+||.||+++.+ +.++|+|||.+..+....
T Consensus 112 ~~LH~~~i~H~dl~p~nili~~~--~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTE--GVLKLADFGLARSFGSPV 152 (283)
T ss_pred HHHHHCCeeecCcCHHHEEECCC--CcEEEeeeeeeEecCCCc
Confidence 78899999999999999999865 889999999988776543
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.4e-09 Score=118.83 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=48.8
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+++||++.+ .+.+.... ........+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 102 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~--~~~~l~DFGla~~~~ 177 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN--NRGYIIDYGIASHFI 177 (294)
T ss_pred EEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CcEEEEEcCCceeec
Confidence 3678887743 23222111 11123333333333333 678899999999999999999855 889999999998764
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.7e-09 Score=119.08 Aligned_cols=145 Identities=17% Similarity=0.182 Sum_probs=87.6
Q ss_pred ccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||+|++|.||+|+.+ +|+.||||+.++..... ..+.. .+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~------------------------~~~~~----------~~~~ 51 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY------------------------TGISQ----------SACR 51 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc------------------------cCccH----------HHHH
Confidence 45999999999999974 58999999887643100 00000 1123
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHh----cCCCHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEA----FGVNKQKVVEE 273 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~----~~~~~~~l~~~ 273 (968)
|+..+.++.+ ..-+.+...+. . ...+|||||+++. +.+...... ..+....+...
T Consensus 52 e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i 113 (316)
T cd07842 52 EIALLRELKH-----------------ENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSL 113 (316)
T ss_pred HHHHHHhcCC-----------------CCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHH
Confidence 4333333321 11122333332 2 4468999999863 333221111 12333344333
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecC--CCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|+|++|.||+++.+ .++.++|+|||++..+..
T Consensus 114 ~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 33333 678899999999999999999861 138899999999886643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.1e-10 Score=112.46 Aligned_cols=143 Identities=16% Similarity=0.224 Sum_probs=94.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.+|.|.++.|+.|+. .+.+.++||+++|=-.+.+.+++++|+.+.. +.
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------g~----------------------- 93 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------GP----------------------- 93 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-------CC-----------------------
Confidence 5789999999999984 6889999999999888888888887766531 11
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i 282 (968)
|+..+-+... =|. |.-..|+.||++......+-.. -...+..-....++.+ +...
T Consensus 94 -NIi~L~DiV~-------------------Dp~---SktpaLiFE~v~n~Dfk~ly~t-l~d~dIryY~~elLkA-LdyC 148 (338)
T KOG0668|consen 94 -NIIKLLDIVK-------------------DPE---SKTPSLIFEYVNNTDFKQLYPT-LTDYDIRYYIYELLKA-LDYC 148 (338)
T ss_pred -Ceeehhhhhc-------------------Ccc---ccCchhHhhhhccccHHHHhhh-hchhhHHHHHHHHHHH-HhHH
Confidence 1111111100 000 3334589999988554433110 0011222222222222 6667
Q ss_pred HhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 283 YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 283 ~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
|..|++|||+||.|+||+.. ..++.|||||++....+..
T Consensus 149 HS~GImHRDVKPhNvmIdh~-~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred HhcCcccccCCcceeeechh-hceeeeeecchHhhcCCCc
Confidence 88999999999999999975 4689999999998776644
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.4e-09 Score=114.22 Aligned_cols=80 Identities=14% Similarity=0.175 Sum_probs=59.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecc
Q 002092 239 SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
....++||||++|.+|.+..... ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~--~~~kl~d~g 148 (256)
T cd08530 71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN--DLVKIGDLG 148 (256)
T ss_pred CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC--CcEEEeecc
Confidence 35568999999999988764321 12344454444444433 678899999999999999999965 889999999
Q ss_pred cccccCH
Q 002092 314 LTKKLSS 320 (968)
Q Consensus 314 ~~~~l~~ 320 (968)
++..+..
T Consensus 149 ~~~~~~~ 155 (256)
T cd08530 149 ISKVLKK 155 (256)
T ss_pred chhhhcc
Confidence 9876644
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.2e-09 Score=114.69 Aligned_cols=142 Identities=15% Similarity=0.190 Sum_probs=91.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||+|++|.||+++. .+|+.||||..... ..... .-++.+|
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKE------------------------------------REESRKE 49 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHH------------------------------------HHHHHHH
Confidence 5799999999999997 47899999975421 10000 0012334
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH-
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (968)
.+.++++.+ ..-+.+...+. ....+|||||++|.+|.+...... ...+...+...+.++.
T Consensus 50 ~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08218 50 VAVLSNMKH-----------------PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICL 112 (256)
T ss_pred HHHHHhCCC-----------------CCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 333333321 00122222222 456789999999998876543221 1244444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~~l~~~nil~~~~--~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 113 ALKHVHDRKILHRDIKSQNIFLTKD--GTIKLGDFGIARVLNS 153 (256)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCC--CCEEEeeccceeecCc
Confidence 677899999999999999999865 7899999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.1e-09 Score=119.01 Aligned_cols=140 Identities=16% Similarity=0.195 Sum_probs=87.9
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.++||.|++|.||+|+.+ +|+.||||+......... ..-++..|
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E 59 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------------------------------LAKRTYRE 59 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------------------------------hhHHHHHH
Confidence 368999999999999864 899999997643211000 00112234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
...+.++++ ..-+.+...+. ....+++|||+.+ +|.+.. .........+...+.+++
T Consensus 60 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~~~~ql~~ 119 (328)
T cd07856 60 LKLLKHLRH-----------------ENIISLSDIFISPLEDIYFVTELLGT-DLHRLL--TSRPLEKQFIQYFLYQILR 119 (328)
T ss_pred HHHHHhcCC-----------------CCeeeEeeeEecCCCcEEEEeehhcc-CHHHHH--hcCCCCHHHHHHHHHHHHH
Confidence 444444322 11233444443 3456899999954 554432 222333333333233322
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++....
T Consensus 120 aL~~LH~~~iiH~dl~p~Nili~~~--~~~~l~dfg~~~~~~ 159 (328)
T cd07856 120 GLKYVHSAGVVHRDLKPSNILINEN--CDLKICDFGLARIQD 159 (328)
T ss_pred HHHHHHhCCcccCCCCHHHEeECCC--CCEEeCccccccccC
Confidence 678899999999999999999865 889999999987554
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.6e-09 Score=115.09 Aligned_cols=137 Identities=14% Similarity=0.155 Sum_probs=85.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+++. .+|+.||||..+...... .+.++.+|.
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK------------------------------------EQKRLLMDL 53 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChH------------------------------------HHHHHHHHH
Confidence 5799999999999997 478999999765322110 011233344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHH----HhcCCCHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI 274 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~----~~~~~~~~~l~~~l 274 (968)
..+.++.. + -.|++++. ....+++|||+++ ++.++... ....+....+...+
T Consensus 54 ~~l~~~~~-----------------~--~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~ 113 (288)
T cd06616 54 DVVMRSSD-----------------C--PYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA 113 (288)
T ss_pred HHHHHhcC-----------------C--CCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44443321 1 12333332 4567899999875 44333211 11224444444444
Q ss_pred HHHH--HHHHHh-cCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.++. +..+|. .|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 158 (288)
T cd06616 114 VATVKALNYLKEELKIIHRDVKPSNILLDRN--GNIKLCDFGISGQL 158 (288)
T ss_pred HHHHHHHHHHhhcCCeeccCCCHHHEEEccC--CcEEEeecchhHHh
Confidence 4433 667776 599999999999999865 88999999988654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.5e-09 Score=114.67 Aligned_cols=75 Identities=21% Similarity=0.301 Sum_probs=54.2
Q ss_pred eEEecccCCCCCCCHHHHHhc-----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 243 VLILEFMDGIRLNDCESLEAF-----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~-----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
++++||.++.++.+....... ..+...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~--~~~kl~dfg~~ 160 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN--MTVCVADFGLS 160 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC--CCEEECccccc
Confidence 689999999888765432211 123333444334333 678899999999999999999855 88999999998
Q ss_pred cccC
Q 002092 316 KKLS 319 (968)
Q Consensus 316 ~~l~ 319 (968)
..+.
T Consensus 161 ~~~~ 164 (273)
T cd05074 161 KKIY 164 (273)
T ss_pred cccc
Confidence 8653
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.5e-09 Score=114.37 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=57.6
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...++||||+++ +|.+.........+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 71 ~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~--~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD--GVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC--CCEEEecCCcccc
Confidence 456899999986 67665432212455555444444443 678999999999999999999865 8999999999876
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
+..
T Consensus 148 ~~~ 150 (282)
T cd07829 148 FGI 150 (282)
T ss_pred cCC
Confidence 643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.4e-09 Score=113.23 Aligned_cols=145 Identities=19% Similarity=0.183 Sum_probs=89.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+......- . ...+.+|.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------~------~~~~~~e~ 49 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------------------------I------PLSTLREI 49 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------------------------h------hhhHHHHH
Confidence 46899999999999986 599999998764322100 0 00122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c-----CCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~ 275 (968)
..+.+++.. . ...-+.+-..+. . ...+++|||+++ ++.+..... ...++...+...+.
T Consensus 50 ~~l~~l~~~-~-------------h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~ 114 (287)
T cd07838 50 ALLKQLESF-E-------------HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMR 114 (287)
T ss_pred HHHHHhhcc-C-------------CCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHH
Confidence 333333321 0 000122222222 1 226899999986 555543221 11345555555444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..++.
T Consensus 115 ~i~~al~~LH~~~i~h~~l~~~nili~~~--~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 115 QLLRGVDFLHSHRIVHRDLKPQNILVTSD--GQVKIADFGLARIYSF 159 (287)
T ss_pred HHHHHHHHHHHCCeeeccCChhhEEEccC--CCEEEeccCcceeccC
Confidence 443 678899999999999999999966 8999999999877643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.9e-09 Score=119.21 Aligned_cols=76 Identities=25% Similarity=0.332 Sum_probs=55.4
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+
T Consensus 80 ~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~--~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD--CELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC--CCEEeCcCCCceec
Confidence 35789999875 5544321 223445555555554444 778999999999999999999865 88999999999876
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 156 ~~ 157 (332)
T cd07857 156 SE 157 (332)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.1e-09 Score=116.14 Aligned_cols=78 Identities=19% Similarity=0.267 Sum_probs=53.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....+++|||+++ .+.++.......++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~--~~~kL~dfg~~ 162 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS--GNVKLCDFGIS 162 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC--CCEEECccccc
Confidence 3456899999965 44444322222344444334344333 667786 699999999999999865 89999999998
Q ss_pred cccC
Q 002092 316 KKLS 319 (968)
Q Consensus 316 ~~l~ 319 (968)
..+.
T Consensus 163 ~~~~ 166 (296)
T cd06618 163 GRLV 166 (296)
T ss_pred hhcc
Confidence 7664
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-09 Score=114.16 Aligned_cols=140 Identities=15% Similarity=0.124 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeCC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~-----G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+-||.|++|.||+|...+ ++.|++|+.+....... .-.+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~------------------------------------~~~~ 55 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ------------------------------------VTLL 55 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHH------------------------------------HHHH
Confidence 568999999999999865 78899998664322110 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee--cCCCeEEecccCCCCCCCHHHHHh-------cCCCHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-------FGVNKQ 268 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~-------~~~~~~ 268 (968)
.+|+..+.++.+ ++ +.+..... ....++++||+++.+|.+...... ..+...
T Consensus 56 ~~e~~~l~~l~h------------------~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~ 117 (280)
T cd05043 56 LQESCLLYGLSH------------------QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQ 117 (280)
T ss_pred HHHHHHHHhCCC------------------CCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHH
Confidence 345444444321 11 11111111 245789999999989877643221 124444
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 118 ~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~--~~~kl~d~g~~~~~~ 168 (280)
T cd05043 118 QLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE--LQVKITDNALSRDLF 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC--CcEEECCCCCccccc
Confidence 4444444444 678899999999999999999865 899999999988664
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.1e-09 Score=120.63 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=52.1
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++||||+++ +|.+. +....+....+...+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 91 ~~lv~e~~~~-~L~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-~~~~kl~dfg~~~~~~ 166 (342)
T cd07854 91 VYIVQEYMET-DLANV--LEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFGLARIVD 166 (342)
T ss_pred EEEEeecccc-cHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-CceEEECCcccceecC
Confidence 4799999985 55433 2222344444443333333 678899999999999999999854 3678999999987664
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=5e-09 Score=120.39 Aligned_cols=140 Identities=19% Similarity=0.274 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.-||+|.||.|..|+. .+|.+||||+.+...- |...++. +.+|.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-----n~~~~~k------------------------------~~rev 106 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-----NPSKRQK------------------------------LGREV 106 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhccc-----ChHHHHH------------------------------HHHHH
Confidence 5799999999999997 4899999998753211 1111110 22344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+..+. ++. |.+-.++. ....+|||||+.|+.+.+. +...+...+..++....-.
T Consensus 107 ~imk~l~------------------HPnIvkl~~v~~t~~~lylV~eya~~ge~~~y--l~~~gr~~e~~ar~~F~q~vs 166 (596)
T KOG0586|consen 107 DIMKSLN------------------HPNIVKLFSVIETEATLYLVMEYASGGELFDY--LVKHGRMKEKEARAKFRQIVS 166 (596)
T ss_pred HHHHhcC------------------CcceeeeeeeeeecceeEEEEEeccCchhHHH--HHhcccchhhhhhhhhHHHHH
Confidence 4444432 222 34445554 4567899999999888776 4455555444444444322
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++.+|.++|+|||||..|||++.+ ..|+|.|||+...++.
T Consensus 167 aveYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 167 AVEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDY 207 (596)
T ss_pred HHHHHhhcceeccccchhhcccccc--cceeeeccccceeecc
Confidence 778899999999999999999965 7799999999998864
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-09 Score=105.60 Aligned_cols=81 Identities=22% Similarity=0.332 Sum_probs=53.6
Q ss_pred cCCCeEEecccCCCCCCCHH--HHHhcCCCHHHHHHHHHHHH---HHHHHh-cCccccCCCCCceEEecCCCCceEEEec
Q 002092 239 SSETVLILEFMDGIRLNDCE--SLEAFGVNKQKVVEEITRAY---AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~--~~~~~~~~~~~l~~~l~~~~---l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (968)
+.+-++.||.++ .+++.+. .+...+.-++.+.-.++-.. +..+|. ..++|||+||+|||++.+ |+++++||
T Consensus 117 egdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~--GqVKiCDF 193 (282)
T KOG0984|consen 117 EGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYD--GQVKICDF 193 (282)
T ss_pred cccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccC--CcEEEccc
Confidence 788899999996 3433321 12222222333333332222 444443 689999999999999977 99999999
Q ss_pred ccccccCHHH
Q 002092 313 GLTKKLSSSM 322 (968)
Q Consensus 313 G~~~~l~~~~ 322 (968)
|+++.|.+..
T Consensus 194 GIsG~L~dSi 203 (282)
T KOG0984|consen 194 GISGYLVDSI 203 (282)
T ss_pred ccceeehhhh
Confidence 9999987643
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-09 Score=118.99 Aligned_cols=141 Identities=18% Similarity=0.264 Sum_probs=90.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+-||+|+-+.||++...+.+-+|+|-.. ....|-+ .++ -|++|..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~-----~~~~D~q--------------------tl~----------gy~nEI~ 411 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVV-----LLEADNQ--------------------TLD----------GYRNEIA 411 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHH-----HhhcCHH--------------------HHH----------HHHHHHH
Confidence 5799999999999997776777776211 0011111 111 2667777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCH----HHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEIT 275 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~----~~l~~~l~ 275 (968)
-+.+|+.. ..|-++|. .+..+||||+=+ ..|..+..- ...... ..+.+.++
T Consensus 412 lL~KLkg~-------------------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k-~~~~~~~~~lk~ywkqML 470 (677)
T KOG0596|consen 412 LLNKLKGH-------------------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKK-KKSIDPDWFLKFYWKQML 470 (677)
T ss_pred HHHHhcCC-------------------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHh-ccCCCchHHHHHHHHHHH
Confidence 77777642 34555653 566789999854 344444221 112222 11222222
Q ss_pred HHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHH
Q 002092 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (968)
Q Consensus 276 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (968)
. .++.||.+||||+||||.|+|+-. |.++|||||++..+..+...
T Consensus 471 ~-aV~~IH~~gIVHSDLKPANFLlVk---G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 471 L-AVKTIHQHGIVHSDLKPANFLLVK---GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred H-HHHHHHHhceeecCCCcccEEEEe---eeEEeeeechhcccCccccc
Confidence 2 267789999999999999999862 89999999999998766543
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.3e-10 Score=135.50 Aligned_cols=73 Identities=21% Similarity=0.309 Sum_probs=53.2
Q ss_pred eEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH---HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 243 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY---AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~---l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
++-||||+-..+.++..-....- ....+..+++-+ +.+||..|+||||+||.||+++.+ +.|+|.|||++..+
T Consensus 672 YIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~--~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 672 YIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR--NSVKIGDFGLATDL 747 (1351)
T ss_pred EEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC--CCeeecccccchhh
Confidence 68999999777776643222211 223333344333 678999999999999999999965 88999999998764
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.3e-09 Score=121.17 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=53.6
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++||||+.| .|.+... ....++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 82 ~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLMES-DLHHIIH-SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED--CELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhhh-hHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--CcEEecccccceee
Confidence 45799999976 5544321 122244444444444433 678899999999999999999865 89999999998765
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
.
T Consensus 158 ~ 158 (334)
T cd07855 158 S 158 (334)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.4e-09 Score=127.90 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=51.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhc----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (968)
....++|||++.+. +.+....... ......+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+||
T Consensus 235 ~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~--~~vkL~DF 311 (501)
T PHA03210 235 EANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD--GKIVLGDF 311 (501)
T ss_pred CCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEeC
Confidence 45568999998653 2222110000 011122222222322 778899999999999999999865 89999999
Q ss_pred ccccccCH
Q 002092 313 GLTKKLSS 320 (968)
Q Consensus 313 G~~~~l~~ 320 (968)
|++..+..
T Consensus 312 Gla~~~~~ 319 (501)
T PHA03210 312 GTAMPFEK 319 (501)
T ss_pred CCceecCc
Confidence 99987653
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.9e-09 Score=116.10 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=55.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....++||||+.|.++.++.... ..+.+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.+++.|||.+
T Consensus 71 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~--~~~~~~~~~~~ 148 (328)
T cd08226 71 GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD--GLVSLSGLSHL 148 (328)
T ss_pred CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC--CcEEEechHHH
Confidence 45568999999999887764321 12344444444444433 678899999999999999999865 88999999764
Q ss_pred c
Q 002092 316 K 316 (968)
Q Consensus 316 ~ 316 (968)
.
T Consensus 149 ~ 149 (328)
T cd08226 149 Y 149 (328)
T ss_pred h
Confidence 3
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.8e-09 Score=117.01 Aligned_cols=141 Identities=20% Similarity=0.209 Sum_probs=87.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||......... . ....+..|.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----~------------------------------~~~~~~~E~ 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-----T------------------------------DAQRTFREI 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-----h------------------------------hhhhhhHHH
Confidence 57999999999999975 78999999764321100 0 000123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec---CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++.+. ...+.+..++.. ...+|||||++| +|.+.. .....+.......+.+++
T Consensus 58 ~~l~~l~~h----------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~i~~qi~~ 118 (337)
T cd07852 58 MFLQELGDH----------------PNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVI--RANILEDVHKRYIMYQLLK 118 (337)
T ss_pred HHHHHhcCC----------------CCccceeeeeccCCCceEEEEeccccc-CHHHHH--hcCCCCHHHHHHHHHHHHH
Confidence 555554110 111222232221 235899999986 554432 222334333333333322
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 119 ~L~~LH~~~i~H~dl~p~nill~~~--~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 119 ALKYIHSGNVIHRDLKPSNILLNSD--CRVKLADFGLARSLSE 159 (337)
T ss_pred HHHHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccchhcccc
Confidence 678899999999999999999865 8999999999886643
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.1e-09 Score=111.60 Aligned_cols=157 Identities=17% Similarity=0.251 Sum_probs=100.7
Q ss_pred cccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhh
Q 002092 117 MFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (968)
Q Consensus 117 ~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (968)
.|...+ .+-+|.|..+.|.|+.. ++|.+.|+|++--..... ..+-..++.+...+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~-----------------------~~e~~~~~~EaT~~ 71 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE-----------------------SGETPYEMREATRQ 71 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc-----------------------CCccHHHHHHHHHH
Confidence 344444 35688999999999987 488999999865322211 11113444444434
Q ss_pred ccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC-ceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCC---HHH
Q 002092 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVN---KQK 269 (968)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~ 269 (968)
|++ .+.++ .+ ++ -+.+-.+|. .+--+||.|.++-+.|-|.... ..-++ ...
T Consensus 72 Ev~------ILRqv---~G--------------HP~II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~ 127 (411)
T KOG0599|consen 72 EIS------ILRQV---MG--------------HPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRR 127 (411)
T ss_pred HHH------HHHHh---cC--------------CCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHH
Confidence 333 22222 21 22 244555665 4556799999998888776431 11122 234
Q ss_pred HHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH
Q 002092 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (968)
Q Consensus 270 l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (968)
+++.+.+. ...+|..+|+|||+||+|||++++ .+|+|.|||.+.++.+..+
T Consensus 128 iMrqlfeg-VeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~~l~~Gek 178 (411)
T KOG0599|consen 128 IMRQLFEG-VEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFACQLEPGEK 178 (411)
T ss_pred HHHHHHHH-HHHHHHhhhhhcccChhheeeccc--cceEEeccceeeccCCchh
Confidence 44444443 567899999999999999999966 8999999999999987553
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.9e-09 Score=118.71 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=53.9
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|||||++| .|.+... ....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 83 ~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDT-DLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN--CDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECcCcccccc
Confidence 45899999975 4444321 112344444444444433 678899999999999999999865 88999999998766
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 159 ~~ 160 (337)
T cd07858 159 SE 160 (337)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.3e-09 Score=123.44 Aligned_cols=141 Identities=18% Similarity=0.210 Sum_probs=96.6
Q ss_pred ccccccceeEEEEEEeC--CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G~--~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+-||+||||.||+|... +|+ .||||.++++....+ ++ ||+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~--------------------------md----------dfl 159 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI--------------------------MD----------DFL 159 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh--------------------------HH----------HHH
Confidence 45899999999999863 555 589999988754321 11 678
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEIT 275 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~ 275 (968)
+|+.++.++++. .+-++|. ...-.||||.+++++|-+...- ....+-...+..-+.
T Consensus 160 rEas~M~~L~H~--------------------hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~ 219 (1039)
T KOG0199|consen 160 REASHMLKLQHP--------------------HLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAM 219 (1039)
T ss_pred HHHHHHHhccCc--------------------ceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHH
Confidence 899998887652 1223332 4455789999999998765332 111122233333333
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
++. +.++-..++||||+-..|+++-.. ..|+|+|||+++.|...+
T Consensus 220 QiA~aM~YLeskrlvHRDLAARNlllasp--rtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 220 QIAKAMQYLESKRLVHRDLAARNLLLASP--RTVKICDFGLMRALGENE 266 (1039)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhheeccc--ceeeeecccceeccCCCC
Confidence 332 344456899999999999999753 689999999999987543
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.6e-09 Score=119.19 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=55.1
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~--~~~~L~dfg~~~~~ 153 (330)
T cd07834 78 DVYIVTELMET-DLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN--CDLKICDFGLARGV 153 (330)
T ss_pred ceEEEecchhh-hHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccCceEee
Confidence 45899999985 4544321 111344444444333333 678899999999999999999865 89999999999877
Q ss_pred CHH
Q 002092 319 SSS 321 (968)
Q Consensus 319 ~~~ 321 (968)
...
T Consensus 154 ~~~ 156 (330)
T cd07834 154 DPD 156 (330)
T ss_pred ccc
Confidence 654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.6e-09 Score=111.40 Aligned_cols=79 Identities=23% Similarity=0.337 Sum_probs=60.3
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...+++|||+++.+|.+..... ...+...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 60 ~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~--~~~~l~d~~~~~~ 136 (244)
T smart00220 60 DKLYLVMEYCDGGDLFDLLKKR-GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED--GHVKLADFGLARQ 136 (244)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC--CcEEEccccceee
Confidence 5568999999998887764322 1245555555444433 678899999999999999999865 8999999999988
Q ss_pred cCHH
Q 002092 318 LSSS 321 (968)
Q Consensus 318 l~~~ 321 (968)
+...
T Consensus 137 ~~~~ 140 (244)
T smart00220 137 LDPG 140 (244)
T ss_pred eccc
Confidence 7654
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-09 Score=131.91 Aligned_cols=78 Identities=18% Similarity=0.247 Sum_probs=56.7
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH---HHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR---AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~---~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.+-+|-||||+|++|.++.+.. +...+.+.+.... .-+..||++|||||||||.||+++.. |-|++.|||++.
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~--g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN--GLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC--CcEEeeccccee
Confidence 4456899999999999975432 2222222111111 11567899999999999999999976 899999999999
Q ss_pred ccCHH
Q 002092 317 KLSSS 321 (968)
Q Consensus 317 ~l~~~ 321 (968)
.+...
T Consensus 1383 ki~~~ 1387 (1509)
T KOG4645|consen 1383 KIKNN 1387 (1509)
T ss_pred EecCc
Confidence 88654
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-09 Score=124.07 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=59.4
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.++.++..|||.|+-++.+.---..++....+-..+-+.+ +..+|..++||||+|.||||++-| |.|.|.|||.+.
T Consensus 101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld--GdirLADFGVSA 178 (1187)
T KOG0579|consen 101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD--GDIRLADFGVSA 178 (1187)
T ss_pred cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec--CcEeeecccccc
Confidence 6777899999999998876432233444333332222222 778899999999999999999977 999999999877
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
....
T Consensus 179 Kn~~ 182 (1187)
T KOG0579|consen 179 KNKS 182 (1187)
T ss_pred cchh
Confidence 6543
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.8e-09 Score=111.56 Aligned_cols=144 Identities=15% Similarity=0.166 Sum_probs=88.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
++|++|++|.||+|+.+ +|..||+|.....-... . .+-.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~---------------------------------~~~~~~~E~ 50 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--K---------------------------------EKEASKKEV 50 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--h---------------------------------hhHHHHHHH
Confidence 57999999999999974 78999999764310000 0 000122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
..+.++++. .-+.+...+. ....+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 51 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (257)
T cd08225 51 ILLAKMKHP-----------------NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG 113 (257)
T ss_pred HHHHhCCCC-----------------ChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 443333210 0111111111 455689999999999877643211 1234444444333332
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 114 l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 114 LKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccC
Confidence 678899999999999999999865 23468999998876643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.1e-10 Score=114.32 Aligned_cols=74 Identities=22% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
.-+|||.+|+ .|+..+-. ..+....+-..+-.++ +..||+..++|||+||.|+||+.+ |.++|.|||++
T Consensus 98 t~ylVf~~ce----hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d--gilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCE----HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD--GILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhh----hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC--ceEEeeccccc
Confidence 3579999997 33322211 1223333322222222 778999999999999999999966 89999999999
Q ss_pred cccCH
Q 002092 316 KKLSS 320 (968)
Q Consensus 316 ~~l~~ 320 (968)
+.++.
T Consensus 172 r~fs~ 176 (376)
T KOG0669|consen 172 RAFST 176 (376)
T ss_pred cceec
Confidence 87764
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.5e-09 Score=114.46 Aligned_cols=142 Identities=21% Similarity=0.172 Sum_probs=91.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+-+|+|.||.||+|.+ +++.|||||..+.-.+....+-.+. .+..+ +-.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy----------------------------~lp~m--~h~ 264 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIY----------------------------SLPGM--KHE 264 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHH----------------------------hccCc--cch
Confidence 4689999999999998 4699999997765444433332211 11111 223
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHH---HHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~---l~~~l~~~~l~ 280 (968)
|+-+|-..=+. .+.. ..+..||+||-+-++|.++.. ..-++-.. +++.+++- +.
T Consensus 265 nIl~Fi~~ekr------------------~t~~--~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarG-La 321 (534)
T KOG3653|consen 265 NILQFIGAEKR------------------GTAD--RMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARG-LA 321 (534)
T ss_pred hHHHhhchhcc------------------CCcc--ccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHH-HH
Confidence 54444321100 0000 124579999999999998844 44444433 34444443 44
Q ss_pred HHHh---------cCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 281 QIYV---------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~---------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|. -+|.|||+|.-||||..| ++.+|.|||++..+++.
T Consensus 322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D--lTccIaDFGLAl~~~p~ 369 (534)
T KOG3653|consen 322 HLHEELPRGDHHKPPIAHRDLKSKNVLVKND--LTCCIADFGLALRLEPG 369 (534)
T ss_pred HhcccCCcCCCCCCccccccccccceEEccC--CcEEeeccceeEEecCC
Confidence 5554 479999999999999976 99999999999988743
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-08 Score=112.47 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=58.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....+++|||++|.++.++.... ....+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--GKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC--CceEEecCccc
Confidence 45568999999999988764422 12344444444333333 678899999999999999999965 89999999988
Q ss_pred cccC
Q 002092 316 KKLS 319 (968)
Q Consensus 316 ~~l~ 319 (968)
..+.
T Consensus 149 ~~~~ 152 (314)
T cd08216 149 VSMI 152 (314)
T ss_pred eeec
Confidence 7654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.1e-08 Score=97.59 Aligned_cols=145 Identities=20% Similarity=0.257 Sum_probs=94.1
Q ss_pred ccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 122 d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+..++-.|.-|.|+++.. +|+..+||-..|.--..-..|.++-+ -...+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr-----------------------------~Rt~~E 60 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTR-----------------------------KRTKQE 60 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHH-----------------------------HHHHHH
Confidence 356788899999999986 79999999654322111112222111 023568
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCC-CCCCHHHHH-hcC-CCH--HHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGI-RLNDCESLE-AFG-VNK--QKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~-~L~~~~~~~-~~~-~~~--~~l~~~l 274 (968)
|+.+.+++.. ++.+|.++. .....|.|||++|- ++.+..... ... .+. ..++..+
T Consensus 61 ar~l~k~~~~------------------GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~i 122 (229)
T KOG3087|consen 61 ARLLAKCRAL------------------GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRI 122 (229)
T ss_pred HHHHHHHHHh------------------CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHH
Confidence 8888887652 688999997 56789999999993 344432211 111 111 1333333
Q ss_pred HHHHHHHHHhcCccccCCCCCceEEecCCCCce--EEEeccccc
Q 002092 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTK 316 (968)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i--~LiDFG~~~ 316 (968)
-+. +.-+|..+++|+|+--.||++.++ ++++ .|||||+..
T Consensus 123 G~~-igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 123 GEL-IGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSS 164 (229)
T ss_pred HHH-HHHhhhCCeecccccccceEEecC-CCcCceEEEeecchh
Confidence 333 556799999999999999999875 2444 899999854
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.7e-08 Score=104.00 Aligned_cols=145 Identities=23% Similarity=0.295 Sum_probs=89.5
Q ss_pred ccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 122 d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+-+|++.|..++||+++..+|+.++||+.+++... ....++..|
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~------------------------------------~~~~~~~~E 45 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL------------------------------------PSAHDVARE 45 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccC------------------------------------cccccHHHH
Confidence 34789999999999999877799999986543210 011245667
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cC-----CCeEEecccCCCCCCCHHH---------------
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS-----ETVLILEFMDGIRLNDCES--------------- 259 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~-----~~vLVmE~i~G~~L~~~~~--------------- 259 (968)
++.+..+++. .+.+|+++. .. ..+++|||++|.++.+...
T Consensus 46 ~~~~~~l~~~------------------~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~ 107 (223)
T cd05154 46 YRVLRALAGT------------------GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARA 107 (223)
T ss_pred HHHHHHhhCC------------------CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHH
Confidence 7777776541 356787765 12 4589999999998876421
Q ss_pred HH----h-cCCCH----------------HHHH---HHH----------HHHHHHHH-------HhcCccccCCCCCceE
Q 002092 260 LE----A-FGVNK----------------QKVV---EEI----------TRAYAHQI-------YVDGFFNGDPHPGNFL 298 (968)
Q Consensus 260 ~~----~-~~~~~----------------~~l~---~~l----------~~~~l~~i-------~~~G~~H~D~hPgNIl 298 (968)
+. . +..+. ..+. +.+ +......+ ...+++|+|+||+||+
T Consensus 108 i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil 187 (223)
T cd05154 108 LADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVL 187 (223)
T ss_pred HHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEE
Confidence 00 0 00000 0000 000 00011111 1368999999999999
Q ss_pred EecCCCCceEEEecccccccCH
Q 002092 299 VSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 299 v~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++.+.++.+.||||+.++.-++
T Consensus 188 ~~~~~~~~~~iID~e~~~~g~~ 209 (223)
T cd05154 188 FHPDEPRVVAVLDWELATLGDP 209 (223)
T ss_pred EcCCCCcEEEEEeccccccCCh
Confidence 9862125678999999876544
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-08 Score=113.47 Aligned_cols=148 Identities=24% Similarity=0.225 Sum_probs=97.7
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
++-||+|-|+.|-.|++ -+|+.|||||+..---+ ++ .. -.+.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD----~~--------------------------st-----~hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD----TL--------------------------ST-----GHLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccc----hh--------------------------hh-----hHHHHH
Confidence 36799999999999986 59999999997532110 00 00 012345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.++-+++ ...|..-+|+. .++.||++|.=+|+.|.|++--...|+.. .+++..+.-+
T Consensus 68 VRCMKLVQH-----------------pNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E-~La~kYF~QI~~ 129 (864)
T KOG4717|consen 68 VRCMKLVQH-----------------PNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNE-DLAKKYFAQIVH 129 (864)
T ss_pred HHHHHHhcC-----------------cCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccH-HHHHHHHHHHHH
Confidence 566665543 22345555555 68899999999999999886444445442 2222222111
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (968)
+.+.|...+||||+||+|+.+=+. -|-++|.|||+.-.+-+..+.
T Consensus 130 AI~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL 175 (864)
T KOG4717|consen 130 AISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKL 175 (864)
T ss_pred HHHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcchh
Confidence 334466789999999999987643 478999999998877655544
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-08 Score=117.65 Aligned_cols=80 Identities=21% Similarity=0.226 Sum_probs=56.6
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH--HHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
...-++|||.+.|.-+-+... ............+.++ .+..+|.+|+||||+||+|||++. ..|.|.|+|||..+
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~--~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~-~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIR--SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG-SAGHLRLTYFGFWS 464 (612)
T ss_pred CceeeeeehhccccHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC-CCCcEEEEEechhh
Confidence 345589999999977654322 2222212332333332 378899999999999999999952 24889999999999
Q ss_pred ccCHH
Q 002092 317 KLSSS 321 (968)
Q Consensus 317 ~l~~~ 321 (968)
.+.++
T Consensus 465 ~~~~~ 469 (612)
T KOG0603|consen 465 ELERS 469 (612)
T ss_pred hCchh
Confidence 98876
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.7e-09 Score=113.06 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=84.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.-||.||||.|-.|..+ +.+.+||||++.++--+ ..|.+.-..-.+.++... -.+
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL~~----kpp------------------- 410 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLALPG----KPP------------------- 410 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheecCC----CCc-------------------
Confidence 57899999999999875 45779999998775311 112211000001111000 000
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCH-HHHHhcCCCHHHHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC-ESLEAFGVNKQKVVEEITRAYAHQ 281 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~-~~~~~~~~~~~~l~~~l~~~~l~~ 281 (968)
-+..+...|+. -.+.+.||||+.|+.|--. .+..+.......+...-+.+-+..
T Consensus 411 -FL~qlHScFQT------------------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFF 465 (683)
T KOG0696|consen 411 -FLVQLHSCFQT------------------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFF 465 (683)
T ss_pred -hHHHHHHHhhh------------------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhh
Confidence 11222222221 1344789999999887532 111111111112222222233556
Q ss_pred HHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+|..||+.||+|-.|||++.+ |.|+|.||||+++
T Consensus 466 Lh~kgIiYRDLKLDNvmLd~e--GHiKi~DFGmcKE 499 (683)
T KOG0696|consen 466 LHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKE 499 (683)
T ss_pred hhcCCeeeeeccccceEeccC--CceEeeecccccc
Confidence 899999999999999999976 9999999999985
|
|
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.6e-08 Score=104.16 Aligned_cols=220 Identities=15% Similarity=0.198 Sum_probs=135.8
Q ss_pred HHHhhcCCCCCHHHH-----HHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhH
Q 002092 88 KQLQDSLPPRPVQEV-----SQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDL 162 (968)
Q Consensus 88 ~~Lqd~~p~~~~~~v-----~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl 162 (968)
++..|.+.--..++| +.+|.+-+... ++.+++ -.|..|--+-||.|+-.+|..+||||-+..|--.-.+|-
T Consensus 113 ~r~kDKaDRATvEqVLDPRTrmvLfrll~RG---~i~~in-GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdR 188 (520)
T KOG2270|consen 113 KRVKDKADRATVEQVLDPRTRMVLFRLLNRG---VIVEIN-GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDR 188 (520)
T ss_pred hhcccchhhhhHHHhcChHHHHHHHHHHhcC---eeeecc-cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhh
Confidence 344454443333333 23444444332 344555 488899999999999999999999998766532111111
Q ss_pred HHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCC
Q 002092 163 KNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET 242 (968)
Q Consensus 163 ~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~ 242 (968)
- +..-.++-.. --..+...++.-|++ .|.+|+.|+.. .++.+|+|+.-..+
T Consensus 189 Y-V~GEfRFRhg-yck~NPRKMVk~WAE---------KE~RNLkRl~~------------------aGIP~PePIlLk~h 239 (520)
T KOG2270|consen 189 Y-VSGEFRFRHG-YCKHNPRKMVKTWAE---------KEMRNLKRLNN------------------AGIPCPEPILLKNH 239 (520)
T ss_pred h-ccceeeeecc-cccCCcHHHHHHHHH---------HHHHHHHHHHh------------------cCCCCCCceeeecc
Confidence 0 0000000000 001233445555553 47889999865 36888999887889
Q ss_pred eEEecccCCCCCCCHHHHHhcCCCH---HHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 243 VLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~~~---~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
||||+|+.+.... ...+....+.. ..+...+++.+-......++||+||.--|+|+- +|++.+||-+.+...+
T Consensus 240 VLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 240 VLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH---DGKLYIIDVSQSVEHD 315 (520)
T ss_pred eEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE---CCEEEEEEccccccCC
Confidence 9999999632211 11222233332 233444444443344568999999999999995 3899999999998887
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 320 SSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 320 ~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
...-..|. ..|...|-..|.++|+.
T Consensus 316 HP~aldFL-------RmDc~NVn~FF~r~gv~ 340 (520)
T KOG2270|consen 316 HPHALDFL-------RMDCNNVNDFFRRLGVA 340 (520)
T ss_pred ChhHHHHH-------HHHHHHHHHHHHHcCCe
Confidence 76655553 44666788899999985
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.4e-07 Score=102.74 Aligned_cols=100 Identities=12% Similarity=0.096 Sum_probs=68.5
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee--ec-------CCCeEEecccCCC-CCCCHHHHH-hcCCC
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QS-------SETVLILEFMDGI-RLNDCESLE-AFGVN 266 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~--~~-------~~~vLVmE~i~G~-~L~~~~~~~-~~~~~ 266 (968)
+.+|.+++.++.+. ++.+|.+. .. ...+||||+++|. +|.++..-. ....+
T Consensus 75 a~rE~~~l~~L~~~------------------GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~ 136 (268)
T PRK15123 75 ADREWRAIHRLHEV------------------GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPD 136 (268)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCC
Confidence 55788899888762 56777773 21 2468999999986 676653210 11111
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEec-----CCCCceEEEeccccc
Q 002092 267 ---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK-----DPPHRPILLDFGLTK 316 (968)
Q Consensus 267 ---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~-----~~~g~i~LiDFG~~~ 316 (968)
...+...+. .++..+|..|++|+|++|+|||++. +++.++.||||+.+.
T Consensus 137 ~~~~~~ll~~la-~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 137 PRLKRMLIKRVA-TMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHHHHH-HHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 123333333 3477889999999999999999984 224689999999884
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.9e-08 Score=109.08 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=55.7
Q ss_pred cCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecc
Q 002092 239 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
....++||||++|.+|.+.... ....++...+...+.++. +..+|..|++|+|++|.||+++. +.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccC
Confidence 3456799999999998765431 112344444444443433 67889999999999999999973 579999999
Q ss_pred ccccc
Q 002092 314 LTKKL 318 (968)
Q Consensus 314 ~~~~l 318 (968)
.+..+
T Consensus 151 ~~~~~ 155 (260)
T cd08222 151 VSRLL 155 (260)
T ss_pred ceeec
Confidence 87665
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-08 Score=108.43 Aligned_cols=146 Identities=17% Similarity=0.176 Sum_probs=91.8
Q ss_pred ccccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 118 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 118 f~~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
..+|| .+-+|.|.||.|-.++-+ +|+-+||||++.++- +..|- +++-
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakdE-----VAHT------------------------ 215 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKDE-----VAHT------------------------ 215 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehHH-----hhhh------------------------
Confidence 34555 378999999999999874 899999999876542 11110 1110
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeee-ee-cCCCeEEecccCCCCCCCHHH-HHhcCCCHHHHHH
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV-IQ-SSETVLILEFMDGIRLNDCES-LEAFGVNKQKVVE 272 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v-~~-~~~~vLVmE~i~G~~L~~~~~-~~~~~~~~~~l~~ 272 (968)
..|.+.+.+.++-|- .--+. +. ..+.+.||||..|+.|.-... .+....++.++.-
T Consensus 216 ---lTE~RVL~~~~HPFL------------------t~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYG 274 (516)
T KOG0690|consen 216 ---LTENRVLQNCRHPFL------------------TSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYG 274 (516)
T ss_pred ---hhHHHHHHhccCcHH------------------HHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhh
Confidence 123333333332111 00000 01 234579999999988763322 1112223334433
Q ss_pred HHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.-+-..+..+|..+++.||+|-+|+|++.| |.|++.|||+|+.
T Consensus 275 aEIvsAL~YLHs~~ivYRDlKLENLlLDkD--GHIKitDFGLCKE 317 (516)
T KOG0690|consen 275 AEIVSALGYLHSRNIVYRDLKLENLLLDKD--GHIKITDFGLCKE 317 (516)
T ss_pred HHHHHHhhhhhhCCeeeeechhhhheeccC--CceEeeecccchh
Confidence 333345788999999999999999999977 9999999999984
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-08 Score=118.10 Aligned_cols=80 Identities=15% Similarity=0.255 Sum_probs=62.7
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
..+.+++||||.|.+|.|..... ..+...+++...-+.. ++.+|..|=+|||+|-+||++++. |.++|.|||..+
T Consensus 84 ~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~--gDvklaDfgvsa 160 (829)
T KOG0576|consen 84 RDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE--GDVKLADFGVSA 160 (829)
T ss_pred hcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc--CceeecccCchh
Confidence 34568999999999999874322 2344455555555544 788999999999999999999976 899999999999
Q ss_pred ccCHH
Q 002092 317 KLSSS 321 (968)
Q Consensus 317 ~l~~~ 321 (968)
+++..
T Consensus 161 qitat 165 (829)
T KOG0576|consen 161 QITAT 165 (829)
T ss_pred hhhhh
Confidence 88754
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.65 E-value=7.2e-08 Score=102.45 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=87.1
Q ss_pred cccccccccceeEEEEEE-eCCCCEEEEEEec--CCh-hhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 121 FVETPLATASIAQVHRAT-LVDGRQVVVKVQH--QGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 121 ~d~~plgsaSigqV~~A~-l~~G~~VAVKV~~--p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
+..+-+|+|.+|.|--++ +.+|.++||||+. |+- +.++.++..++..-
T Consensus 81 Lt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C---------------------------- 132 (463)
T KOG0607|consen 81 LTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC---------------------------- 132 (463)
T ss_pred hHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh----------------------------
Confidence 345789999999999998 4799999999864 332 22222111111100
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH--H
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE--I 274 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~--l 274 (968)
+--.|+-.+-+.|++ .++-|||||-+.|++|-..+. .+.-++..+..+. -
T Consensus 133 ---qgh~nilqLiefFEd------------------------d~~FYLVfEKm~GGplLshI~-~~~~F~E~EAs~vvkd 184 (463)
T KOG0607|consen 133 ---QGHKNILQLIEFFED------------------------DTRFYLVFEKMRGGPLLSHIQ-KRKHFNEREASRVVKD 184 (463)
T ss_pred ---cCCccHHHHHHHhcc------------------------cceEEEEEecccCchHHHHHH-HhhhccHHHHHHHHHH
Confidence 001244444444432 455689999999999865432 2222333332222 2
Q ss_pred HHHHHHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccc
Q 002092 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKK 317 (968)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~ 317 (968)
+...+..+|..||-|||+||+|||..... -.-++|+||-+...
T Consensus 185 ia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 185 IASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 23348889999999999999999997431 12478999976543
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-08 Score=106.24 Aligned_cols=142 Identities=18% Similarity=0.187 Sum_probs=91.9
Q ss_pred ccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 120 DFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 120 ~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.++.+-||.|--|.|-.+.. ++|+..|+||++-.-+.+-+-|+ +|....
T Consensus 64 ~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeL-------Hw~~s~----------------------- 113 (400)
T KOG0604|consen 64 SISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVEL-------HWMASG----------------------- 113 (400)
T ss_pred eehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhh-------hhhhcC-----------------------
Confidence 34557899999999999987 48999999986533221111111 010000
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCC--CeEEecccCCCCCCCHHHHHhc-CCCHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSE--TVLILEFMDGIRLNDCESLEAF-GVNKQKVVE 272 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~--~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~ 272 (968)
....|.|-.||. .+. ..+|||.++|+.|-....-+.. .+..++.++
T Consensus 114 ----------------------------h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~e 165 (400)
T KOG0604|consen 114 ----------------------------HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASE 165 (400)
T ss_pred ----------------------------CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHH
Confidence 112355556664 222 2479999999988665332222 244555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccC
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (968)
.+-++. +..+|..+|-|||+||+|+|.... ++.-++|.|||+++.-.
T Consensus 166 I~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 166 IMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred HHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 544433 778999999999999999999854 23568999999998654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.2e-08 Score=110.01 Aligned_cols=149 Identities=19% Similarity=0.199 Sum_probs=84.9
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
-+|+|+|.||||..|+++ +..+|+||.+.. +++..|.. .. .-++..+- . |
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~DtW-----------vr-DrkLGtVp--------~------E 616 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDTW-----------VR-DRKLGTVP--------S------E 616 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhh---hhhhhhhh-----------hc-ccccCccc--------h------h
Confidence 379999999999999985 677899997653 23333322 10 11111111 1 2
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEeccc-CCCCCCCHHHHHhcCCCHH--HHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFM-DGIRLNDCESLEAFGVNKQ--KVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i-~G~~L~~~~~~~~~~~~~~--~l~~~l~~~ 277 (968)
.+.+.++..+- ...-+.+-..+. ....+|+||-- +|+.|-|++... ..++.. ++.-.-+.+
T Consensus 617 IqIla~l~~~s--------------H~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~a 681 (772)
T KOG1152|consen 617 IQILATLNKHS--------------HENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVA 681 (772)
T ss_pred HHHHHHhhhcC--------------ccchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHh
Confidence 22222222100 001112222222 34457888865 466666664432 122222 122222223
Q ss_pred HHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 278 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
-.+.+|..||+|||+|-+|++++.+ |-++|||||.+.-
T Consensus 682 gi~hlh~~~ivhrdikdenvivd~~--g~~klidfgsaa~ 719 (772)
T KOG1152|consen 682 GIKHLHDQGIVHRDIKDENVIVDSN--GFVKLIDFGSAAY 719 (772)
T ss_pred ccccccccCceecccccccEEEecC--CeEEEeeccchhh
Confidence 3677899999999999999999855 9999999998653
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.5e-08 Score=109.21 Aligned_cols=144 Identities=17% Similarity=0.174 Sum_probs=100.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEec-CChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+-||.|+||.||-++.+ +|+-+|.|-+. ..+++. ..|---.+|
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr-----------------------------------~ge~maLnE 235 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKR-----------------------------------KGETMALNE 235 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHh-----------------------------------hhhHHhhHH
Confidence 57899999999999864 78888887321 111100 011112345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee--e-cCCCeEEecccCCCCCCCH-HHHHhcCCCHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q-SSETVLILEFMDGIRLNDC-ESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~--~-~~~~vLVmE~i~G~~L~~~-~~~~~~~~~~~~l~~~l~~~ 277 (968)
...++++.. ++.|--.| . ....+|||..++|+.|.=. -.+...+++.++..--.+++
T Consensus 236 k~iL~kV~s-------------------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi 296 (591)
T KOG0986|consen 236 KQILEKVSS-------------------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEI 296 (591)
T ss_pred HHHHHHhcc-------------------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHH
Confidence 556665532 23343333 3 4567899999999998732 22333467777766666665
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (968)
+ ++.+|+.+||.||+||+|||+|+. |.+.|.|.|++..+++..+
T Consensus 297 ~cGLehlH~~~iVYRDLKPeNILLDd~--GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 297 ICGLEHLHRRRIVYRDLKPENILLDDH--GHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred HhhHHHHHhcceeeccCChhheeeccC--CCeEeeccceEEecCCCCc
Confidence 5 889999999999999999999976 9999999999999987553
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.3e-07 Score=104.80 Aligned_cols=142 Identities=15% Similarity=0.157 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+-||.|-||.|++|+.+ |+.|||||-..--+..-.++-++.+-++ ++.|
T Consensus 217 e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~SWfrEtEIYqTvm----------------------------LRHE-- 265 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDERSWFRETEIYQTVM----------------------------LRHE-- 265 (513)
T ss_pred EEecCccccceeecccc-CCceEEEEecccchhhhhhHHHHHHHHH----------------------------hccc--
Confidence 46999999999999985 8999999976544433333333222211 1111
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (968)
|+-.|-.. +. ... -..++.+||++|-+-++|.|.. .+.-++.+........+. +..
T Consensus 266 NILgFIaa--D~------------~~~------gs~TQLwLvTdYHe~GSL~DyL--~r~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 266 NILGFIAA--DN------------KDN------GSWTQLWLVTDYHEHGSLYDYL--NRNTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred hhhhhhhc--cc------------cCC------CceEEEEEeeecccCCcHHHHH--hhccCCHHHHHHHHHHHhhhHHH
Confidence 32222210 00 000 0157789999999999999984 445566666555544443 455
Q ss_pred HHh--------cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 282 IYV--------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 282 i~~--------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+|. -.+-|||+|.-||||..+ |.-.|.|+|++...+.
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn--~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIADLGLAVRHDS 368 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEccC--CcEEEeeceeeEEecc
Confidence 553 469999999999999865 8999999999877654
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.5e-08 Score=115.73 Aligned_cols=77 Identities=26% Similarity=0.347 Sum_probs=54.0
Q ss_pred CeEEecccCCCCCCCHHHHH-----hcC-CCHHHHHHHHHHHHHHHHHhcCccccCCCCCceEEec---CCCCceEEEec
Q 002092 242 TVLILEFMDGIRLNDCESLE-----AFG-VNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK---DPPHRPILLDF 312 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-----~~~-~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~---~~~g~i~LiDF 312 (968)
.|++.|.|. .+|.|+.... ..+ ++...+..+++.- +..+|..+++|||+||.||||.. ++..+++|.||
T Consensus 578 ~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~G-laHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 578 LYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASG-LAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHH-HHHHHhcccccccCCCceEEEEccCCCcceeEEeccc
Confidence 589999995 4666664431 011 3333344444432 67889999999999999999985 33356789999
Q ss_pred ccccccCH
Q 002092 313 GLTKKLSS 320 (968)
Q Consensus 313 G~~~~l~~ 320 (968)
|+++.++.
T Consensus 656 glsKkl~~ 663 (903)
T KOG1027|consen 656 GLSKKLAG 663 (903)
T ss_pred ccccccCC
Confidence 99999975
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.2e-08 Score=103.21 Aligned_cols=78 Identities=18% Similarity=0.268 Sum_probs=50.4
Q ss_pred CeEEecccCCCCCCCHHHHHh----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecC--CCCceEEEecc
Q 002092 242 TVLILEFMDGIRLNDCESLEA----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFG 313 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG 313 (968)
-+|+.||.+- .|..++...+ ..+.+..+-..+.+++ +..+|..=++|||+||.||||..| +.|+++|.|||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 3689999872 2222322211 1223333333333333 566778889999999999999854 23899999999
Q ss_pred cccccCH
Q 002092 314 LTKKLSS 320 (968)
Q Consensus 314 ~~~~l~~ 320 (968)
+++.+..
T Consensus 182 laR~~~~ 188 (438)
T KOG0666|consen 182 LARLFNN 188 (438)
T ss_pred HHHHhhc
Confidence 9887654
|
|
| >KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-07 Score=102.02 Aligned_cols=181 Identities=14% Similarity=0.256 Sum_probs=123.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+-||-|--+-||.+...+|++.++|+-|-|-.. ++.++.=-+.+. ..-...|+. ..-+.-.+|..
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS-----FR~Vk~kRDY~r---~r~~~sWly-------LSRlaa~kEfa 162 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRTS-----FRNVKNKRDYLR---KRKSGSWLY-------LSRLAATKEFA 162 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhhh-----HHHhhhhhhhHh---cCCccchhh-------hHHHHHHHHHH
Confidence 468899999999999999999999987755321 111111111111 000111110 11233455666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.++.+.+ .++.||+++.+++++.|||+++|.+|..+.. -.++..+...++.++. -+-
T Consensus 163 fmkaL~e------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~----v~d~~~ly~~lm~~Iv-~la 219 (465)
T KOG2268|consen 163 FMKALYE------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRH----VEDPPTLYDDLMGLIV-RLA 219 (465)
T ss_pred HHHHHHH------------------cCCCCCCcccccceeeHHHhhcccceeeeee----cCChHHHHHHHHHHHH-HHH
Confidence 7777654 2578999999999999999999999987633 2356677777776654 456
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHH-HcCcc
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGLR 351 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~g~~ 351 (968)
.+|+||+|-.--||||+++ +++++|||-.+...+.+.-+.| ..+|.+=|.+.|+ +.|..
T Consensus 220 ~~GlIHgDFNEFNimv~dd--~~i~vIDFPQmvS~sh~nA~~Y-------FdRDv~Ci~~fFrKkf~YE 279 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKDD--DKIVVIDFPQMVSTSHPNAEYY-------FDRDVECIRAFFRKKFGYE 279 (465)
T ss_pred HcCceecccchheeEEecC--CCEEEeechHhhccCCCcccee-------ecccHHHHHHHHHHhcCCC
Confidence 8999999999999999965 8899999999988877655444 3566666666664 34554
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.5e-07 Score=95.66 Aligned_cols=78 Identities=19% Similarity=0.228 Sum_probs=59.4
Q ss_pred CCCeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEec
Q 002092 240 SETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDF 312 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (968)
...+|+..|..-++|.|...... .-++..+++.....++ ++++|... +.|+|+||+||++.++ +.++|.||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~--~~~vl~D~ 173 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS--GLPVLMDL 173 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC--CceEEEec
Confidence 34578888877666666543322 2255677777766666 89999988 9999999999999865 89999999
Q ss_pred ccccccC
Q 002092 313 GLTKKLS 319 (968)
Q Consensus 313 G~~~~l~ 319 (968)
|.+...+
T Consensus 174 GS~~~a~ 180 (302)
T KOG2345|consen 174 GSATQAP 180 (302)
T ss_pred cCccccc
Confidence 9988654
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5e-09 Score=107.38 Aligned_cols=143 Identities=20% Similarity=0.254 Sum_probs=85.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||.|.|+.|||... .+|++.|+|++.-.. .-..|. + ++.+|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k--~~~~~~-----------------------e----------~l~rEa 61 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDF-----------------------Q----------KLEREA 61 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhh--hccccH-----------------------H----------HHHHHH
Confidence 3589999999999986 489999999653110 000010 0 233455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCH---HHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~---~~l~~~l~~~~ 278 (968)
+....+++ ..-+..-+-+. .+-++||.|+++|..|-.-+. .+.-.+. ....++++++
T Consensus 62 rIC~~LqH-----------------P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV-~R~~ySEa~aSH~~rQiLea- 122 (355)
T KOG0033|consen 62 RICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILEA- 122 (355)
T ss_pred HHHHhcCC-----------------CcEeehhhhhcccceeEEEEecccchHHHHHHH-HHHHHHHHHHHHHHHHHHHH-
Confidence 55444332 01122222222 456799999999987753221 1111111 1122222222
Q ss_pred HHHHHhcCccccCCCCCceEEecCCC-CceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 320 (968)
+...|..||+|||+||.|+++....+ .-++|.|||++..+++
T Consensus 123 l~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 123 LAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred HHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 45567899999999999999975422 3588999999999873
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.4e-07 Score=103.66 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=52.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHH--hcCccccCCCCCceEEec-CCCCceEEEecc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--VDGFFNGDPHPGNFLVSK-DPPHRPILLDFG 313 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG 313 (968)
+..-+-|+|||+|-.|+-..+-.. -++.++.-..+.+++ +..+- .--|+|-|+||||||+-. ...|.|+|.|||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 344578999999988875533211 122222222222222 33332 357999999999999853 234789999999
Q ss_pred cccccCHHH
Q 002092 314 LTKKLSSSM 322 (968)
Q Consensus 314 ~~~~l~~~~ 322 (968)
+++.++++.
T Consensus 619 LSKIMdddS 627 (775)
T KOG1151|consen 619 LSKIMDDDS 627 (775)
T ss_pred hhhhccCCc
Confidence 998876643
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.5e-07 Score=99.55 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=66.3
Q ss_pred HHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCC
Q 002092 100 QEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (968)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (968)
+.+++.+++.+|..+.++ ++|+.|.+++||+....+| .++||+.+......
T Consensus 2 ~~~~~~~~~~~~~~~~~~------~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~---------------------- 52 (297)
T PRK10593 2 EQLRAELSHLLGEKLSRV------ECISEQPYAALWALYDSQG-NPMPLMARSFSTPG---------------------- 52 (297)
T ss_pred hHHHHHHHHHhchhhhee------eecCCccceeEEEEEcCCC-CEEEEEecccccch----------------------
Confidence 456677778888655443 7999999999999987556 57889854321110
Q ss_pred CCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c------CCCeEEecccCCC
Q 002092 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGI 252 (968)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLVmE~i~G~ 252 (968)
.+..|+++++.+++. ..+.||+|+. + +..+||||+++|.
T Consensus 53 -----------------~~~~Ea~~L~~L~~~-----------------~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~ 98 (297)
T PRK10593 53 -----------------VAQQEAWKLSMLARS-----------------GTVRMPTVYGVMTHEQSPGPDVLLLERLRGV 98 (297)
T ss_pred -----------------HHHHHHHHHHHHccC-----------------CCCCcCcEEEEeccCCcCCCeEEEEeccCCE
Confidence 245688888887641 2478999995 1 4579999999998
Q ss_pred CCC
Q 002092 253 RLN 255 (968)
Q Consensus 253 ~L~ 255 (968)
++.
T Consensus 99 ~~~ 101 (297)
T PRK10593 99 SVE 101 (297)
T ss_pred ecC
Confidence 773
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.2e-07 Score=107.15 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=54.4
Q ss_pred eEEecccCCCCCCCHHHHHhcCC--CHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 243 VLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~--~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
-+-||-++|++|+++....=.++ +...+.--.-+++ ++.+|+..|||||+|-.|+||..- .|-++|.|||-++++
T Consensus 648 kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRL 726 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRL 726 (1226)
T ss_pred EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhh
Confidence 37999999999998854221112 2222222222222 677889999999999999999864 488999999999877
Q ss_pred C
Q 002092 319 S 319 (968)
Q Consensus 319 ~ 319 (968)
.
T Consensus 727 A 727 (1226)
T KOG4279|consen 727 A 727 (1226)
T ss_pred c
Confidence 4
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1e-07 Score=111.97 Aligned_cols=83 Identities=20% Similarity=0.172 Sum_probs=70.6
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+..-||++|++++.|.|..+..+..+..+.++....++. +..|++++++||||-..||||..- ..+++.|||+++-
T Consensus 770 s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP--~hvkitdfgla~l 847 (1177)
T KOG1025|consen 770 STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP--NHVKITDFGLAKL 847 (1177)
T ss_pred chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC--CeEEEEecchhhc
Confidence 445689999999999999887777788888888887766 888999999999999999999853 6799999999998
Q ss_pred cCHHHHH
Q 002092 318 LSSSMKQ 324 (968)
Q Consensus 318 l~~~~r~ 324 (968)
+.++..+
T Consensus 848 l~~d~~e 854 (1177)
T KOG1025|consen 848 LAPDEKE 854 (1177)
T ss_pred cCccccc
Confidence 8776544
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-07 Score=97.56 Aligned_cols=103 Identities=21% Similarity=0.295 Sum_probs=71.5
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--c------CCCeEEecccCCC-CCCCHHHHHh--cCCC
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S------SETVLILEFMDGI-RLNDCESLEA--FGVN 266 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~------~~~vLVmE~i~G~-~L~~~~~~~~--~~~~ 266 (968)
..+|.+++.++++. ++.+|+++. . ...+|+||+++|. +|.++..... ....
T Consensus 58 a~~E~~~~~~L~~~------------------Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~ 119 (206)
T PF06293_consen 58 AKREWRNLQRLREA------------------GIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQ 119 (206)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhh
Confidence 56788888888762 577888864 1 1348999999984 6666533200 1112
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccC
Q 002092 267 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (968)
Q Consensus 267 ~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (968)
...++..+.+ ++..+|..|++|+|++|+||||+.++ ..++.||||+-+..-.
T Consensus 120 ~~~ll~~l~~-~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 120 RRELLRALAR-LIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHHHH-HHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 3344444444 36788999999999999999999652 2379999999877654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.6e-07 Score=99.87 Aligned_cols=148 Identities=17% Similarity=0.164 Sum_probs=90.7
Q ss_pred cccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhh
Q 002092 117 MFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (968)
Q Consensus 117 ~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (968)
-..+|+ .+-||.||++.|-.+++ ++.+-+|+||.+...- ..| -+++++-.
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~---ndd-----------------edidwvqt-------- 299 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV---NDD-----------------EDIDWVQT-------- 299 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc---CCc-----------------ccchhHHh--------
Confidence 345666 47899999999999998 4778899998764321 111 11111111
Q ss_pred ccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC-ceEeeeeee-cCCCeEEecccCCCCCCCHHH-HHhcCCCHHHHH
Q 002092 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCES-LEAFGVNKQKVV 271 (968)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~-~~~~~~~~~~l~ 271 (968)
| ++ .|+..+ +++ -|-.-..+. .++.+.|.||++|+.|--... .+..+..-.++.
T Consensus 300 ------e-k~------vfe~as----------n~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfy 356 (593)
T KOG0695|consen 300 ------E-KH------VFEQAS----------NNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 356 (593)
T ss_pred ------h-HH------HHHhcc----------CCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhh
Confidence 1 11 111000 011 111112222 466789999999988753221 111111122333
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
..-+-+.+..+|+.|++.||+|-.|+|++.+ |.|+|.|+||+++
T Consensus 357 s~ei~lal~flh~rgiiyrdlkldnvlldae--ghikltdygmcke 400 (593)
T KOG0695|consen 357 SAEICLALNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 400 (593)
T ss_pred hHHHHHHHHHHhhcCeeeeeccccceEEccC--Cceeecccchhhc
Confidence 3344455888999999999999999999976 9999999999985
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.1e-07 Score=93.22 Aligned_cols=78 Identities=27% Similarity=0.342 Sum_probs=55.6
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.-.|.||||++=++|..-. ...|+. .+.+.+++..+ +..+|..++||||+|.+||||=+...-+++|+|||...
T Consensus 95 d~YvF~qE~aP~gdL~snv--~~~GigE~~~K~v~~ql~SA-i~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNV--EAAGIGEANTKKVFAQLLSA-IEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred ceEEEeeccCccchhhhhc--CcccccHHHHHHHHHHHHHH-HHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 4457999999977776542 223333 23445544444 66789999999999999999864334689999999987
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
....
T Consensus 172 k~g~ 175 (378)
T KOG1345|consen 172 KVGT 175 (378)
T ss_pred ccCc
Confidence 6543
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.8e-07 Score=104.31 Aligned_cols=141 Identities=18% Similarity=0.184 Sum_probs=93.8
Q ss_pred ccccccceeEEEEEEeC---CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV---DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~---~G~--~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|-||.||+|+.. .|+ -||||.=+.+... +. . -.|
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-----------------------------d~-t------ekf 438 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-----------------------------DD-T------EKF 438 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-----------------------------hh-H------HHH
Confidence 57899999999999963 344 3788865433210 00 0 025
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
..||-.+++|.+ -+|-+.+. ...-+||||.++=+.|......+...++...+..-..
T Consensus 439 lqEa~iMrnfdH--------------------phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~ 498 (974)
T KOG4257|consen 439 LQEASIMRNFDH--------------------PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCY 498 (974)
T ss_pred HHHHHHHHhCCC--------------------cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHH
Confidence 667766666543 12223332 3445899999987777776554444444444433333
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
++. +..++...|+|||+-..||||... .-++|.|||+++.++++.
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiLVsSp--~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNILVSSP--QCVKLADFGLSRYLEDDA 545 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhheeecCc--ceeeecccchhhhccccc
Confidence 333 667788999999999999999854 579999999999887653
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=8e-07 Score=115.16 Aligned_cols=128 Identities=14% Similarity=0.156 Sum_probs=77.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||||..+..... ...|.
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~ 734 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----------------------------------------PSSEI 734 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----------------------------------------cHHHH
Confidence 5799999999999997 58999999975421100 00122
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....+|||||++|++|.++.. ..+.......+.++. +
T Consensus 735 ~~l~~l~H-----------------pnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L 793 (968)
T PLN00113 735 ADMGKLQH-----------------PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKAL 793 (968)
T ss_pred HHHhhCCC-----------------CCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHH
Confidence 22222211 11122222222 456789999999999987642 233333333333322 5
Q ss_pred HHHH---hcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 280 HQIY---VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 280 ~~i~---~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
..+| ..+++|||+||.||+++.+ +..++ +||..+
T Consensus 794 ~yLH~~~~~~iiH~dlkp~Nil~~~~--~~~~~-~~~~~~ 830 (968)
T PLN00113 794 RFLHCRCSPAVVVGNLSPEKIIIDGK--DEPHL-RLSLPG 830 (968)
T ss_pred HHhccCCCCCeecCCCCHHhEEECCC--CceEE-Eecccc
Confidence 6677 5699999999999999865 44443 355543
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.1e-07 Score=111.13 Aligned_cols=142 Identities=20% Similarity=0.228 Sum_probs=99.9
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+-||.|.||.||+|+.. +-+-||||-++.....+ ...|
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~------------------------------------~~~d 535 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ------------------------------------ARQD 535 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH------------------------------------HHHH
Confidence 57899999999999963 34669999665433221 2347
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc-------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF------------- 263 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~------------- 263 (968)
|++||+-+..|.+. ..|++--|.. ....++|.||+.=++|.++......
T Consensus 536 F~REaeLla~l~H~-----------------nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~ 598 (774)
T KOG1026|consen 536 FRREAELLAELQHP-----------------NIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPP 598 (774)
T ss_pred HHHHHHHHHhccCC-----------------CeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCC
Confidence 88898887776541 1233333322 4556899999998888887543321
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 264 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 264 ~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.++..+++....++. +.+|-.+.||||||--.|.||.+. ..++|.|||+++.+-.
T Consensus 599 ~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~--l~VKIsDfGLsRdiYs 655 (774)
T KOG1026|consen 599 PLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN--LVVKISDFGLSRDIYS 655 (774)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc--eEEEecccccchhhhh
Confidence 134455666666655 666778999999999999999865 7889999999987643
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.6e-06 Score=92.54 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=26.2
Q ss_pred cCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++|+|+||+||+++++ + +.+|||+.+..=
T Consensus 153 ~~~~HgD~~~~Nii~~~~--~-~~iIDwe~a~~G 183 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGK--G-TYWIDLGDFGYG 183 (226)
T ss_pred CceEecCCCCCcEEEcCC--C-cEEEechhcCcC
Confidence 467899999999999854 5 999999988743
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.7e-07 Score=103.36 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=57.0
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCC--HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVN--KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~--~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
-|+.||-|=|+.|.....- +..++ ..++.-..+--.+..+|.+||+.||+||+|+|++.+ |-++|.|||+++.+.
T Consensus 495 vYmLmEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~--Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR--GYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhHHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC--CceEEeehhhHHHhc
Confidence 3689999999999877432 12222 222332233333788999999999999999999976 999999999999875
Q ss_pred HH
Q 002092 320 SS 321 (968)
Q Consensus 320 ~~ 321 (968)
..
T Consensus 572 ~g 573 (732)
T KOG0614|consen 572 SG 573 (732)
T ss_pred cC
Confidence 43
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-05 Score=91.87 Aligned_cols=110 Identities=17% Similarity=0.249 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCC-CEEEEEEecCChhhhhHhhHHHHHHHHHHHH
Q 002092 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (968)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G-~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~ 173 (968)
-++..+.+...+.+..|.- .--...+.++++.|-+..||+.++.+| +.|+||...|.++..-. .
T Consensus 5 ~~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~-~------------ 69 (401)
T PRK09550 5 ETLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGE-S------------ 69 (401)
T ss_pred eeCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccc-c------------
Confidence 3556666666664443311 111234457999999999999999877 59999987654331000 0
Q ss_pred HhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCC
Q 002092 174 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG 251 (968)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G 251 (968)
| .+ -.+ .+..|++.+..+... .+..||+|+. ....+|||||+++
T Consensus 70 w-----pl--~~e----------R~~~Eae~L~~l~~~-----------------~p~~VPkV~~~D~~~~~lVME~L~~ 115 (401)
T PRK09550 70 W-----PL--TLD----------RARIEAEALKIQAKY-----------------VPDLVPKVYHYDEELAVTVMEDLSD 115 (401)
T ss_pred c-----cc--cHH----------HHHHHHHHHHHHHhh-----------------CCCCCCeEEEECCCCCEEEEecCCC
Confidence 0 00 000 134566666666542 2457999997 4557999999997
Q ss_pred CC
Q 002092 252 IR 253 (968)
Q Consensus 252 ~~ 253 (968)
.+
T Consensus 116 ~~ 117 (401)
T PRK09550 116 HK 117 (401)
T ss_pred cc
Confidence 54
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.2e-07 Score=96.49 Aligned_cols=75 Identities=23% Similarity=0.418 Sum_probs=57.5
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+-++|||++++ +|..... ...+-+.+...+.+.+ .+.+|..||+|||+||.||+|..+ ..++++|||.++.-
T Consensus 95 e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~--~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD--CTLKILDFGLARTE 168 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch--hheeeccchhhccc
Confidence 34799999975 4444433 3345566666666655 788999999999999999999866 88999999999876
Q ss_pred CHH
Q 002092 319 SSS 321 (968)
Q Consensus 319 ~~~ 321 (968)
...
T Consensus 169 ~~~ 171 (369)
T KOG0665|consen 169 DTD 171 (369)
T ss_pred Ccc
Confidence 554
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.1e-05 Score=80.41 Aligned_cols=125 Identities=23% Similarity=0.363 Sum_probs=90.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.-||.|..+.||.+..+ |.+||+||||++-... ++..||+
T Consensus 28 ~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~r~---------------------------------------~l~kEak 67 (201)
T COG2112 28 KELAKGTTSVVYLGEWR-GGEVALKVRRRDSPRR---------------------------------------NLEKEAK 67 (201)
T ss_pred hhhhcccccEEEEeecc-CceEEEEEecCCcchh---------------------------------------hHHHHHH
Confidence 56899999999999974 6699999999865421 2445777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.++.+... -..|++|.-++.++.|||++|.+|.++.. +.+++.+...+-++| -+=
T Consensus 68 iLeil~g~-------------------~~~p~vy~yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD 122 (201)
T COG2112 68 ILEILAGE-------------------GVTPEVYFYGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLD 122 (201)
T ss_pred HHHHhhhc-------------------CCCceEEEechhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHH
Confidence 77776542 34689998788888899999999987632 225555555444443 223
Q ss_pred hcCccccCCCCC--ceEEecCCCCceEEEeccccc
Q 002092 284 VDGFFNGDPHPG--NFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 284 ~~G~~H~D~hPg--NIlv~~~~~g~i~LiDFG~~~ 316 (968)
..|+-|..++-+ ||++. ++++.||||-.++
T Consensus 123 ~~GI~H~El~~~~k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 123 RLGIEHGELSRPWKNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred HhccchhhhcCCceeEEec---CCcEEEEEccchh
Confidence 469999999833 66664 2589999998876
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.2e-06 Score=92.54 Aligned_cols=104 Identities=12% Similarity=0.119 Sum_probs=66.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCC-----------
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA-FGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP----------- 303 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~----------- 303 (968)
.+.-+||.|.+ |.++.|...... ..+. .+.++.+++++ +..+|..+++|-|+||+||++....
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence 46667899987 777777643211 1122 23445555554 5567899999999999999985320
Q ss_pred -------CCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCccc
Q 002092 304 -------PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 352 (968)
Q Consensus 304 -------~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~ 352 (968)
+-.|++||||.+..-.+.. ..++.-..-.+-+++..+|+..
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHYRAPEViLgLGwS~ 288 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHYRAPEVILGLGWSQ 288 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc--------ceeeeccccCCchheeccCcCC
Confidence 1347899999987654433 2233223334567888888853
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.9e-05 Score=83.79 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=26.9
Q ss_pred cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++|+|+||+|||++.+ +.+.||||+.++.-+
T Consensus 163 ~~l~HgD~~~~Nil~~~~--~~~~iIDwe~a~~gd 195 (244)
T cd05150 163 LVVTHGDACLPNIIVDPG--KFSGFIDLGRLGVAD 195 (244)
T ss_pred eEEECCCCCCccEEEeCC--cEEEEEEcccccccc
Confidence 459999999999999853 456799999887544
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.9e-05 Score=88.54 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=40.4
Q ss_pred hcCCCCCHHHHHHHHHhh------hCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChh
Q 002092 92 DSLPPRPVQEVSQTIERE------FGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155 (968)
Q Consensus 92 d~~p~~~~~~v~~~l~~e------lg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~ 155 (968)
....+++.+.+...+.+. +|.. +.....++||-|.+..||+... +++.|+||...|.++
T Consensus 4 ~~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~-~~~svVVKqa~p~~r 68 (418)
T PLN02756 4 SEFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS-SSGSFVIKQALPYIR 68 (418)
T ss_pred cccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc-CCccEEEEeCCcccc
Confidence 345566667666666554 3321 2334567899999999999886 456799998777654
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.7e-05 Score=85.05 Aligned_cols=33 Identities=36% Similarity=0.587 Sum_probs=26.5
Q ss_pred cCccccCCCCCceEEecCCCCce-EEEecccccccCH
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSS 320 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~ 320 (968)
.+++|+|+||+||+++. +++ .+|||+.+..=++
T Consensus 164 ~~l~HGD~~~~Nvlv~~---~~i~giIDw~~a~~gDp 197 (235)
T cd05155 164 PVWFHGDLAPGNLLVQD---GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred ceEEeCCCCCCcEEEEC---CCEEEEEeCcccCcCCh
Confidence 56999999999999974 455 6999998765443
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=2e-05 Score=88.61 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEec
Q 002092 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQH 151 (968)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~ 151 (968)
.+.+.++++.++ +.+|- .++ .+-++++.|...++|+....+| .+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQG-EYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCCC-cEEEEEec
Confidence 466778888888 56764 121 1236899999999999987655 68889754
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.16 E-value=1e-05 Score=85.92 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=24.3
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+++|+|+||+|||++++ ++++.||||+.++.-++
T Consensus 165 ~~~~~HgD~~~~Nil~~~~-~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPS-DGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp CEEEE-SS-SGGGEEEESS-TTEEEE--GTT-EEEET
T ss_pred CcEEEEeccccccceeeec-cceeEEEecccceECCH
Confidence 3679999999999999932 36778999999876543
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=98.15 E-value=8.3e-06 Score=89.76 Aligned_cols=90 Identities=26% Similarity=0.454 Sum_probs=58.4
Q ss_pred HHHHHHHHHhhhCCC--ccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhC
Q 002092 99 VQEVSQTIEREFGES--MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 176 (968)
Q Consensus 99 ~~~v~~~l~~elg~~--~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~ 176 (968)
|..|.+.|.+.+|.+ +.+ .+|++.|+|.++|+.. .+++.+-||+....-...
T Consensus 2 w~~i~~~~~~~~~~~~~i~~------~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~------------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITS------IEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDM------------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS-----E------EEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCH-------------------
T ss_pred hHHHHHHHHHHhCCCCceee------eEecCCCChhheEEEE-CCCccEEEEecChhhHHH-------------------
Confidence 567889999999976 333 3799999999999988 688999999876322211
Q ss_pred CCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCC
Q 002092 177 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGI 252 (968)
Q Consensus 177 ~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~ 252 (968)
|..|++.++.+++. ..+.||+|+. .+..+|+|||++..
T Consensus 56 ---------------------f~~Ea~gL~~L~~~-----------------~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 ---------------------FEGEAEGLKALAEA-----------------NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ---------------------HHHHHHHHHHHCHT-----------------TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ---------------------HHHHHHHHHHHHhc-----------------CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 45678888877542 3578999985 45679999999876
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.3e-05 Score=88.82 Aligned_cols=51 Identities=24% Similarity=0.510 Sum_probs=40.6
Q ss_pred cCccccCCCCCceEEecCCCCceEEEe--cccccccCHHHHHHHHHHHHHHHhCCH
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLD--FGLTKKLSSSMKQALAKMFFAAAEGDH 338 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiD--FG~~~~l~~~~r~~~~~l~~a~~~~d~ 338 (968)
..++|+|+||||||++++ .+++|| |+..+.+.=+.=..+.+++.+...++.
T Consensus 227 ~aLlHGDlHtGSI~v~~~---~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~ 279 (409)
T PRK12396 227 QALIHGDLHTGSVFVKND---STKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADA 279 (409)
T ss_pred hhhccCcCCCCCEEecCC---ceEEEcccccccCCcHHHHHHHHHHHHHHHhcCcc
Confidence 568999999999999854 689999 677777766666678888888876543
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=88.05 Aligned_cols=139 Identities=21% Similarity=0.244 Sum_probs=86.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
..+|.|++|+||++... ..+++|+..+...... .....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~----------------------------------~~~~~~~~e~~ 49 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS----------------------------------KEVERFLREIQ 49 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccch----------------------------------hHHHHHHHHHH
Confidence 46889999999999976 8899998876543221 00111233333
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-CCCeEEecccCCCCCCCHHHHHh--cCCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-SETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~-- 278 (968)
.+..+.+. ...+.+=..+.. ...+++||++.|..+.+...... ...........+.+..
T Consensus 50 ~~~~~~~~----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (384)
T COG0515 50 ILASLNHP----------------PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSA 113 (384)
T ss_pred HHHHccCC----------------cceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 32322210 001111111222 22489999999999884432211 0344444444444433
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCC-ceEEEeccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTK 316 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~ 316 (968)
+..+|..|++|||+||.||+++.. + .++++|||++.
T Consensus 114 l~~~H~~~~~hrd~kp~nil~~~~--~~~~~l~dfg~~~ 150 (384)
T COG0515 114 LEYLHSKGIIHRDIKPENILLDRD--GRVVKLIDFGLAK 150 (384)
T ss_pred HHHHHhCCeeccCCCHHHeeecCC--CCeEEEeccCcce
Confidence 568999999999999999999865 5 69999999988
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.4e-05 Score=82.64 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=53.5
Q ss_pred cccccccceeEEEEEEeCC--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~--G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
-+|+..|-...||+....+ ++.|++|+..++... -+|..+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--------------------------------------~~d~~~ 44 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--------------------------------------IIDRER 44 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--------------------------------------eecHHH
Confidence 4688899999999998764 689999986654211 123345
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCC
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 256 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (968)
|.+.+..+... ++ +|+++...+..++|||++|.++..
T Consensus 45 E~~~~~~l~~~------------------gl-~P~v~~~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 45 ELRIHKLLSKH------------------GL-APKLYATFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred HHHHHHHHHhC------------------CC-CCeEEEEeCCcEEEEeeCCCcCCH
Confidence 66666666531 23 688876555679999999988753
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.4e-06 Score=97.61 Aligned_cols=143 Identities=19% Similarity=0.159 Sum_probs=88.0
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
...||-|-+|.||.|+.+ -.-.||||.++.+.-+ ++ .|..|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----------------------------ve----------EFLkE 313 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKE 313 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchh----------------------------HH----------HHHHH
Confidence 368999999999999985 4567999976533210 11 24556
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHH--HHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI--TRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l--~~~ 277 (968)
|..++.+.+-- -|..--|.. .-.-||++|||.-+.|-|...... ..+..-.++... +..
T Consensus 314 AAvMKeikHpN-----------------LVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsS 376 (1157)
T KOG4278|consen 314 AAVMKEIKHPN-----------------LVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISS 376 (1157)
T ss_pred HHHHHhhcCcc-----------------HHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHH
Confidence 66666554310 011101100 122479999998777766543221 111121222222 223
Q ss_pred HHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 278 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
.++++-..+|||||+-..|.||.++ .-+++.|||+++.++.+.
T Consensus 377 aMeYLEkknFIHRDLAARNCLVgEn--hiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 377 AMEYLEKKNFIHRDLAARNCLVGEN--HIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred HHHHHHHhhhhhhhhhhhhcccccc--ceEEeeccchhhhhcCCc
Confidence 3667778999999999999999865 678899999998776543
|
|
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.4e-05 Score=83.89 Aligned_cols=137 Identities=19% Similarity=0.167 Sum_probs=83.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
.++..|-..++|+.. .+|+.++||+..++... -.+|..+|.+
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~-------------------------------------~~~~r~~E~~ 43 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKA-------------------------------------LGVDRQREYQ 43 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCccccc-------------------------------------ccCcHHHHHH
Confidence 367788889999987 47889999975543210 0124556777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCH--------HHH-------Hhc---C-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC--------ESL-------EAF---G- 264 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~--------~~~-------~~~---~- 264 (968)
.+..+... ++ .|+++......+||||++|.++... ..+ ... +
T Consensus 44 ~l~~l~~~------------------g~-~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~ 104 (256)
T TIGR02721 44 ILQALSAL------------------GL-APKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGY 104 (256)
T ss_pred HHHHHHhc------------------CC-CCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCC
Confidence 77776541 22 5888875567899999999887642 010 000 0
Q ss_pred -CCHH-HHHHH---H--------HHHHHHHHH--------hcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 265 -VNKQ-KVVEE---I--------TRAYAHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 265 -~~~~-~l~~~---l--------~~~~l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+.. .+... + ....++.+. ...++|+|+||+||+++.+ + +.||||..++.=++
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~--~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 105 PLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQ--G-LKLIDWEYASDGDI 178 (256)
T ss_pred CCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCC--C-CEEEeccccCcCCH
Confidence 1111 11110 0 001112221 1368999999999999854 4 89999998876544
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=6.1e-06 Score=95.59 Aligned_cols=76 Identities=16% Similarity=0.135 Sum_probs=52.7
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc--CccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~--G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
-++|+|.+.+++|....+ +....+.+.+-...-+++ +..+|.+ -|+|||||..||+|+.. .|.++|.|.|++..
T Consensus 118 in~iTEL~TSGtLr~Y~k-k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRK-KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHH-HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC-cCceeecchhHHHH
Confidence 478999999999987643 222344443333222222 3444443 59999999999999864 69999999999876
Q ss_pred cC
Q 002092 318 LS 319 (968)
Q Consensus 318 l~ 319 (968)
+.
T Consensus 196 ~r 197 (632)
T KOG0584|consen 196 LR 197 (632)
T ss_pred hh
Confidence 54
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.98 E-value=1e-05 Score=98.82 Aligned_cols=79 Identities=14% Similarity=0.145 Sum_probs=59.3
Q ss_pred cCCCeEEecccCCCCCCCHHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec
Q 002092 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (968)
.+..++|+||++.+.|.+.....+ ..+...++.....++. ++.+....++|||+-.-|||+..
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK 453 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC
Confidence 345789999999988877754333 1145555655555555 66677889999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002092 302 DPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (968)
+ ..+++.|||+++...
T Consensus 454 ~--~~~kIaDFGlar~~~ 469 (609)
T KOG0200|consen 454 N--KVIKIADFGLARDHY 469 (609)
T ss_pred C--CEEEEccccceeccC
Confidence 5 678999999998543
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.9e-05 Score=88.80 Aligned_cols=39 Identities=26% Similarity=0.254 Sum_probs=31.1
Q ss_pred cccccc---ccccccccccceeEEEEEEe-CCCCEEEEEEecC
Q 002092 114 MGGMFM---DFVETPLATASIAQVHRATL-VDGRQVVVKVQHQ 152 (968)
Q Consensus 114 ~~~~f~---~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p 152 (968)
+.++|. +.-.+.||=|-|+.|+.|.. .+.+-||+||++-
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS 113 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS 113 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh
Confidence 456665 33457899999999999986 5778999999974
|
|
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00039 Score=77.21 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=26.4
Q ss_pred cCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.+++|+|+||+||+++.+ +.+.||||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~--~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGD--ELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCC--ceEEEeehhhhcC
Confidence 689999999999999854 4467999998875
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >PRK06148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00049 Score=88.73 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=45.2
Q ss_pred HhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCC
Q 002092 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (968)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~ 153 (968)
+....|.++.+++++++++.+|-.- + .++|++ ..-++|+.+..+|+.+++||-+|.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-~------~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-T------ATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-E------EeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 3456788999999999999998642 1 257854 568999999888999999999886
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=2.4e-05 Score=99.15 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=49.7
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
..+++|||.+ .+|.++.......++...+...+.+++ +..+|..||+|||+||.||||+.. |+++++|||++..
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~--~~~k~~d~~~~~~ 129 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSD 129 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEccc--CcEEEeeccccCc
Confidence 3477899874 477776432223355555555444444 778999999999999999999743 5566666655543
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00026 Score=73.70 Aligned_cols=146 Identities=14% Similarity=0.166 Sum_probs=93.1
Q ss_pred ccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 120 ~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
.+|+---+.|+.+.|++-.+ +|+.+=||-|.-.+...+. .| .-+--|.
T Consensus 20 wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r----------------~P---------------~g~ptf~ 67 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVR----------------YP---------------FGRPTIV 67 (216)
T ss_pred eecCCCcCCCCcceEEEEEe-CCcEEEEEeccCccccccc----------------CC---------------CCchHHH
Confidence 44543446799999999876 6778899966422221110 01 0233466
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec--------CCCeEEecccCC-CCCCCHHHHHhcCC---CH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--------SETVLILEFMDG-IRLNDCESLEAFGV---NK 267 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~--------~~~vLVmE~i~G-~~L~~~~~~~~~~~---~~ 267 (968)
+|..++.++.+. ++.||++..+ -+.+||+|-++| .+|.++. ..... +.
T Consensus 68 rE~~~L~~L~~~------------------GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l--~~~~~~~~~~ 127 (216)
T PRK09902 68 REVAVIKELERA------------------GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWY--AQHAVSPYSD 127 (216)
T ss_pred HHHHHHHHHHHc------------------CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHH--hcCCcCCcch
Confidence 788888888762 4567877641 235899999976 3554442 22112 11
Q ss_pred ---HHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 268 ---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 268 ---~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+...+. ..+.++|..|+.|+||-|-||+++.++.-++.||||--++..
T Consensus 128 ~~k~~il~~va-~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 128 EVRQAMLKAVA-LAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHH-HHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 23333333 347889999999999999999998552224999999876654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=97.73 E-value=9.5e-05 Score=80.81 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=30.2
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
...+|..|++|+|++|.|++++.+ |.+.|.||+.+.....
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~~--G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQD--GGVFLGDFSSLVRAGT 197 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-TT--S-EEE--GGGEEETTE
T ss_pred HHHHhhcceEecccceeeEEEcCC--CCEEEcChHHHeecCc
Confidence 556789999999999999999976 9999999998876654
|
|
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00038 Score=78.30 Aligned_cols=50 Identities=24% Similarity=0.462 Sum_probs=35.9
Q ss_pred cCccccCCCCCceEEecCCCCceEEEecccc--cccCHHHHHHHHHHHHHHHhCC
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT--KKLSSSMKQALAKMFFAAAEGD 337 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~--~~l~~~~r~~~~~l~~a~~~~d 337 (968)
..++|+|+||||||++++ .+++|||-++ +...-+.=..+++++.+....+
T Consensus 192 ~~llHGDl~~gNi~~~~~---~~~~iD~e~~~~G~~~~Dlg~~ianL~l~~~~~~ 243 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEH---ETKVIDPEFAFYGPIGFDIGQFIANLFLNALSRD 243 (370)
T ss_pred ceeeeccCCcccEEEcCC---CCEEEcCcccccCchHhhHHHHHHHHHHHHhCcc
Confidence 578999999999999754 5889998654 3433444455777777766544
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00026 Score=79.01 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=28.7
Q ss_pred cCccccCCCCCceEEecC--CCCceEEEecccccccCH
Q 002092 285 DGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (968)
.++.|+|+||+|||++.+ .++.+.||||..++.-++
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 578999999999999842 026799999999886443
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00086 Score=73.80 Aligned_cols=35 Identities=31% Similarity=0.509 Sum_probs=28.3
Q ss_pred cCccccCCCCCceEEecCCCCce-EEEecccccccCHH
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSSS 321 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~~ 321 (968)
..++|+|+||+||+++++ +++ .||||+++..-++.
T Consensus 185 ~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDED--ARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeCC--CCEEEEECcHhcccCCHH
Confidence 458999999999999853 565 59999998866553
|
MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00035 Score=88.62 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=68.0
Q ss_pred CCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCC---CEEEEEEecCChhhhhHhhHHHHHHHHHHH
Q 002092 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWI 172 (968)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G---~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~ 172 (968)
+++.+.+.+.|.+.++. +..-...+.-++++.|....+|+.+..+| ..+++|...++....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 36677777777766532 11111123457899999999999887554 478888765542100
Q ss_pred HHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c------CCCeEE
Q 002092 173 AWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLI 245 (968)
Q Consensus 173 ~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLV 245 (968)
...++.+|++.++.+.. ...+.||+++. | +..++|
T Consensus 81 ---------------------~~~~~~rE~~~l~~L~~-----------------~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 81 ---------------------SAHAVEREYQVLRALGE-----------------HTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred ---------------------cHHHHHHHHHHHHHHhh-----------------cCCCCCCcEEEEecCCCcCCCceEE
Confidence 01134567777777653 13578899885 2 346899
Q ss_pred ecccCCCCCCC
Q 002092 246 LEFMDGIRLND 256 (968)
Q Consensus 246 mE~i~G~~L~~ 256 (968)
|||++|..+.+
T Consensus 123 ME~v~G~~~~~ 133 (822)
T PLN02876 123 MEYLEGRIFVD 133 (822)
T ss_pred EEecCCcccCC
Confidence 99999987653
|
|
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0008 Score=75.31 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=27.1
Q ss_pred cCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.+++|+|+|++||+++.+ +...+|||+.+..-
T Consensus 187 ~~l~HgD~~~~Nvl~~~~--~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGD--SVKGVIDFYFACTD 218 (307)
T ss_pred CccCCCCCCcCcEEEECC--ceEEEeecccccCc
Confidence 799999999999999854 54589999998653
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0011 Score=68.86 Aligned_cols=158 Identities=15% Similarity=0.177 Sum_probs=91.7
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..+||+|+-=-||. +.+....+|||.+|+....... ..++.....+... .+ ++++|.
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~-------~~~~~k~~~~~~~----~~----------~~~~E~ 62 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRP-------FKRWLKRLRPKSR----YR----------QNRREL 62 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEcccccccccc-------chhHHHhhcccch----hH----------HHHHHH
Confidence 46899999866665 3567789999999876111110 0111111111100 11 233444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cC--CCeEEecccC---CCCCCCHHH-HHhcCCCHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS--ETVLILEFMD---GIRLNDCES-LEAFGVNKQKVVEEI 274 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~--~~vLVmE~i~---G~~L~~~~~-~~~~~~~~~~l~~~l 274 (968)
+....+.. . .+.....+|++|. .| ..-+|+|.+. |..-..+.. +...+++. ....+
T Consensus 63 ~~y~~l~~--~------------~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~--~~~~~ 126 (199)
T PF10707_consen 63 RYYKQLSL--R------------RGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE--ELRQA 126 (199)
T ss_pred HHHHHHhh--c------------cCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH--HHHHH
Confidence 44444331 0 1345678999885 22 3468888873 321122222 23334443 44556
Q ss_pred HHHHHHHHHhcCccccCCCCCceEEecCCCC--ceEEEe-cccccccC
Q 002092 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLD-FGLTKKLS 319 (968)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiD-FG~~~~l~ 319 (968)
++-|.+.++.++|+.+|++|+||++....++ +++||| ||....++
T Consensus 127 L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip 174 (199)
T PF10707_consen 127 LDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP 174 (199)
T ss_pred HHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence 6667888899999999999999999865433 589999 78765543
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00025 Score=81.08 Aligned_cols=36 Identities=31% Similarity=0.384 Sum_probs=34.1
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.+++||+||.+|+.+++..++.|+|++|++|.
T Consensus 56 n~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~ 91 (389)
T COG1686 56 NADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVT 91 (389)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHhhccCCCccceec
Confidence 678999999999999999999999999999999875
|
|
| >COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00092 Score=74.99 Aligned_cols=29 Identities=31% Similarity=0.517 Sum_probs=25.1
Q ss_pred ccccCCCCCceEEecCCCCc-eEEEecccccc
Q 002092 287 FFNGDPHPGNFLVSKDPPHR-PILLDFGLTKK 317 (968)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~ 317 (968)
++|+|+||+||+++.+ .. ..+||||-++.
T Consensus 199 iIH~D~~~~NVl~d~~--~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDD--TDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCC--CCeeeEEEcccccc
Confidence 9999999999999965 33 78999998874
|
|
| >PRK15442 beta-lactamase TEM; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.004 Score=68.51 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=34.0
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
..|..|+++|+.|.+++.+++..+++|+++||++|.
T Consensus 57 n~d~~fp~aSt~K~~i~~avl~~v~~g~l~L~~~v~ 92 (284)
T PRK15442 57 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 92 (284)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 568899999999999999999999999999999876
|
|
| >PRK06149 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00091 Score=86.15 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=43.7
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCCh
Q 002092 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (968)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i 154 (968)
+..+....|.++.+++++++++.+|-. .+ -.++++... ++|+.+..+ ..+++||-+|..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~~------~~~L~s~~d-~nf~v~t~~-~~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-GT------LTELGSQQD-RNFRVDSDG-GRFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-eE------EEecCCcCc-ceEEEEecC-CcEEEEeCCccC
Confidence 455667789999999999999999854 12 246765554 789887655 468889988754
|
|
| >COG3001 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0022 Score=66.76 Aligned_cols=94 Identities=20% Similarity=0.327 Sum_probs=66.8
Q ss_pred HHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCC
Q 002092 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178 (968)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~ 178 (968)
|..|-+.+.+.+|.. ++ -+.+++.-|.|-+.|+... +..++-||+..-...
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~----------------------- 52 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQL----------------------- 52 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-CCcceEEEecchhhH-----------------------
Confidence 667888888999875 32 2346788888877777664 557899997542111
Q ss_pred CCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCC
Q 002092 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRL 254 (968)
Q Consensus 179 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L 254 (968)
--|..|+..++.+.+. ..+.||+|+. .+..+|||||++-.++
T Consensus 53 -----------------~~f~AEa~gL~~la~s-----------------~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 53 -----------------SMFTAEADGLELLARS-----------------NTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred -----------------HHHHHHHHHHHHHHhc-----------------CCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 1256788888887752 2589999996 3556999999997777
Q ss_pred C
Q 002092 255 N 255 (968)
Q Consensus 255 ~ 255 (968)
+
T Consensus 99 d 99 (286)
T COG3001 99 D 99 (286)
T ss_pred C
Confidence 6
|
|
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0022 Score=72.92 Aligned_cols=161 Identities=16% Similarity=0.258 Sum_probs=93.3
Q ss_pred HHHHHHHhhhCCCccccc--cccccccccccceeEEEEEEeCC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHH
Q 002092 101 EVSQTIEREFGESMGGMF--MDFVETPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (968)
Q Consensus 101 ~v~~~l~~elg~~~~~~f--~~~d~~plgsaSigqV~~A~l~~-----G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~ 173 (968)
.+.+++.+ ++..|.++. ..++-+|+..|-.-++|+....+ ++.|++|+-.++...
T Consensus 18 ~~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~----------------- 79 (344)
T PLN02236 18 ELKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVEL----------------- 79 (344)
T ss_pred HHHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCe-----------------
Confidence 34455544 555565432 35566789889999999987532 478999987655321
Q ss_pred HhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCC
Q 002092 174 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR 253 (968)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~ 253 (968)
-+|-.+|.+++..+.+. ++ -|+++.....-.|+||++|.+
T Consensus 80 ---------------------~idR~~E~~~~~~l~~~------------------gl-~P~~~~~~~~g~v~efi~g~~ 119 (344)
T PLN02236 80 ---------------------FFDRDDEIRTFECMSRH------------------GQ-GPRLLGRFPNGRVEEFIHART 119 (344)
T ss_pred ---------------------eechHHHHHHHHHHHHc------------------CC-CCceEEEECCceEEEeeCCCC
Confidence 12345577777766542 12 466665333447899999988
Q ss_pred CCCHH--------HH----H---hcC------CC-HHHHHHHH-------------------HHHH---HHHHH-----h
Q 002092 254 LNDCE--------SL----E---AFG------VN-KQKVVEEI-------------------TRAY---AHQIY-----V 284 (968)
Q Consensus 254 L~~~~--------~~----~---~~~------~~-~~~l~~~l-------------------~~~~---l~~i~-----~ 284 (968)
+.... .+ . ... .+ ..++...+ +... ++..+ .
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 76320 00 0 000 00 01110000 0000 11111 2
Q ss_pred cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.|+|+|++|||++++ ++.+.||||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~-~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEE-TRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCC-CCcEEEEeehhccccch
Confidence 478999999999999853 36799999999875443
|
|
| >PRK10793 D-alanyl-D-alanine carboxypeptidase fraction A; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0029 Score=72.83 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=33.0
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|....+||+||.+|+.++++.+++|+++||+.|.
T Consensus 64 nad~~~~pASlTKlMTa~lvleai~~g~l~ld~~v~ 99 (403)
T PRK10793 64 NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 99 (403)
T ss_pred CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 567889999999999999999999999999999874
|
|
| >PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0022 Score=73.44 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=32.3
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCch
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv 560 (968)
++|..+.+||+||.+|+.+++..+++|+++||+.|
T Consensus 54 n~d~~~~pASlTKlMTa~lv~eai~~g~l~ld~~v 88 (388)
T PRK11397 54 NEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88 (388)
T ss_pred CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 56788999999999999999999999999999975
|
|
| >PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0034 Score=72.14 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=32.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..+.+||+||.+|+.++++.+++|+++||+.|.
T Consensus 57 nad~~~~pAS~TKlMTa~v~~e~i~~g~l~ldd~v~ 92 (400)
T PRK10001 57 NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 92 (400)
T ss_pred CcCCCcCchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 567889999999999999999999999999999753
|
|
| >PF00768 Peptidase_S11: D-alanyl-D-alanine carboxypeptidase This is family S11 in the peptidase classification | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0076 Score=64.80 Aligned_cols=54 Identities=26% Similarity=0.356 Sum_probs=41.5
Q ss_pred ccceEEEEEE--cCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 495 ILGIQVCAYK--DGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 495 ~~G~~v~V~~--~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+.+-+..|+. .|++++++ ++|..+.+||+||.+|+.+++..+++|+|++|++|.
T Consensus 9 ~~a~saiv~d~~tG~iL~~k-------------n~~~~~~~ASlTKlmTa~~~le~~~~~~l~~~~~v~ 64 (240)
T PF00768_consen 9 ISAKSAIVMDADTGKILYSK-------------NADEKRPPASLTKLMTAYVVLEAIKNGKLSLDDKVT 64 (240)
T ss_dssp -SSSEEEEEETTTSEEEEEE-------------STTSEBE-GGGHHHHHHHHHHHHHHTTSSTTTCEEE
T ss_pred ccceEEEEEECCCCcChhhc-------------ccCceechhhHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 4444455553 57777632 567889999999999999999999999999998764
|
; InterPro: IPR001967 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). The protein fold of the peptidase domain for members of this family resembles that of D-Ala-D-Ala-carboxypeptidase B, the type example for clan SE. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endo-peptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S27) of serine protease have been identified, these being grouped into 6 clans (SA, SB, SC, SE, SF and SG) on the basis of structural similarity and other functional evidence. Structures are known for four of the clans (SA, SB, SC and SE): these appear to be totally unrelated, suggesting at least four evolutionary origins of serine peptidases and possibly many more []. Not with standing their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C clans have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (SA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Bacterial cell walls are complex structures containing amino acids and amino sugars, with alternating chains of N-acetylglucosamine and N-acetyl-muramic acid units linked by short peptides []: the link peptide in Escherichia coli is L-alanyl-D-isoglutamyl-L-meso-diaminopimelyl-D-alanine. The chains are usually cross-linked between the carboxyl of D-alanine and the free amino group of diaminopimelate. During the synthesis of peptidoglycan, the precursor has the described tetramer sequence with an added C-terminal D-alanine []. D-Ala-D-Ala carboxypeptidase A is involved in the metabolism of cell components []; it is synthesised with a leader peptide to target it to the cell membrane []. After cleavage of the leader peptide, the enzyme is retained in the membrane by a C-terminal anchor. There are three families of serine-type D-Ala-D-Ala peptidase, which are also known as low molecular weight penicillin-binding proteins. Family S11 contains only D-Ala-D-Ala peptidases, unlike families S12 and S13, which contain other enzymes, such as class C beta-lactamases and D-amino-peptidases []. Although these enzymes are serine proteases, some members of family S11 are partially inhibited by thiol-blocking agents [].; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 2BCF_A 1TVF_A 3MFD_B 1ES3_A 1ESI_A 1ES4_A 1ES2_A 1SKF_A 1ES5_A 1J9M_A .... |
| >PRK11768 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0048 Score=69.69 Aligned_cols=54 Identities=20% Similarity=0.170 Sum_probs=36.0
Q ss_pred CCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCCh
Q 002092 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (968)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i 154 (968)
.+....+.+...+++- |-..+.. ..++ .+.-.+||+....+|+.+++|+-+|+.
T Consensus 8 ~~~l~p~~~~~a~~~~-g~~~~~~-----~~~l-~s~eN~vy~v~~~~~~~~vlKv~r~~~ 61 (325)
T PRK11768 8 FQTLTPDLILDALESL-GLRVDGR-----LLAL-NSYENRVYQFGDEDGRRVVAKFYRPER 61 (325)
T ss_pred CCCCChHHHHHHHHHc-CCCCccc-----eEee-ccccceEEEEecCCCCEEEEEEcCccc
Confidence 4556677777777654 5432221 1233 345568999998889999999988763
|
|
| >COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.015 Score=64.84 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=29.5
Q ss_pred cCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..++|+|.|+|||+++++ +.+.+|||+++..=++.
T Consensus 198 ~~lvHGD~~~gNlii~~~--~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPG--RPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeCC--CeeEEEeccccccCCcH
Confidence 479999999999999965 55899999998865553
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0025 Score=70.54 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=45.1
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHH---HHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCC--CceEEEeccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTK 316 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~ 316 (968)
-+|||-.-+ .+|.... .....+.. .++.++++. ..++++||+-|||+|..|||+.-|++ -.+|+.||||+-
T Consensus 318 lylvMkrY~-~tLr~yl--~~~~~s~r~~~~~laQlLEa-v~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 318 LYLVMKRYR-QTLREYL--WTRHRSYRTGRVILAQLLEA-VTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred EEEehhcch-hhHHHHH--hcCCCchHHHHHHHHHHHHH-HHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 478887764 2333332 11122222 223333333 66789999999999999999975433 357899999974
|
|
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.018 Score=65.12 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=27.6
Q ss_pred ccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 287 FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.|.|++|+|||++++ ++++.||||..++.-++
T Consensus 184 ~CHnDl~~~NiL~~~~-~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 184 FAHNDLLSGNLMLNED-EGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEECCCCcccEEEeCC-CCcEEEEcccccCCCcc
Confidence 7999999999999753 36899999999876544
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.00056 Score=84.11 Aligned_cols=36 Identities=28% Similarity=0.252 Sum_probs=30.1
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
+.|+|+.|+.|+|+|-+||||+.= .=+.|.||..-+
T Consensus 133 l~qcH~~gVcHGDIKsENILiTSW--NW~~LtDFAsFK 168 (1431)
T KOG1240|consen 133 LSQCHKLGVCHGDIKSENILITSW--NWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHcCccccccccceEEEeee--chhhhhcccccC
Confidence 889999999999999999999853 446777887644
|
|
| >PRK11669 pbpG D-alanyl-D-alanine endopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.024 Score=62.79 Aligned_cols=41 Identities=34% Similarity=0.486 Sum_probs=32.9
Q ss_pred EcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
..|++++++ ++|..+.+||+||.+|+.+++. ++++||++|.
T Consensus 50 ~tG~vL~~k-------------N~d~~~~pASlTKlmTalvvle----~~l~ld~~v~ 90 (306)
T PRK11669 50 NTNKVIYSS-------------NPDLVVPIASITKLMTAMVVLD----AKLPLDEKLK 90 (306)
T ss_pred CCCcEEEeE-------------CcCCCcCchHHHHHHHHHHHHH----cCCCCCCEEE
Confidence 467777632 5688899999999999999983 5789998774
|
|
| >PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties [] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.014 Score=63.15 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=27.6
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCCh
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i 154 (968)
.++..|+.+.|++++..||+++++|+..|.-
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc
Confidence 4678899999999999999999999988754
|
Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0049 Score=74.95 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=47.9
Q ss_pred ecccCCCCCCCHHHHHhcCCCHHH---HHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 246 LEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 246 mE~i~G~~L~~~~~~~~~~~~~~~---l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
||||++ .|..+.... ..+...+ ...+++.- ++.+|..|+-|||+||.|+++... |.++++|||.+..+.
T Consensus 400 mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~G-v~y~h~~GiahrdlK~enll~~~~--g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRG-VKYLHSMGLAHRDLKLENLLVTEN--GILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHH-HHHHHhcCceeccCccccEEEecC--CceEEeecCcceeec
Confidence 999999 776653311 1122222 22222221 577889999999999999999966 899999999876553
|
|
| >KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.021 Score=62.20 Aligned_cols=111 Identities=14% Similarity=0.218 Sum_probs=73.7
Q ss_pred ceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCc
Q 002092 230 DVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (968)
Q Consensus 230 ~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (968)
++.+|.|..-.++||||.|+.-.-+.. .++....+. .......+..++.+..++.-++|+|+.--|+|... |+
T Consensus 346 GlpcP~vV~lkkhvLVMsFiGd~~~aA-PkLK~v~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~---gK 421 (531)
T KOG2269|consen 346 GLPCPQVVKLKKHVLVMSFIGDQGLAA-PKLKNVELTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTP---GK 421 (531)
T ss_pred CCCCCceeeeecceEEEEeecCCCCCC-ccccccccChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecC---Cc
Confidence 567788877788999999994222211 011111111 23344555555556666788999999999999974 69
Q ss_pred eEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 307 PILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 307 i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
+.+||-..+...+...-.. .+.+|-..|...|...|..
T Consensus 422 vw~IDVsQsvep~HP~~Le-------FL~RDc~Ni~~FF~r~G~p 459 (531)
T KOG2269|consen 422 VWVIDVSQSVEPSHPRSLE-------FLTRDCQNIITFFTRIGTP 459 (531)
T ss_pred eEEEechhccCCCCcchhH-------HHHHHHHHHHHHHHhcCCC
Confidence 9999998877665433222 2456777788888888875
|
|
| >PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2 | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.026 Score=59.34 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=22.4
Q ss_pred cCccccCCCCCceEE-ecCCCCceEEEecccccccCH
Q 002092 285 DGFFNGDPHPGNFLV-SKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv-~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.|.|++|+|||+ .. ++++.||||-.++.-+.
T Consensus 143 ~v~cHnDl~~~Nil~~~~--~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNK--DGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETSS--SSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEeccC--CCeEEEecHHHHhhccc
Confidence 478999999999999 43 37999999998876543
|
7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B .... |
| >PTZ00384 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.16 Score=58.61 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHhhhCCCcccc-ccccccccccccceeEEEEEEeCCC--CE-----EEEEEecCChhhhhHhhHHHHHHH
Q 002092 97 RPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVDG--RQ-----VVVKVQHQGIKTIILEDLKNAKSI 168 (968)
Q Consensus 97 ~~~~~v~~~l~~elg~~~~~~-f~~~d~~plgsaSigqV~~A~l~~G--~~-----VAVKV~~p~i~~~~~~Dl~~l~~l 168 (968)
.....+++++.+-.+ .|.++ -..+.-+|+..|--.++|++...++ .. |++.+--.+..
T Consensus 29 ~~~~~~~~~~~~~~p-~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~------------- 94 (383)
T PTZ00384 29 HSHSNLKSLCIRHVP-FWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNS------------- 94 (383)
T ss_pred ccHHHHHHHHHHHCC-ccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCc-------------
Confidence 456677778776665 45433 1345667898899999999986433 22 44443111100
Q ss_pred HHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecc
Q 002092 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (968)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~ 248 (968)
.-+|-.+|.+.+..+.+. -.-|+++......++.||
T Consensus 95 -------------------------l~IdR~~E~~i~~~Ls~~-------------------glgP~l~~~f~~g~l~ef 130 (383)
T PTZ00384 95 -------------------------LVIDNDLQYNIAKLLGDN-------------------NFGPKIIGRFGDFTIQEW 130 (383)
T ss_pred -------------------------eEeccHHHHHHHHHHHhC-------------------CCCCeEEEecCCEEEEEE
Confidence 112344566666666542 235777776677899999
Q ss_pred cCCCCCCC
Q 002092 249 MDGIRLND 256 (968)
Q Consensus 249 i~G~~L~~ 256 (968)
++|.+++.
T Consensus 131 IeGr~l~~ 138 (383)
T PTZ00384 131 VEGNTMGI 138 (383)
T ss_pred eccccCCh
Confidence 99998864
|
|
| >PTZ00296 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.3 Score=57.37 Aligned_cols=114 Identities=13% Similarity=0.111 Sum_probs=70.4
Q ss_pred HHHHHHHhhc-CCCCCHHHHHHHHHhhhCCCcccc-ccccccccccccceeEEEEEEeCC---------CCEEEEEEecC
Q 002092 84 ISLLKQLQDS-LPPRPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQ 152 (968)
Q Consensus 84 ~~~L~~Lqd~-~p~~~~~~v~~~l~~elg~~~~~~-f~~~d~~plgsaSigqV~~A~l~~---------G~~VAVKV~~p 152 (968)
.++|+.+... .+-...+.+..++.+..+. |..+ -.+++-+||..|=--++|+....+ ++.|+|+|-.+
T Consensus 70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp~-W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~ 148 (442)
T PTZ00296 70 KNDIPLCAQEFSDLTDPLYIKKICLEKVPE-WRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK 148 (442)
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHCCc-cccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence 3444444444 4445566677777655432 3321 124566899889889999998642 56899998766
Q ss_pred ChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceE
Q 002092 153 GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVL 232 (968)
Q Consensus 153 ~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 232 (968)
+.+..+ |-..|..+...+.+. + .
T Consensus 149 ~te~lI--------------------------------------dR~~E~~v~~~ls~~-g------------------i 171 (442)
T PTZ00296 149 DVDELY--------------------------------------NPISEFEVYKTMSKY-R------------------I 171 (442)
T ss_pred Ccccee--------------------------------------CHHHHHHHHHHHHHC-C------------------C
Confidence 654222 334466666666541 1 1
Q ss_pred eeeeeecCCCeEEecccCCCCCC
Q 002092 233 IPEVIQSSETVLILEFMDGIRLN 255 (968)
Q Consensus 233 vP~v~~~~~~vLVmE~i~G~~L~ 255 (968)
-|+++.....+.+.||++|.++.
T Consensus 172 ~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 172 APQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred CCceEEEeCCCEEEEeeCCccCC
Confidence 35566555677899999998665
|
|
| >PRK10271 thiK thiamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.023 Score=58.29 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=27.8
Q ss_pred cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.-..|+|+||+||+++++ | ++||||+.++.-++
T Consensus 77 ~~p~H~D~~~~N~~~~~~--~-~~lIDwe~a~~gDp 109 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSAS--G-LRLIDWEYAGDGDI 109 (188)
T ss_pred eeeecCCCCCccEEEECC--C-EEEEeCCcccCCCH
Confidence 456999999999999753 4 99999999987665
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.022 Score=67.08 Aligned_cols=96 Identities=20% Similarity=0.136 Sum_probs=65.0
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH--HHHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.++.+|+++|+.|..+-..... ....+.......+++. -+.++|..|++|+|+|+.||+++.+ |.|++.|||..+
T Consensus 69 ~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~--Ghi~~tdfglsk 145 (612)
T KOG0603|consen 69 DGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE--GHIKLTDFGLSK 145 (612)
T ss_pred ccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--CccccCCchhhh
Confidence 6788999999999766433211 1111222222223332 2778889999999999999999966 999999999988
Q ss_pred ccCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002092 317 KLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (968)
Q Consensus 317 ~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 347 (968)
.+-+.... +++++.++..+..
T Consensus 146 e~v~~~~~----------cgt~eymApEI~~ 166 (612)
T KOG0603|consen 146 EAVKEKIA----------CGTYEYRAPEIIN 166 (612)
T ss_pred HhHhhhhc----------ccchhhhhhHhhh
Confidence 77665544 5566555555544
|
|
| >PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.68 Score=53.96 Aligned_cols=45 Identities=22% Similarity=0.403 Sum_probs=31.6
Q ss_pred ccccCCCCCceEEecCCCCc--e-EEEecccccccCHHHHHHHHHHHHHH
Q 002092 287 FFNGDPHPGNFLVSKDPPHR--P-ILLDFGLTKKLSSSMKQALAKMFFAA 333 (968)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~--i-~LiDFG~~~~l~~~~r~~~~~l~~a~ 333 (968)
++|+|+...|||.+.+++|+ + .||||=++..-++ -..+++++..+
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~--~eDl~Rll~~~ 317 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP--AEDLARLLVSC 317 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch--HHHHHHHHHhc
Confidence 79999999999999865553 3 4899988766543 33455555443
|
In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO). |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.0099 Score=68.58 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=51.4
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHHh----cCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV----DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~----~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
-++.|++|+-.+|.++..-+..+-.+. . .+..-.++|+-. .|.+|+|+||.||+...+ .+++|.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s-~--s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d--~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERS-L--SLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDD--DQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccc-h--hHHHHHHHhhccchhhccchhhhccccccccccc--hhhhhhhhhheee
Confidence 478999999989988854222221111 1 111112223321 899999999999999866 6899999999987
Q ss_pred cCHHH
Q 002092 318 LSSSM 322 (968)
Q Consensus 318 l~~~~ 322 (968)
.+...
T Consensus 406 ~~~~~ 410 (516)
T KOG1033|consen 406 QDKDE 410 (516)
T ss_pred cccCC
Confidence 76544
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.06 Score=55.71 Aligned_cols=85 Identities=18% Similarity=0.226 Sum_probs=56.1
Q ss_pred EeeeeeecCCCeEEecccCCCCCCCH----HHHHhcC-CCHHHHHHHHHHHHHHHHHh---cCccccCCCCCceEEecCC
Q 002092 232 LIPEVIQSSETVLILEFMDGIRLNDC----ESLEAFG-VNKQKVVEEITRAYAHQIYV---DGFFNGDPHPGNFLVSKDP 303 (968)
Q Consensus 232 ~vP~v~~~~~~vLVmE~i~G~~L~~~----~~~~~~~-~~~~~l~~~l~~~~l~~i~~---~G~~H~D~hPgNIlv~~~~ 303 (968)
.+|+++.+..++++.||+...++... ....... ..+.+++..++++. +.+.. ..+.-+|.+|+|+-|+++
T Consensus 21 ~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~~~- 98 (188)
T PF12260_consen 21 PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVNDD- 98 (188)
T ss_pred CCCCeeeECCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEeCC-
Confidence 79999987778899999987655311 0110000 11334555555543 23332 458889999999999965
Q ss_pred CCceEEEecccccccC
Q 002092 304 PHRPILLDFGLTKKLS 319 (968)
Q Consensus 304 ~g~i~LiDFG~~~~l~ 319 (968)
|+++++|...+...+
T Consensus 99 -~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 99 -GRLKLIDLDDVFVED 113 (188)
T ss_pred -CcEEEEechhcchhH
Confidence 899999999876543
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.51 Score=52.84 Aligned_cols=65 Identities=20% Similarity=0.172 Sum_probs=42.4
Q ss_pred hhhCCCcc-ccccccccccccccceeEEEEEEeCCCCEEEEEEecCChh-hhhHhhHHHHHHHHHHH
Q 002092 108 REFGESMG-GMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWI 172 (968)
Q Consensus 108 ~elg~~~~-~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~-~~~~~Dl~~l~~l~~~~ 172 (968)
+.-|.+.. --+..++..|++.+..+-++.|++++...++=++..-+.+ .....|-.+++.+..+.
T Consensus 143 rrk~~~sQ~~ns~~kk~~pvpDqvs~dk~Q~k~~~stsl~~l~s~~~l~~n~~d~d~~nl~QI~q~~ 209 (488)
T COG5072 143 RRKGPFSQFVNSQTKKICPVPDQVSSDKIQAKLADSTSLVSLVSPFGLPGNAQDADVLNLVQILQWC 209 (488)
T ss_pred hccCCcchhccccccccccCcccchhhhhhhhhccCcceeeccccccCCCCccccchHHHHHHHHHh
Confidence 44454222 2345566789999999999999998888887776543322 23455666666665554
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.036 Score=67.49 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=54.3
Q ss_pred cCCCeEEecccCCCCCCCHH-HHHhcCCC---HHHHHHHHHHHHHHHHH-hcCccccCCCCCceEEecCCCC-ceEEEec
Q 002092 239 SSETVLILEFMDGIRLNDCE-SLEAFGVN---KQKVVEEITRAYAHQIY-VDGFFNGDPHPGNFLVSKDPPH-RPILLDF 312 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~-~~~~~~~~---~~~l~~~l~~~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g-~i~LiDF 312 (968)
....++.+|+.+|..+.+.. .-...+.+ .......+... +..+| ..|+.|+|++|.|.+++.. + .+++.||
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~-l~~~H~~~~~~h~~ikP~n~~l~~s--~~~l~~~df 169 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSG-LSYLHPENGVTHRDIKPSNSLLDES--GSALKIADF 169 (601)
T ss_pred CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccC-ccccCcccccccCCCCCccchhccC--CCcccCCCc
Confidence 45678999999998887764 21111222 12222222221 55567 7899999999999999865 6 8999999
Q ss_pred ccccccCH
Q 002092 313 GLTKKLSS 320 (968)
Q Consensus 313 G~~~~l~~ 320 (968)
|++..+..
T Consensus 170 ~~At~~~~ 177 (601)
T KOG0590|consen 170 GLATAYRN 177 (601)
T ss_pred hhhccccc
Confidence 99987765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 968 | ||||
| 3zyt_A | 372 | Structure Determination Of Esta From Arthrobacter N | 7e-15 | ||
| 2qmi_A | 447 | Structure Of The Octameric Penicillin-Binding Prote | 1e-12 | ||
| 1ci9_A | 392 | Dfp-Inhibited Esterase Estb From Burkholderia Gladi | 4e-12 | ||
| 2wzx_A | 371 | Amp-C Beta-Lactamase (Pseudomonas Aeruginosa)in Com | 9e-08 | ||
| 3s1y_A | 371 | Amp-C Beta-Lactamase (Pseudomonas Aeruginosa) In Co | 9e-08 | ||
| 2qz6_A | 358 | First Crystal Structure Of A Psychrophile Class C B | 8e-07 | ||
| 1l0f_A | 358 | X-Ray Crystal Structure Of Ampc N152h Mutant Beta-L | 1e-06 | ||
| 2dns_A | 363 | The Crystal Structure Of D-Amino Acid Amidase From | 2e-06 | ||
| 1bls_A | 361 | Crystallographic Structure Of A Phosphonate Derivat | 2e-06 | ||
| 2q9m_A | 359 | 4-Substituted Trinems As Broad Spectrum-Lactamase I | 2e-06 | ||
| 3o3v_A | 335 | Crystal Structure Of Clbp Peptidase Domain Length = | 2e-06 | ||
| 1rgz_A | 363 | Enterobacter Cloacae Gc1 Class C Beta-Lactamase Com | 2e-06 | ||
| 1gce_A | 364 | Structure Of The Beta-Lactamase Of Enterobacter Clo | 2e-06 | ||
| 1fr1_A | 361 | Refined Crystal Structure Of Beta-Lactamase From Ci | 2e-06 | ||
| 3s4x_A | 367 | Crystal Structure Of The Asn152gly Mutant Of P99 Be | 2e-06 | ||
| 1i5q_A | 358 | Crystal Structure Of The E. Coli Ampc Beta-Lactamas | 3e-06 | ||
| 3iwi_A | 361 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 3e-06 | ||
| 1fsw_A | 358 | Ampc Beta-Lactamase From E. Coli Complexed With Inh | 3e-06 | ||
| 3iwq_B | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 3e-06 | ||
| 2ffy_B | 358 | Ampc Beta-Lactamase N289a Mutant In Complex With A | 3e-06 | ||
| 2p9v_A | 358 | Structure Of Ampc Beta-Lactamase With Cross-Linked | 3e-06 | ||
| 1pi4_A | 358 | Structure Of N289a Mutant Of Ampc In Complex With S | 3e-06 | ||
| 3ixd_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 3e-06 | ||
| 2bls_A | 358 | Ampc Beta-Lactamase From Escherichia Coli Length = | 3e-06 | ||
| 3iwo_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 3e-06 | ||
| 1zc2_A | 361 | Crystal Structure Of Plasmid-Encoded Class C Beta-L | 4e-06 | ||
| 1hvb_A | 349 | Crystal Structure Of Streptomyces R61 Dd-Peptidase | 4e-06 | ||
| 1sde_A | 347 | Toward Better Antibiotics: Crystal Structure Of D-A | 4e-06 | ||
| 2zj9_A | 355 | X-Ray Crystal Structure Of Ampc Beta-Lactamase (Amp | 4e-06 | ||
| 1y54_A | 361 | Crystal Structure Of The Native Class C Beta-Lactam | 4e-06 | ||
| 1s6r_A | 359 | 908r Class C Beta-Lactamase Bound To Iodo-Acetamido | 4e-06 | ||
| 1rgy_A | 360 | Citrobacter Freundii Gn346 Class C Beta-Lactamase C | 5e-06 | ||
| 2zc7_A | 359 | Crystal Structure Of Class C Beta-Lactamase Act-1 L | 5e-06 | ||
| 3fkv_A | 358 | Ampc K67r Mutant Complexed With Benzo(B)thiophene-2 | 6e-06 | ||
| 3ozh_A | 351 | Crystal Structure Of Beta-LactamaseD-Alanine Carbox | 6e-06 | ||
| 1l0e_A | 358 | X-Ray Crystal Structure Of Ampc K67q Mutant Beta-La | 8e-06 | ||
| 1kvl_A | 358 | X-Ray Crystal Structure Of Ampc S64g Mutant Beta-La | 1e-05 | ||
| 1l0d_A | 358 | X-Ray Crystal Structure Of Ampc S64d Mutant Beta-La | 1e-05 | ||
| 3ixg_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 1e-05 | ||
| 4gdn_A | 342 | Structure Of Fmta-Like Protein Length = 342 | 3e-05 | ||
| 3hlc_A | 432 | Simvastatin Synthase (Lovd) From Aspergillus Terreu | 6e-05 | ||
| 1fcm_A | 358 | Crystal Structure Of The E.Coli Ampc Beta-Lactamase | 6e-05 | ||
| 3hle_A | 432 | Simvastatin Synthase (Lovd), From Aspergillus Terre | 1e-04 | ||
| 3hl9_A | 432 | Simvastatin Synthase (Lovd) From Aspergillus Terreu | 1e-04 |
| >pdb|3ZYT|A Chain A, Structure Determination Of Esta From Arthrobacter Nitroguajacolicus Rue61a Length = 372 | Back alignment and structure |
|
| >pdb|2QMI|A Chain A, Structure Of The Octameric Penicillin-Binding Protein Homologue From Pyrococcus Abyssi Length = 447 | Back alignment and structure |
|
| >pdb|1CI9|A Chain A, Dfp-Inhibited Esterase Estb From Burkholderia Gladioli Length = 392 | Back alignment and structure |
|
| >pdb|2WZX|A Chain A, Amp-C Beta-Lactamase (Pseudomonas Aeruginosa)in Complex With Compound M-02 Length = 371 | Back alignment and structure |
|
| >pdb|3S1Y|A Chain A, Amp-C Beta-Lactamase (Pseudomonas Aeruginosa) In Complex With A Beta- Lactamase Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2QZ6|A Chain A, First Crystal Structure Of A Psychrophile Class C Beta- Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1L0F|A Chain A, X-Ray Crystal Structure Of Ampc N152h Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|2DNS|A Chain A, The Crystal Structure Of D-Amino Acid Amidase From Ochrobactrum Anthropi Sv3 Complexed With D-Phenylalanine Length = 363 | Back alignment and structure |
|
| >pdb|1BLS|A Chain A, Crystallographic Structure Of A Phosphonate Derivative Of The Enterobacter Cloacae P99 Cephalosporinase: Mechanistic Interpretation Of A Beta-Lactamase Transition State Analog Length = 361 | Back alignment and structure |
|
| >pdb|2Q9M|A Chain A, 4-Substituted Trinems As Broad Spectrum-Lactamase Inhibitors: Structure-Based Design, Synthesis And Biological Activity Length = 359 | Back alignment and structure |
|
| >pdb|3O3V|A Chain A, Crystal Structure Of Clbp Peptidase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1RGZ|A Chain A, Enterobacter Cloacae Gc1 Class C Beta-Lactamase Complexed With Transition-State Analog Of Cefotaxime Length = 363 | Back alignment and structure |
|
| >pdb|1GCE|A Chain A, Structure Of The Beta-Lactamase Of Enterobacter Cloacae Gc1 Length = 364 | Back alignment and structure |
|
| >pdb|1FR1|A Chain A, Refined Crystal Structure Of Beta-Lactamase From Citrobacter Freundii Indicates A Mechanism For Beta-Lactam Hydrolysis Length = 361 | Back alignment and structure |
|
| >pdb|3S4X|A Chain A, Crystal Structure Of The Asn152gly Mutant Of P99 Beta-lactamase Length = 367 | Back alignment and structure |
|
| >pdb|1I5Q|A Chain A, Crystal Structure Of The E. Coli Ampc Beta-Lactamase Mutant N152a Covalently Acylated With The Inhibitory Beta-Lactam, Moxalactam Length = 358 | Back alignment and structure |
|
| >pdb|3IWI|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc Omega Loop Insertion (H210aaa) Mutant Beta-Lactamase At 1.64 Angstrom Resolution Length = 361 | Back alignment and structure |
|
| >pdb|1FSW|A Chain A, Ampc Beta-Lactamase From E. Coli Complexed With Inhibitor Cephalothinboronic Acid Length = 358 | Back alignment and structure |
|
| >pdb|3IWQ|B Chain B, X-Ray Crystal Structure Of The Extended-Spectrum Ampc E219k Mutant Beta-Lactamase At 1.84 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2FFY|B Chain B, Ampc Beta-Lactamase N289a Mutant In Complex With A Boronic Acid Deacylation Transition State Analog Compound Sm3 Length = 358 | Back alignment and structure |
|
| >pdb|2P9V|A Chain A, Structure Of Ampc Beta-Lactamase With Cross-Linked Active Site After Exposure To Small Molecule Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|1PI4|A Chain A, Structure Of N289a Mutant Of Ampc In Complex With Sm3, A Phenylglyclboronic Acid Bearing The Cephalothin R1 Side Chain Length = 358 | Back alignment and structure |
|
| >pdb|3IXD|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc V298e Mutant Beta-Lactamase At 2.64 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2BLS|A Chain A, Ampc Beta-Lactamase From Escherichia Coli Length = 358 | Back alignment and structure |
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| >pdb|3IWO|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc Y221g Mutant Beta-Lactamase At 1.90 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|1ZC2|A Chain A, Crystal Structure Of Plasmid-Encoded Class C Beta-Lactamase Cmy-2 Complexed With Citrate Molecule Length = 361 | Back alignment and structure |
|
| >pdb|1HVB|A Chain A, Crystal Structure Of Streptomyces R61 Dd-Peptidase Complexed With A Novel Cephalosporin Analog Of Cell Wall Peptidoglycan Length = 349 | Back alignment and structure |
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| >pdb|1SDE|A Chain A, Toward Better Antibiotics: Crystal Structure Of D-Ala-D-Ala Peptidase Inhibited By A Novel Bicyclic Phosphate Inhibitor Length = 347 | Back alignment and structure |
|
| >pdb|2ZJ9|A Chain A, X-Ray Crystal Structure Of Ampc Beta-Lactamase (Ampc(D)) From An Escherichia Coli With A Tripeptide Deletion (Gly286 Ser287 Asp288) On The H10 Helix Length = 355 | Back alignment and structure |
|
| >pdb|1Y54|A Chain A, Crystal Structure Of The Native Class C Beta-Lactamase From Enterobacter Cloacae 908r Complexed With Brl42715 Length = 361 | Back alignment and structure |
|
| >pdb|1S6R|A Chain A, 908r Class C Beta-Lactamase Bound To Iodo-Acetamido-Phenyl Boronic Acid Length = 359 | Back alignment and structure |
|
| >pdb|1RGY|A Chain A, Citrobacter Freundii Gn346 Class C Beta-Lactamase Complexed With Transition-State Analog Of Cefotaxime Length = 360 | Back alignment and structure |
|
| >pdb|2ZC7|A Chain A, Crystal Structure Of Class C Beta-Lactamase Act-1 Length = 359 | Back alignment and structure |
|
| >pdb|3FKV|A Chain A, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb) Length = 358 | Back alignment and structure |
|
| >pdb|3OZH|A Chain A, Crystal Structure Of Beta-LactamaseD-Alanine Carboxypeptidase From Yersinia Pestis Length = 351 | Back alignment and structure |
|
| >pdb|1L0E|A Chain A, X-Ray Crystal Structure Of Ampc K67q Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1KVL|A Chain A, X-Ray Crystal Structure Of Ampc S64g Mutant Beta-Lactamase In Complex With Substrate And Product Forms Of Cephalothin Length = 358 | Back alignment and structure |
|
| >pdb|1L0D|A Chain A, X-Ray Crystal Structure Of Ampc S64d Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|3IXG|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc T70i Mutant Beta-Lactamase With And Without Benzo(B)thiophene-2- Boronic Acid Bound At 2.14 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|4GDN|A Chain A, Structure Of Fmta-Like Protein Length = 342 | Back alignment and structure |
|
| >pdb|3HLC|A Chain A, Simvastatin Synthase (Lovd) From Aspergillus Terreus, S5 Mutant, Unliganded Length = 432 | Back alignment and structure |
|
| >pdb|1FCM|A Chain A, Crystal Structure Of The E.Coli Ampc Beta-Lactamase Mutant Q120lY150E Covalently Acylated With The Inhibitory Beta-Lactam, Cloxacillin Length = 358 | Back alignment and structure |
|
| >pdb|3HLE|A Chain A, Simvastatin Synthase (Lovd), From Aspergillus Terreus, S5 Mutant, S76a Mutant, Complex With Monacolin J Acid Length = 432 | Back alignment and structure |
|
| >pdb|3HL9|A Chain A, Simvastatin Synthase (Lovd) From Aspergillus Terreus, Unliganded Length = 432 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 968 | |||
| 2qz6_A | 358 | Beta-lactamase; psychrophIle, cold adaptation, ant | 2e-32 | |
| 2wzx_A | 371 | Beta-lactamase; inhibitor, hydrolase, antibiotic r | 2e-32 | |
| 2drw_A | 363 | DAA, D-amino acid amidase; penicillin recognizing | 4e-31 | |
| 2ffy_A | 358 | Beta-lactamase; AMPC, deacylation, transition stat | 6e-31 | |
| 1zkj_A | 359 | CMY-10, extended-spectrum beta-lactamase; plasmid, | 5e-30 | |
| 1ci9_A | 392 | ESTB, protein (carboxylesterase); hydrolase, cabox | 1e-29 | |
| 3o3v_A | 335 | Beta-lactamase, CLBP protein; alpha/beta, disulfid | 3e-29 | |
| 3rju_A | 351 | Beta-lactamase/D-alanine carboxypeptidase; structu | 9e-28 | |
| 1yqs_A | 349 | D-alanyl-D-alanine carboxypeptidase; cell well bio | 1e-27 | |
| 1ei5_A | 520 | D-aminopeptidase, DAP; penicillin binding protein, | 1e-26 | |
| 2qmi_A | 447 | PBP related beta-lactamase; PAB87, octamer, LU-HPD | 2e-26 | |
| 3tg9_A | 356 | Penicillin-binding protein; structural genomics, P | 1e-24 | |
| 3hlc_A | 432 | Transesterase, LOVD; alpha/beta hydrolase fold, tr | 1e-22 | |
| 2dcf_A | 392 | 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1. | 2e-19 | |
| 4gb7_A | 422 | 6-aminohexanoate-dimer hydrolase; structural genom | 1e-18 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-13 | |
| 3i7j_A | 280 | Beta-lactamase MB2281C; alpha-beta protein., struc | 2e-17 |
| >2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} Length = 358 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-32
Identities = 51/279 (18%), Positives = 109/279 (39%), Gaps = 34/279 (12%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
+D+ + + L I G+ V ++G+ + G+ + +P+ ++LF + S
Sbjct: 2 TDIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQY-FNYGVANKDSKQPITENTLFEIGS 60
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 595
V+K TA + + + NGKLKL + + P + + D I + ++ +T+G +
Sbjct: 61 VSKTFTATLAGYALANGKLKLSDPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPEE 120
Query: 596 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 655
S+N + ++ P PG ++LY S G L G + ++ G+ F++++E+
Sbjct: 121 SDNT------GKMISYYQHWKPAFAPGTQRLYSNPSIG-LFGHLAAQSLGQPFEKLMEQT 173
Query: 656 IIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNM 715
++ L G++ + I+ + DK + ++P +
Sbjct: 174 VLPKL---GLKH---------------TFISVPETQMSLYAQGYDKAGKPVRVSPGALDA 215
Query: 716 LNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSR 754
A S L Y + P +
Sbjct: 216 --------EAYGIKTSTSDLIHYVEVNMHPAKLEKPLQQ 246
|
| >2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* 3s1y_A* 3s22_A* Length = 371 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 2e-32
Identities = 53/278 (19%), Positives = 104/278 (37%), Gaps = 33/278 (11%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
++A + + + I G+ V GE S G+ + D R V P++LF + SV
Sbjct: 7 RLKALVDAAVQPVMKANDIPGLAVAISLKGEPHY-FSYGLASKEDGRRVTPETLFEIGSV 65
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K TA + + + K++L++ + WP + + D I + + +T+G + S
Sbjct: 66 SKTFTATLAGYALTQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSV 125
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
+ D + + P PG ++LY S G L G + R+ G+ F+ ++E+ +
Sbjct: 126 QK-----DQAQIRDYYRQWQPTYAPGSQRLYSNPSIG-LFGYLAARSLGQPFERLMEQQV 179
Query: 657 IQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNML 716
L L +D + + + D + + P +
Sbjct: 180 FPAL-------GLEQTHLDVPE---------AALAQYAQGYGKDD--RPLRVGPGPLDA- 220
Query: 717 NIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSR 754
SA L R+ A + P ++
Sbjct: 221 -------EGYGVKTSAADLLRFVDANLHPERLDRPWAQ 251
|
| >2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A* Length = 363 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 4e-31
Identities = 56/276 (20%), Positives = 100/276 (36%), Gaps = 11/276 (3%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
SD+ ++ L + G ++G+ + GE +G +++ P+ D LF + S
Sbjct: 2 SDLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIAS 60
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 595
TK A LH LV +G + L+E I +P+ + V +LNH SGL + +
Sbjct: 61 CTKSFIATGLHLLVQDGTVDLDEPITRWFPDLP--KAAQMPVRILLNHRSGLPDFETSM- 117
Query: 596 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEILEE 654
E ++ + EP Y + G+ L G II +GK + + L
Sbjct: 118 PMISDKSWTAQEIVDFSFRHGVQKEPWHG--MEYSNTGYVLAGMIIAHETGKPYSDHLRS 175
Query: 655 GIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFN 714
I PL G++ + G + +
Sbjct: 176 RIFAPL---GMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTE 232
Query: 715 MLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750
+ A A + + R + ++ AL DG ++
Sbjct: 233 WFPLSGA-NAAGDMVSTPRDIVKFLNALFDGRILDQ 267
|
| >2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} SCOP: e.3.1.1 PDB: 1pi5_A* 1pi4_A* 2hds_A* 1c3b_A* 1fco_A* 1ga9_A* 1iem_A* 1kds_A* 1kdw_A* 1ke0_A* 1ke3_A* 1iel_A 1kvm_A* 1l2s_A* 1ll5_A* 1ll9_A* 1llb_A* 1mxo_A* 1my8_A* 1xgi_A* ... Length = 358 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 6e-31
Identities = 51/295 (17%), Positives = 100/295 (33%), Gaps = 37/295 (12%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
+ + + L KI G+ V G+ + G +PV +LF + SV
Sbjct: 4 QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYY-FTWGYADIAKKQPVTQQTLFELGSV 62
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K T + + G++KL + WPE + + I + H+ +T+G L
Sbjct: 63 SKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGG------LPL 116
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
+ P + + L P PG ++LY S G L G + + SG F++ ++ +
Sbjct: 117 QVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG-LFGALAVKPSGLSFEQAMQTRV 175
Query: 657 IQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNML 716
QPL +L I+ + N + + ++P +
Sbjct: 176 FQPL-------KLNHTWINVPP----AEEKNYA--------WGYREGKAVHVSPGALDA- 215
Query: 717 NIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 771
A + +AR+ + + L + + +
Sbjct: 216 -------EAYGVKSTIEDMARWVQSNLKPLDINE--KTLQQGIQLAQSRYWQTGD 261
|
| >1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} Length = 359 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 5e-30
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
+ + + L + +I G+ V KDG+ + G+ R V +LF + SV
Sbjct: 8 PLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHY-FNYGVANRESGAGVSEQTLFEIGSV 66
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K +TA + + V G ++L++ + P K + D I + + +++G +
Sbjct: 67 SKTLTATLGAYAVVKGAMQLDDKASRHAPWLKGSAFDSITMGELATYSAGGLPLQFPEEV 126
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
++ ++ AP PG + Y S G L G + + + F ++E+ +
Sbjct: 127 DSS------EKMRAYYRQWAPVYSPGSHRQYSNPSIG-LFGHLAASSLKQPFAPLMEQTL 179
Query: 657 IQPL 660
+ L
Sbjct: 180 LPGL 183
|
| >1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A* Length = 392 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-29
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTK 538
A+L + + +++G + GE++ + G+ R RP++ D+LF + SVTK
Sbjct: 19 AARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTK 78
Query: 539 GIT--AGMLHWLVDNGKLKLEENIANIWPEFK----SNGKDLIKVHHVLNHTSGL----- 587
I A + LV G+L L+ + PEF+ + L+ +HH+L HTSGL
Sbjct: 79 PIVALAVLR--LVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLL 136
Query: 588 ---------HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGG 638
+S + + D DE L R+A + PG Y L+ L G
Sbjct: 137 EGAGSVYDRLGISDGIDLRDF----DLDENLRRLASAPLSFAPGSGWQYS-LALDVL-GA 190
Query: 639 IIERASGKKFQEILEEGIIQPL 660
++ERA+G+ ++ + QPL
Sbjct: 191 VVERATGQPLAAAVDALVAQPL 212
|
| >3o3v_A Beta-lactamase, CLBP protein; alpha/beta, disulfide bridge, hydrolase; 2.40A {Escherichia coli} Length = 335 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 3e-29
Identities = 49/298 (16%), Positives = 101/298 (33%), Gaps = 32/298 (10%)
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
+L + + + K+ + V G G+ + D+++ + S++K
Sbjct: 2 RLSTLIHQRMQEAKVPALSVSVTIKGVRQRFV-YGVADVASQKANTLDTVYELGSMSKAF 60
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDL---IKVHHVLNHTSGLHNVSVDLSSE 597
T ++ L+ G+L+ ++I PE + N + + V L HTSGL ++
Sbjct: 61 TGLVVQILIQEGRLRQGDDIITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLEN 120
Query: 598 NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGII 657
++ PG + Y ++ + G +IE +GK F E++ E +
Sbjct: 121 PM----PGSAVAQQLRNENLLFAPGAKFSYASANYD-VLGAVIENVTGKTFTEVIAERLT 175
Query: 658 QPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLN 717
QPL + A++ + D++ + K A
Sbjct: 176 QPLGMS------ATVAVKGDEI--------IVNKASGYKLGFGKPVLFHAPLA------- 214
Query: 718 IRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETS 775
R +PAA H + + + A +P + +P +
Sbjct: 215 --RNHVPAAYIHSTLPDMEIWIDAWLHRKALPATLREAMSNSWRGNSDVPLAADNRIL 270
|
| >3rju_A Beta-lactamase/D-alanine carboxypeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE CIT; 1.50A {Yersinia pestis} PDB: 3ozh_A* Length = 351 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 9e-28
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 478 VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVT 537
+ + + + +G+ + + +V+ S G + +PDSL + S+T
Sbjct: 6 TSQIVDQYAEHIFYNSGAVGMALVVIDNNQVVNR-SFGETQPGNNIRPRPDSLIRIASIT 64
Query: 538 KGITAGMLHWLVDNGKLKLEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVD 593
K +T+ ++ L D+G +KL + + P+ + + K I++ H+ +HTSGL
Sbjct: 65 KLMTSEIMVKLADDGIVKLTDPLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPG 124
Query: 594 LSSENPLLI-CDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEIL 652
+ P+ D + L+ PG + Y L++ L + RA+GK + +L
Sbjct: 125 GPQKRPVFTWPTKDNRWQWLKLAKVTVPPGVKAAYSNLAYD-LLADALSRAAGKPYAHLL 183
Query: 653 EEGIIQPL 660
+ I PL
Sbjct: 184 RDKITAPL 191
|
| >1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A* Length = 349 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-27
Identities = 57/279 (20%), Positives = 100/279 (35%), Gaps = 33/279 (11%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
L+ L + G G V D I S G+ R R + F V SVTK
Sbjct: 9 TGLQAVLHTALSQG-APGAMV-RVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKS 66
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-- 597
+A +L LVD GKL L+ ++ P + + I V V++H SGL++ + D+ ++
Sbjct: 67 FSAVVLLQLVDEGKLDLDASVNTYLPGLLPDDR--ITVRQVMSHRSGLYDYTNDMFAQTV 124
Query: 598 -----NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEI 651
+ + + + PG Y Y + + + G +IE+ +G
Sbjct: 125 PGFESVRNKVFSYQDLITLSLKHGVTNAPGAA--YSYSNTNFVVAGMLIEKLTGHSVATE 182
Query: 652 LEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
+ I PL +LT DT + + + + A +
Sbjct: 183 YQNRIFTPL----------NLT-DTF----YVHPDTVIPGTHANGYLTPDEAGGALVDST 227
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750
+ A S + L +++AL G ++
Sbjct: 228 EQTV----SWAQSAGAVISSTQDLDTFFSALMSGQLMSA 262
|
| >1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} SCOP: b.61.3.1 b.61.3.1 e.3.1.1 Length = 520 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 51/275 (18%), Positives = 93/275 (33%), Gaps = 35/275 (12%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
+ L F+ + + K G V KDGEV++ + G P+ D+ P+ SV+K
Sbjct: 7 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQ 66
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 599
T +L V +L L++ + +F+ V + N+ SGL +
Sbjct: 67 FTCAVLLDAVGEPEL-LDDALEAYLDKFEDER---PAVRDLCNNQSGLRDYWALSVLCGA 122
Query: 600 LLICDW--DECLNRIALSAP-ETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEILEEG 655
+ + + + EPG Y Y + + + +IE +G+ +IL E
Sbjct: 123 DPEGVFLPAQAQSLLRRLKTTHFEPGSH--YSYCNGNFRILADLIEAHTGRTLVDILSER 180
Query: 656 IIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNM 715
I P G++ A L DT ++ +G PA +
Sbjct: 181 IFAPA---GMKR--AELISDTALFDECTGYEGDTVRGFL---------------PATNRI 220
Query: 716 LNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750
+ A S + + +
Sbjct: 221 -----QWMGDAGICASLNDMIAWEQFIDATRDDES 250
|
| >2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} Length = 447 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-26
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
KL F+VE + K+ GI + KDG+V+ G P P++++ + S+TK
Sbjct: 4 GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKS 63
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 599
TA + LV+ G L L++ + + + VHH+L H+SG+ ++ + +
Sbjct: 64 FTALAIMKLVEEGGLSLDDPVEKFVNIKLRPFGEPVTVHHLLTHSSGIPSLGYAEAFIDG 123
Query: 600 LLICDW-------DECLNRIALSAPET--EPGQEQLYHYLSFGW-LCGGIIERASGKKFQ 649
++ D +E + +PG+ + YL+ G+ L G IIE+ SG ++
Sbjct: 124 MVGGDNWLPVSTPEETIAFARDMEKWAVAKPGER--FFYLNTGYVLLGKIIEKVSGVSYE 181
Query: 650 EILEEGIIQPL 660
E +++ I++PL
Sbjct: 182 EYIKKKILEPL 192
|
| >3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans} Length = 356 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-24
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGIT 541
+++ L + D K+ G + K ++ S G R + P + + F + S K T
Sbjct: 3 MKNHLHTIMEDWKLSGTAL-MKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFT 61
Query: 542 AGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL 601
A + LV+ GKL + +++ N + +HH+L HTSG+ + + +++
Sbjct: 62 AIAICQLVEAGKLSFDTPLSDWLDAPFPN----VTIHHLLTHTSGVPDYFDEEITDDFED 117
Query: 602 ICDW---------DECLNRIALSAPETEPGQEQLYHYLSFG-WLCGGIIERASGKKFQEI 651
+ + L + + PG +HY + G L G ++E SG FQE
Sbjct: 118 LWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHR--FHYNNAGFILLGLVVESVSGVTFQEY 175
Query: 652 LEEGIIQPL 660
+E + Q
Sbjct: 176 VEANVFQRA 184
|
| >3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A Length = 432 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 1e-22
Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 30/208 (14%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAY-KDGEVIIDTSAGMLG-----RYDPRPVQPDSLFPV 533
+ + +I G + A G + G P+Q D+ +
Sbjct: 34 VLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPLQVDTPCRL 93
Query: 534 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFK---------SNGKDL-------IKV 577
S TK +T M+ ++ G + L+E + + P+ G I +
Sbjct: 94 ASATKLLTTIMVLQCMERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGKITL 153
Query: 578 HHVLNHTSGL----HNVSVDLSSENPLLICDWDECLNRIALSAP-ETEPGQEQLYHYLSF 632
H+L HTSGL + + L + + P +PG E +Y +
Sbjct: 154 RHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEKFGIQSRL-APPAVNDPGAEWIYG-TNL 211
Query: 633 GWLCGGIIERASGKKFQEILEEGIIQPL 660
W G ++ERA+G ++ L+E I PL
Sbjct: 212 DWA-GKLVERATGLDLEQYLQENICAPL 238
|
| >2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A* Length = 392 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 2e-19
Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 25/201 (12%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
+ A+L D L + V + EV+ + Y PD + +
Sbjct: 64 GAIAAQLPD-LEQRLEQTYTDAFLV--LRGTEVVAE-------YYRA-GFAPDDRHLLMA 112
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL-------- 587
V+K + ++ LVD G++ + + PE + D V VL+ +
Sbjct: 113 VSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISIDYNEDYVD 172
Query: 588 ---HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG-WLCGGIIERA 643
+ D S+ + E + Y S + I+ER
Sbjct: 173 PASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGE--FQYCSANTDVLAWIVERV 230
Query: 644 SGKKFQEILEEGIIQPLSIDG 664
+G ++ E L + L D
Sbjct: 231 TGLRYVEALSTYLWAKLDADR 251
|
| >4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis} Length = 422 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 1e-18
Identities = 28/202 (13%), Positives = 61/202 (30%), Gaps = 34/202 (16%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
L++ L + D ++ +G+++ + RY + S+
Sbjct: 96 GSATPLKELLDDNKTDAFVV------VHNGQLVYE-------RYFN-GYNESEPHGMASL 141
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL---HNVSVD 593
K T ++ L + ++ LE+ E K+ + +++ + +
Sbjct: 142 AKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEH 201
Query: 594 LSSENP-------------LLICDWDECLNRIALSAP-ETEPGQEQLYHYLSFG-WLCGG 638
+ EN D + + A PG + Y +
Sbjct: 202 PALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPPGSV--FSYNNGSTETLAW 259
Query: 639 IIERASGKKFQEILEEGIIQPL 660
II +GK E + E I +
Sbjct: 260 IIRTITGKSLAENVSERIWSQI 281
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 86.8 bits (214), Expect = 2e-17
Identities = 106/686 (15%), Positives = 206/686 (30%), Gaps = 201/686 (29%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWI-KKSKISALWQRAHERNAKRVLNLIIKLEG-- 63
Y+ +SVF A + D K VQ K I K +I + + L + +
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 64 ----------------LWVKL-----------GQYLSTRADVL--------------PEP 82
L + Y+ R D L +P
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRLYNDNQVFAKYNVSRLQP 136
Query: 83 YISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG 142
Y+ L + L L RP + V I G + G +T +A + ++
Sbjct: 137 YLKLRQALL-EL--RPAKNV--LI---DG--VLG----SGKTWVA-LDVCLSYKVQCKMD 181
Query: 143 RQVV-VKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID-EWCKEAPKELDFNS 200
++ + +++ +LE L+ +D + + N + + + L S
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKS 240
Query: 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL 260
+ +E+ L L+L ++ + ++
Sbjct: 241 K---------------PYENC----------L-----------LVL---LNVQ--NAKAW 259
Query: 261 EAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI-LLDFGLTKKLS 319
AF ++ + ++ TR +FL + H + LT
Sbjct: 260 NAFNLSCKILL--TTR--------------FKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 320 SSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRT-SAPANEAF 378
+LL + + + D+P + + + + +
Sbjct: 304 -------------------KSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIAESIRDGL 341
Query: 379 ETVKNLSEQRAKNLKVIQEK--MKLNQKEVKR-FNPVDAFPGDIVIFSRVLNLLRGLSST 435
T N L I E L E ++ F+ + FP I + +L+L+
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 436 MNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEAKLRDFLVELGNDGKI 495
+V ++ +Y L + K+P S I S I+ +++ KL + L I
Sbjct: 402 SDVM----VVVNKLHKYSL---VEKQPKESTISIPS--IYLELKVKLEN-EYALHR--SI 449
Query: 496 LG--IQVCAYKDGEVIIDTSAG----MLGR--YDPRPVQPDSLFP-VF------------ 534
+ + ++I +G + + +LF VF
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 535 -SVTKGITAGMLHWLVDNGKLKL-EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSV 592
S + +L+ L LK + I + P+++ ++ +
Sbjct: 510 DSTAWNASGSILNTLQQ---LKFYKPYICDNDPKYERLVNAIL--DFLPKI--------- 555
Query: 593 DLSSENPLLICDWDECLNRIALSAPE 618
EN LIC L RIAL A +
Sbjct: 556 ---EEN--LICSKYTDLLRIALMAED 576
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 74.9 bits (183), Expect = 1e-13
Identities = 72/546 (13%), Positives = 155/546 (28%), Gaps = 121/546 (22%)
Query: 175 AEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 234
E QY + I+ + D + + + + + + L
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD--AVSGTLRLF- 68
Query: 235 EVIQSSETVLILEFMDGIRLNDCESL-EAFGV-NKQKVVEEITRAYAHQIYVDGFFNGDP 292
+ S + ++ +F++ + + + L +Q +TR Y Q D +N D
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP--SMMTRMYIEQ--RDRLYN-DN 123
Query: 293 HPGNFLVSKDPPHRPILLDFGLTKKLSS----------SM----KQALAKMFFAAAEGDH 338
+K R L + L + K +A +
Sbjct: 124 QV----FAKYNVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVA----LDVCLSY 174
Query: 339 VALLSAFA------EMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLS---EQR 388
+ + + PE +E + L ++ + N+
Sbjct: 175 -KVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 389 AKNLKVIQEKMKLNQ-----KEVKRFNPVDAFPGD--IVIFSRVLNLLRGLSSTMNVRIV 441
L+ + + V+ +AF I++ +R + LS+ I
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 442 YLDIMRPFAEY--------VLQVGINKEPSVSAEWIYSKPIH-SDVEAKLRDFLVELGND 492
L P E + + P S + +RD L N
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPR---EVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 493 GKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPD-SLFPVFSVTKGITAGMLHWLVDN 551
+ ++ II++S +L + R + S+FP S I +L + +
Sbjct: 348 KHVNCDKL------TTIIESSLNVLEPAEYRKMFDRLSVFPP-SAH--IPTILLSLIWFD 398
Query: 552 GKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNR 611
+ N K + L++ T + ++ ++L + + + L+R
Sbjct: 399 VIKSDVMVVVN-----KLHKYSLVE-KQPKESTISIPSIYLELKVK-----LENEYALHR 447
Query: 612 IAL---SAPETEPGQEQL-------------YH----------------YLSFGWLCGGI 639
+ + P+T + + +H +L F +L I
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 640 IERASG 645
R
Sbjct: 508 --RHDS 511
|
| >3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} Length = 280 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 42/267 (15%), Positives = 65/267 (24%), Gaps = 102/267 (38%)
Query: 487 VELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLH 546
+E+ + V+ +F + SVTK + A
Sbjct: 4 LEVLGGWPVPAAAAAVIGPAGVL------------ATHGDTARVFALASVTKPLVARAAQ 51
Query: 547 WLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWD 606
V+ G + L+ G V H+L HTSGL
Sbjct: 52 VAVEEGVVNLDTPA----------GPPGSTVRHLLAHTSGL------------------- 82
Query: 607 ECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVE 666
+ PG ++Y F L ++R SG +F L E + +PL
Sbjct: 83 ----AMHSDQALARPGTRRMYSNYGFTVL-AESVQRESGIEFGRYLTEAVCEPL------ 131
Query: 667 SRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAA 726
G+ + PAA
Sbjct: 132 -----------------GMVT-------TRLDGG-----------------------PAA 144
Query: 727 NGH---CSARALARYYAALADGGVVPP 750
G + LA + L V
Sbjct: 145 AGFGATSTVADLAVFAGDLLRPSTVSA 171
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 968 | |||
| 4gdn_A | 342 | Protein FLP; peptidase, alpha/beta, hydrolase; HET | 100.0 | |
| 3zyt_A | 372 | Esterase A, ESTA; hydrolase, enzymatic promiscuity | 100.0 | |
| 3rju_A | 351 | Beta-lactamase/D-alanine carboxypeptidase; structu | 100.0 | |
| 2drw_A | 363 | DAA, D-amino acid amidase; penicillin recognizing | 100.0 | |
| 1yqs_A | 349 | D-alanyl-D-alanine carboxypeptidase; cell well bio | 100.0 | |
| 2qz6_A | 358 | Beta-lactamase; psychrophIle, cold adaptation, ant | 100.0 | |
| 1zkj_A | 359 | CMY-10, extended-spectrum beta-lactamase; plasmid, | 100.0 | |
| 1ci9_A | 392 | ESTB, protein (carboxylesterase); hydrolase, cabox | 100.0 | |
| 2ffy_A | 358 | Beta-lactamase; AMPC, deacylation, transition stat | 100.0 | |
| 2wzx_A | 371 | Beta-lactamase; inhibitor, hydrolase, antibiotic r | 100.0 | |
| 2qmi_A | 447 | PBP related beta-lactamase; PAB87, octamer, LU-HPD | 100.0 | |
| 3o3v_A | 335 | Beta-lactamase, CLBP protein; alpha/beta, disulfid | 100.0 | |
| 3tg9_A | 356 | Penicillin-binding protein; structural genomics, P | 100.0 | |
| 3hlc_A | 432 | Transesterase, LOVD; alpha/beta hydrolase fold, tr | 100.0 | |
| 1ei5_A | 520 | D-aminopeptidase, DAP; penicillin binding protein, | 100.0 | |
| 2dcf_A | 392 | 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1. | 100.0 | |
| 4gb7_A | 422 | 6-aminohexanoate-dimer hydrolase; structural genom | 100.0 | |
| 3i7j_A | 280 | Beta-lactamase MB2281C; alpha-beta protein., struc | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.88 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.74 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 99.74 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.73 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.72 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.7 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.7 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.69 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.68 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.67 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.67 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.67 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.67 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.66 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.66 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.65 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.65 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.64 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.63 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.6 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.6 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.6 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.58 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.57 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.55 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.54 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.54 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.53 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.52 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.51 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.5 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.49 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.49 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.48 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.48 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.48 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.47 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.47 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.47 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.47 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.47 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.47 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.46 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.46 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.46 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.46 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.46 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.46 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.46 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.46 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.45 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.45 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.44 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.44 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.44 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.44 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.44 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.44 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.44 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.43 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.43 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.43 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.43 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.43 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.43 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.43 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.43 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.42 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.42 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.42 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.42 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.42 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.42 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.42 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.41 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.41 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.41 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.41 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.41 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.41 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.41 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.41 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.4 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.4 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.4 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.4 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.4 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.4 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.4 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.4 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.4 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.4 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.39 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.39 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.39 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.39 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.39 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.39 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.38 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.38 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.38 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.38 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.38 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.38 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.38 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.38 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.38 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.38 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.37 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.37 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.37 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.37 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.37 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.37 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.37 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.37 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.37 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.37 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.37 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.37 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.37 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.37 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.37 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.37 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.37 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.37 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.37 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.37 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.37 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.37 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.37 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.36 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.36 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.36 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.36 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.36 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.36 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.36 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.36 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.36 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.36 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.36 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.36 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.36 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.36 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.35 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.35 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.35 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.35 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.35 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.35 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.35 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.35 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.35 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.35 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.35 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.35 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.35 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.35 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.35 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.34 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.34 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.34 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.34 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.34 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.34 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.34 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.34 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.34 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.34 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.34 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.34 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.34 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.34 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.34 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.34 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.33 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.33 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.33 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.33 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.33 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.33 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.33 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.33 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.33 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.32 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.32 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.32 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.32 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.32 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.32 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.32 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.32 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.32 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.31 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.31 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.31 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.31 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.31 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.31 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.31 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.31 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.31 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.31 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.31 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.3 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.3 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.3 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.3 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.3 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.3 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.3 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.3 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.29 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.29 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.29 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.29 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.29 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.29 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.29 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.28 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.28 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.28 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.28 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.28 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.28 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.28 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.27 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.27 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.27 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.27 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.27 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.26 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.26 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.26 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.26 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.26 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.26 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.26 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.26 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.24 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.24 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.24 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.23 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.22 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.22 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.22 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.21 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.21 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.18 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.15 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.15 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.14 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.14 | |
| 2cc1_A | 262 | Beta-lactamase, penicillinase; hydrolase, antibiot | 99.11 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.1 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.09 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.99 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.97 | |
| 2j9o_A | 298 | TLL2115 protein; penicillin-binding protein, hydro | 98.81 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.79 | |
| 1bsg_A | 266 | Beta lactamase, penicillinase; hydrolase, antibiot | 98.78 | |
| 1hzo_A | 271 | Beta-lactamase; mixed alpha/beta, cephalosporinase | 98.75 | |
| 2qpn_A | 287 | Beta-lactamase GES-1; APO-enzyme, plasmid, hydrola | 98.67 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.66 | |
| 1g6a_A | 271 | Beta-lactamase PSE-4; class A beta-lactamase, carb | 98.62 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.61 | |
| 2p74_A | 263 | Beta-lactamase CTX-M-9A; ultra-high resolution, ac | 98.61 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.59 | |
| 1o7e_A | 276 | L2 beta lactamase; hydrolase, class A; 1.51A {Sten | 98.58 | |
| 1bue_A | 265 | Protein (imipenem-hydrolysing beta-lactamase); hyd | 98.57 | |
| 1m40_A | 263 | TEM-1, beta-lactamase TEM; acylation mechanism, ul | 98.57 | |
| 3c5a_A | 264 | Class A carbapenemase KPC-2; beta-lactamase, C-ter | 98.51 | |
| 1e25_A | 282 | Extended-spectrum beta-lactamase PER-1; hydrolase, | 98.51 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.49 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.49 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.45 | |
| 1n9b_A | 265 | Penicillinase, beta-lactamase SHV-2; beta-lactam h | 98.43 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.41 | |
| 2wk0_A | 265 | Beta-lactamase; hydrolase, iodopenicillanate, anti | 98.41 | |
| 1tvf_A | 369 | PBP4, penicillin binding protein 4; structural gen | 98.37 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.34 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.33 | |
| 1w7f_A | 307 | Beta-lactamase; hydrolase, isocitrate, bacillus li | 98.27 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.25 | |
| 3a3j_A | 344 | PBP5; penicillin binding protein 5, DACA, hydrolas | 98.18 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 98.16 | |
| 3dw0_A | 294 | Class A carbapenemase KPC-2; beta-lactamase, antib | 98.08 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 98.02 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 98.0 | |
| 4ewf_A | 275 | Beta-lactamase; ABA-sandwich, structural genomics, | 97.99 | |
| 3p09_A | 290 | Beta-lactamase; structural genomics, center for st | 97.97 | |
| 4euz_A | 283 | Carbapenem-hydrolizing beta-lactamase SFC-1; carba | 97.97 | |
| 2wuq_A | 318 | BLAB, beta-lactamase regulatory protein BLAB; clas | 97.96 | |
| 1ghp_A | 258 | Beta-lactamase, penicillinase; hydrolase, antibiot | 97.95 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.94 | |
| 4hes_A | 275 | Beta-lactamase class A-like protein; structural ge | 97.94 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.89 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.83 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.81 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.69 | |
| 1es5_A | 262 | DD-transpeptidase; penicillin-binding, serine pept | 97.69 | |
| 1xp4_A | 379 | D-alanyl-D-alanine carboxypeptidase; five-stranded | 97.63 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.59 | |
| 3qhy_A | 271 | Beta-lactamase; enyzme-inhibitor complex, beta-pro | 97.42 | |
| 3ita_A | 352 | D-alanyl-D-alanine carboxypeptidase DACC; ppenicil | 97.32 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 97.31 | |
| 3ny4_A | 265 | Beta-lactamase, penicillinase; penicillin binding | 97.25 | |
| 1alq_A | 266 | CP254 beta-lactamase; hydrolase, circular permuted | 97.24 | |
| 3mzf_A | 363 | D-alanyl-D-alanine carboxypeptidase DACA; beta-lac | 97.24 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.23 | |
| 3hun_A | 453 | Penicillin-binding protein 4; ampicillin, beta-lac | 97.22 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 97.04 | |
| 3lez_A | 260 | Beta-lactamase; antibiotic resistance, halotoleran | 96.99 | |
| 4dxb_A | 637 | RG13, maltose-binding periplasmic protein, beta-la | 96.92 | |
| 3mfd_A | 334 | D-alanyl-D-alanine carboxypeptidase DACB; penicill | 95.32 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.24 | |
| 3cjm_A | 282 | Putative beta-lactamase; NP_815223.1, structural g | 94.74 | |
| 2xep_A | 458 | ORF12; hydrolase; 1.50A {Streptomyces clavuligerus | 93.67 | |
| 2bcf_A | 276 | Probable D-alanyl-D-alanine carboxypeptidase DACB2 | 92.07 | |
| 1cja_A | 342 | Protein (actin-fragmin kinase); transferase; HET: | 91.47 | |
| 3pbt_A | 538 | Penicillin-binding protein 3; PBP3, hydrolase-anti | 84.78 | |
| 3ue3_A | 554 | Septum formation, penicillin binding protein 3, pe | 83.1 | |
| 1qme_A | 702 | Penicillin-binding protein 2X; peptidoglycan synth | 80.15 |
| >4gdn_A Protein FLP; peptidase, alpha/beta, hydrolase; HET: PE4; 3.20A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=441.85 Aligned_cols=246 Identities=17% Similarity=0.262 Sum_probs=193.4
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
.+..+.+++++++.++++.+||++|+|+++|+++++.+||+++.+.+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 9 ~~~~~~id~~i~~~~~~~~~pG~sv~V~~~g~~v~~~~~G~ad~~~~~~~~~~T~f~iaSvtK~~Ta~~i~~Lve~G~l~ 88 (342)
T 4gdn_A 9 NDSQQQIDKIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFTGLAILKLAQEGRLN 88 (342)
T ss_dssp CCSSCSHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCEEECGGGGHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEEEECCEEEEEEEEEEeccCCCCCCCCCCEEeeeeHHHHHHHHHHHHHHHcCCcc
Confidence 34456778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccC---CCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcH
Q 002092 556 LEENIANIWPEFKSN---GKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 632 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~---~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y 632 (968)
||+||++|+|+|+.. ..++|||||||+|||||+++...... ........+++++.+...++.++||+.|.|||.||
T Consensus 89 Ldd~v~~ylP~~~~~~~~~~~~ITir~LL~HtSGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y 167 (342)
T 4gdn_A 89 LNDDVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDA-VTNKNNRLNDVTRAIMGDELHHKPGEEFEYSNMNY 167 (342)
T ss_dssp TTSBGGGTSTTCCCEETTEECCCBHHHHHHTCSCCCCSCTTCSS-CCSSCCCSSCCHHHHHTSCCSSSTTSSCCCCHHHH
T ss_pred hhheeeecCCccccccccCCCceEEeecccccCCCCCccccccc-cccccccHHHHHHHHhhCCCcCCCCceeeecCccc
Confidence 999999999998642 34679999999999999986432211 11123445678888899999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccc
Q 002092 633 GWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAV 712 (968)
Q Consensus 633 ~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (968)
. |||.|||++||++|++|++++||+||||+++....... ...+.+.+|.... ....
T Consensus 168 ~-lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~~~~~----~~~~~a~gy~~~~-------------------~~~~ 223 (342)
T 4gdn_A 168 D-LLGLIIQNVTKQSYTKYITNSWLKPLHMTHTSFKQTNN----KSKHDAIGYELQG-------------------STPV 223 (342)
T ss_dssp H-HHHHHHHHHHTSCHHHHHHHHTTTTTTCTTCEECCSCC----CCSSBCCCEEEET-------------------TEEE
T ss_pred c-hHHHHHHHHHCcCHHHHHHHHHhcccCCCCcccCCCcc----cccccceeeeecC-------------------Cccc
Confidence 9 99999999999999999999999999999643221111 0011111111000 0011
Q ss_pred cccccccccccCccceecCHHHHHHHHHHHHcCC
Q 002092 713 FNMLNIRRAIIPAANGHCSARALARYYAALADGG 746 (968)
Q Consensus 713 ~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg 746 (968)
...+.+.....|+||++||++||+||++++++++
T Consensus 224 ~~~~~~~~~~~~aggl~st~~Dl~~~~~~~l~~~ 257 (342)
T 4gdn_A 224 VSKPEFNLWDTPSAYMMTSTEDLEHWIKFQLNPP 257 (342)
T ss_dssp ECCCCCCGGGHHHHCEEEEHHHHHHHHHHHHSCC
T ss_pred cccccccccchhccccccCHHHHHHHHHHHcCCC
Confidence 1112222233588999999999999999999875
|
| >3zyt_A Esterase A, ESTA; hydrolase, enzymatic promiscuity, beta-lactamase; 2.45A {Arthrobacter nitroguajacolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=427.21 Aligned_cols=346 Identities=26% Similarity=0.368 Sum_probs=246.0
Q ss_pred HHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCc
Q 002092 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (968)
Q Consensus 480 ~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~p 559 (968)
+.+++.+++.++++.++|++++|+++|+.+.+.+.| .|+++||+|+|+|+||+||++++++|+|+|+|+||+|
T Consensus 11 e~v~~~~~~~~~~~~~~GaavaV~~~G~~v~d~~~g-------~p~~~dt~f~i~S~tK~~ta~~~~~lv~~G~l~ld~~ 83 (372)
T 3zyt_A 11 EPVAELFGVFLEQDPDYSAQVAAYHRGVKVLDLSGG-------PHIRPDSVTGVFSCSKGMAGLVMALLVQDGELDLEAE 83 (372)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEEETTEEEEEEEES-------TTCCTTCBEECTTHHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHcCCCceEEEEEEECCEEEEECCCC-------CCCCCCCEEEeeehHHHHHHHHHHHHHHCCCCCCCCc
Confidence 345666666667788999999999999888766655 7899999999999999999999999999999999999
Q ss_pred hhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHHHHHH
Q 002092 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGI 639 (968)
Q Consensus 560 v~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~i 639 (968)
|++|+|+|+..++++|||||||+||||++++..... .....+.+++++.+...++.++||+.|.|||.+|.+|+|.|
T Consensus 84 v~~~lP~~~~~~~~~iTi~~LL~htsGl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~~l~g~i 160 (372)
T 3zyt_A 84 VVKYWPEFGVEGKSSITVAQLLSHRAGLLGVEGGLT---LHEVNNSELAAAKLAELPPLWKPGTAFGYHALTIGIFMEEL 160 (372)
T ss_dssp GGGTCGGGGTTTTSSCBHHHHTTTCSCCCCCTTCCC---HHHHHTTHHHHHHHHTSCCSSCSSSCBCCCTTHHHHHHHHH
T ss_pred hHHhCcccccCCCCCccHHHHhhcCCCCCCcccccc---ccccCCHHHHHHHHHhCCCcCCCCCceeecCCcHHHHHHHH
Confidence 999999998888889999999999999998654321 12245667889999999999999999999999996356999
Q ss_pred HHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhh----hhccccccccc
Q 002092 640 IERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ----LAAITPAVFNM 715 (968)
Q Consensus 640 iE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 715 (968)
||+++|++|++|++++||+||||++ +++.+..............+...+.......... .........+.
T Consensus 161 ie~~tg~~~~~~~~~~i~~PLgm~~------t~~~p~~~~~r~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (372)
T 3zyt_A 161 CRRITGSTLQEVFEQRIRAVTGANF------YLGLPESEESRFAQFRWAADPSWPWVDPASHFGLAANAAVGDILDLPNI 234 (372)
T ss_dssp HHHHHSSCHHHHHHHHTHHHHTCSE------ESSCCGGGGGGBCCCBCCCCTTCCCCCTTSHHHHHTTTTTCCGGGGGGS
T ss_pred HHHHHCCCHHHHHHHhhhcccCCcc------cccCChhhhhcceeeecccCCCccccccccccccccccccccccccccc
Confidence 9999999999999999999999983 3333333322222111111100111100000000 00011112233
Q ss_pred ccccccccCccceecCHHHHHHHHHHHHcC--CCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhhcC
Q 002092 716 LNIRRAIIPAANGHCSARALARYYAALADG--GVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKT 793 (968)
Q Consensus 716 ~~~~~~~~~agG~~sTa~Dlak~~~~ll~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (968)
..+.....|+||++||++||+||+++++++ |...+.+ + ++++++++|.
T Consensus 235 ~~~~~~~~~aggl~sTa~Dlar~~~~ll~g~~G~~~~~~----------------~-----------l~~~~~~~~~--- 284 (372)
T 3zyt_A 235 REVRAAGLSSAAGVASAEGMARIYAAALTGLEGKSAMPP----------------L-----------LTEETIRTVS--- 284 (372)
T ss_dssp HHHHHHCCTTTCCEECHHHHHHHHHHHHTCBCGGGCBCC----------------S-----------SCHHHHHHHH---
T ss_pred hhhhcccccccccccCHHHHHHHHHHHHhCCCCCcCCcc----------------c-----------CcHHHHHHHh---
Confidence 334445678999999999999999999986 4444431 1 2233444441
Q ss_pred CCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCCCCC
Q 002092 794 NNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLA 873 (968)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (968)
+ ||... .|...
T Consensus 285 ----------------------------~----------------------~~~~~----------~d~~~--------- 295 (372)
T 3zyt_A 285 ----------------------------A----------------------EQVFG----------IDRVF--------- 295 (372)
T ss_dssp ----------------------------S----------------------CCEEE----------EBTTT---------
T ss_pred ----------------------------c----------------------cCCCC----------CCccc---------
Confidence 0 01100 00001
Q ss_pred CCCCccccceeeccC--CCCCcceeccCCccCcceeeeCCCCeEEEEEecccCCCCCh---hHHHHHHHHHh
Q 002092 874 LPNGRFGLGFKRYNT--RDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATT---GRIIHFVCSEL 940 (968)
Q Consensus 874 ~~~~~~glG~~~~~~--~~~~~~~~gh~G~~G~~~~~~p~~~~~vv~l~N~~~~~~~~---~~i~~~~~~~l 940 (968)
..+..||+||++... ..++...|||+|++|+++|+||+++++|++++|+...+... ..+.++|.+.|
T Consensus 296 ~~~~~~GlG~~~~~~~~~~~~~~~~GH~G~~Gt~~~idP~~~l~v~~ltN~~~p~~~~~r~~~L~~av~~~l 367 (372)
T 3zyt_A 296 GETGCFGTVFMKSHTRMPFGSYRAFGHDGASASLGFADPVYELGFGYVPQTAEPGGVGCRNFQLSSAVREVI 367 (372)
T ss_dssp SSEEEESSSSEECBTTBCSSCTTCEEEECTTSCEEEEEGGGTEEEEEEESBCCCCSTTSHHHHHHHHHHHHH
T ss_pred CCCCceeeeeccCCCCCCCCCCCeEEECChhhEEEEEEeCCCEEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Confidence 123589999987653 23456789999999999999999999999999998665543 45566676666
|
| >3rju_A Beta-lactamase/D-alanine carboxypeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE CIT; 1.50A {Yersinia pestis} PDB: 3ozh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-46 Score=420.49 Aligned_cols=243 Identities=19% Similarity=0.284 Sum_probs=198.5
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
..+.+.+++.+++.+++..+||++++|+++|++++ .+||+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 4 ~~~~~~ld~~i~~~~~~~~~~G~~~~v~~~g~~~~-~~~G~~~~~~~~~~~~~t~f~i~S~tK~~ta~~i~~lv~~G~l~ 82 (351)
T 3rju_A 4 LLTSQIVDQYAEHIFYNSGAVGMALVVIDNNQVVN-RSFGETQPGNNIRPRPDSLIRIASITKLMTSEIMVKLADDGIVK 82 (351)
T ss_dssp TTHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEE-EEEECSSTTCCCCCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EEEEeccCCCCCCCCCCCEEEehhhHHHHHHHHHHHHHHcCCCC
Confidence 35678899999999999999999999999999998 78999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccC----CCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCC-CCHHHHHHHHHccCCCCCCCCceeeccC
Q 002092 556 LEENIANIWPEFKSN----GKDLIKVHHVLNHTSGLHNVSVDLSSENPLLI-CDWDECLNRIALSAPETEPGQEQLYHYL 630 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~----~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~PG~~~~YSn~ 630 (968)
||+||.+|+|++... ++++|||||||+|||||+++........+... .+.+++++.+...++.++||+.|.|||.
T Consensus 83 ld~~v~~ylP~~~~~~~~~~~~~iTir~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~ 162 (351)
T 3rju_A 83 LTDPLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPGGPQKRPVFTWPTKDNRWQWLKLAKVTVPPGVKAAYSNL 162 (351)
T ss_dssp TTCBGGGGCCTTCCCCCSSTTCCCBHHHHHHTCSCCCSSCSSCCSSCCTTCSSCHHHHHHHHTTCCCCSCTTSEEECCSH
T ss_pred CCCcHHHhCcccccCCCCCCCCCCcHHHHHhCcCCCCCCCCCccccCcccccCCHHHHHHHHHhCCCCCCCCCceeecHH
Confidence 999999999997532 34789999999999999986543322222222 2788999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccc-cccCCCCCCCCCCCCCCccchhhhhccc
Q 002092 631 SFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNK-VSGINNRPDLRLPSSFQPDKISQLAAIT 709 (968)
Q Consensus 631 ~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (968)
||. |||.|||+++|++|++|++++||+||||+++.... +...... ..++...
T Consensus 163 ~~~-llg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~~-----~~~~~~~~~~g~~~~--------------------- 215 (351)
T 3rju_A 163 AYD-LLADALSRAAGKPYAHLLRDKITAPLGMKNTTLTP-----TAEQCKRLMIGVGSS--------------------- 215 (351)
T ss_dssp HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCTTCBSSC-----CHHHHTTBCCCTTCC---------------------
T ss_pred HHH-HHHHHHHHHHCCCHHHHHHHhcccccCCCCCccCC-----ChhhhhhcccCcCCC---------------------
Confidence 999 99999999999999999999999999999643221 1111111 1111000
Q ss_pred ccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 710 PAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 710 ~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
+ .. ......|+||++||++||+||+++++++|.++++
T Consensus 216 ~--~~---~~~~~~g~ggl~st~~Dl~~~~~~~l~~g~~~~~ 252 (351)
T 3rju_A 216 R--CG---NTVAAAGSGGIYSTPEDMQHWMQQFLASDNSAPK 252 (351)
T ss_dssp C--CC---CCGGGTTTTCCEECHHHHHHHHHTTSCCSSCCCC
T ss_pred C--Cc---cccccCCcceeEECHHHHHHHHHHHhCCCCCcch
Confidence 0 00 0123458899999999999999999999998776
|
| >2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=424.88 Aligned_cols=344 Identities=19% Similarity=0.200 Sum_probs=244.9
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+++.+.+++.+++.+++ .+||++++|+++|+.+++.++|+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 2 ~~l~~~l~~~l~~~~~~-~~pG~~v~V~~~g~~v~~~~~G~ad~~~~~p~~~dt~f~iaS~TK~~Ta~~i~~Lve~G~L~ 80 (363)
T 2drw_A 2 SDLNNAIQGILDDHVAR-GVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVD 80 (363)
T ss_dssp CHHHHHHHHHHHHHHTT-TCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred chHHHHHHHHHHHHHHc-CCCeEEEEEEECCcEEEEEeEEeccccCCCCCCCCCeeechhhhHHHHHHHHHHHHHCCCCC
Confidence 35667888889988887 59999999998999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~l 635 (968)
||+||++|||+| ..+++|||||||+|||||+++.. .....+...++.+++++.+...++.++||+.|.|||.||. |
T Consensus 81 Ldd~v~~ylP~~--~~~~~ITir~LLtHtSGl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~-l 156 (363)
T 2drw_A 81 LDEPITRWFPDL--PKAAQMPVRILLNHRSGLPDFET-SMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYV-L 156 (363)
T ss_dssp TTSBGGGTCTTS--TTGGGCBGGGGTTTCSCCCCCTT-TSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHH-H
T ss_pred CCCcHHHhCcCC--CCCCCCcHHHHhhcccCCCCCcc-ccccccccCCCHHHHHHHHHhCCCCCCCCCceEEchhhHH-H
Confidence 999999999999 34578999999999999998722 1111233457889999999999999999999999999998 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccc--c-c
Q 002092 636 CGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITP--A-V 712 (968)
Q Consensus 636 Lg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~ 712 (968)
||.|||+++|++|++|++++||+||||+++..... .+. +...+|........+. .+..+.......+ . .
T Consensus 157 Lg~iie~vtG~~~~~~~~~~I~~PLGm~~t~~~~~---~~~---~~~~~y~~~~~~~~~~--~~~~~~~~~~g~~~~~~~ 228 (363)
T 2drw_A 157 AGMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTH---ETF---PIEREARGYMHAAADD--ENPQWDVSGAGDPVDGVW 228 (363)
T ss_dssp HHHHHHHHHTSCHHHHHHHHTHHHHTCCSCEETTT---CCC---CGGGBCCCEEECBTTC--CSCSSBCTTCCCCBTTEE
T ss_pred HHHHHHHHHCCCHHHHHHHhhhhhcCCCcccCCcc---cCc---chhccccccccccccc--cccccccCCCCccccccc
Confidence 99999999999999999999999999996432110 000 1111111000000000 0000000000000 0 0
Q ss_pred ccccccc-ccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhh
Q 002092 713 FNMLNIR-RAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKN 791 (968)
Q Consensus 713 ~~~~~~~-~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (968)
.+...+. ....++||++||++||+||++++++|..++. +++++|.+
T Consensus 229 ~~~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~g~lls~---------------------------------~~~~~m~~ 275 (363)
T 2drw_A 229 DSTEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQ---------------------------------KRLWEMKD 275 (363)
T ss_dssp ECTTTSCHHHHGGGTCEEECHHHHHHHHHHHHTTSSSCH---------------------------------HHHHHHHT
T ss_pred ccccccCCCCCCCccceEeCHHHHHHHHHHHhcCCCCCH---------------------------------HHHHHHhC
Confidence 0001111 1235889999999999999999998755433 35555521
Q ss_pred cCCCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCCC
Q 002092 792 KTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGD 871 (968)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (968)
|++.. .+. |
T Consensus 276 -----------------------------------------------------~~~~~------------~~~--g---- 284 (363)
T 2drw_A 276 -----------------------------------------------------NIKPA------------FFP--G---- 284 (363)
T ss_dssp -----------------------------------------------------SCEEC------------CCT--T----
T ss_pred -----------------------------------------------------cCCCc------------CCC--C----
Confidence 00000 000 0
Q ss_pred CCCCCCccccceeeccCCCCCcceeccCC-cc--CcceeeeCCCCeEEEEEecccCCCC------ChhHHHHHHHHHh
Q 002092 872 LALPNGRFGLGFKRYNTRDGSYIGFGHSG-MG--GSTGFCDVNNRFAIAVTLNKMSFGA------TTGRIIHFVCSEL 940 (968)
Q Consensus 872 ~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~--G~~~~~~p~~~~~vv~l~N~~~~~~------~~~~i~~~~~~~l 940 (968)
.....||+||++.....+ ..++|+| .+ ++..+++|+.+++||+++|+..... .+..+.+.+.++|
T Consensus 285 --~~~~~yGlG~~~~~~~~g--~~~~H~G~~~G~~s~~~~~P~~~~~vvvl~N~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (363)
T 2drw_A 285 --SNTVANGHGLLLMRYGSS--ELKGHLGQIPGHTSIMGRDEETGAALMLIQNSGAGDFESFYLKGVNEPVDRVLEAI 358 (363)
T ss_dssp --SCEEEECSSCEEEEETTE--EEEEEEEEETTEEEEEEECTTTCCEEEEEESEECSSTTSHHHHTTHHHHHHHHHHH
T ss_pred --CCcCCceeEEEEEEcCCc--eEEEeCCCCCCceEEEEEeeCCCeEEEEEECCCCCCHHHHHHhhcchHHHHHHHHH
Confidence 011489999998753322 5799999 33 4556999999999999999976655 3555555555554
|
| >1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=416.63 Aligned_cols=323 Identities=21% Similarity=0.274 Sum_probs=235.3
Q ss_pred HHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCc
Q 002092 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (968)
Q Consensus 480 ~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~p 559 (968)
+.+++.+++.++++ +||++++| ++|+.+++.++|+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+||+|
T Consensus 9 ~~l~~~l~~~~~~~-~pG~~v~v-~~g~~v~~~~~G~a~~~~~~p~~~dt~f~iaSvTK~~Ta~~i~~Lve~G~l~ldd~ 86 (349)
T 1yqs_A 9 TGLQAVLHTALSQG-APGAMVRV-DDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDAS 86 (349)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEEE-EETTEEEEEEEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHhCC-CCeEEEEE-EcCCEEEEEeEEEeecccCCCCCCCCeEecccchHHHHHHHHHHHHHCCCCCCCCc
Confidence 45666777777664 99999888 78888999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCC-------CCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcH
Q 002092 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 632 (968)
Q Consensus 560 v~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y 632 (968)
|.+|||+|.. .++|||||||+|||||+++....... .+...++.+++++.+...++.++||+.|.|||.||
T Consensus 87 v~~ylP~~~~--~~~ITir~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y 164 (349)
T 1yqs_A 87 VNTYLPGLLP--DDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNF 164 (349)
T ss_dssp HHHHSTTCSS--CTTCBHHHHHTTCSCCCCTHHHHTSSHHHHHHHHTTCCCCHHHHHHHHHTSCCSSSTTSCCCCCHHHH
T ss_pred HHHhccCcCC--CCCccHHHHhhCcCCCCcccchhhhhccchhhcCccccCCHHHHHHHHhcCCCccCCCCCeEEccHhH
Confidence 9999999976 57899999999999999862111100 12245788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCC-CCCCCCCCCCCCccchhhhhccccc
Q 002092 633 GWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGIN-NRPDLRLPSSFQPDKISQLAAITPA 711 (968)
Q Consensus 633 ~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (968)
. |||.|||+++|++|+++++++||+||||+++....... ........+|. ..+. +.+.
T Consensus 165 ~-lLg~iie~vtG~~~~~~~~~~i~~PLGm~~t~~~~~~~---~~~~~~~~gy~~~~~~-----------------g~~~ 223 (349)
T 1yqs_A 165 V-VAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDT---VIPGTHANGYLTPDEA-----------------GGAL 223 (349)
T ss_dssp H-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBCCTTCC---CCCSSBCCCEECCSST-----------------TCCC
T ss_pred H-HHHHHHHHHhCCCHHHHHHHhcccccCCCCcccCCccc---ccccccccceeccCCC-----------------CCcc
Confidence 8 99999999999999999999999999999643211100 00000111111 0000 0000
Q ss_pred ccccccccc-cccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHh
Q 002092 712 VFNMLNIRR-AIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALK 790 (968)
Q Consensus 712 ~~~~~~~~~-~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (968)
.+...+.. ...++||++||++||+||+++++++..++.+ .+++|.
T Consensus 224 -~~~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~g~lls~~---------------------------------~~~~m~ 269 (349)
T 1yqs_A 224 -VDSTEQTVSWAQSAGAVISSTQDLDTFFSALMSGQLMSAA---------------------------------QLAQMQ 269 (349)
T ss_dssp -EECCCCCCTTTGGGTCCEECHHHHHHHHHHHHTTCSSCHH---------------------------------HHHHHT
T ss_pred -ccccccCcccccCCcCcEeCHHHHHHHHHHHhcCCCCCHH---------------------------------HHHHHh
Confidence 00000111 1247899999999999999999987554332 455441
Q ss_pred hcCCCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCC
Q 002092 791 NKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYG 870 (968)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (968)
+ +++..
T Consensus 270 ~-----------------------------------------------------~~~~~--------------------- 275 (349)
T 1yqs_A 270 Q-----------------------------------------------------WTTVN--------------------- 275 (349)
T ss_dssp C-----------------------------------------------------CEEEE---------------------
T ss_pred h-----------------------------------------------------ccCCC---------------------
Confidence 0 00000
Q ss_pred CCCCCCCccccceeeccCCCCCcceeccCC-cc--CcceeeeCCCCeEEEEEecccCCCCChhHHHHHHHHHh
Q 002092 871 DLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MG--GSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 940 (968)
Q Consensus 871 ~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~--G~~~~~~p~~~~~vv~l~N~~~~~~~~~~i~~~~~~~l 940 (968)
....||+||++..... +...++|+| .. ++..+++|+.+++||+++|..+.......+.+++.+.+
T Consensus 276 ----~~~~yGlG~~~~~~~~-g~~~~~H~G~~~G~~s~~~~~p~~~~~vvvl~N~~~~~~~~~~~~~~~~~~~ 343 (349)
T 1yqs_A 276 ----STQGYGLGLRRRDLSC-GISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESAF 343 (349)
T ss_dssp ----TTEEECSSCEEEECTT-SCEEEEEEEEETTEEEEEEECTTSSEEEEEEESEESCHHHHHHHHHHHHHHH
T ss_pred ----CCCCceeeEEeeccCC-CceEEEECCccCCeeEEEEEecCCCEEEEEEEcCCCCcccchHHHHHHHHHh
Confidence 0137999999865332 345799999 43 45569999999999999999765442234444455554
|
| >2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=418.72 Aligned_cols=238 Identities=19% Similarity=0.283 Sum_probs=191.8
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
.++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 2 ~~~~~~l~~~~~~~~~~~~~pG~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~ta~~i~~Lve~G~l~ 80 (358)
T 2qz6_A 2 TDIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQYF-NYGVANKDSKQPITENTLFEIGSVSKTFTATLAGYALANGKLK 80 (358)
T ss_dssp -CHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred chHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-EEEeeccCCCCCCCCCCEEechhhHHHHHHHHHHHHHHcCCCC
Confidence 356788999999999989999999999999999885 8999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCC-CCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~ 634 (968)
||+||++|+|+|+...++.|||||||+|||| |+.+... ...+.+++++.+...++.++||+.|.|||.||.
T Consensus 81 Lddpv~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 152 (358)
T 2qz6_A 81 LSDPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPE-------ESDNTGKMISYYQHWKPAFAPGTQRLYSNPSIG- 152 (358)
T ss_dssp TTSBGGGGCGGGTTSGGGSSBHHHHHTTCSSCCCSSCC------------CHHHHHHHHHCCCSSCTTTEECCCHHHHH-
T ss_pred CCCcHHHhCccccCCCCCCccHHHHhhCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeeCHHHHH-
Confidence 9999999999998766678999999999999 9875321 234568899999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccc-cccccCCCCCCCCCCCCCCccchhhhhccccccc
Q 002092 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDL-NKVSGINNRPDLRLPSSFQPDKISQLAAITPAVF 713 (968)
Q Consensus 635 lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (968)
|||.|||+++|++|+++++++||+||||+++... .+.... ..+.+|..... +...
T Consensus 153 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-----~~~~~~~~~a~gy~~~~~-------------------~~~~ 208 (358)
T 2qz6_A 153 LFGHLAAQSLGQPFEKLMEQTVLPKLGLKHTFIS-----VPETQMSLYAQGYDKAGK-------------------PVRV 208 (358)
T ss_dssp HHHHHHHHTTTSCHHHHHHHTTTGGGTCSSEESS-----CCGGGGGGBCCCBCTTSC-------------------BCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHhcccccCCcccccC-----CCchhccceeeeeccCCc-------------------eecc
Confidence 9999999999999999999999999999964221 111111 11112211100 0000
Q ss_pred ccccccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002092 714 NMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 749 (968)
Q Consensus 714 ~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~ 749 (968)
+.. ....++||++||++||+||++++++++.++
T Consensus 209 ~~~---~~~~~aggl~sT~~Dl~~~~~~ll~~~~l~ 241 (358)
T 2qz6_A 209 SPG---ALDAEAYGIKTSTSDLIHYVEVNMHPAKLE 241 (358)
T ss_dssp CCC---TTHHHHTCCEECHHHHHHHHHHHHCGGGSC
T ss_pred CCC---cccCCcceEEEcHHHHHHHHHHHhCCCCCC
Confidence 000 011257899999999999999999988654
|
| >1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=417.51 Aligned_cols=236 Identities=20% Similarity=0.226 Sum_probs=194.5
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 7 ~~~~~~l~~~~~~~~~~~~~~G~~v~V~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 85 (359)
T 1zkj_A 7 DPLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYF-NYGVANRESGAGVSEQTLFEIGSVSKTLTATLGAYAVVKGAMQ 85 (359)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCeEEEEEEECCEEEEE-EEEecccccCCCCCCCCeEechhhHHHHHHHHHHHHHHcCCCC
Confidence 467788999999999889999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCC-CCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~ 634 (968)
||+||++|||+|+...+++|||||||+|||| |+.+... ...+.+++++.+...++.++||+.|.|||.||.
T Consensus 86 Ldd~v~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~- 157 (359)
T 1zkj_A 86 LDDKASRHAPWLKGSAFDSITMGELATYSAGGLPLQFPE-------EVDSSEKMRAYYRQWAPVYSPGSHRQYSNPSIG- 157 (359)
T ss_dssp TTSBGGGGCGGGTTSGGGSSBHHHHHTTCSSCCCSSCCT-------TCCSHHHHHHHHHHCCCSSCTTTEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCcCHHHHhcCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766678999999999999 9975321 245788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCccc-ccccccCCCCCCCCCCCCCCccchhhhhccccccc
Q 002092 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDD-LNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVF 713 (968)
Q Consensus 635 lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (968)
|||.|||+++|++|++|++++||+||||+++.... +... ...+.+|..... +...
T Consensus 158 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~~-----~~~~~~~~a~gy~~~~~-------------------~~~~ 213 (359)
T 1zkj_A 158 LFGHLAASSLKQPFAPLMEQTLLPGLGMHHTYVNV-----PKQAMASYAYGYSKEDK-------------------PIRV 213 (359)
T ss_dssp HHHHHHHHHTTSCHHHHHHHTHHHHTTCSSCBSSC-----CGGGGGGBCCEECTTCC-------------------EECC
T ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCcCcccC-----CcccccCeeeeeccCCc-------------------cccc
Confidence 99999999999999999999999999999643221 1111 111112211100 1000
Q ss_pred ccccccccccCccceecCHHHHHHHHHHHHcCCC
Q 002092 714 NMLNIRRAIIPAANGHCSARALARYYAALADGGV 747 (968)
Q Consensus 714 ~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~ 747 (968)
+.. ....++||++||++||+||++++++++.
T Consensus 214 ~~~---~~~~~aggl~sT~~Dl~~~~~~ll~~~~ 244 (359)
T 1zkj_A 214 NPG---MLADEAYGIKTSSADLLRFVKANIGGVD 244 (359)
T ss_dssp CCC---TTHHHHHCCEECHHHHHHHHHHTTTCCS
T ss_pred CCC---ccCCCCCeeEeCHHHHHHHHHHHhcCCC
Confidence 000 0112678999999999999999999876
|
| >1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=421.02 Aligned_cols=188 Identities=28% Similarity=0.464 Sum_probs=166.7
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
..+.+.+++.+++.++++.++|++++|+++|+++++.++|+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~a~~~~~~p~~~dt~f~iaSvtK~~Ta~~i~~Lve~G~l~ 95 (392)
T 1ci9_A 16 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELA 95 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEEECCeEEEEEEEeccccCCCCCCCCCCeEeeeechHHHHHHHHHHHHHcCCCC
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCcc----CCCCCCcHHHHhcCcCCCCCCCCCC----c------CCCCcCCCCHHHHHHHHHccCCCCCC
Q 002092 556 LEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVDL----S------SENPLLICDWDECLNRIALSAPETEP 621 (968)
Q Consensus 556 Ld~pv~~ylP~~~~----~~~~~ITlr~LLsHtSGl~~~~~~~----~------~~~~~~~~~~~~~~~~l~~~~~~~~P 621 (968)
||+||++|||+|.. ..+++|||||||+|||||++..... . ...+...++.+++++.+...++.++|
T Consensus 96 ldd~v~~ylP~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 175 (392)
T 1ci9_A 96 LDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAP 175 (392)
T ss_dssp TTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSCT
T ss_pred CCCcHHHHhhhhccccCCcccCCCcHHHHhhccCCCCCCccccccchhHHHhhhccCCcCCCCHHHHHHHHhcCCcccCC
Confidence 99999999999964 2467899999999999998632100 0 00112345889999999999999999
Q ss_pred CCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCC
Q 002092 622 GQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGV 665 (968)
Q Consensus 622 G~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t 665 (968)
|+.|.||| +|. |||.|||++||++|++|++++||+||||+++
T Consensus 176 G~~~~Ys~-~~~-lLg~iie~vtG~~~~~~~~~~I~~PLgm~~t 217 (392)
T 1ci9_A 176 GSGWQYSL-ALD-VLGAVVERATGQPLAAAVDALVAQPLGMRDC 217 (392)
T ss_dssp TSCCCCCT-HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCCSC
T ss_pred CCCeeCcC-HHH-HHHHHHHHHhCCCHHHHHHHhCCCCCCCCcC
Confidence 99999997 776 9999999999999999999999999999964
|
| >2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} SCOP: e.3.1.1 PDB: 1pi5_A* 1pi4_A* 2hds_A* 1c3b_A* 1fco_A* 1ga9_A* 1iem_A* 1kds_A* 1kdw_A* 1ke0_A* 1ke3_A* 1iel_A 1kvm_A* 1l2s_A* 1ll5_A* 1ll9_A* 1llb_A* 1mxo_A* 1my8_A* 1xgi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=417.09 Aligned_cols=239 Identities=20% Similarity=0.239 Sum_probs=195.9
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~G~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 81 (358)
T 2ffy_A 3 QQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIK 81 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEEECCEEEEE-EEeecccccCCCCCCCCeEEeeeeHHHHHHHHHHHHHHcCCCC
Confidence 456788999999999889999999999999999886 8899999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCC-CCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~ 634 (968)
||+||.+|||+|+...+++|||||||+|||| |+.... ....+.+++++.+...++.++||+.|.|||.||.
T Consensus 82 Ldd~v~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 153 (358)
T 2ffy_A 82 LSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVP-------DEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG- 153 (358)
T ss_dssp TTSBHHHHCTTCCSGGGTTCBHHHHHHTCSSCCCSSCC-------TTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCcCHHHHhhCcCCCCCccCc-------cccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999997655678999999999999 987532 1245788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccc-cccccCCCCCCCCCCCCCCccchhhhhccccccc
Q 002092 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDL-NKVSGINNRPDLRLPSSFQPDKISQLAAITPAVF 713 (968)
Q Consensus 635 lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (968)
|||.|||+++|++|+++++++||+||||+++.... +.... ..+.+|.. . .+...
T Consensus 154 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~~-----~~~~~~~~a~gy~~--~------------------~~~~~ 208 (358)
T 2ffy_A 154 LFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINV-----PPAEEKNYAWGYRE--G------------------KAVHV 208 (358)
T ss_dssp HHHHHHTGGGTSCHHHHHHHHTTTTTTCTTCBSSC-----CGGGGGGBCCEEET--T------------------EEECC
T ss_pred HHHHHHHHHhCCCHHHHHHHhcccccCCCCcccCC-----CcccccCeeeeEec--C------------------Ccccc
Confidence 99999999999999999999999999999643221 11111 11111110 0 00000
Q ss_pred ccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 714 NMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 714 ~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
... ....++||++||++||+||++++++++.++++
T Consensus 209 ~~~---~~~~~aggl~sT~~Dl~~~~~~ll~~~~~~~~ 243 (358)
T 2ffy_A 209 SPG---ALDAEAYGVKSTIEDMARWVQSNLKPLDINEK 243 (358)
T ss_dssp CCC---TTHHHHTCCEECHHHHHHHHHHHHCGGGCSSH
T ss_pred ccc---cccCCCceEEECHHHHHHHHHHHhCCCCCChH
Confidence 000 01136899999999999999999999887654
|
| >2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* 3s1y_A* 3s22_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=416.48 Aligned_cols=239 Identities=22% Similarity=0.289 Sum_probs=194.1
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 6 ~~~~~~l~~~i~~~~~~~~~~G~~v~v~~~g~~~~~-~~G~~~~~~~~p~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 84 (371)
T 2wzx_A 6 DRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYF-SYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGYALTQDKMR 84 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCEEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEEE-EEeeccccCCCCCCCCCEEeehhhHHHHHHHHHHHHHHcCCCC
Confidence 357788999999999889999999999999999885 8999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCC-CCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~ 634 (968)
||+||++|+|+|+...++.|||||||+|||| |+.+.... ...+.+++++.+.+.++.++||+.|.|||.||.
T Consensus 85 Ldd~v~~ylP~~~~~~~~~ITir~LL~HtSG~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 157 (371)
T 2wzx_A 85 LDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDS------VQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIG- 157 (371)
T ss_dssp TTSBGGGGCGGGTTSGGGGCBHHHHHTTCSSCCCSSCCTT------CCSCHHHHHHHHHHCCCSSCTTSEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCccHHHHhcCCCCCCCccCCcc------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766678999999999999 98753211 113788999999999999999999999999998
Q ss_pred HHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccc-cccccCCCCCCCCCCCCCCccchhhhhccccccc
Q 002092 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDL-NKVSGINNRPDLRLPSSFQPDKISQLAAITPAVF 713 (968)
Q Consensus 635 lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (968)
|||.|||+++|++|++|++++||+||||+++.... +.... ..+.+|... ..+...
T Consensus 158 lLg~iie~vtG~~~~~~~~~~i~~PLGm~~t~~~~-----~~~~~~~~a~gy~~~-------------------~~~~~~ 213 (371)
T 2wzx_A 158 LFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDV-----PEAALAQYAQGYGKD-------------------DRPLRV 213 (371)
T ss_dssp HHHHHHHHHHTSCHHHHHHHTHHHHTTCSSEESSC-----CGGGGGGBCCCBCGG-------------------GCBCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHhccccCCCCccccCC-----CccccccccccccCC-------------------CCcccc
Confidence 99999999999999999999999999999642211 11111 111111110 001000
Q ss_pred ccccccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002092 714 NMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 749 (968)
Q Consensus 714 ~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~ 749 (968)
+.. ....++||++||++||+||++++++++.++
T Consensus 214 ~~~---~~~~~aggl~sT~~Dl~~~~~~ll~~~~l~ 246 (371)
T 2wzx_A 214 GPG---PLDAEGYGVKTSAADLLRFVDANLHPERLD 246 (371)
T ss_dssp CCC---TTHHHHHCCEEEHHHHHHHHHHHHCGGGSC
T ss_pred CCc---cccCCcCeEEECHHHHHHHHHHHhCCCCCC
Confidence 000 011257899999999999999999988654
|
| >2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=422.67 Aligned_cols=332 Identities=23% Similarity=0.320 Sum_probs=242.5
Q ss_pred HHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCc
Q 002092 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (968)
Q Consensus 480 ~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~p 559 (968)
+.+++.+++.++++.+||++++|+++|+++++.+||+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+||+|
T Consensus 4 ~~l~~~i~~~~~~~~~pG~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dT~f~iaSvTK~fTa~~i~~Lve~G~l~Lddp 83 (447)
T 2qmi_A 4 GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDP 83 (447)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEEEEEETTTTEECCSSCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEECCEEEEEEeeeccccccCCCCCCCCEEecceehHHHHHHHHHHHHHcCCCCCCCc
Confidence 56788888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcc-cCccCCCCCCcHHHHhcCcCCCCCCCCC------CcCC-CCcCCCCHHHHHHHHHc--cCCCCCCCCceeecc
Q 002092 560 IANIWP-EFKSNGKDLIKVHHVLNHTSGLHNVSVD------LSSE-NPLLICDWDECLNRIAL--SAPETEPGQEQLYHY 629 (968)
Q Consensus 560 v~~ylP-~~~~~~~~~ITlr~LLsHtSGl~~~~~~------~~~~-~~~~~~~~~~~~~~l~~--~~~~~~PG~~~~YSn 629 (968)
|++||| +|+..+ ++|||||||+|||||+++... ...+ ......+.+++++.+.. .++.++||+.|.|||
T Consensus 84 v~~ylP~~~~~~~-~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~PG~~~~Ysn 162 (447)
T 2qmi_A 84 VEKFVNIKLRPFG-EPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLN 162 (447)
T ss_dssp GGGTSSSCCCGGG-CCCBHHHHHTTCSSCCBCSHHHHHHHHHTTCSCCCCCCSHHHHHHHGGGGGGGCCSCTTSCCCCCH
T ss_pred HHHhCChhhcCCC-CCCcHHHHhhccCCCCCCCcchhhhhhhccccccCCCCCHHHHHHHHHhcccccccCCCCceeEch
Confidence 999999 987654 789999999999999986420 0000 11223567889988865 468899999999999
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccc
Q 002092 630 LSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAIT 709 (968)
Q Consensus 630 ~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (968)
.||. |||.|||+++|++|++|++++||+||||+++......... ......+|...++ ....
T Consensus 163 ~gy~-lLg~iiE~vtG~~~~~~~~~~I~~PLGm~~t~~~~~~~~~---~~~~a~~y~~~~~---------------g~~~ 223 (447)
T 2qmi_A 163 TGYV-LLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEK---DKDVAMGYILDKE---------------GRLV 223 (447)
T ss_dssp HHHH-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBSSHHHHTT---CSCBCCEEEECTT---------------SCEE
T ss_pred HHHH-HHHHHHHHHhCCCHHHHHHHHhccccCCCCcccccccccc---cCcccccceeCCC---------------CCCc
Confidence 9999 9999999999999999999999999999965322211100 0011111111000 0000
Q ss_pred ccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHH
Q 002092 710 PAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAAL 789 (968)
Q Consensus 710 ~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (968)
+. .......++||++||++||+||+++++++|. + . ++++.+++|
T Consensus 224 ~~-----~~~~~~~~aggl~sT~~Dla~~~~~ll~~g~---~----------------l------------ls~~~~~~m 267 (447)
T 2qmi_A 224 PQ-----PFPYGITADGGLLSSVLDLAKYLKMYIERDE---S----------------I------------VSKEYIEKM 267 (447)
T ss_dssp EE-----CCCTTCCTTTCCEECHHHHHHHHHHHHTTCC---S----------------S------------SCHHHHHHH
T ss_pred cc-----cCcccccCCCccccCHHHHHHHHHHHHhCCC---c----------------c------------CCHHHHHHH
Confidence 10 0111345899999999999999999999863 1 0 123355555
Q ss_pred hhcCCCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCC
Q 002092 790 KNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDY 869 (968)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (968)
.+ ||...
T Consensus 268 ~~-----------------------------------------------------~~~~~-------------------- 274 (447)
T 2qmi_A 268 ET-----------------------------------------------------SYIKV-------------------- 274 (447)
T ss_dssp TS-----------------------------------------------------CCEEC--------------------
T ss_pred hC-----------------------------------------------------ccccC--------------------
Confidence 10 00000
Q ss_pred CCCCCCCCccccceeeccCCCCCcceeccCC-ccCcce--eeeCCCCeEEEEEecccCCCCChhHHHHHHHHHh-CCC
Q 002092 870 GDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGSTG--FCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL-NLP 943 (968)
Q Consensus 870 ~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~G~~~--~~~p~~~~~vv~l~N~~~~~~~~~~i~~~~~~~l-~~~ 943 (968)
+........||+||++... ..+...++|+| .+|+.+ +++|+.+++||+++|+.+. ....+...+.+.+ +.+
T Consensus 275 ~~~~~~~~~yGlG~~~~~~-~~g~~~~~h~G~~~G~~s~~~~~P~~~~~vvvl~N~~~~--~~~~~~~~~~~~~~~~~ 349 (447)
T 2qmi_A 275 PWEIFGGEGYGYGLIIYPN-FLGEKLVGHSGSVGMYTGYIGYIPEKKIGVAVLENSSGY--PPSYIAMYALALLLGKN 349 (447)
T ss_dssp SCCSSSCCEECSSSEEEEE-ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEESSSSS--CHHHHHHHHHHHHTTCC
T ss_pred CcccCCCCCceEEEEEecC-CCCceEEEecCCCCCceEEEEEEeCCCeEEEEEEcCCCC--CHHHHHHHHHHHHhCCC
Confidence 0000023589999998532 23456799999 666444 7899999999999999653 3556666666665 443
|
| >3o3v_A Beta-lactamase, CLBP protein; alpha/beta, disulfide bridge, hydrolase; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=411.72 Aligned_cols=321 Identities=20% Similarity=0.238 Sum_probs=234.0
Q ss_pred HHHHHHHHhccCCCccceEEEE-EEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCc
Q 002092 481 KLRDFLVELGNDGKILGIQVCA-YKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (968)
Q Consensus 481 ~l~~~l~~~~~~~~~~G~~v~V-~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~p 559 (968)
.+++.+++.++++.+||++++| +++|++++ +||+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+||+|
T Consensus 2 ~l~~~i~~~~~~~~~pG~~v~v~~~~g~~~~--~~G~~~~~~~~~~~~~t~f~i~SitK~~ta~~i~~lve~G~l~ld~~ 79 (335)
T 3o3v_A 2 RLSTLIHQRMQEAKVPALSVSVTIKGVRQRF--VYGVADVASQKANTLDTVYELGSMSKAFTGLVVQILIQEGRLRQGDD 79 (335)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEEEETTEEEEE--EEEEEETTTTEECCTTCBEECGGGGHHHHHHHHHHHHHTTSCCTTSB
T ss_pred hHHHHHHHHHHhcCCCcEEEEEEEeCCEEEE--EEEeccccCCCCCCCCCEeehhhhHHHHHHHHHHHHHHCCCCCCCCc
Confidence 3677778888778999999999 99999998 99999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCccC---CCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHHH
Q 002092 560 IANIWPEFKSN---GKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636 (968)
Q Consensus 560 v~~ylP~~~~~---~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lL 636 (968)
|.+|+|+++.. ..++|||||||+|||||+........ ...+.+.+++.+...++.++||+.|.|||.||. ||
T Consensus 80 v~~ylp~~~~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-lL 154 (335)
T 3o3v_A 80 IITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLE----NPMPGSAVAQQLRNENLLFAPGAKFSYASANYD-VL 154 (335)
T ss_dssp HHHHCTTCCEEETTEECCCBHHHHHTTCSCCCTHHHHHHH----SCCSSCCHHHHSTTEECSSCTTSCCCCCTTHHH-HH
T ss_pred hHHhCcccccccCCCCCCccHHHHhhccCCCCCccccccc----ccCChHHHHHHHhcCCcccCCCCceeEchHHHH-HH
Confidence 99999998632 23689999999999999974321110 011223457788888999999999999999999 99
Q ss_pred HHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccccccc
Q 002092 637 GGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNML 716 (968)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (968)
|.|||+++|++|+++++++||+||||+++...... ........+|..... .+...+.+
T Consensus 155 g~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~~~~----~~~~~~a~gy~~~~~------------------~~~~~~~~ 212 (335)
T 3o3v_A 155 GAVIENVTGKTFTEVIAERLTQPLGMSATVAVKGD----EIIVNKASGYKLGFG------------------KPVLFHAP 212 (335)
T ss_dssp HHHHHHHHSSCHHHHHHHHTHHHHTCSSCEECCSS----CCCTTBCCCBCCSSS------------------CCBCCCSC
T ss_pred HHHHHHHhCCCHHHHHHHHhccccCCCccccCccc----ccccCccccccccCC------------------CceeccCc
Confidence 99999999999999999999999999964322111 111111122211100 01111111
Q ss_pred cccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhhcCCCC
Q 002092 717 NIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNS 796 (968)
Q Consensus 717 ~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (968)
......|+||++||++||+||+++++++|..+ +++++++.++.
T Consensus 213 -~~~~~~~aggl~sT~~Dl~~~~~~ll~~g~~~------------------------------~~~~~~~~~~~------ 255 (335)
T 3o3v_A 213 -LARNHVPAAYIHSTLPDMEIWIDAWLHRKALP------------------------------ATLREAMSNSW------ 255 (335)
T ss_dssp -CCSTTHHHHTEEECHHHHHHHHHHHHTGGGSC------------------------------HHHHHHHHHHT------
T ss_pred -cccCCCCCcccEeCHHHHHHHHHHHcCCCCcc------------------------------ccCHHHHHHHh------
Confidence 11233578999999999999999999876431 12344555430
Q ss_pred CCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCCCCCCCC
Q 002092 797 EHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPN 876 (968)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (968)
.. +... .+...+
T Consensus 256 ------------------------~~-----------------------~~~~---------------------~~~~~~ 267 (335)
T 3o3v_A 256 ------------------------RG-----------------------NSDV---------------------PLAADN 267 (335)
T ss_dssp ------------------------CC-----------------------CCSS---------------------CCCSSC
T ss_pred ------------------------Cc-----------------------Cccc---------------------CCCCCC
Confidence 00 0000 000012
Q ss_pred -CccccceeeccCCCCCcceeccCC-ccC--cceeeeCCCCeEEEEEecccCCCCChhHHHHHHHHHh
Q 002092 877 -GRFGLGFKRYNTRDGSYIGFGHSG-MGG--STGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 940 (968)
Q Consensus 877 -~~~glG~~~~~~~~~~~~~~gh~G-~~G--~~~~~~p~~~~~vv~l~N~~~~~~~~~~i~~~~~~~l 940 (968)
..||+||++... ++. .++|+| .+| +..+++|+.+++||+++|+.+ .....+.+.|.+.|
T Consensus 268 ~~~yG~Gw~~~~~--~~~-~~~h~G~~~G~~s~~~~~P~~~~~vvvl~N~~~--~~~~~l~~~i~~~l 330 (335)
T 3o3v_A 268 RILYASGWFIDQN--QGP-YISHGGQNPNFSSCIALRPDQQIGIVALANMNS--NLILQLCADIDNYL 330 (335)
T ss_dssp CCEECSSCEEECT--TSC-EEEEEEECSSCEEEEEEEGGGTEEEEEEESBCC--HHHHHHHHHHHHHH
T ss_pred cCceeeeEEEEeC--CCe-EEEeCCCCCCeeEEEEEEecCCeEEEEEECCCC--ccHHHHHHHHHHHH
Confidence 589999999763 222 499999 444 455889999999999999954 33567777777666
|
| >3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=415.76 Aligned_cols=240 Identities=20% Similarity=0.230 Sum_probs=184.6
Q ss_pred HHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 482 l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+++.+++.++++.+||+ ++|+++|+++++.+||+++...+.|+++||+|+|||+||+|||+++++|+|+|+|+||+||+
T Consensus 3 ld~~i~~~~~~~~~~G~-v~v~~~g~~v~~~~~G~a~~~~~~p~~~~t~f~iaSitK~~Ta~~i~~Lve~G~l~Ldd~v~ 81 (356)
T 3tg9_A 3 MKNHLHTIMEDWKLSGT-ALMKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFTAIAICQLVEAGKLSFDTPLS 81 (356)
T ss_dssp CCCHHHHHHHHHTCCEE-EEEEETTSCCEEEEESEEETTTTEECCTTCBEECGGGGHHHHHHHHHHHHHHTSCCTTCBGG
T ss_pred HHHHHHHHHHhCCCCeE-EEEEECCeEEEEeeecccccccCCCCCCCCeEEcccchHHHHHHHHHHHHHcCCCCcccCHH
Confidence 34567777777889999 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcc-cCccCCCCCCcHHHHhcCcCCCCCCCCCCcC---------CCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCc
Q 002092 562 NIWP-EFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS---------ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLS 631 (968)
Q Consensus 562 ~ylP-~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~ 631 (968)
+|+| +| ++|||||||+|||||+++...... .......+.+++++.+...++.++||+.|.|||.|
T Consensus 82 ~ylP~~~-----~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~ 156 (356)
T 3tg9_A 82 DWLDAPF-----PNVTIHHLLTHTSGVPDYFDEEITDDFEDLWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHRFHYNNAG 156 (356)
T ss_dssp GTCSSCC-----TTCBHHHHHTTCSCCCCSCCC-------CGGGTSCGGGCCSGGGGGGGTTTSCCCSCTTSCCCCCHHH
T ss_pred HhCCCCc-----CCccHHHHhhCcCCCCCcccchhhhhHHHhhcccccccccCHHHHHHHHhhCCCCCCCCCCceeCcHH
Confidence 9999 77 569999999999999986432210 11112346678888888889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccc
Q 002092 632 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711 (968)
Q Consensus 632 y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (968)
|. |||.|||++||++|+++++++||+||||+++....... .......+|...++ ...
T Consensus 157 ~~-lLg~iie~vtg~~~~~~~~~~I~~PLGm~~t~~~~~~~----~~~~~a~gy~~~~~------------------~~~ 213 (356)
T 3tg9_A 157 FI-LLGLVVESVSGVTFQEYVEANVFQRAGMHESGYFAFDT----LPAKTALGYIDLED------------------GSW 213 (356)
T ss_dssp HH-HHHHHHHHHHSSCHHHHHHHHTHHHHTCTTCBCCBGGG----CCSSBCCCEEECTT------------------SCE
T ss_pred HH-HHHHHHHHHhCCCHHHHHHHHhhcccCCcccccCCccc----cCcccceeeeecCC------------------Cce
Confidence 98 99999999999999999999999999999643211110 00111111211100 000
Q ss_pred ccccccccccccCccceecCHHHHHHHHHHHHcCCCCCC
Q 002092 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750 (968)
Q Consensus 712 ~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~ 750 (968)
..+.........++||++||++||+||+++++++..++.
T Consensus 214 ~~~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~~~lls~ 252 (356)
T 3tg9_A 214 KTNLYSLPVIGGSDGGAYVTAEDMMKLWLALMRHELLNE 252 (356)
T ss_dssp EESTTTSCSBCCSSSCCEECHHHHHHHHHHHHTTSSSCH
T ss_pred eeccccCCccccCCccEEECHHHHHHHHHHHhcCCCCCH
Confidence 001111112234889999999999999999998765543
|
| >3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=417.65 Aligned_cols=358 Identities=16% Similarity=0.142 Sum_probs=241.9
Q ss_pred CCchHHHHHHHHHHHhccCCCccceEEEEE-EcCeEEEEeeeecCCCCCCC-----CCCCCCcceeecchHHHHHHHHHH
Q 002092 474 IHSDVEAKLRDFLVELGNDGKILGIQVCAY-KDGEVIIDTSAGMLGRYDPR-----PVQPDSLFPVFSVTKGITAGMLHW 547 (968)
Q Consensus 474 ~~~~l~~~l~~~l~~~~~~~~~~G~~v~V~-~~g~~v~~~~~G~~~~~~~~-----~~~~dt~f~i~S~SK~~ta~~i~~ 547 (968)
...++.+.+++.+++.++++.+||++++|+ ++|+++++.++|+++.+.+. |+++||+|+|+|+||+|||+++++
T Consensus 28 ~~~~~~~~l~~~l~~~~~~~~~pG~~v~vv~~~G~iv~~~~~G~~~~~~~~~~~~~p~~~dt~f~i~S~TK~~ta~~i~~ 107 (432)
T 3hlc_A 28 AAAGPVVLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPLQVDTPCRLASATKLLTTIMVLQ 107 (432)
T ss_dssp CCCCHHHHHHHHHHHHHHTTSCSEEEEEEEESSSSCEEEEEEEBSCSSCCTTSCCCBCCTTCCEECGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCeEEEEEEecCCeEEEEeeeeeccccccCccCCCCCCCCCEEEchhhHHHHHHHHHHH
Confidence 455788889999999999999999999988 89999999999999998877 999999999999999999999999
Q ss_pred HHHCCCCCccCchhhhcccCccC-----------------CCCCCcHHHHhcCcCCCCCCCCCCc-----CCCCcCCCCH
Q 002092 548 LVDNGKLKLEENIANIWPEFKSN-----------------GKDLIKVHHVLNHTSGLHNVSVDLS-----SENPLLICDW 605 (968)
Q Consensus 548 lve~G~l~Ld~pv~~ylP~~~~~-----------------~~~~ITlr~LLsHtSGl~~~~~~~~-----~~~~~~~~~~ 605 (968)
|+|+|+|+||+||++|||+|+.. .++ |||||||+|||||+....... ..........
T Consensus 108 Lve~G~l~Lddpv~~ylPe~~~~~v~~~~~~~~~~~~~~~~~~-ITir~LLthtSGl~~~~~~~~~~~~~~~~~~~~~~~ 186 (432)
T 3hlc_A 108 CMERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGK-ITLRHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEK 186 (432)
T ss_dssp HHHTTSCCTTSBTTTTCHHHHTCCEEEEECTTCCEEEECCSSC-CBHHHHHTTCSSCCCGGGCHHHHHHHHTTCCCC---
T ss_pred HHHCCCCCCCCcHHHhhhhhcccccccccccccCccccCCCCC-CcHHHHHhCcCCCCCCCCChhHHHHHhcCCCCCCcH
Confidence 99999999999999999998652 234 999999999999997432110 0000001222
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccc-ccccc
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDL-NKVSG 684 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~-~~~~~ 684 (968)
+.+.. ....++.++||+.|.|| .+|. +||.|||++||++|++|++++||+||||+++....... .... ..+..
T Consensus 187 ~~~~~-~~~~pl~~~PG~~~~Ys-~~~~-lLg~iie~vtG~~~~~~~~~~I~~PLGm~~t~f~~~~~---~~~~~~~a~~ 260 (432)
T 3hlc_A 187 FGIQS-RLAPPAVNDPGAEWIYG-TNLD-WAGKLVERATGLDLEQYLQENICAPLGITDMTFKLQQR---PDMLARRADQ 260 (432)
T ss_dssp ------CSCSCBSSCTTSCCCCC-THHH-HHHHHHHHHHSSCHHHHHHHHTHHHHTCCSEESCGGGC---HHHHHHCCCE
T ss_pred HHHHH-HhcCCCccCCCCCeecc-hHHH-HHHHHHHHHHCCCHHHHHHHHHhcccCCccceecCCCC---hHHhcccccc
Confidence 33333 34578899999999999 7998 99999999999999999999999999999643221100 1111 11111
Q ss_pred CCCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCC
Q 002092 685 INNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 764 (968)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~ 764 (968)
+...+++. ....+.............|+||++||++||+||+++++++| ++
T Consensus 261 ~~~~~~g~-------------~~~~~~~~~~~~~~~~~~g~gGl~sTa~Dlarf~~~ll~~g---~~------------- 311 (432)
T 3hlc_A 261 THRNSADG-------------RLRYDDSVYFRADGEECFGGQGVFSSPGSYMKVLHSLLKRD---GL------------- 311 (432)
T ss_dssp EEECTTTC-------------CEEEECCGGGTCCCSSCCTTTCCEECHHHHHHHHHHHHHTC---SS-------------
T ss_pred eeECCCCc-------------eeecCCcccccCCCCCCcCCCcceECHHHHHHHHHHHHhCC---Cc-------------
Confidence 11111100 00000000011111233588999999999999999999975 11
Q ss_pred CCCCCCCcccchhccchhHHHHHHHhhcCCCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCC
Q 002092 765 HIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDE 844 (968)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (968)
+ ++++++++|.+
T Consensus 312 ----l-----------Ls~~~v~~m~~----------------------------------------------------- 323 (432)
T 3hlc_A 312 ----L-----------LQPQTVDLMFQ----------------------------------------------------- 323 (432)
T ss_dssp ----S-----------SCHHHHHHHTS-----------------------------------------------------
T ss_pred ----c-----------CCHHHHHHHhc-----------------------------------------------------
Confidence 1 22345555511
Q ss_pred CCCccc-----cccccCCcccccccCCCCCCCCCCCCCccccceeeccCC-----CCCcceeccCCccCcceeeeCCCCe
Q 002092 845 PQSSNV-----RKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR-----DGSYIGFGHSGMGGSTGFCDVNNRF 914 (968)
Q Consensus 845 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~glG~~~~~~~-----~~~~~~~gh~G~~G~~~~~~p~~~~ 914 (968)
||.... ...+..+...+.+. | .+...+.+||+||++.... ..+...|+|+|++|+++|+||++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~gyGlg~~~~~~~~~~~~~~~~g~~~w~G~~g~~~~vdP~~~l 398 (432)
T 3hlc_A 324 PALEPRLEEQMNQHMDASPHINYGG--P---MPMVLRRSFGLGGIIALEDLDGENWRRKGSLTFGGGPNIVWQIDPKAGL 398 (432)
T ss_dssp CCCCHHHHHHHHHHHHTCTTTCTTT--T---SCSSCCEEECSSSEEESSCSSTTSSCCTTCEEEEETTTEEEEEETTTTE
T ss_pred cCCCchhhhhhhhhccccccccccc--C---CCCCCCCcCccceEEEecCccCCCCCCCceeEeCCcccCeEEEEccCCE
Confidence 000000 00000000000000 0 0112346999999986532 2344679999999999999999999
Q ss_pred EEEEEecccCCCC-----ChhHHHHHHHHHh
Q 002092 915 AIAVTLNKMSFGA-----TTGRIIHFVCSEL 940 (968)
Q Consensus 915 ~vv~l~N~~~~~~-----~~~~i~~~~~~~l 940 (968)
++|+++|..+.++ ....+.++|.++|
T Consensus 399 ~~v~~tn~~p~~~~~~~~~~~~~~~~vy~al 429 (432)
T 3hlc_A 399 CTLAFFQLEPWNDPVCRDLTRTFEHAIYAQY 429 (432)
T ss_dssp EEEEECCEESSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcCcchHHHHHHHHHHHHHHh
Confidence 9999999987664 3456666676666
|
| >1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} SCOP: b.61.3.1 b.61.3.1 e.3.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=415.08 Aligned_cols=237 Identities=21% Similarity=0.258 Sum_probs=183.6
Q ss_pred HHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCc
Q 002092 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (968)
Q Consensus 480 ~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~p 559 (968)
+.+++.+++.+++..+||++++|+++|+++++.++|+++...+.|+++||+|+|||+||+|||+++++|+++| |+||+|
T Consensus 7 ~~l~~~l~~~~~~~~~pG~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dT~f~iaSvTK~fTa~~i~~Lve~G-l~Lddp 85 (520)
T 1ei5_A 7 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEP-ELLDDA 85 (520)
T ss_dssp HHHHHHHHTHHHHSCSSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSG-GGGHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEecccccCCCCCCCCeEechhhHHHHHHHHHHHHHHcC-CCCCCc
Confidence 4677777777777889999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred hhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCC--cCCCCcCCCCHHHHHHHHHcc-CCCCCCCCceeeccCcHHHHH
Q 002092 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDL--SSENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 636 (968)
Q Consensus 560 v~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~PG~~~~YSn~~y~~lL 636 (968)
|++|||+|+. +.|||||||+|||||+++.... ....+...++.+++.+.+... ++.++||+.|.|||.||. ||
T Consensus 86 v~~ylP~~~~---~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PG~~~~Ysn~gy~-lL 161 (520)
T 1ei5_A 86 LEAYLDKFED---ERPAVRDLCNNQSGLRDYWALSVLCGADPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFR-IL 161 (520)
T ss_dssp HHHHTTTCCS---CCCCHHHHHTTCSCCCCHHHHHHHTTCCTTCCBCHHHHHHHHHTCCCCSSCTTSSCCCCHHHHH-HH
T ss_pred HHHhcCcCCC---CCCCHHHHHhCcCCCCCcccchhhccCCcccCCCHHHHHHHHHhcCcccCCCCCceEECcHHHH-HH
Confidence 9999999974 4699999999999999753210 111223345677888877764 568999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccccccc
Q 002092 637 GGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNML 716 (968)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (968)
|.|||+++|++|++|++++||+||||+++... .+....+.+.+|..... ....+. .+.
T Consensus 162 g~iiE~vtG~~~~~~l~~~I~~PLGm~~t~~~-----~~~~~~~~a~gy~~~~~---------------~~~~~~-~~~- 219 (520)
T 1ei5_A 162 ADLIEAHTGRTLVDILSERIFAPAGMKRAELI-----SDTALFDECTGYEGDTV---------------RGFLPA-TNR- 219 (520)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCTTCEEC-----CBGGGCCSSCCEEEETT---------------TEEEEC-CCC-
T ss_pred HHHHHHHHCCCHHHHHHHhhhcccCCCccCcC-----CcccccccccccccCcc---------------cccccc-ccc-
Confidence 99999999999999999999999999954211 11100011111110000 000000 000
Q ss_pred cccccccCccceecCHHHHHHHHHHHHcCC
Q 002092 717 NIRRAIIPAANGHCSARALARYYAALADGG 746 (968)
Q Consensus 717 ~~~~~~~~agG~~sTa~Dlak~~~~ll~gg 746 (968)
....++||++||++||+||+++++++.
T Consensus 220 ---~~~~g~gGl~sT~~Dl~r~~~~l~~~~ 246 (520)
T 1ei5_A 220 ---IQWMGDAGICASLNDMIAWEQFIDATR 246 (520)
T ss_dssp ---BBCCSSSCEEECHHHHHHHHHHHHHTT
T ss_pred ---ccccCCcccccCHHHHHHHHHHHhhCC
Confidence 123578999999999999999988653
|
| >2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=392.97 Aligned_cols=299 Identities=16% Similarity=0.156 Sum_probs=222.3
Q ss_pred HHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhc
Q 002092 485 FLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIW 564 (968)
Q Consensus 485 ~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~yl 564 (968)
.+++.+++..++| ++|+++|+++++.++|. +++||+|.|+|+||+|||+++++|+|+|+|+||+||++|+
T Consensus 72 ~l~~~l~~~~~~g--v~V~~~G~iv~~~~~G~--------~~~~t~f~i~SvTK~~Ta~~i~~Lve~G~l~lddpv~~yl 141 (392)
T 2dcf_A 72 DLEQRLEQTYTDA--FLVLRGTEVVAEYYRAG--------FAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYV 141 (392)
T ss_dssp THHHHHHHTTEEE--EEEEETTEEEEEEECTT--------CCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTC
T ss_pred hHHHHHHhcCCCE--EEEEECCEEEEEeccCC--------CCCCCeeeeeeeHHHHHHHHHHHHHHCCCCCCcCcHHHhh
Confidence 3444455566787 57789999999999984 6899999999999999999999999999999999999999
Q ss_pred ccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCC------------CCc-CCCCHHHHHHHHHccCCCCCCCCceeeccCc
Q 002092 565 PEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE------------NPL-LICDWDECLNRIALSAPETEPGQEQLYHYLS 631 (968)
Q Consensus 565 P~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~------------~~~-~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~ 631 (968)
|+++...++.|||||||+|||||+......... .+. ..+ .+++.+.+...++.+ ||+.|.|||.|
T Consensus 142 Pe~~~~~~~~iTir~LL~htSGl~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~-PG~~~~Ysn~~ 219 (392)
T 2dcf_A 142 PELAGSVYDGPSVLQVLDMQISIDYNEDYVDPASEVQTHDRSAGWRTRRHGD-PADTYEFLTTLRGDG-STGEFQYCSAN 219 (392)
T ss_dssp GGGTTSTTSSCBHHHHHTTCBCCSCCCCSSCTTSHHHHHHHHHTSSCCCTTC-CSSHHHHHHTCCCCS-CBSSCCCCHHH
T ss_pred hhccCCCCCCCcHHHHHhcccCCCCccccCCcchHHHHHHhhcccccccccC-hHHHHHHHHhCcccC-CCceeEECChh
Confidence 999877678999999999999999642111000 000 000 456788888888888 99999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccc
Q 002092 632 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711 (968)
Q Consensus 632 y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (968)
|. |||.|||++||++|++|++++||+||||+++.. ... ++.
T Consensus 220 ~~-lLg~iie~vtG~~~~~~l~~~I~~PLGm~~t~~------~~~-----------d~~--------------------- 260 (392)
T 2dcf_A 220 TD-VLAWIVERVTGLRYVEALSTYLWAKLDADRDAT------ITV-----------DTT--------------------- 260 (392)
T ss_dssp HH-HHHHHHHHHHCSCHHHHHHHHTGGGTTCSSCCE------ECB-----------CTT---------------------
T ss_pred HH-HHHHHHHHHhCCCHHHHHHHHhhhhcCCCCcce------eee-----------CCC---------------------
Confidence 98 999999999999999999999999999995311 100 000
Q ss_pred ccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhh
Q 002092 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKN 791 (968)
Q Consensus 712 ~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (968)
+...++||++||++||+||+++++++|.+++++. ++++.+++|.+
T Consensus 261 --------g~~~~~ggl~sT~~Dlar~~~~ll~~G~~~g~~l---------------------------l~~~~~~~~~~ 305 (392)
T 2dcf_A 261 --------GFGFANGGVSCTARDLARVGRMMLDGGVAPGGRV---------------------------VSEDWVRRVLA 305 (392)
T ss_dssp --------CCBCTTTCEEECHHHHHHHHHHHHTTTEETTEEC---------------------------SCHHHHHHHHH
T ss_pred --------CCcccCceeecCHHHHHHHHHHHHcCCccCCEEe---------------------------CCHHHHHHHhc
Confidence 1235889999999999999999999998877621 23345555521
Q ss_pred cCCCCCCCcccccccCCCCccccccc-chhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCC
Q 002092 792 KTNNSEHGHKYTKDLEGGSHIRTASG-DTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYG 870 (968)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (968)
... ..... ..|..
T Consensus 306 ~~~------------------~~~~~~~~~~~------------------------------------------------ 319 (392)
T 2dcf_A 306 GGS------------------HEAMTDKGFTN------------------------------------------------ 319 (392)
T ss_dssp CCC------------------TTTCCCHHHHH------------------------------------------------
T ss_pred cCC------------------chhcccccccC------------------------------------------------
Confidence 000 00000 00000
Q ss_pred CCCCCCCccccceeeccCCCCCcceeccCCccCcceeeeCCCCeEEEEEecccCCCCC-----hhHHHHHHHHHh
Q 002092 871 DLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGAT-----TGRIIHFVCSEL 940 (968)
Q Consensus 871 ~~~~~~~~~glG~~~~~~~~~~~~~~gh~G~~G~~~~~~p~~~~~vv~l~N~~~~~~~-----~~~i~~~~~~~l 940 (968)
..++.+||+||++.. .+...|+|+|.+|+.+|++|+.+++||+++|....... ...+.+.|.+.|
T Consensus 320 --~~~~~~YG~gw~~~~---~~~~~~~h~G~~G~~~~i~P~~~~~iv~lsn~~~~~~~~~~~~~~~~~~ai~~~l 389 (392)
T 2dcf_A 320 --TFPDGSYTRQWWCTG---NERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRAL 389 (392)
T ss_dssp --HCTTCEEETTEEECC---CTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred --CCCCCCcCcceEecC---CCCCeEEEEccCCeEEEEECCCCEEEEEeCCCCCCCCccccHHHHHHHHHHHHHH
Confidence 012358999999864 23456999999999999999999999999999766542 234555555555
|
| >4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=385.64 Aligned_cols=285 Identities=14% Similarity=0.159 Sum_probs=214.2
Q ss_pred HHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 482 l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+++.+++ .... ++.|+++|+++++.|++ +.++||+|.++|+||+|||+++++|+|+|+|+||+||+
T Consensus 101 l~~~l~~----~~t~--a~lV~k~GkIv~E~Y~~--------~~~~dt~~~i~SvtKs~ta~~i~~lve~G~l~ldd~v~ 166 (422)
T 4gb7_A 101 LKELLDD----NKTD--AFVVVHNGQLVYERYFN--------GYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTAD 166 (422)
T ss_dssp HHHHHHH----TTEE--EEEEEETTEEEEEEECT--------TCCTTSCEECGGGGHHHHHHHHHHHHHTTSSCTTSBHH
T ss_pred HHHHHHh----cCCC--EEEEEECCEEEEEeCCC--------CCCCCCeeeeeeccHHHHHHHHHHHHHcCCcccCcchh
Confidence 4555544 3334 47888999999999886 57899999999999999999999999999999999999
Q ss_pred hhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcC-----------------CCCcCCCCHHHHHHHHHccCCCCCCCCc
Q 002092 562 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS-----------------ENPLLICDWDECLNRIALSAPETEPGQE 624 (968)
Q Consensus 562 ~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~PG~~ 624 (968)
+|+|+++...+++|||||||+||||++........ ..........++...+...++.++||+.
T Consensus 167 ~ylPe~~~~~~~~iTir~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~ 246 (422)
T 4gb7_A 167 TYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPPGSV 246 (422)
T ss_dssp HHCGGGTTSHHHHSBHHHHHTTCCEEECCCTTCCBTTBCHHHHHHHHHTTCSCCCTTCCSCSSHHHHHHTCEEEECTTSS
T ss_pred ccCccccccccccchHhhhhhcccccccccccccCccccchhhhhhhhcccccccccccchHHHHHHHhhcccccCCCce
Confidence 99999987767789999999999999643221100 0011112234567777888888999999
Q ss_pred eeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhh
Q 002092 625 QLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 704 (968)
Q Consensus 625 ~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (968)
|.|||.+|. +||.|||++||++|.+|++++||+||||+++.. ..
T Consensus 247 ~~Ys~~~~~-lLg~iie~vtG~~~~~~l~e~i~~PLgm~~~~~-----~~------------------------------ 290 (422)
T 4gb7_A 247 FSYNNGSTE-TLAWIIRTITGKSLAENVSERIWSQIGMEENAY-----YV------------------------------ 290 (422)
T ss_dssp CCCCHHHHH-HHHHHHHHHHSSCHHHHHHHHTTTTSCCSSCEE-----EE------------------------------
T ss_pred eecccccHH-HHHHHHHHHHCCCHHHHhHHHHhcccCCccccc-----cc------------------------------
Confidence 999999998 999999999999999999999999999994211 00
Q ss_pred hhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHH
Q 002092 705 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKE 784 (968)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (968)
....+...++||+++|++||+||+++++++|.+++++. .+. +
T Consensus 291 -----------~~~~g~~~~~ggl~sta~D~arfg~l~l~~G~~~g~qi----------------l~~-----------~ 332 (422)
T 4gb7_A 291 -----------TDETKIEQASAGLNATARDMARFGQLLLNNGEYNGKQI----------------LPS-----------S 332 (422)
T ss_dssp -----------BCTTSCBCTTTCEEECHHHHHHHHHHHHTTTEETTEES----------------SCT-----------H
T ss_pred -----------cCCCCCcccccceecCHHHHHHHHHHHHcCCccCCeEe----------------cCH-----------H
Confidence 00012234789999999999999999999999988731 111 2
Q ss_pred HHHHHhhcCCCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCccccccc
Q 002092 785 LLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFL 864 (968)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (968)
.+++|.+ . |.. +...
T Consensus 333 ~v~~~~~----------------------------------~-------------------~~~------------~~~~ 347 (422)
T 4gb7_A 333 ITEDIKN----------------------------------V-------------------QEG------------ELAI 347 (422)
T ss_dssp HHHHHHT----------------------------------C-------------------CTT------------SSBS
T ss_pred HHHHHhc----------------------------------c-------------------CCC------------Cccc
Confidence 2332210 0 000 0000
Q ss_pred CCCCCCCCCCCCCccccceeeccCCCCCcceeccCCccCcceeeeCCCCeEEEEEecccCCCCCh
Q 002092 865 GVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATT 929 (968)
Q Consensus 865 ~~~~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G~~G~~~~~~p~~~~~vv~l~N~~~~~~~~ 929 (968)
+.| .+.+||+|||+... +...|+|.|.+|+++|++|+.+++||+++|+.......
T Consensus 348 ~~~-------~~~~YG~~ww~~~~---~~~~~~~~G~~Gq~i~vdP~~~lviV~lsn~~~~~~~~ 402 (422)
T 4gb7_A 348 GPG-------ASISYHNQWWIPHN---EQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEI 402 (422)
T ss_dssp STT-------CSCEEETTEEECCC---TTCCEEEEETTTEEEEEETTTTEEEEEEECCSSCCTTH
T ss_pred CCC-------CCCCCCcceeecCC---CCCeEEEEccCCeEEEEEecCCEEEEEeCCCCCCCchh
Confidence 001 23589999998552 34469999999999999999999999999987665544
|
| >3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-39 Score=349.29 Aligned_cols=256 Identities=21% Similarity=0.284 Sum_probs=197.5
Q ss_pred HhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccC
Q 002092 488 ELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEF 567 (968)
Q Consensus 488 ~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~ 567 (968)
+.+++..+||++++|+++|+++++ +| ++||+|++||+||+|||+++++|+++|+|+||+||.+
T Consensus 5 ~~~~~~~vpg~s~~vv~~~~~v~~--~g----------~~~t~~~i~S~tK~~ta~~i~~lv~~G~l~ld~~v~~----- 67 (280)
T 3i7j_A 5 EVLGGWPVPAAAAAVIGPAGVLAT--HG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAGP----- 67 (280)
T ss_dssp GGGGGSSSSCEEEEEEETTEEEEE--ES----------CTTSCEECGGGHHHHHHHHHHHHHHHTSSCTTSBCSS-----
T ss_pred HHHHhCCCCcEEEEEEECCEEEEe--ec----------CCCCeEechhhHHHHHHHHHHHHHHcCCCCCCCcCCC-----
Confidence 456778999999999999997753 55 8899999999999999999999999999999999985
Q ss_pred ccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCCC
Q 002092 568 KSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKK 647 (968)
Q Consensus 568 ~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~ 647 (968)
++|||||||+||||++... .++.++||+.|.|||.+|. +||.|||+++|++
T Consensus 68 -----~~iTi~~LL~htsGl~~~~-----------------------~~~~~~pG~~~~Ysn~~~~-llg~iie~~tg~~ 118 (280)
T 3i7j_A 68 -----PGSTVRHLLAHTSGLAMHS-----------------------DQALARPGTRRMYSNYGFT-VLAESVQRESGIE 118 (280)
T ss_dssp -----TTCBHHHHHTTCSCBCSSS-----------------------SCBCSCTTTCCCCCHHHHH-HHHHHHHHHHTSC
T ss_pred -----CCCcHHHHHhCCCCCCCCC-----------------------CCccCCCCCceeECcHHHH-HHHHHHHHHhCCC
Confidence 5699999999999999631 2578999999999999998 9999999999999
Q ss_pred HHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccccccccccccccCccc
Q 002092 648 FQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAAN 727 (968)
Q Consensus 648 ~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG 727 (968)
|+++++++||+||||+++.. .. ....+++|
T Consensus 119 ~~~~~~~~i~~PLgm~~t~~------~~--------------------------------------------~~~~~~~g 148 (280)
T 3i7j_A 119 FGRYLTEAVCEPLGMVTTRL------DG--------------------------------------------GPAAAGFG 148 (280)
T ss_dssp HHHHHHHHTHHHHTCTTCEE------CS--------------------------------------------GGGGTTTC
T ss_pred HHHHHHHHhhcccCCCCccc------CC--------------------------------------------CCCCCCce
Confidence 99999999999999995311 00 01236789
Q ss_pred eecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhhcCCCCCCCcccccccC
Q 002092 728 GHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLE 807 (968)
Q Consensus 728 ~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (968)
++||++||+||+++++++..++.+ .+++|.+
T Consensus 149 l~sta~Dla~~~~~ll~~~ll~~~---------------------------------~~~~~~~---------------- 179 (280)
T 3i7j_A 149 ATSTVADLAVFAGDLLRPSTVSAQ---------------------------------MHADATT---------------- 179 (280)
T ss_dssp EEECHHHHHHHHHHHHSCCSSCHH---------------------------------HHHHHTS----------------
T ss_pred eeECHHHHHHHHHHHhcCCCCCHH---------------------------------HHHHHhc----------------
Confidence 999999999999999986554433 4454410
Q ss_pred CCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCCCCCCCCCccccceeecc
Q 002092 808 GGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYN 887 (968)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~glG~~~~~ 887 (968)
||..... ....+.+ ...+.+||+||++..
T Consensus 180 -------------------------------------~~~~~~~---------~~~~~~~-----~~~~~~yGlGw~~~~ 208 (280)
T 3i7j_A 180 -------------------------------------VQFPGLD---------GVLPGYG-----VQRPNDWGLGFEIRN 208 (280)
T ss_dssp -------------------------------------CSSTTCC---------EEETTTE-----EESSCCBCSSSEECT
T ss_pred -------------------------------------cccCCcc---------ccccccc-----cCCCCceeeeEEecc
Confidence 0000000 0000000 012358999999876
Q ss_pred CCC-------CCcceeccCCccCcceeeeCCCCeEEEEEecccCCCCChhHHHHHHHHHh
Q 002092 888 TRD-------GSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 940 (968)
Q Consensus 888 ~~~-------~~~~~~gh~G~~G~~~~~~p~~~~~vv~l~N~~~~~~~~~~i~~~~~~~l 940 (968)
... .+...++|+|.+|++.|++|+.+++||+++|+.... ....++..+.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~gh~G~~g~~~~~~P~~~~~vv~ltN~~~~~-~~~~~~~~l~~~v 267 (280)
T 3i7j_A 209 SKSPHWTGECNSTRTFGHFGQSGGFIWVDPKADLALVVLTARDFGD-WALDLWPAISDAV 267 (280)
T ss_dssp TCSSCSSCTTSCTTCEEEEETTTEEEEEETTTTEEEEEEESSCSST-THHHHHHHHHHHH
T ss_pred CCCCcccccCCCCCEEEecCcCCeEEEEEeCCCEEEEEEECCCCCc-hhHHHHHHHHHHH
Confidence 431 245679999999999999999999999999996443 3555555555555
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-23 Score=233.63 Aligned_cols=226 Identities=17% Similarity=0.181 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHhcChHHH-HHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCcccccccccc
Q 002092 45 RAHERNAKRVLNLIIKLEGLWV-KLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123 (968)
Q Consensus 45 ~~~~~~a~~l~~~l~~lgg~~i-K~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~ 123 (968)
+.+++.|+++.+.+.++++..+ ++.|.+...++.. ++++.++++|||.+|+.+.+.+.+.++.+++.+..+.|..|..
T Consensus 16 ~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (365)
T 2y7j_A 16 NKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQS-ANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQ 94 (365)
T ss_dssp -------------------------------------------------------------------CBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCccchhcccccccccccCCCchh-HHHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhhh
Confidence 4577889999999999999998 8899988877755 4566789999999999999999999999999888888877776
Q ss_pred -----ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 -----TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 -----~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
++||+|++|+||+|+++ +|+.||||+++++.......++. ++.+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~-----------------------~~~~~------ 145 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE-----------------------EVREA------ 145 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHH-----------------------HHHHH------
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHH-----------------------HHHHH------
Confidence 89999999999999985 89999999999876543333322 12222
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee-e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
+.+|...+.++.+ ++.+..+..+ . ++..+|||||++|.+|.++.. ....++...+...+.
T Consensus 146 ~~~E~~~l~~l~~-----------------hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~ 207 (365)
T 2y7j_A 146 TRRETHILRQVAG-----------------HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT-EKVALSEKETRSIMR 207 (365)
T ss_dssp HHHHHHHHHHHTT-----------------CTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-----------------CCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHH
Confidence 2344455544421 1223322222 2 567799999999999987754 233456555555444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|+||||+||+++.+ |+++|+|||+++.++.
T Consensus 208 qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~--~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 208 SLLEAVSFLHANNIVHRDLKPENILLDDN--MQIRLSDFGFSCHLEP 252 (365)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEecCcccccCC
Confidence 444 778999999999999999999865 8999999999988764
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-18 Score=207.79 Aligned_cols=200 Identities=15% Similarity=0.132 Sum_probs=136.4
Q ss_pred HHHHHhcCCCCCCH----HHHHHHH---------------------HHhhcCCCCCHHHHHHH----HHhhhCCCccccc
Q 002092 68 LGQYLSTRADVLPE----PYISLLK---------------------QLQDSLPPRPVQEVSQT----IEREFGESMGGMF 118 (968)
Q Consensus 68 ~GQ~ls~r~dllp~----~~~~~L~---------------------~Lqd~~p~~~~~~v~~~----l~~elg~~~~~~f 118 (968)
+||+++|++|++|+ +.+++++ ++||++++++.+.+.++ .+..++..+.+++
T Consensus 72 ~~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~ 151 (543)
T 3c4z_A 72 FQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVL 151 (543)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHH
T ss_pred HHHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHH
Confidence 38899999999999 8888888 78999999999888777 4444433344444
Q ss_pred cccccc----------------------------------cccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHH
Q 002092 119 MDFVET----------------------------------PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLK 163 (968)
Q Consensus 119 ~~~d~~----------------------------------plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~ 163 (968)
..++.. .||+|++|+||+|+.+ +|+.||||+.+......
T Consensus 152 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~------ 225 (543)
T 3c4z_A 152 AHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK------ 225 (543)
T ss_dssp HHHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH------
T ss_pred HhhhcCchHhhhhhhhhhhhhhhhhhhcccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh------
Confidence 444443 4999999999999985 79999999875321100
Q ss_pred HHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCC
Q 002092 164 NAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSET 242 (968)
Q Consensus 164 ~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~ 242 (968)
....-.+.+|.+.+.++.+. .-+.+-..+. .+..
T Consensus 226 ----------------------------~~~~~~~~~E~~iL~~l~hp-----------------~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 226 ----------------------------RKGYQGAMVEKKILAKVHSR-----------------FIVSLAYAFETKTDL 260 (543)
T ss_dssp ----------------------------TTCHHHHHHHHHHHHHCCCT-----------------TBCCEEEEEECSSEE
T ss_pred ----------------------------hHHHHHHHHHHHHHHhcCCC-----------------CEeeEEEEEeeCCEE
Confidence 00011234565555554221 0111212222 4556
Q ss_pred eEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 243 VLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+|||||++|++|.+..... ...++...+...+.+++ +..+|..|++|||+||+|||++.+ |.++|+|||+++.
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~--g~vkL~DFGla~~ 338 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD--GNVRISDLGLAVE 338 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEE
T ss_pred EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC--CCEEEeecceeee
Confidence 8999999999987653211 12355555554444444 788999999999999999999865 8999999999987
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
+..
T Consensus 339 ~~~ 341 (543)
T 3c4z_A 339 LKA 341 (543)
T ss_dssp CCT
T ss_pred ccC
Confidence 653
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-18 Score=190.36 Aligned_cols=145 Identities=15% Similarity=0.192 Sum_probs=97.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+...... .+ .+ .+.+|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~---------------------------~~------~~~~E~ 74 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KE---------------------------RE------ESRREV 74 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH--HH---------------------------HH------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HH---------------------------HH------HHHHHH
Confidence 6799999999999997 489999999986432110 00 00 245677
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+ ..-|.+-.++. ....+||||||+|++|.+....... .++...+...+.+++
T Consensus 75 ~il~~l~H-----------------pnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~a 137 (350)
T 4b9d_A 75 AVLANMKH-----------------PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137 (350)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 77766532 11233334443 4566899999999999887543222 235555555454544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
+..+|..||+||||||+|||++.+ |.++|+|||+++.+....
T Consensus 138 L~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 138 LKHVHDRKILHRDIKSQNIFLTKD--GTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp HHHHHHTTCEETTCCGGGEEECTT--CCEEECSTTEESCCCHHH
T ss_pred HHHHHHCCeeeccCCHHHEEECCC--CCEEEcccccceeecCCc
Confidence 888999999999999999999865 899999999999987643
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-18 Score=191.66 Aligned_cols=147 Identities=20% Similarity=0.240 Sum_probs=106.6
Q ss_pred ccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
+.+.|+.++ .||+|+||.||+|+.+ +|+.||||+.+..-..
T Consensus 72 p~~~y~~~~--~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~------------------------------------ 113 (346)
T 4fih_A 72 PRSYLDNFI--KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ------------------------------------ 113 (346)
T ss_dssp GGGTEEEEE--EEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS------------------------------------
T ss_pred hhHhcEEeE--EeecCcCeEEEEEEECCCCCEEEEEEEecCchh------------------------------------
Confidence 345555554 5999999999999974 8999999987521100
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
..-.+.+|++.+.++.+ ..-|.+-.++. ....+||||||+|++|.++. ....++...+.
T Consensus 114 -~~~~~~~Ei~il~~l~H-----------------pnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l--~~~~l~e~~~~ 173 (346)
T 4fih_A 114 -RRELLFNEVVIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIA 173 (346)
T ss_dssp -SGGGGHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEECCCTTEEHHHHH--HHSCCCHHHHH
T ss_pred -HHHHHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHH--HcCCCCHHHHH
Confidence 01124567777666532 11233334443 45678999999999998764 44567777766
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 174 ~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 174 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 222 (346)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHHHHCCcccccCCHHHEEECCC--CCEEEecCcCceecCC
Confidence 6666655 888999999999999999999866 8999999999988754
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.6e-18 Score=193.03 Aligned_cols=147 Identities=20% Similarity=0.229 Sum_probs=106.3
Q ss_pred ccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
+.+.|+.+. .||.|+||.||+|+.+ +|+.||||+.+..-...
T Consensus 149 p~~~y~~~~--~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~----------------------------------- 191 (423)
T 4fie_A 149 PRSYLDNFI--KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR----------------------------------- 191 (423)
T ss_dssp GGGTEEEEE--EEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----------------------------------
T ss_pred hhHhcEeee--EeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-----------------------------------
Confidence 344455444 6999999999999974 79999999875321100
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
.-.+.+|++.+.++.+ ..-|.+-.++. ....+||||||+|++|.++. ....++...+.
T Consensus 192 --~~~~~~Ei~il~~l~H-----------------pnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i--~~~~l~e~~~~ 250 (423)
T 4fie_A 192 --RELLFNEVVIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIA 250 (423)
T ss_dssp --GGGHHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTEEHHHHH--HHSCCCHHHHH
T ss_pred --HHHHHHHHHHHHhCCC-----------------CCCCceEEEEEECCEEEEEEeCCCCCcHHHHH--hccCCCHHHHH
Confidence 0124456666665532 11233334443 45678999999999998874 45567777776
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 251 ~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~--g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 251 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 299 (423)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSTTTEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC--CCEEEecCccceECCC
Confidence 6666655 889999999999999999999866 8999999999988754
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-17 Score=183.50 Aligned_cols=144 Identities=17% Similarity=0.131 Sum_probs=100.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+...... ..+ . ..-.+.+|.
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~---~~~---------------------~----------~~~~~~~E~ 83 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI---IKE---------------------N----------KVPYVTRER 83 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH---HHT---------------------T----------CHHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHC---CCH---------------------H----------HHHHHHHHH
Confidence 5799999999999997 5899999999763210 000 0 000134565
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-|.+-.++. ....+||||||+|++|.+... ....++...+...+.+++ +
T Consensus 84 ~il~~l~H-----------------pnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~-~~~~l~e~~~~~~~~qi~~al 145 (311)
T 4aw0_A 84 DVMSRLDH-----------------PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSAL 145 (311)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55544321 11233333443 455689999999999988753 233566666555555554 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..||+|||+||+|||++.+ |.++|+|||+++.++.+
T Consensus 146 ~ylH~~~IiHRDlKPeNILl~~~--g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 146 EYLHGKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPE 185 (311)
T ss_dssp HHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECCTT
T ss_pred HHHHHCCCccCCCCHHHeEEcCC--CCEEEEEcCCceecCCC
Confidence 88999999999999999999865 89999999999987643
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-17 Score=185.99 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=96.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+.... ..+|+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------------------------------------------~~~E~ 101 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------------------------------------------RVEEL 101 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------------------------------------CTHHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------------------------------------------HHHHH
Confidence 4699999999999997 4799999998763210 12344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-|.+-.++. ....+||||||+|++|.++.. ....++...+...+.+++ +
T Consensus 102 ~il~~l~H-----------------pnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL 163 (336)
T 4g3f_A 102 VACAGLSS-----------------PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGL 163 (336)
T ss_dssp HTTTTCCC-----------------TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 43333211 11122333333 455689999999999988754 233466666666666655 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCC-ceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~~ 321 (968)
..+|.+||+||||||+|||++.+ | +++|+|||+++.+...
T Consensus 164 ~ylH~~~IiHRDlKp~NILl~~~--g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 164 EYLHTRRILHGDVKADNVLLSSD--GSRAALCDFGHALCLQPD 204 (336)
T ss_dssp HHHHTTTEECSCCCGGGEEECTT--SCCEEECCCTTCEEC---
T ss_pred HHHHHCCceecccCHHHEEEeCC--CCEEEEeeCCCCeEccCC
Confidence 89999999999999999999865 5 6999999999988653
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-17 Score=181.95 Aligned_cols=147 Identities=14% Similarity=0.155 Sum_probs=99.7
Q ss_pred ccccc-cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 118 FMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 118 f~~~d-~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
++++. .+.||+|+||.||+|+++ ..||||+.+...... +.. -
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~-----------------------------~~~------~ 77 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP-----------------------------EQF------Q 77 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCH-----------------------------HHH------H
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCH-----------------------------HHH------H
Confidence 33443 367999999999999975 369999976421110 000 0
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
.|.+|++.+.++++- .-|.+-.+......+||||||+|++|.+........++...+...+.+
T Consensus 78 ~f~~E~~il~~l~Hp-----------------NIV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~q 140 (307)
T 3omv_A 78 AFRNEVAVLRKTRHV-----------------NILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140 (307)
T ss_dssp HHHHHHHHHTTCCCT-----------------TBCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-----------------CEeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHH
Confidence 255677766655321 112221222245678999999999998865433345666666666665
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+. +..+|..||+|||+||.|||++.+ +.++|+|||+++.++.
T Consensus 141 ia~gL~yLH~~~IiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 141 TAQGMDYLHAKNIIHRDMKSNNIFLHEG--LTVKIGDFGLATVKSR 184 (307)
T ss_dssp HHHHHHHHHHTTCBCSCCCSSSEEEETT--EEEEECCCSSCBC---
T ss_pred HHHHHHHHHHCCccCCccCHHHEEECCC--CcEEEeeccCceeccc
Confidence 55 888999999999999999999965 8999999999987654
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-17 Score=181.55 Aligned_cols=180 Identities=17% Similarity=0.152 Sum_probs=118.9
Q ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhH
Q 002092 81 EPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIIL 159 (968)
Q Consensus 81 ~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~ 159 (968)
.+.-.....|.-..++++.+++++.++..++.+....+-++. ++||+|++|+||+|+.+ +|+.||||+.++.......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~ 87 (321)
T 2c30_A 9 SGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSY-VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE 87 (321)
T ss_dssp ----------------CCHHHHHHHHHTTSCSSCHHHHEEEE-EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHH
T ss_pred chhhhhccceeecCCcCcHHHHHHHHhhccCCCCchhhhhcc-EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHH
Confidence 334444556777778999999999999988876554443333 48999999999999985 8999999998764321100
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee
Q 002092 160 EDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ 238 (968)
Q Consensus 160 ~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~ 238 (968)
.+.+|+..+.++++ +. +.+-..+.
T Consensus 88 -------------------------------------~~~~E~~~l~~l~h------------------~niv~~~~~~~ 112 (321)
T 2c30_A 88 -------------------------------------LLFNEVVIMRDYQH------------------FNVVEMYKSYL 112 (321)
T ss_dssp -------------------------------------HHHHHHHHHTTCCC------------------TTBCCEEEEEE
T ss_pred -------------------------------------HHHHHHHHHHhCCC------------------CCcceEEEEEE
Confidence 12345555443321 11 11222222
Q ss_pred -cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 -~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....+|||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++
T Consensus 113 ~~~~~~lv~e~~~~~~L~~~l--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~ 188 (321)
T 2c30_A 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD--GRVKLSDFGFC 188 (321)
T ss_dssp ETTEEEEEECCCCSCBHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTC
T ss_pred ECCEEEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC--CcEEEeeeeee
Confidence 56678999999999988763 344566666666666655 888999999999999999999865 89999999998
Q ss_pred cccCH
Q 002092 316 KKLSS 320 (968)
Q Consensus 316 ~~l~~ 320 (968)
..+..
T Consensus 189 ~~~~~ 193 (321)
T 2c30_A 189 AQISK 193 (321)
T ss_dssp EECCS
T ss_pred eeccc
Confidence 87654
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.9e-17 Score=175.90 Aligned_cols=143 Identities=17% Similarity=0.262 Sum_probs=90.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+. .+|+.||||+.+......- + .+-.+.+|+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~--~--------------------------------~~~~~~~Ei 64 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--D--------------------------------MQGRIEREI 64 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC----------------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH--H--------------------------------HHHHHHHHH
Confidence 5799999999999997 5899999999865421100 0 001245666
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-|.+-.++. ...-+|||||++| +|.+... ....++...+...+.+++ +
T Consensus 65 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmEy~~g-~L~~~l~-~~~~l~e~~~~~~~~qi~~al 125 (275)
T 3hyh_A 65 SYLRLLRH-----------------PHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV-QRDKMSEQEARRFFQQIISAV 125 (275)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCE-EHHHHHH-HSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCCCeEEEEEEECCEEEEEEeCCCC-CHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 66666532 11233333443 4556899999954 5555432 234566666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|.+|++|||+||+|||++.+ +.++|+|||+++..++.
T Consensus 126 ~ylH~~~IiHRDiKP~NILl~~~--~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 126 EYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTDG 165 (275)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTT--CCEEECCSSCC------
T ss_pred HHHHHCCcccccCChHHeEECCC--CCEEEeecCCCeecCCC
Confidence 88999999999999999999865 89999999999876543
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-17 Score=178.32 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=101.8
Q ss_pred CCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHH
Q 002092 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (968)
Q Consensus 111 g~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (968)
|...+.-|..|+ +.||+|+||.||+|+. .+|+.||||+........ .+ .
T Consensus 20 ~~~~~gr~~~~~-~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~---------------------------~ 69 (290)
T 3fpq_A 20 GMSNDGRFLKFD-IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SE---------------------------R 69 (290)
T ss_dssp EECTTSSEEEEE-EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH---------------------------H
T ss_pred CcCCCCceEEee-eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HH---------------------------H
Confidence 433344444555 3699999999999997 479999999875421100 00 0
Q ss_pred HhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-----CCCeEEecccCCCCCCCHHHHHhcC
Q 002092 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEAFG 264 (968)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~~~ 264 (968)
-.|.+|++.+.++++ ..-|.+-.++.+ ..-+||||||+|++|.+... ....
T Consensus 70 ------~~~~~E~~il~~l~H-----------------pnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~-~~~~ 125 (290)
T 3fpq_A 70 ------QRFKEEAEMLKGLQH-----------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKV 125 (290)
T ss_dssp ------HHHHHHHHHHHTCCC-----------------TTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHH-HHSS
T ss_pred ------HHHHHHHHHHHhCCC-----------------CCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHH-hcCC
Confidence 024567776666532 111222233321 12479999999999988754 2334
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++...+...+.+++ +..+|.+| |+|||+||+|||++.+ +|.++|+|||+++...
T Consensus 126 l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~-~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECC-CCCEEEEeCcCCEeCC
Confidence 56555555554544 78889988 9999999999999742 4899999999987543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-16 Score=170.28 Aligned_cols=185 Identities=16% Similarity=0.219 Sum_probs=120.3
Q ss_pred ccccccceeEEEEEEe-CCCCE--EEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~--VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
++||+|++|+||+|+. .+|+. ||||+.+++....-..+ ........+..+. ....-..+..+.+
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~ 119 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMD-----------EYLYGDERFDMRR--ISPKEKVFIWTEK 119 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------G-----------GGTTTCTTSCC------CHHHHHHHHHH
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHH-----------Hhhcccchhhhhc--cChHHHHHHHHHH
Confidence 5899999999999998 68999 99999887642110000 0000001111110 0000112234678
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccC--CCCCCCHHHHHhc--CCCHHHHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAF--GVNKQKVVEEITR 276 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~--G~~L~~~~~~~~~--~~~~~~l~~~l~~ 276 (968)
|++++.++.+. ++.+|.++.....+|||||+. |.....+...... ......++..++.
T Consensus 120 E~~~l~~l~~~------------------~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~ 181 (258)
T 1zth_A 120 EFRNLERAKEA------------------GVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVE 181 (258)
T ss_dssp HHHHHHHHHHT------------------TCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHhC------------------CCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHH
Confidence 88999888752 356788887778899999994 3333333222111 1234556666655
Q ss_pred HHHHHHH-hcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCcc
Q 002092 277 AYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (968)
Q Consensus 277 ~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (968)
. +..+| ..|++|||+||+|||++. +++|+|||++..++...... .+.+|.+.+.+.+..+|+.
T Consensus 182 ~-l~~lH~~~givHrDlkp~NILl~~----~~~liDFG~a~~~~~~~~~~-------~l~rd~~~~~~~f~~~g~~ 245 (258)
T 1zth_A 182 N-VKRLYQEAELVHADLSEYNIMYID----KVYFIDMGQAVTLRHPMAES-------YLERDVRNIIRFFSKYGVK 245 (258)
T ss_dssp H-HHHHHHTSCEECSSCSTTSEEESS----SEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHTTTCC
T ss_pred H-HHHHHHHCCEEeCCCCHHHEEEcC----cEEEEECcccccCCCccHHH-------HHHHHHHHHHHHHHHcCCC
Confidence 4 56789 999999999999999973 79999999999886554332 3578888899999989875
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4e-17 Score=179.78 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=96.4
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+++ +|+.||||+.+..-.+. .-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------------------------------------~~~ 61 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA-------------------------------------RKD 61 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHH-------------------------------------HHH
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHH-------------------------------------HHH
Confidence 67999999999999864 57899999986432110 012
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh------------cC
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------FG 264 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------~~ 264 (968)
|.+|++.+.+++| ..-|.+-.++. ....+||||||+|++|.++..... ..
T Consensus 62 f~~E~~il~~l~H-----------------pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~ 124 (299)
T 4asz_A 62 FHREAELLTNLQH-----------------EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124 (299)
T ss_dssp HHHHHHHHTTCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCC
T ss_pred HHHHHHHHHhCCC-----------------CCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCC
Confidence 5567777665532 11122223332 355689999999999988753211 13
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 125 l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~ 180 (299)
T 4asz_A 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN--LLVKIGDFGMSRDVYS 180 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC--CcEEECCcccceecCC
Confidence 55555555555544 788999999999999999999876 8999999999976543
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-17 Score=181.05 Aligned_cols=141 Identities=20% Similarity=0.202 Sum_probs=93.5
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|+||.||+|+.. +|+.||||+.+......- ....+.
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-----------------------------------~~~~~~ 74 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-----------------------------------DRVRTK 74 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-----------------------------------ECC---
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-----------------------------------HHHHHH
Confidence 57999999999999862 578999999865321100 011233
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
+|++.+.++. ++. |.+-.++. .+..+||||||+|++|.+... ....++...+...+.++
T Consensus 75 ~E~~il~~l~------------------HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi 135 (304)
T 3ubd_A 75 MERDILVEVN------------------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAEL 135 (304)
T ss_dssp ---CCCCCCC------------------CTTEECEEEEEEETTEEEEEECCCTTCEEHHHHH-HHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCC------------------CCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHH-hcCCCCHHHHHHHHHHH
Confidence 3433222221 222 23333333 456789999999999988754 23346666665555555
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 136 ~~aL~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 136 ALALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESID 178 (304)
T ss_dssp HHHHHHHHHTTCCCSSCCGGGEEECTT--SCEEEESSEEEEC---
T ss_pred HHHHHHHHHCCCcCCCCCHHHeEEcCC--CCEEecccccceeccC
Confidence 4 888999999999999999999865 8999999999986543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.2e-17 Score=179.30 Aligned_cols=142 Identities=19% Similarity=0.175 Sum_probs=92.8
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+++ +|+.||||+.+..-... .-+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------------------------------------~~~ 89 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-------------------------------------RQD 89 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHH-------------------------------------HHH
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHH-------------------------------------HHH
Confidence 57999999999999864 58899999986432110 012
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH--------------h
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE--------------A 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~--------------~ 262 (968)
|.+|++.+.+++| ..-|.+-.++. ....+||||||+|++|.++.... .
T Consensus 90 f~~E~~il~~l~H-----------------pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~ 152 (329)
T 4aoj_A 90 FQREAELLTMLQH-----------------QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152 (329)
T ss_dssp HHHHHHHHTTCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------C
T ss_pred HHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccC
Confidence 5667777665532 11122222222 34568999999999998764211 1
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..++...+...+.++. +..+|..||+|||+||.|||++.+ +.++|.|||+++.+...
T Consensus 153 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~--~~~Ki~DFGla~~~~~~ 211 (329)
T 4aoj_A 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG--LVVKIGDFGMSRDIYST 211 (329)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT--TEEEECCCC--------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC--CcEEEcccccceeccCC
Confidence 1245555555555544 788999999999999999999965 89999999999876543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-16 Score=176.14 Aligned_cols=142 Identities=14% Similarity=0.162 Sum_probs=98.5
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|++. +++.||||+.+....... . -+
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~--------------------------~----------~~ 75 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL--------------------------R----------EE 75 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-C--------------------------H----------HH
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHH--------------------------H----------HH
Confidence 46999999999999863 578999999865432111 0 12
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH---------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE--------------- 261 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~--------------- 261 (968)
|++|+..+.++++ ..-|.+-.++. ....+||||||+|++|.++....
T Consensus 76 f~~E~~il~~l~H-----------------pNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~ 138 (308)
T 4gt4_A 76 FRHEAMLRARLQH-----------------PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138 (308)
T ss_dssp HHHHHHHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCE
T ss_pred HHHHHHHHHhCCC-----------------CCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCcccccccccccccc
Confidence 5667777776543 11122222222 45568999999999998875321
Q ss_pred hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 262 AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 262 ~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
...++...+...+.++. +..+|..|++|||+||.||||+.+ +.++|.|||+++.+..
T Consensus 139 ~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~--~~~Ki~DFGlar~~~~ 197 (308)
T 4gt4_A 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK--LNVKISDLGLFREVYA 197 (308)
T ss_dssp ECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCSCCBCGGGG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC--CCEEECCcccceeccC
Confidence 11245555555555544 888999999999999999999976 8999999999987644
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=179.88 Aligned_cols=181 Identities=14% Similarity=0.242 Sum_probs=120.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+||+|++|.||+|+..+|++|||||.+++.... +..+-+ +....-...+.. ...+....|
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~---------------~~~~~~~~~~~~--~~rl~A~kE 163 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRD---------------YLRNRSTGSWMY--LSRLAAIKE 163 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CE---------------ECTTSCHHHHHH--HHHHHHHHH
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHH---------------HHHhhccccHHH--HHHHHHHHH
Confidence 5899999999999999999999999998764321 000000 000000000000 011122467
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (968)
.+|+.++.+. ++.+|+++...+.+||||||+|.++.++.. ..+...+...++.. +..
T Consensus 164 ~~nL~rL~~~------------------gv~vp~p~~~~~~~LVME~i~G~~L~~l~~----~~~~~~l~~qll~~-l~~ 220 (397)
T 4gyi_A 164 FAFMKALYEE------------------GFPVPEPIAQSRHTIVMSLVDALPMRQVSS----VPDPASLYADLIAL-ILR 220 (397)
T ss_dssp HHHHHHHHHT------------------TCSCCCEEEEETTEEEEECCSCEEGGGCCC----CSCHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHhc------------------CCCCCeeeeccCceEEEEecCCccHhhhcc----cHHHHHHHHHHHHH-HHH
Confidence 8888888652 467899888778899999999998876522 12455666666655 567
Q ss_pred HHhcCccccCCCCCceEEecCCCC--------ceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHH-HcCcc
Q 002092 282 IYVDGFFNGDPHPGNFLVSKDPPH--------RPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGLR 351 (968)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g--------~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~g~~ 351 (968)
+|..|+||||+||.|||+++++++ .+++|||+.+...+...-.. ++.+|...+.+.|. +.++.
T Consensus 221 lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~a~~-------~l~RDv~ni~~fF~kk~~~~ 292 (397)
T 4gyi_A 221 LAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPNAEM-------YFDRDVQCIKRFFERRFHFV 292 (397)
T ss_dssp HHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCCChHH-------HHHHHHHHHHHHHHhccCCc
Confidence 899999999999999999875221 38999999987765432222 35677888888875 34654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-16 Score=175.05 Aligned_cols=144 Identities=13% Similarity=0.097 Sum_probs=86.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+. .+|+.||||+.+..-.+.. .+ .+.+|+
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~------------------------------~~------~~~~E~ 54 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA------------------------------RE------KVMREV 54 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHH------------------------------HH------HHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHH------------------------------HH------HHHHHH
Confidence 5799999999999997 4899999998752211100 00 134566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cC------------CCeEEecccCCCCCCCHHHHHh--cCCCH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------------ETVLILEFMDGIRLNDCESLEA--FGVNK 267 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------------~~vLVmE~i~G~~L~~~~~~~~--~~~~~ 267 (968)
+.+.++.+ ..-|.+-.++. .+ .-+||||||+|.+|.++..... ...+.
T Consensus 55 ~il~~l~H-----------------pnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~ 117 (299)
T 4g31_A 55 KALAKLEH-----------------PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117 (299)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHH
Confidence 55554422 11122222221 11 1379999999999987643110 01222
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
..+...+.+++ +..+|..|++|||+||+|||++.+ |.++|+|||+++.++...
T Consensus 118 ~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~--~~vKl~DFGla~~~~~~~ 172 (299)
T 4g31_A 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--DVVKVGDFGLVTAMDQDE 172 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCCCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCC--CcEEEccCccceecCCCc
Confidence 33333333433 788999999999999999999865 899999999999886543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-16 Score=175.44 Aligned_cols=75 Identities=17% Similarity=0.232 Sum_probs=60.6
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc--------CccccCCCCCceEEecCCCCceEEEe
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--------GFFNGDPHPGNFLVSKDPPHRPILLD 311 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~--------G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (968)
.+|||||++|++|.+.. ...+++.........++. +..+|.+ ||+|||+||.|||++.+ +.++|+|
T Consensus 76 ~~lV~Ey~~~gsL~~~l--~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~--~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT--SCEEECC
T ss_pred EEEEecCCCCCcHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC--CCEEEEe
Confidence 48999999999998874 455667666666555554 7778866 99999999999999865 8999999
Q ss_pred cccccccCH
Q 002092 312 FGLTKKLSS 320 (968)
Q Consensus 312 FG~~~~l~~ 320 (968)
||+++.+..
T Consensus 152 FGla~~~~~ 160 (303)
T 3hmm_A 152 LGLAVRHDS 160 (303)
T ss_dssp CTTCEEEET
T ss_pred CCCCccccC
Confidence 999887643
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=172.90 Aligned_cols=137 Identities=16% Similarity=0.234 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|+||+||+|+.+ +++.||||+..+.-.. ..+.
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~---------------------------------------~~~~ 67 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP---------------------------------------IRIA 67 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH---------------------------------------HHHH
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH---------------------------------------HHHH
Confidence 57999999999999853 5789999987543110 0112
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|.+.+..+.+ ...-+.+-.++. ...-+|||||++|.+|.+.. ..++...+...+.+++
T Consensus 68 ~E~~~l~~~~~----------------h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~----~~l~~~~~~~~~~qll 127 (361)
T 4f9c_A 68 AELQCLTVAGG----------------QDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLF 127 (361)
T ss_dssp HHHHHHHHTCS----------------BTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH----TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC----------------CCCCceEEEEEEECCEEEEEEeCCCcccHHHHH----cCCCHHHHHHHHHHHH
Confidence 34333333211 011223333443 45668999999998887653 2355555555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ .+.++|+|||+++.+.+
T Consensus 128 ~al~ylH~~gIiHRDiKPeNiLl~~~-~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 128 KALKRIHQFGIVHRDVKPSNFLYNRR-LKKYALVDFGLAQGTHD 170 (361)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECTT
T ss_pred HHHHHHHHCCeEeCcCCHHHeEEeCC-CCeEEECcCCCCcccCC
Confidence 888999999999999999999854 37899999999986643
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.60 E-value=9.5e-16 Score=174.59 Aligned_cols=208 Identities=13% Similarity=0.082 Sum_probs=123.0
Q ss_pred HhcCCCCCCHHHHHHHHHHh-hcCCCCCHHHHHHHHHhhhCCCccccc----------cccc-cccccccceeEEEEEEe
Q 002092 72 LSTRADVLPEPYISLLKQLQ-DSLPPRPVQEVSQTIEREFGESMGGMF----------MDFV-ETPLATASIAQVHRATL 139 (968)
Q Consensus 72 ls~r~dllp~~~~~~L~~Lq-d~~p~~~~~~v~~~l~~elg~~~~~~f----------~~~d-~~plgsaSigqV~~A~l 139 (968)
-|++.|++++++.+.+..++ +.+++.+...+...+..++- +.+..+ ..+. .+.||+|++|+||+|+.
T Consensus 16 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~ 94 (377)
T 3byv_A 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLW-NTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATD 94 (377)
T ss_dssp -CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTC-C-CCEEEEEESSSCCCEEEEEEEEEEEETTEEEEEEEC
T ss_pred CCCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhc-CCCCcEEEEeecCCCCceEEEcceeecCCCEEEEEEEE
Confidence 37888999999999999999 99999999999988887662 222222 2222 47899999999999996
Q ss_pred -CCCCEEEEEEecCChh------hhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHh
Q 002092 140 -VDGRQVVVKVQHQGIK------TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANL 212 (968)
Q Consensus 140 -~~G~~VAVKV~~p~i~------~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~ 212 (968)
.+|+.||||+.+.... +.+..++.+++. ...+ .-.|+.++...+
T Consensus 95 ~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-------------------------l~~l----~hpniv~~~~~~ 145 (377)
T 3byv_A 95 QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRL-------------------------LRGI----KNQKQAKVHLRF 145 (377)
T ss_dssp -CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGG-------------------------STTC----CSHHHHHHHHCB
T ss_pred CCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHh-------------------------cccc----CCHHHHHHHhhh
Confidence 5799999999764311 111111111100 0000 013454444322
Q ss_pred cCCC-CCCCCCC-----CCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCH-------HHHHHHHHHHH-
Q 002092 213 GCKN-KHEDSNK-----KPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNK-------QKVVEEITRAY- 278 (968)
Q Consensus 213 ~~~~-~~~~~~~-----~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~-------~~l~~~l~~~~- 278 (968)
.... .+..... .......+.++ ..+|||||++ ++|.++...... ... ..+...+.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~------~~~lv~E~~~-g~L~~~l~~~~~-~~~~~~~l~~~~~~~i~~qi~~ 217 (377)
T 3byv_A 146 IFPFDLVKDPQKKKMIRVRLDERDMWVL------SRFFLYPRMQ-SNLQTFGEVLLS-HSSTHKSLVHHARLQLTLQVIR 217 (377)
T ss_dssp CCCSEEEECTTSCSEEEC------CEEE------SEEEEEECCS-EEHHHHHHHHHH-TTTTTHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccCCccccccccCCCceEEE------EEEEEEeccC-CCHHHHHHhccc-cccccccccHHHHHHHHHHHHH
Confidence 1000 0000000 00000011111 2569999995 477776442211 111 22222333333
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||+|||++.+ ++++|+|||+++...
T Consensus 218 aL~~LH~~~ivHrDikp~NIll~~~--~~~kL~DFG~a~~~~ 257 (377)
T 3byv_A 218 LLASLHHYGLVHTYLRPVDIVLDQR--GGVFLTGFEHLVRDG 257 (377)
T ss_dssp HHHHHHHTTEECSCCCGGGEEECTT--CCEEECCGGGCEETT
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEechhheecC
Confidence 778899999999999999999965 899999999988543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-15 Score=163.73 Aligned_cols=173 Identities=17% Similarity=0.212 Sum_probs=114.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|+||+|+..+|+.||||+.+++....- +....+.. +...++. .....+.+|.+
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~--~~~~~~~~----------~~~~w~~-------~~~~~~~~E~~ 156 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFK--KVKEKRDY----------GDLHFSV-------LAIRSARNEFR 156 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC--------CCCC-----------------CHHH-------HHHHHHHHHHH
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchh--hhhhhhhh----------cchhhHH-------HHHHHHHHHHH
Confidence 68999999999999998899999999876532110 00000000 0000000 11223566777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
.+.++. + +.+|.++..+..++||||++|.+|.++ . ......++..++.. +..+|
T Consensus 157 ~l~~l~-~-------------------~~v~~~~~~~~~~lvmE~~~g~~L~~l-~----~~~~~~i~~qi~~~-l~~lH 210 (282)
T 1zar_A 157 ALQKLQ-G-------------------LAVPKVYAWEGNAVLMELIDAKELYRV-R----VENPDEVLDMILEE-VAKFY 210 (282)
T ss_dssp HHHHTT-T-------------------SSSCCEEEEETTEEEEECCCCEEGGGC-C----CSCHHHHHHHHHHH-HHHHH
T ss_pred HHHhcc-C-------------------CCcCeEEeccceEEEEEecCCCcHHHc-c----hhhHHHHHHHHHHH-HHHHH
Confidence 776653 1 456666666777999999999998873 1 12344566655554 66789
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHH-HHcCcc
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF-AEMGLR 351 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~-~~~g~~ 351 (968)
..|++|||+||+|||++ + ++++|+|||+++..+...... +..+|.+.+.+.+ ...|+.
T Consensus 211 ~~giiHrDlkp~NILl~-~--~~vkl~DFG~a~~~~~~~a~e-------~l~rdv~~i~~~f~~~~~~~ 269 (282)
T 1zar_A 211 HRGIVHGDLSQYNVLVS-E--EGIWIIDFPQSVEVGEEGWRE-------ILERDVRNIITYFSRTYRTE 269 (282)
T ss_dssp HTTEECSCCSTTSEEEE-T--TEEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHHHHCCC
T ss_pred HCCCEeCCCCHHHEEEE-C--CcEEEEECCCCeECCCCCHHH-------HHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999 5 899999999999876543322 2356777777777 566654
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.1e-15 Score=169.79 Aligned_cols=143 Identities=17% Similarity=0.137 Sum_probs=98.1
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+.+ +++.||||+.+.+....- .-+
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~------------------------------------~~~ 113 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE------------------------------------HRA 113 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHH------------------------------------HHH
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHH------------------------------------HHH
Confidence 58999999999999863 347899999875432110 012
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHh-------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (968)
|.+|++.+.++.+. ..-|.+-.++. ....+||||||+|++|.++.....
T Consensus 114 ~~~E~~il~~l~hh----------------pnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~ 177 (353)
T 4ase_A 114 LMSELKILIHIGHH----------------LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177 (353)
T ss_dssp HHHHHHHHHHHCCC----------------TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------
T ss_pred HHHHHHHHHHcCCC----------------CcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhh
Confidence 45677777776431 01122222222 234589999999999988754221
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.++. +..+|..|++||||||.|||++.+ +.++|+|||+++.+..
T Consensus 178 ~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~--~~vKi~DFGlar~~~~ 237 (353)
T 4ase_A 178 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYK 237 (353)
T ss_dssp CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTTT
T ss_pred ccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC--CCEEECcchhhhhccc
Confidence 1234455555444444 788999999999999999999976 8999999999987643
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.6e-15 Score=170.64 Aligned_cols=141 Identities=16% Similarity=0.247 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+...... .+ .+ .+.+|+
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~--~~---------------------------~~------~~~~Ei 104 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TN---------------------------AK------RTLREL 104 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH--HH---------------------------HH------HHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccch--HH---------------------------HH------HHHHHH
Confidence 5799999999999997 489999999985322110 00 00 133466
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
+.+.++++- .-|.+-.++. ...-+||||||+| .|.+... ....++...+...+.
T Consensus 105 ~il~~l~Hp-----------------nIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~-~~~~l~~~~~~~~~~ 165 (398)
T 4b99_A 105 KILKHFKHD-----------------NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIH-SSQPLTLEHVRYFLY 165 (398)
T ss_dssp HHHHHCCCT-----------------TBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHT-SSSCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHH-hcCCCCHHHHHHHHH
Confidence 666655321 1122222221 1345899999986 3444321 223455555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++||||||+|||++.+ |.++|+|||+++.+..
T Consensus 166 qil~al~ylH~~~iiHRDlKP~NIl~~~~--~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNEN--CELKIGDFGMARGLCT 210 (398)
T ss_dssp HHHHHHHHHHHTTCBCCCCCGGGEEECTT--CCEEECCCTTCBCC--
T ss_pred HHHHHHHHHHHCcCcCCCcCccccccCCC--CCEEEeecceeeeccc
Confidence 544 788999999999999999999865 8999999999987754
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.55 E-value=5.5e-15 Score=177.12 Aligned_cols=145 Identities=15% Similarity=0.096 Sum_probs=95.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||.||+|+.+ +|+.||||+++...-.. .+ .+....+|.
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~--~~--------------------------------~~~~~~~E~ 240 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQ--------------------------------GETLALNER 240 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch--hh--------------------------------hHHHHHHHH
Confidence 68999999999999974 79999999975321000 00 000011121
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..+..++ .. +++. |.+-..+. ....+||||||+|++|.+... ....++...+...+.+++
T Consensus 241 ~~l~ll~-~~--------------~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~-~~~~l~E~~a~~y~~qIl~a 304 (689)
T 3v5w_A 241 IMLSLVS-TG--------------DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 304 (689)
T ss_dssp HHHHHHS-SS--------------CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHh-hC--------------CCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 1111111 11 1222 22223333 455689999999999987653 233466655555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..||+||||||+|||++.+ |.++|+|||+++.++.
T Consensus 305 L~yLH~~gIiHRDLKPeNILld~~--G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 305 LEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSK 344 (689)
T ss_dssp HHHHHTTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHCCccccCCchHHeEEeCC--CCEEecccceeeecCC
Confidence 888999999999999999999966 8999999999988754
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.54 E-value=4.6e-15 Score=165.91 Aligned_cols=173 Identities=16% Similarity=0.150 Sum_probs=95.5
Q ss_pred hhcCCCCCHHHHHHHHHhhhCCCcccccccccc----------ccccccceeEEEEEEeCC-----CCEEEEEEecCChh
Q 002092 91 QDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE----------TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIK 155 (968)
Q Consensus 91 qd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~----------~plgsaSigqV~~A~l~~-----G~~VAVKV~~p~i~ 155 (968)
++..+.-+.......++...+.++.+.+..|.. +.||+|++|+||+|+.+. +..||||+.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~ 86 (333)
T 1mqb_A 7 HHHHDYDIPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT 86 (333)
T ss_dssp -------------------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC
T ss_pred ccccccCCCCCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC
Confidence 345555666677777777777777777666655 789999999999998742 34699999876532
Q ss_pred hhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeee
Q 002092 156 TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE 235 (968)
Q Consensus 156 ~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~ 235 (968)
... +.++.+|++.+.++.+ + .|++
T Consensus 87 ~~~------------------------------------~~~~~~E~~~l~~l~h------------------~--~iv~ 110 (333)
T 1mqb_A 87 EKQ------------------------------------RVDFLGEAGIMGQFSH------------------H--NIIR 110 (333)
T ss_dssp HHH------------------------------------HHHHHHHHHHHHTCCC------------------T--TBCC
T ss_pred HHH------------------------------------HHHHHHHHHHHHhCCC------------------C--CCCc
Confidence 111 1123445555544321 1 1333
Q ss_pred eee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEE
Q 002092 236 VIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPIL 309 (968)
Q Consensus 236 v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~L 309 (968)
++. ....+|||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|
T Consensus 111 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl 188 (333)
T 1mqb_A 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN--LVCKV 188 (333)
T ss_dssp EEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEE
T ss_pred EEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCC--CcEEE
Confidence 332 3556899999999999887543334466666666666655 888999999999999999999865 89999
Q ss_pred EecccccccCHH
Q 002092 310 LDFGLTKKLSSS 321 (968)
Q Consensus 310 iDFG~~~~l~~~ 321 (968)
+|||++..+...
T Consensus 189 ~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 189 SDFGLSRVLEDD 200 (333)
T ss_dssp CCCCC-------
T ss_pred CCCCcchhhccc
Confidence 999999877543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.54 E-value=4.7e-15 Score=177.85 Aligned_cols=143 Identities=22% Similarity=0.323 Sum_probs=98.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||.||+|+.+ +|+.||||+.+..-.. +. + .+.+|.
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~----~~---------------------------~------~~~~Ei 205 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DK---------------------------E------TVRKEI 205 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----HH---------------------------H------HHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchh----hH---------------------------H------HHHHHH
Confidence 57999999999999974 8999999987532111 00 0 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+..+++ ..-|.+-.++. ....+||||||+|++|.+........++...+...+.+++ +
T Consensus 206 ~il~~l~h-----------------pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al 268 (573)
T 3uto_A 206 QTMSVLRH-----------------PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268 (573)
T ss_dssp HHHHHTCC-----------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 55555432 11233334444 5566899999999988665321222345555555444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.+..+.++|+|||+++.+++
T Consensus 269 ~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred HHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 88999999999999999999865458999999999998764
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.7e-15 Score=162.10 Aligned_cols=169 Identities=16% Similarity=0.220 Sum_probs=95.7
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHH
Q 002092 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNA 165 (968)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l 165 (968)
|+.+|+..|| ...+++.-+..++....+.|... +.||+|++|.||+|+.+ +|+.||||+.+.... .
T Consensus 2 l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~--- 68 (314)
T 3com_A 2 LETVQLRNPP--RRQLKKLDEDSLTKQPEEVFDVL--EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------L--- 68 (314)
T ss_dssp ------------------------------CEEEE--EECC----CEEEEEEETTTCCEEEEEEEETTSC------C---
T ss_pred ccccccCCCC--ccchhhcCchhhhhcchhhhhhh--eeeccCCCeEEEEEEECCCCCEEEEEecCchHH------H---
Confidence 6778888887 45666777777777666666544 46999999999999975 699999998764211 0
Q ss_pred HHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCC
Q 002092 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSE 241 (968)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~ 241 (968)
. ++.+|++.+.++.+ + .|++++ . ...
T Consensus 69 --------------------~----------~~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~ 98 (314)
T 3com_A 69 --------------------Q----------EIIKEISIMQQCDS------------------P--HVVKYYGSYFKNTD 98 (314)
T ss_dssp --------------------H----------HHHHHHHHHHTCCC------------------T--TBCCEEEEEEETTE
T ss_pred --------------------H----------HHHHHHHHHHhCCC------------------C--CCccEEEEEEeCCE
Confidence 0 12234444433311 1 123333 2 455
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 99 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE--GHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECB
T ss_pred EEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCC--CCEEEeecccchhhh
Confidence 6899999999999887654445566666666555544 788999999999999999999865 899999999987664
Q ss_pred H
Q 002092 320 S 320 (968)
Q Consensus 320 ~ 320 (968)
.
T Consensus 177 ~ 177 (314)
T 3com_A 177 D 177 (314)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.6e-15 Score=177.89 Aligned_cols=146 Identities=18% Similarity=0.247 Sum_probs=94.5
Q ss_pred ccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 126 LATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 126 lgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
..+++.|+++.++. -.|+.|+||+...........+-+ .+.-. -+|++|++.
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~-------------------------~~~~~--~~~~~E~~~ 294 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEE-------------------------SQRNK--YELHNEIKF 294 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHH-------------------------HHHHH--HHHHHHHHH
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhh-------------------------hHHHH--HHHHHHHHH
Confidence 46777777777764 479999999987543221110000 00000 125667666
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHH
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (968)
+.++.+ ...||+++. ....+||||||+|.+|.+... +....+..+++..++.. +.
T Consensus 295 l~~~~~-------------------~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~-~~~~l~~~~I~~QIl~A-L~ 353 (569)
T 4azs_A 295 LTQPPA-------------------GFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA-AGEEIDREKILGSLLRS-LA 353 (569)
T ss_dssp HHSCCT-------------------TCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH-TTCCCCHHHHHHHHHHH-HH
T ss_pred HHhcCC-------------------CCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hCCCCCHHHHHHHHHHH-HH
Confidence 655422 345777764 456799999999999998754 23446777777766664 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|.+||+||||||+|||++.+ |+++|+|||+++.+...
T Consensus 354 ylH~~GIIHRDIKPeNILL~~d--g~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 354 ALEKQGFWHDDVRPWNVMVDAR--QHARLIDFGSIVTTPQD 392 (569)
T ss_dssp HHHHTTCEESCCCGGGEEECTT--SCEEECCCTTEESCC--
T ss_pred HHHHCCceeccCchHhEEECCC--CCEEEeecccCeeCCCC
Confidence 8999999999999999999865 89999999999887654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-14 Score=164.86 Aligned_cols=150 Identities=15% Similarity=0.230 Sum_probs=96.9
Q ss_pred ccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
+...|.....+.||+|++|+||+|+. .+|+.||||+.+..-... .
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~----~------------------------------ 130 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD----K------------------------------ 130 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHH----H------------------------------
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc----H------------------------------
Confidence 33444444457899999999999997 479999999987532110 0
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (968)
-.+.+|++.+.++++ + .|++++ . ....+|||||++|.+|.+........++..
T Consensus 131 ---~~~~~E~~~l~~l~h------------------p--nIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~ 187 (373)
T 2x4f_A 131 ---EEVKNEISVMNQLDH------------------A--NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187 (373)
T ss_dssp ---HHHHHHHHHHTTCCC------------------T--TBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHH
T ss_pred ---HHHHHHHHHHHhCCC------------------C--CCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHH
Confidence 013345544444321 1 123333 2 455689999999999877644333345655
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+...+.+++ +..+|..|++|||+||+|||+..+.+++++|+|||+++.+..
T Consensus 188 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 5555444444 788999999999999999999654458899999999987654
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5e-14 Score=154.85 Aligned_cols=139 Identities=14% Similarity=0.150 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+..-.... -.+.+|+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~E~ 68 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-------------------------------------ELIINEI 68 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCH-------------------------------------HHHHHHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHH-------------------------------------HHHHHHH
Confidence 5799999999999996 5899999998753221100 0123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-..+. ....++||||++|.+|.++. .....+...+...+.+++ +
T Consensus 69 ~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~l 129 (297)
T 3fxz_A 69 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 129 (297)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHH--HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------------CCCCeEeEEEEECCEEEEEEECCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 45678999999999998764 344566666665555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.|||++.+ ++++|+|||++..++.
T Consensus 130 ~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 130 EFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (297)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHhCCceeCCCCHHHEEECCC--CCEEEeeCCCceecCC
Confidence 88999999999999999999865 8999999999877654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.3e-14 Score=158.04 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=58.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHH-hcCccccCCCCCceEEecCCC-----------
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY-VDGFFNGDPHPGNFLVSKDPP----------- 304 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~-~~G~~H~D~hPgNIlv~~~~~----------- 304 (968)
....+|||||++|+++.+.. ....++...+...+.+++ +..+| ..|++|||+||+|||++.++.
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQM--RTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGG--TTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 45568999999988654432 223455555555555544 78899 899999999999999997620
Q ss_pred -------CceEEEecccccccCH
Q 002092 305 -------HRPILLDFGLTKKLSS 320 (968)
Q Consensus 305 -------g~i~LiDFG~~~~l~~ 320 (968)
..++|+|||+++.+..
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEEET
T ss_pred ccccCCCceEEEeeccccEecCC
Confidence 1899999999987753
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.5e-14 Score=160.74 Aligned_cols=141 Identities=19% Similarity=0.171 Sum_probs=94.3
Q ss_pred ccccccceeEEEEEE------eCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRAT------LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~------l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+ ..+|+.||||+.++.....+
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------------- 111 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEF--------------------------------------- 111 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHH---------------------------------------
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHH---------------------------------------
Confidence 479999999999994 35799999999887543322
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH----hcCCCHHHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE----AFGVNKQKVVE 272 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~----~~~~~~~~l~~ 272 (968)
..|.+.+.+++.... ...+.+-..+. ....+|||||++|.+|.++.... ...++...+..
T Consensus 112 -~~e~~~~~~l~~~~~--------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~ 176 (365)
T 3e7e_A 112 -YIGTQLMERLKPSMQ--------------HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVIS 176 (365)
T ss_dssp -HHHHHHHHHSCGGGG--------------GGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHH
T ss_pred -HHHHHHHHHhhhhhh--------------hhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHH
Confidence 222233333321100 01111212222 46678999999999998875432 23456666666
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEec---------CCCCceEEEeccccccc
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSK---------DPPHRPILLDFGLTKKL 318 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~---------~~~g~i~LiDFG~~~~l 318 (968)
.+.+++ +..+|..|++|||+||+|||++. +.++.++|+|||+++.+
T Consensus 177 i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~ 233 (365)
T 3e7e_A 177 FAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233 (365)
T ss_dssp HHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred HHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence 555554 88899999999999999999986 01389999999999654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.3e-14 Score=153.48 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=99.6
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+..+++.||||+.+...... -++.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 57 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 57 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccCH--------------------------------------HHHHHHHH
Confidence 6799999999999999889999999987543211 01344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++++ -.|++++. ....++||||++|.+|.+.........+...+...+.+++
T Consensus 58 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~ 117 (269)
T 4hcu_A 58 VMMKLSH--------------------PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117 (269)
T ss_dssp HHHTCCC--------------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC--------------------CCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHH
Confidence 5544421 12333332 3556899999999998877533333356666655555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 118 ~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 118 GMAYLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECGG--GCEEECCTTGGGGBCCH
T ss_pred HHHHHHhCCeecCCcchheEEEcCC--CCEEecccccccccccc
Confidence 888999999999999999999865 88999999999877553
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.48 E-value=4.6e-14 Score=153.39 Aligned_cols=138 Identities=18% Similarity=0.181 Sum_probs=97.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.++++.||||+.+...... -++.+|++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 71 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--------------------------------------DEFIEEAK 71 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 6899999999999999888999999987542210 01334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ -.|++++. ....++||||++|.+|.+........++...+...+.+++
T Consensus 72 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 131 (283)
T 3gen_A 72 VMMNLSH--------------------EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131 (283)
T ss_dssp HHHTCCC--------------------TTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHH
T ss_pred HHhcCCC--------------------CCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 4444321 11333332 3456899999999998877543334566666666655554
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 132 ~l~~lH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 132 AMEYLESKQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp HHHHHHHTTCCCSSCSGGGEEECTT--SCEEECSTTGGGGBCCH
T ss_pred HHHHHHHCCccCCCCccceEEEcCC--CCEEEcccccccccccc
Confidence 888999999999999999999865 89999999999877543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-14 Score=162.39 Aligned_cols=174 Identities=18% Similarity=0.230 Sum_probs=98.0
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhhCCCccccccccc-cccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhh
Q 002092 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFV-ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILED 161 (968)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d-~~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~D 161 (968)
+..++..+.|..+++-.+.+. ++...+.. ..|+ .+.||+|++|.||+|+++ +++.||||+.+.+......
T Consensus 16 ~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~-- 90 (373)
T 2qol_A 16 LPGLRTFVDPHTFEDPTQTVH-EFAKELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-- 90 (373)
T ss_dssp -----CCC-----------CT-TTSCBCCG--GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHH--
T ss_pred ccccccccCccccCCHHHHHH-HHHhhcCH--hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHH--
Confidence 344566666666665444332 33332221 2333 368999999999999874 5788999998764321110
Q ss_pred HHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---
Q 002092 162 LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--- 238 (968)
Q Consensus 162 l~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--- 238 (968)
-+|.+|++.+.++.+ + .|++++.
T Consensus 91 ----------------------------------~~~~~E~~~l~~l~h------------------~--niv~~~~~~~ 116 (373)
T 2qol_A 91 ----------------------------------RDFLGEASIMGQFDH------------------P--NIIRLEGVVT 116 (373)
T ss_dssp ----------------------------------HHHHHHHHHHTTCCC------------------T--TBCCEEEEEC
T ss_pred ----------------------------------HHHHHHHHHHHhCCC------------------C--CCCeEEEEEe
Confidence 023445555444321 1 2333332
Q ss_pred -cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 239 -~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
....+|||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++
T Consensus 117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a 194 (373)
T 2qol_A 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN--LVCKVSDFGLG 194 (373)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC---
T ss_pred eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC--CCEEECcCccc
Confidence 4567899999999999877542223456666655555544 788999999999999999999865 89999999999
Q ss_pred cccCHH
Q 002092 316 KKLSSS 321 (968)
Q Consensus 316 ~~l~~~ 321 (968)
+.+...
T Consensus 195 ~~~~~~ 200 (373)
T 2qol_A 195 RVLEDD 200 (373)
T ss_dssp ------
T ss_pred cccccC
Confidence 877543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.4e-14 Score=160.11 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=100.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.++..... ..-+|.+|+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 163 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD------------------------------------LKAKFLQEA 163 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHH------------------------------------HHTTTTHHH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHH------------------------------------HHHHHHHHH
Confidence 68999999999999985 89999999877543211 011355676
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ + .|.+++. ....+|||||++|.+|.+........++...+...+.++.
T Consensus 164 ~~l~~l~h------------------p--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 223 (377)
T 3cbl_A 164 RILKQYSH------------------P--NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223 (377)
T ss_dssp HHHTTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 66554421 1 1333332 3556899999999998887554434466666666555554
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++...
T Consensus 224 ~~l~~LH~~~ivHrDlkp~Nil~~~~--~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 224 AGMEYLESKCCIHRDLAARNCLVTEK--NVLKISDFGMSREEA 264 (377)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCGGGCEECT
T ss_pred HHHHHHHHCCcCCcccCHHHEEEcCC--CcEEECcCCCceecC
Confidence 788999999999999999999865 899999999987543
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.1e-14 Score=151.75 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=99.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.++++.||||+.+...... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 55 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--------------------------------------DEFFQEAQ 55 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH--------------------------------------HHHHHHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCcH--------------------------------------HHHHHHHH
Confidence 6899999999999999888899999987542210 01344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ -.|++++. ....++||||++|.+|.+........++...+...+.+++
T Consensus 56 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 115 (268)
T 3sxs_A 56 TMMKLSH--------------------PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCE 115 (268)
T ss_dssp HHHHCCC--------------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHH
T ss_pred HHHhCCC--------------------CCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 5555421 11233332 3456899999999999887654444467666666555554
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 116 ~l~~lH~~~i~H~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 116 GMAFLESHQFIHRDLAARNCLVDRD--LCVKVSDFGMTRYVL 155 (268)
T ss_dssp HHHHHHHTTEEESSCSGGGEEECTT--CCEEECCTTCEEECC
T ss_pred HHHHHHHCCeecCCcCcceEEECCC--CCEEEccCccceecc
Confidence 788999999999999999999865 899999999987654
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.47 E-value=5.9e-14 Score=155.75 Aligned_cols=78 Identities=14% Similarity=0.202 Sum_probs=57.1
Q ss_pred CeEEecccCCCCCCCHHHHHh--cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
.++||||++|.+|.++..... .......+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++.
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~ 213 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--DVVKVGDFGLVTA 213 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEE
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC--CCEEEeecCcccc
Confidence 589999999999887643111 1122222333333333 778999999999999999999865 8999999999998
Q ss_pred cCHH
Q 002092 318 LSSS 321 (968)
Q Consensus 318 l~~~ 321 (968)
+...
T Consensus 214 ~~~~ 217 (332)
T 3qd2_B 214 MDQD 217 (332)
T ss_dssp CSCC
T ss_pred cccc
Confidence 7654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=159.38 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=96.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+.... .. + ...-.++.|.
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~--~~------------------------------~--~~~~~~~~E~ 112 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM--LK------------------------------R--GEVSCFREER 112 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HH------------------------------H--GGGCCHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh--hh------------------------------H--HHHHHHHHHH
Confidence 67999999999999984 799999999753110 00 0 0111244555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+.++.+ + .|.+++ . ....+|||||++|.+|.+........++...+...+.+++
T Consensus 113 ~il~~~~h------------------p--~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~ 172 (412)
T 2vd5_A 113 DVLVNGDR------------------R--WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172 (412)
T ss_dssp HHHHHSCT------------------T--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHH
T ss_pred HHHHhcCC------------------C--CeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55443321 1 122332 2 4456899999999999877543223456555554444443
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 173 ~aL~~LH~~giiHrDLKp~NILld~~--g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 173 MAIDSVHRLGYVHRDIKPDNILLDRC--GHIRLADFGSCLKLRA 214 (412)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeeecccCHHHeeecCC--CCEEEeechhheeccC
Confidence 788999999999999999999865 8999999999987654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.47 E-value=7.1e-14 Score=155.57 Aligned_cols=142 Identities=17% Similarity=0.244 Sum_probs=97.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||+|+.+...... ..+.+|.
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~ 52 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ--------------------------------------VLVKKEI 52 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH--------------------------------------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccH--------------------------------------HHHHHHH
Confidence 57999999999999974 78999999876432110 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+..+.+ ..-+.+-.++. ....+|||||++|.+|.+........++...+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al 115 (321)
T 1tki_A 53 SILNIARH-----------------RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115 (321)
T ss_dssp HHHHHSCC-----------------TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 55544321 11122222332 4567899999999888765432222456666655555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.+.++.++|+|||++..+..
T Consensus 116 ~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 88999999999999999999864358999999999987643
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=6.9e-14 Score=153.09 Aligned_cols=142 Identities=21% Similarity=0.255 Sum_probs=95.6
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... + ++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------~----------~~ 58 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---------------------------R----------DF 58 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHH---------------------------H----------HH
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHH---------------------------H----------HH
Confidence 6799999999999984 3789999998875422110 0 13
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|++.+.++++ ..-+.+-.++. ....+|||||++|.+|.++.......++...+...+.
T Consensus 59 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 121 (295)
T 3ugc_A 59 EREIEILKSLQH-----------------DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121 (295)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHH
Confidence 345555444321 01122222222 2446899999999999887543333466666655555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 122 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 122 QICKGMEYLGTKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCCCSCC-----
T ss_pred HHHHHHHHHhcCCcccCCCCHhhEEEcCC--CeEEEccCcccccccCC
Confidence 544 788999999999999999999976 89999999999877543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.9e-14 Score=157.40 Aligned_cols=140 Identities=17% Similarity=0.175 Sum_probs=94.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+. -.+..|.
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~-~~~---------------------------------~~~~~E~ 74 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DDV---------------------------------ECTMTEK 74 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH-TTH---------------------------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch-hHH---------------------------------HHHHHHH
Confidence 68999999999999974 799999999864311000 000 0122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+.. ++ .|++++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 75 ~il~~~~~-----------------hp--~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~ 134 (353)
T 3txo_A 75 RILSLARN-----------------HP--FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEII 134 (353)
T ss_dssp HHHHHTTT-----------------CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CC--ceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 44333211 11 123333 2 455689999999998876643 233456655555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.|||++.+ |.++|+|||+++...
T Consensus 135 ~aL~~LH~~givHrDlkp~NILl~~~--g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 135 SALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCKEGI 175 (353)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCSC
T ss_pred HHHHHHHHCCCcccCCCHHHEEECCC--CCEEEccccceeecc
Confidence 788999999999999999999865 899999999998643
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.7e-14 Score=153.94 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=97.6
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+....-.... -.|.+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~-------------------------------------~~~~~E 57 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-------------------------------------RTFLKE 57 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHH-------------------------------------HHHHHH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHH-------------------------------------HHHHHH
Confidence 36899999999999997 4799999998754211100 013345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
++.+.++++ + .|++++ . ....++||||++|.+|.++.......++...+...+.++
T Consensus 58 ~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi 117 (310)
T 3s95_A 58 VKVMRCLEH------------------P--NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117 (310)
T ss_dssp HHHHTTCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------c--CcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHH
Confidence 554443321 1 123333 2 455789999999999988754323445555555555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
+ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+....
T Consensus 118 ~~al~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 118 ASGMAYLHSMNIIHRDLNSHNCLVREN--KNVVVADFGLARLMVDEK 162 (310)
T ss_dssp HHHHHHHHHTTEECSCCSTTSEEECTT--SCEEECCCTTCEECC---
T ss_pred HHHHHHHHhCCccCCCCCcCeEEECCC--CCEEEeecccceeccccc
Confidence 4 788999999999999999999865 899999999998876543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.4e-14 Score=155.62 Aligned_cols=140 Identities=18% Similarity=0.157 Sum_probs=97.5
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|+.+ .+..||||+.+.+...... -+|.
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~ 98 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR------------------------------------RDFL 98 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHH------------------------------------HHHH
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHH------------------------------------HHHH
Confidence 68999999999999974 3456999998754322110 0133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
+|++.+.++.+ + .|++++. ....+|||||++|.+|.++.......++...+...+.
T Consensus 99 ~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 158 (325)
T 3kul_A 99 SEASIMGQFDH------------------P--NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158 (325)
T ss_dssp HHHHHHTTCCC------------------T--TBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------C--CCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHH
Confidence 45544443321 1 1333332 4567899999999999877533333566666666555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+...
T Consensus 159 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSN--LVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCSSCEECC--
T ss_pred HHHHHHHHHHHCCeeCCCCCcceEEECCC--CCEEECCCCcccccccC
Confidence 544 788999999999999999999865 89999999999877653
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.2e-14 Score=152.45 Aligned_cols=152 Identities=18% Similarity=0.240 Sum_probs=100.3
Q ss_pred CCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHH
Q 002092 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (968)
Q Consensus 111 g~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (968)
|.-+.+-|.-. +.||+|++|.||+|+. .+|+.||||+.+...... .+..
T Consensus 6 g~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~~ 55 (294)
T 4eqm_A 6 GKIINERYKIV--DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK----------------------------EETL 55 (294)
T ss_dssp SSCEETTEEEE--EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC----------------------------HHHH
T ss_pred hhHhhccEEEE--EEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc----------------------------HHHH
Confidence 44444444333 5799999999999997 479999999875432110 0000
Q ss_pred HhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCC
Q 002092 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV 265 (968)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~ 265 (968)
+ .+.+|++.+.++.+ + .|++++. ....++||||++|.+|.++... ...+
T Consensus 56 ~------~~~~e~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~ 108 (294)
T 4eqm_A 56 K------RFEREVHNSSQLSH------------------Q--NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPL 108 (294)
T ss_dssp H------HHHHHHHHHTTCCB------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSC
T ss_pred H------HHHHHHHHHhcCCC------------------C--CCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHh-cCCC
Confidence 0 13344444433321 1 2333332 3456899999999999877532 2345
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+...+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 109 ~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 109 SVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSN--KTLKIFDFGIAKALSET 164 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCSSSTTC---
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEEeCCCccccccc
Confidence 6666655555544 788999999999999999999865 89999999999877543
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-13 Score=154.04 Aligned_cols=142 Identities=18% Similarity=0.251 Sum_probs=96.7
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+........ .+. . .+.+|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~---------------------------~------~~~~E 64 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TSL---------------------------Q------KLFRE 64 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH---------------------------H------HHHHH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HHH---------------------------H------HHHHH
Confidence 36899999999999997 589999999975432110 000 0 12345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.+..+++ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 65 ~~~l~~l~h-----------------pnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~a 126 (328)
T 3fe3_A 65 VRIMKILNH-----------------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSA 126 (328)
T ss_dssp HHHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEEEEEEECCEEEEEEECCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 555544421 01122222222 455689999999999877643 233456555555444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||+||+++.+ +.++|+|||++..+.
T Consensus 127 l~~lH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 127 VQYCHQKRIVHRDLKAENLLLDAD--MNIKIADFGFSNEFT 165 (328)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTT--SCEEECSTTCCGGGS
T ss_pred HHHHHHCCEeccCCCHHHEEEcCC--CCEEEeeccCceecC
Confidence 788999999999999999999865 899999999987654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=9.3e-14 Score=154.16 Aligned_cols=145 Identities=20% Similarity=0.280 Sum_probs=98.0
Q ss_pred ccccccc-cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhh
Q 002092 116 GMFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (968)
Q Consensus 116 ~~f~~~d-~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (968)
+....|+ .+.||+|++|.||+|+.++|+.||||+..+...... +
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------------------~-------- 80 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI---------------------------E-------- 80 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHH---------------------------H--------
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHH---------------------------H--------
Confidence 3334444 368999999999999988899999998766432110 0
Q ss_pred ccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh---cCCCH
Q 002092 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA---FGVNK 267 (968)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~ 267 (968)
.+.+|++.+.+++ ++ .|++++. ....++||||++|.+|.+...... ..++.
T Consensus 81 --~~~~E~~~l~~l~------------------h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 138 (321)
T 2qkw_B 81 --EFETEIETLSFCR------------------HP--HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSW 138 (321)
T ss_dssp --HHHHHHHGGGSCC------------------CT--TBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCH
T ss_pred --HHHHHHHHHHhCC------------------CC--CEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCH
Confidence 1223333332221 11 2333332 456789999999999987642111 12455
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 139 ~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN--FVPKITDFGISKKGT 190 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTT--CCEEECCCTTCEECS
T ss_pred HHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCC--CCEEEeecccccccc
Confidence 55555555444 788999999999999999999865 899999999987543
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=159.42 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=96.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+..... . -...-.+.+|.
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~----------------~------------------~~~~~~~~~E~ 120 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI----------------K------------------RSDSAFFWEER 120 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------------H------------------TCCCSTHHHHH
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh----------------h------------------hHHHHHHHHHH
Confidence 68999999999999985 7999999987531100 0 00111244555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+-..+. ....+|||||++|++|.++. ....++...+...+.+++ +
T Consensus 121 ~il~~l~h-----------------p~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l--~~~~~~e~~~~~~~~qi~~aL 181 (410)
T 3v8s_A 121 DIMAFANS-----------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLAL 181 (410)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHH--HHCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEECCEEEEEEeCCCCCcHHHHH--HcCCCCHHHHHHHHHHHHHHH
Confidence 55444321 01112222222 34568999999999998764 344566555544444443 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 182 ~~LH~~givHrDLKp~NILl~~~--g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 182 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 220 (410)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHCCeEeccCCHHHeeECCC--CCEEEeccceeEeecc
Confidence 88999999999999999999865 8999999999987654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=160.44 Aligned_cols=144 Identities=14% Similarity=0.101 Sum_probs=96.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+..... . -.....++.|.
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~----------------~------------------~~~~~~~~~E~ 125 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------------K------------------RAETACFREER 125 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH----------------H------------------TTTTCCHHHHH
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh----------------h------------------HHHHHHHHHHH
Confidence 68999999999999985 6899999987531100 0 00112245565
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+. .-+.+-..+. ....+|||||++|++|.+........++...+...+.+++ +
T Consensus 126 ~il~~~~hp-----------------~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL 188 (437)
T 4aw2_A 126 DVLVNGDSK-----------------WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI 188 (437)
T ss_dssp HHHHHSCTT-----------------TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 555443210 0111112222 4556899999999998876432223455555544444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 189 ~~LH~~giiHrDLKp~NILl~~~--g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 189 DSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCLKLME 227 (437)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHhCCeEecccCHHHeeEcCC--CCEEEcchhhhhhccc
Confidence 88999999999999999999865 8999999999976643
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=153.32 Aligned_cols=142 Identities=18% Similarity=0.145 Sum_probs=91.3
Q ss_pred ccccccceeEEEEEEe----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|+. .+|+.||||+.+......-. .....+.
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~~~ 69 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA---------------------------------KDTAHTK 69 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC----------------------------------------------
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhh---------------------------------hHHHHHH
Confidence 6799999999999997 47999999998754211000 0011234
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|.+.+.++++. .-+.+-..+. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 70 ~E~~~l~~l~hp-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 131 (327)
T 3a62_A 70 AERNILEEVKHP-----------------FIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEIS 131 (327)
T ss_dssp -HHHHHHHCCCT-----------------TBCCEEEEEECSSCEEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-----------------CccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHH
Confidence 455555544220 0111212222 4567899999999998776432 23355555554444443
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++..
T Consensus 132 ~al~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 132 MALGHLHQKGIIYRDLKPENIMLNHQ--GHVKLTDFGLCKES 171 (327)
T ss_dssp HHHHHHHHTTCCCCCCCTTTEEECTT--SCEEECCCSCC---
T ss_pred HHHHHHHhCCEEcccCCHHHeEECCC--CcEEEEeCCccccc
Confidence 788999999999999999999865 89999999998754
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=151.94 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=95.7
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|+||+|+. .+|+.||||+.++.....-. ...+.... .............-...-.+.+|
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQA---GFPRRPPP--------RGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC------------------------------------------CHHHHH
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhc---cccccccc--------ccccccccccccccchHHHHHHH
Confidence 36899999999999997 47999999998764321100 00000000 00000000000000011235566
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.. ...++...+...+.+++
T Consensus 87 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~ 147 (298)
T 2zv2_A 87 IAILKKLDH-----------------PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLI 147 (298)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHH
Confidence 666655422 11122333332 234589999999999988632 33455555555554444
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 148 ~~l~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 188 (298)
T 2zv2_A 148 KGIEYLHYQKIIHRDIKPSNLLVGED--GHIKIADFGVSNEFK 188 (298)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECS
T ss_pred HHHHHHHHCCeeccCCCHHHEEECCC--CCEEEecCCCccccc
Confidence 788999999999999999999865 899999999988764
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.3e-14 Score=158.63 Aligned_cols=151 Identities=19% Similarity=0.244 Sum_probs=98.0
Q ss_pred cccccccceeEEEEEEeCC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 123 ETPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~------G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
.+.||+|++|.||+|++++ ++.||||+.+.... ....++++++.+.. .
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~-------------------------~ 93 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAK-------------------------P 93 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCC-------------------------H
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhh-------------------------h
Confidence 3689999999999999854 58899999876532 22223332222110 0
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----c----CCCeEEecccCCCCCCCHHHHHhcCCCHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S----SETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~----~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (968)
.+..|...+..+ ....|++++. . ...+|||||+ |.+|.++.......++..
T Consensus 94 ~~~~e~~~~~~l--------------------~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~ 152 (364)
T 3op5_A 94 EQIQKWIRTRKL--------------------KYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRK 152 (364)
T ss_dssp HHHHHHHHHTTC--------------------SCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHH
T ss_pred HHHHHHHHHhhc--------------------cCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHH
Confidence 011121111111 1223444443 1 2258999999 989888754333456777
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+...+.+++ +..+|..|++|||+||.|||++.+.++.++|+|||+++.+..
T Consensus 153 ~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~ 206 (364)
T 3op5_A 153 TVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSG
T ss_pred HHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceeccc
Confidence 6666666655 888999999999999999999843348999999999977654
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-13 Score=160.35 Aligned_cols=141 Identities=21% Similarity=0.244 Sum_probs=100.1
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.++++.||||+.+++... . + +|.+|++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~-----~-----------------------~----------~~~~E~~ 235 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-----V-----------------------E----------AFLAEAN 235 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSBC-----H-----------------------H----------HHHHHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCcc-----H-----------------------H----------HHHHHHH
Confidence 689999999999999988999999998764311 0 0 2345655
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++ ..-+.+-.++.....+|||||++|.+|.+..... ....+...+...+.++. +.
T Consensus 236 ~l~~l~h-----------------~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~ 298 (454)
T 1qcf_A 236 VMKTLQH-----------------DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298 (454)
T ss_dssp HHTTCCC-----------------TTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCC-----------------CCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence 5544422 1112222233345678999999999998875422 22455555555554544 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 299 ~LH~~~ivHrDlkp~Nill~~~--~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 299 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIEDN 337 (454)
T ss_dssp HHHHTTCCCSSCSGGGEEECTT--CCEEECSTTGGGGBCCH
T ss_pred HHHhCCccCCCCCHHHEEECCC--CcEEEeeCCCceEcCCC
Confidence 8999999999999999999865 89999999999887643
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=148.57 Aligned_cols=139 Identities=21% Similarity=0.244 Sum_probs=98.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.++++.||||+.+.+.... + .+.+|++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------~----------~~~~E~~ 60 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------------------------D----------AFLAEAN 60 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH----------------------------H----------HHHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH----------------------------H----------HHHHHHH
Confidence 6899999999999999888899999886532110 0 1344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ..-+.+-.++.....++||||++|.+|.++.... ...++...+...+.+++ +.
T Consensus 61 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T 1qpc_A 61 LMKQLQH-----------------QRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123 (279)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------cCcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5555422 0112222233356678999999999988764322 12456666555555544 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 124 ~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 124 FIEERNYIHRDLRAANILVSDT--LSCKIADFGLARLIE 160 (279)
T ss_dssp HHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECS
T ss_pred HHHHCCeeccCCCHhhEEEcCC--CCEEECCCccccccc
Confidence 8999999999999999999865 899999999998764
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=152.58 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=91.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|.||+|+.++|+.||||+.+......- .. -.+.+|++
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~~------~~~~~E~~ 71 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEG-----------------------------IP------STAIREIS 71 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------C-----------------------------HH------HHHHHHHH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccch-----------------------------hh------HHHHHHHH
Confidence 67999999999999998899999998764321100 00 01234555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++.+ ..-+.+-.++. ....+|||||++| ++.+.......+++...+...+.+++ +.
T Consensus 72 ~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 133 (311)
T 3niz_A 72 LLKELHH-----------------PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133 (311)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC-----------------CCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 5554421 01122222222 3456899999997 44333221223355555555444444 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 134 ~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 134 HCHQHRILHRDLKPQNLLINSD--GALKLADFGLARAFG 170 (311)
T ss_dssp HHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEETT
T ss_pred HHHHCCcccCCCchHhEEECCC--CCEEEccCcCceecC
Confidence 8999999999999999999865 899999999998764
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.1e-13 Score=151.97 Aligned_cols=143 Identities=15% Similarity=0.247 Sum_probs=95.4
Q ss_pred ccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 122 VETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 122 d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
..+.||+|++|.||+|+.+ +|+.||||+........ +.+
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~ 54 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN----------------------------------------TQK 54 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHH----------------------------------------HHH
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhh----------------------------------------HHH
Confidence 3478999999999999984 79999999976432221 122
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
|.+.+.++... ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 55 e~~~l~~l~~h----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~ 117 (325)
T 3kn6_A 55 EITALKLCEGH----------------PNIVKLHEVFHDQLHTFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVS 117 (325)
T ss_dssp HHHHHHHTTTC----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC----------------CCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 33333333210 01122222332 455689999999999877643 223456665555555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|+||+||+++.++ +..++|+|||++......
T Consensus 118 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp HHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred HHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 7889999999999999999998541 137999999999866543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=153.59 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=93.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+ ....+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~--------------------------------~~~~~~~E~ 56 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD--------------------------------EVAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hh--------------------------------HHHHHHHHH
Confidence 67999999999999975 79999999986421100 00 000122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.+++ ++. +.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 57 ~~l~~l~------------------hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~a 117 (337)
T 1o6l_A 57 RVLQNTR------------------HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117 (337)
T ss_dssp HHHHSCC------------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 4433321 111 11222222 455689999999999876543 223455555554444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||.|||++.+ |.++|+|||+++..
T Consensus 118 L~~LH~~~ivHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 118 LEYLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEG 155 (337)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCS
T ss_pred HHHHHHCCeecCcCCHHHEEECCC--CCEEEeeccchhhc
Confidence 788999999999999999999865 89999999998754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.1e-13 Score=154.84 Aligned_cols=139 Identities=20% Similarity=0.256 Sum_probs=95.6
Q ss_pred ccccccceeEEEEEEeC--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
+.||.|++|+||+|+.. ++..||||+.+...... +.+
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~-------------------------------- 131 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLS-------------------------------- 131 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---HHH--------------------------------
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---HHH--------------------------------
Confidence 68999999999999852 45689999987543211 000
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh---------
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------- 262 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~--------- 262 (968)
++.+|.+.+.++.+ ++ .|++++. ....+|||||++|.+|.++.....
T Consensus 132 -~~~~E~~~l~~l~~-----------------hp--nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 191 (370)
T 2psq_A 132 -DLVSEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191 (370)
T ss_dssp -HHHHHHHHHHHSCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-------
T ss_pred -HHHHHHHHHHHhcC-----------------CC--CEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccc
Confidence 13445555555411 11 1333332 456799999999999987744221
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 ------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 192 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDIN 254 (370)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCSSCEETT
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC--CCEEEccccCCcccC
Confidence 1244555555555544 788999999999999999999865 899999999998664
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=9.4e-14 Score=158.76 Aligned_cols=143 Identities=22% Similarity=0.302 Sum_probs=97.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||+|+........ . ..+.+|+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~----~---------------------------------~~~~~E~ 99 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----K---------------------------------YTVKNEI 99 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----H---------------------------------HHHHHHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchhh----H---------------------------------HHHHHHH
Confidence 67999999999999974 79999999976432210 0 0123454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+........++...+...+.+++ +
T Consensus 100 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL 162 (387)
T 1kob_A 100 SIMNQLHH-----------------PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162 (387)
T ss_dssp HHHTTCCS-----------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 44433321 11122222332 4566899999999988765432223456666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.+.++.++|+|||++..+..
T Consensus 163 ~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred HHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 88999999999999999999854457899999999987754
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3e-13 Score=148.81 Aligned_cols=169 Identities=12% Similarity=0.112 Sum_probs=108.8
Q ss_pred HhhcCCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHH
Q 002092 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIV 169 (968)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~ 169 (968)
-+...+.+++.+++++... ..+...+...+.||+|++|.||+|+. +|+.||||+.+......-.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~-----f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~---------- 71 (307)
T 2nru_A 8 SDTRFHSFSFYELKNVTNN-----FDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE---------- 71 (307)
T ss_dssp ---CCEECCHHHHHHHTTT-----TCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTT----------
T ss_pred CCCCCCcccHHHHHHHHcc-----cccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchH----------
Confidence 3445677788887765422 22222233457899999999999986 7899999988654321000
Q ss_pred HHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEE
Q 002092 170 DWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLI 245 (968)
Q Consensus 170 ~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLV 245 (968)
...+ .+.+|++.+.++++ + .|++++. ....++|
T Consensus 72 -------------~~~~----------~~~~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 72 -------------ELKQ----------QFDQEIKVMAKCQH------------------E--NLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp -------------THHH----------HHHHHHHHHHHCCC------------------T--TBCCEEEEECSSSSCEEE
T ss_pred -------------HHHH----------HHHHHHHHHHhcCC------------------C--CeEEEEEEEecCCceEEE
Confidence 0000 13345555554421 1 1333332 4567999
Q ss_pred ecccCCCCCCCHHHHHh--cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 246 LEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 246 mE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
|||++|.+|.+...... ..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~ 184 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA--FTAKISDFGLARASE 184 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC--CcEEEeecccccccc
Confidence 99999999877643221 2355555555444443 788999999999999999999865 899999999987554
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-13 Score=148.72 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=90.6
Q ss_pred cccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.+.||+|++|.||+|+.. .+..||||+.+........ + .+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~------~~ 63 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR------------------------------E------KF 63 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHH------------------------------H------HH
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHH------------------------------H------HH
Confidence 368999999999999974 2557999987643221100 0 13
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.+|+..+.++.+ ..-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 64 ~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~ 126 (281)
T 1mp8_A 64 LQEALTMRQFDH-----------------PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126 (281)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CccceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 345555444321 011122222335667899999999999887543333466666665555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 127 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 127 TALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMED 168 (281)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECC---------
T ss_pred HHHHHHHhCCeecccccHHHEEECCC--CCEEECccccccccCc
Confidence 788999999999999999999966 8999999999987654
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=8e-14 Score=154.07 Aligned_cols=141 Identities=23% Similarity=0.368 Sum_probs=92.4
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|+||+|+. .+|+.||||+.+......- . ... .+.+|
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----~------------------------~~~------~~~~E 62 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP----S------------------------FYL------RFRRE 62 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSH----H------------------------HHH------HHHHH
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCH----H------------------------HHH------HHHHH
Confidence 36899999999999997 5899999999876432110 0 000 12223
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCC----eEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSET----VLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~----vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
++.+.++. ++ .|.+++. .... +|||||++|.+|.++... ...++...+...
T Consensus 63 ~~~l~~l~------------------hp--~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~ 121 (311)
T 3ork_A 63 AQNAAALN------------------HP--AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEV 121 (311)
T ss_dssp HTTCCCCC------------------CT--TBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH-HCSCCHHHHHHH
T ss_pred HHHHHcCC------------------CC--CcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh-cCCCCHHHHHHH
Confidence 22222111 11 2333332 2222 899999999999887542 234566665555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 122 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 122 IADACQALNFSHQNGIIHRDVKPANIMISAT--NAVKVMDFGIARAIAD 168 (311)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCGGGEEEETT--SCEEECCCSCC-----
T ss_pred HHHHHHHHHHHHHCCCCcCCCCHHHEEEcCC--CCEEEeeccCcccccc
Confidence 55544 788999999999999999999865 8999999999987654
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-13 Score=155.49 Aligned_cols=145 Identities=18% Similarity=0.186 Sum_probs=98.7
Q ss_pred ccccccceeEEEEEEe----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|+||+|+. .+|+.||||+.+......-. ...-.+.
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~---------------------------------~~~~~~~ 106 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA---------------------------------KTTEHTR 106 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE---------------------------------SSGGGCC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhh---------------------------------hHHHHHH
Confidence 6799999999999997 37999999997643210000 0011244
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|.+.+.++++. ..-+.+-..+. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 107 ~E~~~l~~l~~h----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 169 (355)
T 1vzo_A 107 TERQVLEHIRQS----------------PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIV 169 (355)
T ss_dssp CHHHHHHHHHTC----------------TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCC----------------CceeEEEEEEeeCceEEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 566666666421 00111112222 4566899999999998876532 23456655555554444
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.|||++.+ ++++|+|||+++.+..
T Consensus 170 ~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~DfG~a~~~~~ 211 (355)
T 1vzo_A 170 LALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVA 211 (355)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEESCSSEEEECCG
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CcEEEeeCCCCeeccc
Confidence 788999999999999999999865 8999999999987654
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.1e-13 Score=147.80 Aligned_cols=151 Identities=13% Similarity=0.048 Sum_probs=99.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.. +|+.||||+.++.....- +.. -.|.+|+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~----------------------------~~~------~~~~~e~ 82 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD----------------------------DVL------QETLSRT 82 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCH----------------------------HHH------HHHHHHH
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 68999999999999984 699999999876532110 000 0133444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++. ++ .|++++. .+..+|||||++|.+|.++.. .+.....+...+.+++
T Consensus 83 ~~l~~l~------------------hp--~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~---~~~~~~~~~~i~~ql~ 139 (286)
T 3uqc_A 83 LRLSRID------------------KP--GVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD---TSPSPVGAIRAMQSLA 139 (286)
T ss_dssp HHHHTCC------------------CT--TBCCEEEEEEETTEEEEEEECCCEEEHHHHHT---TCCCHHHHHHHHHHHH
T ss_pred HHHhcCC------------------CC--CcceeeEEEEECCcEEEEEEecCCCCHHHHHh---cCCChHHHHHHHHHHH
Confidence 4443321 11 1333332 456789999999999887642 3445555555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH-HHHHHHHHHHHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS-MKQALAKMFFAA 333 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~-~r~~~~~l~~a~ 333 (968)
+..+|..|++|+|+||+|||++.+ |.++|.++|.+...+.. +-..+.-+++.+
T Consensus 140 ~aL~~lH~~givH~Dikp~NIll~~~--g~~kl~~~~~~~~~~~~~Di~slG~il~el 195 (286)
T 3uqc_A 140 AAADAAHRAGVALSIDHPSRVRVSID--GDVVLAYPATMPDANPQDDIRGIGASLYAL 195 (286)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEEETT--SCEEECSCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCccCCCCcccEEEcCC--CCEEEEeccccCCCCchhHHHHHHHHHHHH
Confidence 788999999999999999999965 88999988877655433 333343344333
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-13 Score=151.88 Aligned_cols=140 Identities=20% Similarity=0.257 Sum_probs=93.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ . .+ .+.+|.
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-~-----------------------~~----------~~~~E~ 57 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-Q-----------------------VE----------HTNDER 57 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTT-C-----------------------HH----------HHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhh-H-----------------------HH----------HHHHHH
Confidence 57999999999999984 7999999998643211000 0 00 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+..+. ++ .|.+++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 58 ~~l~~l~------------------hp--~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 116 (318)
T 1fot_A 58 LMLSIVT------------------HP--FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVC 116 (318)
T ss_dssp HHHHSCC------------------BT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHH
T ss_pred HHHhhCC------------------CC--CCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3333221 11 123333 2 4556899999999998876432 23355555444444433
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ |.++|+|||+++.+..
T Consensus 117 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 117 LALEYLHSKDIIYRDLKPENILLDKN--GHIKITDFGFAKYVPD 158 (318)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECTT--SCEEECCCSSCEECSS
T ss_pred HHHHHHHHCCccccCCChheEEEcCC--CCEEEeecCcceecCC
Confidence 788999999999999999999865 8999999999987643
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.3e-13 Score=153.84 Aligned_cols=135 Identities=16% Similarity=0.229 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+..-. .-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~E~ 55 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---------------------------------------APQLHLEY 55 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---------------------------------------SCCHHHHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc---------------------------------------hHHHHHHH
Confidence 6799999999999997 5899999998653211 11345566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ + -.|++++ . ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~-----------------h--~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (330)
T 2izr_A 56 RFYKQLGS-----------------G--DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLI 115 (330)
T ss_dssp HHHHHHCS-----------------C--TTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhhC-----------------C--CCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 66666521 1 1133333 2 34568999999 8888887544334566666666666555
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCc-----eEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHR-----PILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~-----i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.|||++.+ +. ++|+|||++..+.
T Consensus 116 ~~l~~LH~~~iiHrDlkp~Nill~~~--~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 116 SRMEYVHSKNLIYRDVKPENFLIGRP--GNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECCG--GGTCTTSEEECCCTTCEESB
T ss_pred HHHHHHHhCCeeccCCCHHHeeeccC--CCCCCceEEEEEcccceeee
Confidence 888999999999999999999865 55 9999999998653
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-13 Score=149.27 Aligned_cols=141 Identities=22% Similarity=0.231 Sum_probs=95.8
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+. .+|+.||||+.++...... . -++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------~----------~~~ 70 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--------------------------I----------ADL 70 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CC--------------------------H----------HHH
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchh--------------------------H----------HHH
Confidence 6799999999999983 4799999999875422110 0 013
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|++.+.++++ ..-+.+-.++. . ...++||||++|.+|.++.......++...+...+.
T Consensus 71 ~~E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 133 (302)
T 4e5w_A 71 KKEIEILRNLYH-----------------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV 133 (302)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHH
Confidence 345444444321 01122222222 2 345899999999999887644444566666666555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 134 ~i~~~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 134 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 177 (302)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECC
T ss_pred HHHHHHHHhhcCCcccCCCchheEEEcCC--CCEEECccccccccc
Confidence 554 888999999999999999999876 899999999987654
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-13 Score=146.82 Aligned_cols=137 Identities=18% Similarity=0.187 Sum_probs=99.0
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+..+++.||||+.++..... -++.+|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~~ 55 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 55 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--------------------------------------HHHHHHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999889999999987543210 01334544
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ + .|++++. ....++||||++|.+|.+.........+...+...+.+++
T Consensus 56 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (267)
T 3t9t_A 56 VMMKLSH------------------P--KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115 (267)
T ss_dssp HHHTCCC------------------T--TBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--CEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHH
Confidence 4444321 1 1233332 4567899999999999887543333456666665555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 116 ~l~~lH~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 116 GMAYLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLD 156 (267)
T ss_dssp HHHHHHHTTCCCSSCCGGGEEECGG--GCEEECCTTGGGGBCC
T ss_pred HHHHHHhCCcccCCCchheEEECCC--CCEEEccccccccccc
Confidence 788999999999999999999865 8899999999987754
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-13 Score=149.34 Aligned_cols=138 Identities=19% Similarity=0.308 Sum_probs=96.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+.... .-.+.+|.
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~e~ 56 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---------------------------------------APQLRDEY 56 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---------------------------------------SCCHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---------------------------------------cHHHHHHH
Confidence 5799999999999996 5899999998753211 11234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+. ..+|.++. ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 57 ~~~~~l~~~-------------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~ 116 (298)
T 1csn_A 57 RTYKLLAGC-------------------TGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQML 116 (298)
T ss_dssp HHHHHTTTC-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcC-------------------CCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 555554321 11333332 45668999999 8898887543333466666666655555
Q ss_pred --HHHHHhcCccccCCCCCceEEecCC---CCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.++ .+.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 117 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 7889999999999999999998541 12399999999986643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-13 Score=151.25 Aligned_cols=139 Identities=18% Similarity=0.166 Sum_probs=94.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+........ .+-.+.+|+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 56 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 56 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc------------------------------------hHHHHHHHH
Confidence 67999999999999975 89999999975432110 011244555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 57 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL 118 (323)
T 3tki_A 57 CINKMLNH-----------------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGV 118 (323)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 01111222222 455689999999999987643 122355555555554444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 119 ~~LH~~givH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 119 VYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVF 155 (323)
T ss_dssp HHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEEC
T ss_pred HHHHHCCccccccchHHEEEeCC--CCEEEEEeecccee
Confidence 88999999999999999999865 89999999999765
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.42 E-value=2.4e-13 Score=158.68 Aligned_cols=140 Identities=18% Similarity=0.190 Sum_probs=98.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.+++..||||+.+++.... -+|.+|++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 231 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 231 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999888899999987642110 02455666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++. .-+.+-.++.....+|||||++|.+|.++..... ..++...+...+.+++ +.
T Consensus 232 ~l~~l~hp-----------------~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 294 (452)
T 1fmk_A 232 VMKKLRHE-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294 (452)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC-----------------CEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 66665321 1112222222456789999999999988754322 3356666665555554 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 295 ~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 295 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 332 (452)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCCCTTC----
T ss_pred HHHhCCeeCCCCChhhEEECCC--CCEEECCCccceecCC
Confidence 8999999999999999999865 8999999999987654
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-13 Score=152.76 Aligned_cols=147 Identities=11% Similarity=0.135 Sum_probs=99.9
Q ss_pred ccccccceeEEEEEEeC---------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhh
Q 002092 124 TPLATASIAQVHRATLV---------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~---------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.. +.+..++++++.+
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l-------------------------- 99 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRA-------------------------- 99 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHH--------------------------
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHh--------------------------
Confidence 68999999999999985 3899999998754 2333344333322
Q ss_pred ccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCCCCCHHHHH-hcCCCHH
Q 002092 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLE-AFGVNKQ 268 (968)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~ 268 (968)
+- .|+.++...+. ..+...+|+++. ....+|||||+ |.+|.++.... ...++..
T Consensus 100 --~h----~niv~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~ 159 (352)
T 2jii_A 100 --AK----PLQVNKWKKLY-------------STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSER 159 (352)
T ss_dssp --CC----HHHHHHHHHHT-------------TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHH
T ss_pred --cc----cchhhhhhhhc-------------cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHH
Confidence 11 13333333332 122344555543 34458999999 99998875432 2456776
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCC--ceEEEecccccccCH
Q 002092 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSS 320 (968)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~~l~~ 320 (968)
.+...+.+++ +..+|..|++|+|+||.||+++.+ + +++|+|||++..+..
T Consensus 160 ~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~--~~~~~kl~Dfg~a~~~~~ 213 (352)
T 2jii_A 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE--DQSQVTLAGYGFAFRYCP 213 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT--EEEEEEECCGGGCBCSSG
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC--CCceEEEecCcceeeccC
Confidence 6666666655 788999999999999999999965 5 899999999987654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.6e-13 Score=154.24 Aligned_cols=140 Identities=16% Similarity=0.111 Sum_probs=93.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+......-. . .-.+..|.
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~--------------------~--------------~~~~~~E~ 103 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE--------------------D--------------IDWVQTEK 103 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------------------------------------CCHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHH--------------------H--------------HHHHHHHH
Confidence 68999999999999985 7899999998743211000 0 00123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.+ ++. +.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 104 ~il~~~~~-----------------hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~a 165 (396)
T 4dc2_A 104 HVFEQASN-----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 165 (396)
T ss_dssp HHHHHHTT-----------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 44443321 111 12222222 455689999999999876543 233456555555554444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.
T Consensus 166 L~~LH~~givHrDLKp~NILl~~~--g~ikL~DFGla~~ 202 (396)
T 4dc2_A 166 LNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKE 202 (396)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBC
T ss_pred HHHHHHCCEEeccCCHHHEEECCC--CCEEEeecceeee
Confidence 788999999999999999999865 8999999999875
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.8e-13 Score=149.82 Aligned_cols=144 Identities=18% Similarity=0.146 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ +..+..|.
T Consensus 63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~e~ 107 (311)
T 3p1a_A 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-----------------------------------RARKLAEV 107 (311)
T ss_dssp EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-----------------------------------HHHHHHHH
T ss_pred heeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-----------------------------------HHHHHHHH
Confidence 57999999999999985 8999999987643321100 00011222
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.+. ... ..-+.+-..+. ....+|||||+.| +|.+........++...+...+.+++ +
T Consensus 108 ~~~~~~---~~h-------------~~iv~l~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL 170 (311)
T 3p1a_A 108 GSHEKV---GQH-------------PCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLAL 170 (311)
T ss_dssp HHHHHH---CCC-------------TTBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHh---cCC-------------CcEEEEEEEEEeCCEEEEEEeccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 222222 110 01122222222 4566899999954 66554333333466666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|+|+||+|||++.+ +.++|+|||++..+...
T Consensus 171 ~~LH~~~ivH~Dikp~NIll~~~--~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 171 AHLHSQGLVHLDVKPANIFLGPR--GRCKLGDFGLLVELGTA 210 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECGG--GCEEECCCTTCEECC--
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEccceeeeecccC
Confidence 88999999999999999999865 89999999999877653
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-13 Score=153.21 Aligned_cols=140 Identities=14% Similarity=0.152 Sum_probs=94.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.++...... . ..-.+.+|.
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~------------------------------~~~~~~~E~ 92 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL----K------------------------------QIEHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----T------------------------------CHHHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccH----H------------------------------HHHHHHHHH
Confidence 68999999999999975 799999999764211000 0 000122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++. ++ .|++++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 93 ~~l~~l~------------------hp--~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 151 (350)
T 1rdq_E 93 RILQAVN------------------FP--FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIV 151 (350)
T ss_dssp HHHTTCC------------------CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CC--CCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3333221 11 122333 2 4556899999999998776432 23456555555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 152 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 152 LTFEYLHSLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRVKG 193 (350)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHHHCCcccccCccceEEECCC--CCEEEcccccceeccC
Confidence 788999999999999999999865 8999999999987643
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.4e-13 Score=143.78 Aligned_cols=143 Identities=17% Similarity=0.098 Sum_probs=98.6
Q ss_pred cccccccceeEEEEEEeCC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 123 ETPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~----G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.+.||+|++|+||+|+..+ ++.||||+.++...... .-.+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 60 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN------------------------------------KEKF 60 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHH------------------------------------HHHH
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchH------------------------------------HHHH
Confidence 3689999999999998642 34699999875422110 0123
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.+|++.+.++.+. .-+.+-.++.....++||||++|.+|.+.........+...+...+.+++
T Consensus 61 ~~E~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~ 123 (281)
T 3cc6_A 61 MSEAVIMKNLDHP-----------------HIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC 123 (281)
T ss_dssp HHHHHHHHHHCCT-----------------TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-----------------CcceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHH
Confidence 4566666665321 11222223335667899999999999887544333466666655555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 124 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 124 KAMAYLESINCVHRDIAVRNILVASP--ECVKLGDFGLSRYIED 165 (281)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEEEET--TEEEECCCCGGGCC--
T ss_pred HHHHHHHHCCcccCCCccceEEECCC--CcEEeCccCCCccccc
Confidence 788999999999999999999976 8999999999987754
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4e-13 Score=151.14 Aligned_cols=141 Identities=15% Similarity=0.149 Sum_probs=93.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... ..+. . .+..|.
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~-----------------------~----------~~~~E~ 68 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDV-----------------------E----------CTMVEK 68 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCH-----------------------H----------HHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhH-----------------------H----------HHHHHH
Confidence 68999999999999985 79999999986431100 0000 0 012333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+..+. . ++. +.+-..+. ....+|||||++|++|.+.... ...++...+...+.+++
T Consensus 69 ~il~~~~---~--------------hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~a 130 (345)
T 1xjd_A 69 RVLSLAW---E--------------HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILG 130 (345)
T ss_dssp HHHHHHT---T--------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcC---C--------------CCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 3333321 1 111 12222222 4556899999999998776432 23456555555444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 131 L~~LH~~~ivHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 131 LQFLHSKGIVYRDLKLDNILLDKD--GHIKIADFGMCKEN 168 (345)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCC
T ss_pred HHHHHHCCeEeCCCChhhEEECCC--CCEEEeEChhhhhc
Confidence 788999999999999999999865 89999999998764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.4e-13 Score=149.19 Aligned_cols=151 Identities=17% Similarity=0.197 Sum_probs=95.0
Q ss_pred ccccccccc-cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d-~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
++-.+..+. .+.||+|++|.||+|+. +|+.||||+.+......- . .+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~--~-----------------------~~------ 79 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAE--R-----------------------VN------ 79 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHH--H-----------------------HH------
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHH--H-----------------------HH------
Confidence 333344444 46899999999999987 689999999764321100 0 00
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--cCCCHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQK 269 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~ 269 (968)
.+.+|++.+.++++ ..-+.+-.++. ....++||||++|.+|.++..... ..++...
T Consensus 80 ----~~~~E~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 138 (309)
T 3p86_A 80 ----EFLREVAIMKRLRH-----------------PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138 (309)
T ss_dssp ----HHHHHHHHHHHCCC-----------------TTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHH
T ss_pred ----HHHHHHHHHHhCCC-----------------CCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHH
Confidence 13456666555432 00111212222 455789999999999877643111 1145555
Q ss_pred HHHHHHHHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 270 VVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 270 l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+...+.+++ +..+|..| ++|+|+||+||+++.+ +.++|+|||+++...
T Consensus 139 ~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK--YTVKVCDFGLSRLKA 190 (309)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTT--CCEEECCCC------
T ss_pred HHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCC--CcEEECCCCCCcccc
Confidence 555444444 78899999 9999999999999865 899999999987543
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.41 E-value=3e-13 Score=161.25 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=102.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.++++.||||+.+++.... -+|.+|++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 314 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 314 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999888899999987643110 02455666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++. .-+.+-.++.....+|||||++|.+|.++..... ..++...+...+.+++ +.
T Consensus 315 ~l~~l~hp-----------------niv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 377 (535)
T 2h8h_A 315 VMKKLRHE-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377 (535)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC-----------------CEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 66665321 1122222233456789999999999988754322 3356666666555554 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|..|++||||||.||||+.+ +.++|+|||+++.+...
T Consensus 378 ~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 378 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDN 416 (535)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCTTSTTTCCCH
T ss_pred HHHhCCeeCCCCCHhhEEEcCC--CcEEEcccccceecCCC
Confidence 8999999999999999999865 89999999999887643
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=5.1e-13 Score=150.24 Aligned_cols=141 Identities=18% Similarity=0.140 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- .+. . .+.+|.
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------~------~~~~E~ 60 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDI---------------------------D------WVQTEK 60 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-HHH---------------------------H------HHHHHH
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-HHH---------------------------H------HHHHHH
Confidence 67999999999999985 789999999864321100 000 0 012333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.+ ++. +.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 61 ~~l~~~~~-----------------hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~a 122 (345)
T 3a8x_A 61 HVFEQASN-----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 122 (345)
T ss_dssp HHHHHTTT-----------------CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33333211 111 12222222 455689999999999876643 223455555555444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 123 L~~LH~~~ivHrDlkp~NIll~~~--g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 123 LNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEG 160 (345)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCGGGCBCS
T ss_pred HHHHHHCCceecCCCHHHEEECCC--CCEEEEeccccccc
Confidence 788999999999999999999865 89999999998753
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=146.90 Aligned_cols=141 Identities=21% Similarity=0.237 Sum_probs=97.6
Q ss_pred ccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||+|++|+||+|+.+ +|+.||||+.++...... .+ .+.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~---~~---------------------------------~~~~ 59 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD---TE---------------------------------EMMR 59 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHH---HH---------------------------------HHHH
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhH---HH---------------------------------HHHH
Confidence 48999999999999863 688999999876532110 00 1334
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
|++.+.++.+ ..-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 60 E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~ 122 (287)
T 1u59_A 60 EAQIMHQLDN-----------------PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122 (287)
T ss_dssp HHHHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-----------------CCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHH
Confidence 5555554421 011222222235567899999999988776432233456666655555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 123 l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 123 MKYLEEKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALG 161 (287)
T ss_dssp HHHHHHTTEECCCCSGGGEEEEET--TEEEECCCTTCEECT
T ss_pred HHHHHHCCEeeCCCchheEEEcCC--CCEEECcccceeeec
Confidence 788999999999999999999966 899999999988764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.3e-13 Score=152.69 Aligned_cols=139 Identities=18% Similarity=0.157 Sum_probs=94.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.+.... + .+.+|+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------~----------~~~~E~ 67 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----------------------------E----------NVQREI 67 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----------------------------H----------HHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----------------------------H----------HHHHHH
Confidence 67999999999999985 89999999886432100 0 123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++++ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 68 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 68 INHRSLRH-----------------PNIVRFKEVILTPTHLAIIMEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 44444321 11122223333 455689999999999877643 233466666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||.||+++.++.++++|+|||+++..
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 889999999999999999998664456999999998743
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=149.93 Aligned_cols=140 Identities=21% Similarity=0.257 Sum_probs=96.5
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+. .+|+.||||+.++...... + .+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------~----------~~ 89 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---------------------------R----------DF 89 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHH---------------------------H----------HH
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHH---------------------------H----------HH
Confidence 5799999999999984 4799999999876422110 0 13
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|++.+.++++ ..-+.+-.++. ....++||||++|.+|.++.......++...+...+.
T Consensus 90 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 152 (326)
T 2w1i_A 90 EREIEILKSLQH-----------------DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152 (326)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHH
Confidence 345555444321 01122222222 1256899999999999887543333466666665555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 153 qi~~aL~~LH~~~ivH~dikp~NIli~~~--~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 153 QICKGMEYLGTKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLP 196 (326)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECC
T ss_pred HHHHHHHHHHhCCEeccCCCcceEEEcCC--CcEEEecCcchhhcc
Confidence 554 788999999999999999999966 899999999988664
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.1e-13 Score=150.43 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=99.3
Q ss_pred CCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHH
Q 002092 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (968)
Q Consensus 112 ~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (968)
....+.|... +.||+|++|.||+|+. .+|+.||||+.+......- +..+
T Consensus 50 ~~~~~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----------------------------~~~~ 99 (348)
T 1u5q_A 50 DDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN----------------------------EKWQ 99 (348)
T ss_dssp SCHHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHH----------------------------HHHH
T ss_pred cchhhheeee--eEEccCCCEEEEEEEEccCCeEEEEEEEccccccch----------------------------HHHH
Confidence 3444445433 4699999999999997 5899999998864322110 0000
Q ss_pred hhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHH
Q 002092 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (968)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (968)
++.+|++.+.++++ ..-+.+-.++. ....+|||||++| ++.+........++...
T Consensus 100 ------~~~~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~ 155 (348)
T 1u5q_A 100 ------DIIKEVRFLQKLRH-----------------PNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE 155 (348)
T ss_dssp ------HHHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHH
T ss_pred ------HHHHHHHHHHhCCC-----------------CCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHH
Confidence 13345555555422 01122222232 4566899999987 44444333334566665
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 156 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMA 205 (348)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSS
T ss_pred HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEeeccCceecC
Confidence 555555544 788999999999999999999965 899999999987664
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-13 Score=150.05 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=92.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|+||+|+..+|+.||||+.+......- ... .+.+|.+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~-------------------------~~~----------~~~~E~~ 52 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG-------------------------IPS----------TTIREIS 52 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGC-------------------------CCH----------HHHHHHH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccc-------------------------cch----------hHHHHHH
Confidence 57999999999999998899999998764322100 000 1223433
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++ ..-+.+-.++. ....++||||++| +|.+.......+++...+...+.+++ +.
T Consensus 53 ~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 114 (288)
T 1ob3_A 53 ILKELKH-----------------SNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114 (288)
T ss_dssp GGGGCCC-----------------TTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-----------------CCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 3333211 11122222222 4566899999997 55554332223455555555444444 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 115 ~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 115 YCHDRRVLHRDLKPQNLLINRE--GELKIADFGLARAFG 151 (288)
T ss_dssp HHHHTTCCCSCCCGGGEEECTT--SCEEECCTTHHHHHC
T ss_pred HHHHCCeecCCCCHHHEEEcCC--CCEEEeECccccccC
Confidence 8999999999999999999865 899999999987654
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-13 Score=151.12 Aligned_cols=138 Identities=17% Similarity=0.167 Sum_probs=95.5
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+.+ +++.||||+.++....... -.
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 96 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 96 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHH------------------------------------HH
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHH------------------------------------HH
Confidence 57999999999999974 3589999998754321110 01
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-----------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (968)
|.+|++.+.++++ + .|++++. ....+|||||++|.+|.++.....
T Consensus 97 ~~~E~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 156 (343)
T 1luf_A 97 FQREAALMAEFDN------------------P--NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156 (343)
T ss_dssp HHHHHHHHHTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------
T ss_pred HHHHHHHHHhCCC------------------C--CEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccccc
Confidence 3445555554421 1 1333332 456789999999999987743210
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 ------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 225 (343)
T 1luf_A 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIY 225 (343)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHT
T ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC--CeEEEeecCCCcccc
Confidence 2344555554444444 788999999999999999999865 899999999987654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-13 Score=153.97 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ .+ .+..|.
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~-----------------------~~----------~~~~E~ 71 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-DD-----------------------VE----------CTMVEK 71 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHT-TC-----------------------HH----------HHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcc-hH-----------------------HH----------HHHHHH
Confidence 68999999999999985 689999999864311000 00 00 012232
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+. .++ .|++++ . ....+|||||++|++|.+.... ...++...+...+.+++
T Consensus 72 ~~l~~~~-----------------~hp--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 131 (353)
T 2i0e_A 72 RVLALPG-----------------KPP--FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIA 131 (353)
T ss_dssp HHHTCTT-----------------CCT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcC-----------------CCC--EEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 2222110 111 233333 2 3556899999999998776432 23456555555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 132 ~aL~~LH~~givHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 132 IGLFFLQSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 171 (353)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCC
T ss_pred HHHHHHHHCCEEeccCCHHHEEEcCC--CcEEEEeCCccccc
Confidence 788999999999999999999865 89999999998764
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.3e-13 Score=157.60 Aligned_cols=140 Identities=19% Similarity=0.289 Sum_probs=97.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+...... .-++..|.
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~E~ 53 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------------------------------HPQLLYES 53 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---------------------------------------SCCHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---------------------------------------cHHHHHHH
Confidence 5799999999999997 5799999998653211 11234555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+..+.+. ..+..-..+. ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 54 ~il~~L~~~-----------------~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~a 115 (483)
T 3sv0_A 54 KIYRILQGG-----------------TGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 115 (483)
T ss_dssp HHHHHTTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 555554331 1111112222 45568999999 8888887543344567776666666655
Q ss_pred HHHHHhcCccccCCCCCceEEec-CCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..||+||||||.||||+. +.++.++|+|||+++.+..
T Consensus 116 L~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp HHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred HHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 88999999999999999999941 1238899999999986643
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=149.90 Aligned_cols=140 Identities=18% Similarity=0.189 Sum_probs=97.7
Q ss_pred ccccccceeEEEEEEe-----CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-----~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||.|++|.||+|+. .+|+.||||+.+..-.... -.+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~ 71 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-------------------------------------RDF 71 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHH-------------------------------------HHH
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHH-------------------------------------HHH
Confidence 6899999999999984 4789999999875422110 013
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.......++...+...+.
T Consensus 72 ~~E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 134 (327)
T 3lxl_A 72 QREIQILKALHS-----------------DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 134 (327)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhcCC-----------------CceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHH
Confidence 345555444321 01111112222 2335799999999999887654344567666666555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 135 qi~~al~~lH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 135 QICKGMEYLGSRRCVHRDLAARNILVESE--AHVKIADFGLAKLLP 178 (327)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCGGGCEECC
T ss_pred HHHHHHHHHHhCCccCCCCChhhEEECCC--CCEEEcccccceecc
Confidence 554 788999999999999999999876 899999999998654
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-13 Score=153.13 Aligned_cols=141 Identities=18% Similarity=0.233 Sum_probs=93.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.++|+.||||+.+...... .+..+.+|++
T Consensus 36 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~e~~ 79 (326)
T 3uim_A 36 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG------------------------------------GELQFQTEVE 79 (326)
T ss_dssp TEEECCSSSEEEEECCSSSCCEEEEECCC-----------------------------------------CCCHHHHHHH
T ss_pred eeEecCCCcEEEEEEecCCCEEEEEEeccccCch------------------------------------HHHHHHHHHH
Confidence 6899999999999998899999999876532110 1112344444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+ ..-+.+-.++. .+..++||||++|.+|.+...... ..++...+...+.+++
T Consensus 80 ~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~ 142 (326)
T 3uim_A 80 MISMAVH-----------------RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR 142 (326)
T ss_dssp GGGTCCC-----------------TTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHhccC-----------------CCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHH
Confidence 4333211 01111222222 466789999999999877643211 1244445444444443
Q ss_pred -HHHHHhc---CccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVD---GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~---G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|.. |++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 143 ~l~~lH~~~~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 143 GLAYLHDHCDPKIIHRDVKAANILLDEE--FEAVVGDFGLAKLMD 185 (326)
T ss_dssp HHHHHHHSSSSCEECCCCSGGGEEECTT--CCEEECCCSSCEECC
T ss_pred HHHHHHhCCCCCeEeCCCchhhEEECCC--CCEEeccCccccccC
Confidence 7889998 99999999999999865 899999999997653
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=9.3e-13 Score=157.07 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+...... -..+..+.+|.
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----------------------------------~~~~~~~~~E~ 235 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 235 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------------------TTCHHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----------------------------------hHHHHHHHHHH
Confidence 67999999999999985 89999999875321000 00111234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+. .-+.+-..+. ....+|||||++|++|.+..... ..+++...+...+.+++
T Consensus 236 ~iL~~l~hp-----------------~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~a 298 (576)
T 2acx_A 236 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298 (576)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC-----------------CEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 555544220 1122222222 45568999999999987653211 12256655555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 299 L~yLH~~gIvHrDLKPeNILld~~--g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 299 LEDLHRERIVYRDLKPENILLDDH--GHIRISDLGLAVHVPE 338 (576)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHCCEeccCCchheEEEeCC--CCeEEEecccceeccc
Confidence 788999999999999999999865 8999999999987754
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=8e-13 Score=150.67 Aligned_cols=142 Identities=18% Similarity=0.215 Sum_probs=96.6
Q ss_pred ccccccceeEEEEEEeC--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
+.||+|++|.||+|+.. +++.||||+.+....... .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~--------------------------------- 118 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD---L--------------------------------- 118 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHH---H---------------------------------
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHH---H---------------------------------
Confidence 68999999999999862 346899999875432110 0
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh------------
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------ 262 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------ 262 (968)
-++.+|++.+.++.+. ..-+.+-..+. ....+|||||++|.+|.++.....
T Consensus 119 ~~~~~E~~~l~~l~~h----------------pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~ 182 (382)
T 3tt0_A 119 SDLISEMEMMKMIGKH----------------KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 182 (382)
T ss_dssp HHHHHHHHHHHHHCCC----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCS
T ss_pred HHHHHHHHHHHHhcCC----------------chhhhheeeeccCCceEEEEEecCCCcHHHHHHHhccccccccccccc
Confidence 0133455555555210 01122222222 456789999999999987754321
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 ---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 183 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 183 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 242 (382)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECSCSCCCCSS
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC--CcEEEcccCcccccc
Confidence 1255666665555554 788999999999999999999865 899999999987654
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-13 Score=145.31 Aligned_cols=138 Identities=20% Similarity=0.311 Sum_probs=96.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+...... .-.+.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~e~ 55 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---------------------------------------HPQLHIES 55 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC------------------------------------------CCCHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeeccccc---------------------------------------chHHHHHH
Confidence 5799999999999997 5899999998543211 01244565
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee-e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+. ..+..-..+ . ....++||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~ 117 (296)
T 4hgt_A 56 KIYKMMQGG-----------------VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR 117 (296)
T ss_dssp HHHHHHTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 565555431 111111122 1 44568999999 8888877543344566666666555554
Q ss_pred HHHHHhcCccccCCCCCceEE---ecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLV---SKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv---~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||++ +.+ +.++|+|||++..+..
T Consensus 118 l~~LH~~~ivH~Dlkp~NIl~~~~~~~--~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 118 IEYIHSKNFIHRDVKPDNFLMGLGKKG--NLVYIIDFGLAKKYRD 160 (296)
T ss_dssp HHHHHHTTEECSCCSGGGEEECCGGGT--TCEEECCCTTCEECBC
T ss_pred HHHHHHCCeecCCCCHHHeeeeccCCC--CeEEEecCccceeccC
Confidence 788999999999999999999 443 8899999999986643
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4e-13 Score=147.62 Aligned_cols=147 Identities=15% Similarity=0.208 Sum_probs=100.9
Q ss_pred CCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHH
Q 002092 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (968)
Q Consensus 112 ~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (968)
...++.|... +.||+|++|+||+|+. .+|+.||||+.+....... .+
T Consensus 18 ~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------~~---- 65 (303)
T 3a7i_A 18 ADPEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE--------------------------IE---- 65 (303)
T ss_dssp ECGGGTEEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTT--------------------------HH----
T ss_pred CChHHHHHHh--hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHH--------------------------HH----
Confidence 3445555443 4799999999999997 5799999999865422110 00
Q ss_pred hhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCC
Q 002092 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVN 266 (968)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~ 266 (968)
++.+|+..+.++.+ + .|++++ . ....++||||++|.+|.++. ....++
T Consensus 66 ------~~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~ 117 (303)
T 3a7i_A 66 ------DIQQEITVLSQCDS------------------P--YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLD 117 (303)
T ss_dssp ------HHHHHHHHHHHCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTEEHHHHH--TTSCCC
T ss_pred ------HHHHHHHHHHhCCC------------------C--CEeEEEEEEecCCeEEEEEEeCCCCcHHHHH--hcCCCC
Confidence 12344444443321 1 122332 2 45568999999999887763 334566
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 118 ~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 171 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECBT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCC--CCEEEeecccceecCc
Confidence 666655555544 788999999999999999999865 8999999999877643
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.9e-13 Score=146.91 Aligned_cols=141 Identities=14% Similarity=0.113 Sum_probs=91.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- ... .+.+|+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------~~~----------~~~~E~ 52 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-------------------------VPS----------SALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT-------------------------HHH----------HHHHHH
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCC-------------------------cch----------HHHHHH
Confidence 57999999999999984 799999999864422110 000 122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....+|||||++|..+..+ ......++...+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~~~~ql~~~l 114 (292)
T 3o0g_A 53 CLLKELKH-----------------KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGL 114 (292)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------------CCEeeEEeEEEeCCEEEEEEecCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHH
Confidence 44333321 11122223332 4556899999997433222 11223455555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~~lH~~~ivH~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 115 GFCHSRNVLHRDLKPQNLLINRN--GELKLANFGLARAFG 152 (292)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC
T ss_pred HHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecC
Confidence 88999999999999999999865 899999999997654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=9.9e-13 Score=156.70 Aligned_cols=144 Identities=15% Similarity=0.208 Sum_probs=93.5
Q ss_pred cccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 121 ~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+..+.||+|++|+||+|+ ..++.|++|+..+.....-..+ ++. ..-.+.+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~------------------------~~~-----~~~~~~~ 388 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLD------------------------ENI-----RKSRTAR 388 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHH------------------------HHH-----HHHHHHH
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhh------------------------hHH-----HHHHHHH
Confidence 445789999999999995 4689999998765322110000 000 0113566
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
|++.+.++++ +.+..|..+. ....+|||||++|.+|.++... ...++..+++.
T Consensus 389 E~~il~~l~h------------------~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~------~~~i~~qi~~a- 443 (540)
T 3en9_A 389 EARYLALVKD------------------FGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED------NLDIAYKIGEI- 443 (540)
T ss_dssp HHHHHHHGGG------------------GTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT------CTHHHHHHHHH-
T ss_pred HHHHHHhcCC------------------CCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH------HHHHHHHHHHH-
Confidence 7777777643 2344456654 5677999999999988776331 22444445444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (968)
+..+|..|++|||+||+|||++. +++|+|||+++.++....
T Consensus 444 L~~LH~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 444 VGKLHKNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp HHHHHHTTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHH
T ss_pred HHHHHHCcCccCCCCHHHEEECC----eEEEEECccCEECCCccc
Confidence 77899999999999999999973 899999999999876543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.3e-13 Score=150.78 Aligned_cols=141 Identities=20% Similarity=0.302 Sum_probs=88.9
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.++||+|++|+||+|+. .+|+.||||+.+....... ... .+.+|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~~------~~~~E 74 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-----------------------------FAK------RAYRE 74 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHH-----------------------------HHH------HHHHH
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHH-----------------------------HHH------HHHHH
Confidence 36899999999999997 5899999998754321110 000 12345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-------CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
.+.+.++++. .-+.+-.++.. +..+|||||+ |.+|.++. ....++...+...+
T Consensus 75 ~~~l~~l~hp-----------------nIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~ 134 (367)
T 1cm8_A 75 LRLLKHMRHE-----------------NVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM--KHEKLGEDRIQFLV 134 (367)
T ss_dssp HHHHHHCCBT-----------------TBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHH--HHCCCCHHHHHHHH
T ss_pred HHHHHhCCCc-----------------CCCCceeeEecCCccccCceEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHH
Confidence 5555544320 11222223321 3458999999 77777663 33456665555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++..+.
T Consensus 135 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 135 YQMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQADS 180 (367)
T ss_dssp HHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHCCccccCcCHHHEEEcCC--CCEEEEeeeccccccc
Confidence 5544 788999999999999999999865 8999999999987643
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.38 E-value=6e-13 Score=145.35 Aligned_cols=140 Identities=19% Similarity=0.289 Sum_probs=96.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+....... -++.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---------------------------------------CHHHHHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---------------------------------------hHHHHHH
Confidence 6799999999999997 58999999987543210 0134455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee-e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+. ..+..-..+ . ....++||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~ 117 (296)
T 3uzp_A 56 KIYKMMQGG-----------------VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR 117 (296)
T ss_dssp HHHHHHTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcC-----------------CCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 565555431 111111111 1 44558999999 8888877543344566666665555544
Q ss_pred HHHHHhcCccccCCCCCceEEec-CCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++. +.++.++|+|||++..+..
T Consensus 118 l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp HHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred HHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 78899999999999999999951 1237899999999886643
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.7e-13 Score=147.11 Aligned_cols=144 Identities=19% Similarity=0.201 Sum_probs=95.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... . .+ .+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~-----------------------~~----------~~~~E~ 58 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P-----------------------VD----------VQMREF 58 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C-----------------------HH----------HHHHHH
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---h-----------------------HH----------HHHHHH
Confidence 57999999999999985 69999999976421100 0 00 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhc--CCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~l~~~ 277 (968)
+.+.++++ ..-+.+-.++. . ...+|||||++|.+|.++...... .++...+...+.++
T Consensus 59 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi 121 (319)
T 4euu_A 59 EVLKKLNH-----------------KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121 (319)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 55554421 01122222222 2 245899999999998876442221 25666666555555
Q ss_pred H--HHHHHhcCccccCCCCCceEEec--CCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|+|+||.|||+.. +.++.++|+|||++..+..
T Consensus 122 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred HHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 4 78899999999999999999831 1236799999999987754
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=4.2e-13 Score=149.34 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEeC-CCCE----EEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-DGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~----VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+.. +|+. ||+|+....... .....+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~------------------------------------~~~~~~ 62 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR------------------------------------QSFQAV 62 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC------------------------------------SCBCSC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH------------------------------------HHHHHH
Confidence 68999999999999964 5665 777765432110 011234
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---ecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|+..+.++.+ + .|.+++ .....++||||++|.+|.+........++...+...+.
T Consensus 63 ~~e~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 122 (325)
T 3kex_A 63 TDHMLAIGSLDH------------------A--HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122 (325)
T ss_dssp CHHHHHHHTCCC------------------T--TBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHH
T ss_pred HHHHHHHhcCCC------------------C--CcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHH
Confidence 455555544321 1 123333 25567899999999999876432222344444444444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|||+||+|||++.+ ++++|+|||+++.+..
T Consensus 123 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSP--SQVQVADFGVADLLPP 167 (325)
T ss_dssp HHHHHHHHHHHTTCCCSCCSSTTEEESSS--SCEEECSCSGGGGSCC
T ss_pred HHHHHHHHHHhCCCCCCccchheEEECCC--CeEEECCCCcccccCc
Confidence 443 788999999999999999999865 8999999999987654
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=6.8e-13 Score=150.54 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=54.5
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCC--HH-------HHHHHHHHHHHHHHHhcCccccCCCCCceEEecCCCCceEEEec
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVN--KQ-------KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~--~~-------~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (968)
.+|||||++ .+|.++......... .. .++..++.. +..+|..|++|||+||.|||++.+ +.++|+||
T Consensus 163 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~a-L~~LH~~~ivHrDikp~NIll~~~--~~~kL~DF 238 (371)
T 3q60_A 163 YLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRL-AANLQSKGLVHGHFTPDNLFIMPD--GRLMLGDV 238 (371)
T ss_dssp EEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEECTT--SCEEECCG
T ss_pred EEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHH-HHHHHHCCCccCcCCHHHEEECCC--CCEEEEec
Confidence 589999999 588776543222222 11 222333333 778999999999999999999865 89999999
Q ss_pred ccccccC
Q 002092 313 GLTKKLS 319 (968)
Q Consensus 313 G~~~~l~ 319 (968)
|+++...
T Consensus 239 G~a~~~~ 245 (371)
T 3q60_A 239 SALWKVG 245 (371)
T ss_dssp GGEEETT
T ss_pred ceeeecC
Confidence 9998765
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=144.66 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=98.2
Q ss_pred ccccccceeEEEEEEe------CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l------~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+. .+|+.||||+.++.....- .-.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 72 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE------------------------------------REA 72 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH------------------------------------HHH
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHH------------------------------------HHH
Confidence 6899999999999985 3578999999876432110 002
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhc----------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAF---------- 263 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~---------- 263 (968)
+.+|.+.+.++.+ ++ .|++++ . ....++||||++|.+|.+.......
T Consensus 73 ~~~E~~~l~~l~~-----------------h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 133 (313)
T 1t46_A 73 LMSELKVLSYLGN-----------------HM--NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133 (313)
T ss_dssp HHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------
T ss_pred HHHHHHHHhhccc-----------------CC--CeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccccc
Confidence 3456666665521 11 133333 2 4667999999999999877542211
Q ss_pred -------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 264 -------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 264 -------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 197 (313)
T 1t46_A 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIKN 197 (313)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT--TEEEECCCGGGSCTTS
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC--CCEEEccccccccccc
Confidence 255555555555544 788999999999999999999865 8999999999887653
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.9e-13 Score=149.99 Aligned_cols=148 Identities=18% Similarity=0.171 Sum_probs=95.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+...... .... ..-.+.+|+
T Consensus 30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------~~~~--------------~~~~~~~E~ 77 (351)
T 3c0i_A 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS------------------SPGL--------------STEDLKREA 77 (351)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT------------------SSSC--------------CHHHHHHHH
T ss_pred eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc------------------cccc--------------hHHHHHHHH
Confidence 5799999999999997 479999999875321100 0000 001234566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc---CCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~---~~~~~~l~~~l~~~~ 278 (968)
+.+.++++ ..-+.+-.++. ....+|||||++|.+|.+....... .++...+...+.+++
T Consensus 78 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 78 SICHMLKH-----------------PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 55555422 11122222333 4556899999999998765432211 245555544444444
Q ss_pred --HHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.++ .+.++|+|||++..+..
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~ 185 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence 7889999999999999999998542 24599999999987654
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.8e-13 Score=149.93 Aligned_cols=142 Identities=17% Similarity=0.241 Sum_probs=92.4
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+....... .....+.+|
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~~~~~E 59 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKS----------------------------------DMHMRVERE 59 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT----------------------------------TCSHHHHHH
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccch----------------------------------hHHHHHHHH
Confidence 36899999999999997 5899999998753211000 000113345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
++.+..+++ ..-+.+-.++. .+..+|||||++| ++.+... ....++...+...+.+++
T Consensus 60 ~~~l~~l~h-----------------pnIv~l~~~~~~~~~~~lv~E~~~g-~l~~~l~-~~~~l~~~~~~~i~~qi~~a 120 (336)
T 3h4j_B 60 ISYLKLLRH-----------------PHIIKLYDVITTPTDIVMVIEYAGG-ELFDYIV-EKKRMTEDEGRRFFQQIICA 120 (336)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCE-EHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEECCCC-cHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 444433321 11122222222 4556899999954 5544432 234456555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||+||+++.+ +.++|+|||++..+.
T Consensus 121 L~~LH~~givH~Dlkp~NIll~~~--~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 121 IEYCHRHKIVHRDLKPENLLLDDN--LNVKIADFGLSNIMT 159 (336)
T ss_dssp HHHHHHHTCCCCCCSTTTEEECTT--CCEEECCSSCTBTTT
T ss_pred HHHHHHCCeEecCCchhhEEEcCC--CCEEEEEeccceecc
Confidence 788999999999999999999865 899999999987654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.5e-13 Score=146.02 Aligned_cols=154 Identities=19% Similarity=0.216 Sum_probs=100.3
Q ss_pred hhhCCCccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHH
Q 002092 108 REFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (968)
Q Consensus 108 ~elg~~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (968)
..+|..+++ |.- .+.||+|++|.||+|+. .+|+.||||+.++...... + ..+
T Consensus 4 ~~~g~~~~~-y~~--~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~----------------------~~~ 56 (278)
T 3cok_A 4 TCIGEKIED-FKV--GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKA--G----------------------MVQ 56 (278)
T ss_dssp HHHCSSGGG-EEE--EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT--T----------------------CHH
T ss_pred ccccccccc-cee--eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhh--h----------------------HHH
Confidence 345555443 221 36899999999999997 5899999998753211000 0 000
Q ss_pred HHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh
Q 002092 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA 262 (968)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~ 262 (968)
.+.+|++.+.++++ + .|++++ . ....++||||++|.+|.+......
T Consensus 57 ----------~~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 106 (278)
T 3cok_A 57 ----------RVQNEVKIHCQLKH------------------P--SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV 106 (278)
T ss_dssp ----------HHHHHHHHHTTBCC------------------T--TBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCS
T ss_pred ----------HHHHHHHHHHhCCC------------------C--CeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhcc
Confidence 12334443333211 1 123333 2 455689999999988877643222
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 107 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN--MNIKIADFGLATQLKM 164 (278)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT--CCEEECCCTTCEECC-
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--CCEEEEeecceeeccC
Confidence 3456655555555544 788999999999999999999865 8999999999988764
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-13 Score=153.21 Aligned_cols=142 Identities=19% Similarity=0.155 Sum_probs=94.2
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+.. +++.||||+.+...... .+.+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 120 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ------------------------------------DELD 120 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHH------------------------------------HHHH
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChh------------------------------------hHHH
Confidence 57999999999999953 57789999876432211 0112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh------cCCCHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------FGVNKQKV 270 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l 270 (968)
+.+|+..+.++.+ ..-+.+-.++. ....+|||||++|.+|.++..... ..+....+
T Consensus 121 ~~~E~~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 183 (367)
T 3l9p_A 121 FLMEALIISKFNH-----------------QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183 (367)
T ss_dssp HHHHHHHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHH
T ss_pred HHHHHHHHHhCCC-----------------CCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHH
Confidence 4456555555421 01122222222 456799999999999988754322 12455555
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCC-CCceEEEeccccccc
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKL 318 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l 318 (968)
...+.+++ +..+|..|++|||+||.|||++.++ +..++|+|||+++.+
T Consensus 184 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 55554444 7889999999999999999998542 235999999998643
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.6e-13 Score=159.12 Aligned_cols=144 Identities=17% Similarity=0.281 Sum_probs=96.2
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.+ +|+.||||+.++...... + ... .+.+|
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~--~----------------------~~~----------~~~~E 66 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL--D----------------------VVG----------KIRRE 66 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHT--T----------------------THH----------HHHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH--H----------------------HHH----------HHHHH
Confidence 468999999999999985 899999999764211000 0 000 13345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.+..+++ ..-+.+-.++. .+..+|||||++|.+|.+... ....++...+...+.+++
T Consensus 67 i~~l~~l~H-----------------pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~a 128 (476)
T 2y94_A 67 IQNLKLFRH-----------------PHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQILSG 128 (476)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCSSEEHHHHTT-SSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 444433321 11122223332 456789999999998877642 122355555555444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+||+++.+ +.++|+|||++..+..
T Consensus 129 L~~LH~~givHrDLkp~NIll~~~--~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 129 VDYCHRHMVVHRDLKPENVLLDAH--MNAKIADFGLSNMMSD 168 (476)
T ss_dssp HHHHHTTTEECSCCSGGGEEECTT--CCEEECCCSSCEECCT
T ss_pred HHHHHHCCCCcccccHHHEEEecC--CCeEEEeccchhhccc
Confidence 788999999999999999999865 8999999999987654
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.3e-13 Score=152.99 Aligned_cols=148 Identities=12% Similarity=0.098 Sum_probs=96.9
Q ss_pred cccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 119 ~~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
..|. .+.||+|++|.||+|+.+ +|+.||||+.+...... .+ ..-
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~~--------------------------------~~~ 60 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RN--------------------------------EVR 60 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHH
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--HH--------------------------------HHH
Confidence 3444 368999999999999974 78999999875321000 00 000
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+.+|.+.+..+.+ ..-+.+-..+. ....++||||++|.+|.+... ....++...+...+.
T Consensus 61 ~~~~E~~il~~l~h-----------------p~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~ 122 (384)
T 4fr4_A 61 NVFKELQIMQGLEH-----------------PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFIC 122 (384)
T ss_dssp HHHHHHHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-TTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHH
Confidence 12345444443321 01111212222 456689999999999876543 222455555555444
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 123 qi~~aL~~LH~~givHrDlkp~NIll~~~--g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 123 ELVMALDYLQNQRIIHRDMKPDNILLDEH--GHVHITDFNIAAMLPR 167 (384)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHCCceeccCcHHHeEECCC--CCEEEeccceeeeccC
Confidence 444 788999999999999999999865 8999999999987643
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-13 Score=150.46 Aligned_cols=147 Identities=19% Similarity=0.217 Sum_probs=97.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ... -++.+|+
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~---------------------~~~----------~~~~~E~ 65 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG---------------------VSR----------EDIEREV 65 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSS---------------------BCH----------HHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccch---------------------hhH----------HHHHHHH
Confidence 57999999999999984 799999998765322110000 000 1234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++++ ..-+.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 66 ~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al 127 (326)
T 2y0a_A 66 SILKEIQH-----------------PNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGV 127 (326)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHT-TSSCCBHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHH-hcCCcCHHHHHHHHHHHHHHH
Confidence 55555422 01122222232 455689999999999877643 223355555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCC--CCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||.||+++.++ ..+++|+|||++..++
T Consensus 128 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp HHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred HHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 889999999999999999998651 1279999999998765
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=7.3e-13 Score=144.24 Aligned_cols=142 Identities=18% Similarity=0.187 Sum_probs=95.9
Q ss_pred ccccccceeEEEEEEeC-CC-------CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 124 TPLATASIAQVHRATLV-DG-------RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G-------~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
+.||+|++|.||+|+.+ +| +.||||+.+....... +
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~---------------------------~--------- 57 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---------------------------E--------- 57 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGH---------------------------H---------
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHH---------------------------H---------
Confidence 67999999999999874 34 5799998754321110 0
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
.+.+|++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.......++...+...+
T Consensus 58 -~~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 119 (289)
T 4fvq_A 58 -SFFEAASMMSKLSH-----------------KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119 (289)
T ss_dssp -HHHHHHHHHHTSCC-----------------TTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHH
T ss_pred -HHHHHHHHHHhCCC-----------------CCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHH
Confidence 13345544444321 01122222222 456789999999999988755433336666555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCc--------eEEEecccccccCHH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR--------PILLDFGLTKKLSSS 321 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~--------i~LiDFG~~~~l~~~ 321 (968)
.+++ +..+|..|++|+|+||+||+++.+ +. ++|+|||++......
T Consensus 120 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~~~~~~~~~kl~Dfg~~~~~~~~ 174 (289)
T 4fvq_A 120 KQLAAAMHFLEENTLIHGNVCAKNILLIRE--EDRKTGNPPFIKLSDPGISITVLPK 174 (289)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEEEEC--CBGGGTBCCEEEECCCCSCTTTSCH
T ss_pred HHHHHHHHHHhhCCeECCCcCcceEEEecC--CcccccccceeeeccCcccccccCc
Confidence 5544 788999999999999999999876 44 999999999876543
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=4.9e-13 Score=144.17 Aligned_cols=141 Identities=18% Similarity=0.220 Sum_probs=88.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+. .|+.||||+.+.......... .+ .+.+|++
T Consensus 13 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~-----------------------~~----------~~~~e~~ 58 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQT-----------------------IE----------NVRQEAK 58 (271)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEC----------C-----------------------HH----------HHHHHHH
T ss_pred eeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHH-----------------------HH----------HHHHHHH
Confidence 6899999999999997 489999998765332111100 01 1334554
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+..+++ + .|++++. ....++||||++|.+|.++. ....++...+...+.+++
T Consensus 59 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~~l~~ 116 (271)
T 3dtc_A 59 LFAMLKH------------------P--NIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIAR 116 (271)
T ss_dssp HHHHCCC------------------T--TBCCEEEEECCC--CEEEEECCTTEEHHHHH--TSSCCCHHHHHHHHHHHHH
T ss_pred HHHhcCC------------------C--CEeeEEEEEecCCceEEEEEcCCCCCHHHHh--hcCCCCHHHHHHHHHHHHH
Confidence 4444321 1 1233332 45578999999999887663 344566666655555544
Q ss_pred -HHHHHhcC---ccccCCCCCceEEecC------CCCceEEEecccccccCH
Q 002092 279 -AHQIYVDG---FFNGDPHPGNFLVSKD------PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G---~~H~D~hPgNIlv~~~------~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..| ++|+|+||+||+++.+ .++.++|+|||++..+..
T Consensus 117 ~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~ 168 (271)
T 3dtc_A 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168 (271)
T ss_dssp HHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------
T ss_pred HHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccc
Confidence 78899999 8999999999999852 147899999999986654
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.37 E-value=4.6e-13 Score=145.23 Aligned_cols=142 Identities=18% Similarity=0.134 Sum_probs=94.1
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.+ +|+.||||+..+...... ..+-.+.+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~e 59 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------------------------------GVEHQLRRE 59 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH----------------------------------TCHHHHHHH
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh----------------------------------hHHHHHHHH
Confidence 368999999999999974 788999998754211100 000112334
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
++.+.++. ++ .|++++. ....++||||++|.+|.+... ....++...+...+.++
T Consensus 60 ~~~l~~l~------------------h~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~-~~~~~~~~~~~~~~~qi 118 (279)
T 3fdn_A 60 VEIQSHLR------------------HP--NILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL 118 (279)
T ss_dssp HHHHTTCC------------------CT--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHH
T ss_pred HHHHHcCC------------------CC--CCcchhheEecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHH
Confidence 44333321 11 2333332 455689999999998877643 22345655555555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+ +..+|..|++|+|+||+||+++.+ ++++|+|||++......
T Consensus 119 ~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 119 ANALSYCHSKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSS 162 (279)
T ss_dssp HHHHHHHHTTTCEECCCCGGGEEECTT--SCEEECSCCEESCC---
T ss_pred HHHHHHHHhCCEecccCChHhEEEcCC--CCEEEEeccccccCCcc
Confidence 4 788999999999999999999865 89999999998766543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.3e-13 Score=150.26 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=88.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+..... -.+.+|+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~E~ 99 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---------------------------------------KIVRTEI 99 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------------------------------C
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhH---------------------------------------HHHHHHH
Confidence 68999999999999985 6899999998643210 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 100 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~L 161 (349)
T 2w4o_A 100 GVLLRLSH-----------------PNIIKLKEIFETPTEISLVLELVTGGELFDRIV-EKGYYSERDAADAVKQILEAV 161 (349)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT-TCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCcceeeeEecCCeEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 01122222232 455689999999998876532 122345555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEec-CCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++. ++++.++|+|||++..+..
T Consensus 162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 8899999999999999999975 2348899999999886643
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.6e-13 Score=163.11 Aligned_cols=142 Identities=20% Similarity=0.238 Sum_probs=97.5
Q ss_pred cccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 125 plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.||+|+||.||+|+.+ ++..||||+.+.+...... + +|.+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~--------------------------~----------~~~~E 386 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--------------------------E----------EMMRE 386 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTH--------------------------H----------HHHHH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHH--------------------------H----------HHHHH
Confidence 6999999999999874 5678999998765321100 0 13445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
++.+.++++ ..-+.+-.++.....+|||||++|.+|.+........++...+...+.+++ +
T Consensus 387 ~~il~~l~h-----------------pniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L 449 (613)
T 2ozo_A 387 AQIMHQLDN-----------------PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449 (613)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 555544321 111222222334567899999999998776432233456666665555554 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 450 ~~LH~~~iiHrDlkp~NILl~~~--~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 450 KYLEEKNFVHRNLAARNVLLVNR--HYAKISDFGLSKALGAD 489 (613)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEET--TEEEECCCSTTTTCC--
T ss_pred HHHHHCCEEcCcCCHHHEEEcCC--CcEEEeeccCcccccCC
Confidence 88999999999999999999976 89999999999887643
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=145.04 Aligned_cols=136 Identities=15% Similarity=0.228 Sum_probs=93.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++...+. +.+|+
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~E~ 81 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK----------------------------------------IKREI 81 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHH----------------------------------------HHHHH
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccchHH----------------------------------------HHHHH
Confidence 6899999999999987 589999999987644322 23344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+.+.++++. ..-+.+-.++. ....+|||||++|.+|.+... .+....+...+.+++
T Consensus 82 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~ 141 (330)
T 3nsz_A 82 KILENLRGG----------------PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILK 141 (330)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCC----------------CCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHH
Confidence 555554310 01122222222 234589999999988766532 245555554444444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||+|||++.+ ++.++|+|||++..+..
T Consensus 142 ~l~~lH~~~ivH~Dikp~Nil~~~~-~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 142 ALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCT
T ss_pred HHHHHHhCCeeeCCCCHHHEEEcCC-CCEEEEEeCCCceEcCC
Confidence 788999999999999999999865 23899999999976543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=7.1e-13 Score=145.09 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=59.8
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHH--------hcCccccCCCCCceEEecCCCCceEEE
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILL 310 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~Li 310 (968)
..+|||||++|.+|.++. ....++...+...+.++. +..+| ..|++|+|+||+|||++.+ +.++|+
T Consensus 80 ~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~--~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN--GQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHH--TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT--SCEEEC
T ss_pred eeEEehhhccCCCHHHHH--hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC--CCEEEe
Confidence 357999999999988764 344566666555555544 78899 8999999999999999865 899999
Q ss_pred ecccccccC
Q 002092 311 DFGLTKKLS 319 (968)
Q Consensus 311 DFG~~~~l~ 319 (968)
|||++..+.
T Consensus 156 Dfg~a~~~~ 164 (301)
T 3q4u_A 156 DLGLAVMHS 164 (301)
T ss_dssp CCTTCEEEE
T ss_pred eCCCeeecc
Confidence 999986553
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-12 Score=152.70 Aligned_cols=144 Identities=17% Similarity=0.203 Sum_probs=96.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||+|+........ .+. -.+.+|+
T Consensus 17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~---------------------------------~~~~~E~ 61 (444)
T 3soa_A 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDH---------------------------------QKLEREA 61 (444)
T ss_dssp EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--HHH---------------------------------HHHHHHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--HHH---------------------------------HHHHHHH
Confidence 5799999999999987 589999999876432110 000 0134565
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 62 ~il~~l~h-----------------pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~-~~~~~~e~~~~~i~~qil~aL 123 (444)
T 3soa_A 62 RICRLLKH-----------------PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAV 123 (444)
T ss_dssp HHHHHCCB-----------------TTBCCEEEEEECSSEEEEEECCCBCCBHHHHHH-HCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55555422 11122223333 456689999999998876543 223455555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||+|||++.+ .++.++|+|||++..+..
T Consensus 124 ~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp HHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred HHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 88999999999999999999853 247899999999977653
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.5e-13 Score=145.95 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=96.8
Q ss_pred ccccccceeEEEEEEeC-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+++.+ +|+.||||+.+........ -.+
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~ 80 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR------------------------------------SGW 80 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHH------------------------------------HHH
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHH------------------------------------HHH
Confidence 68999999999888642 7899999998754321100 013
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec---CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
.+|++.+.++++ ..-+.+-.++.. ...+|||||++|.+|.++. ...+++...+...+.
T Consensus 81 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~i~~ 141 (318)
T 3lxp_A 81 KQEIDILRTLYH-----------------EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQ 141 (318)
T ss_dssp HHHHHHHHHCCC-----------------TTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHG--GGSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------cchhhEEEEEecCCCceEEEEEecccCCcHHHHH--hhCCCCHHHHHHHHH
Confidence 345555555431 011222222222 3347999999999988764 344566666666555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 142 ~l~~~l~~LH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 142 QICEGMAYLHAQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 186 (318)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCGGGCEECCT
T ss_pred HHHHHHHHHHhCCccCCCCchheEEEcCC--CCEEECCccccccccc
Confidence 554 888999999999999999999865 8999999999987654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=8.2e-13 Score=146.60 Aligned_cols=151 Identities=19% Similarity=0.229 Sum_probs=97.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+......-. ........++.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~~~~~~~~~~~E~ 66 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGS-----------------------------AREADPALNVETEI 66 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC--------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcc-----------------------------cccchhhhhHHHHH
Confidence 5799999999999997 47899999998653211000 00001122456677
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
+.+.++.+ ..-+.+-.++.....++||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 67 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~ 128 (322)
T 2ycf_A 67 EILKKLNH-----------------PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQ 128 (322)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCceEeeEEcCCceEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHH
Confidence 66665532 11122333333556799999999999876532 223455555554444443 78
Q ss_pred HHHhcCccccCCCCCceEEecCC-CCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 321 (968)
.+|..|++|+|+||.||+++.++ ++.++|+|||++..+...
T Consensus 129 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 170 (322)
T 2ycf_A 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170 (322)
T ss_dssp HHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCC
T ss_pred HHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccc
Confidence 89999999999999999998541 235999999999887543
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.37 E-value=6.6e-13 Score=154.84 Aligned_cols=138 Identities=22% Similarity=0.219 Sum_probs=96.1
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+. .|+.||||+.+.+... -+|.+|++
T Consensus 199 ~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 238 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 238 (450)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESSCTTS---------------------------------------HHHHHHHH
T ss_pred eeecCcCCeeEEEEEe-cCCeEEEEEeCCchHH---------------------------------------HHHHHHHH
Confidence 6899999999999997 4889999998754210 02345666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c-CCCeEEecccCCCCCCCHHHHHhcC-CCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~-- 278 (968)
.+.++++ ..-+.+-.++. . ...+|||||++|.+|.+........ ++...+...+.++.
T Consensus 239 ~l~~l~h-----------------~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~ 301 (450)
T 1k9a_A 239 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301 (450)
T ss_dssp HHHTCCC-----------------TTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHhccC-----------------CCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 6555422 11122222222 2 2468999999999998875432221 45555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++....
T Consensus 302 l~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 302 MEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 341 (450)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTT--SCEEECCCTTCEECC-
T ss_pred HHHHHhCCeeCCCCCHhhEEECCC--CCEEEeeCCCcccccc
Confidence 788999999999999999999865 8999999999986653
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.37 E-value=8.2e-13 Score=152.58 Aligned_cols=151 Identities=19% Similarity=0.227 Sum_probs=98.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+..+.....-. .........+.+|+
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~~~~~~~~~~~E~ 191 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS-----------------------------AREADPALNVETEI 191 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC-------------------------------------CCHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccc-----------------------------cccchhHHHHHHHH
Confidence 5699999999999997 47899999997643211000 00001122456777
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
+.+.++.+. .-+.+-.++.....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 192 ~~l~~l~hp-----------------niv~l~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~ 253 (419)
T 3i6u_A 192 EILKKLNHP-----------------CIIKIKNFFDAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQ 253 (419)
T ss_dssp HHHHHCCCT-----------------TBCCCCEEEESSEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CEeeEEEEEecCceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHH
Confidence 777665321 1122223333555789999999999877532 223455555544444443 78
Q ss_pred HHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|..|++|||+||.|||++.+ .++.++|+|||+++.+...
T Consensus 254 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~ 295 (419)
T 3i6u_A 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295 (419)
T ss_dssp HHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--
T ss_pred HHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCC
Confidence 8999999999999999999753 1246999999999887653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.3e-13 Score=146.05 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=95.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+......-..... .--.+.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~------------------------------~~~~~~~E~ 74 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE------------------------------KFQEFQREV 74 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHC------------------------------CSHHHHHHH
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHH------------------------------HHHHHHHHH
Confidence 6799999999999997 589999999986543221110000 000133454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+ -.|.+++. ....++||||++|.+|.+........++...+...+.+++
T Consensus 75 ~~l~~l~h--------------------~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~ 134 (287)
T 4f0f_A 75 FIMSNLNH--------------------PNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134 (287)
T ss_dssp HHHTTCCC--------------------TTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC--------------------CCchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHH
Confidence 44443321 12334443 4556899999999888665332333456655555555544
Q ss_pred HHHHHhcC--ccccCCCCCceEEecCCCCc-----eEEEecccccccC
Q 002092 279 AHQIYVDG--FFNGDPHPGNFLVSKDPPHR-----PILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G--~~H~D~hPgNIlv~~~~~g~-----i~LiDFG~~~~l~ 319 (968)
+..+|..| ++|+|+||.||+++.+ +. ++|+|||++....
T Consensus 135 l~~lH~~~~~ivH~dikp~Nil~~~~--~~~~~~~~kl~Dfg~~~~~~ 180 (287)
T 4f0f_A 135 IEYMQNQNPPIVHRDLRSPNIFLQSL--DENAPVCAKVADFGLSQQSV 180 (287)
T ss_dssp HHHHHTSSSCCBCSCCSGGGEEESCC--CTTCSCCEEECCCTTCBCCS
T ss_pred HHHHHhCCCCeecCCCCcceEEEecc--CCCCceeEEeCCCCcccccc
Confidence 78899999 9999999999999864 44 8999999987544
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=6e-13 Score=146.69 Aligned_cols=145 Identities=18% Similarity=0.129 Sum_probs=88.9
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+..-... -. . .-++.+|
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~------------------------~------~~~~~~E 82 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD----AK------------------------A------RADCIKE 82 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC----HH------------------------H------HHHHHHH
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC----HH------------------------H------HHHHHHH
Confidence 36899999999999997 589999999886421100 00 0 0013345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~ 277 (968)
++.+.++++ ..-+.+-..+. ....++||||++|.+|.++.... ...++...+...+.++
T Consensus 83 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi 145 (310)
T 2wqm_A 83 IDLLKQLNH-----------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145 (310)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 555444321 01111222222 45678999999999998765421 1235555555555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 146 ~~~l~~LH~~~i~H~dl~p~NIl~~~~--~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 146 CSALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 188 (310)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCC--------
T ss_pred HHHHHHHhhCCeeCCCCcHHHEEEcCC--CCEEEEeccceeeecC
Confidence 4 788999999999999999999865 8999999999876654
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=8.5e-13 Score=142.70 Aligned_cols=142 Identities=17% Similarity=0.261 Sum_probs=96.9
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.+ +|+.||||+.++...... + ... .+.+|
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~----------------------~~~----------~~~~e 61 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL--D----------------------VVG----------KIKRE 61 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT--T----------------------CHH----------HHHHH
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccch--h----------------------HHH----------HHHHH
Confidence 368999999999999985 899999998764211000 0 000 12345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
++.+.++++ + .|++++ . ....++||||++|.+|.+.... ...++...+...+.++
T Consensus 62 ~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 120 (276)
T 2h6d_A 62 IQNLKLFRH------------------P--HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQI 120 (276)
T ss_dssp HHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHhcCCC------------------C--CEeEEEEEEecCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHH
Confidence 444443321 1 123333 2 4556899999999998876532 2345555555555444
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 121 ~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 121 LSAVDYCHRHMVVHRDLKPENVLLDAH--MNAKIADFGLSNMMSDG 164 (276)
T ss_dssp HHHHHHHHHHCSSCCCCCGGGEEECTT--SCEEECCCCGGGCCCC-
T ss_pred HHHHHHHHHCCCccCCCChhhEEECCC--CCEEEeecccccccCCC
Confidence 4 788999999999999999999865 89999999999877653
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-12 Score=146.95 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=92.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+.... +..+|.
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------------------~~~~E~ 66 (342)
T 2qr7_A 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----------------------------------------DPTEEI 66 (342)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----------------------------------------CCHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----------------------------------------ChHHHH
Confidence 57999999999999985 799999998764321 223344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+. ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 67 ~~l~~~~~h----------------p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~-~~~~~~~~~~~~~~~qi~~al 129 (342)
T 2qr7_A 67 EILLRYGQH----------------PNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-RQKFFSEREASAVLFTITKTV 129 (342)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC----------------CCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 444443210 11122223333 445689999999988876532 222355555555554444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCC--CceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|||+||+|||+..+.+ +.++|+|||++..+.
T Consensus 130 ~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp HHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred HHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 8899999999999999999864311 359999999988654
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3.5e-13 Score=156.93 Aligned_cols=141 Identities=15% Similarity=0.100 Sum_probs=90.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++.....- + ....+.+|.
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~--------------------------------~~~~~~~e~ 199 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--D--------------------------------EVAHTLTEN 199 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC----------------------------------------------
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh--H--------------------------------HHHHHHHHH
Confidence 6899999999999997 4799999999764211000 0 000112222
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.+++ ++. +.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 200 ~~l~~l~------------------h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~a 260 (446)
T 4ejn_A 200 RVLQNSR------------------HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSA 260 (446)
T ss_dssp -CCCCCS------------------CTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHH-HHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 2211111 111 22222222 455689999999999876543 233456555555554444
Q ss_pred HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|. .|++|||+||+|||++.+ +.++|+|||+++...
T Consensus 261 L~~LH~~~giiHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 261 LDYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKEGI 300 (446)
T ss_dssp HHHHHHHTCCCCCCCCGGGEEECSS--SCEEECCCCCCCTTC
T ss_pred HHHHhhcCCEEECCCCHHHEEECCC--CCEEEccCCCceecc
Confidence 788997 999999999999999865 899999999987643
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=145.44 Aligned_cols=140 Identities=20% Similarity=0.255 Sum_probs=94.6
Q ss_pred cccccccceeEEEEEEeC--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhh
Q 002092 123 ETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~--------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (968)
.+.||+|++|.||+|+.. +++.||||+.+...... +.+
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~------------------------------- 85 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLS------------------------------- 85 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---HHH-------------------------------
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---HHH-------------------------------
Confidence 378999999999999863 57899999987543211 000
Q ss_pred ccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh--------
Q 002092 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-------- 262 (968)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-------- 262 (968)
++.+|++.+.++.+ ++ .|++++. ....++||||++|.+|.++.....
T Consensus 86 --~~~~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 144 (334)
T 2pvf_A 86 --DLVSEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144 (334)
T ss_dssp --HHHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC
T ss_pred --HHHHHHHHHHHhhc-----------------CC--CEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccc
Confidence 13345555555521 11 1233332 456789999999999887643211
Q ss_pred -------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 -------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 -------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~ 208 (334)
T 2pvf_A 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDIN 208 (334)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECT
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC--CCEEEcccccccccc
Confidence 1245555555555544 788999999999999999999865 899999999987664
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.4e-13 Score=142.74 Aligned_cols=77 Identities=21% Similarity=0.262 Sum_probs=60.1
Q ss_pred CeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
.++||||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 172 (284)
T 2a19_B 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT--KQVKIGDFGLVTSL 172 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEES
T ss_pred EEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC--CCEEECcchhheec
Confidence 589999999999988754322 3455555555444444 788999999999999999999966 89999999998876
Q ss_pred CH
Q 002092 319 SS 320 (968)
Q Consensus 319 ~~ 320 (968)
..
T Consensus 173 ~~ 174 (284)
T 2a19_B 173 KN 174 (284)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.36 E-value=9.5e-13 Score=147.33 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=94.0
Q ss_pred ccccccceeEEEEEEe------CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l------~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+. .+++.||||+.+....... .-.
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 94 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE------------------------------------REA 94 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHH------------------------------------HHH
Confidence 6899999999999996 2567899999875321100 012
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhc----------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------- 263 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~---------- 263 (968)
+.+|++.+.++.. ++ .|++++. ....+|||||++|.+|.++......
T Consensus 95 ~~~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 155 (344)
T 1rjb_A 95 LMSELKMMTQLGS-----------------HE--NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155 (344)
T ss_dssp HHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred HHHHHHHHHhhcC-----------------CC--CeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchh
Confidence 3456666665521 11 1333332 4567899999999999876432211
Q ss_pred ------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 264 ------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 264 ------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 156 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~~~~~~ 223 (344)
T 1rjb_A 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG--KVVKICDFGLARDIM 223 (344)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT--TEEEECCCGGGSCGG
T ss_pred hhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC--CcEEeCCCccCcccc
Confidence 134444444444444 778999999999999999999965 899999999997654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.2e-13 Score=150.22 Aligned_cols=141 Identities=17% Similarity=0.141 Sum_probs=90.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 51 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG------------------------------------APCTAIREV 51 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------------------------------------------CCCCCCCH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc------------------------------------cchhHHHHH
Confidence 57999999999999985 89999999876432110 011223344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....+|||||++| +|.+........++...+...+.+++ +
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL 113 (324)
T 3mtl_A 52 SLLKDLKH-----------------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGL 113 (324)
T ss_dssp HHHSCCCC-----------------TTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44433321 11122222222 4556899999987 55444322223355555555444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.+ ++++|+|||++.....
T Consensus 114 ~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 114 AYCHRQKVLHRDLKPQNLLINER--GELKLADFGLARAKSI 152 (324)
T ss_dssp HHHHHTTEEESSCCGGGEEECTT--CCEEECSSSEEECC--
T ss_pred HHHHHCCccCCCcCHHHEEECCC--CCEEEccCcccccccC
Confidence 88999999999999999999865 8999999999886653
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=8.6e-13 Score=146.31 Aligned_cols=140 Identities=21% Similarity=0.190 Sum_probs=83.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ + .+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------~----------~~~~E~ 54 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTP--------------------------S----------TAIREI 54 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCSC--------------------------H----------HHHHHH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccH--------------------------H----------HHHHHH
Confidence 57999999999999974 7999999987643211000 0 122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-----cCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~ 276 (968)
+.+.++++ ..-+.+-.++. ....+|||||++| +|.+...... ..++...+...+.+
T Consensus 55 ~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~q 116 (317)
T 2pmi_A 55 SLMKELKH-----------------ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116 (317)
T ss_dssp HHHTTCCB-----------------TTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHH
Confidence 44333211 01112222222 3556899999997 6655533222 13454444443334
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 117 i~~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 117 LLQGLAFCHENKILHRDLKPQNLLINKR--GQLKLGDFGLARAFG 159 (317)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCSSCEETT
T ss_pred HHHHHHHHHHCCeeeCCCChHHeEEcCC--CCEEECcCccceecC
Confidence 33 778999999999999999999865 899999999987653
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.36 E-value=5.9e-13 Score=157.22 Aligned_cols=139 Identities=19% Similarity=0.176 Sum_probs=97.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.+... .+ +|.+|+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----------------------------~~----------~~~~E~ 267 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKEA 267 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC----------------------------HH----------HHHHHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc----------------------------hH----------HHHHHH
Confidence 68999999999999985 5899999998654211 00 244566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++++ ..-+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 268 ~~l~~l~h-----------------pniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~ 330 (495)
T 1opk_A 268 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330 (495)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 66665532 01122222222 45678999999999998774321 12355555555554544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 331 L~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 331 MEYLEKKNFIHRNLAARNCLVGEN--HLVKVADFGLSRLMT 369 (495)
T ss_dssp HHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEECCT
T ss_pred HHHHHhCCcccCCCChhhEEECCC--CcEEEeecccceecc
Confidence 788999999999999999999865 899999999998764
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=143.61 Aligned_cols=142 Identities=17% Similarity=0.159 Sum_probs=92.3
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+...... .. .+.+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------------~~----------~~~~E 60 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---------------------------RS----------RVFRE 60 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC---------------------------HH----------HHHHH
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh---------------------------HH----------HHHHH
Confidence 36799999999999996 489999999976432110 00 12234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.+.++. . ++. +.+-.++. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 61 ~~~l~~~~---~--------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 122 (316)
T 2ac3_A 61 VEMLYQCQ---G--------------HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDVAS 122 (316)
T ss_dssp HHHHHHTC---C--------------CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhc---C--------------CCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHH
Confidence 44443321 1 111 12222222 4566899999999998876532 23455555555444444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCC-CceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.++. +.++|+|||++..+.
T Consensus 123 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred HHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 78899999999999999999986521 239999999987664
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1e-12 Score=142.40 Aligned_cols=144 Identities=14% Similarity=0.132 Sum_probs=95.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ +.++.+|.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~e~ 61 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-----------------------------------EQNALREV 61 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHH-----------------------------------HHHHHHHH
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHH-----------------------------------HHHHHHHH
Confidence 57999999999999985 8999999998754321110 11122343
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHh---cCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~ 277 (968)
..+.++. . ++. +.+-.++. ....+|||||++|.+|.++..... ..++...+...+.++
T Consensus 62 ~~~~~l~---~--------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi 124 (289)
T 1x8b_A 62 YAHAVLG---Q--------------HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124 (289)
T ss_dssp HHHHHSC---S--------------CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHhC---C--------------CCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHH
Confidence 3333321 1 111 22222222 456789999999999988754321 335666555555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEecC-----------------CCCceEEEecccccccC
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKD-----------------PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~-----------------~~g~i~LiDFG~~~~l~ 319 (968)
+ +..+|..|++|+|+||.||+++.+ ....++|+|||++..+.
T Consensus 125 ~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 185 (289)
T 1x8b_A 125 GRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185 (289)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETT
T ss_pred HHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccC
Confidence 4 788999999999999999999843 12478999999988764
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=8.5e-13 Score=150.05 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=58.6
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+|||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||+|||++.+ |.++|+|||+++
T Consensus 111 ~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~--g~ikL~DFG~a~ 187 (373)
T 2r5t_A 111 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 187 (373)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCBCG
T ss_pred CCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC--CCEEEeeCcccc
Confidence 4556899999999998766432 23455554444444443 788999999999999999999865 899999999987
Q ss_pred c
Q 002092 317 K 317 (968)
Q Consensus 317 ~ 317 (968)
.
T Consensus 188 ~ 188 (373)
T 2r5t_A 188 E 188 (373)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.3e-12 Score=156.29 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=59.3
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...+|||||++|.+|.+.... ...++...+...+.+++ +..+|..||+||||||+|||++.+ |.++|+|||+++.
T Consensus 415 ~~~~lV~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~--g~ikL~DFGla~~ 491 (674)
T 3pfq_A 415 DRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKE 491 (674)
T ss_dssp SEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS--SCEEECCCTTCEE
T ss_pred CEEEEEEeCcCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC--CcEEEeecceeec
Confidence 456899999999998776432 23456555555555544 788999999999999999999866 8999999999875
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=4.2e-13 Score=149.19 Aligned_cols=75 Identities=21% Similarity=0.207 Sum_probs=59.6
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc----------CccccCCCCCceEEecCCCCceEE
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD----------GFFNGDPHPGNFLVSKDPPHRPIL 309 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~----------G~~H~D~hPgNIlv~~~~~g~i~L 309 (968)
.+|||||++|.+|.++. ....++...+...+.++. +..+|.. |++|+|+||.|||++.+ +.++|
T Consensus 97 ~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~--~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN--LTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT--CCEEE
T ss_pred EEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC--CeEEE
Confidence 38999999999998874 344566666555555544 7788888 99999999999999865 89999
Q ss_pred EecccccccCH
Q 002092 310 LDFGLTKKLSS 320 (968)
Q Consensus 310 iDFG~~~~l~~ 320 (968)
+|||+++.+..
T Consensus 173 ~DFg~a~~~~~ 183 (322)
T 3soc_A 173 ADFGLALKFEA 183 (322)
T ss_dssp CCCTTCEEECT
T ss_pred ccCCccccccc
Confidence 99999976643
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.36 E-value=9.4e-13 Score=150.29 Aligned_cols=140 Identities=18% Similarity=0.235 Sum_probs=83.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... +. . .+.+|.
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~---------------------------~------~~~~E~ 59 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--DA---------------------------Q------RTFREI 59 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHH--HH---------------------------H------HHHHHH
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChH--HH---------------------------H------HHHHHH
Confidence 6899999999999997 5899999998754322110 00 0 122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++.. ...-+.+-.++. . ...+|||||++| +|.+. +....++...+...+.+++
T Consensus 60 ~~l~~l~~----------------h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~i~~qi~~ 120 (388)
T 3oz6_A 60 MILTELSG----------------HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAV--IRANILEPVHKQYVVYQLIK 120 (388)
T ss_dssp HHHHHTTT----------------CTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHH--HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHhccC----------------CCCCCeeeeEEecCCCCEEEEEecccCc-CHHHH--HHcCCCCHHHHHHHHHHHHH
Confidence 44444321 011122223332 2 235899999986 45443 2333455544444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|||+||+|||++.+ +.++|+|||+++.+.
T Consensus 121 ~L~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 121 VIKYLHSGGLLHRDMKPSNILLNAE--CHVKVADFGLSRSFV 160 (388)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEESS
T ss_pred HHHHHHhCCEEeCCCCHHHeEEcCC--CCEEecCCccccccc
Confidence 788999999999999999999865 899999999998764
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.36 E-value=7.7e-13 Score=143.98 Aligned_cols=139 Identities=20% Similarity=0.182 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... + .+.+|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~----------~~~~E~ 60 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV----------------------------E----------EFLKEA 60 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHH----------------------------H----------HHHHHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHH----------------------------H----------HHHHHH
Confidence 68999999999999985 68999999986542210 0 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++++ ..-+.+-.++. ....++||||++|.+|.++.... ...++...+...+.+++
T Consensus 61 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~ 123 (288)
T 3kfa_A 61 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123 (288)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHH
Confidence 55554422 01122222222 45568999999999988764321 12245555554444443
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 124 l~~lH~~~i~H~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 124 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMT 162 (288)
T ss_dssp HHHHHHHTCCCSCCSGGGEEECGG--GCEEECCCCGGGTSC
T ss_pred HHHHHHCCccCCCCCcceEEEcCC--CCEEEccCccceecc
Confidence 788999999999999999999865 889999999987654
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=9.7e-13 Score=144.98 Aligned_cols=142 Identities=19% Similarity=0.185 Sum_probs=95.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+......... ..+ .+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~~~------~~~~E~ 53 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV-----------------------------IKK------IALREI 53 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HH-----------------------------HHH------HHHHHH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchH-----------------------------HHH------HHHHHH
Confidence 57999999999999985 699999998754322110 000 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....++||||++|.++.++.. ....++...+...+.+++ +
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l 115 (311)
T 4agu_A 54 RMLKQLKH-----------------PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAV 115 (311)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCccchhheeecCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHH
Confidence 55554422 01122222232 455689999999988766532 123455555544444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 116 NFCHKHNCIHRDVKPENILITKH--SVIKLCDFGFARLLTG 154 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC-
T ss_pred HHHHHCCCcCCCCChhhEEEcCC--CCEEEeeCCCchhccC
Confidence 88999999999999999999865 8999999999987764
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.2e-13 Score=152.92 Aligned_cols=148 Identities=18% Similarity=0.223 Sum_probs=96.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......... ....+ .+.+|.
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~---------------------~~~~~----------~~~~E~ 66 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR---------------------GVCRE----------EIEREV 66 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS---------------------SBCHH----------HHHHHH
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc---------------------hhHHH----------HHHHHH
Confidence 57999999999999985 79999999987543211000 00000 123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 67 ~il~~l~h-----------------pnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 128 (361)
T 2yab_A 67 SILRQVLH-----------------PNIITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGV 128 (361)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHT-TCSCCBHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 44433321 11122223333 455689999999999877642 122355555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCC--CceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.++. ..++|+|||++..+..
T Consensus 129 ~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp HHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred HHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 8899999999999999999986521 2799999999987754
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.8e-13 Score=143.66 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +++.||+|+..+..... . + .+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~----~-----------------------~----------~~~~E~ 57 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED----V-----------------------D----------RFKQEI 57 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC----H-----------------------H----------HHHHHH
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch----H-----------------------H----------HHHHHH
Confidence 57999999999999974 68899999876432211 0 0 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+ + .|++++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 58 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~~i~ 116 (277)
T 3f3z_A 58 EIMKSLDH------------------P--NIIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVL 116 (277)
T ss_dssp HHHHTCCC------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CEeeEEEEEecCCeEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 44444321 1 1333332 445689999999998876543 233456655555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEec-CCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||++.. +.++.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 78899999999999999999932 1347899999999876643
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=5.3e-13 Score=162.21 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=98.8
Q ss_pred ccccccceeEEEEEEe---CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATL---VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l---~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||+|+||.||+|.. ++++.||||+.+....... .. -++.+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-------------------------~~----------~~~~~ 419 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-------------------------LK----------DELLA 419 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG-------------------------GH----------HHHHH
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH-------------------------HH----------HHHHH
Confidence 4799999999999965 3578999999875432110 00 12445
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
|++.+.++++. .-+.+-.++.....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 420 E~~il~~l~hp-----------------nIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~~ 481 (635)
T 4fl3_A 420 EANVMQQLDNP-----------------YIVRMIGICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMG 481 (635)
T ss_dssp HHHHHHHCCCT-----------------TBCCEEEEEESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC-----------------CEeeEEEEEecCCEEEEEEccCCCCHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 66666655321 1122222333455689999999999987753 223456665555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++||||||.|||++.+ +.++|+|||+++.+..
T Consensus 482 L~yLH~~~iiHrDLkp~NILl~~~--~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 482 MKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 521 (635)
T ss_dssp HHHHHHTTCCCSCCSGGGEEEEET--TEEEECCTTHHHHTTC
T ss_pred HHHHHHCCEeCCCCChHhEEEeCC--CCEEEEEcCCcccccc
Confidence 788999999999999999999976 8999999999987654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=7.3e-13 Score=149.41 Aligned_cols=139 Identities=20% Similarity=0.191 Sum_probs=92.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ +. +.+|+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~------------------------------~~------~~~E~ 82 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR------------------------------NQ------IIREL 82 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHH------------------------------HH------HHHHH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHH------------------------------HH------HHHHH
Confidence 57999999999999985 7999999998765322111 01 12233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.++... ...++...+...+.+++ +
T Consensus 83 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~~~l 144 (360)
T 3eqc_A 83 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGL 144 (360)
T ss_dssp GGGGGCCC-----------------TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 22222211 01112222222 4556899999999999877532 23455555554444443 6
Q ss_pred HHHHhc-CccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|.. |++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 145 ~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 145 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQL 182 (360)
T ss_dssp HHHHHHHCCCCSCCSGGGEEECTT--CCEEECCCCCCHHH
T ss_pred HHHHHhCCEEcCCccHHHEEECCC--CCEEEEECCCCccc
Confidence 778874 99999999999999865 89999999998654
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=8.4e-13 Score=144.71 Aligned_cols=147 Identities=16% Similarity=0.167 Sum_probs=97.2
Q ss_pred CccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
++.+.|.-. +.||+|++|.||+|+.+ +|+.||||+......... +
T Consensus 16 ~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---------------------------~----- 61 (302)
T 2j7t_A 16 DPNEVWEIV--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---------------------------E----- 61 (302)
T ss_dssp CGGGTEEEE--EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCH---------------------------H-----
T ss_pred CCccceeec--ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHH---------------------------H-----
Confidence 344444333 46999999999999985 699999998764321110 0
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (968)
++.+|++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.......++...+
T Consensus 62 -----~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 119 (302)
T 2j7t_A 62 -----DYIVEIEILATCDH-----------------PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 119 (302)
T ss_dssp -----HHHHHHHHHHHCCC-----------------TTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHH
T ss_pred -----HHHHHHHHHhcCCC-----------------CCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHH
Confidence 13345555444321 00111222222 45678999999999988765433445666666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..
T Consensus 120 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE--GDIRLADFGVSAK 166 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--SCEEECCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCC--CCEEEEECCCCcc
Confidence 65555544 788999999999999999999865 8999999998653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=143.59 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=62.1
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 99 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~a~ 176 (298)
T 3f66_A 99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK--FTVKVADFGLAR 176 (298)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSCGGGC
T ss_pred CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCC--CCEEECcccccc
Confidence 3456899999999999877542333455565555554444 788999999999999999999865 899999999998
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
.+..
T Consensus 177 ~~~~ 180 (298)
T 3f66_A 177 DMYD 180 (298)
T ss_dssp CCSC
T ss_pred cccc
Confidence 7653
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=6.5e-13 Score=147.14 Aligned_cols=140 Identities=16% Similarity=0.205 Sum_probs=94.8
Q ss_pred cccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 123 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
.+.||+|++|.||+|+.+ +++.||||+.+....... +.
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~ 73 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE------------------------------------RI 73 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHH------------------------------------HH
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHH------------------------------------HH
Confidence 368999999999999864 478999998764321100 01
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh---------c
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---------F 263 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~---------~ 263 (968)
.+.+|++.+.++.+ + .|.+++ . ....++||||++|.+|.++..... .
T Consensus 74 ~~~~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 133 (322)
T 1p4o_A 74 EFLNEASVMKEFNC------------------H--HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133 (322)
T ss_dssp HHHHHHHHGGGCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHhcCC------------------C--CEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCC
Confidence 13344444433321 1 233333 2 456789999999999988754221 1
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 264 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 264 ~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 134 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 190 (322)
T 1p4o_A 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYE 190 (322)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT--CCEEECCTTCCCGGGG
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC--CeEEECcCcccccccc
Confidence 234555555454444 788999999999999999999865 8999999999876543
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=8.5e-13 Score=145.39 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=93.9
Q ss_pred ccccccceeEEEEEEe------CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l------~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... .+ +
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~---------------------------------~ 72 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE---LR---------------------------------D 72 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHH---HH---------------------------------H
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHH---HH---------------------------------H
Confidence 6899999999999986 2568999999875432110 00 1
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-----------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (968)
+.+|++.+.++.+ + .|.+++. ....++||||++|.+|.++.....
T Consensus 73 ~~~E~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 132 (314)
T 2ivs_A 73 LLSEFNVLKQVNH------------------P--HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132 (314)
T ss_dssp HHHHHHHHTTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----
T ss_pred HHHHHHHHhhCCC------------------C--ceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccc
Confidence 2334444443311 1 1233332 456789999999999987754211
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 ------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~--~~~kl~Dfg~~~~~~ 201 (314)
T 2ivs_A 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG--RKMKISDFGLSRDVY 201 (314)
T ss_dssp ------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT--TEEEECCCTTCEECT
T ss_pred cccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC--CCEEEcccccccccc
Confidence 1134445555444444 788999999999999999999965 899999999987664
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=147.97 Aligned_cols=144 Identities=18% Similarity=0.214 Sum_probs=95.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+.+ .+.+|+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~---------------------------------~~~~E~ 79 (362)
T 2bdw_A 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQ---------------------------------KLEREA 79 (362)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH--HHHH---------------------------------HHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH--HHHH---------------------------------HHHHHH
Confidence 57999999999999974 79999999986432110 0000 134455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 80 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~al 141 (362)
T 2bdw_A 80 RICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESI 141 (362)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT-TCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55555421 11122222232 455689999999988865532 122345555555554444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.|||++.+. ++.++|+|||++..+..
T Consensus 142 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp HHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 889999999999999999998542 25699999999987653
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=150.41 Aligned_cols=80 Identities=19% Similarity=0.201 Sum_probs=59.7
Q ss_pred CCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCC-CCceEEEeccccc
Q 002092 241 ETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTK 316 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~ 316 (968)
..+|||||++|++|.+..... ...++...+...+.+++ +..+|..|++|||+||+|||++.+. ++.++|+|||+++
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 357999999999987764311 12355555555555544 7889999999999999999998621 4789999999998
Q ss_pred ccCH
Q 002092 317 KLSS 320 (968)
Q Consensus 317 ~l~~ 320 (968)
....
T Consensus 213 ~~~~ 216 (400)
T 1nxk_A 213 ETTS 216 (400)
T ss_dssp ECC-
T ss_pred ccCC
Confidence 7764
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.6e-13 Score=146.75 Aligned_cols=76 Identities=22% Similarity=0.303 Sum_probs=55.9
Q ss_pred eEEecccCCCCCCCHHHHHhc-----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 243 VLILEFMDGIRLNDCESLEAF-----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~-----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
++||||++|.+|.+....... .++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~--~~~kl~Dfg~a 184 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED--MTVCVADFGLS 184 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC-
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC--CCEEEeecccc
Confidence 899999999999877543321 355555555555544 788999999999999999999865 89999999999
Q ss_pred cccCH
Q 002092 316 KKLSS 320 (968)
Q Consensus 316 ~~l~~ 320 (968)
..+..
T Consensus 185 ~~~~~ 189 (323)
T 3qup_A 185 RKIYS 189 (323)
T ss_dssp -----
T ss_pred ccccc
Confidence 87644
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=142.74 Aligned_cols=144 Identities=17% Similarity=0.130 Sum_probs=90.7
Q ss_pred ccccccceeEEEEEEeC--CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G~--~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|+||+|+.. +++ .||||+.++.....-. .. -++.
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------~~----------~~~~ 69 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE------------------------AM----------DDFI 69 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CH------------------------HH----------HHHH
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHH------------------------HH----------HHHH
Confidence 67999999999999853 444 6899987654221100 00 0234
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+|++.+.++.+ ..-+.+-.++.....++||||++|.+|.+........++...+...+.+++
T Consensus 70 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~ 132 (291)
T 1u46_A 70 REVNAMHSLDH-----------------RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132 (291)
T ss_dssp HHHHHHHHCCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCcccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHH
Confidence 45555555421 111222223335567899999999998877544334466666665555554
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 133 ~l~~lH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 133 GMGYLESKRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQ 173 (291)
T ss_dssp HHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCC
T ss_pred HHHHHHhCCcccCCCchheEEEcCC--CCEEEccccccccccc
Confidence 788999999999999999999866 8999999999887653
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=151.43 Aligned_cols=139 Identities=19% Similarity=0.262 Sum_probs=87.7
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||.|++|.||+|+. .+|+.||||+.+....... + .. .+.+|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~---------------------------~~------~~~~E 111 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--H---------------------------AK------RAYRE 111 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHH--H---------------------------HH------HHHHH
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChH--H---------------------------HH------HHHHH
Confidence 37899999999999997 4799999998864321110 0 00 12234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-------CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
.+.+..+.+ ..-+.+-.++.. ...+|||||++|..+ ..-...++...+...+
T Consensus 112 ~~~l~~l~h-----------------pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~----~~~~~~l~~~~~~~~~ 170 (464)
T 3ttj_A 112 LVLMKCVNH-----------------KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC----QVIQMELDHERMSYLL 170 (464)
T ss_dssp HHHHHHCCC-----------------TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHH----HHHTSCCCHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHH----HHHhhcCCHHHHHHHH
Confidence 444444321 011222222221 234899999997422 2222345555554444
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++...
T Consensus 171 ~qil~aL~~lH~~~iiHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAG 215 (464)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCCC----
T ss_pred HHHHHHHHHHHHCCcccCCCChHhEEEeCC--CCEEEEEEEeeeecC
Confidence 4444 788999999999999999999965 899999999987543
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=8.5e-13 Score=153.07 Aligned_cols=143 Identities=17% Similarity=0.205 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+........ . -.+.+|+
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~--~---------------------------------~~~~~E~ 76 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLID--C---------------------------------KRILREI 76 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHH--H---------------------------------HHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHH--H---------------------------------HHHHHHH
Confidence 6899999999999997 47899999998653321110 0 0133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c-----CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
+.+.++++. .-+.+-.++. . ...+|||||++| +|.+... ....++...+...+.+
T Consensus 77 ~~l~~l~h~-----------------nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~q 137 (432)
T 3n9x_A 77 TILNRLKSD-----------------YIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFK-TPIFLTEEHIKTILYN 137 (432)
T ss_dssp HHHHHCCCT-----------------TBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHH-SSCCCCHHHHHHHHHH
T ss_pred HHHHHcCCC-----------------CcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHh-ccCCCCHHHHHHHHHH
Confidence 555554321 1122222221 1 346899999986 5555432 1123555555555555
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
++ +..+|..|++|||+||+|||++.+ +.++|+|||+++.+....
T Consensus 138 il~aL~~LH~~givHrDlkp~NILl~~~--~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 138 LLLGENFIHESGIIHRDLKPANCLLNQD--CSVKVCDFGLARTINSEK 183 (432)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEEC----
T ss_pred HHHHHHHHHHCCCCCCCCCHHHeEECCC--CCEEEccCCCcccccccc
Confidence 44 788999999999999999999865 899999999999876543
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=141.09 Aligned_cols=137 Identities=17% Similarity=0.187 Sum_probs=93.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ + .+.+|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------~----------~~~~e~ 56 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--------------------------E----------NIKKEI 56 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHH--------------------------H----------HHHHHH
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhh--------------------------H----------HHHHHH
Confidence 57999999999999985 7999999997643211000 0 122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
..+.++.+ + .|++++ . ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 57 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~ 115 (276)
T 2yex_A 57 CINKMLNH------------------E--NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLM 115 (276)
T ss_dssp HHHHTCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHH
T ss_pred HHHHhcCC------------------C--CceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHH
Confidence 33333211 1 133333 2 4556899999999999876431 22355555555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 116 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 116 AGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFR 156 (276)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECE
T ss_pred HHHHHHHhCCeeccCCChHHEEEccC--CCEEEeeCCCccccC
Confidence 788999999999999999999865 899999999987653
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=9.9e-13 Score=147.98 Aligned_cols=53 Identities=15% Similarity=0.202 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 244 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CcEEEEeccceeeec
Confidence 34444444444443 788999999999999999999865 899999999997653
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=9.3e-13 Score=146.72 Aligned_cols=147 Identities=20% Similarity=0.239 Sum_probs=96.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- ....+.+|.
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 79 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-----------------------------------CRAEILHEI 79 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-----------------------------------CHHHHHHHH
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-----------------------------------HHHHHHHHH
Confidence 68999999999999975 799999998764322110 001123454
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+. ..-+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 80 ~~l~~l~~~----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~ 143 (327)
T 3lm5_A 80 AVLELAKSC----------------PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143 (327)
T ss_dssp HHHHHTTTC----------------TTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCC----------------CCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 444443220 01112222222 45568999999999988764211 12355555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|+||.||+++.. +++.++|+|||++..+...
T Consensus 144 L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp HHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred HHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 788999999999999999999852 1478999999999887543
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=8.4e-13 Score=145.59 Aligned_cols=142 Identities=18% Similarity=0.146 Sum_probs=94.3
Q ss_pred ccccccceeEEEEEEe------CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l------~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+. .+|+.||||+.+........ -.
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 76 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH------------------------------------RA 76 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH------------------------------------HH
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHH------------------------------------HH
Confidence 6899999999999984 36789999998754321100 01
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcC-----------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFG----------- 264 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~----------- 264 (968)
+.+|.+.+.++.+. ..-+.+-..+. ....++||||++|.+|.++.......
T Consensus 77 ~~~E~~~l~~l~~h----------------p~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 140 (316)
T 2xir_A 77 LMSELKILIHIGHH----------------LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140 (316)
T ss_dssp HHHHHHHHHHHCCC----------------TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------
T ss_pred HHHHHHHHHhcccC----------------CCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhh
Confidence 34455565555210 00112222222 23468999999999988764321110
Q ss_pred ----CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 265 ----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 265 ----~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 141 ~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 199 (316)
T 2xir_A 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 199 (316)
T ss_dssp CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTT
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC--CCEEECCCccccccc
Confidence 34444444444443 778999999999999999999865 889999999997654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=145.68 Aligned_cols=140 Identities=15% Similarity=0.208 Sum_probs=93.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+..+|+.||||+.+......- . . -.+.+|++
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~-----------------------~----------~~~~~E~~ 59 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--T-----------------------L----------DSYRNEIA 59 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHH--H-----------------------H----------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchH--H-----------------------H----------HHHHHHHH
Confidence 68999999999999998999999998764321110 0 0 02345666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+.. ..|++++. ....+||||+ .|.+|.++.. ....++...+...+.+++
T Consensus 60 ~l~~l~~~~------------------~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~ 119 (343)
T 3dbq_A 60 YLNKLQQHS------------------DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSIDPWERKSYWKNMLE 119 (343)
T ss_dssp HHHHHTTTC------------------TTBCCEEEEEECSSEEEEEECC-CSEEHHHHHH-HSCCCCHHHHHHHHHHHHH
T ss_pred HHHhhhhcC------------------CceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 666664310 12333332 3456899995 5667766543 223455555544444444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++ + +.++|+|||++..+...
T Consensus 120 al~~lH~~~iiHrDikp~NIll~-~--~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 120 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 160 (343)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEE-T--TEEEECCCSSSCCC---
T ss_pred HHHHHHhCCeecCCCCcceEEEE-C--CcEEEeecccccccCcc
Confidence 7889999999999999999996 3 78999999999887654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=144.54 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=61.6
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc--------CccccCCCCCceEEecCCCCceEE
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--------GFFNGDPHPGNFLVSKDPPHRPIL 309 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~--------G~~H~D~hPgNIlv~~~~~g~i~L 309 (968)
...+|||||++|.+|.++. ....++...+...+.+++ +..+|.. |++|+|+||.||+++.+ +.++|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~--~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN--GTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT--SCEEE
T ss_pred CceEEEEeccCCCcHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC--CCEEE
Confidence 4568999999999998774 444566666666555554 7788888 99999999999999865 89999
Q ss_pred EecccccccCHH
Q 002092 310 LDFGLTKKLSSS 321 (968)
Q Consensus 310 iDFG~~~~l~~~ 321 (968)
+|||++..+...
T Consensus 184 ~Dfg~a~~~~~~ 195 (337)
T 3mdy_A 184 ADLGLAVKFISD 195 (337)
T ss_dssp CCCTTCEECC--
T ss_pred EeCCCceeeccc
Confidence 999999877653
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=146.19 Aligned_cols=142 Identities=23% Similarity=0.215 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.......... .+ .+.+|+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~------~~~~E~ 75 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-----------------------------KK------IAMREI 75 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHH-----------------------------HH------HHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHH-----------------------------HH------HHHHHH
Confidence 68999999999999985 6999999987543221100 00 123355
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|..+.++.. ...+++...+...+.+++ +
T Consensus 76 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l 137 (331)
T 4aaa_A 76 KLLKQLRH-----------------ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGI 137 (331)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHH
T ss_pred HHHhhCCC-----------------CCEeeEEEEeecCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHH
Confidence 55444421 01112222222 455689999999988776532 233456666655555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 138 ~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 138 GFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFARTLAA 176 (331)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--SCEEECCCTTC-----
T ss_pred HHHHHCCEEccCcChheEEEcCC--CcEEEEeCCCceeecC
Confidence 88999999999999999999865 8999999999976644
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=8.8e-13 Score=143.99 Aligned_cols=137 Identities=17% Similarity=0.239 Sum_probs=87.2
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+.. ..||||+.+......- +.+ .|.+|++
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~--~~~---------------------------------~~~~E~~ 72 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ--QLQ---------------------------------AFKNEVG 72 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCHH--HHH---------------------------------HHHHHHH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCHH--HHH---------------------------------HHHHHHH
Confidence 68999999999999853 4699999865432110 000 1233444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.++++ +. |..++. ....++||||++|.+|.+........++...+...+.+++
T Consensus 73 ~l~~l~h------------------~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~ 132 (289)
T 3og7_A 73 VLRKTRH------------------VN--ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132 (289)
T ss_dssp HHTTCCC------------------TT--BCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------Cc--EEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 4333221 11 222322 5567899999999988765432233455555555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ ++++|+|||++...+
T Consensus 133 L~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 133 MDYLHAKSIIHRDLKSNNIFLHED--NTVKIGDFGLATEKS 171 (289)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEETT--TEEEECCCC------
T ss_pred HHHHHhCCcccccCccceEEECCC--CCEEEccceeccccc
Confidence 788999999999999999999965 899999999987654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.34 E-value=7.1e-13 Score=144.86 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=60.1
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...++||||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~ 165 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES--RNVKIGDFGLAKN 165 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCCCCCSC
T ss_pred CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCC--CCEEEeeCcchhh
Confidence 345899999999999877543222344444444444443 788999999999999999999865 8999999999987
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
+..
T Consensus 166 ~~~ 168 (303)
T 1zy4_A 166 VHR 168 (303)
T ss_dssp TTC
T ss_pred ccc
Confidence 754
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.4e-12 Score=139.55 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=100.2
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhH-hhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIIL-EDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~-~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
.+.||+|++|.||+|+.+ +|+.||||+.++....... .+. .+..+ .+.+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~-----------------------~~~~~------~~~~ 72 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-----------------------QELRE------ATLK 72 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHH-----------------------HHHHH------HHHH
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHH-----------------------HHHHH------HHHH
Confidence 368999999999999984 7999999998754321110 000 11111 1344
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
|.+.+.++... ..-+.+-.++. ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 73 e~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 135 (298)
T 1phk_A 73 EVDILRKVSGH----------------PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLE 135 (298)
T ss_dssp HHHHHHHHTTC----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC----------------CCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHH
Confidence 55566555310 01122222222 4556899999999998877542 33456666555555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 136 ~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 136 VICALHKLNIVHRDLKPENILLDDD--MNIKLTDFGFSCQLDP 176 (298)
T ss_dssp HHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHHCCcccCCCCcceEEEcCC--CcEEEecccchhhcCC
Confidence 788999999999999999999865 8999999999887653
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=143.35 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=94.7
Q ss_pred ccccccceeEEEEEEe---CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATL---VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l---~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||+|++|.||+|.. .+++.||||+.+....... ..+ .+.+
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~-------------------------~~~----------~~~~ 67 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-------------------------LKD----------ELLA 67 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-------------------------HHH----------HHHH
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHH-------------------------HHH----------HHHH
Confidence 4899999999999964 3578999999875321100 000 1334
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
|++.+.++.+ ..-+.+-.++.....++||||++|.+|.++... ...++...+...+.+++
T Consensus 68 e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~ 129 (291)
T 1xbb_A 68 EANVMQQLDN-----------------PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMG 129 (291)
T ss_dssp HHHHHHTCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-----------------CCEEEEEEEECCCCcEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHH
Confidence 5444444321 011222222235667899999999999876432 22356665555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 130 l~~LH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 130 MKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 169 (291)
T ss_dssp HHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHhCCeEcCCCCcceEEEeCC--CcEEEccCCcceeecc
Confidence 788999999999999999999976 8999999999887643
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=9.6e-13 Score=146.57 Aligned_cols=142 Identities=18% Similarity=0.141 Sum_probs=91.6
Q ss_pred ccccccceeEEEEEEe-CCCCE----EEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATL-VDGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~----VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|++|.||+|+. .+|+. ||||+.+...... ..-.|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 64 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 64 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------------------------------------------CHHHH
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHH------------------------------------HHHHH
Confidence 6899999999999996 45665 4677654321100 00124
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.+|+..+.++++. .-+.+-.++.....+++|||++|.+|.+........++...+...+.+++
T Consensus 65 ~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 127 (327)
T 3poz_A 65 LDEAYVMASVDNP-----------------HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127 (327)
T ss_dssp HHHHHHHHHCCBT-----------------TBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-----------------CEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 4566666554320 11222222235567899999999998876543334466666655555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 128 ~~l~~LH~~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 128 KGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169 (327)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCTTHHHHHTT
T ss_pred HHHHHHhhCCeeCCCCChheEEECCC--CCEEEccCcceeEccC
Confidence 888999999999999999999976 8999999999876543
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=148.05 Aligned_cols=141 Identities=15% Similarity=0.121 Sum_probs=96.6
Q ss_pred cccccc--ceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsa--SigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||.| ++|.||+|+.+ +|+.||||+.+...... +... .+.+
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~------~~~~ 75 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-----------------------------EMVT------FLQG 75 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH-----------------------------HHHH------HHHH
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh-----------------------------HHHH------HHHH
Confidence 689999 99999999985 89999999986532111 0000 1234
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~ 278 (968)
|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 76 E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 138 (389)
T 3gni_B 76 ELHVSKLFNH-----------------PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138 (389)
T ss_dssp HHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-----------------CCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence 5555554422 11122222332 45678999999999998775422 13455655555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+
T Consensus 139 ~~l~~LH~~~ivHrDlkp~NIll~~~--~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 139 KALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSNLSM 178 (389)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCGGGCEEC
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccccceee
Confidence 788999999999999999999865 89999999987654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-12 Score=144.89 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=96.0
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.+ +|+.||+|+........- +..+ .+.+|
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~~~~------~~~~E 91 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------HQRE------KMSME 91 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------HHHH------HHHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH----------------------------HHHH------HHHHH
Confidence 368999999999999985 689999999764321100 0000 12334
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+..+.++.+ ..-+.+-.++. ....++||||++|.+|.++.. ....++...+...+.+++
T Consensus 92 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~a 153 (335)
T 2owb_A 92 ISIHRSLAH-----------------QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLG 153 (335)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCeEEEEEecCCeEEEEEecCCCCCHHHHHh-ccCCCCHHHHHHHHHHHHHH
Confidence 444443321 11122222222 345689999999998877643 223466666655555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 154 L~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 154 CQYLHRNRVIHRDLKLGNLFLNED--LEVKIGDFGLATKVE 192 (335)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHCCCEecCCCchhEEEcCC--CCEEEeeccCceecc
Confidence 788999999999999999999865 899999999988664
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-13 Score=149.14 Aligned_cols=144 Identities=17% Similarity=0.174 Sum_probs=88.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+........ +.. .-.+.+|+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------~~~------~~~~~~E~ 63 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DGI------NRTALREI 63 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------------CTHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhh--------------------------hhh------hHHHHHHH
Confidence 57999999999999974 7999999987653221100 000 01234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++| ++.+........++...+...+.+++ +
T Consensus 64 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l 125 (346)
T 1ua2_A 64 KLLQELSH-----------------PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125 (346)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHH
T ss_pred HHHhhCCC-----------------CCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHH
Confidence 55554421 01122222232 5667899999997 44433221111233333333333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 126 ~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 126 EYLHQHWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFG 163 (346)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--CCEEECCCGGGSTTT
T ss_pred HHHHHCCEECCCCCHHHEEEcCC--CCEEEEecccceecc
Confidence 88999999999999999999865 899999999988663
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-13 Score=149.98 Aligned_cols=149 Identities=19% Similarity=0.244 Sum_probs=91.8
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|+.. +++.||||+...... ....+.+.++.+. ..++.
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~e~~~~~~~~-------------------------~~~~~ 96 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG-PLFSELKFYQRVA-------------------------KKDCI 96 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-C-HHHHHHHHHHHHC-------------------------CHHHH
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc-chHHHHHHHHHHh-------------------------hhHHH
Confidence 68999999999999985 688999999876532 2222222222110 11123
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
+|...+..+. ...|++++. ....+|||||+ |.+|.++.... ..++...+.
T Consensus 97 ~e~~~~~~l~--------------------h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~ 154 (345)
T 2v62_A 97 KKWIERKQLD--------------------YLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN-GTFKKSTVL 154 (345)
T ss_dssp HHHHHHHTCS--------------------CCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG-GBCCHHHHH
T ss_pred HHHHhhcccc--------------------ccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhc-CCCCHHHHH
Confidence 3333332221 122334432 23458999999 88887764322 245666666
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..|++|+|+||.|||++.++.+.++|+|||+++.+..
T Consensus 155 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~ 205 (345)
T 2v62_A 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCP 205 (345)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSG
T ss_pred HHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceeccc
Confidence 6555554 788999999999999999999976334999999999987653
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.6e-12 Score=146.34 Aligned_cols=143 Identities=17% Similarity=0.163 Sum_probs=91.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+..-. .. + .+..|.
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~--------------------------~----------~~~~e~ 101 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA--FL--------------------------N----------QAQIEV 101 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHH--HH--------------------------H----------HHHHHH
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH--HH--------------------------H----------HHHHHH
Confidence 68999999999999974 789999999874311 00 0 012344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (968)
+.+..+.+.- ......+..++ . ....+|||||++| +|.+...... .+++...+...+.++
T Consensus 102 ~~l~~l~~~~--------------~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi 166 (382)
T 2vx3_A 102 RLLELMNKHD--------------TEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQM 166 (382)
T ss_dssp HHHHHHHHCS--------------SGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhcc--------------cccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHH
Confidence 4444444310 01112233332 2 4567899999987 6666543221 235555444444443
Q ss_pred H--HHHHH--hcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 278 Y--AHQIY--VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 ~--l~~i~--~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+ +..+| ..|++|||+||+|||++.+.++.++|+|||++..+.
T Consensus 167 ~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 167 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp HHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred HHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 3 55666 579999999999999975445789999999998764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=146.90 Aligned_cols=149 Identities=20% Similarity=0.235 Sum_probs=84.1
Q ss_pred cccccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 115 GGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 115 ~~~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
.++-..+. .++||+|++|.||+|+. .+|+.||||+.+........ ..
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~~-- 73 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------AK-- 73 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHH-----------------------------HH--
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHH-----------------------------HH--
Confidence 33333333 36899999999999996 58999999987643221100 00
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHhcCC
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGV 265 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~ 265 (968)
.+.+|.+.+..+++. .-+.+-.++. ....++|||++ |.+|.++.. ...+
T Consensus 74 ----~~~~E~~~l~~l~hp-----------------nIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~--~~~l 129 (367)
T 2fst_X 74 ----RTYRELRLLKHMKHE-----------------NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKL 129 (367)
T ss_dssp ----HHHHHHHHHHHCCCT-----------------TBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-------CCC
T ss_pred ----HHHHHHHHHHhCCCC-----------------CCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHh--cCCC
Confidence 122344444443210 0111222221 24568999999 678887643 3456
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+...+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++....
T Consensus 130 ~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~--~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 130 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTAD 184 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECC---------
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCC--CCEEEeeccccccccc
Confidence 6555555555544 788999999999999999999865 8999999999986543
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-12 Score=149.52 Aligned_cols=144 Identities=19% Similarity=0.201 Sum_probs=94.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+.+ +|+.||||+.+...... . .+ .+.+|+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~-----------------------~~----------~~~~E~ 58 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P-----------------------VD----------VQMREF 58 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C-----------------------HH----------HHHHHH
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---h-----------------------HH----------HHHHHH
Confidence 57999999999999985 69999999976321100 0 00 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c--CCCeEEecccCCCCCCCHHHHHhc--CCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~l~~~ 277 (968)
+.+.++++ ..-+.+-.++. . ...+|||||++|.+|.++...... +++...+...+.++
T Consensus 59 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi 121 (396)
T 4eut_A 59 EVLKKLNH-----------------KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121 (396)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHH
Confidence 55555421 01122222222 2 245899999999988776432211 25666665555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEec--CCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|+|+||+|||+.. ++++.++|+|||++..+..
T Consensus 122 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred HHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 4 78899999999999999999832 2236799999999987654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=140.42 Aligned_cols=142 Identities=17% Similarity=0.251 Sum_probs=94.3
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+........ + .+ .+.+|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~-----------------------~~----------~~~~E 70 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---P-----------------------ME----------QIEAE 70 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---C-----------------------HH----------HHHHH
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccch---h-----------------------HH----------HHHHH
Confidence 36899999999999997 479999999876432110 0 00 12334
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l 274 (968)
++.+.++.+ + .|++++ . ....++||||++|.+|.+..... ...++...+...+
T Consensus 71 ~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 130 (285)
T 3is5_A 71 IEVLKSLDH------------------P--NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130 (285)
T ss_dssp HHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHhCCC------------------c--hHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHH
Confidence 444443321 1 123333 2 45568999999999887764321 1345655555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||.||+++.+ .++.++|+|||++..+..
T Consensus 131 ~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp HHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred HHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 5544 788999999999999999999642 347899999999987654
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=8.9e-13 Score=142.89 Aligned_cols=138 Identities=22% Similarity=0.216 Sum_probs=88.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+. +|+.||||+.+..... + .+.+|++
T Consensus 27 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~-----------------------------~----------~~~~E~~ 66 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----------------------------Q----------AFLAEAS 66 (278)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------------------------------H----------HHHHTHH
T ss_pred eEEecCCCceEEEEEE-cCCEEEEEEecchhHH-----------------------------H----------HHHHHHH
Confidence 6899999999999987 5899999987643210 0 1223444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (968)
.+.++++ ..-+.+-..+. ....++||||++|.+|.+....... .++...+...+.+++
T Consensus 67 ~l~~l~h-----------------~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~ 129 (278)
T 1byg_A 67 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129 (278)
T ss_dssp HHTTCCC-----------------TTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------CCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHH
Confidence 4333211 11122222222 2356899999999999877543221 145554555444443
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 130 l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 130 MEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 169 (278)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HHHHHhCCccccCCCcceEEEeCC--CcEEEeeccccccccc
Confidence 788999999999999999999865 8999999999876543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-12 Score=142.54 Aligned_cols=147 Identities=18% Similarity=0.156 Sum_probs=92.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+......... . ...++.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-------------------~-------------~~~~~~~e~ 62 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG-------------------G-------------LPISTVREV 62 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS-------------------C-------------CCHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc-------------------c-------------cchhHHHHH
Confidence 5799999999999997 589999999876321100000 0 001123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecC------CCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS------ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~------~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~ 275 (968)
+.+.+++.. .. ..-+.+-.++... ..++||||++| +|.+...... ..++...+...+.
T Consensus 63 ~~l~~l~~~-~h-------------~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~ 127 (308)
T 3g33_A 63 ALLRRLEAF-EH-------------PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 127 (308)
T ss_dssp HHHHHHHHH-CC-------------TTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHH
T ss_pred HHHHHHhhc-CC-------------CCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHH
Confidence 455555431 10 1112222333221 24899999987 6555432111 1255555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..++
T Consensus 128 qi~~al~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~ 171 (308)
T 3g33_A 128 QFLRGLDFLHANCIVHRDLKPENILVTSG--GTVKLADFGLARIYS 171 (308)
T ss_dssp HHHHHHHHHHHTTCCCSCCCTTTEEECTT--SCEEECSCSCTTTST
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEcCC--CCEEEeeCccccccC
Confidence 544 788999999999999999999865 899999999997654
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-12 Score=149.68 Aligned_cols=143 Identities=13% Similarity=0.116 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+..-... + .+..|.
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~--------------------------------~------~~~~E~ 144 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH--------------------------------R------QAAEEI 144 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHH--------------------------------H------HHHHHH
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccchH--------------------------------H------HHHHHH
Confidence 68999999999999874 78999999987532100 0 122344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (968)
+.+..+++.-. .....|.+++. ....+|||||++| +|.+...... .+++...+...+.++
T Consensus 145 ~~l~~l~~~~~--------------~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi 209 (429)
T 3kvw_A 145 RILEHLRKQDK--------------DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSI 209 (429)
T ss_dssp HHHHHHHTTCT--------------TSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhccc--------------cCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 55555544210 11223333332 4556899999976 5554433221 235555555544444
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+ +..+|..|++|||+||.|||++.++...++|+|||++....
T Consensus 210 ~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp HHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred HHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 4 78899999999999999999997622239999999986543
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.33 E-value=6.5e-13 Score=147.43 Aligned_cols=146 Identities=18% Similarity=0.241 Sum_probs=96.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ...+ .+.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---------------------~~~~----------~~~~E~ 66 (321)
T 2a2a_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---------------------VSRE----------EIEREV 66 (321)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSS---------------------BCHH----------HHHHHH
T ss_pred eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccc---------------------hhHH----------HHHHHH
Confidence 57999999999999975 799999999875432110000 0000 134455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 67 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL 128 (321)
T 2a2a_A 67 SILRQVLH-----------------HNVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGV 128 (321)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCcceEEEEEecCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 01112222222 455689999999999887643 122344555555444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCC----ceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPH----RPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g----~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||+||+++.+ + +++|+|||++..+..
T Consensus 129 ~~lH~~~ivH~dikp~NIl~~~~--~~~~~~~kl~Dfg~~~~~~~ 171 (321)
T 2a2a_A 129 NYLHTKKIAHFDLKPENIMLLDK--NIPIPHIKLIDFGLAHEIED 171 (321)
T ss_dssp HHHHHTTEECCCCSGGGEEESCT--TSSSCCEEECCCTTCEECCT
T ss_pred HHHHhCCeecCCCChHHEEEecC--CCCcCCEEEccCccceecCc
Confidence 88999999999999999999865 4 799999999987654
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-12 Score=152.38 Aligned_cols=141 Identities=18% Similarity=0.208 Sum_probs=83.4
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||.|++|.||+|+.+ +|+.||||+.......... . -.+.+|
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~--~---------------------------------~~~~~E 102 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID--C---------------------------------KRILRE 102 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHH--H---------------------------------HHHHHH
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHH--H---------------------------------HHHHHH
Confidence 367999999999999974 8999999987643221110 0 013345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
++.+.++++. .-+.+-.++. ....+|||||++| +|.++.. ....++...+...+.
T Consensus 103 ~~~l~~l~h~-----------------niv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~~~~ 163 (458)
T 3rp9_A 103 IAILNRLNHD-----------------HVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFR-TPVYLTELHIKTLLY 163 (458)
T ss_dssp HHHHHHCCCT-----------------TBCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHH-SSCCCCHHHHHHHHH
T ss_pred HHHHHhCCCC-----------------CCCceEEEEecCCcccCceEEEEEecccc-chhhhcc-cCCCCCHHHHHHHHH
Confidence 5555554220 1122222221 1345899999865 4443321 112355555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+++ +..+|..|++||||||+|||++.+ +.++|+|||+++.+.
T Consensus 164 qi~~aL~~LH~~~iiHrDlKp~NILl~~~--~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 164 NLLVGVKYVHSAGILHRDLKPANCLVNQD--CSVKVCDFGLARTVD 207 (458)
T ss_dssp HHHHHHHHHHHTTCBCCCCCGGGEEECTT--CCEEECCCTTCBCTT
T ss_pred HHHHHHHHHHhCCcCCCCCChhhEEECCC--CCEeecccccchhcc
Confidence 544 788999999999999999999865 899999999998764
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-12 Score=140.70 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=95.5
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|+||+|+.+ +|+.||+|+........- +..+ .+.+|
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~~~~------~~~~e 65 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------HQRE------KMSME 65 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------HHHH------HHHHH
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCH----------------------------HHHH------HHHHH
Confidence 368999999999999985 689999998764321100 0000 12334
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
...+..+.+ ..-+.+-..+. ....++||||++|.+|.++.. ....++...+...+.+++
T Consensus 66 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~ 127 (294)
T 2rku_A 66 ISIHRSLAH-----------------QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLG 127 (294)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeeeeeeccCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 444433311 01112222222 344689999999998877643 223456666555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 128 l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 128 CQYLHRNRVIHRDLKLGNLFLNED--LEVKIGDFGLATKVE 166 (294)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHCCccccCCChHhEEEcCC--CCEEEEeccCceecc
Confidence 788999999999999999999865 899999999987664
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-12 Score=141.65 Aligned_cols=149 Identities=17% Similarity=0.251 Sum_probs=98.6
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ... -.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~---------------------~~~----------~~~~~E~ 59 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRG---------------------VSR----------EEIEREV 59 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS---------------------BCH----------HHHHHHH
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccc---------------------hHH----------HHHHHHH
Confidence 57999999999999985 799999998765422110000 000 1234555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....++||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 60 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l 121 (283)
T 3bhy_A 60 NILREIRH-----------------PNIITLHDIFENKTDVVLILELVSGGELFDFLA-EKESLTEDEATQFLKQILDGV 121 (283)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCeeehhheecCCCeEEEEEeecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55555422 01122222222 455689999999999987653 234466666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCC--CCceEEEecccccccCHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~~ 321 (968)
..+|..|++|+|+||.||+++.++ .++++|+|||++..+...
T Consensus 122 ~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~ 165 (283)
T 3bhy_A 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165 (283)
T ss_dssp HHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--
T ss_pred HHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCC
Confidence 889999999999999999998651 127999999999887653
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-12 Score=143.25 Aligned_cols=145 Identities=17% Similarity=0.195 Sum_probs=93.0
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|+||+|+.+ +|+.||||+.+...... - +..+ .+.+|
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~------------------------~~~~------~~~~e 84 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD----P------------------------VFRT------RMQRE 84 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS----H------------------------HHHH------HHHHH
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC----H------------------------HHHH------HHHHH
Confidence 368999999999999974 79999999976542211 0 0000 12234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+..+.++.+ ..-+.+-.++. ....++||||++|.+|.++... ...++...+...+.+++
T Consensus 85 ~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~ 146 (309)
T 2h34_A 85 ARTAGRLQE-----------------PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSA 146 (309)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCC-----------------CCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 444333211 01112222222 4566899999999999877542 23456666555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++......
T Consensus 147 l~~lH~~~i~H~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 147 LDAAHAAGATHRDVKPENILVSAD--DFAYLVDFGIASATTDE 187 (309)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTT--SCEEECSCCC-------
T ss_pred HHHHHHCcCCcCCCChHHEEEcCC--CCEEEecCccCcccccc
Confidence 788999999999999999999865 89999999998776543
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=142.52 Aligned_cols=148 Identities=17% Similarity=0.098 Sum_probs=99.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... ........+.+|.
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~~~~~~~~e~ 85 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW-------------------------------SPLSDSVTCPLEV 85 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------------------------------------CCCCHHH
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc-------------------------------ccchhhHHHHHHH
Confidence 6799999999999987 5899999999764321110 0011234566777
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecc-cCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEF-MDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~-i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
+.+.++..... .-.|++++. ....++|||+ ++|.+|.+.... ...++...+...+.++
T Consensus 86 ~~l~~l~~~~~----------------h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 148 (312)
T 2iwi_A 86 ALLWKVGAGGG----------------HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQV 148 (312)
T ss_dssp HHHHHHHSSCC----------------CSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHhhcccCC----------------CCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 77777643211 112333332 4567899999 889998876532 2345666555555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 149 ~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~dfg~~~~~~~ 192 (312)
T 2iwi_A 149 VAAIQHCHSRGVVHRDIKDENILIDLR-RGCAKLIDFGSGALLHD 192 (312)
T ss_dssp HHHHHHHHHHTEECCCCSGGGEEEETT-TTEEEECCCSSCEECCS
T ss_pred HHHHHHHHHCCeeecCCChhhEEEeCC-CCeEEEEEcchhhhccc
Confidence 4 788999999999999999999832 38999999999887653
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-12 Score=142.60 Aligned_cols=140 Identities=14% Similarity=0.145 Sum_probs=92.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+...... -++.+|.
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~ 71 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE--------------------------------------EEIKQEI 71 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTT--------------------------------------HHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCcccH--------------------------------------HHHHHHH
Confidence 6899999999999997 589999999976432110 0123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-------cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~ 273 (968)
..+.++.+ ++. +.+-..+. ....+|||||++|.+|.++.... ...++...+...
T Consensus 72 ~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i 134 (326)
T 2x7f_A 72 NMLKKYSH-----------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134 (326)
T ss_dssp HHHHHHCC-----------------STTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHH
T ss_pred HHHHhccC-----------------CCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHH
Confidence 44444421 011 11111221 23458999999999998775432 134555555554
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 135 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 181 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--CCEEECCCTTTC----
T ss_pred HHHHHHHHHHHHHCCccccCCcHHHEEEcCC--CCEEEeeCcCceecCc
Confidence 44444 788999999999999999999865 8999999999887654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=8.6e-13 Score=150.01 Aligned_cols=79 Identities=14% Similarity=0.212 Sum_probs=55.3
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...++||||++|.+|.++........+...+...+.++. +..+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK--FTVKVADFGLARD 241 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC-----
T ss_pred CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC--CCEEEeecccccc
Confidence 456899999999999877532223355555555544444 788999999999999999999865 8999999999987
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
+..
T Consensus 242 ~~~ 244 (373)
T 3c1x_A 242 MYD 244 (373)
T ss_dssp ---
T ss_pred ccc
Confidence 644
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=3.4e-12 Score=138.54 Aligned_cols=144 Identities=18% Similarity=0.214 Sum_probs=95.4
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+.+ .+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~---------------------------------~~~~e~ 56 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQ---------------------------------KLEREA 56 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HHHH---------------------------------HHHHHH
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HHHH---------------------------------HHHHHH
Confidence 57999999999999974 79999999976432110 0000 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 57 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 118 (284)
T 3kk8_A 57 RICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESI 118 (284)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55555421 01112222222 455689999999988866543 233455555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||+++.++ .+.++|+|||++.....
T Consensus 119 ~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp HHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred HHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 889999999999999999998542 24599999999876653
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-12 Score=147.31 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=92.8
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+..+|+.||||+.+......- +. -.+.+|.+
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~--~~---------------------------------~~~~~Ei~ 106 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TL---------------------------------DSYRNEIA 106 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHH--HH---------------------------------HHHHHHHH
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHH--HH---------------------------------HHHHHHHH
Confidence 57999999999999988899999999865321100 00 02345666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++.+.. + .|.+++. ....+|||| +.|.+|.++... ...++...+...+.+++
T Consensus 107 ~l~~l~~~~----------------~--~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 166 (390)
T 2zmd_A 107 YLNKLQQHS----------------D--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLE 166 (390)
T ss_dssp HHHHHTTTC----------------T--TBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHH
T ss_pred HHHHcccCC----------------C--eEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 666664310 1 1233332 345689999 567777665432 22345444444444433
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++ + +.++|+|||+++.+...
T Consensus 167 aL~~lH~~~ivHrDlkp~NIll~-~--~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 167 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 207 (390)
T ss_dssp HHHHHHTTTCCCCCCCGGGEEES-S--SCEEECCCSSSCCC---
T ss_pred HHHHHHHCCeeecCCCHHHEEEE-C--CeEEEEecCccccccCC
Confidence 7889999999999999999995 3 78999999999887543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-12 Score=140.87 Aligned_cols=143 Identities=16% Similarity=0.100 Sum_probs=94.7
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.. +|+.||||+.++.....- ..+-.+.+|
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~~~~~e 64 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE----------------------------------GVEHQLRRE 64 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHT----------------------------------TCHHHHHHH
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchH----------------------------------HHHHHHHHH
Confidence 368999999999999974 788999998764211000 000113345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
++.+.++++ ..-+.+-.++. ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 65 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~ 126 (284)
T 2vgo_A 65 IEIQSHLRH-----------------PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADA 126 (284)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 544443321 01111222222 4556899999999988776432 23455555555544444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 127 l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 127 LHYCHERKVIHRDIKPENLLMGYK--GELKIADFGWSVHAP 165 (284)
T ss_dssp HHHHHTTTEECCCCSGGGEEECTT--CCEEECCCTTCEECS
T ss_pred HHHHHHCCceecCCCHHHEEEcCC--CCEEEecccccccCc
Confidence 788999999999999999999865 899999999886554
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.1e-13 Score=149.51 Aligned_cols=159 Identities=18% Similarity=0.209 Sum_probs=96.6
Q ss_pred CCccccccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHH
Q 002092 112 ESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (968)
Q Consensus 112 ~~~~~~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (968)
..+.++-..+. .+.||+|++|.||+|+. .+|+.||||+.+.........+
T Consensus 19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~---------------------------- 70 (345)
T 3hko_A 19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK---------------------------- 70 (345)
T ss_dssp BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---C----------------------------
T ss_pred chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHH----------------------------
Confidence 34444444444 36899999999999997 5799999999764321110000
Q ss_pred HhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-------
Q 002092 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE------- 261 (968)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~------- 261 (968)
..-.+.+|++.+.++++ ..-+.+-.++. ....+|||||++|.+|.+.....
T Consensus 71 ----~~~~~~~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~ 129 (345)
T 3hko_A 71 ----DVERIKTEVRLMKKLHH-----------------PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK 129 (345)
T ss_dssp ----HHHHHHHHHHHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTE
T ss_pred ----HHHHHHHHHHHHHhCCC-----------------CCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccc
Confidence 00124456666555421 01122222222 44568999999999887653200
Q ss_pred --------------------------------hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCce
Q 002092 262 --------------------------------AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP 307 (968)
Q Consensus 262 --------------------------------~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i 307 (968)
....+...+...+.+++ +..+|..|++|+|+||.||+++.++.+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 209 (345)
T 3hko_A 130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209 (345)
T ss_dssp EEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCE
T ss_pred cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceE
Confidence 00001122222233322 77889999999999999999986533489
Q ss_pred EEEecccccccC
Q 002092 308 ILLDFGLTKKLS 319 (968)
Q Consensus 308 ~LiDFG~~~~l~ 319 (968)
+|+|||++..+.
T Consensus 210 kl~Dfg~a~~~~ 221 (345)
T 3hko_A 210 KLVDFGLSKEFY 221 (345)
T ss_dssp EECCCTTCEEGG
T ss_pred EEeecccccccc
Confidence 999999998664
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-12 Score=143.10 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=58.6
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc---------CccccCCCCCceEEecCCCCceEEE
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD---------GFFNGDPHPGNFLVSKDPPHRPILL 310 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~---------G~~H~D~hPgNIlv~~~~~g~i~Li 310 (968)
.+|||||++|.+|.++. .....+...+...+.+++ +..+|.. |++|||+||+|||++.+ ++++|+
T Consensus 87 ~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~--~~~kL~ 162 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND--GTCVIS 162 (336)
T ss_dssp EEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT--SCEEEC
T ss_pred EEEEEecCCCCcHHHHH--hhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC--CcEEEe
Confidence 47999999999998774 344445554444444443 7788988 99999999999999865 899999
Q ss_pred ecccccccCH
Q 002092 311 DFGLTKKLSS 320 (968)
Q Consensus 311 DFG~~~~l~~ 320 (968)
|||++..+..
T Consensus 163 DFG~a~~~~~ 172 (336)
T 3g2f_A 163 DFGLSMRLTG 172 (336)
T ss_dssp CCTTCEECSS
T ss_pred eccceeeccc
Confidence 9999987653
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.1e-12 Score=143.58 Aligned_cols=137 Identities=19% Similarity=0.209 Sum_probs=93.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.++....... ..+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 60 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA------------------------------------LRTLREI 60 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHH------------------------------------HHHHHHH
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHH------------------------------------HHHHHHH
Confidence 67999999999999974 7999999998654221110 0123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
+.+.++++ + .|.+++. ....++||||++| +|.+. +....++...+...
T Consensus 61 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~~ 117 (353)
T 2b9h_A 61 KILKHFKH------------------E--NIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRV--ISTQMLSDDHIQYF 117 (353)
T ss_dssp HHHHHCCC------------------T--TBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHH--HHHCCCCHHHHHHH
T ss_pred HHHHhCcC------------------C--CcCCeeeeecccccCccceEEEEEeccCc-cHHHH--HhhcCCCHHHHHHH
Confidence 55554421 1 1222221 1456899999986 55444 23345666666555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+...
T Consensus 118 ~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSN--CDLKVCDFGLARIIDES 165 (353)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC--
T ss_pred HHHHHHHHHHHHHCCeecCCCCHHHeEEcCC--CcEEEEecccccccccc
Confidence 55544 788999999999999999999865 89999999999887654
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.5e-12 Score=140.12 Aligned_cols=143 Identities=14% Similarity=0.198 Sum_probs=94.9
Q ss_pred ccccccceeEEEEEEe-C-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL-V-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||+|++|.||+|+. + +|+.||||+.+..-.. .. .+.+|
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--------------------------------~~------~~~~e 61 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY--------------------------------CE------AARSE 61 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH--------------------------------HH------HHHHH
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch--------------------------------hH------HHHHH
Confidence 5799999999999987 3 7899999998643110 00 12345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~ 276 (968)
.+.+..+.+.-. .....+++++ . ....+|||||+ |.+|.+...... ..++...+...+.+
T Consensus 62 ~~~l~~l~~~~~--------------~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~q 126 (339)
T 1z57_A 62 IQVLEHLNTTDP--------------NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQ 126 (339)
T ss_dssp HHHHHHHHHHCT--------------TCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHhhhcCC--------------CCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHH
Confidence 555566654311 1112233333 2 45668999999 667766543221 13455555555555
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCC-----------------CCceEEEecccccccC
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDP-----------------PHRPILLDFGLTKKLS 319 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----------------~g~i~LiDFG~~~~l~ 319 (968)
++ +..+|..|++|+|+||+||+++.+. +++++|+|||++....
T Consensus 127 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 188 (339)
T 1z57_A 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188 (339)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT
T ss_pred HHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc
Confidence 44 7889999999999999999998632 3679999999987644
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.31 E-value=3e-12 Score=144.78 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=94.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++....... . .+.+|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~------~~~~E~ 76 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC------------------------------Q------RTLREI 76 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHH------------------------------H------HHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHH------------------------------H------HHHHHH
Confidence 6899999999999997 47899999998753221100 0 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
+.+.++++. .-+.+-.++. ....++||||++| +|.+. +....++...+...+.+
T Consensus 77 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~--l~~~~~~~~~~~~i~~q 136 (364)
T 3qyz_A 77 KILLRFRHE-----------------NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKL--LKTQHLSNDHICYFLYQ 136 (364)
T ss_dssp HHHHHCCCT-----------------TBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHH--HHHCCCCHHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CCccceeEEecCCccccceEEEEEcccCc-CHHHH--HHhCCCCHHHHHHHHHH
Confidence 555554320 1122222221 1345899999987 55444 33445666666555555
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++ +..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 137 i~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGLARVADP 180 (364)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCG
T ss_pred HHHHHHHHHHCCeecCCCChHhEEECCC--CCEEEEeCcceEecCC
Confidence 44 788999999999999999999865 8999999999986654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.9e-12 Score=142.40 Aligned_cols=147 Identities=13% Similarity=0.050 Sum_probs=93.0
Q ss_pred ccccccceeEEEEEEeC-CC-CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATLV-DG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G-~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||+|++|.||+|+.+ +| +.||||+.+..-... . .+.+|
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--------------------------------~------~~~~E 66 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--------------------------------E------AARLE 66 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHH--------------------------------H------HHHHH
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccccch--------------------------------h------HHHHH
Confidence 57999999999999974 44 789999986432100 0 12345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
++.+.++++.... .....+.+-..+. ....+|||||++|..+..+.......++...+...+.+++
T Consensus 67 ~~~l~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~ 135 (355)
T 2eu9_A 67 INVLKKIKEKDKE-----------NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135 (355)
T ss_dssp HHHHHHHHHHCTT-----------SCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCC-----------CceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 5666666653210 0000122222222 4667899999966444322211112356666555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecC-----------------CCCceEEEecccccccC
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKD-----------------PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~-----------------~~g~i~LiDFG~~~~l~ 319 (968)
+..+|..|++|+|+||+|||++.+ .++.++|+|||++....
T Consensus 136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 193 (355)
T 2eu9_A 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 193 (355)
T ss_dssp HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT
T ss_pred HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc
Confidence 788999999999999999999421 24789999999987543
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.9e-12 Score=142.00 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=60.6
Q ss_pred CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHH--------hcCccccCCCCCceEEecCCCCceEEE
Q 002092 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILL 310 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~Li 310 (968)
..++||||++|.+|.++. ....++...+...+.++. +..+| ..|++|+|+||.||+++.+ ++++|+
T Consensus 114 ~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~--~~~kL~ 189 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIA 189 (342)
T ss_dssp CEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT--SCEEEC
T ss_pred eeEEEEeecCCCcHHHHH--hccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC--CCEEEE
Confidence 568999999999998774 344566666665555544 77889 8999999999999999865 899999
Q ss_pred ecccccccC
Q 002092 311 DFGLTKKLS 319 (968)
Q Consensus 311 DFG~~~~l~ 319 (968)
|||++..+.
T Consensus 190 Dfg~~~~~~ 198 (342)
T 1b6c_B 190 DLGLAVRHD 198 (342)
T ss_dssp CCTTCEEEE
T ss_pred ECCCceecc
Confidence 999987654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.1e-12 Score=140.44 Aligned_cols=139 Identities=17% Similarity=0.141 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+..- . +.+|.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~----------------------------------------~~~e~ 61 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K----------------------------------------ARREV 61 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--H----------------------------------------HHHHH
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecccH--H----------------------------------------HHHHH
Confidence 5799999999999997 589999999875321 0 11232
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~ 276 (968)
..+.+... . ..-+.+-.++. ....+|||||++|.+|.+...... ..++...+...+.+
T Consensus 62 ~~~~~~~~---h-------------~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 125 (299)
T 3m2w_A 62 ELHWRASQ---C-------------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125 (299)
T ss_dssp HHHHHHTT---S-------------TTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred HHHHHhcc---C-------------CCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 22222111 0 01122222221 233589999999999887644221 13566665555555
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccCH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (968)
++ +..+|..|++|+|+||.||+++.+. ++.++|+|||++..+..
T Consensus 126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 172 (299)
T 3m2w_A 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG 172 (299)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence 44 7889999999999999999998631 47899999999987764
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.31 E-value=3.8e-12 Score=144.41 Aligned_cols=140 Identities=18% Similarity=0.272 Sum_probs=87.7
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+....... . .. .+.+|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~---------------------------~~------~~~~E 74 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT--H---------------------------AK------RAYRE 74 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH--H---------------------------HH------HHHHH
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChH--H---------------------------HH------HHHHH
Confidence 36899999999999997 4799999998864321110 0 00 12234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-------CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
+..+..+.+ ..-+.+-.++.. ...+|||||++| ++.+. -...++...+...+
T Consensus 75 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~ 133 (371)
T 2xrw_A 75 LVLMKCVNH-----------------KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQV---IQMELDHERMSYLL 133 (371)
T ss_dssp HHHHHHCCC-----------------TTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHH---HHSCCCHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCccceEEeeccccccccccceEEEEEcCCC-CHHHH---HhhccCHHHHHHHH
Confidence 444444321 111222233321 145899999987 33332 22345665555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 134 ~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGT 179 (371)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCCCC------
T ss_pred HHHHHHHHHHHHCCeecccCCHHHEEEcCC--CCEEEEEeeccccccc
Confidence 5544 788999999999999999999865 8999999999976643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-12 Score=146.73 Aligned_cols=142 Identities=16% Similarity=0.176 Sum_probs=91.0
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+........- ....+.+|
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E 66 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-----------------------------------FPITALRE 66 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSS-----------------------------------SCHHHHHH
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEeccccccc-----------------------------------chHHHHHH
Confidence 36899999999999998 5899999998754321100 00112345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (968)
++.+.++++. .-+.+-.++. .+..+|||||++| ++.+........++...+..
T Consensus 67 ~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~ 128 (351)
T 3mi9_A 67 IKILQLLKHE-----------------NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 128 (351)
T ss_dssp HHHHHHCCCT-----------------TBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHH
T ss_pred HHHHHhccCC-----------------CcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHH
Confidence 5555544220 1122222221 1235899999997 33222211122355555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 129 i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFS 175 (351)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC--CCEEEccchhccccc
Confidence 555444 788999999999999999999865 899999999987653
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.8e-12 Score=142.62 Aligned_cols=142 Identities=16% Similarity=0.123 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+...... + .+..|+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------~------~~~~e~ 82 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT--------------------------------R------SAKIEA 82 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHH--------------------------------H------HHHHHH
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhh--------------------------------h------hhHHHH
Confidence 6899999999999997 589999999986321100 0 112244
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (968)
..+.+++.. ......|.+++ . ....+|||||+ |.+|.++..... .+++...+...+.++
T Consensus 83 ~~l~~l~~~---------------~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi 146 (360)
T 3llt_A 83 DILKKIQND---------------DINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEI 146 (360)
T ss_dssp HHHHHTCCC---------------STTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhccc---------------CCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 444443210 00011233333 2 45668999999 878877643222 135666655555554
Q ss_pred H--HHHHHhcCccccCCCCCceEEecC-----------------------CCCceEEEecccccccC
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKD-----------------------PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~-----------------------~~g~i~LiDFG~~~~l~ 319 (968)
+ +..+|..|++|||+||+|||++.+ .++.++|+|||++...+
T Consensus 147 ~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~ 213 (360)
T 3llt_A 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213 (360)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred HHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence 4 888999999999999999999741 24789999999987644
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.31 E-value=3.4e-12 Score=139.47 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=59.6
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.++||||+.|.+|.+.........+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES--FTVKVADFGLARDIL 175 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECCTTSSCTTT
T ss_pred cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC--CcEEeCcCCCccccc
Confidence 4899999999988776432233455555555544444 788999999999999999999865 899999999998664
Q ss_pred H
Q 002092 320 S 320 (968)
Q Consensus 320 ~ 320 (968)
.
T Consensus 176 ~ 176 (298)
T 3pls_A 176 D 176 (298)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.3e-12 Score=143.22 Aligned_cols=140 Identities=21% Similarity=0.310 Sum_probs=89.1
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+....... ... .+.+|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~~------~~~~E 91 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-----------------------------FAK------RAYRE 91 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHH-----------------------------HHH------HHHHH
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchh-----------------------------HHH------HHHHH
Confidence 36899999999999997 4799999998865332110 000 12344
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cC------CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
+..+.++++ ..-+.+-.++. .. ..++||||++| +|. ......++...+...+
T Consensus 92 ~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~---~~~~~~~~~~~~~~i~ 150 (371)
T 4exu_A 92 LLLLKHMQH-----------------ENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQ---KIMGMEFSEEKIQYLV 150 (371)
T ss_dssp HHHHHHCCC-----------------TTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHH---HHTTSCCCHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCchhhhhheeccCCcccceeEEEEEccccc-cHH---HHhhcCCCHHHHHHHH
Confidence 444444321 11122223332 11 22899999986 332 2223345666655555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 151 ~qi~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNED--CELKILDFGLARHADA 196 (371)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECSTTCC-----
T ss_pred HHHHHHHHHHHHCCCcCCCcCHHHeEECCC--CCEEEEecCccccccc
Confidence 5544 788999999999999999999865 8999999999976543
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.2e-12 Score=143.83 Aligned_cols=81 Identities=21% Similarity=0.167 Sum_probs=59.5
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....+++|||++|.+|.+........++...+...+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++.
T Consensus 88 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kL~DfG~a~ 165 (327)
T 3lzb_A 88 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAK 165 (327)
T ss_dssp SSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCTTC--
T ss_pred cCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC--CCEEEccCccee
Confidence 5567899999999998876543334466666665555554 888999999999999999999866 899999999998
Q ss_pred ccCHH
Q 002092 317 KLSSS 321 (968)
Q Consensus 317 ~l~~~ 321 (968)
.+...
T Consensus 166 ~~~~~ 170 (327)
T 3lzb_A 166 LLGAE 170 (327)
T ss_dssp -----
T ss_pred EccCc
Confidence 76543
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=4.6e-12 Score=141.08 Aligned_cols=139 Identities=16% Similarity=0.150 Sum_probs=95.7
Q ss_pred ccccccceeEEEEEEeC-CC-----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G-----~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+.. +| +.||||+.+....... .-.
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 95 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE------------------------------------KEA 95 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHH------------------------------------HHH
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHH------------------------------------HHH
Confidence 67999999999999974 33 4899999875432110 001
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHh-----------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (968)
+.+|++.+.++.+ ++ .|++++. ....+|||||++|.+|.++.....
T Consensus 96 ~~~E~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 156 (333)
T 2i1m_A 96 LMSELKIMSHLGQ-----------------HE--NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156 (333)
T ss_dssp HHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-----
T ss_pred HHHHHHHHHhhcC-----------------CC--CeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccc
Confidence 3446666655521 11 1333332 456789999999999987754221
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 157 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG--HVAKIGDFGLARDIM 215 (333)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG--GEEEBCCCGGGCCGG
T ss_pred cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC--CeEEECccccccccc
Confidence 1245555555554544 788999999999999999999865 899999999998653
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.1e-12 Score=144.26 Aligned_cols=147 Identities=18% Similarity=0.208 Sum_probs=90.6
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhh----HhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII----LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~----~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|+..+|+.||||+.+......- ..+-. ..+ .+.
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~------------------------~~~------~~~ 77 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSF------------------------LCK------RVL 77 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHH------------------------HHH------HHH
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhh------------------------HHH------HHH
Confidence 58999999999999988899999998865432110 00100 001 234
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
+|++.+.++++. .-+.+-.++. ....+|||||++| ++.+........++...+...
T Consensus 78 ~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~ 139 (362)
T 3pg1_A 78 REIRLLNHFHHP-----------------NILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYF 139 (362)
T ss_dssp HHHHHHHHCCCT-----------------TBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHH
T ss_pred HHHHHHHhCCCc-----------------CccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHH
Confidence 566665554321 1122222221 1234899999997 443332212223555555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 140 ~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 186 (362)
T 3pg1_A 140 MYHILLGLHVLHEAGVVHRDLHPGNILLADN--NDITICDFNLAREDTA 186 (362)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCTTC------
T ss_pred HHHHHHHHHHHHHCcCEecCCChHHEEEcCC--CCEEEEecCccccccc
Confidence 55544 788999999999999999999865 8999999999875443
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.9e-12 Score=141.58 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=92.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+..-... .+ .+.+|+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~---------------------------------~~~~E~ 77 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD----RE---------------------------------EAQREA 77 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHH----HH---------------------------------HHHHHH
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHH----HH---------------------------------HHHHHH
Confidence 6899999999999997 589999999875432111 00 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCCCCCHHHHH---hcCCCHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l 274 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+..... ...++...+...+
T Consensus 78 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 140 (317)
T 2buj_A 78 DMHRLFNH-----------------PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140 (317)
T ss_dssp HHHHTCCC-----------------TTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred HHHhhcCC-----------------CCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 44443321 00111111111 22457999999999998765431 2335666655555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 141 ~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDE--GQPVLMDLGSMNQAC 185 (317)
T ss_dssp HHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCSSCEESC
T ss_pred HHHHHHHHHHHhCCcccCCCCHHHEEEcCC--CCEEEEecCcchhcc
Confidence 5544 788999999999999999999865 899999999987654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.30 E-value=3.6e-12 Score=141.28 Aligned_cols=145 Identities=19% Similarity=0.183 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEe--CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL--VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l--~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||+|++|.||+|+. .+|+.||||+.+...... .....+.+|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~~~~~~~~e 61 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------------------------------GMPLSTIRE 61 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------------------------------SCBCTHHHH
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-----------------------------------cCCchhhHH
Confidence 6899999999999997 368999999876432110 011123445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l 274 (968)
.+.+.++... .. ..-+.+-.++. ....++||||++| +|.+..... ...++...+...+
T Consensus 62 ~~~l~~l~~~-~h-------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~ 126 (326)
T 1blx_A 62 VAVLRHLETF-EH-------------PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126 (326)
T ss_dssp HHHHHHHHHT-CC-------------TTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHH
T ss_pred HHHHHhhhcc-CC-------------CCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHH
Confidence 5555555421 10 00112222221 2345899999996 665553221 1225566555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..++.
T Consensus 127 ~qi~~~l~~lH~~gi~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~~ 172 (326)
T 1blx_A 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSF 172 (326)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECSCCSCCCCCG
T ss_pred HHHHHHHHHHHHCCceeccCCHHHeEEcCC--CCEEEecCcccccccC
Confidence 5544 788999999999999999999865 8999999999987754
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.9e-12 Score=139.80 Aligned_cols=142 Identities=13% Similarity=0.051 Sum_probs=92.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
..||.|++|+||+|+. .+|+.||||+.+..-.... + .+.+|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------------~----------~~~~e~ 70 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---------------------------Q----------PLHEEI 70 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------------------------------H----------HHHHHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHH---------------------------H----------HHHHHH
Confidence 4799999999999997 5789999998764321100 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc--CCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~l~~~~- 278 (968)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.++...... ..+...+...+.+++
T Consensus 71 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 133 (295)
T 2clq_A 71 ALHKHLKH-----------------KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133 (295)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHH
Confidence 44333311 01122222222 4556899999999999877543211 223444433333333
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 134 ~l~~lH~~~i~H~dl~p~Nil~~~~-~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 134 GLKYLHDNQIVHRDIKGDNVLINTY-SGVLKISDFGTSKRLAG 175 (295)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETT-TCCEEECCTTTCEESCC
T ss_pred HHHHHHhCCEEccCCChhhEEEECC-CCCEEEeecccccccCC
Confidence 788999999999999999999862 38999999999987654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.9e-12 Score=144.87 Aligned_cols=129 Identities=13% Similarity=0.076 Sum_probs=80.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+|+.||||+.+..-.. .+ .+.+|+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------------~~------~~~~E~ 84 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY--------------------------------TE------TALDEI 84 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH--------------------------------HH------HHHHHH
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcc--------------------------------hH------HHHHHH
Confidence 5799999999999987 57899999998743110 00 123466
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
+.+.++++.... ......|.+++. ....+|||||+.|..+..+......+++...+...+
T Consensus 85 ~~l~~l~~~~~~------------~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~ 152 (397)
T 1wak_A 85 RLLKSVRNSDPN------------DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 152 (397)
T ss_dssp HHHHHHHHSCTT------------CGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHH
T ss_pred HHHHHHhhcCCC------------CCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHH
Confidence 666666642110 000112223222 234689999996644433322111345665555555
Q ss_pred HHHH--HHHHHhc-CccccCCCCCceEEecC
Q 002092 275 TRAY--AHQIYVD-GFFNGDPHPGNFLVSKD 302 (968)
Q Consensus 275 ~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~ 302 (968)
.+++ +..+|.. |++|||+||+|||++.+
T Consensus 153 ~qi~~aL~~lH~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp HHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred HHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence 5544 7889998 99999999999999854
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-12 Score=142.89 Aligned_cols=144 Identities=13% Similarity=0.124 Sum_probs=92.1
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+........ ..+-.+.+|
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------~~~~~~~~E 56 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIP---------------------------------NGEANVKKE 56 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHST---------------------------------THHHHHHHH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccc---------------------------------hhHHHHHHH
Confidence 36899999999999997 47999999987642211100 001123445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRA 277 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~ 277 (968)
.+.+.++++ ..-+.+-.++. ....+|||||++|. +.+.... ....++...+...+.++
T Consensus 57 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi 118 (305)
T 2wtk_C 57 IQLLRRLRH-----------------KNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQL 118 (305)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHH
Confidence 544443321 11122223332 23568999999986 3333221 12335555555555444
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 119 ~~al~~LH~~~i~H~dlkp~NIl~~~~--~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 119 IDGLEYLHSQGIVHKDIKPGNLLLTTG--GTLKISALGVAEALH 160 (305)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHHHHCCeeecCCCcccEEEcCC--CcEEeeccccccccC
Confidence 4 788999999999999999999865 899999999998764
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-12 Score=141.84 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=87.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+. .|+.||||+.+..... -.|.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 53 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER---------------------------------------KAFIVELR 53 (307)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEECSSTTHH---------------------------------------HHHHHHHH
T ss_pred eEeecCCCceEEEEEE-CCeeEEEEEecChhHH---------------------------------------HHHHHHHH
Confidence 6899999999999997 4889999987532110 01334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHh--cCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (968)
.+.++++ + .|.+++. ....+|||||++|.+|.++..... .......+...+.++.
T Consensus 54 ~l~~l~h------------------p--~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 113 (307)
T 2eva_A 54 QLSRVNH------------------P--NIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113 (307)
T ss_dssp HHHHCCC------------------T--TBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHH
T ss_pred HHhcCCC------------------C--CcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHH
Confidence 5554421 1 1334443 455789999999999887643111 1234455554444433
Q ss_pred -HHHHHh---cCccccCCCCCceEEecCCCCc-eEEEecccccccC
Q 002092 279 -AHQIYV---DGFFNGDPHPGNFLVSKDPPHR-PILLDFGLTKKLS 319 (968)
Q Consensus 279 -l~~i~~---~G~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~l~ 319 (968)
+..+|. .|++|+|+||.||+++.+ +. ++|+|||++..+.
T Consensus 114 ~l~~LH~~~~~~ivH~dlkp~NIll~~~--~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 114 GVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ 157 (307)
T ss_dssp HHHHHHTCSSSCCCCCCCSGGGEEEETT--TTEEEECCCCC-----
T ss_pred HHHHHHhCCCCCeecCCCChhHEEEeCC--CCEEEEcccccccccc
Confidence 677888 899999999999999865 55 7999999987654
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=5.7e-12 Score=141.76 Aligned_cols=140 Identities=21% Similarity=0.290 Sum_probs=91.0
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+....... ... .+.+|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~~------~~~~E 73 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-----------------------------FAK------RAYRE 73 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHH-----------------------------HHH------HHHHH
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchH-----------------------------HHH------HHHHH
Confidence 47899999999999997 4799999999864322110 000 12344
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-------CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
+..+.++++ ..-+.+-.++.. ...++||||++| +|.+.. ...++...+...+
T Consensus 74 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~ 132 (353)
T 3coi_A 74 LLLLKHMQH-----------------ENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM---GLKFSEEKIQYLV 132 (353)
T ss_dssp HHHHHHCCC-----------------TTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTT---TSCCCHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCcccHhheEecccccccceeEEEEeccccC-CHHHHh---cCCCCHHHHHHHH
Confidence 444444321 011222222221 234899999986 555432 2345655555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 133 ~qi~~al~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNED--CELKILDFGLARHADA 178 (353)
T ss_dssp HHHHHHHHHHHHTTCCCSSCCGGGEEECTT--CCEEECSTTCTTC---
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEeECCC--CcEEEeecccccCCCC
Confidence 5544 788999999999999999999865 8999999999987653
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-12 Score=139.39 Aligned_cols=142 Identities=16% Similarity=0.229 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+.+ +|+.||||+.+...... +-.+.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 57 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-------------------------------------DSSLENEI 57 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------------------------------------HHHHHH
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccccc-------------------------------------hHHHHHHH
Confidence 57999999999999974 89999999986432100 00133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l 119 (304)
T 2jam_A 58 AVLKKIKH-----------------ENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAV 119 (304)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCeeehhhhcccCCEEEEEEEcCCCccHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 01122222232 455689999999999877643 233456555555554444 7
Q ss_pred HHHHhcCccccCCCCCceEEec-CCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|+|+||.||++.. +.++.++|+|||++.....
T Consensus 120 ~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp HHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred HHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 8899999999999999999932 1348899999999876543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.8e-12 Score=144.43 Aligned_cols=144 Identities=17% Similarity=0.133 Sum_probs=91.8
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+. .+|+.||||+.+......- ..-.+.+|
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E 83 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG-----------------------------------VPGTAIRE 83 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------------------------------------CHHH
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccc-----------------------------------cchhHHHH
Confidence 36899999999999996 4899999999864422100 00123445
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
++.+.++++ ..-+.+-.++. ....+|||||++| +|.+... ....++...+...+.+++
T Consensus 84 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~~~~~~~~~i~~ql~~~ 144 (329)
T 3gbz_A 84 VSLLKELQH-----------------RNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMD-KNPDVSMRVIKSFLYQLING 144 (329)
T ss_dssp HHHGGGCCC-----------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHH-HCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-----------------CCcceEEEEEecCCEEEEEEecCCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHH
Confidence 555444321 11122223333 4566899999997 5555432 222455555555554444
Q ss_pred HHHHHhcCccccCCCCCceEEecC---CCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||+|||++.+ ..+.++|+|||++..+..
T Consensus 145 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred HHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 788999999999999999999632 235699999999876643
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=4.2e-12 Score=137.41 Aligned_cols=143 Identities=19% Similarity=0.205 Sum_probs=95.1
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- + .+ .+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~---------------------------~~------~~~~e~ 56 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--E---------------------------KQ------MLVSEV 56 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHH--H---------------------------HH------HHHHHH
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHH--H---------------------------HH------HHHHHH
Confidence 68999999999999984 899999999865421100 0 00 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhc---CCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~---~~~~~~l~~~l~~ 276 (968)
+.+.++++ ..-+.+-..+. ....++||||++|.+|.++...... .++...+...+.+
T Consensus 57 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~ 119 (279)
T 2w5a_A 57 NLLRELKH-----------------PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119 (279)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHH
Confidence 55554421 00111212221 3446899999999999887543221 2566665555555
Q ss_pred HH--HHHHHhcC-----ccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 277 AY--AHQIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 277 ~~--l~~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+. +..+|..| ++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 120 i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~--~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNH 168 (279)
T ss_dssp HHHHHHHHHHHC------CCCCCSGGGEEECSS--SCEEECCCCHHHHC--
T ss_pred HHHHHHHHhcccCCCCeeEEeccchhhEEEcCC--CCEEEecCchheeecc
Confidence 44 78899999 9999999999999865 8999999999877654
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-12 Score=150.48 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=97.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+ .-.+.+|+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~---------------------------------~~~~~~E~ 72 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KD---------------------------------TSTILREV 72 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SC---------------------------------HHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hH---------------------------------HHHHHHHH
Confidence 57999999999999974 89999999875321100 00 01133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 73 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 73 ELLKKLDH-----------------PNIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55555422 11122223333 455689999999998876543 234566666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.. .++.++|+|||++..+..
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 88999999999999999999642 236799999999987654
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-12 Score=140.34 Aligned_cols=143 Identities=20% Similarity=0.199 Sum_probs=88.0
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|++|.||+|+.. +++.||||+.+......- +. -.+.
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~ 84 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR--EI---------------------------------EEFL 84 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHH--HH---------------------------------HHHH
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchh--HH---------------------------------HHHH
Confidence 67999999999999863 456899998764321110 00 0133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c-----CCCeEEecccCCCCCCCHHHHHh-----cCCCHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLEA-----FGVNKQ 268 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~~-----~~~~~~ 268 (968)
+|++.+.++++ ..-+.+-.++. . ...++||||++|.+|.+...... ..++..
T Consensus 85 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 147 (313)
T 3brb_A 85 SEAACMKDFSH-----------------PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ 147 (313)
T ss_dssp HHHHHHHTCCC-----------------TTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHH
T ss_pred HHHHHHhcCCC-----------------CCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHH
Confidence 45555444321 01112222222 1 13389999999999887643211 235555
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 148 ~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 199 (313)
T 3brb_A 148 TLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD--MTVCVADFGLSKKIYS 199 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT--SCEEECSCSCC-----
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC--CcEEEeecCcceeccc
Confidence 5555555544 788999999999999999999865 8999999999987654
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.3e-12 Score=140.82 Aligned_cols=77 Identities=17% Similarity=0.274 Sum_probs=56.2
Q ss_pred CCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
...++||||++| +|.+. +....+....+...+.+++ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..
T Consensus 95 ~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 95 NSVYIVQEYMET-DLANV--LEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE-DLVLKIGDFGLARI 170 (320)
T ss_dssp SEEEEEEECCSE-EHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT-TTEEEECCCTTCBC
T ss_pred CceeEEeeccCC-CHHHH--hhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC-CCeEEEccCccccc
Confidence 345799999986 66554 2334455555554444443 788999999999999999999743 37899999999987
Q ss_pred cCH
Q 002092 318 LSS 320 (968)
Q Consensus 318 l~~ 320 (968)
+..
T Consensus 171 ~~~ 173 (320)
T 2i6l_A 171 MDP 173 (320)
T ss_dssp C--
T ss_pred cCC
Confidence 654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.28 E-value=6.3e-12 Score=136.72 Aligned_cols=140 Identities=12% Similarity=0.150 Sum_probs=82.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+......... .+..|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------------------~~~~~~ 56 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK------------------------------------RLLMDL 56 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHH------------------------------------HHHHHH
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHH------------------------------------HHHHHH
Confidence 6799999999999997 589999999987543211000 000111
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~ 275 (968)
.. ....+. ++ .|++++ . ....+|||||++| ++.+.... ....++...+...+.
T Consensus 57 ~~---~~~~~~--------------h~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~ 116 (290)
T 3fme_A 57 DI---SMRTVD--------------CP--FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAV 116 (290)
T ss_dssp HH---HHTTCC--------------CT--TBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HH---HHHhCC--------------CC--eEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 11 011111 11 223333 2 4567899999987 55443221 123455555555555
Q ss_pred HHH--HHHHHhc-CccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 276 RAY--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 276 ~~~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+++ +..+|.. |++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 117 qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 117 SIVKALEHLHSKLSVIHRDVKPSNVLINAL--GQVKMCDFGISGYLVDD 163 (290)
T ss_dssp HHHHHHHHHHHHSCCCCCCCSGGGCEECTT--CCEEBCCC---------
T ss_pred HHHHHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeecCCccccccc
Confidence 544 7888998 99999999999999865 89999999998776543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-12 Score=157.17 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEeC--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||.|++|.||+|+.+ +|+.||||+..+...... .. .+.+|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~------------------------------~~------~~~~E 129 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEA------------------------------QA------MAMAE 129 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHH------------------------------HH------HHHHH
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHH------------------------------HH------HHHHH
Confidence 68999999999999975 699999998764321110 00 11223
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCC-----CeEEecccCCCCCCCHHHHHhcCCCHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSE-----TVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~-----~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (968)
++.+.++++ + .|++++. ... .+|||||++|.+|.+... ..++...+..
T Consensus 130 ~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~---~~l~~~~~~~ 186 (681)
T 2pzi_A 130 RQFLAEVVH------------------P--SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---QKLPVAEAIA 186 (681)
T ss_dssp HGGGGGCCC------------------T--TBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHH
T ss_pred HHHHHhcCC------------------C--CcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh---CCCCHHHHHH
Confidence 333322211 1 2333332 222 489999999999987632 2566666666
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+.+++ +..+|..|++|||+||.|||++. ++++|+|||+++.+..
T Consensus 187 ~~~qi~~aL~~lH~~giiHrDlkp~NIll~~---~~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTE---EQLKLIDLGAVSRINS 233 (681)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECS---SCEEECCCTTCEETTC
T ss_pred HHHHHHHHHHHHHHCCCeecccChHHeEEeC---CcEEEEecccchhccc
Confidence 666555 88899999999999999999974 4899999999987653
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.8e-12 Score=145.02 Aligned_cols=76 Identities=24% Similarity=0.285 Sum_probs=54.4
Q ss_pred CeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 242 TVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
.+|||||++| +|.+.... ....++...+...+.+++ +..+|..|++|||+||+||+++.+ ++.++|+|||++.
T Consensus 113 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~-~~~~kl~Dfg~a~ 190 (383)
T 3eb0_A 113 LNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK-DNTLKLCDFGSAK 190 (383)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETT-TTEEEECCCTTCE
T ss_pred EEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCC-CCcEEEEECCCCc
Confidence 5699999997 54443221 112345554444444443 778999999999999999999842 3899999999998
Q ss_pred ccC
Q 002092 317 KLS 319 (968)
Q Consensus 317 ~l~ 319 (968)
.+.
T Consensus 191 ~~~ 193 (383)
T 3eb0_A 191 KLI 193 (383)
T ss_dssp ECC
T ss_pred ccC
Confidence 664
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.7e-12 Score=143.65 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=95.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+......-. .. .-...-.+.+|+
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~------------------------~~-----~~~~~~~~~~E~ 80 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC------------------------WI-----EDPKLGKVTLEI 80 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTS------------------------EE-----EETTTEEEEHHH
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhccccc------------------------cc-----chHHHHHHHHHH
Confidence 6899999999999996 58999999998754210000 00 000111345566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCC-CCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGI-RLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~-~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+ ..-+.+-.++. ....++||||+.+. +|.+... ....++...+...+.+++
T Consensus 81 ~~l~~l~h-----------------~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~-~~~~l~~~~~~~i~~qi~~~ 142 (335)
T 3dls_A 81 AILSRVEH-----------------ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFRQLVSA 142 (335)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH-TCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 65554421 11122222232 45568999998644 6665432 122355555555554444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 143 L~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 143 VGYLRLKDIIHRDIKDENIVIAED--FTIKLIDFGSAAYLER 182 (335)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHhCCeEEeccCHHHEEEcCC--CcEEEeecccceECCC
Confidence 788999999999999999999865 8999999999987653
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=6.1e-12 Score=153.46 Aligned_cols=143 Identities=19% Similarity=0.192 Sum_probs=97.8
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||.|++|.||+|+.+ .+..||||+.+........ -.|.
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 439 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR------------------------------------EKFL 439 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHH------------------------------------HHHH
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHH------------------------------------HHHH
Confidence 57999999999999974 2567999987643221100 0234
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+|+..+.++.+. .-+.+-.++..+..++||||++|.+|.+.........+...+...+.+++
T Consensus 440 ~E~~~l~~l~Hp-----------------nIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~ 502 (656)
T 2j0j_A 440 QEALTMRQFDHP-----------------HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502 (656)
T ss_dssp HHHHHHHHCCCT-----------------TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-----------------CCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 455555554220 01122222235567899999999999887543333456665555444444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 503 aL~~LH~~givHrDikp~NILl~~~--~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 503 ALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCCCCCCSCCC-
T ss_pred HHHHHHhCCccccccchHhEEEeCC--CCEEEEecCCCeecCCC
Confidence 788999999999999999999976 89999999999887643
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.27 E-value=6e-12 Score=139.65 Aligned_cols=146 Identities=18% Similarity=0.133 Sum_probs=99.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.+....... ..+..+-.+.+|+
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~~~~~~~~E~ 97 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------------------------------GELPNGTRVPMEV 97 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE-------------------------------EECTTCCEEEHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh-------------------------------hhhhhhhHHHHHH
Confidence 5799999999999996 5899999998764321100 0011223456677
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCC-CCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDG-IRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G-~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
..+.++.+. ...|++++ . ....++|||++++ .+|.+... ....++...+...+.++
T Consensus 98 ~~l~~l~~~------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~-~~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 98 VLLKKVSSG------------------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQV 158 (320)
T ss_dssp HHHHHHCSS------------------SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHH
T ss_pred HHHHhhccC------------------CCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHh-ccCCCCHHHHHHHHHHH
Confidence 777666421 11233333 2 4556899999986 77776543 23345555555544444
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKD 202 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCS
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCC-CCCEEEeeCcccccccc
Confidence 4 788999999999999999999832 38999999999887653
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.27 E-value=2.6e-12 Score=140.54 Aligned_cols=140 Identities=18% Similarity=0.186 Sum_probs=88.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 53 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------------------------------VPSTAIREI 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC-------------------------------------------CCHHHHHHH
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchh-----------------------------------hHHHHHHHH
Confidence 57999999999999985 899999998764321100 000123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++.+ ..-+.+-.++. ....++||||++| +|.+...... .+.+...+...+.+++
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 115 (299)
T 2r3i_A 54 SLLKELNH-----------------PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115 (299)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCeeeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHH
Confidence 44333211 01112222222 4566899999986 6655433221 2355555554444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+
T Consensus 116 l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 153 (299)
T 2r3i_A 116 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAF 153 (299)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTT--SCEEECSTTHHHHH
T ss_pred HHHHHHCCccCCCCCHHHeEEcCC--CCEEECcchhhhhc
Confidence 778999999999999999999865 89999999987654
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-12 Score=141.94 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=91.1
Q ss_pred ccccccceeEEEEEEe------CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l------~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|++|.||+|+. .+|+.||||+.+...... .+.+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 79 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ------------------------------------DELD 79 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHH------------------------------------HHHH
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchh------------------------------------hHHH
Confidence 6799999999999984 368899999876432111 0112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh------cCCCHHHH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------FGVNKQKV 270 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l 270 (968)
+.+|+..+.++.+ ..-+.+-.++. ....+|||||++|.+|.++..... ..+....+
T Consensus 80 ~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 142 (327)
T 2yfx_A 80 FLMEALIISKFNH-----------------QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142 (327)
T ss_dssp HHHHHHHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHH
T ss_pred HHHHHHHHhhCCC-----------------CCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHH
Confidence 4456555555421 01112222222 456689999999999988754321 12455555
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCC-CCceEEEeccccccc
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKL 318 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l 318 (968)
...+.+++ +..+|..|++|+|+||.||+++.++ +..++|+|||++..+
T Consensus 143 ~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 55555544 7889999999999999999998542 246999999988644
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.3e-12 Score=150.27 Aligned_cols=146 Identities=16% Similarity=0.149 Sum_probs=94.7
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||+|++|.||+|+.+ +|+.||||+........- .+ . -.+.+|
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~-----------------------~----------~~~~~E 76 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-TD-----------------------K----------ESLLRE 76 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-SC-----------------------H----------HHHHHH
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-hH-----------------------H----------HHHHHH
Confidence 357999999999999985 899999999753211000 00 0 012344
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
++.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 77 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~ 138 (484)
T 3nyv_A 77 VQLLKQLDH-----------------PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSG 138 (484)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 444433311 11122222232 455689999999998866532 223455555555554444
Q ss_pred HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.. .++.++|+|||++..+..
T Consensus 139 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred HHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 788999999999999999999531 347899999999876643
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.7e-12 Score=145.40 Aligned_cols=151 Identities=15% Similarity=0.181 Sum_probs=88.4
Q ss_pred CCccccccccccccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHH
Q 002092 112 ESMGGMFMDFVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (968)
Q Consensus 112 ~~~~~~f~~~d~~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (968)
..+.+.|. +..+.||.|++|.||+|+.+ +++.||||+....-.. .
T Consensus 16 ~~~~~~y~-~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------~-- 63 (405)
T 3rgf_A 16 ERVEDLFE-YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----------------------------M-- 63 (405)
T ss_dssp CCHHHHEE-CSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----------------------------H--
T ss_pred hhhhhhhh-hcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----------------------------H--
Confidence 45667665 44468999999999999975 6889999987532110 0
Q ss_pred HHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHh---
Q 002092 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--- 262 (968)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--- 262 (968)
.+.+|++.+.++++ ..-+.+-.++. ....+|||||++| +|.+......
T Consensus 64 --------~~~~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~ 117 (405)
T 3rgf_A 64 --------SACREIALLRELKH-----------------PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASK 117 (405)
T ss_dssp --------HHHHHHHHHHHCCC-----------------TTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC
T ss_pred --------HHHHHHHHHHhcCC-----------------CCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhcccc
Confidence 12345555554422 01122223332 3445899999987 4433322111
Q ss_pred -----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEec--CCCCceEEEecccccccCH
Q 002092 263 -----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 -----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.+++ +..+|..|++|||+||+|||+.. +.++.++|+|||++..+..
T Consensus 118 ~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 184 (405)
T 3rgf_A 118 ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184 (405)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCC
Confidence 1244444444444444 78899999999999999999942 1248899999999987653
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=6.1e-12 Score=140.74 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=58.6
Q ss_pred CeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCC-CCceEEEecccccc
Q 002092 242 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKK 317 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~ 317 (968)
.+|||||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.++ ++.++|+|||++..
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 589999999999877643211 1355665555555544 7889999999999999999998531 35699999999987
Q ss_pred cCHH
Q 002092 318 LSSS 321 (968)
Q Consensus 318 l~~~ 321 (968)
....
T Consensus 181 ~~~~ 184 (336)
T 3fhr_A 181 TTQN 184 (336)
T ss_dssp C---
T ss_pred cccc
Confidence 7644
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.6e-12 Score=142.29 Aligned_cols=139 Identities=15% Similarity=0.168 Sum_probs=84.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+......... .+ ++.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------~~------~~~~e~ 64 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS------------------------------MD------ELLKEI 64 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC---------------------------------------------------
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchh------------------------------HH------HHHHHH
Confidence 6899999999999996 4799999998653211000 00 122232
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHH-------hcCCCHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-------AFGVNKQKVV 271 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~-------~~~~~~~~l~ 271 (968)
+.+.+++ ++ .|++++ . ....++||||++|.+|.++.... ...++...+.
T Consensus 65 ~~l~~l~------------------h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 124 (303)
T 2vwi_A 65 QAMSQCH------------------HP--NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124 (303)
T ss_dssp -CCCCCC------------------CT--TBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHH
T ss_pred HHHhhcC------------------CC--CEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHH
Confidence 2221111 11 233333 2 45678999999999998775421 1224555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 125 ~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGED--GSVQIADFGVSAFLAT 173 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--CCEEECCCHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCC--CCEEEEeccchheecc
Confidence 5544444 788999999999999999999865 8999999999877654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=4.5e-12 Score=149.58 Aligned_cols=143 Identities=13% Similarity=0.153 Sum_probs=90.9
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 87 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-----------------------------------SNSKLLEEV 87 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-----C-----------------------------------TTHHHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-----------------------------------HHHHHHHHH
Confidence 57999999999999985 899999999864321100 000123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 88 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qi~~~l 149 (494)
T 3lij_A 88 AVLKLLDH-----------------PNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLSGV 149 (494)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 44433311 11122223333 455689999999998876542 334456555555554444 7
Q ss_pred HHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|||+||.|||++.. .++.++|+|||++..+.
T Consensus 150 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp HHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred HHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 88999999999999999999753 13569999999987664
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.26 E-value=6.3e-12 Score=137.06 Aligned_cols=142 Identities=13% Similarity=0.037 Sum_probs=91.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+++.||||+........ .+. . .+.+|+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~--~~~---------------------------~------~~~~e~ 76 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SER---------------------------Q------RFKEEA 76 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH---------------------------H------HHHHHH
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCH--HHH---------------------------H------HHHHHH
Confidence 4799999999999997 478999999876432110 000 0 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.+.... ....+...+...+.++
T Consensus 77 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 138 (290)
T 1t4h_A 77 EMLKGLQH-----------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQI 138 (290)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHHH
Confidence 44333311 00111212221 1225899999999999877532 2345655555544444
Q ss_pred H--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 278 Y--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 278 ~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+ +..+|..| ++|+|+||.||+++.+ ++.++|+|||++....
T Consensus 139 ~~~l~~lH~~~~~i~H~dikp~Nil~~~~-~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 183 (290)
T ss_dssp HHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred HHHHHHHHcCCCCEEECCCCHHHEEEECC-CCCEEEeeCCCccccc
Confidence 4 78899999 9999999999999732 3899999999986543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=9.2e-12 Score=135.63 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=95.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+. -.+.+|+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~--~~~---------------------------------~~~~~e~ 72 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDT---------------------------------STILREV 72 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS--SCH---------------------------------HHHHHHH
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch--HHH---------------------------------HHHHHHH
Confidence 57999999999999985 89999999976432110 000 0123444
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 73 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l 134 (287)
T 2wei_A 73 ELLKKLDH-----------------PNIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGI 134 (287)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CCccEEEEEEeCCCeEEEEEEccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 44444321 01122222222 455689999999988876543 234566666555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCC-CCceEEEecccccccC
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (968)
..+|..|++|+|+||.||+++.++ ++.++|+|||++..+.
T Consensus 135 ~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred HHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 889999999999999999997542 3579999999987654
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.26 E-value=8.4e-12 Score=147.63 Aligned_cols=154 Identities=15% Similarity=0.185 Sum_probs=94.6
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
.+.||.|++|.||+|+.+ +|+.||||+.+...... ...+-. . .++..+ .+.
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~----------------~----~~~~~~------~~~ 94 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK----------------N----IEKFHE------EIY 94 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC------------------------------------CTHH------HHH
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccch----------------h----hHHHHH------HHH
Confidence 368999999999999974 78999999986532110 000000 0 000011 133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 95 ~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~ 156 (504)
T 3q5i_A 95 NEISLLKSLDH-----------------PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANIMKQIL 156 (504)
T ss_dssp HHHHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 45555444321 11122222333 455689999999998876543 334566666655555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCC-CceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.++. ..++|+|||++..+..
T Consensus 157 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 201 (504)
T 3q5i_A 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201 (504)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC
Confidence 78899999999999999999986521 2699999999987654
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-12 Score=144.60 Aligned_cols=156 Identities=17% Similarity=0.155 Sum_probs=95.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+. +|+.||||+.+............ ............ -.+.+|++
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~----------~~~~~~~~~~~~----------~~~~~E~~ 95 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTK----------SNNDKISIKSKY----------DDFKNELQ 95 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECC----------CSSSSCCEEEHH----------HHHHHHHH
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhcc----------ccchhhhHHhHH----------HHHHHHHH
Confidence 6899999999999998 99999999876432211000000 000000000000 12344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCH------HHHH-hcCCCHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDC------ESLE-AFGVNKQKVVEEIT 275 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~------~~~~-~~~~~~~~l~~~l~ 275 (968)
.+.++++ ..-+.+-.++. ....++||||++|.+|.++ .... ...++...+...+.
T Consensus 96 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~ 158 (348)
T 2pml_X 96 IITDIKN-----------------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158 (348)
T ss_dssp HHTTCCC-----------------TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHH
T ss_pred HHHhCCC-----------------CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHH
Confidence 5444321 00111222222 4556899999999999886 2211 23355555555444
Q ss_pred HHH--HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 276 RAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 276 ~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+++ +..+|. .|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 159 qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 203 (348)
T 2pml_X 159 SVLNSFSYIHNEKNICHRDVKPSNILMDKN--GRVKLSDFGESEYMV 203 (348)
T ss_dssp HHHHHHHHHHHTSCEECCCCCGGGEEECTT--SCEEECCCTTCEECB
T ss_pred HHHHHHHHHhccCCEeecCCChHhEEEcCC--CcEEEeccccccccc
Confidence 444 788998 999999999999999865 899999999998754
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.24 E-value=7.4e-12 Score=144.62 Aligned_cols=137 Identities=20% Similarity=0.174 Sum_probs=87.4
Q ss_pred cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.+.||.|++|.||+|+.+ +|+.||||+...+.. .+.+|
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----------------------------------------~~~~E 97 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------------------------------------FKNRE 97 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----------------------------------------SCCHH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----------------------------------------hHHHH
Confidence 468999999999999985 799999998754311 11234
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---c--C--CCeEEecccCCCCCCCHHH-HH--hcCCCHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S--S--ETVLILEFMDGIRLNDCES-LE--AFGVNKQKVV 271 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~--~--~~vLVmE~i~G~~L~~~~~-~~--~~~~~~~~l~ 271 (968)
.+.+.++++ ..-+.+-.++. . . ..+|||||++|. +.+... .. ...++...+.
T Consensus 98 ~~il~~l~h-----------------pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~ 159 (420)
T 1j1b_A 98 LQIMRKLDH-----------------CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVK 159 (420)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHcCC-----------------CCccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHH
Confidence 444443321 11122222222 1 1 136899999873 322211 11 1234444444
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+.+++ +..+|..|++|||+||+|||++.+ .+.++|+|||+++.+.
T Consensus 160 ~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~-~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLV 208 (420)
T ss_dssp HHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHHHCCccccCCChhhEEEeCC-CCeEEeccchhhhhcc
Confidence 4444443 788999999999999999999854 3578999999998764
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=136.03 Aligned_cols=140 Identities=16% Similarity=0.211 Sum_probs=92.9
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|++|.||+|+..+|+.||||+.+......- .. -.+.+|++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~~E~~ 78 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TL---------------------------------DSYRNEIA 78 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHH--HH---------------------------------HHHHHHHH
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccccc--ch---------------------------------HHHHHHHH
Confidence 68999999999999998899999999865321110 00 01345666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++++.. ..|.+++. ....+|||| +.|.+|.++.. ....++...+...+.+++
T Consensus 79 ~l~~l~~~~------------------~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~ 138 (313)
T 3cek_A 79 YLNKLQQHS------------------DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLE 138 (313)
T ss_dssp HHHHHGGGC------------------TTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHH-HCSSCCHHHHHHHHHHHHH
T ss_pred HHHhccccC------------------CceEEEEEEeecCCEEEEEEe-cCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 666665311 11223332 345689999 55667776643 223455555444444443
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|+|+||.||+++ + +.++|+|||++..+...
T Consensus 139 aL~~LH~~~ivH~dlkp~NIl~~-~--~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 139 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEE-T--TEEEECCCSSSCC----
T ss_pred HHHHHHHCCceecCCCcccEEEE-C--CeEEEeeccccccccCc
Confidence 7889999999999999999996 2 78999999999877553
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=6.5e-12 Score=139.64 Aligned_cols=139 Identities=18% Similarity=0.190 Sum_probs=91.8
Q ss_pred cccccccceeEEEEEEeC-CCCEE--EEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 123 ETPLATASIAQVHRATLV-DGRQV--VVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~-~G~~V--AVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
.+.||.|++|.||+|+.+ +|+.| |||+.+....... .-.+.
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~------------------------------------~~~~~ 73 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD------------------------------------HRDFA 73 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHH
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHH------------------------------------HHHHH
Confidence 368999999999999974 67755 8887764321110 01133
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHh-------------
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA------------- 262 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (968)
+|.+.+.++. .++ .|++++ . ....+|||||++|.+|.++.....
T Consensus 74 ~E~~~l~~l~-----------------~hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 134 (327)
T 1fvr_A 74 GELEVLCKLG-----------------HHP--NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134 (327)
T ss_dssp HHHHHHTTCC-----------------CCT--TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTT
T ss_pred HHHHHHHhcc-----------------CCC--chhhhceeeeeCCceEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence 4444443321 011 133333 2 455689999999999887643111
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 135 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~--~~~kL~Dfg~~~~~ 192 (327)
T 1fvr_A 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRGQ 192 (327)
T ss_dssp BSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEESS
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC--CeEEEcccCcCccc
Confidence 1355555555555544 788999999999999999999865 89999999998743
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-11 Score=137.25 Aligned_cols=141 Identities=19% Similarity=0.147 Sum_probs=92.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|++|.||+|+. .+|+.||||+....-.... -.+.+|.
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~e~ 76 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN-------------------------------------RAIIQEV 76 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHH-------------------------------------HHHHHHH
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHH-------------------------------------HHHHHHH
Confidence 6899999999999997 4899999998754321110 0123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---------cCCCeEEecccCCCCCCCHHHH-H-hcCCCHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESL-E-AFGVNKQKVV 271 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~-~-~~~~~~~~l~ 271 (968)
..+.++... ..-+.+-..+. ....++||||++| +|.+.... . ...++...+.
T Consensus 77 ~~l~~l~~h----------------~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~ 139 (337)
T 3ll6_A 77 CFMKKLSGH----------------PNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVL 139 (337)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHH
T ss_pred HHHHHhccC----------------CChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHH
Confidence 555555310 00111211111 1224899999986 55444321 1 1235666655
Q ss_pred HHHHHHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 272 EEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+.+++ +..+|..| ++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 140 ~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~~ 190 (337)
T 3ll6_A 140 KIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ--GTIKLCDFGSATTISH 190 (337)
T ss_dssp HHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT--SCEEBCCCTTCBCCSS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC--CCEEEecCccceeccc
Confidence 5555544 88899999 9999999999999865 8999999999987764
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=7.6e-12 Score=145.16 Aligned_cols=136 Identities=24% Similarity=0.194 Sum_probs=88.0
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.+.||+|++|.||.+...+|+.||||+......+. +.+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~----------------------------------------~~~E~ 59 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI----------------------------------------ALMEI 59 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHH----------------------------------------HHHHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHH----------------------------------------HHHHH
Confidence 46899999999987776789999999876432211 12344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCC-----------H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVN-----------K 267 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~-----------~ 267 (968)
+.+.++.+ ++ .|.+++. ....+|||||++| +|.++.. ..+.. .
T Consensus 60 ~~l~~l~~-----------------Hp--nIv~~~~~~~~~~~~~lv~E~~~g-sL~~~l~--~~~~~~~~~~~~~~~~~ 117 (434)
T 2rio_A 60 KLLTESDD-----------------HP--NVIRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNP 117 (434)
T ss_dssp HHHHHHTT-----------------ST--TBCCEEEEEECSSEEEEEECCCSE-EHHHHHH--TC------------CCH
T ss_pred HHHHhccC-----------------CC--CcCeEEEEEecCCeEEEEEecCCC-CHHHHHh--ccCCCchhhhhccchhH
Confidence 44433311 11 1233332 3445899999976 7766533 11111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceEEecC-----------CCCceEEEecccccccCHH
Q 002092 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD-----------PPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 268 ~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~-----------~~g~i~LiDFG~~~~l~~~ 321 (968)
..++..++.. +..+|..|++|||+||.|||++.+ .++.++|+|||++..+...
T Consensus 118 ~~i~~qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~ 181 (434)
T 2rio_A 118 ISLLRQIASG-VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181 (434)
T ss_dssp HHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred HHHHHHHHHH-HHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCC
Confidence 2234444433 678899999999999999999753 2358999999999987654
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.3e-11 Score=132.86 Aligned_cols=139 Identities=14% Similarity=0.178 Sum_probs=79.3
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......-. .+ +..|.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~----------------------------------~~~~~ 74 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN--KR----------------------------------ILMDL 74 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHH--HH----------------------------------HHHHH
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHH--HH----------------------------------HHHHH
Confidence 68999999999999984 8999999998754221100 00 00111
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.. +...+. ++ .|.+++ . ....+|||||+ |..+..+.......++...+...+.+++
T Consensus 75 ~~---~~~~~~--------------h~--~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 134 (318)
T 2dyl_A 75 DV---VLKSHD--------------CP--YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIV 134 (318)
T ss_dssp HH---HHHTTT--------------CT--TBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HH---HHHhcC--------------CC--ceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 11 111111 11 123333 2 45568999999 4444333322233456555555555544
Q ss_pred --HHHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|. +|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 135 ~~l~~lH~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 135 KALYYLKEKHGVIHRDVKPSNILLDER--GQIKLCDFGISGRLVD 177 (318)
T ss_dssp HHHHHHHHHHCCCCCCCCGGGEEECTT--SCEEECCCTTC-----
T ss_pred HHHHHHHhhCCEEeCCCCHHHEEECCC--CCEEEEECCCchhccC
Confidence 778888 599999999999999865 8999999999877654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-11 Score=134.88 Aligned_cols=142 Identities=13% Similarity=0.151 Sum_probs=87.5
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+......... .+..|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------~~~~e~ 71 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK------------------------------------QLLMDL 71 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHH------------------------------------HHHHHH
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHH------------------------------------HHHHHH
Confidence 67999999999999984 79999999987643211100 011111
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHH----hcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~----~~~~~~~~l~~~l~~ 276 (968)
.. +...+. ++. +.+-.++. ....+|||||++| +|.+..... ...++...+...+.+
T Consensus 72 ~~---~~~~~~--------------h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 133 (327)
T 3aln_A 72 DV---VMRSSD--------------CPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLA 133 (327)
T ss_dssp HH---HHSSCC--------------CTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred HH---HHHcCC--------------CCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHH
Confidence 11 111111 111 22222222 4556899999997 554443211 223445544444444
Q ss_pred HH--HHHHHhc-CccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 277 AY--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 277 ~~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
++ +..+|.. |++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 134 i~~~l~~lH~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 134 TVKALNHLKENLKIIHRDIKPSNILLDRS--GNIKLCDFGISGQLVDS 179 (327)
T ss_dssp HHHHHHHHHHHHSCCCSCCCGGGEEEETT--TEEEECCCSSSCC----
T ss_pred HHHHHHHHhccCCEeECCCCHHHEEEcCC--CCEEEccCCCceecccc
Confidence 33 6788888 99999999999999865 89999999999877543
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-11 Score=137.50 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=52.9
Q ss_pred CeEEecccCCCCCCCHHHH--HhcCCCHHHHHHHHHHHH--HHHHH--hcCccccCCCCCceEEecCCCCceEEEecccc
Q 002092 242 TVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEITRAY--AHQIY--VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~--~~~~~~~~~l~~~l~~~~--l~~i~--~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (968)
.++||||++|..+..+... .........+...+.+++ +..+| ..|++|+|+||+|||++.. ++.++|+|||++
T Consensus 101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~-~~~~kl~Dfg~a 179 (360)
T 3e3p_A 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA-DGTLKLCDFGSA 179 (360)
T ss_dssp EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT-TTEEEECCCTTC
T ss_pred EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC-CCcEEEeeCCCc
Confidence 4789999998432222111 112334444433333333 67788 9999999999999999852 389999999999
Q ss_pred cccCH
Q 002092 316 KKLSS 320 (968)
Q Consensus 316 ~~l~~ 320 (968)
..+..
T Consensus 180 ~~~~~ 184 (360)
T 3e3p_A 180 KKLSP 184 (360)
T ss_dssp BCCCT
T ss_pred eecCC
Confidence 87654
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=140.97 Aligned_cols=138 Identities=21% Similarity=0.192 Sum_probs=87.2
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.+.||.|++|.||+|+..++..||||....... ...+|.
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----------------------------------------~~~~E~ 83 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----------------------------------------FKNREL 83 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----------------------------------------SCCHHH
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----------------------------------------hHHHHH
Confidence 368999999999999997777799987643211 011344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCC------CeEEecccCCCCCCCHHHHH--hcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE------TVLILEFMDGIRLNDCESLE--AFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~------~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~ 273 (968)
+.+..+++ ..-+.+-.++. ... .+|||||++|..+....... ...++...+...
T Consensus 84 ~il~~l~h-----------------~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 146 (394)
T 4e7w_A 84 QIMRIVKH-----------------PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146 (394)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred HHHHhCCC-----------------CCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHH
Confidence 44443321 11122222222 111 46999999985433322111 223444444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++.+.
T Consensus 147 ~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPP-SGVLKLIDFGSAKILI 193 (394)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHCCccCCCCCHHHEEEcCC-CCcEEEeeCCCccccc
Confidence 44433 788999999999999999999832 3899999999998763
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=9.9e-12 Score=144.09 Aligned_cols=136 Identities=18% Similarity=0.239 Sum_probs=85.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||.|++|+|+.....+|+.||||+..+..... +.+|.+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~----------------------------------------~~~E~~ 69 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSF----------------------------------------ADREVQ 69 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTEEE----------------------------------------CHHHHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHH----------------------------------------HHHHHH
Confidence 6899999999765555789999999886543221 223444
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee---e-cCCCeEEecccCCCCCCCHHHHHhcC---CCHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFG---VNKQKVVEEITR 276 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~---~~~~~l~~~l~~ 276 (968)
.+.++. . ++. |.+++ . ....+|||||++| +|.+........ .....++..++.
T Consensus 70 ~l~~l~---~--------------Hpn--Iv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~ 129 (432)
T 3p23_A 70 LLRESD---E--------------HPN--VIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTS 129 (432)
T ss_dssp HHHHSC---C--------------CTT--BCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHH
T ss_pred HHHhcc---C--------------CCC--cCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHH
Confidence 333321 0 111 22222 2 3455899999986 555543211111 123344444444
Q ss_pred HHHHHHHhcCccccCCCCCceEEecC---CCCceEEEecccccccCH
Q 002092 277 AYAHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 320 (968)
. +..+|..|++|||+||+||+++.+ +..+++|+|||+++.+..
T Consensus 130 a-L~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 130 G-LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp H-HHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred H-HHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 3 778899999999999999999632 223578999999988764
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.6e-11 Score=129.14 Aligned_cols=137 Identities=16% Similarity=0.104 Sum_probs=90.0
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
.+.||+|++|.||+|+. +|+.||||+.+......- ..+ .|.+|+
T Consensus 15 ~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~-----------------------------~~~------~~~~E~ 58 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTR-----------------------------KSR------DFNEEC 58 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHH-----------------------------HHH------HHHHHG
T ss_pred HHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHH-----------------------------HHH------HHHHHH
Confidence 36899999999999998 489999999875321100 000 122233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----c--CCCeEEecccCCCCCCCHHHHHhc-CCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S--SETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~--~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~ 275 (968)
+.+.+++ ++ .|.+++. . ...++||||++|.+|.++...... .++...+...+.
T Consensus 59 ~~l~~l~------------------h~--~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 118 (271)
T 3kmu_A 59 PRLRIFS------------------HP--NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118 (271)
T ss_dssp GGGCCCS------------------CT--TEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHH
T ss_pred HHHHhcC------------------CC--chhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHH
Confidence 2222211 11 2333332 2 445899999999999876432111 256666666555
Q ss_pred HHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccc
Q 002092 276 RAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (968)
Q Consensus 276 ~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (968)
+++ +..+|..| ++|+|+||.||+++.+ +.++|.|||+...
T Consensus 119 qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~--~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 119 DMARGMAFLHTLEPLIPRHALNSRSVMIDED--MTARISMADVKFS 162 (271)
T ss_dssp HHHHHHHHHTTSSSCCTTCCCSGGGEEECTT--SCEEEEGGGSCCT
T ss_pred HHHHHHHHHhcCCCceecCCCccceEEEcCC--cceeEEeccceee
Confidence 554 78889999 9999999999999865 7888888887544
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.15 E-value=6e-11 Score=133.99 Aligned_cols=78 Identities=17% Similarity=0.125 Sum_probs=56.9
Q ss_pred CCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--HHHHHhc-CccccCCCCCceEEecC----CCCceEEEec
Q 002092 241 ETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVD-GFFNGDPHPGNFLVSKD----PPHRPILLDF 312 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~----~~g~i~LiDF 312 (968)
..++||||+ |.+|.+..... ..+++...+...+.+++ +..+|.. |++|+|+||+|||++.+ ..+.++|+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Df 182 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccc
Confidence 458999999 77777664321 23356655555555544 7889998 99999999999999642 1247999999
Q ss_pred ccccccC
Q 002092 313 GLTKKLS 319 (968)
Q Consensus 313 G~~~~l~ 319 (968)
|++..+.
T Consensus 183 g~a~~~~ 189 (373)
T 1q8y_A 183 GNACWYD 189 (373)
T ss_dssp TTCEETT
T ss_pred ccccccC
Confidence 9987664
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=124.77 Aligned_cols=90 Identities=17% Similarity=0.122 Sum_probs=62.6
Q ss_pred hhhCCCcccccccccccccc-ccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHH
Q 002092 108 REFGESMGGMFMDFVETPLA-TASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (968)
Q Consensus 108 ~elg~~~~~~f~~~d~~plg-saSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (968)
.++...+.+.+..++-++++ .|+.++||++...+|+.++||+.++...
T Consensus 9 ~~~p~~l~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~------------------------------- 57 (264)
T 1nd4_A 9 AGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL------------------------------- 57 (264)
T ss_dssp -CCCGGGTTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT-------------------------------
T ss_pred ccCCHHHHHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc-------------------------------
Confidence 34444455555666667886 6667999999877889999998765311
Q ss_pred HHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCC
Q 002092 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 255 (968)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~ 255 (968)
-++..|++.+..+++. ++.||+++. .+..++||||++|.++.
T Consensus 58 ---------~~~~~E~~~l~~l~~~------------------~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 58 ---------NELQDEAARLSWLATT------------------GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ---------SCHHHHHHHHHHHHTT------------------TCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ---------hhhhHHHHHHHHHHhC------------------CCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 1345677777776541 466888875 23459999999999985
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-11 Score=136.74 Aligned_cols=77 Identities=14% Similarity=0.190 Sum_probs=55.9
Q ss_pred cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEeccccc
Q 002092 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (968)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (968)
....++||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++ + +.++|+|||++.
T Consensus 101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~--~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-N--GKVVITDFGLFS 177 (319)
T ss_dssp SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC
T ss_pred CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-C--CCEEEeecCCcc
Confidence 4556899999999988776432222345555555444444 7889999999999999999997 3 789999999986
Q ss_pred cc
Q 002092 317 KL 318 (968)
Q Consensus 317 ~l 318 (968)
..
T Consensus 178 ~~ 179 (319)
T 2y4i_B 178 IS 179 (319)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >2cc1_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, broad-spectrum; 2.13A {Mycobacterium fortuitum} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=4.3e-10 Score=120.91 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=89.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|+.|++||++|.||++++++++++|+|+||++|. +|.++++.| +|+.... +....+.
T Consensus 34 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~-------------~~~~~~~~~-~~~~~~~-------~~~~~t~ 92 (262)
T 2cc1_A 34 RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVF-------------VDADALVPN-SPVTEAR-------AGAEMTL 92 (262)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE-------------CCGGGCCSS-CHHHHTT-------TTSEEEH
T ss_pred cCCCeeeehHHHHHHHHHHHHHHHHcCCCCCCceEE-------------cCHHHccCC-CcccccC-------CCCCcCH
Confidence 568999999999999999999999999999999987 344555555 3332211 1123556
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCCC-HHHHHHHHchhccCCCCCCCcccccccCccccccccc
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKK-FQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSG 684 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~-~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~ 684 (968)
++++..+.. || .|.. ...++|+++|.. +.++ +++|||+++.... ....
T Consensus 93 ~~ll~~~~~------------~S-~N~a--~~~l~~~vgG~~~~~~~-----~~~lG~~~t~~~~-----~~~~------ 141 (262)
T 2cc1_A 93 AELCQAALQ------------RS-DNTA--ANLLLKTIGGPAAVTAF-----ARSVGDERTRLDR-----WEVE------ 141 (262)
T ss_dssp HHHHHHHHH------------SC-CHHH--HHHHHHHHTHHHHHHHH-----HHHTTCCSCCCCS-----CTTG------
T ss_pred HHHHHHHHH------------hC-CHHH--HHHHHHHhCChHHHHHH-----HHHcCCCceeecC-----cchh------
Confidence 676665432 22 1332 466788888753 4444 6689999531100 0000
Q ss_pred CCCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 685 INNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
.+ ....+..+.++|+.||++|+++++++..++..
T Consensus 142 ----------------------------~~-----~~~~g~~~~~~T~~dla~~~~~l~~~~~ls~~ 175 (262)
T 2cc1_A 142 ----------------------------LN-----SAIPGDPRDTSTPAALAVGYRAILAGDALSPP 175 (262)
T ss_dssp ----------------------------GG-----GCCTTCCTTEECHHHHHHHHHHHHHSSSSCHH
T ss_pred ----------------------------hc-----ccCCCCccCccCHHHHHHHHHHHHcCCCCCHH
Confidence 00 00012235589999999999999998765543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=2.7e-11 Score=146.17 Aligned_cols=144 Identities=18% Similarity=0.194 Sum_probs=93.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++....... -.+.+|+
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~------------------------------------~~~~~Ei 63 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR------------------------------------ERWCLEI 63 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHH------------------------------------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHH------------------------------------HHHHHHH
Confidence 6899999999999997 47999999988764321100 0134455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeee------e-cCCCeEEecccCCCCCCCHHHHHhc--CCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI------Q-SSETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~------~-~~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~ 273 (968)
+.+.++.+. .-+.+-.++ . ....+|||||++|.+|.++...... +++...+...
T Consensus 64 ~iL~~L~Hp-----------------nIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I 126 (676)
T 3qa8_A 64 QIMKKLNHP-----------------NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126 (676)
T ss_dssp HHHHHCCBT-----------------TBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHH
T ss_pred HHHHhCCCC-----------------CCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHH
Confidence 555554220 011111111 1 3445899999999998876432111 2443344444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCC-CceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|+|+||+||+++.++. ..++|+|||++..+..
T Consensus 127 ~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~ 176 (676)
T 3qa8_A 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176 (676)
T ss_dssp HHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred HHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence 43333 78899999999999999999986521 2388999999987643
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.09 E-value=5.4e-11 Score=137.03 Aligned_cols=76 Identities=8% Similarity=0.075 Sum_probs=50.1
Q ss_pred CeEEecccCCCCCCCHHHHH-h-cC----CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecc
Q 002092 242 TVLILEFMDGIRLNDCESLE-A-FG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-~-~~----~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
.+++|++.. .+|.++.... . .. ++.......+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||
T Consensus 180 ~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~--~~~kL~DFG 256 (413)
T 3dzo_A 180 RFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR--GGVFLTGFE 256 (413)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCGG
T ss_pred eEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecC--CeEEEEecc
Confidence 467777664 5666554211 0 01 11122222223333 788899999999999999999966 889999999
Q ss_pred cccccCH
Q 002092 314 LTKKLSS 320 (968)
Q Consensus 314 ~~~~l~~ 320 (968)
+++....
T Consensus 257 ~a~~~~~ 263 (413)
T 3dzo_A 257 HLVRDGA 263 (413)
T ss_dssp GCEETTE
T ss_pred ceeecCC
Confidence 9887544
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-09 Score=116.55 Aligned_cols=132 Identities=16% Similarity=0.200 Sum_probs=88.2
Q ss_pred cccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHH
Q 002092 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (968)
Q Consensus 125 plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (968)
..+.+|.++||++.. +|+.++||+.+++... ...++.+|++.
T Consensus 21 ~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~-------------------------------------~~~~~~~E~~~ 62 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG-------------------------------------TTYDVEREKDM 62 (263)
T ss_dssp CCSCCSSSEEEEEEC-SSCEEEEEEECGGGTT-------------------------------------STTCHHHHHHH
T ss_pred eccCCCCCeEEEEEC-CCCcEEEEeCCcccCC-------------------------------------CHHHHHHHHHH
Confidence 457788899999985 4789999998754211 01145678877
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHH
Q 002092 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (968)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (968)
++.+++ .+.||+++. .+..++||||++|.++.+... ...+...++..+.+. +.
T Consensus 63 l~~l~~-------------------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~---~~~~~~~~~~~l~~~-l~ 119 (263)
T 3tm0_A 63 MLWLEG-------------------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE---DEQSPEKIIELYAEC-IR 119 (263)
T ss_dssp HHHHTT-------------------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC---TTTCHHHHHHHHHHH-HH
T ss_pred HHHHhc-------------------CCCCCeEEEEEecCCceEEEEEecCCeehhhccC---CcccHHHHHHHHHHH-HH
Confidence 777642 356888874 345689999999988754310 012233444444433 33
Q ss_pred HHHh-----------------------------------------------------------cCccccCCCCCceEEec
Q 002092 281 QIYV-----------------------------------------------------------DGFFNGDPHPGNFLVSK 301 (968)
Q Consensus 281 ~i~~-----------------------------------------------------------~G~~H~D~hPgNIlv~~ 301 (968)
.+|. .+++|+|+||+|||+++
T Consensus 120 ~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~ 199 (263)
T 3tm0_A 120 LFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD 199 (263)
T ss_dssp HHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET
T ss_pred HHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC
Confidence 3443 56899999999999974
Q ss_pred CCCCce-EEEecccccccCH
Q 002092 302 DPPHRP-ILLDFGLTKKLSS 320 (968)
Q Consensus 302 ~~~g~i-~LiDFG~~~~l~~ 320 (968)
+++ .||||+.+..-++
T Consensus 200 ---~~~~~lIDwe~a~~gd~ 216 (263)
T 3tm0_A 200 ---GKVSGFIDLGRSGRADK 216 (263)
T ss_dssp ---TEEEEECCCTTCEEEEH
T ss_pred ---CcEEEEEEchhcccCCH
Confidence 455 5999999876554
|
| >2j9o_A TLL2115 protein; penicillin-binding protein, hydrolase, lactamase, thioestera DD-peptidase; 1.50A {Synechococcus elongatus} PDB: 2jbf_A* 2j7v_A 2j8y_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=3.3e-08 Score=108.51 Aligned_cols=37 Identities=27% Similarity=0.325 Sum_probs=34.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ 562 (968)
++++.|..||++|.||++++++++++|++++|++|..
T Consensus 52 ~~~~~~~paS~~K~~ta~a~l~~~e~G~l~l~~~v~~ 88 (298)
T 2j9o_A 52 GGDQVFPAASTIKFPILVAFFKAVDEGRVTLQERLTM 88 (298)
T ss_dssp BTTSCEECGGGGHHHHHHHHHHHHHTTSSCSSCEEEC
T ss_pred CCCCeEecHhHHHHHHHHHHHHHHHcCCCCccceEEc
Confidence 4578999999999999999999999999999999863
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.3e-08 Score=114.70 Aligned_cols=163 Identities=13% Similarity=0.197 Sum_probs=100.1
Q ss_pred CCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEec--CChhhhhHhhHHHHHHHHHH
Q 002092 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQH--QGIKTIILEDLKNAKSIVDW 171 (968)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~--p~i~~~~~~Dl~~l~~l~~~ 171 (968)
...++.+.+.+.+.+.++.. .. ..+-++++.|..+.||+.+.. +..+++|+.+ ++....
T Consensus 18 ~~~ld~~~l~~~l~~~~~~~-~~---~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~-------------- 78 (359)
T 3dxp_A 18 QQRFDTEALEAWMRQHVEGF-AG---PLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLP-------------- 78 (359)
T ss_dssp --CCCHHHHHHHHHHHSTTC-CC---CCEEEECCC-CCSCEEEEECS-SCEEEEECCCC---------------------
T ss_pred ccCCCHHHHHHHHHHhCCCC-CC---CceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCC--------------
Confidence 34568888889888887531 11 234578999999999999864 5789999876 542100
Q ss_pred HHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--c-----CCCeE
Q 002092 172 IAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S-----SETVL 244 (968)
Q Consensus 172 ~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~-----~~~vL 244 (968)
..-++.+|++.+..+++ ..+.||+++. . +..++
T Consensus 79 ----------------------~~~~~~~E~~~l~~L~~------------------~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 79 ----------------------SAHAIEREYRVMDALAG------------------TDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp -------------------------CHHHHHHHHHHHTT------------------SSSCCCCEEEEECCTTTTSSCEE
T ss_pred ----------------------cHHHHHHHHHHHHHhhc------------------CCCCCCcEEEECCCCCccCCeEE
Confidence 11245667777776643 2467898885 2 23689
Q ss_pred EecccCCCCCCCHHHHHhcCCC---HHHHHHHHHHHHHHHHH--------------------------------------
Q 002092 245 ILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYAHQIY-------------------------------------- 283 (968)
Q Consensus 245 VmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l~~i~-------------------------------------- 283 (968)
||||++|..+.+... ...+ ...+...+.+. +..+|
T Consensus 119 vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~-La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 119 IMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRV-IAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHH-HHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHH-HHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999999998864100 0011 11122222222 11222
Q ss_pred --------------------hcCccccCCCCCceEEecCCCCc-eEEEecccccccCH
Q 002092 284 --------------------VDGFFNGDPHPGNFLVSKDPPHR-PILLDFGLTKKLSS 320 (968)
Q Consensus 284 --------------------~~G~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~l~~ 320 (968)
..+++|+|+||+|||++.++ .+ +.||||+.+..-++
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~g~p 251 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTLGHP 251 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEEECH
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECccccccCCH
Confidence 14799999999999998652 24 57999999886554
|
| >1bsg_A Beta lactamase, penicillinase; hydrolase, antibiotic resistance; 1.85A {Streptomyces albus} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-07 Score=101.77 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=91.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcC-cCCCCCCCCCCcCCCCcCCCC
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH-TSGLHNVSVDLSSENPLLICD 604 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsH-tSGl~~~~~~~~~~~~~~~~~ 604 (968)
++|+.|++||++|.+|++++++++++|+|+||++|. ++-.+++.| .||+..... .+....+
T Consensus 34 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~-------------~~~~~~~~~~~s~~~~~~~-----~~~~~~t 95 (266)
T 1bsg_A 34 RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRIL-------------YTQDDVEQADGAPETGKPQ-----NLANGMT 95 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEEC-------------CCHHHHHHHTCCTTTTSHH-----HHHHCEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCcCceEE-------------eCHHHccCCCCCchhhhcc-----CCCCCcC
Confidence 568899999999999999999999999999999986 345566666 666654210 0011345
Q ss_pred HHHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCC-CHHHHHHHHchhccCCCCCCCcccccccCcccccccc
Q 002092 605 WDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGK-KFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVS 683 (968)
Q Consensus 605 ~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~-~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~ 683 (968)
.++++..+.. ||+ |. ....++|++.|. .+.++ +++|||+++... .+...
T Consensus 96 l~~ll~~~i~------------~S~-N~--aa~~L~~~vgG~~~~~~~-----~~~lG~~~t~~~-----~~~~~----- 145 (266)
T 1bsg_A 96 VEELCEVSIT------------ASD-NC--AANLMLRELGGPAAVTRF-----VRSLGDRVTRLD-----RWEPE----- 145 (266)
T ss_dssp HHHHHHHHHH------------SCC-HH--HHHHHHHHHTSTHHHHHH-----HHHTTCSSCCCC-----SCTTG-----
T ss_pred HHHHHHHHHH------------hCc-HH--HHHHHHHHhcCHHHHHHH-----HHHcCCCceEec-----CCchh-----
Confidence 5666665432 332 22 246788888874 34443 567999953110 00000
Q ss_pred cCCCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCC
Q 002092 684 GINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750 (968)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~ 750 (968)
.+ ....+.++.++|+.||++++++++++..++.
T Consensus 146 -----------------------------~~-----~~~~~~~~~~~Ta~dla~~~~~l~~~~~l~~ 178 (266)
T 1bsg_A 146 -----------------------------LN-----SAEPGRVTDTTSPRAITRTYGRLVLGDALNP 178 (266)
T ss_dssp -----------------------------GG-----CCCTTCCTTEECHHHHHHHHHHHHTSSSSCH
T ss_pred -----------------------------hc-----cccCCCCCCccCHHHHHHHHHHHHcCCCCCH
Confidence 00 0011234568999999999999998765544
|
| >1hzo_A Beta-lactamase; mixed alpha/beta, cephalosporinase, hydrolase; HET: MES; 1.75A {Proteus vulgaris} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.8e-07 Score=101.02 Aligned_cols=141 Identities=15% Similarity=0.091 Sum_probs=86.0
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|..|++||++|++|++++++++++|+++||++|.- +-++++. .||+.... +....+.
T Consensus 37 n~~~~~~~aS~~K~~ta~~~l~~v~~G~l~ld~~v~~-------------~~~~~~~-~s~~~~~~-------~~~~~t~ 95 (271)
T 1hzo_A 37 RGEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITI-------------KKSDLVA-YSPITEKH-------LTTGMTL 95 (271)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHHSTTGGGCEECC-------------CGGGCCS-CCTTGGGC-------TTTCEEH
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHhCCCCCCCceEEe-------------CHHHccC-CChhhhhC-------CCCCcCH
Confidence 5688999999999999999999999999999999862 1111221 23332211 1123456
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhC-CCHHHHHHHHchhccCCCCCCCcccccccCccccccccc
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG-KKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSG 684 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG-~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~ 684 (968)
++++..+... | .|.+ ...++|++.| ..+.++ +++|||+++... ....
T Consensus 96 ~~ll~~~i~~------------S-~N~a--a~~L~~~~gG~~~~~~~-----~~~lG~~~t~~~-----~~~~------- 143 (271)
T 1hzo_A 96 AELSAATLQY------------S-DNTA--MNKILDYLGGPAKVTQF-----ARSINDVTYRLD-----RKEP------- 143 (271)
T ss_dssp HHHHHHHHHT------------C-CHHH--HHHHHHHHTSHHHHHHH-----HHHTTCSSCCCC-----CCTT-------
T ss_pred HHHHHHHHHc------------C-CHHH--HHHHHHHhCCHHHHHHH-----HHHcCCCceeeC-----CCCh-------
Confidence 6766654332 2 2332 4567888887 334433 468999953210 0000
Q ss_pred CCCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 685 INNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
. .+ ....+...-++|+.||++++++++++..++..
T Consensus 144 -----~----------------------~~-----~~~~~~~~~~~T~~dla~~~~~l~~~~~l~~~ 178 (271)
T 1hzo_A 144 -----E----------------------LN-----TAIHGDPRDTTSPIAMAKSLQALTLGDALGQS 178 (271)
T ss_dssp -----G----------------------GG-----CCCTTCCTTEECHHHHHHHHHHHHTSSSSCHH
T ss_pred -----h----------------------hc-----cCCCCCCCCccCHHHHHHHHHHHHcCCCCCHH
Confidence 0 00 00012234589999999999999988765543
|
| >2qpn_A Beta-lactamase GES-1; APO-enzyme, plasmid, hydrolase; 1.10A {Klebsiella pneumoniae} PDB: 3nia_A* 3ni9_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.9e-08 Score=107.23 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=34.0
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|+.||++|.+|++++++++++|+++||++|.
T Consensus 55 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~ 90 (287)
T 2qpn_A 55 RMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLS 90 (287)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCCCceEE
Confidence 568899999999999999999999999999999986
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.66 E-value=6.7e-08 Score=105.30 Aligned_cols=97 Identities=16% Similarity=0.227 Sum_probs=73.9
Q ss_pred HHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCC
Q 002092 100 QEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (968)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (968)
+.|.+.+.+.+|.++..+ +++|.|..++||+.++.||++|+||+..++....
T Consensus 3 ~~v~a~~~~l~G~~v~~v------~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---------------------- 54 (288)
T 3f7w_A 3 NSVAARVTELTGREVAAV------AERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---------------------- 54 (288)
T ss_dssp HHHHHHHHHHHCCCEEEE------EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC----------------------
T ss_pred HHHHHHHHHhcCCCeEEE------EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch----------------------
Confidence 567788888899877655 7899999999999999999999999866542110
Q ss_pred CCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCC
Q 002092 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 256 (968)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (968)
.-.|..|++.++.+++ ...+.||+++..+..++||||+++.....
T Consensus 55 ---------------~~~~~~Ea~~L~~L~~-----------------~~~vpvP~v~~~~~~~lv~e~l~~~~~~~ 99 (288)
T 3f7w_A 55 ---------------DGLFRAEALGLDWLGR-----------------SFGSPVPQVAGWDDRTLAMEWVDERPPTP 99 (288)
T ss_dssp ---------------TTHHHHHHHHHHHHTC-----------------STTCCSCCEEEEETTEEEEECCCCCCCCH
T ss_pred ---------------hhHHHHHHHHHHHHHh-----------------hCCCCcceEEeccCceEEEEeecccCCCh
Confidence 0014567877777643 23588999998777899999999887654
|
| >1g6a_A Beta-lactamase PSE-4; class A beta-lactamase, carbenicillinase, R234K mutant, hydrolase; 1.75A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1g68_A | Back alignment and structure |
|---|
Probab=98.62 E-value=4.5e-07 Score=97.73 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|+.||++|.+|++++++++++|+++||++|.
T Consensus 39 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~ 74 (271)
T 1g6a_A 39 NGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVE 74 (271)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHCCCCCccceEE
Confidence 567899999999999999999999999999999986
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1e-07 Score=102.43 Aligned_cols=61 Identities=16% Similarity=0.117 Sum_probs=37.5
Q ss_pred CccccCCCCCceEEecCCCCceEEEecccccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHcCc
Q 002092 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGL 350 (968)
Q Consensus 286 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~ 350 (968)
.++|+|+||+|||++++ +.+.||||+.+..-++.. .++.++..+.....+.....+...|.
T Consensus 194 ~l~HGDl~~~Nil~~~~--~~~~viDwe~a~~gdp~~--Dla~~~~~~~~~~~~~~~~fl~~Yg~ 254 (272)
T 4gkh_A 194 VVTHGDFSLDNLIFDEG--KLIGCIDVGRVGIADRYQ--DLAILWNCLGEFSPSLQKRLFQKYGI 254 (272)
T ss_dssp EEECSCCCTTSEEEETT--EEEEECCCTTCEEEETHH--HHHHHHHHHTTTCHHHHHHHHHHHTC
T ss_pred EEEcCCCCCCeEEEECC--eEEEEEECcccccCCHHH--HHHHHHHHhhhcCHHHHHHHHHHcCC
Confidence 48999999999999843 445699999988655432 23333333333334433444444454
|
| >2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ... | Back alignment and structure |
|---|
Probab=98.61 E-value=4.8e-07 Score=97.01 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=33.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|+.||++|++|++++++++++|+++||++|.
T Consensus 36 ~~~~~~~~aS~~K~~ta~~~l~~~~~g~~~l~~~v~ 71 (263)
T 2p74_A 36 RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVE 71 (263)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTGGGCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHcCCCCcCCeEE
Confidence 457899999999999999999999999999999986
|
| >1o7e_A L2 beta lactamase; hydrolase, class A; 1.51A {Stenotrophomonas maltophilia} SCOP: e.3.1.1 PDB: 1n4o_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.4e-07 Score=100.34 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|+.||++|.+|++++++++++|+|+||++|.
T Consensus 47 n~~~~~~~aS~~K~~ta~~~l~~~~~G~l~l~~~v~ 82 (276)
T 1o7e_A 47 RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVP 82 (276)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 467899999999999999999999999999999986
|
| >1bue_A Protein (imipenem-hydrolysing beta-lactamase); hydrolase, antibiotic resistance, class A carbapenemase; 1.64A {Enterobacter cloacae} SCOP: e.3.1.1 PDB: 1bul_A* 1dy6_A | Back alignment and structure |
|---|
Probab=98.57 E-value=5.3e-07 Score=96.96 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=34.0
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|++||++|.+|++++++++++|+++||++|.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~g~l~ld~~v~ 70 (265)
T 1bue_A 35 RANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVN 70 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhcCCCCcCceEE
Confidence 567899999999999999999999999999999987
|
| >1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ... | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-06 Score=93.85 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|+.||++|.+|++++++++++|+++||++|.
T Consensus 36 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~~~l~~~v~ 71 (263)
T 1m40_A 36 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 71 (263)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhCCCCCCCceEE
Confidence 567899999999999999999999999999999986
|
| >3c5a_A Class A carbapenemase KPC-2; beta-lactamase, C-terminal deleted mutant, plasmid, hydrolase; HET: CIT; 1.23A {Escherichia coli} PDB: 3rxw_A* 3rxx_A* 2ods_A 2ov5_A* 3e2k_A 3e2l_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=5.5e-07 Score=96.62 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|+.||++|.+|++++++++++|+++||++|.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~ 70 (264)
T 3c5a_A 35 RAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIR 70 (264)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTSTTCEEC
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHCCCCCCCcEEE
Confidence 457899999999999999999999999999999986
|
| >1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=8.3e-07 Score=96.30 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=34.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ 562 (968)
++|+.|+.||++|.+|++++++++++|+|+||++|.-
T Consensus 36 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~~ 72 (282)
T 1e25_A 36 NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIV 72 (282)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCCCCeEEe
Confidence 6688999999999999999999999999999999863
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.1e-07 Score=102.18 Aligned_cols=96 Identities=14% Similarity=0.160 Sum_probs=63.4
Q ss_pred CCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHh
Q 002092 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA 175 (968)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~ 175 (968)
.++.+.+++.|.+.+.. +. ...-++++.|....||+.. +.++||+.+++.. .
T Consensus 3 ~~~~~~l~~~l~~~~p~-~~----~~~i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~---~---------------- 54 (304)
T 3sg8_A 3 TYTFDQVEKAIEQLYPD-FT----INTIEISGEGNDCIAYEIN----RDFIFKFPKHSRG---S---------------- 54 (304)
T ss_dssp CCCHHHHHHHHHHHCTT-CC----CCCCCEEEECSSEEEEEST----TSEEEEEESSHHH---H----------------
T ss_pred cCCHHHHHHHHHHhCCC-cc----ceeeEecCCCCcceEEEEC----CEEEEEecCCcch---H----------------
Confidence 45677888888887743 11 1233579999999999864 5799998654300 0
Q ss_pred CCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec---C----CCeEEecc
Q 002092 176 EPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---S----ETVLILEF 248 (968)
Q Consensus 176 ~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~----~~vLVmE~ 248 (968)
.++.+|++.+..+.. ...+.||+++.. . ..++||||
T Consensus 55 --------------------~~~~~E~~~l~~l~~-----------------~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 55 --------------------TNLFNEVNILKRIHN-----------------KLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp --------------------HHHHHHHHHHHHHTT-----------------SSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred --------------------HHHHHHHHHHHHHHh-----------------cCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 013456666666543 124678888751 1 24789999
Q ss_pred cCCCCCCC
Q 002092 249 MDGIRLND 256 (968)
Q Consensus 249 i~G~~L~~ 256 (968)
++|.++.+
T Consensus 98 i~G~~l~~ 105 (304)
T 3sg8_A 98 IKGVPLTP 105 (304)
T ss_dssp CCCEECCH
T ss_pred cCCeECCc
Confidence 99999975
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.45 E-value=7.4e-07 Score=98.24 Aligned_cols=97 Identities=16% Similarity=0.288 Sum_probs=70.3
Q ss_pred CHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCC
Q 002092 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP 177 (968)
Q Consensus 98 ~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~ 177 (968)
.++.+.+.|.+.+|.+. .-.+.+||+.|.+.++|+.+. +++.++||+..++-..
T Consensus 20 ~~~~l~~~L~~~lg~~~----~i~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~--------------------- 73 (312)
T 3jr1_A 20 MWKSISQVLAEQFGAYY----FIKHKEKLYSGEMNEIWLIND-EVQTVFVKINERSYRS--------------------- 73 (312)
T ss_dssp HHHHHHHHHHHHHSSCC----CCCEEEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHH---------------------
T ss_pred cHHHHHHHHHHHhCCCc----ceeeeEEeCCccceeeeEEEE-CCCeEEEEeCCcccHH---------------------
Confidence 45678888889998641 122347899999999999986 6789999987653111
Q ss_pred CCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCC
Q 002092 178 QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIR 253 (968)
Q Consensus 178 ~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~ 253 (968)
.|..|++.++.++.. ..+.||+|+. .+..++||||++|.+
T Consensus 74 -------------------~~~~E~~~L~~L~~~-----------------~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 74 -------------------MFRAEADQLALLAKT-----------------NSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp -------------------HHHHHHHHHHHHHHT-----------------TSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred -------------------HHHHHHHHHHHHHhh-----------------CCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 134577777777652 2478999985 345799999999998
Q ss_pred CCC
Q 002092 254 LND 256 (968)
Q Consensus 254 L~~ 256 (968)
+..
T Consensus 118 ~~~ 120 (312)
T 3jr1_A 118 NKQ 120 (312)
T ss_dssp CCT
T ss_pred CCc
Confidence 753
|
| >1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase, detergent binding, drug design, radiation damage; HET: MA4 EPE; 0.90A {Klebsiella pneumoniae} SCOP: e.3.1.1 PDB: 3d4f_A* 2zd8_A* 1q2p_A* 1shv_A* 1vm1_A* 2g2u_A 2h5s_A* 1ong_A* 3c4o_A 3c4p_A 3mke_A* 3mkf_A* 3mxr_A* 3mxs_A* 3n4i_A 2a3u_A* 3opr_A* 3opl_A* 3oph_A* 3opp_A* ... | Back alignment and structure |
|---|
Probab=98.43 E-value=1.4e-06 Score=93.61 Aligned_cols=67 Identities=21% Similarity=0.224 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--EcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCC
Q 002092 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (968)
Q Consensus 477 ~l~~~l~~~l~~~~~~~~~~G~~v~V~--~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l 554 (968)
++.+.+++.+++.- ..+ ++.|+ ..|++++. .++|+.|+.||++|++|++++++++++|++
T Consensus 3 ~l~~~l~~~~~~~~----~~~-~v~v~d~~tg~~l~~-------------~~~~~~~~~aS~~K~~~a~~~l~~~~~G~l 64 (265)
T 1n9b_A 3 QPLEQIKLSESQLS----GRV-GMIEMDLASGRTLTA-------------WRADERFPMMSTFKVVLCGAVLARVDAGDE 64 (265)
T ss_dssp CHHHHHHHHHHHHT----SEE-EEEEEETTTCCEEEE-------------ESTTSCEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhcC----CcE-EEEEEECCCCcEeee-------------eCCCCeeecHHHHHHHHHHHHHHHHHCCCC
Confidence 45566666665532 222 23444 35666541 156789999999999999999999999999
Q ss_pred CccCchh
Q 002092 555 KLEENIA 561 (968)
Q Consensus 555 ~Ld~pv~ 561 (968)
+||++|.
T Consensus 65 ~l~~~v~ 71 (265)
T 1n9b_A 65 QLERKIH 71 (265)
T ss_dssp CTTCEEC
T ss_pred CCCCeEE
Confidence 9999986
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2e-06 Score=97.99 Aligned_cols=58 Identities=7% Similarity=-0.016 Sum_probs=37.9
Q ss_pred CCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCCh
Q 002092 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGI 154 (968)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i 154 (968)
.-+++.+.+...+. .+|.-... ..++.+++|.|+.+.||+++.. +|+.|+||...|..
T Consensus 9 ~~~l~~~~v~~~l~-~~~~~~~~--~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~ 67 (397)
T 2olc_A 9 YETLNESSAVALAV-KLGLFPSK--STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYA 67 (397)
T ss_dssp CCCCCHHHHHHHHH-HTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-
T ss_pred cccCCHHHHHHHHH-hcCcCCCC--CceEEEECCCCceEEEEEEEECCCCcEEEEEecchhh
Confidence 34567777877777 55521110 1245579999999999999864 57899999987754
|
| >2wk0_A Beta-lactamase; hydrolase, iodopenicillanate, antibiotic resistance; HET: BIY CIT; 1.65A {Bacillus licheniformis} PDB: 2x71_A* 3b3x_A* 1i2s_A* 1i2w_A* 2y91_A* 2blm_A 4blm_A 3sh9_A* 3sh7_A* 3sh8_A* 3ly3_A 3kgo_A* 3ly4_A* 3kgm_A* 3kgn_A* 3m2j_A* 3m2k_A* 3soi_A* 1mbl_A | Back alignment and structure |
|---|
Probab=98.41 E-value=5.5e-07 Score=96.83 Aligned_cols=97 Identities=18% Similarity=0.166 Sum_probs=61.1
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|..|+.||++|.+|++++++++++| +||++|. ++.++++.| ||+.... +....+.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~g--~l~~~v~-------------~~~~~~~~~-~~~~~~~-------~~~~~t~ 91 (265)
T 2wk0_A 35 RPDERFAFASTIKALTVGVLLQQKSIE--DLNQRIT-------------YTRDDLVNY-NPITEKH-------VDTGMTL 91 (265)
T ss_dssp STTCEEECGGGHHHHHHHHHHHHCCTG--GGGCEEC-------------CCTTTCCSC-CTTGGGC-------TTTCEEH
T ss_pred CCCCceecHHHHHHHHHHHHHHHHhCC--CCCCeEE-------------eCHHHccCC-CcccccC-------CCCCccH
Confidence 568899999999999999999999999 9998875 122223334 3433211 1123556
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCC
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDG 664 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~ 664 (968)
++++..+.. || .|. ....+++++.| .+-+++ .+++|||++
T Consensus 92 ~~ll~~~i~------------~S-~N~--aa~~L~~~lgG---~~~~~~-~~~~lG~~~ 131 (265)
T 2wk0_A 92 KELADASLR------------YS-DNT--AQNLILKQIGG---PESLKK-ELRKIGDEV 131 (265)
T ss_dssp HHHHHHHHH------------HC-CHH--HHHHHHHHTTH---HHHHHH-HHHHTTCCS
T ss_pred HHHHHHHHH------------hC-CHH--HHHHHHHHhCC---HHHHHH-HHHHcCCCc
Confidence 676665432 33 233 24677788776 123333 356899995
|
| >1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-06 Score=96.87 Aligned_cols=107 Identities=15% Similarity=0.152 Sum_probs=67.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|..|.+||+||.+|++++++.+++|+|+||++|. +.+ -..+.+|.+..... ...+....+.
T Consensus 52 n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~Ld~~V~--vs~-------------~~~~~~g~~~~S~~--~l~~g~~~tv 114 (369)
T 1tvf_A 52 NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT--MTN-------------KEYIMSTLPELSNT--KLYPGQVWTI 114 (369)
T ss_dssp STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE--CCH-------------HHHHHTTCTTSCCC--CCCTTCEEEH
T ss_pred CCCCeEccHHHHHHHHHHHHHHHHhcCCCCCCCeEE--ECH-------------HHHhhcCCCCccee--eccCCCeEeH
Confidence 678899999999999999999999999999999875 111 11112232211110 0111223556
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhC--CCHHHHHHHHchhccCCCCC
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGIIQPLSIDGV 665 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG--~~~~~~l~~~If~PLGm~~t 665 (968)
++++..+.-. | .|.+ .-.++|.+.| ..|-+.|+++ .++|||++|
T Consensus 115 ~dLl~~~ii~------------S-~NdA--a~aLae~vgGs~~~Fv~~MN~~-a~~LGm~~T 160 (369)
T 1tvf_A 115 ADLLQITVSN------------S-SNAA--ALILAKKVSKNTSDFVDLMNNK-AKAIGMKNT 160 (369)
T ss_dssp HHHHHHHHHS------------C-CHHH--HHHHHHHHSSSHHHHHHHHHHH-HHHTTCTTC
T ss_pred HHHHHHHHhh------------C-cHHH--HHHHHHHhCCCHHHHHHHHHHH-HHHhCCccc
Confidence 6666654322 1 2332 4456677777 3467778887 899999954
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=5.3e-07 Score=99.21 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCC
Q 002092 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178 (968)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~ 178 (968)
.+.+.+.+++.+.. + ...+-++++.|...+||+. |+.++||+.+....
T Consensus 5 ~~~l~~~l~~~~p~-~----~~~~v~~l~~G~~n~v~~v----g~~~VlR~~~~~~~----------------------- 52 (306)
T 3tdw_A 5 KLHYTTMIMTQFPD-I----SIQSVESLGEGFRNYAILV----NGDWVFRFPKSQQG----------------------- 52 (306)
T ss_dssp HHHHHHHHHHHCTT-S----CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHH-----------------------
T ss_pred HHHHHHHHHHHCCC-C----CceeeeecCCCcceeEEEE----CCEEEEEecCCchH-----------------------
Confidence 34566777777642 1 1122367889999999987 67899998532100
Q ss_pred CCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCC
Q 002092 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIR 253 (968)
Q Consensus 179 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~ 253 (968)
..++..|++.+..+++. ..+.||+++. .+..+++|||++|.+
T Consensus 53 ----------------~~~~~~E~~~L~~L~~~-----------------~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 53 ----------------ADELNKEIQLLPLLVGC-----------------VKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp ----------------HHHHHHHHHHHHHHTTT-----------------CSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred ----------------HHHHHHHHHHHHHHHhc-----------------CCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 00244677777776542 2467888874 234789999999999
Q ss_pred CCC
Q 002092 254 LND 256 (968)
Q Consensus 254 L~~ 256 (968)
+.+
T Consensus 100 l~~ 102 (306)
T 3tdw_A 100 LGE 102 (306)
T ss_dssp CHH
T ss_pred Cch
Confidence 865
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.4e-06 Score=94.71 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=28.7
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..+++|+|+||+|||++.+ +.+.||||+.+..-+
T Consensus 221 ~~~l~HgD~~~~Nil~~~~--~~~~lIDfe~a~~g~ 254 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGEN--EQIWVIDLDTVSFDL 254 (346)
T ss_dssp SCCEECSSCSTTSEEECGG--GCEEECCCTTCEECC
T ss_pred cCceecCCCCcccEEEeCC--CcEEEEehhhcccCC
Confidence 4689999999999999754 679999999886544
|
| >1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis} | Back alignment and structure |
|---|
Probab=98.27 E-value=4.8e-06 Score=91.58 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=31.3
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|+.||++|.+|++++++++++| +||++|.
T Consensus 77 n~~~~~~~aS~~K~~ta~~~l~~~~~G--~ld~~v~ 110 (307)
T 1w7f_A 77 RPDERFAFASTIKALTVGVLLQQKSIE--DLNQRIT 110 (307)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHCCTG--GGGCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCC--CCCceEE
Confidence 567899999999999999999999999 9998876
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=4.3e-06 Score=93.69 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=65.9
Q ss_pred HHHHHHHHhhhCCCccccccccccccc-cccceeEEEEEEeC-------CCCEEEEEEecCChhhhhHhhHHHHHHHHHH
Q 002092 100 QEVSQTIEREFGESMGGMFMDFVETPL-ATASIAQVHRATLV-------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDW 171 (968)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~pl-gsaSigqV~~A~l~-------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~ 171 (968)
+.+.+.|++.++.. .. ..-...+++ +.|....+|+.... +|+.+++|+..++....
T Consensus 4 ~~l~~~l~~~~~~~-~~-~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-------------- 67 (357)
T 3ats_A 4 AVISRWLSSVLPGG-AA-PEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-------------- 67 (357)
T ss_dssp HHHHHHHHHHSCTT-CC-CEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC--------------
T ss_pred HHHHHHHHHhcCCc-CC-CceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc--------------
Confidence 34666777766531 10 001123678 89999999998764 27889999876542100
Q ss_pred HHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c------CCCeE
Q 002092 172 IAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVL 244 (968)
Q Consensus 172 ~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vL 244 (968)
.....++..|++.+..++.. ..+.||+++. + +..++
T Consensus 68 --------------------~~~~~~~~~E~~~l~~L~~~-----------------~~vpvP~v~~~~~~~~~~g~~~~ 110 (357)
T 3ats_A 68 --------------------VFPTYRLDHQFEVIRLVGEL-----------------TDVPVPRVRWIETTGDVLGTPFF 110 (357)
T ss_dssp --------------------SSSCCCHHHHHHHHHHHHHH-----------------CCSCCCCEEEEECSSTTTSSCEE
T ss_pred --------------------cCchhHHHHHHHHHHHHhhc-----------------CCCCCCcEEEEccCCCccCCceE
Confidence 00112456788888877653 1467898885 2 23589
Q ss_pred EecccCCCCCCC
Q 002092 245 ILEFMDGIRLND 256 (968)
Q Consensus 245 VmE~i~G~~L~~ 256 (968)
||||++|.++.+
T Consensus 111 v~e~l~G~~l~~ 122 (357)
T 3ats_A 111 LMDYVEGVVPPD 122 (357)
T ss_dssp EEECCCCBCCCB
T ss_pred EEEecCCCChhh
Confidence 999999998764
|
| >3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.18 E-value=8.4e-06 Score=90.71 Aligned_cols=106 Identities=15% Similarity=0.098 Sum_probs=65.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|..|.+||+||.+|++++++++++|+|+||++|.- .+ .. ... . .+|-.. ....+....+.
T Consensus 27 n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~v--s~---~a---~~~----~-~~~~s~-----~~l~~g~~~tv 88 (344)
T 3a3j_A 27 NPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTI--GE---SA---WGR----N-FPDSSK-----MFLDLNTQVSV 88 (344)
T ss_dssp STTSCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEEC--CT---TT---CGG----G-CTTSCC-----CCCCTTCEEEH
T ss_pred CCCCeEccHHHHHHHHHHHHHHHHHcCCCCCCCEEEE--CH---HH---Hhc----c-cCCCce-----ecccCCCEEEH
Confidence 6788999999999999999999999999999998861 11 00 000 0 011000 00011123455
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhC--CCHHHHHHHHchhccCCCCC
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGIIQPLSIDGV 665 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG--~~~~~~l~~~If~PLGm~~t 665 (968)
++++..+.- +| .|.+ .-.++|.+.| ..|-+.|+++ .+.|||++|
T Consensus 89 ~dLl~~~l~------------~S-~NdA--a~aLae~vgGs~~~Fv~~Mn~~-a~~LG~~~T 134 (344)
T 3a3j_A 89 ADLNRGVIV------------VS-GNDA--TVALAEHISGNVPNFVETMNKY-VQQFGLKNT 134 (344)
T ss_dssp HHHHHHHHH------------HC-CHHH--HHHHHHHHHSSHHHHHHHHHHH-HHHTTCSSC
T ss_pred HHHHHHHHH------------hc-hHHH--HHHHHHHhcCCHHHHHHHHHHH-HHHcCCCce
Confidence 666665432 22 1222 3346677777 4577888888 689999953
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=5.8e-06 Score=91.15 Aligned_cols=52 Identities=6% Similarity=0.082 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCC
Q 002092 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (968)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~ 153 (968)
++++.+++.+++++ +|- .++ .+-++++.|....||+....+| .+++|+.++.
T Consensus 5 ~~~~~~~l~~~l~~-~~~--~~~---~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~ 56 (322)
T 2ppq_A 5 TDITEDELRNFLTQ-YDV--GSL---TSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR 56 (322)
T ss_dssp CCCCHHHHHHHHTT-BCC--CCE---EEEEEECC---EEEEEEEESSC-CEEEEEECC-
T ss_pred ccCCHHHHHHHHHh-CCC--Ccc---eEeeccCCCcccceEEEEeCCc-cEEEEEeCCC
Confidence 56788888888875 664 221 2346899999999999987655 6889988763
|
| >3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.08 E-value=9.3e-05 Score=80.63 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.+++..+++|+++||++|.
T Consensus 60 n~d~~~~~AS~~Kl~~a~~~l~~v~~G~l~ld~~v~ 95 (294)
T 3dw0_A 60 RAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIR 95 (294)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHTTSTTCTTCEEC
T ss_pred CCCCcccchHHHHHHHHHHHHHHHhcCCCCCcceEe
Confidence 568899999999999999999999999999999874
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.02 E-value=2e-05 Score=87.11 Aligned_cols=53 Identities=21% Similarity=0.176 Sum_probs=39.1
Q ss_pred CCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCC
Q 002092 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (968)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~ 153 (968)
.+..+.+.+...+ +.+|-.... ..++++ |....||+....+|+.++||+.+|+
T Consensus 8 ~~~l~~~~i~~~l-~~~g~~~~~-----~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~ 60 (328)
T 1zyl_A 8 FQTLHPDTIMDAL-FEHGIRVDS-----GLTPLN-SYENRVYQFQDEDRRRFVVKFYRPE 60 (328)
T ss_dssp CCCCCHHHHHHHH-HHTTCCCCS-----CCEEEC-CSSSEEEEECCTTCCCEEEEEECTT
T ss_pred CCCCCHHHHHHHH-HHcCCCCCc-----eEEeec-CcccceEEEEcCCCCEEEEEEcCCC
Confidence 4567788888888 466644321 225677 8888999988777889999998875
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=2e-05 Score=87.80 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCC
Q 002092 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (968)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~ 153 (968)
|+++.+.+.+.+.+.+|-... .+...+.|.|+...||+....+| .+++|+.++.
T Consensus 4 p~l~~~~l~~~l~~~ygl~~~----~~~~l~~G~g~~N~vy~v~~~~g-~~vLK~~~~~ 57 (339)
T 3i1a_A 4 QPIQAQQLIELLKVHYGIDIH----TAQFIQGGADTNAFAYQADSESK-SYFIKLKYGY 57 (339)
T ss_dssp CSSCTTHHHHHHHHHHCCCCS----EEEEETTTSCSSCEEEEEECSSC-EEEEEEEECS
T ss_pred CCCCHHHHHHHHHHHcCCCcc----eeEEeeccCccccceEEEEeCCC-CEEEEEecCc
Confidence 677888899999999986543 33445667777999999997777 9999987764
|
| >4ewf_A Beta-lactamase; ABA-sandwich, structural genomics, midwest center for struct genomics (MCSG), PSI-biology, cytoplasmic, hydrolase; 2.00A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=97.99 E-value=6e-05 Score=81.37 Aligned_cols=36 Identities=25% Similarity=0.161 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+.|..|..||++|.+++++++..+++|+++||++|.
T Consensus 43 n~d~~~~~AS~~Kl~~~~~~l~~v~~G~l~l~~~v~ 78 (275)
T 4ewf_A 43 NGDRRFRAASTVKIPLMIAVYRAVDAGERALTDRIV 78 (275)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeEccHHHHHHHHHHHHHHHHhcCCCCchhhcc
Confidence 568899999999999999999999999999999885
|
| >3p09_A Beta-lactamase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich, cytosol; HET: MSE; 1.90A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00015 Score=78.80 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.++++.+++|+++||++|.
T Consensus 55 n~d~~~~~AS~~Kl~~~~~vl~~v~~G~l~ld~~v~ 90 (290)
T 3p09_A 55 NESYHFPICSVFKFLLVGAILDYDMHNQGFLDKKIP 90 (290)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTGGGCEEE
T ss_pred CCCCeEecHHHHHHHHHHHHHHHhhcCCCCCcceEE
Confidence 668899999999999999999999999999999875
|
| >4euz_A Carbapenem-hydrolizing beta-lactamase SFC-1; carbapenemase, hydrolase, antibiotic resistance, beta-lactam complex; HET: HAR MEM; 1.08A {Serratia fonticola} PDB: 4eqi_A 4ev4_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00019 Score=77.73 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.+++..+++|+++||++|.
T Consensus 39 n~d~~~~~AS~~Kl~~~~~vl~~v~~G~l~ld~~v~ 74 (283)
T 4euz_A 39 RANERFPLCASFKGFLAAAVLSKSQQQEGLLNQRIR 74 (283)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTGGGCEEC
T ss_pred CCCCeEEcHHHHHHHHHHHHHHHhhCCCCCCCcEEE
Confidence 568899999999999999999999999999999874
|
| >2wuq_A BLAB, beta-lactamase regulatory protein BLAB; class A beta-lactamase fold, transcription regulation, beta-lactamase induction, transcription; 1.80A {Streptomyces cacaoi} | Back alignment and structure |
|---|
Probab=97.96 E-value=6.2e-05 Score=82.88 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ 562 (968)
++|..|..||++|++|+++++..+++|++++|++|..
T Consensus 38 ~~~~~~~pgSt~K~~~a~aal~~~~~G~~~~~~~v~~ 74 (318)
T 2wuq_A 38 DPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEV 74 (318)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhCCCCCCCCeEEe
Confidence 4577999999999999999999999999999999863
|
| >1ghp_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, beta-lactam hydrolysis, benzylpenicillin, cephaloridine; HET: PNM; 1.76A {Staphylococcus aureus} SCOP: e.3.1.1 PDB: 1ghi_A* 1ghm_A* 1kgf_A 1kge_A 1ome_A 1kgg_A 1dja_A 3blm_A 1blh_A* 1blc_A 1djc_A 1djb_A 1blp_A 1pio_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8.6e-05 Score=79.18 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=83.0
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|..|..||++|++|++++++.+++|+ ||++|.- +-.++..+ ||+.... +....+.
T Consensus 31 ~~~~~~~~aS~~K~~~a~~~l~~~~~g~--ld~~v~~-------------~~~~~~~~-s~i~~~~-------~~~~~tl 87 (258)
T 1ghp_A 31 NSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHI-------------NKDDIVAY-SPILEKY-------VGKDITL 87 (258)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHSCGGG--GGCEEEE-------------CGGGCCSS-CTTGGGG-------TTEEEEH
T ss_pred CCCCcccchHHHHHHHHHHHHHHhccCC--CCCcEEe-------------CHHHccCC-Ccchhhc-------CCCCcCH
Confidence 5678999999999999999999999998 8887651 11112221 2322211 1113455
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccC
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGI 685 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~ 685 (968)
++++..+.. || .|. ....+++++.|. +-+++ .++.|||+++.... +..
T Consensus 88 ~~l~~~~i~------------~S-~N~--aa~~L~~~~gG~---~~~~~-~~~~lG~~~t~~~~-----~~~-------- 135 (258)
T 1ghp_A 88 KALIEASMT------------YS-DNT--ANNKIIKEIGGI---KKVKQ-RLKELGDKVTNPVR-----YDI-------- 135 (258)
T ss_dssp HHHHHHHHH------------HC-CHH--HHHHHHHHHTCH---HHHHH-HHHHTTCCSCBCCS-----CTT--------
T ss_pred HHHHHHHHH------------hc-cHH--HHHHHHHHhCCH---HHHHH-HHHHcCCCceecCC-----CCh--------
Confidence 666555332 22 233 356678888773 33443 46789999532100 000
Q ss_pred CCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 686 NNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
. .+ ....+.++..+|+.||+++++.++++..++..
T Consensus 136 ----~----------------------~~-----~~~~~~~~~~~T~~d~a~~~~~l~~~~~ls~~ 170 (258)
T 1ghp_A 136 ----E----------------------LQ-----YYSPKSKKDTSTPAAFGKTLNKLIANGKLSKE 170 (258)
T ss_dssp ----G----------------------GG-----CCCTTCCTTEECHHHHHHHHHHHTTSSSSCHH
T ss_pred ----h----------------------hc-----ccCCCCCCCccCHHHHHHHHHHHHcCCCCCHH
Confidence 0 00 00012356689999999999999998765543
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.94 E-value=3.5e-05 Score=85.37 Aligned_cols=36 Identities=25% Similarity=0.159 Sum_probs=28.8
Q ss_pred cCccccCCCCCceEEecCC--CCceEEEecccccccCH
Q 002092 285 DGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (968)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 320 (968)
.+++|+|+||+|||++.+. .+.+.||||+.+..-++
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 5899999999999997531 15689999998876554
|
| >4hes_A Beta-lactamase class A-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, COG COG2367, H; HET: MSE; 1.90A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.94 E-value=7e-05 Score=80.83 Aligned_cols=72 Identities=18% Similarity=0.329 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEEcCeE--EEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCC
Q 002092 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEV--IIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (968)
Q Consensus 477 ~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~--v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l 554 (968)
.+...++..+++.-..+ -.++.+..+.+++. +. .+. ++|+.|..||++|.+++.+++..+++|+|
T Consensus 12 ~l~~~l~~~~~~~~~~~-~~~~~v~~l~d~~~~~vl-~~~-----------n~d~~~~~AS~~Kl~~~~~~~~~v~~G~l 78 (275)
T 4hes_A 12 SLEHQLDTVIKELAPAG-NISYAVLQFDDEEEPTLI-AAR-----------GENTVHSSASLIKVLIMEYVFHLARTEQL 78 (275)
T ss_dssp HHHHHHHHHHHHHCTTS-EEEEEEEEECTTSCCEEE-EEE-----------STTCCEECGGGGHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHhcccCC-ceEEEEEEEEcCCCceEE-EEE-----------CCCceecchHHHHHHHHHHHHHHHHcCCC
Confidence 44556666666654333 22343444445542 11 121 67899999999999999999999999999
Q ss_pred CccCchh
Q 002092 555 KLEENIA 561 (968)
Q Consensus 555 ~Ld~pv~ 561 (968)
+||++|.
T Consensus 79 ~l~~~v~ 85 (275)
T 4hes_A 79 DINDTVP 85 (275)
T ss_dssp CTTCEEE
T ss_pred CccceEE
Confidence 9999875
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.1e-05 Score=85.91 Aligned_cols=72 Identities=17% Similarity=0.280 Sum_probs=50.9
Q ss_pred cccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
-+|++.|...++|+. +.++||+..++... -+|..+|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--------------------------------------~~~r~~E~ 59 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--------------------------------------YINRANEA 59 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------------------------------------------CCCHHHHH
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--------------------------------------eeCHHHHH
Confidence 478999999999998 57999988765321 12345677
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEeccc-CCCCCCC
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFM-DGIRLND 256 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i-~G~~L~~ 256 (968)
+.+..+... ++. |+++. ....+++|||+ +|.++..
T Consensus 60 ~~l~~l~~~------------------g~~-P~~~~~~~~~~~~v~e~i~~g~~l~~ 97 (301)
T 3dxq_A 60 VAAREAAKA------------------GVS-PEVLHVDPATGVMVTRYIAGAQTMSP 97 (301)
T ss_dssp HHHHHHHHT------------------TSS-CCEEEECTTTCCEEEECCTTCEECCH
T ss_pred HHHHHHHHc------------------CCC-CceEEEECCCCEEEEeecCCCccCCH
Confidence 777777652 233 88876 34479999999 9988863
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=5.2e-05 Score=85.41 Aligned_cols=99 Identities=12% Similarity=0.145 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhhCCCccccc-cccccccccccceeEEEEEEeCC---------CCEEEEEEecCChhhhhHhhHHHHHHH
Q 002092 99 VQEVSQTIEREFGESMGGMF-MDFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQGIKTIILEDLKNAKSI 168 (968)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f-~~~d~~plgsaSigqV~~A~l~~---------G~~VAVKV~~p~i~~~~~~Dl~~l~~l 168 (968)
.+.+++++.+-++ .|..+- ..++-++++.|....||+....+ ++.+++|+-.++....
T Consensus 14 ~~~~~~l~~~~~~-~w~~~~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~----------- 81 (369)
T 3c5i_A 14 PLYIKKICLEKVP-EWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL----------- 81 (369)
T ss_dssp HHHHHHHHHHHCG-GGTTCCGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-----------
T ss_pred HHHHHHHHHHHCC-CCCCCCcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-----------
Confidence 3455555544433 222211 23455789999999999998754 3799999876643211
Q ss_pred HHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecc
Q 002092 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (968)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~ 248 (968)
+|...|.+.+..+... ++ +|+++......++|||
T Consensus 82 ---------------------------~~~~~E~~~l~~L~~~------------------g~-~P~~~~~~~~~~v~e~ 115 (369)
T 3c5i_A 82 ---------------------------YNTISEFEVYKTMSKY------------------KI-APQLLNTFNGGRIEEW 115 (369)
T ss_dssp ---------------------------SCHHHHHHHHHHHHHT------------------TS-SCCEEEEETTEEEEEC
T ss_pred ---------------------------ecHHHHHHHHHHHHhc------------------CC-CCceEEecCCcEEEEE
Confidence 1234577777776641 34 7888764456899999
Q ss_pred cCCCCCC
Q 002092 249 MDGIRLN 255 (968)
Q Consensus 249 i~G~~L~ 255 (968)
++|.++.
T Consensus 116 i~G~~l~ 122 (369)
T 3c5i_A 116 LYGDPLR 122 (369)
T ss_dssp CCSEECC
T ss_pred ecCCcCC
Confidence 9998764
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.81 E-value=4.3e-05 Score=87.71 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=29.6
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+++|+|+||+|||++.+ + ++||||+.+..-++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~--~-~~lID~e~a~~G~p~ 265 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQD--S-TQVIDPEFSFYGPMG 265 (420)
T ss_dssp CCEEECSCCSGGGEEECSS--C-EEECCCTTCEEECHH
T ss_pred CCeEEecCCCCCcEEEeCC--C-CEEEeCcccccCchH
Confidence 4689999999999999854 4 999999998876654
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00014 Score=83.84 Aligned_cols=52 Identities=10% Similarity=0.119 Sum_probs=34.7
Q ss_pred HHHHHHHhhhCCCcccc-ccccccccccccceeEEEEEEeCC--------CCEEEEEEecC
Q 002092 101 EVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQ 152 (968)
Q Consensus 101 ~v~~~l~~elg~~~~~~-f~~~d~~plgsaSigqV~~A~l~~--------G~~VAVKV~~p 152 (968)
.+++++.+-++..|..+ -..++-++|+.|-...||+....+ ++.|+||+-++
T Consensus 55 ~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~ 115 (429)
T 1nw1_A 55 RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN 115 (429)
T ss_dssp HHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred HHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence 44555555455444422 123455789999999999998753 58999998754
|
| >1es5_A DD-transpeptidase; penicillin-binding, serine peptidase, BET lactamase, hydrolase carboxypeptidase, hydrolase; 1.40A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1skf_A 1es2_A 1j9m_A 1esi_A 1es3_A 1es4_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00014 Score=77.94 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=30.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|++||++|.+|+++++ ++|+++||++|.
T Consensus 26 n~~~~~~~AS~tKlmta~~~l---~~g~l~l~~~v~ 58 (262)
T 1es5_A 26 AADTRRSTGSTTKIMTAKVVL---AQSNLNLDAKVT 58 (262)
T ss_dssp STTCCBCCGGGGHHHHHHHHH---TCTTCCTTCEEE
T ss_pred CCCCcCCcHHHHHHHHHHHHH---HcCCCCCCCeEE
Confidence 568999999999999999998 899999999876
|
| >1xp4_A D-alanyl-D-alanine carboxypeptidase; five-stranded antiparallel beta-sheet, omega-like loop, hydrolase; 2.80A {Streptococcus pneumoniae R6} SCOP: b.105.1.1 e.3.1.1 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00032 Score=78.93 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|++||+||.+|++++++.+++|+|+||++|.
T Consensus 32 n~d~~~~~AS~tKlmta~~vl~~i~~G~l~ld~~V~ 67 (379)
T 1xp4_A 32 DATQPVEIASITKLITVYLVYEALENGSITLSTPVD 67 (379)
T ss_dssp SCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCcCCchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 568899999999999999999999999999999875
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00017 Score=81.39 Aligned_cols=164 Identities=13% Similarity=0.146 Sum_probs=94.0
Q ss_pred HHHHHHHHHhhhCCCcccc-ccccccccccccceeEEEEEEeC--------CCCEEEEEEecCChhhhhHhhHHHHHHHH
Q 002092 99 VQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIV 169 (968)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~-f~~~d~~plgsaSigqV~~A~l~--------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~ 169 (968)
.+.+.+++.+-++..|..+ -..++-+++..|-...+|+.... +++.|++|+..+....
T Consensus 30 ~~~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~------------- 96 (379)
T 3feg_A 30 ERRAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQG------------- 96 (379)
T ss_dssp HHHHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CC-------------
T ss_pred HHHHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccch-------------
Confidence 3455666666676666653 24566789999999999999874 3589999984331110
Q ss_pred HHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEeccc
Q 002092 170 DWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFM 249 (968)
Q Consensus 170 ~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i 249 (968)
-.++.+|++++..+... ++ .|+++.....-+||||+
T Consensus 97 -------------------------~~~~~rE~~vl~~L~~~------------------gv-~P~ll~~~~~g~v~e~i 132 (379)
T 3feg_A 97 -------------------------VDSLVLESVMFAILAER------------------SL-GPQLYGVFPEGRLEQYI 132 (379)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHT------------------TS-SCCEEEEETTEEEEECC
T ss_pred -------------------------HHHHHHHHHHHHHHHhc------------------CC-CCeEEEEcCCccEEEEe
Confidence 01233678888877652 23 48887633335999999
Q ss_pred CCCCCCCHH--------H-------HHhcC------CC-H-HHHHH---HH----------------------HHHHHHH
Q 002092 250 DGIRLNDCE--------S-------LEAFG------VN-K-QKVVE---EI----------------------TRAYAHQ 281 (968)
Q Consensus 250 ~G~~L~~~~--------~-------~~~~~------~~-~-~~l~~---~l----------------------~~~~l~~ 281 (968)
+|.++.... . +.... .. . .++.. .+ ++. ++.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-L~~ 211 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN-LRK 211 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH-HHH
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH-HHH
Confidence 998886321 0 00110 01 1 11111 00 011 112
Q ss_pred HH-----hcCccccCCCCCceEEecC--CCCceEEEecccccccCH
Q 002092 282 IY-----VDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 282 i~-----~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (968)
.+ ...++|+|++++|||++.+ +++.+.||||..++.-++
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~ 257 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYR 257 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEH
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCCh
Confidence 22 1479999999999999854 136899999999886544
|
| >3qhy_A Beta-lactamase; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0037 Score=67.10 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=29.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.+++..+++| +||++|.
T Consensus 45 n~d~~~~~AS~~Kl~~~~~~l~~~~~g--~ld~~v~ 78 (271)
T 3qhy_A 45 RPNERFAFASTYKALAAGVLLQQNSTK--KLDEVIT 78 (271)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHSCGG--GGGSEEC
T ss_pred CCCCcccchHHHHHHHHHHHHHHhhCC--CCCCeEE
Confidence 568899999999999999999999988 6777653
|
| >3ita_A D-alanyl-D-alanine carboxypeptidase DACC; ppenicillin-binding protein, BP6, DD-carboxypeptidase, peptidoglycan, ampicillin, acyl-enzyme complex; HET: AIX AIC; 1.80A {Escherichia coli} PDB: 3it9_A* 3itb_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00091 Score=74.20 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|.+||+||.+|+.+++..+++|+++||++|.
T Consensus 31 n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~ 66 (352)
T 3ita_A 31 NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 66 (352)
T ss_dssp STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCcccchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 568899999999999999999999999999999865
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0011 Score=75.95 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=68.8
Q ss_pred HHHHHHhhcCCCC----CHHHHHHHHHhhhCCCccccc-cccccccccccceeEEEEEEeCC--------CCEEEEEEec
Q 002092 85 SLLKQLQDSLPPR----PVQEVSQTIEREFGESMGGMF-MDFVETPLATASIAQVHRATLVD--------GRQVVVKVQH 151 (968)
Q Consensus 85 ~~L~~Lqd~~p~~----~~~~v~~~l~~elg~~~~~~f-~~~d~~plgsaSigqV~~A~l~~--------G~~VAVKV~~ 151 (968)
+-+..|.+-++.+ +.+.+++++.+-+.. |..+- ..++-+++..|-...+|+....+ ++.+++|+..
T Consensus 33 ~~~~~l~~~~~~~~~~~d~~~l~~l~~~~~p~-w~~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g 111 (424)
T 3mes_A 33 ELGDKLSESIRSFSTITDTEIIIGICRKNIPG-WKEINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYG 111 (424)
T ss_dssp -----------------CHHHHHHHHHHHSTT-CTTCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECC
T ss_pred cccccchHHHHHhccCCCHHHHHHHHHHHcCc-cccCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECC
Confidence 3344444444443 456677777766543 33211 24556789999999999998753 6899999865
Q ss_pred CChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCce
Q 002092 152 QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV 231 (968)
Q Consensus 152 p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v 231 (968)
++... -+|..+|.+.+..+... ++
T Consensus 112 ~~t~~--------------------------------------~idR~~E~~~l~~L~~~------------------gi 135 (424)
T 3mes_A 112 KHVGK--------------------------------------FYDSKVELDVFRYLSNI------------------NI 135 (424)
T ss_dssp CCC-C--------------------------------------CCCHHHHHHHHHHHHHT------------------TS
T ss_pred CCcch--------------------------------------hcCHHHHHHHHHHHHhc------------------CC
Confidence 54321 12445688888877652 23
Q ss_pred EeeeeeecCCCeEEecccCCCCCCC
Q 002092 232 LIPEVIQSSETVLILEFMDGIRLND 256 (968)
Q Consensus 232 ~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (968)
+|+++.....++||||++|..+..
T Consensus 136 -~P~l~~~~~~~~I~efI~G~~l~~ 159 (424)
T 3mes_A 136 -APNIIADFPEGRIEEFIDGEPLTT 159 (424)
T ss_dssp -SCCEEEEETTEEEEECCCSEECCT
T ss_pred -CCCEEEEcCCCEEEEEeCCccCCh
Confidence 688876555689999999988753
|
| >3ny4_A Beta-lactamase, penicillinase; penicillin binding protein, beta-lactam complex, hydrolase-A complex; HET: SMX; 1.22A {Mycobacterium tuberculosis} PDB: 3m6b_A* 3dwz_A* 3iqa_A* 3cg5_A* 3m6h_A* 4df6_A* 2gdn_A 3vfh_A* 3vff_A* 3n8l_A* 3n6i_A* 3n7w_A* 3n8r_A* 3n8s_A* 3nbl_A* 3nc8_A* 3nck_A* 3nde_A* 3ndg_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0039 Score=66.67 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=28.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCch
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv 560 (968)
+.|..|..||++|.+++.+++..+++| +||++|
T Consensus 33 n~d~~~~~AS~~Kl~~~~~~l~~~~~~--~ld~~v 65 (265)
T 3ny4_A 33 RADERFAFCSTFAAPLVAAVLHQNPLT--HLDKLI 65 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHSCGG--GGGCEE
T ss_pred CCCCceechHHHHHHHHHHHHHHhhcC--CCCceE
Confidence 568899999999999999999998886 677664
|
| >1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00037 Score=74.75 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=83.3
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCH
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (968)
++|..|..||++|.+|++++++.+++|+ ||++|. ++ -.+++.+ ||+.... +....+.
T Consensus 76 n~d~~~~~ASt~Kl~ta~~~l~~v~~G~--ld~~v~--i~-----------~~~~~~~-s~i~~~~-------~g~~~tl 132 (266)
T 1alq_A 76 NSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVH--IN-----------KDDIVAY-SPILEKY-------VGKDITL 132 (266)
T ss_dssp STTSCEECGGGHHHHHHHHHHHSSCGGG--TTCEEE--EC-----------GGGCCSS-CTTGGGG-------TTEEEEH
T ss_pred CCCCeEecHHHHHHHHHHHHHHHHhcCC--CCceEE--ec-----------HHHhcCC-CCceecC-------CCCceeH
Confidence 4678999999999999999999999999 888775 11 1111222 2322210 1113455
Q ss_pred HHHHHHHHccCCCCCCCCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccC
Q 002092 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGI 685 (968)
Q Consensus 606 ~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~ 685 (968)
++++..+... | .|.+ ...+++++.|. +-+++ .++.|||.++.... +....
T Consensus 133 ~~Ll~~mi~~------------S-dN~A--a~~L~~~lgG~---~~~n~-~~~~lG~~~T~~~~-----~~~~l------ 182 (266)
T 1alq_A 133 KALIEASMTY------------S-DNTA--NNKIIKEIGGI---KKVKQ-RLKELGDKVTNPVR-----YEIEL------ 182 (266)
T ss_dssp HHHHHHHHHH------------C-CHHH--HHHHHHHHTCH---HHHHH-HHHHTTCCSCCCCC-----CTTGG------
T ss_pred HHHHHHHHhc------------C-CHHH--HHHHHHHcCCH---HHHHH-HHHHcCCCCcccCC-----Cchhh------
Confidence 6665553332 2 2332 56678888773 33553 46779999532100 00000
Q ss_pred CCCCCCCCCCCCCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 686 NNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
+ ....+..+-++|+.||+++++++++|+.++..
T Consensus 183 ----------------------------~-----~~~~~~~~~~tTa~d~a~l~~~l~~g~~ls~~ 215 (266)
T 1alq_A 183 ----------------------------N-----YYSPKSKKDTSTPAAFGKTLNKLIANGKLSKE 215 (266)
T ss_dssp ----------------------------G-----CCCTTCCTTEECHHHHHHHHHHHTTSSSCCHH
T ss_pred ----------------------------c-----ccCCCCCCCcCCHHHHHHHHHHHHcCCCCCHH
Confidence 0 00012344579999999999999998876654
|
| >3mzf_A D-alanyl-D-alanine carboxypeptidase DACA; beta-lactam antibiotic, penicillin-binding protein, DD- carboxypeptidase, hydrolase; HET: IM2; 1.50A {Escherichia coli} PDB: 1nzu_A 1nzo_A* 3beb_A* 3bec_A* 3mzd_A* 3mze_A* 1z6f_A* 1nj4_A 1hd8_A 1sdn_A 4drt_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0014 Score=72.90 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=33.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|.+||+||.+|+.+++..+++|+++||++|.
T Consensus 35 n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~ 70 (363)
T 3mzf_A 35 NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 70 (363)
T ss_dssp STTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCcCcchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 568899999999999999999999999999999764
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00091 Score=77.46 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=51.8
Q ss_pred ccccccccccceeEEEEEEeCC-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 120 DFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 120 ~~d~~plgsaSigqV~~A~l~~-G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
.++-++|+.|-...+|+....+ ++.+++|+..++.... +|.
T Consensus 110 ~~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~--------------------------------------idR 151 (458)
T 2qg7_A 110 SLEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI--------------------------------------INR 151 (458)
T ss_dssp TEEEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC--------------------------------------SCH
T ss_pred CeEEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh--------------------------------------cCH
Confidence 3455789999999999998754 5889999876543211 133
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCC
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLN 255 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~ 255 (968)
..|++.+..+.. .++ .|+++......++|||++|.++.
T Consensus 152 ~~E~~vl~~L~~------------------~gl-~P~ll~~~~~G~v~e~I~G~~l~ 189 (458)
T 2qg7_A 152 EREKKISCILYN------------------KNI-AKKIYVFFTNGRIEEFMDGYALS 189 (458)
T ss_dssp HHHHHHHHHHTT------------------SSS-BCCEEEEETTEEEEECCCSEECC
T ss_pred HHHHHHHHHHHh------------------cCC-CCCEEEEeCCeEEEEeeCCccCC
Confidence 467777766643 122 57777633456799999998875
|
| >3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0026 Score=72.30 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=33.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..+.+||+||.+|+.+++..+++|+|+||+.|.
T Consensus 88 Nad~~~~pAS~TKlMTa~~vle~i~~Gkl~Ld~~Vt 123 (453)
T 3hun_A 88 NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT 123 (453)
T ss_dssp STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCcccchHHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 568899999999999999999999999999999764
|
| >3lez_A Beta-lactamase; antibiotic resistance, halotolerant, DEEP- SEA bacterium, hydrolase; HET: EPE; 1.25A {Oceanobacillus iheyensis} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0086 Score=63.80 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=28.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCch
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv 560 (968)
+.|..|..||++|.+++.+++..+++| +||++|
T Consensus 32 n~d~~~~~AS~~Kl~~~~~~l~~~~~g--~ld~~v 64 (260)
T 3lez_A 32 RENERFAYTSTFKPLAVGAVLQTKSDE--ELEETI 64 (260)
T ss_dssp STTSEEECGGGGHHHHHHHHHHHCCHH--HHHSEE
T ss_pred CCCCcccchHHHHHHHHHHHHHhccCC--CCCceE
Confidence 568899999999999999999999888 566654
|
| >4dxb_A RG13, maltose-binding periplasmic protein, beta-lactama chimera; TEM, beta-lactamase, MBP, allosteric regulation, zinc bindin maltose binding; 2.29A {Escherichia coli} PDB: 4dxc_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0052 Score=74.28 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
..|.+|.++|++|+++++++++.+++|+++||++|.
T Consensus 417 ~~d~~fp~aS~~K~~~~~~~l~~~~~g~~~l~~~v~ 452 (637)
T 4dxb_A 417 RPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIH 452 (637)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 457889999999999999999999999999999874
|
| >3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.057 Score=59.16 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=24.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCch
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv 560 (968)
++|..+.+||+||.+|+.++ +++|+ ||+.|
T Consensus 27 n~d~~~~pAS~tKlmTa~~a---l~~g~--ld~~v 56 (334)
T 3mfd_A 27 DEHQKRRIASITKIMTAVLA---IESGK--MDQTV 56 (334)
T ss_dssp STTCCBCCGGGGHHHHHHHH---HHTTC--TTSEE
T ss_pred CCCCcccchHHHHHHHHHHH---HhcCC--CCCeE
Confidence 56888999999999999774 57886 66654
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.083 Score=59.81 Aligned_cols=55 Identities=11% Similarity=0.090 Sum_probs=34.7
Q ss_pred HHHhhhCCCccccc-cccccccccccceeEEEEEEeCC--------CCEEEEEEecCChhhhhH
Q 002092 105 TIEREFGESMGGMF-MDFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIIL 159 (968)
Q Consensus 105 ~l~~elg~~~~~~f-~~~d~~plgsaSigqV~~A~l~~--------G~~VAVKV~~p~i~~~~~ 159 (968)
.+.+-++..|..+= ++++-++|.-|-.-.+|+....+ ++.|+++|--++....+.
T Consensus 38 ~c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~ 101 (401)
T 3g15_A 38 WCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSC 101 (401)
T ss_dssp HHHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-------
T ss_pred HHHHhCCccccCCCcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhh
Confidence 45555665554432 35677899889999999998754 367999998777665443
|
| >3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: MSE; 1.50A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.041 Score=59.27 Aligned_cols=36 Identities=19% Similarity=0.067 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+|+++++..+++|+++||++|.
T Consensus 68 n~d~~~~~AS~~Kl~~a~~~l~~v~~G~l~ld~~v~ 103 (282)
T 3cjm_A 68 NGQHEFYTASTIKVPLTMLVADTVASGQKKWTDLIP 103 (282)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHHCCCCCCcceEE
Confidence 568889999999999999999999999999999875
|
| >2xep_A ORF12; hydrolase; 1.50A {Streptomyces clavuligerus} PDB: 2xf3_A* 2xfs_A* 2xft_A 2xgn_A 2xh9_A* | Back alignment and structure |
|---|
Probab=93.67 E-value=0.059 Score=62.10 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=33.3
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+.|..|..||++|.+++.++++.+++|+++||++|.
T Consensus 164 n~d~~~~~ASt~Kl~~a~~vl~~v~~G~l~ld~~v~ 199 (458)
T 2xep_A 164 APERPMPTGSAYKLYLMRALVAEIEKGTVGWDEILT 199 (458)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHHhcCCCCCCCeEE
Confidence 567889999999999999999999999999999874
|
| >2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=92.07 E-value=0.87 Score=48.58 Aligned_cols=31 Identities=16% Similarity=0.074 Sum_probs=24.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+|+++++..+ +||++|.
T Consensus 37 n~d~~~~pAS~tKlmta~~~le~~-----~ld~~v~ 67 (276)
T 2bcf_A 37 DQNVAHPPASTIKVLLALVALDEL-----DLNSTVV 67 (276)
T ss_dssp STTCCBCCGGGHHHHHHHHHHHHC-----CTTCEEE
T ss_pred CCCCcCCcHHHHHHHHHHHHHHhC-----CCCCEEE
Confidence 468889999999999999998753 4666543
|
| >1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3 | Back alignment and structure |
|---|
Probab=91.47 E-value=0.23 Score=53.90 Aligned_cols=90 Identities=13% Similarity=0.231 Sum_probs=50.8
Q ss_pred CeEEecccCCCCCCCHHHH--HhcCCCHHHHHHHHHHHHHHHHHhcCcc------ccCCCCCceEEecCCCCceEEEecc
Q 002092 242 TVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEITRAYAHQIYVDGFF------NGDPHPGNFLVSKDPPHRPILLDFG 313 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~--~~~~~~~~~l~~~l~~~~l~~i~~~G~~------H~D~hPgNIlv~~~~~g~i~LiDFG 313 (968)
-.++|||++|..|...... .+. +. .+..+.+-++++--++..++= +.-=.|+|||+.++ ++++++||.+
T Consensus 157 ~~l~meyv~G~~L~e~~~~~~~~~-f~-~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~-n~~~~~IDhn 233 (342)
T 1cja_A 157 NILLMELVRGITLNKLTTTSAPEV-LT-KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER-GATVVPIDSK 233 (342)
T ss_dssp EEEEEECCCEEESTTCCSSSHHHH-SC-HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB-TTCEEECSCC
T ss_pred ceehhhhcCCCccccchhhhhhhh-cC-HHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC-CCeEEEEcCC
Confidence 3599999999988764221 110 12 234444545554344432211 11247899999975 3579999999
Q ss_pred cccccCHH-HHHHHHHHHHHHH
Q 002092 314 LTKKLSSS-MKQALAKMFFAAA 334 (968)
Q Consensus 314 ~~~~l~~~-~r~~~~~l~~a~~ 334 (968)
++..-+.. .-..+..++..+.
T Consensus 234 ~af~~~s~~y~~rv~~ll~~~~ 255 (342)
T 1cja_A 234 IIPLDASHPHGERVRELLRTLI 255 (342)
T ss_dssp CCCCCSSCTHHHHHHHHHHHHH
T ss_pred ccccCCcHHHHHHHHHHHHHHH
Confidence 98654433 2333334444443
|
| >3pbt_A Penicillin-binding protein 3; PBP3, hydrolase-antibiotic complex; HET: UE1; 1.64A {Pseudomonas aeruginosa} PDB: 3pbn_A* 3pbo_A* 3pbr_A* 3pbs_A* 3pbq_A* 4fsf_A* 3oc2_A 3ocl_A* 3ocn_A* | Back alignment and structure |
|---|
Probab=84.78 E-value=6.5 Score=45.95 Aligned_cols=83 Identities=11% Similarity=-0.004 Sum_probs=50.6
Q ss_pred CchHHHHHHHHHHHhccCCCccceEEEEE--EcCeEEEEeeeecCCCCCCCCCC----------CCCcceeecchHHHHH
Q 002092 475 HSDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQ----------PDSLFPVFSVTKGITA 542 (968)
Q Consensus 475 ~~~l~~~l~~~l~~~~~~~~~~G~~v~V~--~~g~~v~~~~~G~~~~~~~~~~~----------~dt~f~i~S~SK~~ta 542 (968)
..+++..+++.+.+.+++......++.|+ +.|+++. ..+..+...+.... ....|.-||.-|+||+
T Consensus 183 D~~lQ~~ae~~l~~~~~~~~~~~ga~Vvmdp~TGeILA--m~s~p~ydpn~~~~~~~~~~~Nra~~~~~~PGSTfKp~t~ 260 (538)
T 3pbt_A 183 DLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILA--MTNQPTYNPNNRRNLQPAAMRNRAMIDVFEPGSTVKPFSM 260 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTCBEEE--EEEESCCCTTCCSSCCGGGGCCHHHHCCBCCGGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCCceEEEEEEECCCCcEEE--EEeCCCCCcccccccCccccccceeeceeCCchhHHHHHH
Confidence 45666777777766554443334444454 4677765 33333332221111 1357899999999998
Q ss_pred HHHHHHHHCCCCCccCchhh
Q 002092 543 GMLHWLVDNGKLKLEENIAN 562 (968)
Q Consensus 543 ~~i~~lve~G~l~Ld~pv~~ 562 (968)
++++ |+|.++.++.+..
T Consensus 261 aaAL---e~G~i~p~~~~~~ 277 (538)
T 3pbt_A 261 SAAL---ASGRWKPSDIVDV 277 (538)
T ss_dssp HHHH---HTTSCCTTCEEEC
T ss_pred HHHH---HcCCCCCCcEEEc
Confidence 6654 8899998887753
|
| >3ue3_A Septum formation, penicillin binding protein 3, peptidoglycan synthetase; transpeptidase, transferase; 2.30A {Acinetobacter} | Back alignment and structure |
|---|
Probab=83.10 E-value=6.4 Score=46.22 Aligned_cols=83 Identities=14% Similarity=0.101 Sum_probs=50.6
Q ss_pred CchHHHHHHHHHHHhccCCCccceEEEEE--EcCeEEEEeeeecCCCCCCCCCC-----------CCCcceeecchHHHH
Q 002092 475 HSDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQ-----------PDSLFPVFSVTKGIT 541 (968)
Q Consensus 475 ~~~l~~~l~~~l~~~~~~~~~~G~~v~V~--~~g~~v~~~~~G~~~~~~~~~~~-----------~dt~f~i~S~SK~~t 541 (968)
..+++..+++.+.+.+++......++.|+ +.|+++.- .+..+...+.... ....|.-||.-|+||
T Consensus 210 D~~lQ~~ae~~l~~~~~~~~~~~ga~Vvmdp~TGeILAm--~s~p~ydpn~~~~~~~~~p~~Nra~~~~y~PGStfKp~t 287 (554)
T 3ue3_A 210 DSRLQYIMYRELTAAGVANNARSATAIAVDVKTGEILAM--TSWPSYNPNDKGGLSNKDAMRNRGAIDMFEPGSTMKPFT 287 (554)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTCBEEEE--EEESCCCTTCCSSCCHHHHSSCHHHHCCBCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHhhhhhcCCceEEEEEEECCCCeEEEE--EeCCCCCcccccccccccccccccccCCcCCcHHHHHHH
Confidence 45666777777766554444334444454 46777653 3333332221111 124789999999999
Q ss_pred HHHHHHHHHCCCCCccCchhh
Q 002092 542 AGMLHWLVDNGKLKLEENIAN 562 (968)
Q Consensus 542 a~~i~~lve~G~l~Ld~pv~~ 562 (968)
++++ .|+|.++.++.+..
T Consensus 288 ~aaA---Le~G~i~p~~~~~~ 305 (554)
T 3ue3_A 288 VAAA---LESGQYTPNSIVNT 305 (554)
T ss_dssp HHHH---HHTTSCCTTCEEEC
T ss_pred HHHH---HHcCCCCCCcEEec
Confidence 7665 47899998887753
|
| >1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C* | Back alignment and structure |
|---|
Probab=80.15 E-value=11 Score=45.53 Aligned_cols=82 Identities=15% Similarity=0.017 Sum_probs=46.8
Q ss_pred CchHHHHHHHHHHHhccCCCccceEEEEE--EcCeEEEEeeeecCCCCCCC-----------CCCCCCcceeecchHHHH
Q 002092 475 HSDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPR-----------PVQPDSLFPVFSVTKGIT 541 (968)
Q Consensus 475 ~~~l~~~l~~~l~~~~~~~~~~G~~v~V~--~~g~~v~~~~~G~~~~~~~~-----------~~~~dt~f~i~S~SK~~t 541 (968)
..+++...++.+++.++...-...++.|+ +.|+++.-. +..+..... .......|.-||.-|+||
T Consensus 218 D~~lQ~~ae~~l~~~~~~~~~~~ga~Vv~dp~TGeIlAm~--~~p~yd~n~~~~~~~~~~~~n~a~~~~~~PGStfKp~t 295 (702)
T 1qme_A 218 SSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATT--QRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMM 295 (702)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEEEEEETTTCBEEEEE--EESCCCTTTCTTCCTTCCCCCTTTSCCBCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEe--cCCCCCCccccccCchhhhhhhhhccccCCchhHHHHH
Confidence 44555666666655443222223334444 467777533 322222110 111245789999999999
Q ss_pred HHHHHHHHHCCCCCccCchh
Q 002092 542 AGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 542 a~~i~~lve~G~l~Ld~pv~ 561 (968)
+++++ |+|.++.++.+.
T Consensus 296 ~aaAL---e~G~~~~~~~~~ 312 (702)
T 1qme_A 296 LAAAI---DNNTFPGGEVFN 312 (702)
T ss_dssp HHHHH---HTTCCCTTCEEE
T ss_pred HHHHH---HcCCcCCCCEEe
Confidence 77664 889999887765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 968 | ||||
| d1ci9a_ | 377 | e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli | 5e-21 | |
| d2drwa1 | 362 | e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochro | 7e-21 | |
| d1onha_ | 363 | e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterob | 8e-18 | |
| d1ei5a3 | 333 | e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal dom | 7e-17 | |
| d2hdsa1 | 358 | e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Es | 2e-16 | |
| d1yqsa1 | 345 | e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpept | 7e-15 |
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} Length = 377 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Score = 94.0 bits (232), Expect = 5e-21
Identities = 68/311 (21%), Positives = 125/311 (40%), Gaps = 22/311 (7%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
+ + A+L + + +++G + GE++ + G+ R RP++ D+LF + S
Sbjct: 2 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLAS 61
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGK----DLIKVHHVLNHTSGLHNVS 591
VTK I A + LV G+L L+ + PEF+ L+ +HH+L HTSGL
Sbjct: 62 VTKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWL 121
Query: 592 VD----------LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 641
++ +S L D DE L R+A + PG + Y + G ++E
Sbjct: 122 LEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSG--WQYSLALDVLGAVVE 179
Query: 642 RASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQ-PD 700
RA+G+ ++ + QPL + ++ + + +R+ + P
Sbjct: 180 RATGQPLAAAVDALVAQPLGMR----DCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPL 235
Query: 701 KISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAA-LADGGVVPPPHSRLSKPP 759
AA+ A + A + SA + R A A+ G +P + ++
Sbjct: 236 PEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRD 295
Query: 760 LGSHPHIPKFP 770
+ P
Sbjct: 296 QAGVGAETRGP 306
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} Length = 362 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Score = 93.2 bits (230), Expect = 7e-21
Identities = 50/275 (18%), Positives = 96/275 (34%), Gaps = 9/275 (3%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
SD+ ++ L + G ++G+ + GE +G +++ P+ D LF + S
Sbjct: 1 SDLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIAS 59
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 595
TK A LH LV +G + L+E I +P+ + V +LNH SGL + +
Sbjct: 60 CTKSFIATGLHLLVQDGTVDLDEPITRWFPDL--PKAAQMPVRILLNHRSGLPDFETSMP 117
Query: 596 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 655
+ + + + + + + L G II +GK + + L
Sbjct: 118 MISDKSWTAQEIV--DFSFRHGVQKEPWHGMEYSNTGYVLAGMIIAHETGKPYSDHLRSR 175
Query: 656 IIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNM 715
I PL G++ + G + +
Sbjct: 176 IFAPL---GMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTEW 232
Query: 716 LNIRRAIIPAANGHCSARALARYYAALADGGVVPP 750
+ A + + R + ++ AL DG ++
Sbjct: 233 FPLSG-ANAAGDMVSTPRDIVKFLNALFDGRILDQ 266
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} Length = 363 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Score = 84.0 bits (206), Expect = 8e-18
Identities = 43/280 (15%), Positives = 100/280 (35%), Gaps = 33/280 (11%)
Query: 473 PIHSD-VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLF 531
P+ + + + + L + G+ V G+ + G +PV P +LF
Sbjct: 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYY-TFGKADIAANKPVTPQTLF 59
Query: 532 PVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVS 591
+ S++K T + + G++ L++ + WP+ I++ + +T+G +
Sbjct: 60 ELGSISKTFTGVLGGDAIARGEISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPL- 118
Query: 592 VDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEI 651
+ P + D L P+ +PG +LY S L G + + SG +++
Sbjct: 119 -----QVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASI-GLFGALAVKPSGMPYEQA 172
Query: 652 LEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711
+ +++PL +D + + + ++ K + ++P
Sbjct: 173 MTTRVLKPLKLD----------------HTWINVPKAEEAHYAWGYRDGKAVRAVRVSPG 216
Query: 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751
+ + A + + +A + A V
Sbjct: 217 MLDA--------QAYGVKTNVQDMANWVMANMAPENVADA 248
|
| >d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]} Length = 333 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-aminopeptidase, N-terminal domain species: Ochrobactrum anthropi [TaxId: 529]
Score = 80.9 bits (198), Expect = 7e-17
Identities = 43/273 (15%), Positives = 85/273 (31%), Gaps = 31/273 (11%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
+ L F+ + + K G V KDGEV++ + G P+ D+ P+ SV+K
Sbjct: 5 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQ 64
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSV--DLSSE 597
T +L V + L++ + +F+ + V + N+ SGL + L
Sbjct: 65 FTCAVLLDAVGEPE-LLDDALEAYLDKFE---DERPAVRDLCNNQSGLRDYWALSVLCGA 120
Query: 598 NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGII 657
+P + + + + + + +IE +G+ +IL E I
Sbjct: 121 DPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFRILADLIEAHTGRTLVDILSERIF 180
Query: 658 QPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLN 717
P + + + D+ + T F
Sbjct: 181 AP-------------------------AGMKRAELISDTALFDECTGYEGDTVRGFLPAT 215
Query: 718 IRRAIIPAANGHCSARALARYYAALADGGVVPP 750
R + A S + + +
Sbjct: 216 NRIQWMGDAGICASLNDMIAWEQFIDATRDDES 248
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} Length = 358 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Score = 79.8 bits (195), Expect = 2e-16
Identities = 46/274 (16%), Positives = 93/274 (33%), Gaps = 35/274 (12%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
+ + + L KI G+ V G+ + G +PV +LF + SV
Sbjct: 4 QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSV 62
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K T + + G++KL + WPE + + I + H+ +T+G L
Sbjct: 63 SKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGG------LPL 116
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
+ P + + L P PG ++LY S L G + + SG F++ ++ +
Sbjct: 117 QVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSI-GLFGALAVKPSGLSFEQAMQTRV 175
Query: 657 IQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNML 716
QPL ++ + + + ++ K +
Sbjct: 176 FQPLKLN----------------HTWINVPPAEEKNYAWGYREGK-----------AVHV 208
Query: 717 NIRRAIIPAANGHCSARALARYYAALADGGVVPP 750
+ A + +AR+ + +
Sbjct: 209 SPGALDAEAYGVKSTIEDMARWVQSNLKPLDINE 242
|
| >d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]} Length = 345 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., R61 [TaxId: 1931]
Score = 74.8 bits (182), Expect = 7e-15
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
Query: 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTK 538
+ L+ L + G G V +G I S G+ R R + F V SVTK
Sbjct: 6 DTGLQAVLHTALSQG-APGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTK 63
Query: 539 GITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE- 597
+A +L LVD GKL L+ ++ P D I V V++H SGL++ + D+ ++
Sbjct: 64 SFSAVVLLQLVDEGKLDLDASVNTYLPGL--LPDDRITVRQVMSHRSGLYDYTNDMFAQT 121
Query: 598 ------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636
+ + + + PG Y +F
Sbjct: 122 VPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAG 166
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 968 | |||
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d1yqsa1 | 345 | D-ala carboxypeptidase/transpeptidase {Streptomyce | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d1ei5a3 | 333 | D-aminopeptidase, N-terminal domain {Ochrobactrum | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.77 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.69 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.67 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.67 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.66 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.65 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.65 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.65 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.65 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.64 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.63 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.63 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.63 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.62 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.62 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.62 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.62 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.62 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.62 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.61 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.6 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.6 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.59 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.59 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.58 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.58 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.58 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.57 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.57 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.56 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.56 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.56 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.55 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.55 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.54 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.54 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.53 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.52 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.52 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.52 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.51 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.51 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.51 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.51 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.49 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.49 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.49 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.48 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.48 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.47 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.47 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.46 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.45 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.45 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.45 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.44 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.43 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.43 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.41 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.38 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.33 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.09 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.61 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 98.29 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.28 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.15 | |
| d1tvfa2 | 301 | Pencillin binding protein 4 (PbpD), N-terminal dom | 97.68 | |
| d1iysa_ | 261 | beta-Lactamase, class A {Escherichia coli, TOHO-1 | 97.51 | |
| d1o7ea_ | 267 | beta-Lactamase, class A {Stenotrophomonas maltophi | 97.5 | |
| d1m40a_ | 263 | beta-Lactamase, class A {Escherichia coli, TEM-1 [ | 97.46 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.44 | |
| d1n9ba_ | 265 | beta-Lactamase, class A {Klebsiella pneumoniae, SH | 97.28 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.22 | |
| d1bsga_ | 266 | beta-Lactamase, class A {Streptomyces albus G [Tax | 97.12 | |
| d3beca2 | 259 | Penicillin-binding protein 5, N-terminal domain {E | 97.07 | |
| d1g6aa_ | 266 | beta-Lactamase, class A {Pseudomonas aeruginosa, P | 97.05 | |
| d1es5a_ | 260 | D-ala carboxypeptidase/transpeptidase {Streptomyce | 96.89 | |
| d1i2sa_ | 255 | beta-Lactamase, class A {Bacillus licheniformis [T | 96.75 | |
| d1xp4a2 | 269 | D,D-carboxypeptidase DacA, N-terminal domain {Stre | 96.73 | |
| d2cc1a1 | 262 | beta-Lactamase, class A {Mycobacterium fortuitum [ | 96.48 | |
| d1djaa_ | 258 | beta-Lactamase, class A {Staphylococcus aureus [Ta | 96.2 | |
| d1e25a_ | 278 | beta-Lactamase, class A {Pseudomonas aeruginosa, P | 96.03 | |
| d1buea_ | 265 | beta-Lactamase, class A {Enterobacter cloacae, NMC | 93.45 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 92.3 | |
| d2olua2 | 400 | Penicillin-binding protein 2, PBP2 {Staphylococcus | 81.68 | |
| d1nrfa_ | 246 | Penicillin receptor BlaR, C-terminal domain {Bacil | 81.59 |
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=1.3e-46 Score=425.42 Aligned_cols=263 Identities=21% Similarity=0.312 Sum_probs=200.0
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCc
Q 002092 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 556 (968)
Q Consensus 477 ~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~L 556 (968)
++...++..+++.++.+ ++|++|+|+++|++++..++|+++.+.++|+++||+|+|||+||+|||+++++|+|+|+|+|
T Consensus 2 ~~~~~i~~~~~~~~~~g-~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 2 DLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp HHHHHHHHHHHHHHTTT-CCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred cHHHHHHHHHHHHHHcC-CCeEEEEEEECCEEEEEEeEEEeccccCCCCCCCCeEEeeehHHHHHHHHHHHHHHcCCCCC
Confidence 56788999999988754 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHHH
Q 002092 557 EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636 (968)
Q Consensus 557 d~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~lL 636 (968)
||||++|+|+++.. ++|||+|||+|||||+++...... .....+..+++++.+...++.++||+.|.|||.||. ||
T Consensus 81 dd~v~~ylp~~~~~--~~iTi~~LL~htSGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll 156 (362)
T d2drwa1 81 DEPITRWFPDLPKA--AQMPVRILLNHRSGLPDFETSMPM-ISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYV-LA 156 (362)
T ss_dssp TSBGGGTCTTSTTG--GGCBGGGGTTTCSCCCCCTTTSBS-SCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHH-HH
T ss_pred Cceeeeeecccccc--ccccccccccccCCCCcccccccc-ccccccchhHHHHhhhccCccccccceeccccccee-cc
Confidence 99999999998753 569999999999999987654332 233457889999999999999999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCC-CCCCCCCCccchhhhhccccccccc
Q 002092 637 GGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPD-LRLPSSFQPDKISQLAAITPAVFNM 715 (968)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (968)
|.|||+++|++|+++++++||+||||++|........... ....+|..... ...+. . . ..............
T Consensus 157 g~iie~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~---~~a~~y~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~ 229 (362)
T d2drwa1 157 GMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIE---REARGYMHAAADDENPQ-W--D-VSGAGDPVDGVWDS 229 (362)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGG---GBCCCEEECBTTCCSCS-S--B-CTTCCCCBTTEEEC
T ss_pred cchhhhccCcchhhhhHHHHHhccCCccccccCccccccc---cccceeecccccccccc-c--c-cccccCcccccccc
Confidence 9999999999999999999999999996533222111111 11111110000 00000 0 0 00000000000000
Q ss_pred cc--ccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 716 LN--IRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 716 ~~--~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
.. ......|+||++||++||+||++++++++.++++
T Consensus 230 ~~~~~~~~~~~aGgl~sta~Dla~~~~~ll~~~~l~~~ 267 (362)
T d2drwa1 230 TEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQK 267 (362)
T ss_dssp TTTSCHHHHGGGTCEEECHHHHHHHHHHHHTTSSSCHH
T ss_pred ccccccccccccCceEcCHHHHHHHHHHHhCCCCCCHH
Confidence 11 1122358899999999999999999999877655
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=3.9e-46 Score=423.73 Aligned_cols=266 Identities=23% Similarity=0.325 Sum_probs=198.4
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+.+.++|++++++.++++.+||++++|+++|+++++.++|+++.+.++|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 2 a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l~ 81 (377)
T d1ci9a_ 2 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELA 81 (377)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSSC
T ss_pred chHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEeeeehHHHHHHHHHHHHHHcCCcc
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccC----CCCCCcHHHHhcCcCCCCCCCCCC----------cCCCCcCCCCHHHHHHHHHccCCCCCC
Q 002092 556 LEENIANIWPEFKSN----GKDLIKVHHVLNHTSGLHNVSVDL----------SSENPLLICDWDECLNRIALSAPETEP 621 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~----~~~~ITlr~LLsHtSGl~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~P 621 (968)
|||||++|||+|... .++.|||||||+||||++++.... .........+.++.++.+...++.++|
T Consensus 82 ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (377)
T d1ci9a_ 82 LDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAP 161 (377)
T ss_dssp TTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSCT
T ss_pred ccccchhhhhhhhcccccccCCceehhhcccccccccccccccchhhhhhhccccccccccCCHHHHHHHHhhCCCcCCC
Confidence 999999999998542 346799999999999999753211 111223356789999999999999999
Q ss_pred CCceeeccCcHHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCC--CCCC---
Q 002092 622 GQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLR--LPSS--- 696 (968)
Q Consensus 622 G~~~~YSn~~y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--- 696 (968)
|+.|.||| +|. +||.|||+++|++|++|++++||+||||++|.... .+.......+....... ....
T Consensus 162 G~~~~Ys~-~~~-lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~------~~~~~~a~~~~~~~~~~~~~~~~~~~ 233 (377)
T d1ci9a_ 162 GSGWQYSL-ALD-VLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVS------AEPERFAVPYHDGQPEPVRMRDGIEV 233 (377)
T ss_dssp TSCCCCCT-HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCC------SCGGGBCCCEECCSSSCEECCTTEEE
T ss_pred CceEeeCc-HHH-HHHHHHhhcccchhhhhhhHHHhhccCCccccccC------ChhhhhhccccccCCccccccccccc
Confidence 99999986 687 99999999999999999999999999999643211 11111111111100000 0000
Q ss_pred CCccchhhhhcccccccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 697 FQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
..+..........+... ........++||++||++||+||+++|++++.+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~ 286 (377)
T d1ci9a_ 234 PLPEGHGAAVRFAPSRV--FEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPE 286 (377)
T ss_dssp ECCTTSCSEEEECGGGG--GCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCH
T ss_pred ccccccccccccCcccc--ccccccccCCccccccHHHHHHHHHHhhhccCCCcH
Confidence 00000000000001111 111122347789999999999999999988766544
|
| >d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., R61 [TaxId: 1931]
Probab=100.00 E-value=8e-46 Score=416.22 Aligned_cols=326 Identities=22% Similarity=0.311 Sum_probs=243.6
Q ss_pred HHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccC
Q 002092 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (968)
Q Consensus 479 ~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~ 558 (968)
.+.++.+++..++++ +||++++|+++|+ ++..++|+++.+.++++++||+|+|||+||+|||+++++|+|+|+|+||+
T Consensus 6 ~~~l~~~~~~~~~~~-~pG~~v~v~~~g~-~~~~~~G~~d~~~~~~~t~~t~f~i~SvsK~~ta~~i~~lv~~G~l~ldd 83 (345)
T d1yqsa1 6 DTGLQAVLHTALSQG-APGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDA 83 (345)
T ss_dssp HHHHHHHHHHHHHTT-CSEEEEEEEETTE-EEEEEEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCTTS
T ss_pred hHHHHHHHHHHHHCC-CCeEEEEEEECCE-EEEEeEEEEeccCCCCCCCCCEEEchhhhHHHHHHHHHHHHHhhcccccc
Confidence 356778888877765 8999999988887 57899999999999999999999999999999999999999999999999
Q ss_pred chhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcC-------CCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCc
Q 002092 559 NIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS-------ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLS 631 (968)
Q Consensus 559 pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~ 631 (968)
||++|+|++... ++|||+|||+|||||+++...... .......+.+++++.+...++.++||+.|.|||.|
T Consensus 84 ~v~~~lp~~~~~--~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~ 161 (345)
T d1yqsa1 84 SVNTYLPGLLPD--DRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTN 161 (345)
T ss_dssp BHHHHSTTCSSC--TTCBHHHHHTTCSCCCCTHHHHTSSHHHHHHHHTTCCCCHHHHHHHHHTSCCSSSTTSCCCCCHHH
T ss_pred chhhcccccCCc--ceEEeeeeccccCCCCcccccchhhccccccccccccCCHHHHHHHHHhcCccCCCCcccccCCcc
Confidence 999999998653 569999999999999986432211 11123567889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccc
Q 002092 632 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 711 (968)
Q Consensus 632 y~~lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (968)
|. |||.|||+++|++|+++++++||+||||+++........... ....++.. +. ......
T Consensus 162 ~~-lLg~iie~vtg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~---~~~~~~~~-~~---------------~~~~~~ 221 (345)
T d1yqsa1 162 FV-VAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPG---THANGYLT-PD---------------EAGGAL 221 (345)
T ss_dssp HH-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBCCTTCCCCCS---SBCCCEEC-CS---------------STTCCC
T ss_pred cc-ccchhhhhccccchHHHHHHHHhhccCCcceeccCchhhhcc---cccccccc-cc---------------cccccc
Confidence 98 999999999999999999999999999995432111110000 00001100 00 000000
Q ss_pred ccccccccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhh
Q 002092 712 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKN 791 (968)
Q Consensus 712 ~~~~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (968)
............|+||++||++||+||+++++++..++.+ .+++|..
T Consensus 222 ~~~~~~~~~~~~~aGgl~st~~Dla~~~~~l~~~~~l~~~---------------------------------~~~~~~~ 268 (345)
T d1yqsa1 222 VDSTEQTVSWAQSAGAVISSTQDLDTFFSALMSGQLMSAA---------------------------------QLAQMQQ 268 (345)
T ss_dssp EECCCCCCTTTGGGTCCEECHHHHHHHHHHHHTTCSSCHH---------------------------------HHHHHTC
T ss_pred cccccccccccCCCcccccCHHHHHHHHHHhhcCCCCCHH---------------------------------HHHHHhh
Confidence 0011111123358899999999999999999988665443 4444410
Q ss_pred cCCCCCCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCCC
Q 002092 792 KTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGD 871 (968)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (968)
|. ..
T Consensus 269 ----------------------------~~-------------------------------------~~----------- 272 (345)
T d1yqsa1 269 ----------------------------WT-------------------------------------TV----------- 272 (345)
T ss_dssp ----------------------------CE-------------------------------------EE-----------
T ss_pred ----------------------------cc-------------------------------------cC-----------
Confidence 00 00
Q ss_pred CCCCCCccccceeeccCCCCCcceeccCC-ccCc--ceeeeCCCCeEEEEEecccCCCCChhHHHHHHHHHh
Q 002092 872 LALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGS--TGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 940 (968)
Q Consensus 872 ~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~G~--~~~~~p~~~~~vv~l~N~~~~~~~~~~i~~~~~~~l 940 (968)
....+||+||++.... .+...++|+| .+|+ .++++|+++++||+++|+.+.....+.+.+.+.+++
T Consensus 273 --~~~~~yG~G~~~~~~~-~g~~~~~H~G~~~G~~s~~~~~p~~~~~iv~l~N~~~~~~~~~~~~~~l~~~~ 341 (345)
T d1yqsa1 273 --NSTQGYGLGLRRRDLS-CGISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESAF 341 (345)
T ss_dssp --ETTEEECSSCEEEECT-TSCEEEEEEEEETTEEEEEEECTTSSEEEEEEESEESCHHHHHHHHHHHHHHH
T ss_pred --CCCCceeEEEEeeccC-CCceEEEecCccCCceEEEEEEEcCCEEEEEEEeCCCChHHHHHHHHHHHHHh
Confidence 0235799999986633 3456799999 6674 458999999999999999776566778888888877
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=7.1e-46 Score=419.57 Aligned_cols=244 Identities=18% Similarity=0.255 Sum_probs=198.7
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
.++.+.+++.+++.++++.+||++|+|+++|++++. .||+++.+.++|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 5 ~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G~l~ 83 (363)
T d1onha_ 5 KQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYY-TFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARGEIS 83 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eEEecccCCCCCCCCCCEEEeeehHHHHHHHHHHHHHhcCcce
Confidence 356777899999999999999999999999999985 7899999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~l 635 (968)
||+||++|+|+|+..++++|||+|||+||||+..+.. +....+.+++++.+.+.++.++||+.|.|||.||. |
T Consensus 84 lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~~------~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~-l 156 (363)
T d1onha_ 84 LDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQV------PDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIG-L 156 (363)
T ss_dssp TTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSSC------CTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-H
T ss_pred eeeccchhhhhcccccccccchhhHhhccccCccccC------ccccCCHHHHHHHHHHhhhhcCCceeeecccccee-h
Confidence 9999999999998777788999999999999865432 23457889999999999999999999999999998 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccccccc
Q 002092 636 CGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNM 715 (968)
Q Consensus 636 Lg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (968)
||.|||+++|++|+++++++||+||||+++........ ..+...+|..... .......
T Consensus 157 lg~iie~~tg~~~~~~~~e~i~~PLgm~~t~~~~~~~~----~~~~a~~~~~~~~------------------~~~~~~~ 214 (363)
T d1onha_ 157 FGALAVKPSGMPYEQAMTTRVLKPLKLDHTWINVPKAE----EAHYAWGYRDGKA------------------VRAVRVS 214 (363)
T ss_dssp HHHHHTGGGTSCHHHHHHHHTTTTTTCTTEESSCCGGG----GGGBCCEEETTEE------------------ECCCCCC
T ss_pred hhhhhhhhcCCChhhhhHHHHHhhcCcccccccCCccc----ccceeeeeecCCc------------------ccceeee
Confidence 99999999999999999999999999996432221111 1111111110000 0000000
Q ss_pred ccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 716 LNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 716 ~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
+ .....++||++||++||+||++++++++.+.+.
T Consensus 215 ~--~~~~~~aggl~st~~Dla~~~~~~l~~~~~~~~ 248 (363)
T d1onha_ 215 P--GMLDAQAYGVKTNVQDMANWVMANMAPENVADA 248 (363)
T ss_dssp S--STTHHHHHCCEECHHHHHHHHHHHHCGGGCCSH
T ss_pred c--ccccccccceeeCHHHHHHHHHHhhcCCCCCch
Confidence 0 011237889999999999999999999887765
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=5.6e-46 Score=419.52 Aligned_cols=241 Identities=20% Similarity=0.251 Sum_probs=199.2
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+.+.+.+++.+++.++++.+||++|+|+++|++++ .+||+++..+++|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 3 ~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~-~~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l~ 81 (358)
T d2hdsa1 3 QQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYY-FTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIK 81 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEE-EEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEE-EeEEeeccccCCCCCCCCEEeccchHHHHHHHHHHHHHhcCCcc
Confidence 35667899999999999999999999999999998 46899999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCCCcCCCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHHH
Q 002092 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635 (968)
Q Consensus 556 Ld~pv~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~l 635 (968)
||+||++|+|++....+++|||||||+||||+..+.. +....+.+++++.+...++.++||+.|.|||.+|. |
T Consensus 82 ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-l 154 (358)
T d2hdsa1 82 LSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQV------PDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG-L 154 (358)
T ss_dssp TTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSSC------CTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-H
T ss_pred cchhhhhhcccccccccchhhhhhhcccCcCCCchhh------cccccccHHHHHHHhhCccccCCCceeEecccccc-c
Confidence 9999999999998777789999999999999876432 23457889999999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhccccccccc
Q 002092 636 CGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNM 715 (968)
Q Consensus 636 Lg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (968)
||.|||++||++|+++++++||+||||++|......... .....++. +. ......
T Consensus 155 lg~iie~~tg~~~~~~~~~~i~~PLgm~~T~~~~~~~~~----~~~~~~~~--~~------------------~~~~~~- 209 (358)
T d2hdsa1 155 FGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEE----KNYAWGYR--EG------------------KAVHVS- 209 (358)
T ss_dssp HHHHHTGGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGG----GGBCCEEE--TT------------------EEECCC-
T ss_pred cchhhhcccCCChhhhhhhHHHhhcCcccccCCCChhHh----cccccccc--cC------------------cccccc-
Confidence 999999999999999999999999999964322221110 00011110 00 000000
Q ss_pred ccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 716 LNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 716 ~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
......++||++||++||+||++++++++.++++
T Consensus 210 --~~~~~~~aggl~st~~Dla~f~~~~l~~~~~~~~ 243 (358)
T d2hdsa1 210 --PGALDAEAYGVKSTIEDMARWVQSNLKPLDINEK 243 (358)
T ss_dssp --CCTTHHHHTCCEECHHHHHHHHHHHHCGGGCSSH
T ss_pred --cccccCCCcceecCHHHHHHHHHHHhCCCCCChH
Confidence 0112247899999999999999999999988776
|
| >d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-aminopeptidase, N-terminal domain species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=1.6e-45 Score=411.61 Aligned_cols=321 Identities=20% Similarity=0.239 Sum_probs=238.3
Q ss_pred HHHHHHHHHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCc
Q 002092 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (968)
Q Consensus 480 ~~l~~~l~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~p 559 (968)
+.+++++++.+++..+||++|+|+++|+++++.+||+++...+.|+++||+|+|||+||+|||+++++|+|+|+| ||+|
T Consensus 5 ~~l~~~~~~~~~~~~~PG~sv~V~~~g~~v~~~~~G~~d~~~~~~~~~dt~f~i~SvsK~~ta~~v~~lv~~G~l-ldd~ 83 (333)
T d1ei5a3 5 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEPEL-LDDA 83 (333)
T ss_dssp HHHHHHHHTHHHHSCSSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSGGG-GHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEeEeeeccccCCCCCCCCEEeeeehHHHHHHHHHHHHHhcCCC-ccch
Confidence 467888889999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred hhhhcccCccCCCCCCcHHHHhcCcCCCCCCCCC--CcCCCCcCCCCHHHHHHHHHcc-CCCCCCCCceeeccCcHHHHH
Q 002092 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD--LSSENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 636 (968)
Q Consensus 560 v~~ylP~~~~~~~~~ITlr~LLsHtSGl~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-~~~~~PG~~~~YSn~~y~~lL 636 (968)
|.+|+|+++ .++|||+|||+|||||+++... .....+.......+....+... ++.++||+.|.|||.||. ||
T Consensus 84 v~~~lp~~~---~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-lL 159 (333)
T d1ei5a3 84 LEAYLDKFE---DERPAVRDLCNNQSGLRDYWALSVLCGADPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFR-IL 159 (333)
T ss_dssp HHHHTTTCC---SCCCCHHHHHTTCSCCCCHHHHHHHTTCCTTCCBCHHHHHHHHHTCCCCSSCTTSSCCCCHHHHH-HH
T ss_pred hhhhccccc---hhhhhhccccccCCCCcccccccccccccccccchhhhHHHHHHhcCCCcCCCCceeecccchhH-HH
Confidence 999999986 3569999999999999975321 1123334456666777777665 457899999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccccccc
Q 002092 637 GGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNML 716 (968)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (968)
|.|||+++|++|+++++++||+||||+++.. ..+........++..... ......
T Consensus 160 g~iie~~tg~~~~~~~~~~i~~PLgm~~t~~-----~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 214 (333)
T d1ei5a3 160 ADLIEAHTGRTLVDILSERIFAPAGMKRAEL-----ISDTALFDECTGYEGDTV--------------------RGFLPA 214 (333)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCTTCEE-----CCBGGGCCSSCCEEEETT--------------------TEEEEC
T ss_pred HHhhhhhcCCccchhhhhhhcCccCccceec-----cCchhhcccccccccccc--------------------cccccc
Confidence 9999999999999999999999999995421 111111111111111000 000111
Q ss_pred cccccccCccceecCHHHHHHHHHHHHcCCCCCCCCccCCCCCCCCCCCCCCCCCcccchhccchhHHHHHHHhhcCCCC
Q 002092 717 NIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNS 796 (968)
Q Consensus 717 ~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (968)
.......|+||++||++||+||++++.++...+.. ++++|.
T Consensus 215 ~~~~~~~gaggl~sta~Dla~~~~~l~~~~~~~~~---------------------------------~~~~~~------ 255 (333)
T d1ei5a3 215 TNRIQWMGDAGICASLNDMIAWEQFIDATRDDESG---------------------------------LYRRLS------ 255 (333)
T ss_dssp CCCBBCCSSSCEEECHHHHHHHHHHHHHTTTCTTS---------------------------------HHHHHS------
T ss_pred cccccccccCceeecHHHHHHHHHHhhcCCCCcHH---------------------------------Hhhhhc------
Confidence 11233458899999999999999999877655444 333330
Q ss_pred CCCcccccccCCCCcccccccchhhhhhhccccCCCCCCCcCCCCCCCCCCccccccccCCcccccccCCCCCCCCCCCC
Q 002092 797 EHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPN 876 (968)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (968)
. ..+ . . ....
T Consensus 256 -------------------------~---~~~-------------------~-----------~------------~~~~ 265 (333)
T d1ei5a3 256 -------------------------G---PQT-------------------F-----------K------------DGVA 265 (333)
T ss_dssp -------------------------S---CCB-------------------C-----------T------------TSCB
T ss_pred -------------------------c---ccc-------------------c-----------c------------cccc
Confidence 0 000 0 0 0012
Q ss_pred CccccceeeccCCCCCcceeccCC-ccCcc--eeeeCCCCeEEEEEecccCCCCChhHHHHHHHHHh-CCCC
Q 002092 877 GRFGLGFKRYNTRDGSYIGFGHSG-MGGST--GFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL-NLPV 944 (968)
Q Consensus 877 ~~~glG~~~~~~~~~~~~~~gh~G-~~G~~--~~~~p~~~~~vv~l~N~~~~~~~~~~i~~~~~~~l-~~~~ 944 (968)
..||+||++.. ..+...++|+| .+|+. .+++|+.+++||+++|..+ . ...+...|.+.+ |++.
T Consensus 266 ~~yG~G~~~~~--~~g~~~~gH~G~~~G~~s~~~~~p~~~~~vvvltN~~~--~-~~~~~~~l~~~~~g~~~ 332 (333)
T d1ei5a3 266 APYGFGLNLHE--TGGKRLTGHGGALRGWRCQRWHCADERLSTIAMFNFEG--G-ASEVAFKLMNIALGVSS 332 (333)
T ss_dssp CSEETTEEEEE--ETTEEEEEEEEEETTEEEEEEEEGGGTEEEEEEESBSS--C-HHHHHHHHHHHHHTCCC
T ss_pred CceeeeeEEee--cCCeeEEEeCCcCCCceEEEEEEecCCeEEEEEEeCCC--C-HHHHHHHHHHHHcCCCC
Confidence 57999999876 44566799999 56644 4889999999999999854 2 334555555544 7764
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=3.6e-38 Score=358.47 Aligned_cols=207 Identities=18% Similarity=0.182 Sum_probs=164.0
Q ss_pred HHhccCCCccceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchhhhccc
Q 002092 487 VELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPE 566 (968)
Q Consensus 487 ~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ylP~ 566 (968)
++.+++..+.| ++|+++|+++++.|+| ..++||+|.++|+||+||++++++|+++|+|+||+||.+|+|+
T Consensus 70 ~~~l~~~~t~a--~lV~~~G~iv~E~y~~--------~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~~ylPe 139 (388)
T d2dcfa1 70 EQRLEQTYTDA--FLVLRGTEVVAEYYRA--------GFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPE 139 (388)
T ss_dssp HHHHHHTTEEE--EEEEETTEEEEEEECT--------TCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGG
T ss_pred HHHHHhcCCcE--EEEEECCEEEEEEecC--------CCCcccchhHHHHHHHHHHHHHHHHHhcCcccccCcccccchh
Confidence 33444344444 6888999999999986 5689999999999999999999999999999999999999999
Q ss_pred CccCCCCCCcHHHHhcCcCCCCCCCCCCcC------------CCCcCCCCHHHHHHHHHccCCCCCCCCceeeccCcHHH
Q 002092 567 FKSNGKDLIKVHHVLNHTSGLHNVSVDLSS------------ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (968)
Q Consensus 567 ~~~~~~~~ITlr~LLsHtSGl~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~PG~~~~YSn~~y~~ 634 (968)
|+...+++|||+|||+||||++........ ..+.......++...+...+.. .||+.|.|+|.++.
T Consensus 140 ~~~~~~~~iTi~~LL~mtsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~pg~~f~Y~~~~~~- 217 (388)
T d2dcfa1 140 LAGSVYDGPSVLQVLDMQISIDYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGD-GSTGEFQYCSANTD- 217 (388)
T ss_dssp GTTSTTSSCBHHHHHTTCBCCSCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCC-SCBSSCCCCHHHHH-
T ss_pred hcccccchhhHHHhhhcccCCccccccccccchhhhhhhhhhcccccccchHHHHHHHhccCcC-CCCCEEEEecCCHH-
Confidence 998888899999999999999875432211 1111122334556665555544 56668999999998
Q ss_pred HHHHHHHHHhCCCHHHHHHHHchhccCCCCCCCcccccccCcccccccccCCCCCCCCCCCCCCccchhhhhcccccccc
Q 002092 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFN 714 (968)
Q Consensus 635 lLg~iiE~vtG~~~~~~l~~~If~PLGm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (968)
+||.|||++||++|.++++++||+||||+++. ... .
T Consensus 218 lLg~iie~~tG~~~~~~~~e~i~~PlGm~~~~-----~~~------------~--------------------------- 253 (388)
T d2dcfa1 218 VLAWIVERVTGLRYVEALSTYLWAKLDADRDA-----TIT------------V--------------------------- 253 (388)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHTGGGTTCSSCC-----EEC------------B---------------------------
T ss_pred HHHHHHHHhcCccchhhhhhhccCcccccccc-----ccc------------c---------------------------
Confidence 99999999999999999999999999998421 000 0
Q ss_pred cccccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002092 715 MLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 751 (968)
Q Consensus 715 ~~~~~~~~~~agG~~sTa~Dlak~~~~ll~gg~~~~~ 751 (968)
...+...++||+++|++||+||+++++++|.++++
T Consensus 254 --~~~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~ 288 (388)
T d2dcfa1 254 --DTTGFGFANGGVSCTARDLARVGRMMLDGGVAPGG 288 (388)
T ss_dssp --CTTCCBCTTTCEEECHHHHHHHHHHHHTTTEETTE
T ss_pred --cccCcccccchhhhcccchhHHHHHHHhCCccCCc
Confidence 00123347899999999999999999999999887
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.77 E-value=4.5e-19 Score=180.05 Aligned_cols=150 Identities=17% Similarity=0.213 Sum_probs=98.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
++||+|++|+||+|+..+|++||||+++++...... .+..+. ..-.....+ .......|.+
T Consensus 6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~--~~~~~~-----------~~~~~~~~~------~~~~~~~e~~ 66 (191)
T d1zara2 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKK--VKEKRD-----------YGDLHFSVL------AIRSARNEFR 66 (191)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------C--CCC------------------CHHHH------HHHHHHHHHH
T ss_pred CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhh--hhhhhh-----------hccHHHHHH------HHHHHHHHHH
Confidence 589999999999999999999999999987542100 000000 000000011 1112334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (968)
++.++. .+.+|+.+.....+|+|||++|.++.++. ......++..+++. +.++|
T Consensus 67 ~l~~l~--------------------~~~v~~~~~~~~~~lvme~~~~~~~~~l~-----~~~~~~i~~ql~~~-l~~lH 120 (191)
T d1zara2 67 ALQKLQ--------------------GLAVPKVYAWEGNAVLMELIDAKELYRVR-----VENPDEVLDMILEE-VAKFY 120 (191)
T ss_dssp HHHHTT--------------------TSSSCCEEEEETTEEEEECCCCEEGGGCC-----CSCHHHHHHHHHHH-HHHHH
T ss_pred HHHHcc--------------------CCCcceEEEecCCEEEEEeeccccccchh-----hHHHHHHHHHHHHH-HHHHh
Confidence 655542 34577777766779999999997765431 12345566666655 67899
Q ss_pred hcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|++||||||+|||+++ +.++|||||++...+..
T Consensus 121 ~~giiHrDiKP~NILv~~---~~~~liDFG~a~~~~~~ 155 (191)
T d1zara2 121 HRGIVHGDLSQYNVLVSE---EGIWIIDFPQSVEVGEE 155 (191)
T ss_dssp HTTEECSCCSTTSEEEET---TEEEECCCTTCEETTST
T ss_pred hCCEEEccCChhheeeeC---CCEEEEECCCcccCCCC
Confidence 999999999999999984 46999999999887644
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.6e-17 Score=179.47 Aligned_cols=150 Identities=14% Similarity=0.136 Sum_probs=105.7
Q ss_pred ccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhh
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (968)
+++.|+-. +.||+|+||.||+|+. .+|+.||||+.+....+.+
T Consensus 10 p~d~Y~i~--~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~---------------------------------- 53 (288)
T d2jfla1 10 PEDFWEII--GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL---------------------------------- 53 (288)
T ss_dssp GGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGG----------------------------------
T ss_pred cccCeEEe--EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHH----------------------------------
Confidence 44555433 4699999999999997 4799999999764322110
Q ss_pred hhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHH
Q 002092 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (968)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (968)
-.|.+|++.+.++.+ ..-|.+=.++. ....+|||||++|++|.++..-....++...+.
T Consensus 54 ---~~~~~E~~il~~l~H-----------------pnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~ 113 (288)
T d2jfla1 54 ---EDYMVEIDILASCDH-----------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ 113 (288)
T ss_dssp ---GGTHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHH
T ss_pred ---HHHHHHHHHHHhCCC-----------------CCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHH
Confidence 135567776665532 11222333333 456689999999999987643333456766665
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+.+++ +..+|..|++|||+||+|||++.+ |+++|+|||+++.+...
T Consensus 114 ~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~--~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 114 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNTRT 163 (288)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECHHH
T ss_pred HHHHHHHHHHHHHHHCCEEEeecChhheeECCC--CCEEEEechhhhccCCC
Confidence 5555554 788999999999999999999965 89999999999876543
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.7e-17 Score=178.13 Aligned_cols=146 Identities=14% Similarity=0.173 Sum_probs=102.7
Q ss_pred cccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhh
Q 002092 115 GGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (968)
Q Consensus 115 ~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (968)
.+-|..+ +.||+|++|.||+|+. .+|+.||||+.+..-... . +
T Consensus 19 ~~~Y~~~--~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~----~-----------------------~------- 62 (293)
T d1yhwa1 19 KKKYTRF--EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----K-----------------------E------- 62 (293)
T ss_dssp TTTBCSC--EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC----H-----------------------H-------
T ss_pred ccccEEE--EEEecCcCcEEEEEEECCCCCEEEEEEEecccChH----H-----------------------H-------
Confidence 3445444 4699999999999997 589999999875321100 0 0
Q ss_pred hccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHH
Q 002092 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (968)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (968)
.+.+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++. ....++...+..
T Consensus 63 ---~~~~E~~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~--~~~~l~~~~~~~ 120 (293)
T d1yhwa1 63 ---LIINEILVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAA 120 (293)
T ss_dssp ---HHHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHH--HHSCCCHHHHHH
T ss_pred ---HHHHHHHHHHhCCC-----------------CCEeeEeEEEEECCEEEEEEEecCCCcHHHHh--hccCCCHHHHHH
Confidence 13456665555422 11122222332 45568999999999987753 345677766666
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+.+++ +..+|..|++|||+||.|||++.+ |+++|+|||+++.+..
T Consensus 121 i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~--~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (293)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHHHCCCcccCCcHHHeEECCC--CcEeeccchhheeecc
Confidence 666655 888999999999999999999865 8999999999988754
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.67 E-value=1.9e-17 Score=184.01 Aligned_cols=150 Identities=21% Similarity=0.307 Sum_probs=102.7
Q ss_pred cccccc-cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhh
Q 002092 117 MFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (968)
Q Consensus 117 ~f~~~d-~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (968)
+|..++ .+.||+|+||.||+|+. .+|+.||||+.+..... |.+
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~----~~~------------------------------- 71 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL----DKY------------------------------- 71 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----HHH-------------------------------
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchh----HHH-------------------------------
Confidence 444444 36899999999999997 58999999987643211 000
Q ss_pred ccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
.+.+|++.+.++.+ ..-+.+-.++. ....+||||||+|++|.+........++...+...
T Consensus 72 --~~~~Ei~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i 132 (352)
T d1koba_ 72 --TVKNEISIMNQLHH-----------------PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY 132 (352)
T ss_dssp --HHHHHHHHHTTCCS-----------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHH
T ss_pred --HHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHH
Confidence 12345555544321 11122323333 45568999999999886643222334666666665
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|..|++|||+||+|||++...+++++|+|||+++.+..
T Consensus 133 ~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 133 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC
Confidence 55555 888999999999999999999854458999999999988764
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3.7e-17 Score=179.48 Aligned_cols=150 Identities=16% Similarity=0.258 Sum_probs=105.0
Q ss_pred ccccccc-cccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhh
Q 002092 116 GMFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (968)
Q Consensus 116 ~~f~~~d-~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (968)
|+|+.+. .+.||+|+||+||+|+.+ +|+.||||+.+..-.+.
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~------------------------------------ 45 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ------------------------------------ 45 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH------------------------------------
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccH------------------------------------
Confidence 4555444 368999999999999974 79999999986432110
Q ss_pred hccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHH
Q 002092 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (968)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (968)
..+.+|.+.+.++++ ..-+.+-.++. .+..+||||||+|.+|.+........++...+..
T Consensus 46 --~~~~~Ei~il~~l~H-----------------pnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~ 106 (321)
T d1tkia_ 46 --VLVKKEISILNIARH-----------------RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVS 106 (321)
T ss_dssp --HHHHHHHHHHHHSCC-----------------TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHH
T ss_pred --HHHHHHHHHHHhCCC-----------------CCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHH
Confidence 013346555554432 11233334444 5667999999999988765432222466766666
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+.+++ +..+|..|++||||||.|||++.++.++++|+|||++..+..
T Consensus 107 i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 555555 888999999999999999999865456899999999987653
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=5.4e-17 Score=173.94 Aligned_cols=140 Identities=21% Similarity=0.242 Sum_probs=100.4
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|+||.||+|++++++.||||+.+.+.... + .|.+|++
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~----------------------------~----------~~~~E~~ 60 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------------------------D----------AFLAEAN 60 (272)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH----------------------------H----------HHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCEEEEEEEccCcCCH----------------------------H----------HHHHHHH
Confidence 5799999999999999889999999876432100 0 2456777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHH-HhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++. .-|.+-.+......+|||||++|++|.+.... ....++...+...+.++. +.
T Consensus 61 ~l~~l~Hp-----------------nIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ 123 (272)
T d1qpca_ 61 LMKQLQHQ-----------------RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123 (272)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC-----------------CEeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 76665321 11222222224566899999999998764322 223466666665555554 78
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+|..|++|||+||.||||+.+ +.++|+|||+++.+..
T Consensus 124 ~lH~~~ivHrDiKp~NIll~~~--~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 124 FIEERNYIHRDLRAANILVSDT--LSCKIADFGLARLIED 161 (272)
T ss_dssp HHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHhCCcccCccchhheeeecc--cceeeccccceEEccC
Confidence 8999999999999999999865 8999999999987753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=4e-17 Score=174.15 Aligned_cols=141 Identities=20% Similarity=0.196 Sum_probs=95.5
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|+||+||+|++++++.||||+.+.+... +-+|.+|++
T Consensus 11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~--------------------------------------~~~~~~E~~ 52 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--------------------------------------EEDFIEEAE 52 (263)
T ss_dssp EEEECCSSCCEEEEEETTTEEEEEEECCSSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc--------------------------------------HHHHHHHHH
Confidence 569999999999999999999999987653211 012556777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++. .-+.+=.++. ....+|||||++|++|.+.........+...+...+.++. +.
T Consensus 53 ~l~~l~Hp-----------------nIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~ 115 (263)
T d1sm2a_ 53 VMMKLSHP-----------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115 (263)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------------CcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 77765431 1122222222 4667899999999999876432333455555444444443 77
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 116 ~lH~~~iiHrDlKp~Nill~~~--~~~Kl~DFGla~~~~~~ 154 (263)
T d1sm2a_ 116 YLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDD 154 (263)
T ss_dssp HHHHTTCCCTTCSGGGEEECGG--GCEEECSCC--------
T ss_pred hhhccceeecccchhheeecCC--CCeEecccchheeccCC
Confidence 8999999999999999999976 89999999999876543
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=7.5e-17 Score=171.90 Aligned_cols=143 Identities=17% Similarity=0.118 Sum_probs=98.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+.+ +|+.||||+.++.....- ..+-.+.+|+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~----------------------------------~~~~~~~~E~ 57 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------------------------------GVEHQLRREV 57 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------------------------------TCHHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccCh----------------------------------HHHHHHHHHH
Confidence 68999999999999984 799999998763211000 0011234565
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+=.++. ...-+|||||++|++|.+... ....++...+...+.+++ +
T Consensus 58 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~-~~~~l~e~~~~~i~~qi~~al 119 (263)
T d2j4za1 58 EIQSHLRH-----------------PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANAL 119 (263)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 11122223333 455679999999999877643 234566666655555554 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||+|||++.+ +.++|+|||++...+.
T Consensus 120 ~~lH~~~ivHrDiKp~Nill~~~--~~~kl~DFG~a~~~~~ 158 (263)
T d2j4za1 120 SYCHSKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPS 158 (263)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCSCSCCCC
T ss_pred HHHHHCCeeeeeeccccceecCC--CCEeecccceeeecCC
Confidence 88999999999999999999865 8999999999987754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.65 E-value=5.5e-17 Score=180.15 Aligned_cols=143 Identities=22% Similarity=0.328 Sum_probs=101.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+....... +.+ .+.+|+
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~----~~~---------------------------------~~~~E~ 74 (350)
T d1koaa2 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DKE---------------------------------TVRKEI 74 (350)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH----HHH---------------------------------HHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEcccchh----hHH---------------------------------HHHHHH
Confidence 6799999999999997 48999999987643211 100 134566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....+|||||++|++|.+........++...+...+.+++ +
T Consensus 75 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL 137 (350)
T d1koaa2 75 QTMSVLRH-----------------PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137 (350)
T ss_dssp HHHHHTCC-----------------TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 66666532 11223333333 5667899999999998765422233466666665555554 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++||||||+|||++.+.++.++|+|||+++.++.
T Consensus 138 ~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 138 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred HHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence 88999999999999999999865558899999999988764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=8.1e-17 Score=172.36 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=98.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+..-... ..-++.+|+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~------------------------------------~~~~~~~Ei 54 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 54 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch------------------------------------HHHHHHHHH
Confidence 5799999999999997 479999999875321100 001355676
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+=..+. .+..+|||||++|++|.+... ....++...+...+.+++ +
T Consensus 55 ~~l~~l~H-----------------pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~i~~qi~~al 116 (271)
T d1nvra_ 55 CINKMLNH-----------------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGV 116 (271)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEeeeeccCceeEEEEeccCCCcHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 66655432 11122222332 455679999999999988743 223456555555555544 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||+|||++.+ ++++|+|||+++.+..
T Consensus 117 ~ylH~~~IiHrDiKp~NILl~~~--~~~KL~DFG~a~~~~~ 155 (271)
T d1nvra_ 117 VYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRY 155 (271)
T ss_dssp HHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECEE
T ss_pred HHHHHcCCccCcccHHHEEECCC--CCEEEccchhheeecc
Confidence 88999999999999999999865 8999999999987643
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.1e-17 Score=173.04 Aligned_cols=146 Identities=17% Similarity=0.221 Sum_probs=100.8
Q ss_pred ccccccccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhcc
Q 002092 120 DFVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (968)
Q Consensus 120 ~~d~~plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (968)
.++++.||+|+||+||+|+++ +++.||||+.+....+. +.. -
T Consensus 9 ~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~-----------------------------~~~------~ 53 (277)
T d1xbba_ 9 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-----------------------------ALK------D 53 (277)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C-----------------------------HHH------H
T ss_pred eecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCH-----------------------------HHH------H
Confidence 456678999999999999864 45789999986432110 000 0
Q ss_pred CcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
.|.+|++.+.++++ ..-|.+-.++.....+|||||++|++|.++.. ....++...+...+.+
T Consensus 54 ~~~~E~~il~~l~H-----------------pnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~-~~~~l~~~~~~~i~~q 115 (277)
T d1xbba_ 54 ELLAEANVMQQLDN-----------------PYIVRMIGICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQ 115 (277)
T ss_dssp HHHHHHHHHHTCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-----------------CCCceEEEEeccCCEEEEEEcCCCCcHHHHHh-hccCCCHHHHHHHHHH
Confidence 24567766665532 11122222333456689999999999987643 2334666666666665
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 116 i~~gl~ylH~~~iiHrDlKp~Nill~~~--~~~kl~DFGla~~~~~ 159 (277)
T d1xbba_ 116 VSMGMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 159 (277)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHhhHHhCCcccCCCcchhhccccc--Ccccccchhhhhhccc
Confidence 55 888999999999999999999976 8999999999987653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.63 E-value=1.4e-16 Score=172.15 Aligned_cols=140 Identities=20% Similarity=0.181 Sum_probs=98.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+++ +|+.||||+.+.+..+ .+ +|.+|+
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~----------------------------~~----------~~~~E~ 64 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKEA 64 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC----------------------------HH----------HHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCccch----------------------------HH----------HHHHHH
Confidence 67999999999999985 6899999987643211 00 245677
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH-hcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (968)
+.+.++++- .-|.+=.++. ....+|||||++|++|.+..... ...++...+...+.++.
T Consensus 65 ~il~~l~Hp-----------------nIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~g 127 (287)
T d1opja_ 65 AVMKEIKHP-----------------NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 127 (287)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 776665321 1122222222 45678999999999887764321 12345555555444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.++.
T Consensus 128 L~yLH~~~iiHrDlKp~NILl~~~--~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 128 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 167 (287)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCCCTTTCCS
T ss_pred HHHHHHCCcccCccccCeEEECCC--CcEEEccccceeecCC
Confidence 888999999999999999999866 8999999999987654
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.63 E-value=4.1e-16 Score=167.36 Aligned_cols=150 Identities=17% Similarity=0.190 Sum_probs=104.8
Q ss_pred cccccccceeEEEEEEe-CCCCEEEEEEecCChhhhh-HhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTII-LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 123 ~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
.+.||+|++|+||+|+. .+|+.||||+.+....... ..+.+ +..+ .+.+
T Consensus 8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~-----------------------~~~~------~~~~ 58 (277)
T d1phka_ 8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ-----------------------ELRE------ATLK 58 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHH-----------------------HHHH------HHHH
T ss_pred ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHH-----------------------HHHH------HHHH
Confidence 36799999999999997 4899999999764322111 11111 1111 2445
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
|+..+.++... ..-+.+-.++. ...-+|||||++|++|.+... ....++...+...+.+++
T Consensus 59 E~~~l~~l~~h----------------pnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~-~~~~l~e~~~~~~~~qi~~ 121 (277)
T d1phka_ 59 EVDILRKVSGH----------------PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLE 121 (277)
T ss_dssp HHHHHHHHTTC----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC----------------CCeEEEEeecccCcceEEEEEcCCCchHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 77777776421 01122333333 344589999999999988764 344567666666665555
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ +.++|+|||+++.+++
T Consensus 122 al~~lH~~~ivHrDlkp~Nill~~~--~~~kl~DFG~a~~~~~ 162 (277)
T d1phka_ 122 VICALHKLNIVHRDLKPENILLDDD--MNIKLTDFGFSCQLDP 162 (277)
T ss_dssp HHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHHcCCcccccccceEEEcCC--CCeEEccchheeEccC
Confidence 888999999999999999999865 8999999999988765
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.8e-16 Score=171.00 Aligned_cols=141 Identities=21% Similarity=0.250 Sum_probs=100.2
Q ss_pred cccccceeEEEEEEeC---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 125 plgsaSigqV~~A~l~---~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
.||+|+||.||+|+.+ ++..||||+.+++..+. +. -+|.+|
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~---~~---------------------------------~~~~~E 59 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---DT---------------------------------EEMMRE 59 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---HH---------------------------------HHHHHH
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHH---HH---------------------------------HHHHHH
Confidence 4999999999999864 45689999987654321 00 025567
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
++.+.++++- .-|.+-.++.....+|||||++|++|.++.......++...+...+.++. +
T Consensus 60 ~~il~~l~Hp-----------------nIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL 122 (285)
T d1u59a_ 60 AQIMHQLDNP-----------------YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 122 (285)
T ss_dssp HHHHHHCCCT-----------------TBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCC-----------------CEeeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHH
Confidence 7777665321 11222222335567899999999999876432233466666666666655 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 123 ~ylH~~~iiHrDlKp~Nill~~~--~~~Kl~DFGla~~~~~ 161 (285)
T d1u59a_ 123 KYLEEKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALGA 161 (285)
T ss_dssp HHHHHTTEECCCCSGGGEEEEET--TEEEECCCTTCEECTT
T ss_pred HHHHhCCeecCcCchhheeeccC--Cceeeccchhhhcccc
Confidence 88999999999999999999976 8999999999987653
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2e-16 Score=170.54 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=100.0
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|+||+||+|+++++++||||+.+.+-.. +-+|.+|+.
T Consensus 23 ~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~--------------------------------------~~~~~~E~~ 64 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 64 (285)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--------------------------------------HHHHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCEEEEEEECcccCC--------------------------------------HHHHHHHHH
Confidence 689999999999999998889999987643211 012556777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++. .-|.+=..+...+.+|||||++|+++.+...... ..++...+...+.++. +.
T Consensus 65 ~l~~l~h~-----------------nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~ 127 (285)
T d1fmka3 65 VMKKLRHE-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 127 (285)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcccC-----------------CEeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHH
Confidence 77765431 1122212222566799999999998876644332 3466666666666655 88
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.+|..|++|||+||.||||+.+ +.++|+|||+++.+.+.
T Consensus 128 ~LH~~~ivH~DlKp~NIll~~~--~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 128 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDN 166 (285)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCCCTTC-----
T ss_pred HHhhhheecccccceEEEECCC--CcEEEcccchhhhccCC
Confidence 8999999999999999999866 89999999999877543
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.62 E-value=2.2e-16 Score=172.14 Aligned_cols=152 Identities=16% Similarity=0.136 Sum_probs=104.1
Q ss_pred CccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
++++.|..+ +.||+|+||.||+|+. .+|+.||||+.+......- +..+
T Consensus 12 dp~~~y~~l--~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~----------------------------~~~~- 60 (309)
T d1u5ra_ 12 DPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN----------------------------EKWQ- 60 (309)
T ss_dssp CHHHHEEEE--EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHH----------------------------HHHH-
T ss_pred CcHHhcEee--EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCH----------------------------HHHH-
Confidence 456666555 4699999999999997 5899999999765422110 0000
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (968)
++.+|++.+.++++ ..-|.+-.++. ....+|||||++|.++.... .....++...+
T Consensus 61 -----~~~~Ei~il~~l~H-----------------pnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~-~~~~~l~e~~~ 117 (309)
T d1u5ra_ 61 -----DIIKEVRFLQKLRH-----------------PNTIQYRGCYLREHTAWLVMEYCLGSASDLLE-VHKKPLQEVEI 117 (309)
T ss_dssp -----HHHHHHHHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHH-HHTSCCCHHHH
T ss_pred -----HHHHHHHHHHHCCC-----------------CCEeeEEEEEEECCEEEEEEEecCCCchHHHH-HhCCCCCHHHH
Confidence 13456555554422 11233333333 45568999999998875432 23445676666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.....
T Consensus 118 ~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~--~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSSS
T ss_pred HHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC--CCEEEeecccccccCC
Confidence 65555554 888999999999999999999965 8999999999987654
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=1.3e-16 Score=171.37 Aligned_cols=139 Identities=15% Similarity=0.201 Sum_probs=95.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|+||.||+|+++ ..||||+.+......- + .+ .|.+|++
T Consensus 14 ~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~--~-----------------------~~----------~~~~E~~ 56 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ--Q-----------------------LQ----------AFKNEVG 56 (276)
T ss_dssp SEEEECSSCEEEEEESS--SEEEEEECCCSSCCTT--H-----------------------HH----------HHHHHHH
T ss_pred EEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHH--H-----------------------HH----------HHHHHHH
Confidence 57999999999999864 4699999864321100 0 00 2455666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
.+.++++ +++ -+++. ....+|||||++|++|.+........++...+...+.++.
T Consensus 57 ~l~~l~H------------------pnI--v~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~g 116 (276)
T d1uwha_ 57 VLRKTRH------------------VNI--LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116 (276)
T ss_dssp HHTTCCC------------------TTB--CCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------CCE--eeeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 6655432 221 12332 4567899999999999876432333466666666555554
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.++..
T Consensus 117 l~yLH~~~ivHrDlKp~NiLl~~~--~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 117 MDYLHAKSIIHRDLKSNNIFLHED--LTVKIGDFGLATVKSRW 157 (276)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEETT--SSEEECCCCCSCC----
T ss_pred HHHHhcCCEeccccCHHHEEEcCC--CCEEEccccceeecccc
Confidence 888999999999999999999965 89999999999877643
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2.5e-16 Score=170.00 Aligned_cols=146 Identities=16% Similarity=0.128 Sum_probs=97.7
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+|+.||||+.+.... ..+- .. -.+.+|.
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~---------------------~~----------~~~~~E~ 59 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHI---IKEN---------------------KV----------PYVTRER 59 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH---HHTT---------------------CH----------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc---cCHH---------------------HH----------HHHHHHH
Confidence 5799999999999997 4899999998753210 0000 00 0134566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+=..+. ....+|||||++|++|.+... ....++...+...+.+++ +
T Consensus 60 ~il~~l~H-----------------pnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~-~~~~l~e~~~~~~~~qi~~al 121 (288)
T d1uu3a_ 60 DVMSRLDH-----------------PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSAL 121 (288)
T ss_dssp HHHHHCCS-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCeeEEEEEEEECCEEEEEEEccCCCCHHHhhh-ccCCCCHHHHHHHHHHHHHHH
Confidence 66655432 01122222222 345689999999999877643 234566655555444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHHH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (968)
..+|..|++|||+||+|||++.+ |.++|+|||+++.++....
T Consensus 122 ~ylH~~~iiHrDiKp~NIll~~~--~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 122 EYLHGKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp HHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECC----
T ss_pred HhhccccEEcCcCCccccccCCC--ceEEecccccceecccCCc
Confidence 78999999999999999999865 8999999999998875443
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.62 E-value=2.1e-16 Score=172.18 Aligned_cols=153 Identities=18% Similarity=0.171 Sum_probs=95.2
Q ss_pred CccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
++.+.|+-. +.||+|+||.||+|+.+ +|+.||||+........
T Consensus 6 di~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~---------------------------------- 49 (307)
T d1a06a_ 6 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG---------------------------------- 49 (307)
T ss_dssp CGGGTEEEE--EESBSGGGGGEEEEEETTTCCEEEEEEEEC---------------------------------------
T ss_pred CCccceEEE--EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh----------------------------------
Confidence 455555433 47999999999999974 79999999976432110
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (968)
.+-.+.+|.+.+.++.+ ..-+.+-.++. ....+|||||++|++|.+... ....++...+
T Consensus 50 --~~~~~~~Ei~il~~l~H-----------------pnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~-~~~~l~e~~~ 109 (307)
T d1a06a_ 50 --KEGSMENEIAVLHKIKH-----------------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDA 109 (307)
T ss_dssp -------CHHHHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCCCHHHH
T ss_pred --HHHHHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeccCCCcHHHhhh-cccCCCHHHH
Confidence 01124566666555422 11122223333 455689999999999977643 2334666666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEec-CCCCceEEEecccccccCHH
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~~ 321 (968)
...+.+++ +..+|..|++|||+||.|||+.. ++++.++|+|||+++..+..
T Consensus 110 ~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~ 163 (307)
T d1a06a_ 110 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 163 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred HHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence 55555554 78899999999999999999964 23488999999999876543
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.62 E-value=2e-16 Score=171.81 Aligned_cols=143 Identities=20% Similarity=0.211 Sum_probs=90.5
Q ss_pred ccccccceeEEEEEEeC-CCC---EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~---~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|+||+||+|+++ +|+ .||||+.++...+... -+|.
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~ 75 (299)
T d1jpaa_ 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 75 (299)
T ss_dssp EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHH------------------------------------HHHH
Confidence 58999999999999975 443 5888877654322110 0244
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|++.+.++++ ..-|.+=.++. ....+|||||++|++|.++.......++...+...+.++.
T Consensus 76 ~E~~~l~~l~H-----------------pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia 138 (299)
T d1jpaa_ 76 SEASIMGQFDH-----------------PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIA 138 (299)
T ss_dssp HHHHHHTTCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHH
Confidence 56666555422 11122222222 4567899999999999876443333456665555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 139 ~gl~yLH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~~~ 181 (299)
T d1jpaa_ 139 AGMKYLADMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLEDD 181 (299)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC---------
T ss_pred HHHHHHhhCCCccCccccceEEECCC--CcEEECCcccceEccCC
Confidence 888999999999999999999865 89999999999877654
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.3e-16 Score=175.14 Aligned_cols=141 Identities=20% Similarity=0.193 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+........ .. +.+|+
T Consensus 12 ~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------------------------------~~------~~~Ei 55 (322)
T d1s9ja_ 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR------------------------------NQ------IIREL 55 (322)
T ss_dssp EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHH------------------------------HH------HHHHG
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHH------------------------------HH------HHHHH
Confidence 5799999999999997 48999999998754322110 11 12233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-|.+-.++. .+..+|||||++|.+|.++.. +...++...+...+.+++ +
T Consensus 56 ~il~~l~H-----------------pnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qil~aL 117 (322)
T d1s9ja_ 56 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGL 117 (322)
T ss_dssp GGGGGCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 33322211 11122223333 455689999999999987753 233466555555554544 7
Q ss_pred HHHHh-cCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|. +|++|||+||+|||++.+ |+++|+|||+++.+.+
T Consensus 118 ~yLH~~~~IiHRDiKP~NILl~~~--~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 118 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 157 (322)
T ss_dssp HHHHHHHCCCCSCCSGGGEEECTT--CCEEECCCCCCHHHHH
T ss_pred HHHHHhCCEEccccCHHHeeECCC--CCEEEeeCCCccccCC
Confidence 78886 699999999999999865 8999999999976543
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=3.1e-16 Score=166.55 Aligned_cols=140 Identities=21% Similarity=0.197 Sum_probs=100.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+||||.||+|+.+++++||||+.+.+-.. +-+|.+|.+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------------------------------------~~~~~~Ev~ 51 (258)
T d1k2pa_ 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (258)
T ss_dssp CCCCEETTEEEEEEEETTTEEEEEEEEESSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCEEEEEEECcCcCC--------------------------------------HHHHHHHHH
Confidence 579999999999999999999999998753211 012455666
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (968)
.+.++++ ..-+.+=.++. ...-++||||++|+++.+.............+...+.++. +.
T Consensus 52 ~~~~l~H-----------------pnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~ 114 (258)
T d1k2pa_ 52 VMMNLSH-----------------EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114 (258)
T ss_dssp HHHTCCC-----------------TTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-----------------CceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHH
Confidence 6655432 11122222222 3556899999999888776544445566666555555544 88
Q ss_pred HHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+|..|++|+|+||.||+++.+ +.++|+|||+++.+..
T Consensus 115 ~LH~~~iiH~dlk~~Nill~~~--~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 115 YLESKQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLD 152 (258)
T ss_dssp HHHHTTBCCSCCSGGGEEECTT--CCEEECCCSSCCBCSS
T ss_pred HHhhcCcccccccceeEEEcCC--CcEEECcchhheeccC
Confidence 8999999999999999999865 8999999999987654
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.60 E-value=4.2e-16 Score=170.53 Aligned_cols=143 Identities=20% Similarity=0.248 Sum_probs=94.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|+||+|+. .+|+.||||+.+...... .. ..+ .+.+|+
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~----~~--------------------~~~----------~~~~E~ 55 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LK--------------------QVE----------HTNDER 55 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TT--------------------CHH----------HHHHHH
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC----HH--------------------HHH----------HHHHHH
Confidence 5799999999999997 579999999976422100 00 000 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++++ ..-+.+-.++. ....++||||++|.++..... .........+...+.+++ +
T Consensus 56 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~-~~~~~~~~~~~~~~~qi~~al 117 (316)
T d1fota_ 56 LMLSIVTH-----------------PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLAL 117 (316)
T ss_dssp HHHHSCCB-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------cChhheeeeEeeCCeeeeEeeecCCcccccccc-ccccccccHHHHHHHHHHHhh
Confidence 55444321 11122223333 455689999999988776543 223344444333333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 118 ~~lH~~~iiHrDiKp~NILl~~~--g~vkL~DFG~a~~~~~ 156 (316)
T d1fota_ 118 EYLHSKDIIYRDLKPENILLDKN--GHIKITDFGFAKYVPD 156 (316)
T ss_dssp HHHHTTTEECCCCCGGGEEECTT--SCEEECCCSSCEECSS
T ss_pred hhhccCcEEccccCchheeEcCC--CCEEEecCccceEecc
Confidence 88999999999999999999865 8999999999988754
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=4.6e-16 Score=166.34 Aligned_cols=154 Identities=16% Similarity=0.096 Sum_probs=99.3
Q ss_pred CCCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHH
Q 002092 111 GESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (968)
Q Consensus 111 g~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (968)
|.+.+..|..|++ -||+|+||.||+|+.+ +|+.||||+....-.. ..+.
T Consensus 3 g~~~~gry~~~~~-~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~--~~~~--------------------------- 52 (270)
T d1t4ha_ 3 GMSNDGRFLKFDI-EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSER--------------------------- 52 (270)
T ss_dssp EECTTSCEEEEEE-EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHH---------------------------
T ss_pred CcCCCCCEEEeee-EEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHH---------------------------
Confidence 3334444555654 5999999999999974 7999999987532110 0000
Q ss_pred HhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeec-----CCCeEEecccCCCCCCCHHHHHhcC
Q 002092 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEAFG 264 (968)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~~~ 264 (968)
+ +|.+|++.+.++++ ..-+.+=.++.+ ..-+|||||++|.+|.+... ....
T Consensus 53 ~------~~~~E~~il~~l~H-----------------pnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~-~~~~ 108 (270)
T d1t4ha_ 53 Q------RFKEEAEMLKGLQH-----------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKV 108 (270)
T ss_dssp H------HHHHHHHHHTTCCC-----------------TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHH-HHSS
T ss_pred H------HHHHHHHHHHhCCC-----------------CCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHh-cccc
Confidence 0 24456665554422 111222222221 12379999999999987643 2334
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
++...+...+.+++ +..+|..| ++|||+||+|||++.+ ++.++|+|||+++...
T Consensus 109 ~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~-~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 109 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 166 (270)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCC-CCCEEEeecCcceecc
Confidence 56555544444444 77889988 9999999999999742 4889999999987544
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=3.5e-16 Score=167.19 Aligned_cols=144 Identities=19% Similarity=0.217 Sum_probs=89.8
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+. .+|+.||||+.+....... +. + .+.+|+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--~~---------------------------~------~~~~E~ 54 (269)
T d2java1 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EK---------------------------Q------MLVSEV 54 (269)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHH--HH---------------------------H------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHH--HH---------------------------H------HHHHHH
Confidence 5799999999999997 4899999998765421110 00 0 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHH---HhcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~ 276 (968)
+.+.++.+ ..-+.+=.++. ...-+|||||++|++|.++... ....++...+...+.+
T Consensus 55 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~q 117 (269)
T d2java1 55 NLLRELKH-----------------PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 117 (269)
T ss_dssp HHTTSCCC-----------------TTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHH
Confidence 54443321 11122222222 2334799999999999887532 1234566666555555
Q ss_pred HH--HHHHHhcC-----ccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 277 AY--AHQIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 277 ~~--l~~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+. +..+|..| ++|||+||.|||++.+ +.++|+|||+++.++..
T Consensus 118 i~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~--~~vkl~DFG~a~~~~~~ 167 (269)
T d2java1 118 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNHD 167 (269)
T ss_dssp HHHHHHHHHHHCC---------CCGGGEEECTT--SCEEECCHHHHHHC---
T ss_pred HHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC--CcEEEeeccceeecccC
Confidence 44 77888866 9999999999999865 89999999999887653
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.58 E-value=1.1e-15 Score=170.42 Aligned_cols=145 Identities=15% Similarity=0.092 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+.+ +|+.||||+..+..... + ..+..+.+|.
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~---~-------------------------------~~~~~~~~e~ 55 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM---K-------------------------------QGETLALNER 55 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH---H-------------------------------TCHHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcch---h-------------------------------hHHHHHHHHH
Confidence 57999999999999974 79999999875321000 0 0001122233
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..+..++. + +++. +.+-.++. ....+|||||++|++|.+... .........+...+.+++
T Consensus 56 ~~~~~l~~-~--------------~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~a 119 (364)
T d1omwa3 56 IMLSLVST-G--------------DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 119 (364)
T ss_dssp HHHHHHSS-S--------------CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-C--------------CCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHH-hcccccHHHHHHHHHHHHHH
Confidence 22332221 1 1122 22222332 455689999999999987643 233445555544444444
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.++.
T Consensus 120 L~ylH~~~iiHrDlKP~NILl~~~--g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 120 LEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSK 159 (364)
T ss_dssp HHHHHHTTEECCCCSGGGEEECSS--SCEEECCCTTCEECSS
T ss_pred HHHHHHCCccceeeccceeEEcCC--CcEEEeeeceeeecCC
Confidence 788999999999999999999865 8999999999987754
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.2e-15 Score=168.13 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=95.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||.||+|+. .+|+.||||+.+...... .+ ..-.+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~--~~--------------------------------~~~~~~~E~ 56 (337)
T d1o6la_ 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD--------------------------------EVAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC--HH--------------------------------HHHHHHHHH
Confidence 5799999999999997 589999999976321000 00 000133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+=.++. ....++||||++|++|.+... ....++...+...+.+++ +
T Consensus 57 ~il~~l~h-----------------p~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~-~~~~~~e~~~~~~~~qil~al 118 (337)
T d1o6la_ 57 RVLQNTRH-----------------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSAL 118 (337)
T ss_dssp HHHHSCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEEEEEeeeccccccccceeccCCCchhhhhh-cccCCcHHHHHHHHHHHhhhh
Confidence 55443321 11122222232 345689999999999876643 233455554444444443 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.+ |.++|+|||+++.+..
T Consensus 119 ~ylH~~~iiHRDlKP~NILl~~~--g~vkl~DFG~a~~~~~ 157 (337)
T d1o6la_ 119 EYLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEGIS 157 (337)
T ss_dssp HHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCSCC
T ss_pred hhhhhcCccccccCHHHeEecCC--CCEEEeeccccccccc
Confidence 88999999999999999999866 8999999999987643
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=7.3e-16 Score=166.02 Aligned_cols=143 Identities=18% Similarity=0.205 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEEeCC-C----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLVD-G----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~-G----~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|+||.||+|++++ + ..||||+.++...+. .+.+|
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~------------------------------------~~~~~ 56 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK------------------------------------QRVDF 56 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHH------------------------------------HHHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChH------------------------------------HHHHH
Confidence 579999999999999753 2 479999887543221 01135
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
.+|++.+.++++ ..-|.+=.++. ....++||||++|..+.+........++...+...+.++
T Consensus 57 ~~E~~il~~l~H-----------------~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i 119 (283)
T d1mqba_ 57 LGEAGIMGQFSH-----------------HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 119 (283)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-----------------CCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHH
Confidence 567766665532 11122222222 456689999999988876544333446666666555555
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
. +..+|..|++|||+||+||||+.+ +.++|+|||+++.+...
T Consensus 120 ~~gl~~lH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~~~ 163 (283)
T d1mqba_ 120 AAGMKYLANMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDD 163 (283)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-------
T ss_pred HHhhhhccccccccCccccceEEECCC--CeEEEcccchhhcccCC
Confidence 4 888999999999999999999865 89999999999877554
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.57 E-value=1.6e-15 Score=162.64 Aligned_cols=144 Identities=22% Similarity=0.339 Sum_probs=98.6
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. .+|+.||||+.++..... -. . ...|.+|+
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~----~~------------------------~------~~~~~~E~ 58 (277)
T d1o6ya_ 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD----PS------------------------F------YLRFRREA 58 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTC----HH------------------------H------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccC----HH------------------------H------HHHHHHHH
Confidence 5899999999999997 589999999987653311 00 0 01244566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cC----CCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS----ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~----~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
+.+.++.+ ..-+.+-.++. .. ..+|||||++|.+|.+... ....++...+...+.++
T Consensus 59 ~~l~~~~h-----------------pniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~-~~~~l~~~~~~~i~~qi 120 (277)
T d1o6ya_ 59 QNAAALNH-----------------PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADA 120 (277)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCcccceeeeccCCCceEEEEEECCCCCEehhhhc-ccCCCCHHHHHHHHHHH
Confidence 66554322 11122222222 11 2479999999998876543 33356666666655555
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+ +..+|..|++|||+||+|||++.+ +.++++|||.+..+...
T Consensus 121 ~~al~~lH~~~iiHrDiKP~NIll~~~--~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 121 CQALNFSHQNGIIHRDVKPANIMISAT--NAVKVMDFGIARAIADS 164 (277)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETT--SCEEECCCTTCEECC--
T ss_pred HHHHHHHHhCCccCccccCcccccCcc--ccceeehhhhhhhhccc
Confidence 4 888999999999999999999965 88999999998876543
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.1e-15 Score=165.38 Aligned_cols=157 Identities=18% Similarity=0.188 Sum_probs=103.4
Q ss_pred CccccccccccccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHh
Q 002092 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (968)
Q Consensus 113 ~~~~~f~~~d~~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (968)
++++.|+-. +.||+|+||.||+|+. .+|+.||||+.+........ .....
T Consensus 7 ~i~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~---------------------~~~~~------ 57 (293)
T d1jksa_ 7 NVDDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------------------RGVSR------ 57 (293)
T ss_dssp CGGGTEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS---------------------SSBCH------
T ss_pred CcccCEEEe--EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhh---------------------hhHHH------
Confidence 344444332 5699999999999997 58999999987643211000 00000
Q ss_pred hhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHH
Q 002092 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (968)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (968)
-++.+|++.+.++.+ ..-|.+=.++. ....+|||||++|++|.++.. ....++...+
T Consensus 58 ----~~~~~E~~il~~l~H-----------------pnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~-~~~~l~~~~~ 115 (293)
T d1jksa_ 58 ----EDIEREVSILKEIQH-----------------PNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA 115 (293)
T ss_dssp ----HHHHHHHHHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHH
T ss_pred ----HHHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCccccchhc-cccccchhHH
Confidence 124556666666532 11122223333 455689999999999987753 2345666665
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCceEEecCCC--CceEEEecccccccCH
Q 002092 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLSS 320 (968)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~~ 320 (968)
...+.+++ +..+|..|++|||+||.|||++.++. ..++|+|||++..++.
T Consensus 116 ~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~ 169 (293)
T d1jksa_ 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred HHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence 55555544 88899999999999999999986521 2599999999987754
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.56 E-value=1.7e-15 Score=168.06 Aligned_cols=143 Identities=16% Similarity=0.173 Sum_probs=97.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+..... +.. .++ .+.+|.
T Consensus 47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~----~~~--------------------~~~----------~~~~E~ 92 (350)
T d1rdqe_ 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV----KLK--------------------QIE----------HTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH----HTT--------------------CHH----------HHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEchHHcc----CHH--------------------HHH----------HHHHHH
Confidence 5799999999999997 48999999987532110 000 000 133455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-.++. ....++||||+.|.++.+... ....++...+...+.+++ +
T Consensus 93 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~-~~~~l~e~~~~~i~~qi~~aL 154 (350)
T d1rdqe_ 93 RILQAVNF-----------------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTF 154 (350)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CcEeecccccccccccccccccccccchhhhHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 44443321 11122223333 455689999999998876643 334566666655555554 8
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+|..|++|||+||.|||++.+ |.++|+|||+++.+..
T Consensus 155 ~yLH~~~iiHRDIKP~NILl~~~--g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 155 EYLHSLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRVKG 193 (350)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHhCCEecCcCCHHHcccCCC--CCEEeeeceeeeeccc
Confidence 88999999999999999999865 8999999999988754
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.56 E-value=1.7e-15 Score=163.99 Aligned_cols=138 Identities=19% Similarity=0.308 Sum_probs=95.1
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+. .+|+.||||+...... .-.+++|+
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~e~ 51 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---------------------------------------APQLRDEY 51 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---------------------------------------SCCHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccC---------------------------------------cHHHHHHH
Confidence 5799999999999997 4799999998753211 01234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+..+.+. -.+|.++. ....++||||+ |.+|.+.............+...+.+++
T Consensus 52 ~~~~~l~~~-------------------~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~ 111 (293)
T d1csna_ 52 RTYKLLAGC-------------------TGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQML 111 (293)
T ss_dssp HHHHHTTTC-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCC-------------------CCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHH
Confidence 555544321 12333332 56678999999 5676665443334456665555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecC---CCCceEEEecccccccCH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ .++.++|+|||+++.+.+
T Consensus 112 ~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 112 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 889999999999999999999742 247899999999987643
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.56 E-value=4.8e-15 Score=162.92 Aligned_cols=136 Identities=15% Similarity=0.221 Sum_probs=94.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||.|+||+||+|+. .+|+.||||+.++.-.+. +.+|.
T Consensus 41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~----------------------------------------~~~Ei 80 (328)
T d3bqca1 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK----------------------------------------IKREI 80 (328)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHH----------------------------------------HHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHH----------------------------------------HHHHH
Confidence 6799999999999997 589999999987543222 22355
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
..+.++.+. ..-+.+-.++. ....++||||++|.+|.+.. ..++...+...+.+++
T Consensus 81 ~il~~l~~h----------------pnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~ 140 (328)
T d3bqca1 81 KILENLRGG----------------PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILK 140 (328)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHH
T ss_pred HHHHhccCC----------------CCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHH
Confidence 555554310 01122222332 23468999999998887652 2355555555555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|.+|++|||+||+||||+.+ ++.++|+|||++..+.+
T Consensus 141 aL~~LH~~gIvHrDiKp~NILi~~~-~~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 141 ALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHP 182 (328)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCGGGCEECCT
T ss_pred HHHHHhhcccccccccccceEEcCC-CCeeeecccccceeccC
Confidence 788999999999999999999865 35689999999987754
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=9.4e-16 Score=166.44 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=91.0
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||+|+||+||+|+. .+|+.||||+.+........ +++ +-.+.+|+
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~--------------------------~~~------~~~~~~Ei 51 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DGI------NRTALREI 51 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------------CTHHHHHH
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhh--------------------------HHH------HHHHHHHH
Confidence 3699999999999997 47999999987543211100 000 11244566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+.++.+ ..-+.+-.++. .+..+|||||++|..+..+.. ....++...+...+.+++ +
T Consensus 52 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL 113 (299)
T d1ua2a_ 52 KLLQELSH-----------------PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGL 113 (299)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeEEEeeeccCCceeehhhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHH
Confidence 65555432 11223333333 566789999999866543321 112233333333333333 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+|..|++|||+||+|||++.+ +.++|+|||+++.+..
T Consensus 114 ~~lH~~~iiHrDiKp~NIli~~~--~~~KL~DFG~a~~~~~ 152 (299)
T d1ua2a_ 114 EYLHQHWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFGS 152 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--CCEEECCCGGGSTTTS
T ss_pred HHhhccceecccCCcceEEecCC--CccccccCccccccCC
Confidence 88999999999999999999865 8999999999977653
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.2e-15 Score=163.46 Aligned_cols=141 Identities=18% Similarity=0.172 Sum_probs=85.4
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+.+ +++.||||+.+.+.... +. -.
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~---~~---------------------------------~~ 62 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS---EH---------------------------------RA 62 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHH---HH---------------------------------HH
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcH---HH---------------------------------HH
Confidence 68999999999999863 46789999876432211 00 01
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee--cCCCeEEecccCCCCCCCHHHHHh------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA------------ 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~------------ 262 (968)
+.+|...+.++.+ ++. +.+-.... ....++||||++|++|.++.....
T Consensus 63 ~~~e~~~l~~~~~-----------------h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~ 125 (299)
T d1ywna1 63 LMSELKILIHIGH-----------------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 125 (299)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-------
T ss_pred HHHHHHHHHhhcC-----------------CCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhh
Confidence 2234444444321 111 11112222 234689999999999988754321
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccC
Q 002092 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (968)
Q Consensus 263 ---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (968)
..++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 126 ~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~--~~~Kl~DFGla~~~~ 185 (299)
T d1ywna1 126 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 185 (299)
T ss_dssp ----CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG--GCEEECC------CC
T ss_pred hhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC--CcEEEccCcchhhcc
Confidence 1244445555555544 788999999999999999999866 899999999987654
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3.6e-15 Score=163.74 Aligned_cols=142 Identities=18% Similarity=0.129 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEeC-CC-----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G-----~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+.+ .+ ..||||+........ ....
T Consensus 43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 86 (325)
T d1rjba_ 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS------------------------------------EREA 86 (325)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHH------------------------------------HHHH
Confidence 57999999999999974 22 369999876532211 0112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (968)
+.+|.+.+.++.+ ++. |.+=.++. ....+|||||++|++|.+......
T Consensus 87 ~~~E~~~l~~l~~-----------------HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~ 149 (325)
T d1rjba_ 87 LMSELKMMTQLGS-----------------HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 149 (325)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC----------
T ss_pred HHHHHHHHHHhcC-----------------CCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccc
Confidence 4456666665521 111 22222222 456789999999999987643211
Q ss_pred ---------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 263 ---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 ---------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.++. +..+|..|++|||+||+||+++.+ +.++|+|||+++....
T Consensus 150 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~--~~~Kl~DFGla~~~~~ 216 (325)
T d1rjba_ 150 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG--KVVKICDFGLARDIMS 216 (325)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT--TEEEECCCGGGSCGGG
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC--CeEEEeeccccccccC
Confidence 1234444444444444 788999999999999999999965 8999999999976643
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=4.3e-15 Score=158.96 Aligned_cols=143 Identities=18% Similarity=0.190 Sum_probs=90.8
Q ss_pred ccccccceeEEEEEEeCC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~----G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|+||+||+|+... +..||||+.+....+... -.|.
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~~ 56 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR------------------------------------EKFL 56 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHH------------------------------------HHHH
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHH------------------------------------HHHH
Confidence 589999999999999742 356888877543221100 1244
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
+|++.+.++++ ..-+.+=..+..+..+|||||++|.++.+........++...+...+.++.
T Consensus 57 ~E~~~l~~l~H-----------------pnIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~ 119 (273)
T d1mp8a_ 57 QEALTMRQFDH-----------------PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119 (273)
T ss_dssp HHHHHHHTCCC-----------------TTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHH
Confidence 56666655432 111222222225667899999999988776443344566666655555544
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.||+++.+ +.++|+|||+++.++..
T Consensus 120 gl~ylH~~~iiHrDlKp~NIll~~~--~~~Kl~DfG~a~~~~~~ 161 (273)
T d1mp8a_ 120 ALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDS 161 (273)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEEET--TEEEECC----------
T ss_pred HhhhhcccCeeccccchhheeecCC--CcEEEccchhheeccCC
Confidence 788999999999999999999976 89999999999877543
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.5e-15 Score=164.71 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=92.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+-||+|++|.||+|+. .+|+.||||+.+...... + ..-.+.+|.
T Consensus 8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-----------------------------~------~~~~~~~Ei 52 (298)
T d1gz8a_ 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------G------VPSTAIREI 52 (298)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEC------------------------------------------CCHHHHHHH
T ss_pred cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcCh-----------------------------H------HHHHHHHHH
Confidence 5699999999999997 589999999876432100 0 001234455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
+.+.++.+ ..-+.+-..+. .+..+|||||++|..+.........+++...+...+.+++ +
T Consensus 53 ~il~~l~H-----------------p~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L 115 (298)
T d1gz8a_ 53 SLLKELNH-----------------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115 (298)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHH
Confidence 55444321 11122222222 4566899999987544332222234466666666555555 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEeccccccc
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (968)
..+|..|++|||+||+|||++.+ +.++|+|||+++..
T Consensus 116 ~yLH~~~IiHrDiKpeNIl~~~~--~~~kl~DFG~a~~~ 152 (298)
T d1gz8a_ 116 AFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAF 152 (298)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTT--SCEEECSTTHHHHH
T ss_pred HHhhcCCEEccccCchheeeccc--CcceeccCCcceec
Confidence 88999999999999999999865 89999999988643
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=6.6e-15 Score=159.56 Aligned_cols=137 Identities=20% Similarity=0.304 Sum_probs=93.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+.... .-.+..|+
T Consensus 13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~E~ 53 (299)
T d1ckia_ 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---------------------------------------HPQLHIES 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEESCTT---------------------------------------SCCHHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc---------------------------------------CHHHHHHH
Confidence 5799999999999997 5799999998764311 01234555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+.+.++.+. + .|+.++. ....++||||++|. +.+........++...+...+.+++
T Consensus 54 ~i~~~l~~~-----------------~--~i~~~~~~~~~~~~~~ivme~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~ 113 (299)
T d1ckia_ 54 KIYKMMQGG-----------------V--GIPTIRWCGAEGDYNVMVMELLGPS-LEDLFNFCSRKFSLKTVLLLADQMI 113 (299)
T ss_dssp HHHHHSTTS-----------------T--TCCCEEEEEEETTEEEEEEECCCCB-HHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHccCC-----------------C--cccEEEEEEecCCEEEEEEEEcCCc-hhhhhhhccCCCcHHHHHHHHHHHH
Confidence 555554321 1 1222221 45668999999664 3333222334566666666665555
Q ss_pred --HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccC
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (968)
++.+|..|++|||+||+|||++.. .+..++|+|||+++.+.
T Consensus 114 ~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~ 157 (299)
T d1ckia_ 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157 (299)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred HHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence 889999999999999999998632 23579999999998764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5.1e-15 Score=163.13 Aligned_cols=138 Identities=18% Similarity=0.134 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+..- . +.+|.
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~----------------------------------------~~~E~ 55 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K----------------------------------------ARREV 55 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECSH--H----------------------------------------HHHHH
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECCcH--H----------------------------------------HHHHH
Confidence 5799999999999997 589999999875310 0 12344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCC-ceEeeeeee-----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~ 275 (968)
..+.++.+ ++ -+.+-.++. ....+||||||+|++|.++..... ..++...+...+.
T Consensus 56 ~~~~~~~~-----------------hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~ 118 (335)
T d2ozaa1 56 ELHWRASQ-----------------CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 118 (335)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHH
T ss_pred HHHHHhcC-----------------CCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHH
Confidence 33333211 11 123333332 133589999999999987643111 2345555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecC-CCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|||+||+|||++.+ +.+.++|+|||+++.+..
T Consensus 119 qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~ 166 (335)
T d2ozaa1 119 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166 (335)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred HHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC
Confidence 544 788999999999999999999853 236799999999987644
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=6.2e-15 Score=157.73 Aligned_cols=149 Identities=18% Similarity=0.148 Sum_probs=98.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+....... ........+.+|.
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-------------------------------~~~~~~~~~~~E~ 58 (273)
T d1xwsa_ 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------------------------------GELPNGTRVPMEV 58 (273)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCE-------------------------------EECTTCCEEEHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccch-------------------------------hhhhHHHHHHHHH
Confidence 5799999999999997 5899999998764321100 0001122355677
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCC-CCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGI-RLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~-~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..+.++.... ..-+.+=.++. ....++||||++|. .+.+... ....++...+...+.+++
T Consensus 59 ~il~~l~~~h---------------~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~-~~~~l~e~~~~~~~~qi~~a 122 (273)
T d1xwsa_ 59 VLLKKVSSGF---------------SGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 122 (273)
T ss_dssp HHHHHHCSSS---------------CSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhccCC---------------CCccEEEEEEeeCCeEEEEEEeccCcchHHHHHh-ccCCCCHHHHHHHHHHHHHH
Confidence 7777664211 01122223333 45568999999874 4433322 334566666555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||+|||++.+ ++.++|+|||+++....
T Consensus 123 l~~lH~~~iiHrDiKp~NIll~~~-~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 123 VRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKD 163 (273)
T ss_dssp HHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCS
T ss_pred HHHHHHCCCccccCcccceEEecC-CCeEEECccccceeccc
Confidence 788999999999999999999854 37899999999986653
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=2.1e-14 Score=157.10 Aligned_cols=143 Identities=15% Similarity=0.146 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+.+ +|+.||||+.+++.... ..+.+ .+..|.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-~~~~~---------------------------------~~~~e~ 53 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVE---------------------------------CTMVEK 53 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHH---------------------------------HHHHHH
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-hHHHH---------------------------------HHHHHH
Confidence 68999999999999984 89999999986421100 00000 112232
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (968)
..+.+ .+. ++. +.+=.++. ....+|||||++|++|.+... .....+...+...+.+++
T Consensus 54 ~~l~~---~~~--------------hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~-~~~~~~e~~~~~~~~qi~~a 115 (320)
T d1xjda_ 54 RVLSL---AWE--------------HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILG 115 (320)
T ss_dssp HHHHH---HTT--------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHH---hCC--------------CCcEEEEEEEEccCCceeEEEeecCCCcHHHHhh-ccCCCCHHHHHHHHHHHHHH
Confidence 22221 111 111 22222332 455689999999999988754 334566655555555544
Q ss_pred HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+..+|..|++|||+||.|||++.+ ++++|+|||+++.+..
T Consensus 116 l~ylH~~~iiHrDikp~NiL~~~~--~~~kl~DFG~a~~~~~ 155 (320)
T d1xjda_ 116 LQFLHSKGIVYRDLKLDNILLDKD--GHIKIADFGMCKENML 155 (320)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCCCC
T ss_pred HHHHHhCCeeeccCcccceeecCC--Cceeccccchhhhccc
Confidence 888999999999999999999965 8999999999987653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=8.5e-15 Score=156.66 Aligned_cols=142 Identities=16% Similarity=0.121 Sum_probs=93.3
Q ss_pred ccccccceeEEEEEEeC--CC--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV--DG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--~G--~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+-||+|+||+||+|+++ ++ .+||||+..+.....- ... -+|.
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~------------------------~~~----------~~~~ 59 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP------------------------EAM----------DDFI 59 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C------------------------HHH----------HHHH
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCH------------------------HHH----------HHHH
Confidence 46999999999999863 33 3789998764322110 000 1255
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
+|++.+.++++ + .|-++|. ....++||||+++.++.+........++...+...+.+
T Consensus 60 ~Ei~~l~~l~H------------------~--nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~q 119 (273)
T d1u46a_ 60 REVNAMHSLDH------------------R--NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119 (273)
T ss_dssp HHHHHHHHCCC------------------T--TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------C--CEEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHH
Confidence 67766666532 1 1223332 45568999999999888765544455777777666666
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+. +..+|..|++|||+||.||+++.+ ++++|+|||+++.+...
T Consensus 120 i~~gl~ylH~~~iiHrDikp~NIll~~~--~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 120 VAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQN 164 (273)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCC-
T ss_pred HHHHHHHhhhCCEeeeeecHHHhccccc--cceeeccchhhhhcccC
Confidence 55 888999999999999999999976 89999999999987543
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.51 E-value=3.1e-15 Score=161.20 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=95.7
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|+||.||+|+.++|+.||||+.+...... + .+-.+.+|..
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~---~--------------------------------~~~~~~~E~~ 52 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE---G--------------------------------IPSTTIREIS 52 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG---C--------------------------------CCHHHHHHHH
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhcCh---H--------------------------------HHHHHHHHHH
Confidence 5799999999999999999999999875432110 0 0112344555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH-
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (968)
.+.++++ + .|.+++. .+..+++||++.|..+..+.. ....++...+...+.+++
T Consensus 53 il~~l~h------------------p--nIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~ 111 (286)
T d1ob3a_ 53 ILKELKH------------------S--NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLN 111 (286)
T ss_dssp GGGGCCC------------------T--TBCCEEEEEECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--cEEeeeeecccCCceeEEEEeehhhhHHHHHh-hcCCcchhhhHHHHHHHHH
Confidence 5444321 1 1223332 567789999999866554422 233456555555554444
Q ss_pred -HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++.+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~L~~LH~~~IvHrDiKp~NIll~~~--~~~kl~DfG~a~~~~~ 152 (286)
T d1ob3a_ 112 GIAYCHDRRVLHRDLKPQNLLINRE--GELKIADFGLARAFGI 152 (286)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCTTHHHHHCC
T ss_pred HHHHhccCcEEecCCCCceeeEcCC--CCEEecccccceeccc
Confidence 888999999999999999999866 8999999999877653
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.5e-14 Score=160.19 Aligned_cols=141 Identities=15% Similarity=0.163 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||+||+|+. .+|+.||||+.++.-.... .+ .+.+|.
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~------------------------------~~------~~~~Ei 57 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY------------------------------CQ------RTLREI 57 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHH------------------------------HH------HHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHH------------------------------HH------HHHHHH
Confidence 5799999999999997 5899999999864321110 00 134466
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (968)
..+..+.+. ..+.+-.++. ....+++||++.|.+|.++. ...+++...+...+.++
T Consensus 58 ~il~~l~hp-----------------~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l--~~~~l~~~~i~~i~~qi 118 (345)
T d1pmea_ 58 KILLRFRHE-----------------NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL--KTQHLSNDHICYFLYQI 118 (345)
T ss_dssp HHHHHCCCT-----------------TBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHH--HHCCCCHHHHHHHHHHH
T ss_pred HHHHHcCCC-----------------CCCcEEEEEeeccccccceEEEEEeecCCchhhhh--hcCCCCHHHHHHHHHHH
Confidence 666555321 1122222222 22345666777788888764 44567777666666665
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+ +..+|..|++|||+||+|||++.+ +.++|+|||++..+...
T Consensus 119 l~al~yLH~~~iiHRDIKp~NILl~~~--~~~kl~DfG~a~~~~~~ 162 (345)
T d1pmea_ 119 LRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGLARVADPD 162 (345)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCGG
T ss_pred HHHHHHHHHCCCcCCCCCcceEEECCC--CCEEEcccCceeeccCC
Confidence 5 888999999999999999999865 89999999999876554
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.4e-14 Score=160.64 Aligned_cols=138 Identities=21% Similarity=0.157 Sum_probs=91.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+.+-. .+.+|.
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----------------------------------------~~~~Ei 64 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------------------------------------FKNREL 64 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----------------------------------------SCCHHH
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----------------------------------------HHHHHH
Confidence 5699999999999998 4799999998754211 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-c------CCCeEEecccCCCCCCCHHHHH--hcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~ 273 (968)
+.+.++++ ..-+.+-.++. . ..-+|||||++|..+..+.... ...++...+...
T Consensus 65 ~il~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i 127 (350)
T d1q5ka_ 65 QIMRKLDH-----------------CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127 (350)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHH
Confidence 55554422 11223333332 1 1137999999876444332221 223555554444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+++ +..+|.+||+|||+||+|||++.+ ...++|+|||++..+..
T Consensus 128 ~~qil~aL~yLH~~~IiHrDiKp~NILl~~~-~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCGGGEEECTT-TCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHhcCCcccCCCcceEEEecC-CCceeEecccchhhccC
Confidence 44444 888999999999999999999865 24789999999987754
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.2e-14 Score=156.34 Aligned_cols=152 Identities=14% Similarity=0.166 Sum_probs=97.0
Q ss_pred ccccccccccccccccceeEEEEEEeCC--C--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHH
Q 002092 114 MGGMFMDFVETPLATASIAQVHRATLVD--G--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (968)
Q Consensus 114 ~~~~f~~~d~~plgsaSigqV~~A~l~~--G--~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (968)
.+.+...|+ +.||+|+||.||+|++.+ + ..||||+.+...... +
T Consensus 24 ~~~~~~~~~-~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~---~---------------------------- 71 (311)
T d1r0pa_ 24 PSSLIVHFN-EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG---E---------------------------- 71 (311)
T ss_dssp GGGEEEEEE-EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHH---H----------------------------
T ss_pred hHHceeccc-eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHH---H----------------------------
Confidence 344433555 569999999999999853 2 258999875321110 0
Q ss_pred HhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEecccCCCCCCCHHHHHhcCCCH
Q 002092 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (968)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (968)
.-+|.+|++.+.++++- .-+.+=.... ....++||||++|.++.++..........
T Consensus 72 -----~~~~~~E~~~l~~l~Hp-----------------nIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~ 129 (311)
T d1r0pa_ 72 -----VSQFLTEGIIMKDFSHP-----------------NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 129 (311)
T ss_dssp -----HHHHHHHHHHHHTCCCT-----------------TBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBH
T ss_pred -----HHHHHHHHHHHHhCCCC-----------------CEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchH
Confidence 01255676666655321 0111111111 23468999999999888764433333444
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..+...+.++. +..+|..|++|||+||.|||++.+ +.++|.|||+++.+...
T Consensus 130 ~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~--~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 130 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK--FTVKVADFGLARDMYDK 183 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSSGGGCCTTTT
T ss_pred HHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCC--CCEEEecccchhhcccc
Confidence 44443333333 677999999999999999999865 89999999999877543
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.7e-14 Score=157.68 Aligned_cols=143 Identities=17% Similarity=0.147 Sum_probs=96.1
Q ss_pred ccccccceeEEEEEEeC-CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCc
Q 002092 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~----~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (968)
+.||+|+||+||+|+.+ +|+ +||||..++...... +-.|
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 58 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA------------------------------------NKEI 58 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CT------------------------------------HHHH
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHH------------------------------------HHHH
Confidence 58999999999999974 665 578887654322110 0124
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
.+|++.+.++++- .-|.+=.++.....+++|||+.|.+|.+........++...+...+.++.
T Consensus 59 ~~E~~~l~~l~Hp-----------------nIv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~ 121 (317)
T d1xkka_ 59 LDEAYVMASVDNP-----------------HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121 (317)
T ss_dssp HHHHHHHHHCCCT-----------------TBCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-----------------CEeeEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHH
Confidence 5677776665321 11222222335667899999999888766443344566665555555544
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|.+|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 122 ~gl~yLH~~~iiHrDlKp~NIll~~~--~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 122 KGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAE 164 (317)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCCSHHHHTTTT
T ss_pred HHHHHHHHcCcccCcchhhcceeCCC--CCeEeeccccceecccc
Confidence 888999999999999999999976 89999999999877543
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2.2e-14 Score=158.79 Aligned_cols=140 Identities=20% Similarity=0.315 Sum_probs=88.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+....... ..+ .+.+|.
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-----------------------------~~~------~~~~Ei 68 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-----------------------------FAK------RAYREL 68 (346)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHH-----------------------------HHH------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChH-----------------------------HHH------HHHHHH
Confidence 5799999999999997 5799999999864322110 001 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
+.+.++.+. ..|.+-.++. ....+|||||+ |..+.++ .....++...+...+.
T Consensus 69 ~il~~l~hp-----------------niv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~--~~~~~l~~~~~~~~~~ 128 (346)
T d1cm8a_ 69 RLLKHMRHE-----------------NVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKL--MKHEKLGEDRIQFLVY 128 (346)
T ss_dssp HHHHHCCBT-----------------TBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHH--HHHCCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CeeEEEEEeccCccccccceEEEEEecc-cccHHHH--HHhccccHHHHHHHHH
Confidence 555544321 1122222222 12358999999 5555444 2345677666655555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+++ +..+|..|++|||+||+|||++.+ +.++++|||++...+.
T Consensus 129 qi~~aL~~LH~~~IiHrDiKp~NIL~~~~--~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 129 QMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQADS 173 (346)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHhCCCcccccCcchhhcccc--cccccccccceeccCC
Confidence 544 788999999999999999999865 8999999999988764
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=1.8e-14 Score=156.43 Aligned_cols=143 Identities=18% Similarity=0.163 Sum_probs=95.3
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+.+ +++.||||+.+....... +-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~------------------------------------~~~ 62 (301)
T d1lufa_ 19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM------------------------------------QAD 62 (301)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHH------------------------------------HHH
T ss_pred EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHH------------------------------------HHH
Confidence 47999999999999864 468999998765432211 112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh--------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (968)
|.+|++.+.++++. ..+.+=..+. ....+++|||+++.+|.+......
T Consensus 63 ~~~E~~il~~l~h~-----------------niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 125 (301)
T d1lufa_ 63 FQREAALMAEFDNP-----------------NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 125 (301)
T ss_dssp HHHHHHHHHTCCCT-----------------TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-------------
T ss_pred HHHHHHHHHhcCCC-----------------CcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccch
Confidence 44566666554321 1111112222 466789999999999887643211
Q ss_pred ---------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 263 ---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 263 ---------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
..++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.+.
T Consensus 126 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~--~~~Kl~DFGls~~~~~~ 193 (301)
T d1lufa_ 126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYSA 193 (301)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTGG
T ss_pred hhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCC--CcEEEccchhheeccCC
Confidence 1133333333333333 778999999999999999999965 89999999998766543
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.1e-14 Score=158.93 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=94.9
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+........ .-.+.+|+
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~-----------------------------------~~~~~~Ei 68 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYREL 68 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHH-----------------------------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHH-----------------------------------HHHHHHHH
Confidence 6799999999999996 58999999997643221110 00133466
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (968)
+.+.++.+ ...+.+-.++. ....+++||++.|.+|.++. ...+++...+...+.+
T Consensus 69 ~il~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~--~~~~l~e~~~~~i~~q 129 (348)
T d2gfsa1 69 RLLKHMKH-----------------ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQ 129 (348)
T ss_dssp HHHHHCCC-----------------TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHH--TTCCCCHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCeeeEEEEEeeccccccCceEEEEEeecCCchhhhc--ccccccHHHHHHHHHH
Confidence 66555432 11122333332 23457788888898887763 3445676666555555
Q ss_pred HH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
++ +..+|..|++|||+||+|||++.+ |.++++|||++......
T Consensus 130 il~aL~~LH~~giiHrDiKp~NILi~~~--~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 130 ILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTDDE 174 (348)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCC----CCTGG
T ss_pred HHHHHHHHHhCCCcccccCCcccccccc--ccccccccchhcccCcc
Confidence 54 788999999999999999999866 89999999998876544
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=1.6e-14 Score=157.27 Aligned_cols=142 Identities=18% Similarity=0.209 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+|+||.||+|+++ +++.||||+.+...... .+..
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~------------------------------------~~~~ 69 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR------------------------------------ERIE 69 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChH------------------------------------HHHH
Confidence 67999999999999863 36899999876432111 0112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhc---------CCCH
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---------GVNK 267 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~ 267 (968)
|.+|+..+.++.+ ..-+.+-.++. ....++||||++|++|.++...... ..+.
T Consensus 70 ~~~E~~il~~l~h-----------------~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 132 (308)
T d1p4oa_ 70 FLNEASVMKEFNC-----------------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 132 (308)
T ss_dssp HHHHHHHGGGCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred HHHHHHHHHHcCC-----------------CCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCH
Confidence 4556655554422 11122222322 4667999999999999876442211 1233
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..+...+.++. +..+|..+++|||+||.|||++.+ ++++|+|||+++.+..
T Consensus 133 ~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~--~~~Kl~DFGla~~~~~ 185 (308)
T d1p4oa_ 133 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYE 185 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT--CCEEECCTTCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC--ceEEEeecccceeccC
Confidence 44444444433 778899999999999999999865 8999999999987644
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=4.2e-14 Score=154.11 Aligned_cols=142 Identities=15% Similarity=0.165 Sum_probs=96.6
Q ss_pred ccccccceeEEEEEEeC------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccC
Q 002092 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (968)
+.||+||||.||+|+++ +++.||||+.+++.... .+..
T Consensus 29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~------------------------------------~~~~ 72 (311)
T d1t46a_ 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT------------------------------------EREA 72 (311)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHH------------------------------------HHHH
Confidence 58999999999999862 56799999987643211 0112
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee-cCCCeEEecccCCCCCCCHHHHHh-------------
Q 002092 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 262 (968)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (968)
|.+|+..+.++.+ ++. |.+=.++. ....+|||||++|.+|.+......
T Consensus 73 ~~~E~~~~~~l~~-----------------HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 135 (311)
T d1t46a_ 73 LMSELKVLSYLGN-----------------HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135 (311)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC----------
T ss_pred HHHHHHHHHhccC-----------------CCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccc
Confidence 4456666665521 112 22222222 345799999999998877643211
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 ----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.++. +..+|..|++|||+||.||+++.+ +.++++|||+++.+..
T Consensus 136 ~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~--~~~ki~DfG~~~~~~~ 197 (311)
T d1t46a_ 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIKN 197 (311)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT--TEEEECCCGGGSCTTS
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc--CcccccccchheeccC
Confidence 1244444444444444 788999999999999999999865 8999999999987653
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.5e-14 Score=156.74 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=98.1
Q ss_pred ccccccceeEEEEEEeC----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~----~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
+.||+|+||.||+|+.. +|+.||||+.+...... |- ...-.+.
T Consensus 30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~---~~------------------------------~~~~~~~ 76 (322)
T d1vzoa_ 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---KA------------------------------KTTEHTR 76 (322)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---EE------------------------------SSGGGCC
T ss_pred EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc---ch------------------------------HHHHHHH
Confidence 68999999999999852 58999999876421100 00 0001255
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (968)
+|++.+.++++.- .-+.+=..+. ....+++|||++|.+|.+.... ........+...+.+++
T Consensus 77 ~E~~il~~l~h~p----------------nIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~-~~~~~e~~~~~~~~Qi~ 139 (322)
T d1vzoa_ 77 TERQVLEHIRQSP----------------FLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIV 139 (322)
T ss_dssp CHHHHHHHHHTCT----------------TBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCC----------------eEEEeeeeeccCCceeeeeecccccHHHHHHHh-cccccHHHHHHHHHHHH
Confidence 6778888886520 0111112222 4566899999999998776432 22334333333333333
Q ss_pred --HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+..+|..|++|||+||.|||++.+ |.++|+|||+++.+...
T Consensus 140 ~al~~lH~~~ivHrDiKp~Nill~~~--~~vkL~DFG~a~~~~~~ 182 (322)
T d1vzoa_ 140 LALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVAD 182 (322)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEESCSSEEEECCGG
T ss_pred HHHHHhhcCCEEeccCCccceeecCC--CCEEEeeccchhhhccc
Confidence 778999999999999999999965 89999999999887653
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.1e-14 Score=155.89 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=57.7
Q ss_pred CeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--HHHHHh--------cCccccCCCCCceEEecCCCCceEEEe
Q 002092 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV--------DGFFNGDPHPGNFLVSKDPPHRPILLD 311 (968)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~--------~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (968)
.+|||||+++.+|.+.. .....+.........++. +..+|. .|++|||+||+||||+.+ +.++|+|
T Consensus 76 ~~lv~Ey~~~g~L~~~l--~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~--~~~Kl~D 151 (303)
T d1vjya_ 76 LWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT--SCEEECC
T ss_pred EEEEEecccCCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC--CCeEEEe
Confidence 47999999999998874 445566655555444443 555664 599999999999999865 8999999
Q ss_pred cccccccCH
Q 002092 312 FGLTKKLSS 320 (968)
Q Consensus 312 FG~~~~l~~ 320 (968)
||+++.+..
T Consensus 152 FGl~~~~~~ 160 (303)
T d1vjya_ 152 LGLAVRHDS 160 (303)
T ss_dssp CTTCEEEET
T ss_pred cCccccccC
Confidence 999887643
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=6.4e-14 Score=151.75 Aligned_cols=143 Identities=18% Similarity=0.213 Sum_probs=91.7
Q ss_pred ccccccceeEEEEEEeC--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhc
Q 002092 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~--------~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (968)
+.||+|+||+||+|+.. ++..||||+.+++..+.-.
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~------------------------------------ 62 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL------------------------------------ 62 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHH------------------------------------
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHH------------------------------------
Confidence 68999999999999863 2357999998765432211
Q ss_pred cCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHh------------
Q 002092 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------ 262 (968)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------ 262 (968)
.++.+|...+.++.+. ..-|.+-.++. ....++||||++|++|.+......
T Consensus 63 ~~~~~e~~~l~~~~~H----------------pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~ 126 (299)
T d1fgka_ 63 SDLISEMEMMKMIGKH----------------KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 126 (299)
T ss_dssp HHHHHHHHHHHHHCCC----------------TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC----------
T ss_pred HHHHHHHHHHHHhcCC----------------CeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCcccccccccc
Confidence 1234455555554210 11122223333 456789999999999987753221
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 263 ---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
..++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|.|||+++.+..
T Consensus 127 ~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~--~~~kl~dfg~~~~~~~ 187 (299)
T d1fgka_ 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIHH 187 (299)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSTTCCCCGGG
T ss_pred CccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC--CCeEeccchhhccccc
Confidence 1244445554444443 778999999999999999999966 8999999999987754
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.3e-14 Score=153.12 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=94.5
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+. .+|+.||||+.+...... .... .+.+|.
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~-------------------------~~~~----------~~~~E~ 52 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-------------------------GVPS----------SALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-------------------------THHH----------HHHHHH
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCCh-------------------------HHHH----------HHHHHH
Confidence 4799999999999997 589999999986432110 0000 123344
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHHHHH--H
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (968)
..+..+++ ..-+.+-..+. ....++|||++.|..+..+.. .........+...+.+++ +
T Consensus 53 ~il~~l~h-----------------~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL 114 (292)
T d1unla_ 53 CLLKELKH-----------------KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGL 114 (292)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCc-----------------CCEEeeccccccccceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHH
Confidence 44433221 11122223333 455689999999988765532 223444444444444444 7
Q ss_pred HHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
+.+|..|++|||+||+|||++.+ +.++|+|||.+..+..
T Consensus 115 ~~lH~~~IvHrDiKP~NIli~~~--~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 115 GFCHSRNVLHRDLKPQNLLINRN--GELKLANFGLARAFGI 153 (292)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHhhcCCEeeecccCcccccccC--CceeeeecchhhcccC
Confidence 88999999999999999999865 7899999999987754
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=6.2e-14 Score=152.11 Aligned_cols=145 Identities=19% Similarity=0.190 Sum_probs=92.6
Q ss_pred ccccccceeEEEEEEe-CC-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHH
Q 002092 124 TPLATASIAQVHRATL-VD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~-G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (968)
+.||+|+||.||+|+. ++ ++.||||+.+......- ....+.+|
T Consensus 13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~-----------------------------------~~~~~~~E 57 (305)
T d1blxa_ 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-----------------------------------MPLSTIRE 57 (305)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-----------------------------------CBCTHHHH
T ss_pred EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch-----------------------------------HHHHHHHH
Confidence 4699999999999997 44 67799998764322110 01123345
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCCc-eEeeeeee------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHH
Q 002092 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (968)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (968)
...+..+... . ++. +.+=.++. ....+++|||++|..+.........+.+...+...+
T Consensus 58 ~~~l~~l~~~-~--------------HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (305)
T d1blxa_ 58 VAVLRHLETF-E--------------HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 122 (305)
T ss_dssp HHHHHHHHHT-C--------------CTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHH
T ss_pred HHHHHHHhhc-C--------------CCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHH
Confidence 5555555431 0 111 11212221 234589999999876543322223345555544444
Q ss_pred HHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
.+++ +..+|.+|++|||+||.|||++.+ +.++|+|||+++....
T Consensus 123 ~qi~~aL~yLH~~~ivHrDiKp~NILi~~~--~~~kl~dfg~~~~~~~ 168 (305)
T d1blxa_ 123 FQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSF 168 (305)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECSCCSCCCCCG
T ss_pred HHHHHHHHHHHhCCEEecCCCccEEEEcCC--CCeeecchhhhhhhcc
Confidence 4443 778999999999999999999865 8999999999886654
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=4.5e-14 Score=149.96 Aligned_cols=135 Identities=20% Similarity=0.233 Sum_probs=89.3
Q ss_pred ccccccceeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHH
Q 002092 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (968)
+.||+|+||.||+|++ .|++||||+.+..-. .+ +|.+|++
T Consensus 13 ~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~~-----------------------------~~----------~~~~E~~ 52 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT-----------------------------AQ----------AFLAEAS 52 (262)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------------------------------H----------HHHHTHH
T ss_pred EEEecCCCeEEEEEEE-CCeEEEEEEECcHHH-----------------------------HH----------HHHHHHH
Confidence 5699999999999998 588999998753211 01 1334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-----cCCCeEEecccCCCCCCCHHHHHh-cCCCHHHHHHHHHHH
Q 002092 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (968)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (968)
.+.++++ +. |-+++. ....+|||||++|++|.+...... ..++...+...+.++
T Consensus 53 ~l~~l~H------------------pn--Iv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i 112 (262)
T d1byga_ 53 VMTQLRH------------------SN--LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 112 (262)
T ss_dssp HHTTCCC------------------TT--BCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHhCCC------------------CC--EeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 5544422 11 222232 234589999999999988754322 235555555554444
Q ss_pred H--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
. +..+|..|++|+|+||.||+++.+ +.++|.|||+++..+.
T Consensus 113 ~~al~ylH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 113 CEAMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 155 (262)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HhhccccccCceeccccchHhheecCC--CCEeecccccceecCC
Confidence 4 778999999999999999999965 8999999999986654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=6.6e-14 Score=152.39 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=92.4
Q ss_pred ccccccceeEEEEEEeC-CCCE--EEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~--VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (968)
+.||+|+||.||+|+.+ +|.. ||||..+....+. ..-+|.+
T Consensus 16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~ 59 (309)
T d1fvra_ 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 59 (309)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChH------------------------------------HHHHHHH
Confidence 68999999999999975 5654 6677654322111 0112556
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-cCCCeEEecccCCCCCCCHHHHH---------------hcC
Q 002092 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---------------AFG 264 (968)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---------------~~~ 264 (968)
|++.+.++.+ ...-+.+=.++. .+..++||||++|++|.++.... ...
T Consensus 60 E~~~l~~l~~----------------HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 123 (309)
T d1fvra_ 60 ELEVLCKLGH----------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 123 (309)
T ss_dssp HHHHHTTCCC----------------CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCS
T ss_pred HHHHHHhccC----------------CCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCC
Confidence 6666555421 011122222222 45678999999999998874311 123
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCH
Q 002092 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (968)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (968)
++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|.|||+++....
T Consensus 124 l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~--~~~kl~DfG~a~~~~~ 179 (309)
T d1fvra_ 124 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRGQEV 179 (309)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEESSCE
T ss_pred CCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC--CceEEccccccccccc
Confidence 44444444444433 678999999999999999999976 8999999999876543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=1.4e-13 Score=150.39 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=89.4
Q ss_pred ccccccceeEEEEEEe-CCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l-~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|++|.||+|+. ++|+.||||+.+...... . ...++.+|.
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-------------------------~----------~~~~~~~E~ 60 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-------------------------G----------FPITALREI 60 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----CTT-------------------------S----------SCHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch-------------------------H----------HHHHHHHHH
Confidence 5799999999999997 589999999864321100 0 011234566
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee---------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (968)
..+.++++. ..+.+..++. ...-++||||+++..+.... ..........+...
T Consensus 61 ~il~~l~h~-----------------nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i 122 (318)
T d3blha1 61 KILQLLKHE-----------------NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRV 122 (318)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEC----------CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHH
T ss_pred HHHHHhcCC-----------------CccceEeeeecccccccccCceEEEEEeccCCCccchhh-hcccccccHHHHHH
Confidence 666555321 1122222221 12347999999876543221 11223344443333
Q ss_pred HHHHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
+.+++ +..+|..|++|||+||.|||++.+ +.++|.|||++..++..
T Consensus 123 ~~qil~~l~~lH~~~ivHrDlKp~NILl~~~--~~~kl~dfg~~~~~~~~ 170 (318)
T d3blha1 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLA 170 (318)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCC-
T ss_pred HHHHHHHHHHhccCCEEecCcCchheeecCC--CcEEeeecceeeecccc
Confidence 33333 778899999999999999999865 89999999999877653
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=7.2e-13 Score=146.95 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=86.7
Q ss_pred ccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHH
Q 002092 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (968)
Q Consensus 124 ~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (968)
+.||+|+||.||+|+.+ +|+.||||+.+......-. . . .+.+|.
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~--~---------------------------~------~~~~Ei 67 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--A---------------------------K------RAYREL 67 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHH--H---------------------------H------HHHHHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHH--H---------------------------H------HHHHHH
Confidence 68999999999999974 7999999998654321100 0 0 123455
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee-------cCCCeEEecccCCCCCCCHHHHHhcCCCHHHHHHHHH
Q 002092 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (968)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (968)
..+.++.+. .-+.+=.++. .+..++||||+.|..+... ...++...+...+.
T Consensus 68 ~il~~l~hp-----------------nIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~----~~~~~~~~i~~~~~ 126 (355)
T d2b1pa1 68 VLMKCVNHK-----------------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLY 126 (355)
T ss_dssp HHHHHCCCT-----------------TBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHH----TSCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CeeEEEEEEecccccccCceeEEEEeccchHHHHhh----hcCCCHHHHHHHHH
Confidence 555444220 0111112221 2345899999988654332 23456555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCceEEecCCCCceEEEecccccccCHHH
Q 002092 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (968)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (968)
+++ +..+|..|++|||+||.|||++.+ +.++++|||+++..+...
T Consensus 127 qil~gl~~LH~~giiHrDlKP~Nil~~~~--~~~kl~df~~~~~~~~~~ 173 (355)
T d2b1pa1 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTSF 173 (355)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC--------
T ss_pred HHHHHHHHhhhcccccccCCccccccccc--cceeeechhhhhcccccc
Confidence 544 788999999999999999999965 889999999988765543
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.09 E-value=3.8e-11 Score=132.83 Aligned_cols=80 Identities=14% Similarity=0.000 Sum_probs=48.0
Q ss_pred CCCeEEecccCCCCCCCHHHH--HhcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCceEEecCCC----CceEEE
Q 002092 240 SETVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPP----HRPILL 310 (968)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~--~~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~----g~i~Li 310 (968)
...+++|+++.+......... .........+...+.+++ +..+|. .|++|||+||+|||++.++. ..++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~ 174 (362)
T d1q8ya_ 95 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA 174 (362)
T ss_dssp TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEe
Confidence 344667777654432221111 112233333333333333 666776 99999999999999986422 248999
Q ss_pred ecccccccC
Q 002092 311 DFGLTKKLS 319 (968)
Q Consensus 311 DFG~~~~l~ 319 (968)
|||.+....
T Consensus 175 dfg~s~~~~ 183 (362)
T d1q8ya_ 175 DLGNACWYD 183 (362)
T ss_dssp CCTTCEETT
T ss_pred ecccccccc
Confidence 999987664
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.61 E-value=5.3e-08 Score=101.16 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=54.6
Q ss_pred cccccccccc-eeEEEEEEeCCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcH
Q 002092 121 FVETPLATAS-IAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (968)
Q Consensus 121 ~d~~plgsaS-igqV~~A~l~~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (968)
.+-+|++.|. -++||+....+|..++||+.+++-.. ++.
T Consensus 13 ~~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~----------------------------------------~l~ 52 (255)
T d1nd4a_ 13 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALN----------------------------------------ELQ 52 (255)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTS----------------------------------------CHH
T ss_pred CceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHh----------------------------------------HHH
Confidence 3335666655 58999999888888999998876432 233
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee----cCCCeEEecccCCCCCCC
Q 002092 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLND 256 (968)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~ 256 (968)
.|++.++.+.. .++.||+++. .+..++||||++|.++.+
T Consensus 53 ~E~~~l~~L~~------------------~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 53 DEAARLSWLAT------------------TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp HHHHHHHHHHT------------------TTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred HHHHHHHHHHh------------------cCCCCCceeeecccccceEEEEEeeecccccc
Confidence 45555555543 1466899885 345689999999998865
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=98.29 E-value=4.5e-07 Score=98.05 Aligned_cols=52 Identities=21% Similarity=0.146 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCCh
Q 002092 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (968)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~i 154 (968)
..+.+.+...++ ++|-..+.- -.|++ +.--+||++++.+|+.||+||.||+.
T Consensus 7 ~L~pd~i~~al~-~~g~~~~~~-----~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~ 58 (325)
T d1zyla1 7 TLHPDTIMDALF-EHGIRVDSG-----LTPLN-SYENRVYQFQDEDRRRFVVKFYRPER 58 (325)
T ss_dssp CCCHHHHHHHHH-HTTCCCCSC-----CEEEC-CSSSEEEEECCTTCCCEEEEEECTTT
T ss_pred ccCHHHHHHHHH-HcCCCCCcC-----ccccc-cccceeEEEEcCCCCEEEEEEeCCCC
Confidence 445666666655 456433321 12443 23459999999999999999999984
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.28 E-value=1.2e-06 Score=90.93 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=26.9
Q ss_pred CccccCCCCCceEEecCCCCceEEEecccccccCHH
Q 002092 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (968)
Q Consensus 286 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (968)
.++|+|+||+|||++++ +.+.||||+.++.-++.
T Consensus 184 ~l~HgD~~~~Nil~~~~--~~~~lIDwe~a~~g~~~ 217 (263)
T d1j7la_ 184 VFSHGDLGDSNIFVKDG--KVSGFIDLGRSGRADKW 217 (263)
T ss_dssp EEECSCCCTTSEEEETT--EEEEECCCTTCEEEEHH
T ss_pred EEEEeeccCcceeecCC--ceEEEeechhcccCCHH
Confidence 48999999999999843 33469999998875543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.15 E-value=7.6e-06 Score=90.47 Aligned_cols=110 Identities=12% Similarity=0.120 Sum_probs=63.1
Q ss_pred CCCCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeC-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHH
Q 002092 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWI 172 (968)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~-~G~~VAVKV~~p~i~~~~~~Dl~~l~~l~~~~ 172 (968)
+.|+..+.+.... ..+|.-.. -..++-++||-|.+..||+.+.. +|+.|+||.-.|.++..-
T Consensus 5 ~e~Lt~~~~~~la-~~lg~~~~--~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g-------------- 67 (392)
T d2pula1 5 YETLNESSAVALA-VKLGLFPS--KSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVG-------------- 67 (392)
T ss_dssp CCCCCHHHHHHHH-HHTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC----------------
T ss_pred CccCCHHHHHHHH-HHcCCCCC--CCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccC--------------
Confidence 3455555555443 34553111 12445568999999999999874 578999997777543110
Q ss_pred HHhCCCCCCcchHHHHHHhhhhccC-cHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeee--cCCCeEEeccc
Q 002092 173 AWAEPQYDFNPIIDEWCKEAPKELD-FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFM 249 (968)
Q Consensus 173 ~~~~~~~~~~~~~~e~~~~l~~Eld-~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i 249 (968)
+.+.+ -++ .+.|++.+..+.. ..+..+|+++. ....++||||+
T Consensus 68 ----~~~~~-------------~~~R~~~E~~~L~~~~~-----------------~~p~~vP~v~~~d~~~~~lvmE~L 113 (392)
T d2pula1 68 ----ESWPL-------------TIDRARIESSALIRQGE-----------------HVPHLVPRVFYSDTEMAVTVMEDL 113 (392)
T ss_dssp ----CCCCC-------------CTTHHHHHHHHHHHHHT-----------------TCGGGSCCEEEEETTTTEEEECCC
T ss_pred ----CCCCC-------------CHHHHHHHHHHHHHhhh-----------------hCCCCcceEEEEcCCCCEEEEecc
Confidence 00000 001 1246656555443 22456899886 56779999999
Q ss_pred CCCCC
Q 002092 250 DGIRL 254 (968)
Q Consensus 250 ~G~~L 254 (968)
+|..+
T Consensus 114 ~~~~~ 118 (392)
T d2pula1 114 SHLKI 118 (392)
T ss_dssp TTSEE
T ss_pred CCccc
Confidence 98654
|
| >d1tvfa2 e.3.1.1 (A:15-315) Pencillin binding protein 4 (PbpD), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Pencillin binding protein 4 (PbpD), N-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=97.68 E-value=0.0002 Score=75.36 Aligned_cols=53 Identities=21% Similarity=0.251 Sum_probs=44.0
Q ss_pred cceEEEEEEcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 496 LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 496 ~G~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
+..+|.+...|+++|++ ++|..+.+||+||.+|+.+++..+++|+++||++|.
T Consensus 35 ~~a~iv~~~TG~VLy~k-------------Na~~~~~pAS~tKlMTa~v~le~i~~g~~~l~~~v~ 87 (301)
T d1tvfa2 35 PTSAVNVSQTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT 87 (301)
T ss_dssp CSEEEEEETTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred cceEEEEcCCCcEehee-------------CcCCCcCchHHHHHHHHHHHHHHHhcCCCCcccCeE
Confidence 34555556788888743 567889999999999999999999999999999764
|
| >d1iysa_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TOHO-1 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Escherichia coli, TOHO-1 [TaxId: 562]
Probab=97.51 E-value=0.0016 Score=66.55 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.++++.+++|++++|++|.
T Consensus 34 n~d~~~~~AS~~Kl~~~~~~l~~v~~g~l~~~~~v~ 69 (261)
T d1iysa_ 34 RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVE 69 (261)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTSCTTSTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHhhhcCCCCcCceEE
Confidence 468899999999999999999999999999999876
|
| >d1o7ea_ e.3.1.1 (A:) beta-Lactamase, class A {Stenotrophomonas maltophilia, L2 [TaxId: 40324]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Stenotrophomonas maltophilia, L2 [TaxId: 40324]
Probab=97.50 E-value=0.00069 Score=70.05 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
..|+.|++||++|.+++.+++..+++|+++||++|.
T Consensus 38 ~~d~~~p~AS~~Kl~~~~~~l~~~~~g~~~ld~~v~ 73 (267)
T d1o7ea_ 38 RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVP 73 (267)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCCCCcEEE
Confidence 568899999999999999999999999999999874
|
| >d1m40a_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TEM-1 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Escherichia coli, TEM-1 [TaxId: 562]
Probab=97.46 E-value=0.0023 Score=65.59 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++++++..++.|++++|++|.
T Consensus 36 n~d~~~p~AS~~Kl~~~~~~l~~v~~g~~~~~~~v~ 71 (263)
T d1m40a_ 36 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 71 (263)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCcccchHHHHHHHHHHHHHhhhcCCcCCCceEE
Confidence 567889999999999999999999999999999983
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.44 E-value=0.00033 Score=74.15 Aligned_cols=51 Identities=6% Similarity=0.111 Sum_probs=33.1
Q ss_pred CCCHHHHHHHHHhhhCCCccccccccccccccccceeEEEEEEeCCCCEEEEEEecCC
Q 002092 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (968)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~plgsaSigqV~~A~l~~G~~VAVKV~~p~ 153 (968)
+.+.++++.+++. ++ +.++ . +-++|.+|..-+.|+.+..+|+ .++||.+++
T Consensus 2 ~ls~~el~~~l~~-Y~--lg~~-~--~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~ 52 (316)
T d2ppqa1 2 DITEDELRNFLTQ-YD--VGSL-T--SYKGIAEGVENSNFLLHTTKDP-LILTLYEKR 52 (316)
T ss_dssp CCCHHHHHHHHTT-BC--CCCE-E--EEEEECC---EEEEEEEESSCC-EEEEEECC-
T ss_pred CCCHHHHHHHHHh-CC--CCCc-e--EeecCCCCcccCeEEEEECCCc-EEEEEcCCC
Confidence 4567888888754 54 3332 1 2268999999999999876664 899997664
|
| >d1n9ba_ e.3.1.1 (A:) beta-Lactamase, class A {Klebsiella pneumoniae, SHV-2 [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Klebsiella pneumoniae, SHV-2 [TaxId: 573]
Probab=97.28 E-value=0.0016 Score=66.81 Aligned_cols=36 Identities=33% Similarity=0.465 Sum_probs=34.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|+.|..||++|.+++.++++.+++|++++|++|.
T Consensus 36 n~d~~~~~AS~~Kl~~a~~~l~~v~~g~~~~~~~v~ 71 (265)
T d1n9ba_ 36 RADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIH 71 (265)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhcCCCCCceEEE
Confidence 678999999999999999999999999999999886
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.22 E-value=0.00032 Score=77.05 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=69.7
Q ss_pred hcCCCCC--HHHHHHHHHhhhCCCcccc-ccccccccccccceeEEEEEEeCC--------CCEEEEEEecCChhhhhHh
Q 002092 92 DSLPPRP--VQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIILE 160 (968)
Q Consensus 92 d~~p~~~--~~~v~~~l~~elg~~~~~~-f~~~d~~plgsaSigqV~~A~l~~--------G~~VAVKV~~p~i~~~~~~ 160 (968)
.++...| -+.++.++.+-++..|..+ .+.+.-++|+.|-.-++|+....+ ++.|+++|-- +....
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~--- 88 (395)
T d1nw1a_ 13 TDANTIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETE--- 88 (395)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCH---
T ss_pred ccccccchHHHHHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccchh---
Confidence 3444444 3446667777787666543 235666899999999999998754 3678888743 21111
Q ss_pred hHHHHHHHHHHHHHhCCCCCCcchHHHHHHhhhhccCcHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCceEeeeeeecC
Q 002092 161 DLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240 (968)
Q Consensus 161 Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~ 240 (968)
+|..+|.++++.+... ++ .|+++...
T Consensus 89 -----------------------------------idr~~E~~i~~~ls~~------------------gl-~Pkll~~~ 114 (395)
T d1nw1a_ 89 -----------------------------------SHLVAESVIFTLLSER------------------HL-GPKLYGIF 114 (395)
T ss_dssp -----------------------------------HHHHHHHHHHHHHHHT------------------TS-SSCEEEEE
T ss_pred -----------------------------------hHHHHHHHHHHHHHhC------------------CC-CCeEEEEc
Confidence 1223466666666541 23 68888866
Q ss_pred CCeEEecccCCCCCCC
Q 002092 241 ETVLILEFMDGIRLND 256 (968)
Q Consensus 241 ~~vLVmE~i~G~~L~~ 256 (968)
...+||||++|.++..
T Consensus 115 ~~g~I~efi~g~~l~~ 130 (395)
T d1nw1a_ 115 SGGRLEEYIPSRPLSC 130 (395)
T ss_dssp TTEEEECCCCEEECCT
T ss_pred CCceEEEEeccccCCh
Confidence 6789999999988764
|
| >d1bsga_ e.3.1.1 (A:) beta-Lactamase, class A {Streptomyces albus G [TaxId: 1962]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Streptomyces albus G [TaxId: 1962]
Probab=97.12 E-value=0.0038 Score=63.95 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=33.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCch
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv 560 (968)
++|..|..||++|.+++.++++.+++|+++|++++
T Consensus 34 n~d~~~~~AS~~Kl~~~~~~l~~~~~g~~~~~~~~ 68 (266)
T d1bsga_ 34 RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRI 68 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCccceee
Confidence 56899999999999999999999999999999987
|
| >d3beca2 e.3.1.1 (A:4-262) Penicillin-binding protein 5, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 5, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.0011 Score=68.18 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=32.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|...++||+||.+|+.+++..+++|++++++.|.
T Consensus 32 n~~~~~~~ASlTKlMTa~v~l~~~~~~~l~~~~~v~ 67 (259)
T d3beca2 32 NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 67 (259)
T ss_dssp STTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CcCCCcCChHHHHHHHHHHHHHHHHhCCCCccccee
Confidence 567889999999999999999999999999998764
|
| >d1g6aa_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]
Probab=97.05 E-value=0.0024 Score=65.57 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||+.|.++++++++.+++|++++++++.
T Consensus 37 n~~~~~p~AS~~Kl~~a~~~l~~~~~g~l~~~~~i~ 72 (266)
T d1g6aa_ 37 NGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVE 72 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeecchHHHHHHHHHHHHHHHHcCCCCccceEE
Confidence 567889999999999999999999999999999885
|
| >d1es5a_ e.3.1.1 (A:) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., K15 [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., K15 [TaxId: 1931]
Probab=96.89 E-value=0.0015 Score=66.99 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=28.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..+++||+||.+|+.+++ ++|+++||+.|.
T Consensus 24 na~~~~~~AS~tKlmTa~v~l---~~~~~~ld~~vt 56 (260)
T d1es5a_ 24 AADTRRSTGSTTKIMTAKVVL---AQSNLNLDAKVT 56 (260)
T ss_dssp STTCCBCCGGGGHHHHHHHHH---TCTTCCTTCEEE
T ss_pred CcCCCcCCHHHHHHHHHHHHH---HcCCCCCCceEE
Confidence 567889999999999998864 889999999764
|
| >d1i2sa_ e.3.1.1 (A:) beta-Lactamase, class A {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Bacillus licheniformis [TaxId: 1402]
Probab=96.75 E-value=0.0071 Score=61.45 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=27.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCch
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv 560 (968)
++|..|..||++|.+++.++++.+++|+ ||+++
T Consensus 30 n~d~~~~~AS~~Kl~~~~~~l~~~~~g~--Ld~~v 62 (255)
T d1i2sa_ 30 RPDERFAFASTIKALTVGVLLQQKSIED--LNQRI 62 (255)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHSCTGG--GGCEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHcccCC--Cccce
Confidence 4588999999999999999998888775 45543
|
| >d1xp4a2 e.3.1.1 (A:25-293) D,D-carboxypeptidase DacA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D,D-carboxypeptidase DacA, N-terminal domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.73 E-value=0.006 Score=62.74 Aligned_cols=45 Identities=20% Similarity=0.343 Sum_probs=38.4
Q ss_pred EcCeEEEEeeeecCCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
..|++++++ ++|....+||+||.+|+.+++..+++|+|+++++|.
T Consensus 14 ~tG~vL~~k-------------n~~~~~~pAS~TKlmTa~v~le~l~~g~l~~~~~v~ 58 (269)
T d1xp4a2 14 NTGKILYEK-------------DATQPVEIASITKLITVYLVYEALENGSITLSTPVD 58 (269)
T ss_dssp TTTEEEEEE-------------SCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCEeeee-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 347777743 457889999999999999999999999999999865
|
| >d2cc1a1 e.3.1.1 (A:27-293) beta-Lactamase, class A {Mycobacterium fortuitum [TaxId: 1766]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Mycobacterium fortuitum [TaxId: 1766]
Probab=96.48 E-value=0.0027 Score=65.01 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=33.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.++++.+++|++++|++|.
T Consensus 34 n~d~~~~~AS~~Kl~~a~~~l~~~~~g~~~~~~~v~ 69 (262)
T d2cc1a1 34 RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVF 69 (262)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHhhccCcccCceEE
Confidence 568899999999999999999999999999999875
|
| >d1djaa_ e.3.1.1 (A:) beta-Lactamase, class A {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Staphylococcus aureus [TaxId: 1280]
Probab=96.20 E-value=0.0091 Score=60.72 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=26.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCC
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~ 555 (968)
+.|..|..||++|.+|+.++++.+++|+|+
T Consensus 31 n~d~~~~~AS~~Kl~~a~~~l~~~~~~~Ld 60 (258)
T d1djaa_ 31 NSDKRFAYASTSHAINSAILLEQVPYNKLN 60 (258)
T ss_dssp STTSCEECGGGHHHHHHHHHHTSSCGGGTT
T ss_pred CCCCcCccHHHHHHHHHHHHHHhccccCcC
Confidence 568899999999999999999999988753
|
| >d1e25a_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PER-1 [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Pseudomonas aeruginosa, PER-1 [TaxId: 287]
Probab=96.03 E-value=0.0033 Score=64.73 Aligned_cols=36 Identities=36% Similarity=0.426 Sum_probs=34.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|+.||++|.+|++++++.+++|+++||++|.
T Consensus 35 n~~~~~p~AS~~Kl~~~~~~l~~i~~g~l~l~~~v~ 70 (278)
T d1e25a_ 35 NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVI 70 (278)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHHcCCCCchhhcc
Confidence 678899999999999999999999999999999985
|
| >d1buea_ e.3.1.1 (A:) beta-Lactamase, class A {Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]
Probab=93.45 E-value=0.023 Score=57.78 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=33.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCCCccCchh
Q 002092 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (968)
Q Consensus 526 ~~dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~ 561 (968)
++|..|..||++|.+++.++++.+++|+++|+++|.
T Consensus 35 n~~~~~p~AS~~Kl~~a~~~l~~i~~g~~~~~~~v~ 70 (265)
T d1buea_ 35 RANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVN 70 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCCcccceE
Confidence 457889999999999999999999999999999874
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.30 E-value=0.56 Score=49.58 Aligned_cols=83 Identities=14% Similarity=0.042 Sum_probs=45.6
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEE--EcCeEEEEeeeecCCC------CCCCCC---CCCCcceeecchHHHHHHH
Q 002092 476 SDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGR------YDPRPV---QPDSLFPVFSVTKGITAGM 544 (968)
Q Consensus 476 ~~l~~~l~~~l~~~~~~~~~~G~~v~V~--~~g~~v~~~~~G~~~~------~~~~~~---~~dt~f~i~S~SK~~ta~~ 544 (968)
.++++.+++.+++..++..-..+++.|+ +.|+++.-..+=.-|. ....+. .....|.-||+-|+||+++
T Consensus 4 ~~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~~aa 83 (368)
T d1pyya4 4 SPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMMLAA 83 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEEEEEECCCCcEEEEEeCCCCCcccccCccchhhhhhhhhhCccCCcchhhhHHHHH
Confidence 3555666666665554333344445555 4677776432211111 011111 1124577899999998776
Q ss_pred HHHHHHCCCCCccCchh
Q 002092 545 LHWLVDNGKLKLEENIA 561 (968)
Q Consensus 545 i~~lve~G~l~Ld~pv~ 561 (968)
+ +|+|.++.++.+.
T Consensus 84 a---Le~g~~~~~~~~~ 97 (368)
T d1pyya4 84 A---IDNNTFPGGEVFN 97 (368)
T ss_dssp H---HHTTCCCTTCEEE
T ss_pred h---hhccccccccccc
Confidence 5 4889888776554
|
| >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2, PBP2 species: Staphylococcus aureus [TaxId: 1280]
Probab=81.68 E-value=5.2 Score=42.19 Aligned_cols=84 Identities=19% Similarity=0.065 Sum_probs=46.2
Q ss_pred CCchHHHHHHHHHHHhccCC-CccceEEEEE--EcCeEEEEeeeecCCCCCCCC-CCCCCcceeecchHHHHHHHHHHHH
Q 002092 474 IHSDVEAKLRDFLVELGNDG-KILGIQVCAY--KDGEVIIDTSAGMLGRYDPRP-VQPDSLFPVFSVTKGITAGMLHWLV 549 (968)
Q Consensus 474 ~~~~l~~~l~~~l~~~~~~~-~~~G~~v~V~--~~g~~v~~~~~G~~~~~~~~~-~~~dt~f~i~S~SK~~ta~~i~~lv 549 (968)
...++++.+++.+++..... .-..+++.|+ +.|+++. ..|..+.....- ......+..||.-|+|++.++ +.
T Consensus 43 lD~~lQ~~ae~~l~~~~~~~~~~~~~a~vvvd~~TG~IlA--m~~~~~y~~~~~~n~~~~~~~pGStfKp~v~~aa--al 118 (400)
T d2olua2 43 MDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGLVA--ISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGP--AI 118 (400)
T ss_dssp CCHHHHHHHHHHHHHCSCCSSTTEEEEEEEEETTTCBEEE--EECSTTCCTTTSCCTTTSCEECGGGGHHHHTHHH--HH
T ss_pred CCHHHHHHHHHHHHhhhhccCcCceEEEEEEECCCCcEEE--EEECCCCCcchhhhhhhhccccccccccHHHHHH--Hh
Confidence 34566666666666643211 1122334444 4677664 344444322111 122346999999999864433 25
Q ss_pred HCCCCCccCchh
Q 002092 550 DNGKLKLEENIA 561 (968)
Q Consensus 550 e~G~l~Ld~pv~ 561 (968)
|+|.++.++.+.
T Consensus 119 e~g~~~~~~~~~ 130 (400)
T d2olua2 119 ENMKWATNHAIQ 130 (400)
T ss_dssp HHTCCCTTBEEE
T ss_pred hcCCeecceecc
Confidence 888888777654
|
| >d1nrfa_ e.3.1.1 (A:) Penicillin receptor BlaR, C-terminal domain {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin receptor BlaR, C-terminal domain species: Bacillus licheniformis [TaxId: 1402]
Probab=81.59 E-value=1.3 Score=43.67 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=25.4
Q ss_pred CCcceeecchHHHHHHHHHHHHHCCCCCccCchhh
Q 002092 528 DSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (968)
Q Consensus 528 dt~f~i~S~SK~~ta~~i~~lve~G~l~Ld~pv~~ 562 (968)
.+.|.-||+-|+++++++ .|.|.++.++.+..
T Consensus 44 ~~~y~PGStfK~~~~~aa---Le~g~~~~~~~~~~ 75 (246)
T d1nrfa_ 44 TSRFAPASTYKVFSALLA---LESGIITKNDSHMT 75 (246)
T ss_dssp HSCBCCGGGGHHHHHHHH---HHHTSSCSSCCCBC
T ss_pred cCCCCCCcHHHHHHHHHH---HHcCCCCCCceeee
Confidence 456888999999997776 48899998876643
|