BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002093
(967 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118489922|gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 787
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/786 (56%), Positives = 553/786 (70%), Gaps = 51/786 (6%)
Query: 204 SRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDL 263
S EA KKHSR++ KDRH DKS KSERE K K+RN D+K+RD++AAKK DLGKGH L
Sbjct: 31 SESEAVKKHSREVQ-KDRHVDKSRGKSERERKEKYRNGIDDKSRDRNAAKKHDLGKGHHL 89
Query: 264 KVSERKEKKESPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLP 323
+ SERKE+KES KS H RLKRRRSRSRE EDRNRRS+SLSPRA KR SY+ REH L
Sbjct: 90 ETSERKERKESSKSHHEELRLKRRRSRSREHEDRNRRSISLSPRAHKRGSYHKREHVELS 149
Query: 324 SHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPIN 383
HS K SGRQ SD +++++ + S H RRH G SGLGGYSPRKR+TEAA KTPSP
Sbjct: 150 LHSVKERSGRQQSDAENNQLANSSSSRHQRRHGGFASGLGGYSPRKRKTEAAVKTPSPAK 209
Query: 384 RSPEKKSAKWDVAPVETYSV-----PSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
RSPEKKSAKWD+AP ET +V SN + NQ ASSN HE+VS+ PV S KP +G+
Sbjct: 210 RSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQTASSNIHEVVSAVPVVSAPMKPPSGV 269
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
S+S+ VS +S+QLTQ+ P+RRL +EN+P SASEKA+M+ LNNFL+SSGV H+ G
Sbjct: 270 SLSSLSTATKVSTESIQLTQATHPIRRLYMENIPASASEKAVMDCLNNFLISSGVHHIQG 329
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK 558
+ PCI C+ Q+EKGQA VEFLT EDASAAL DG SFSGSI+K++RPK+F+EVA+GE EK
Sbjct: 330 TQPCISCIRQKEKGQALVEFLTPEDASAALSFDGRSFSGSIIKVRRPKDFIEVATGELEK 389
Query: 559 SVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAF 618
S A++D++ IVKDSPHKIFIGGIS+ LSSKM+MEI AFGPLKAY FE +D +EP AF
Sbjct: 390 SAAAIDAIGDIVKDSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFENRKDPDEPFAF 449
Query: 619 IEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP 678
+EY D+ VT KA AGLNG+K+GGQV+TA+QAV + S + GN F I +HA LL+KP
Sbjct: 450 LEYADESVTFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQISQHAKALLEKP 509
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACE 738
TEVLKLKNVF+ E SSLS EVEEVLEDVRLECARFGSVKS+NV+KY IST ++CE
Sbjct: 510 TEVLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARFGSVKSINVIKYAAITISTSKSCE 569
Query: 739 GNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKD 798
N++T SA Q+L D TN K + D K + E N++ D
Sbjct: 570 FNDDTVSAEATQSLGCDGTNPKTRNIRGSIDQKFM------------------EGNSIGD 611
Query: 799 NRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTC 858
++PAS M DEP Q ++D+DMAV+ A S+S+ SQ P V+ ++ DKVT
Sbjct: 612 DKPASDVMEDEPCQPGQVDSDMAVQDLACKSSSD--SQEPPQDVSD------SNVDKVTD 663
Query: 859 NIQLEHMSEENKSSAKED----------------LNLEEVNGNSE-AFTGASNEMGMQSS 901
+I++E + ENKS+A ED LNLEEV+G+ E AF S M M+ +
Sbjct: 664 DIEIEEVDAENKSTAGEDLNLKEVGDNKLMAGEELNLEEVSGDVEKAFVNDS--MEMKPN 721
Query: 902 AVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLY 961
++E GD + QD + G IFE GCVFVE+ R E +CMAAH LH RLFDDR V VEY+PL++Y
Sbjct: 722 SIEKGDCKEQDCSLGLIFERGCVFVEFRRTEGACMAAHCLHGRLFDDRAVVVEYVPLDIY 781
Query: 962 RARFSK 967
ARF K
Sbjct: 782 LARFPK 787
>gi|359477752|ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
Length = 895
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/987 (47%), Positives = 604/987 (61%), Gaps = 112/987 (11%)
Query: 1 MGRSGRKKEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSN 60
M RS R KEK+GK E L + EG+AARTRPFSFDEIM+RRK K L ++K+ A + N
Sbjct: 1 MSRSNRPKEKYGKSTELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGN 60
Query: 61 IPGDCTIENVSDDHKS--GRHHGHKKSPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQ 118
I ++NVSD ++S G H PG H+SE++VKV S KK++N K +
Sbjct: 61 ISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGNV 120
Query: 119 RDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKET 178
+D E+ + E KLK AK N T D +KE
Sbjct: 121 KDKESHNSEDKLK----AKPNKGMT-----------------------------DKSKEG 147
Query: 179 SSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKH 238
V K I + R + S E KK SRD GKDR+AD+S KSE+ESKRKH
Sbjct: 148 KINQRVHGRKKIDERSRRSSDD---SESEPEKKFSRDSVGKDRYADRS-RKSEKESKRKH 203
Query: 239 RNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRHGNSRLKRRRSRSRERE-DR 297
R +DEKNR++++ KK D GK H+ + +RKE++ESP SR+ SR KRRRSRSRER+ DR
Sbjct: 204 RTGEDEKNRERNSMKKHDPGKRHESEFLDRKERRESPPSRYEESRPKRRRSRSRERDKDR 263
Query: 298 NRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDG 357
++RS SLSPRAQKRTS++ REH L HS K SGRQHSD D +R++ NG S H+RRH G
Sbjct: 264 DKRSSSLSPRAQKRTSHHGREHAELSLHSLKDRSGRQHSDADRNRISNNGSSSHFRRHGG 323
Query: 358 STSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVET-----YSVPSNVHTSNQ 412
S SGLGGYSPRKRRTEAA KTPSP NRSPEKKSA WD+ P T SV S++
Sbjct: 324 SASGLGGYSPRKRRTEAAIKTPSPTNRSPEKKSAGWDLPPSRTDGMNAGSVLSSLQVLKP 383
Query: 413 AASSNAHEMVS----SDPVTSTTQK-PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLC 467
SSNA E+ S + PVT+TT K PL I A NVS+DS+QLTQ+ RPMRRL
Sbjct: 384 TVSSNADELPSAVPVAVPVTATTAKPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLY 443
Query: 468 VENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAA 527
VENLP+S+SEKALME LNNFLLSSG+ HV G+ PCI C+I +EKGQA VEFLT EDASAA
Sbjct: 444 VENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQALVEFLTPEDASAA 503
Query: 528 LCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLS 587
L DG SFSGSILKI+RPK+F
Sbjct: 504 LSFDGISFSGSILKIRRPKDF--------------------------------------- 524
Query: 588 SKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAV 647
+MEI AFGPLKAY F+VNED EPCAF+EYVDQ VT KA AGLNG+K+GGQVLT V
Sbjct: 525 ---LMEIAAAFGPLKAYRFQVNEDLGEPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTVV 581
Query: 648 QAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
QA+ + M+N+GN PF+GIP+HA PLL++PT+VLKLKNV NP+ SSLSE E+EE+LED
Sbjct: 582 QAIPNALAMENTGNLPFYGIPEHAKPLLERPTQVLKLKNVVNPDDLSSLSEAELEEILED 641
Query: 708 VRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEV 767
+RLEC RFG+VKSVN+VKY +S++ST++ E +NT G NL D + K E L
Sbjct: 642 IRLECTRFGTVKSVNIVKYNNSHVSTLEVYEAADNT-----GSNLGCDGNSMKAETLGGG 696
Query: 768 TDHKSIKNNELEILNDSKEVMEAGEV---NNVKDNRPASGTMGDEPSQLCELDTDMAVEY 824
TD+ S + ++ D K++ E EV N++ D++ + + +E + +D++ AV+
Sbjct: 697 TDNGSSDISGIKPPTDVKDLKEVDEVVERNSISDDKSLTDLIKNELCEPSHIDSNTAVKE 756
Query: 825 QARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNG 884
S+ + +G+P Q+N +K +DK IQ + + + + +E+ N
Sbjct: 757 PGCPDGSDDIPRGLPDQLNNMKHEVELRNDKAADVIQEDFIIKNKLMTVEEETN------ 810
Query: 885 NSEAFTGASNEM----GMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHS 940
G S E+ G++S D+E + +FE GCV VEY R EASCMAAH
Sbjct: 811 --RKLLGTSAELDSSPGIKSDFTGKNDSEKGLCDLDDMFEVGCVLVEYGRTEASCMAAHC 868
Query: 941 LHRRLFDDRIVAVEYIPLNLYRARFSK 967
LH R FDDR+V V Y+ L+LYR +F +
Sbjct: 869 LHGRYFDDRVVVVGYVALDLYRMKFPR 895
>gi|296083697|emb|CBI23686.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/959 (46%), Positives = 571/959 (59%), Gaps = 130/959 (13%)
Query: 16 EPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVSDDHK 75
E L + EG+AARTRPFSFDEIM+RRK K L ++K+ A + NI ++NVSD ++
Sbjct: 47 ELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGNISRKDIVKNVSDCYE 106
Query: 76 S--GRHHGHKKSPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKED 133
S G H PG H+SE++VKV S KK++N K + +D E+ + E KLK
Sbjct: 107 SDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGNVKDKESHNSEDKLK-- 164
Query: 134 YVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQ 193
AK N T D +KE V K I +
Sbjct: 165 --AKPNKGMT-----------------------------DKSKEGKINQRVHGRKKIDER 193
Query: 194 GRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK 253
R + S E KK SRD GKDR+AD+S KSE+ESKRKHR +DEKNR++++ K
Sbjct: 194 SRRSSDD---SESEPEKKFSRDSVGKDRYADRS-RKSEKESKRKHRTGEDEKNRERNSMK 249
Query: 254 KVDLGKGHDLKVSERKEKKESPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTS 313
K D GK RH + L R+ R
Sbjct: 250 KHDPGK------------------RHESEFLDRKERR----------------------- 268
Query: 314 YYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTE 373
E PS RQHSD D +R++ NG S H+RRH GS SGLGGYSPRKRRTE
Sbjct: 269 ------ESPPSR-------RQHSDADRNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTE 315
Query: 374 AAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQK 433
AA KTPSP NRSPEKKSA WD+ P T + + SN+ S+ + + PVT+TT K
Sbjct: 316 AAIKTPSPTNRSPEKKSAGWDLPPSRTDGMNAGSVLSNELPSA----VPVAVPVTATTAK 371
Query: 434 P-LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG 492
P L I A NVS+DS+QLTQ+ RPMRRL VENLP+S+SEKALME LNNFLLSSG
Sbjct: 372 PPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSG 431
Query: 493 VQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA 552
+ HV G+ PCI C+I +EKGQA VEFLT EDASAAL DG SFSGSILKI+RPK+FV++
Sbjct: 432 INHVQGTPPCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDFVDM- 490
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH 612
+G EK VA+ D++S IVKDSPHKIFIGGISR LSS M+MEI AFGPLKAY F+VNED
Sbjct: 491 TGVQEKLVAAPDAISDIVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDL 550
Query: 613 EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHAL 672
EPCAF+EYVDQ VT KA AGLNG+K+GGQVLT VQA+ + M+N+GN PF+GIP+HA
Sbjct: 551 GEPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAK 610
Query: 673 PLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNIS 732
PLL++PT+VLKLKNV NP+ SSLSE E+EE+LED+RLEC RFG+VKSVN+VKY +S++S
Sbjct: 611 PLLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVKYNNSHVS 670
Query: 733 TIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGE 792
T++ E +NT G NL D + K E L TD+ SI E E
Sbjct: 671 TLEVYEAADNT-----GSNLGCDGNSMKAETLGGGTDNGSID--------------EVVE 711
Query: 793 VNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAH 852
N++ D++ + + +E + +D++ AV+ S+ + +G+P Q+N +K
Sbjct: 712 RNSISDDKSLTDLIKNELCEPSHIDSNTAVKEPGCPDGSDDIPRGLPDQLNNMKHEVELR 771
Query: 853 DDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM----GMQSSAVENGDN 908
+DK IQ + + + + +E+ N G S E+ G++S D+
Sbjct: 772 NDKAADVIQEDFIIKNKLMTVEEETN--------RKLLGTSAELDSSPGIKSDFTGKNDS 823
Query: 909 ENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
E + +FE GCV VEY R EASCMAAH LH R FDDR+V V Y+ L+LYR +F +
Sbjct: 824 EKGLCDLDDMFEVGCVLVEYGRTEASCMAAHCLHGRYFDDRVVVVGYVALDLYRMKFPR 882
>gi|255575831|ref|XP_002528813.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223531725|gb|EEF33547.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 844
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/824 (48%), Positives = 524/824 (63%), Gaps = 71/824 (8%)
Query: 150 LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEAT 209
+KD KDR + S+ KLK++V ++ KP ++ + I + +S Q + ++E
Sbjct: 86 MKDEYITKSKDREIQDSEVKLKSEVHRDL--KPKGRAGEEIYDRRKSDEQRSNNVKNEDL 143
Query: 210 KKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSERK 269
KKH R LT + RH D S SERE K K+R DEKN+D+ +K DLGKGHD + ++K
Sbjct: 144 KKHPRHLTERVRHEDGSRGVSEREDKSKYRKGVDEKNKDRLPTRKHDLGKGHDSENLDKK 203
Query: 270 EKKESPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLPS-HSTK 328
EK E KS + +LK RRSRSREREDR RRS+S PR++K SY+DREH G PS H K
Sbjct: 204 EKDELSKSHYEEIKLKSRRSRSREREDRKRRSISPLPRSRKHASYHDREH-GEPSLHFLK 262
Query: 329 ISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEK 388
SG+QHSDID +++T NG +GHY+RH GS S LGGYSPRKRR+EAAA+TPSP SPEK
Sbjct: 263 GKSGQQHSDIDRNKITNNGSTGHYKRHGGSASRLGGYSPRKRRSEAAARTPSPTKHSPEK 322
Query: 389 KSAKWDVAP-----VETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
K AKWD+AP + SVP SNQ AS NA VS+ PV S KPL+G+S +
Sbjct: 323 KKAKWDLAPEGADSTFSVSVPPIFKLSNQIASLNARATVSAVPVASIPVKPLSGVSSNIL 382
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
L N ++DSVQLTQ+ RPMRRL VEN+P ASEKA++E LNN L+SSGV H+ G+ PCI
Sbjct: 383 LTNKNDTIDSVQLTQATRPMRRLYVENIPAEASEKAVLERLNNLLISSGVNHIQGTQPCI 442
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
C+I +EKGQA VEFLT EDASAAL DG FSGS +KI+RPK+F
Sbjct: 443 SCIIHKEKGQALVEFLTPEDASAALSFDGSYFSGSTIKIRRPKDF--------------- 487
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVD 623
+MEI FGPLKAYHFE +D PCAF+EY D
Sbjct: 488 ---------------------------IMEIASTFGPLKAYHFENIDDVNGPCAFVEYAD 520
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLK 683
Q VT +A AGLNG+K+GGQV++AVQ + + S ++ G PF+G+P+ A PLL KPT+VLK
Sbjct: 521 QSVTFRACAGLNGMKLGGQVISAVQVIPNASTLEIDGKQPFYGVPEQAKPLLDKPTQVLK 580
Query: 684 LKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENT 743
LKN+F+PE SLS +E+EEVLEDVRLECARFG+VKSVNVV+ G I T +AC+ NE+
Sbjct: 581 LKNLFDPETLPSLSRIEIEEVLEDVRLECARFGTVKSVNVVRNGPIPIFTSEACKMNEDM 640
Query: 744 ASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPAS 803
SAG QNL DETN + E+ H+ ++ N+ +D K V E N V+D++PA
Sbjct: 641 DSAGPQQNLGGDETNAETEKTIGDIHHEPVEAND---TDDDKPV----EGNGVEDDKPAD 693
Query: 804 GTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLE 863
M DE SQL + D++MAVE + D E + +P Q + +S C H KVT ++Q++
Sbjct: 694 DLMEDESSQLGQFDSNMAVENLSGDGVPE-PQEPIPIQQTSKDESDCLH-GKVTDDVQMK 751
Query: 864 HMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFEPGC 923
E+K +++L E+FT N+ ++S A GD+E + + +IF P C
Sbjct: 752 DTIAEHKLPIQQELK--------ESFT---NDHAVESDATGKGDHEEHNCDLSYIFYPSC 800
Query: 924 VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
VFVE+ R EASC+AAH LH RL+D R V V YIPL++YR+RF K
Sbjct: 801 VFVEFGRTEASCIAAHCLHGRLYDGRTVTVGYIPLDVYRSRFPK 844
>gi|449458894|ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213128 [Cucumis sativus]
Length = 910
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 388/1008 (38%), Positives = 538/1008 (53%), Gaps = 139/1008 (13%)
Query: 1 MGRSGRKKEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSN 60
M G K+ + + + ++S++ SAARTRPFSF++IM+RRKTK + ++ DA
Sbjct: 1 MSTHGCSKQYSRRSKKQTRSNSDDESAARTRPFSFEDIMLRRKTKGSAATVEVDATS--- 57
Query: 61 IPGDCTIENVSDDHKSGRHHGHKKSPGVDVHT---SEEYVKVGSGKKEDNALTKN---VD 114
+D+ S R H K +DV EE K S +K++ + KN V
Sbjct: 58 ----------TDNRASERIFRHSKGSSLDVQNLSLEEESAKDSSRRKKEETVLKNNMVVR 107
Query: 115 SSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADV 174
S R L +KLK H R E R ++ G +D + D+
Sbjct: 108 SDRNNYESGLSLMSKLK--------HDRNENDE-----RQKYGQESLGWGKNDQSCRIDI 154
Query: 175 TKETSSKPN----VKSEKLIPSQGRSHNQSIV------DSRDEATKKHSR---DLTGKD- 220
ET+ + + K + S+G S +S D R+ +K+ S+ D KD
Sbjct: 155 ETETAKRHSRDTACKDRRQDHSRGESEKESKRKPQNGEDDRNRDSKRKSQNVDDEINKDG 214
Query: 221 -RHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRH 279
R + + R SKRK +N DD++NRDK AKK D GK HDL+ ERKE S SR+
Sbjct: 215 KRKSQNGDDDKNRVSKRKSQNGDDDRNRDKYIAKKHDHGKHHDLENRERKEAVVSLTSRY 274
Query: 280 GNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDID 339
+SRLKRR+ RS +RE ++RRS+SLSPR+ K ++ R+ E LP S SGR SD +
Sbjct: 275 EDSRLKRRQKRSPDRESKHRRSVSLSPRSHKHSTKLARQKE-LPLESHVKKSGRWRSDSE 333
Query: 340 SSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVE 399
+ N + YRRH GSTSGLGGYSPRKRRTE+A KTPSP+ R+PE+K+ D+ P E
Sbjct: 334 RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPL-RTPEEKNEVLDLPPTE 392
Query: 400 TY-----SVPSNVHTSNQAASSN-AHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDS 453
SV SN SN S +++ +S K L+ +S + K VS+D
Sbjct: 393 KVGLFSGSVASNFPPSNPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMKTKVSLDL 452
Query: 454 VQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQ 513
VQLTQ+ RPMRRL +ENLP SASEKA+++ LN FL+SSGV H+ G+ PCI C+I +++GQ
Sbjct: 453 VQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQ 512
Query: 514 AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDS 573
A VEFLT EDASAAL DG FSGS LKI+RPK+++E
Sbjct: 513 ALVEFLTPEDASAALLFDGSDFSGSTLKIRRPKDYIET---------------------- 550
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAG 633
+ ++V AFG LKAYHFE+N+D PCAF+EYVD+ V KA AG
Sbjct: 551 -----------------LRDVVTAFGRLKAYHFEINDDLNGPCAFLEYVDESVVSKACAG 593
Query: 634 LNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGF 693
LNG+K+GGQVL AV + + +G P +GIP+H PLL++P+ VLK+ NVFN +
Sbjct: 594 LNGMKIGGQVLKVFPAV-PFPLTERTGCQPCYGIPEHVKPLLQRPSVVLKINNVFNADVL 652
Query: 694 SSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLT 753
LSE +++EVLED+R ECARFG+VKSVN VK I A E + + ++T
Sbjct: 653 PVLSESDIDEVLEDIRFECARFGTVKSVNFVK------PCISAEEEYKQIS------DIT 700
Query: 754 NDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEP--S 811
+ + K E E T S +N+LE N + + + + N + N P +G DE
Sbjct: 701 --DVDIKHEIQENSTTVISRNSNDLEDNNANLDNCPS-DSNQKQANCPDNGRHQDEAVED 757
Query: 812 QLCELDTDMAVEYQARDS------TSEIVSQGVPTQVNTLKDSPCAH------DDKVTCN 859
+LC++ A ++ D T ++S+ + N +D+ D K+ C
Sbjct: 758 KLCQMGNTDATCFEVADCENASERTGHVLSEQRSSPENDFQDAKVTEIIETGLDKKLVC- 816
Query: 860 IQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIF 919
E SS D + +NG ASN AVE + ++ D NQ +F
Sbjct: 817 -------VEASSSMMADNEKKSLNGLDPVVRIASN-------AVEKSEKKDPDNNQESLF 862
Query: 920 EPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
G VFVE+ R EASCMAAHSLH R++D + +++EYIP LYR RF K
Sbjct: 863 VLGSVFVEFGRIEASCMAAHSLHGRIYDGQEISIEYIPHGLYRKRFPK 910
>gi|449498643|ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cucumis sativus]
Length = 918
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 389/1016 (38%), Positives = 541/1016 (53%), Gaps = 147/1016 (14%)
Query: 1 MGRSGRKKEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSN 60
M G K+ + + + ++S++ SAARTRPFSF++IM+RRKTK + ++ DA
Sbjct: 1 MSTHGCSKQYSRRSKKQTRSNSDDESAARTRPFSFEDIMLRRKTKGSAATVEVDATS--- 57
Query: 61 IPGDCTIENVSDDHKSGRHHGHKKSPGVDVHT---SEEYVKVGSGKKEDNALTKN---VD 114
+D+ S R H K +DV EE K S +K++ + KN V
Sbjct: 58 ----------TDNRASERIFRHSKGSSLDVQNLSLEEESAKDSSRRKKEETVLKNNMVVR 107
Query: 115 SSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADV 174
S R L +KLK H R E R ++ G +D + D+
Sbjct: 108 SDRNNYESGLSLMSKLK--------HDRNENDE-----RQKYGQESLGWGKNDQSCRIDI 154
Query: 175 TKETSSKPN----VKSEKLIPSQGRSHNQSIV------DSRDEATKKHSRDLT------G 218
ET+ + + K + S+G S +S D R+ +K+ S+++ G
Sbjct: 155 ETETAKRHSRDTACKDRRQDHSRGESEKESKRKPQNGEDDRNRDSKRKSQNVDDEINKDG 214
Query: 219 KDRHADKSGEKSE-------RESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEK 271
D S KS+ R+SKRK +N DD++NRDK AKK D GK HDL+ ERKE
Sbjct: 215 DDDRNRDSKRKSQNGDDDRNRDSKRKSQNGDDDRNRDKYIAKKHDHGKHHDLENRERKEA 274
Query: 272 KESPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISS 331
S SR+ +SRLKRR+ RS +RE ++RRS+SLSPR+ K ++ R+ E LP S S
Sbjct: 275 VVSLTSRYEDSRLKRRQKRSPDRESKHRRSVSLSPRSHKHSTKLARQKE-LPLESHVKKS 333
Query: 332 GRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSA 391
GR SD + + N + YRRH GSTSGLGGYSPRKRRTE+A KTPSP+ R+PE+K+
Sbjct: 334 GRWRSDSERTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPL-RTPEEKNE 392
Query: 392 KWDVAPVETY-----SVPSNVHTSNQAASSN-AHEMVSSDPVTSTTQKPLAGISVSASLA 445
D+ P E SV SN SN S +++ +S K L+ +S +
Sbjct: 393 VLDLPPTEKVGLFSGSVASNFPPSNPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAM 452
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
K VS+D VQLTQ+ RPMRRL +ENLP SASEKA+++ LN FL+SSGV H+ G+ PCI C
Sbjct: 453 KTKVSLDLVQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISC 512
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+I +++GQA VEFLT EDASAAL DG FSGS LKI+RPK+++E
Sbjct: 513 IIHKDRGQALVEFLTPEDASAALLFDGSDFSGSTLKIRRPKDYIET-------------- 558
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQL 625
+ ++V AFG LKAYHFE+N+D PCAF+EYVD+
Sbjct: 559 -------------------------LRDVVTAFGRLKAYHFEINDDLNGPCAFLEYVDES 593
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLK 685
V KA AGLNG+K+GGQVL AV + + +G P +GIP+H PLL++P+ VLK+
Sbjct: 594 VVSKACAGLNGMKIGGQVLKVFPAV-PFPLTERTGCQPCYGIPEHVKPLLQRPSVVLKIN 652
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTAS 745
NVFN + LSE +++EVLED+R ECARFG+VKSVN VK I A E + +
Sbjct: 653 NVFNADVLPVLSESDIDEVLEDIRFECARFGTVKSVNFVK------PCISAEEEYKQIS- 705
Query: 746 AGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGT 805
++T + + K E E T S +N+LE N + + + + N + N P +G
Sbjct: 706 -----DIT--DVDIKHEIQENSTTVISRNSNDLEDNNANLDNCPS-DSNQKQANCPDNGR 757
Query: 806 MGDEP--SQLCELDTDMAVEYQARDS------TSEIVSQGVPTQVNTLKDSPCAH----- 852
DE +LC++ A ++ D T ++S+ + N +D+
Sbjct: 758 HQDEAVEDKLCQMGNTDATCFEVADCENASERTGHVLSEQRSSPENDFQDAKVTEIIETG 817
Query: 853 -DDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQ 911
D K+ C E SS D + +NG ASN AVE + ++
Sbjct: 818 LDKKLVC--------VEASSSMMADNEKKSLNGLDPVVRIASN-------AVEKSEKKDP 862
Query: 912 DPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
D NQ +F G VFVE+ R EASCMAAHSLH R++D + +++EYIP LYR RF K
Sbjct: 863 DNNQESLFVLGSVFVEFGRIEASCMAAHSLHGRIYDGQEISIEYIPHGLYRKRFPK 918
>gi|356536627|ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810537 [Glycine max]
Length = 735
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 453/777 (58%), Gaps = 78/777 (10%)
Query: 203 DSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
DS + KKH R+ + KD+HA K ERE+KRK++N DDE +D++ ++K D K H+
Sbjct: 25 DSEEVPEKKHYRE-SDKDKHAGGRA-KYERETKRKYKNGDDE-TQDRNTSRKQDAVKHHN 81
Query: 263 LKVSERKEKKESPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGL 322
+ + ERKE++ KS N L +R SR RE +RRS S SPR QKRT Y D E + L
Sbjct: 82 MHIYERKERRVKVKSH--NEELTAKRRCSRSREREDRRSPSFSPREQKRT-YQDGERKEL 138
Query: 323 PSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPI 382
HS K SS ++ DID +RV+ NG SGH+ RH STSGLGGYSPRKR++EAAAKTPSP
Sbjct: 139 SMHSLKDSSRTKNPDIDRNRVSTNGSSGHHHRHGVSTSGLGGYSPRKRKSEAAAKTPSPS 198
Query: 383 NRSPEKKSAKWDVAPVETYS----VPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
S EKK A WD+ P T + V S+ SN A SN H++VS+ + KPL
Sbjct: 199 KHSLEKKRAGWDLPPAGTNNPSAVVSSSFPVSNCAVLSNMHDVVSTSSLDLALVKPLPVS 258
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
S N ++DSVQLTQ+ RP+RRL +ENLP SASEKA+M+ NN LLS+ V H+
Sbjct: 259 FPSDVSTGKNTNIDSVQLTQATRPIRRLYLENLPASASEKAVMDCFNNLLLSARVNHIQQ 318
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK 558
+ PCI C++ ++KGQA VEFLTA+DASAAL DG GSI+KI+RPK+++E+
Sbjct: 319 AQPCICCILHKDKGQALVEFLTADDASAALSFDGSMLFGSIVKIRRPKDYIEL------- 371
Query: 559 SVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAF 618
MEI FG LKAYHFE ++ PCAF
Sbjct: 372 ---------------------------------MEIAGVFGSLKAYHFETKVNNG-PCAF 397
Query: 619 IEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP 678
+EYVD VT KA AGLNG+K+GG+VLT +QA+ D S ++N+G +G+P+HA PLL+KP
Sbjct: 398 LEYVDHSVTIKACAGLNGMKLGGEVLTVLQAMPDASPLENAGESLSYGVPEHAKPLLRKP 457
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY--GDSNISTIQA 736
T+VL++ NVF + SLS++ +EE+L+DVRLECARFG++KS+NVVK+ G++ + ++
Sbjct: 458 TQVLEINNVFAADTILSLSDMAIEEILDDVRLECARFGTIKSINVVKHSSGENLATKLEE 517
Query: 737 CEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIK-NNELEIL-NDSKEVMEAGEVN 794
C+ + V Q+ TN TN + + + N +EI N+ E ++ E +
Sbjct: 518 CKVINKVDAKEVSQD-TNCITNNTESSFSDKATYPDFEGTNGMEIHDNNEMEEVKVDEGS 576
Query: 795 NVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDD 854
V ++ A + D S +D D AVE + Q P Q +T D P +D
Sbjct: 577 CVYVDKNAE--VFDYKSCREHVD-DSAVEDVGDKGIPCSIIQECPDQQDTPNDGPEFYDK 633
Query: 855 KVTCNIQLEHMSEENKSSAKEDLNLE---EVNGNSEAFTGASNEMGMQSSAVENGDN-EN 910
V +I D+N+E E AF +E + + V + +
Sbjct: 634 MVANDI---------------DVNIENNMESKDTVCAFQEGFSEWDISAELVSPQKSIDT 678
Query: 911 QDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
++ GH+F+PG V VEY RAEA C AAHSLH R FD RIV V Y+ L+LYR+RF+K
Sbjct: 679 EEDIYGHVFKPGSVLVEYGRAEACCSAAHSLHGRFFDGRIVTVGYVALSLYRSRFTK 735
>gi|218192051|gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
Length = 1128
Score = 461 bits (1186), Expect = e-126, Method: Compositional matrix adjust.
Identities = 369/999 (36%), Positives = 522/999 (52%), Gaps = 102/999 (10%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSE--NIKEDAMDVSNIPGDCTIENVSDDHKSGRH 79
+++G+AARTRP S +IM RR+ K SE KE + SN S+ +SGR
Sbjct: 179 TSDGTAARTRPLSIQDIMSRREKKTASEAKKTKEGLEENSN--------GKSNHLESGRG 230
Query: 80 HGHKKSP---GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKL-KEDYV 135
+K ++ + K G G K+D ++ +R RD++ ++ K+D +
Sbjct: 231 SKSRKDVREMPLEGSKKDNSDKPGEGSKKDE--MRHTPREERRKDNMRDMQREVSKKDNL 288
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-----SKPNVKSEKLI 190
+ +++K + P + R ++ + T++ S K N S KL
Sbjct: 289 KDRPKDISKIDNLKVKVKVPSKDDQRDAPKKSSRKERSSTRDDSHLVDKDKGNHNSHKLS 348
Query: 191 P------SQGRSHNQSIVDSRD-EATKKHSRDLTGKDR-----HADKSGEKSER--ESKR 236
+ R N + +RD +AT + S+ GK D+ E+SER + KR
Sbjct: 349 TYTSGQVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSERRTDGKR 408
Query: 237 KHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRSRSRE 293
K R DDEK+ D+ KK D + D + +RK+ +KE+ K H R KRRRS SR+
Sbjct: 409 KSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKRRRSTSRD 468
Query: 294 R-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNG--LSG 350
++R+ RS+S S R Q R SY H+ P + + S R+H + D R + N SG
Sbjct: 469 HYQERHDRSVSPSSREQ-RHSYRGHGHDYYPPYHSMDKSRRKHFETDRHRTSWNDGYSSG 527
Query: 351 HYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPS 405
YRR++ S LGGYSPRKR+T + KT S + RSPEKKSA WD PV T S
Sbjct: 528 SYRRYE---SRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATDL--S 582
Query: 406 NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
N T+ Q+ V PV TT K ++ L N+++DSVQLTQ+ RP+RR
Sbjct: 583 NFVTTLQSTVGLKDSTV---PVNFTTSKQDPNTTIGTILTGSNLAVDSVQLTQATRPLRR 639
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDA 524
L +ENLP A+E L+ LN FLLSS H+ S PC+ CVI ++K QAFVEFLT EDA
Sbjct: 640 LHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTPEDA 699
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
+AAL DG SF GS LKI+RPKE+VE+A +K + +S +V DSPHKIFI GIS
Sbjct: 700 TAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKKPSEEIKLISDVVADSPHKIFIAGISG 759
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+SS+M+MEIV +FGPL AY F NED CAF+EY+D +T KA AGLNG+K+GG +L
Sbjct: 760 VISSEMLMEIVSSFGPLAAYRFLFNEDLGGACAFLEYIDHSITSKACAGLNGMKLGGGIL 819
Query: 645 TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEV 704
TAV + + + PF+GIP A LL++PT+VL+LKNVF+ E + LS+ E+EE+
Sbjct: 820 TAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLKNVFDQEEYLLLSKSELEEI 879
Query: 705 LEDVRLECARFGSVKSVNVVKYGDSNIS----TIQACE------------GNENTASAGV 748
LEDVR+ECARFG+VKS+NVV+Y S+ + TI CE GN + GV
Sbjct: 880 LEDVRVECARFGAVKSINVVEYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGV 939
Query: 749 GQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGD 808
++ N T+ + EV D + + + D K + GE + + T GD
Sbjct: 940 ECSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECD--------APTAGD 991
Query: 809 EPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEE 868
E +TD VE DST Q + H D +++ +
Sbjct: 992 E-------NTDQGVEADQTDSTD--------AQDDARGTIERGHADADQASLETSCSTAP 1036
Query: 869 NKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFEPGCVFVEY 928
+ K E+ G G S ++ AV+ DN + E GC+ VE+
Sbjct: 1037 GDGADKSGRENEQQGG-----AGVSESNTEKAPAVDARDNALA--SNTSALEAGCILVEF 1089
Query: 929 MRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
+R EA+C AAHSLH R F RIV+ Y P +LY ++++
Sbjct: 1090 LRKEAACTAAHSLHGRRFGSRIVSAGYAPHDLYLQKYTR 1128
>gi|147852616|emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]
Length = 544
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 298/565 (52%), Positives = 366/565 (64%), Gaps = 50/565 (8%)
Query: 1 MGRSGRKKEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSN 60
M RS R KEK+GK E L + EG+AARTRPFSFDEIM+RRK K L ++K+ A + N
Sbjct: 1 MSRSNRPKEKYGKSTELYLDNFKEGTAARTRPFSFDEIMLRRKNKKLYGDVKDGAGEEGN 60
Query: 61 IPGDCTIENVSDDHKS--GRHHGHKKSPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQ 118
I ++NVSD ++S G H PG H+SE++VKV S KK++N K + +
Sbjct: 61 ISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGKV 120
Query: 119 RDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKET 178
+D E+ + E KLK AK N K D +KE
Sbjct: 121 KDKESHNSEDKLK----AKPN-----------------------------KGMTDKSKEG 147
Query: 179 SSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKH 238
V K I + R + S E KK SRD GKDR+AD+S KSE+ESKRKH
Sbjct: 148 KINQRVHGRKKIDERSRRSSDD---SESEPEKKFSRDSVGKDRYADRS-RKSEKESKRKH 203
Query: 239 RNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRHGNSRLKRRRSRSRERE-DR 297
R +DEKNR++++ KK D GK H+ + +RKE++ESP SR+ SR KRRRSRSRER+ DR
Sbjct: 204 RTGEDEKNRERNSMKKHDPGKRHESEFLDRKERRESPPSRYEESRPKRRRSRSRERDKDR 263
Query: 298 NRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDG 357
++RS SLSPRAQKRTS++ REH L SHS K SGRQHSD D +R++ NG S H+RRH G
Sbjct: 264 DKRSSSLSPRAQKRTSHHGREHAELSSHSLKDRSGRQHSDADRNRISNNGSSSHFRRHGG 323
Query: 358 STSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVET-----YSVPSNVHTSNQ 412
S SGLGGYSPRKRRTEAA KTPSP NRSPEKK+A WD+ P T SV S++
Sbjct: 324 SASGLGGYSPRKRRTEAAIKTPSPTNRSPEKKNAGWDLPPSRTDGMNAGSVLSSLQVLKP 383
Query: 413 AASSNAHEMVS----SDPVTSTTQK-PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLC 467
SSNA E+ S + PVT+TT K PL I A NVS+DS+QLTQ+ RPMRRL
Sbjct: 384 TVSSNADELPSAVPVAVPVTATTAKPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLY 443
Query: 468 VENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAA 527
VENLP+S+SEKALME LNNFLLSSG+ HV G+ PCI C+I +EKGQA VEFLT EDASAA
Sbjct: 444 VENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQALVEFLTPEDASAA 503
Query: 528 LCCDGCSFSGSILKIKRPKEFVEVA 552
L DG SFSGSILKI+RPK+FV++
Sbjct: 504 LSFDGISFSGSILKIRRPKDFVDMV 528
>gi|108706080|gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 369/999 (36%), Positives = 520/999 (52%), Gaps = 102/999 (10%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSE--NIKEDAMDVSNIPGDCTIENVSDDHKSGRH 79
+++G+AARTRP S +IM RR+ K SE KE + SN S+ +SGR
Sbjct: 15 TSDGTAARTRPLSIQDIMSRREKKTASEAKKTKEGLEENSN--------GKSNHLESGRG 66
Query: 80 HGHKKSP---GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKL-KEDYV 135
+K ++ + K G G K+D ++ +R RD++ ++ K+D +
Sbjct: 67 SKSRKDVREMPLEGSKKDNSDKPGEGSKKDE--MRHTPREERRKDNMRDMQREVSKKDNL 124
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-----SKPNVKSEKLI 190
+ +++K + P + R +K + T++ S K N S KL
Sbjct: 125 KDRPKDISKIDNLKVKVKVPSKDDQRDAPKKSSKKERSSTRDDSHLVDKDKGNHNSHKLS 184
Query: 191 P------SQGRSHNQSIVDSRD-EATKKHSRDLTGKDR-----HADKSGEKSER--ESKR 236
+ R N + +RD +AT + S+ GK D+ E+SER + KR
Sbjct: 185 TYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSERRTDGKR 244
Query: 237 KHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRSRSRE 293
R DDEK+ D+ KK D + D + +RK+ +KE+ K H R KRRRS SR+
Sbjct: 245 NSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKRRRSTSRD 304
Query: 294 R-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNG--LSG 350
++R+ RS+S S R Q R SY H+ P + + S R+H + D R + N SG
Sbjct: 305 HYQERHDRSVSPSSREQ-RHSYRGHGHDYYPPYHSMDKSRRKHFETDRHRTSWNDGYSSG 363
Query: 351 HYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPS 405
YRR++ S LGGYSPRKR+T + KT S + RSPEKKSA WD PV T S
Sbjct: 364 SYRRYE---SRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATDL--S 418
Query: 406 NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
N T+ Q+ V PV TT K ++ L N+++DSVQLTQ+ RP+RR
Sbjct: 419 NFVTTLQSTVGLKDSTV---PVNFTTSKQDPNTTIGTILTGSNLAVDSVQLTQATRPLRR 475
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDA 524
L +ENLP A+E L+ LN FLLSS H+ S PC+ CVI ++K QAFVEFLT EDA
Sbjct: 476 LHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTPEDA 535
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
+AAL DG SF GS LKI+RPKE+VE+A +K + +S +V DSPHKIFI GIS
Sbjct: 536 TAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKKPSEEIKLISDVVADSPHKIFIAGISG 595
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+SS+M+MEIV +FGPL AY F NE CAF+EY+D +T KA AGLNG+K+GG +L
Sbjct: 596 VISSEMLMEIVSSFGPLAAYRFLFNEYLGGACAFLEYIDHSITSKACAGLNGMKLGGGIL 655
Query: 645 TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEV 704
TAV + + + PF+GIP A LL++PT+VL+LKNVF+ E + LS+ E+EE+
Sbjct: 656 TAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLKNVFDQEEYLLLSKSELEEI 715
Query: 705 LEDVRLECARFGSVKSVNVVKYGDSNIS----TIQACE------------GNENTASAGV 748
LEDVR+ECARFG+VKS+NVVKY S+ + TI CE GN + GV
Sbjct: 716 LEDVRVECARFGAVKSINVVKYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGV 775
Query: 749 GQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGD 808
++ N T+ + EV D + + + D K + GE + + T GD
Sbjct: 776 ECSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECD--------APTAGD 827
Query: 809 EPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEE 868
E +TD VE DST Q + H D +++ +
Sbjct: 828 E-------NTDQGVEADQTDSTD--------AQDDARGTIERGHADADPASLETSCSTAP 872
Query: 869 NKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFEPGCVFVEY 928
+ K E+ G G S ++ AV+ DN + E GC+ VE+
Sbjct: 873 GDGADKSGRENEQQGG-----AGVSESNTEKAPAVDARDNALA--SNTSALEAGCILVEF 925
Query: 929 MRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
+R EA+C+AAHSLH R F RIV+ Y P +LY ++ +
Sbjct: 926 LRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964
>gi|108706079|gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 367/999 (36%), Positives = 518/999 (51%), Gaps = 102/999 (10%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSE--NIKEDAMDVSNIPGDCTIENVSDDHKSGRH 79
+++G+AARTRP S +IM RR+ K SE KE + SN S+ +SGR
Sbjct: 15 TSDGTAARTRPLSIQDIMSRREKKTASEAKKTKEGLEENSN--------GKSNHLESGRG 66
Query: 80 HGHKKSP---GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKL-KEDYV 135
+K ++ + K G G K+D ++ +R RD++ ++ K+D +
Sbjct: 67 SKSRKDVREMPLEGSKKDNSDKPGEGSKKDE--MRHTPREERRKDNMRDMQREVSKKDNL 124
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-----SKPNVKSEKLI 190
+ +++K + P + R +K + T++ S K N S KL
Sbjct: 125 KDRPKDISKIDNLKVKVKVPSKDDQRDAPKKSSKKERSSTRDDSHLVDKDKGNHNSHKLS 184
Query: 191 P------SQGRSHNQSIVDSRD-EATKKHSRDLTGKDR-----HADKSGEKSER--ESKR 236
+ R N + +RD +AT + S+ GK D+ E+SER + KR
Sbjct: 185 TYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSERRTDGKR 244
Query: 237 KHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRSRSRE 293
R DDEK+ D+ KK D + D + +RK+ +KE+ K H R KRRRS SR+
Sbjct: 245 NSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKRRRSTSRD 304
Query: 294 R-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNG--LSG 350
++R+ RS+S S R Q R SY H+ P + + S R+H + D R + N SG
Sbjct: 305 HYQERHDRSVSPSSREQ-RHSYRGHGHDYYPPYHSMDKSRRKHFETDRHRTSWNDGYSSG 363
Query: 351 HYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPS 405
YRR++ S LGGYSPRKR+T + KT S + RSPEKKSA WD PV T S
Sbjct: 364 SYRRYE---SRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATDL--S 418
Query: 406 NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
N T+ Q+ V PV TT K ++ L N+++DSVQLTQ+ RP+RR
Sbjct: 419 NFVTTLQSTVGLKDSTV---PVNFTTSKQDPNTTIGTILTGSNLAVDSVQLTQATRPLRR 475
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDA 524
L +ENLP A+E L+ LN FLLSS H+ S PC+ CVI ++K QAFVEFLT EDA
Sbjct: 476 LHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTPEDA 535
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
+AAL DG SF GS LKI+RPKE+VE+A +K + +S +V DSPHKIFI GIS
Sbjct: 536 TAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKKPSEEIKLISDVVADSPHKIFIAGISG 595
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+SS+M+MEIV +FGPL AY F NE CAF+EY+D +T KA AGLNG+K+GG +L
Sbjct: 596 VISSEMLMEIVSSFGPLAAYRFLFNEYLGGACAFLEYIDHSITSKACAGLNGMKLGGGIL 655
Query: 645 TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEV 704
TAV + + + PF+GIP A LL++PT+VL+LKNVF+ E + LS+ E+EE+
Sbjct: 656 TAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLKNVFDQEEYLLLSKSELEEI 715
Query: 705 LEDVRLECARFGSVKSVNVVKYGDSNIS----TIQACE------------GNENTASAGV 748
LEDVR+E RFG+VKS+NVVKY S+ + TI CE GN + GV
Sbjct: 716 LEDVRVEYDRFGAVKSINVVKYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGV 775
Query: 749 GQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGD 808
++ N T+ + EV D + + + D K + GE + + T GD
Sbjct: 776 ECSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECD--------APTAGD 827
Query: 809 EPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEE 868
E +TD VE DST Q + H D +++ +
Sbjct: 828 E-------NTDQGVEADQTDSTD--------AQDDARGTIERGHADADPASLETSCSTAP 872
Query: 869 NKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFEPGCVFVEY 928
+ K E+ G G S ++ AV+ DN + E GC+ VE+
Sbjct: 873 GDGADKSGRENEQQGG-----AGVSESNTEKAPAVDARDNALA--SNTSALEAGCILVEF 925
Query: 929 MRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
+R EA+C+AAHSLH R F RIV+ Y P +LY ++ +
Sbjct: 926 LRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964
>gi|242037001|ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
gi|241919749|gb|EER92893.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
Length = 969
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 362/1018 (35%), Positives = 518/1018 (50%), Gaps = 135/1018 (13%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVSDDHKSGRHHG 81
++EG+AARTRP S +IM+RR+ K SE+ K+ + N G T +HKS +
Sbjct: 15 TSEGTAARTRPLSIKDIMLRREKKAASES-KKAKEGLENGKGKSTHLEQGREHKSRKDAR 73
Query: 82 HKKSPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHR 141
G S + + GS K++ + + E KED
Sbjct: 74 DMPVEGSRKEKSRDATREGSKKEKPRHIPR---------------ENPKKED-------T 111
Query: 142 RTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSK-----PNVKSEKLIPS---- 192
R E+ KD N +DR N G+ D K + P S+K PS
Sbjct: 112 RYAPKEVSKKD----NSRDRPNTGAKMDDLKDAPKVPEKEGLGDAPKKASKKQRPSGDDN 167
Query: 193 ------QGRSHNQSIV--------DSRD--------------------EATKKHSRDLTG 218
+ H+Q +V +S+D E K+ + + G
Sbjct: 168 HSVRKDKDIHHSQKLVTNMSGRADESKDRNLSEIRERKGDVMRSEYQKEPGKRWNDEAVG 227
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESP 275
D+ KS EK E+KRK R+ D+E++ D+ +KK D D K S+R + E
Sbjct: 228 DDKIKFKS-EKLRNETKRKDRSFDNERSPEVDRPMSKKQDSAWFQDSKHSDRYAGRNEYA 286
Query: 276 KSRHGNSRLKRRRSRSRERE-DRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQ 334
K HG KRRRSRSR+ + +R RS+S P ++R +Y R+ P H + S R+
Sbjct: 287 KPYHGEPGFKRRRSRSRDHDRERYGRSIS-PPLREERYNYRGRDFGNYPPHYSMEKSRRK 345
Query: 335 HSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKK 389
++++D +++G+G H S LGGYSPRK++T +A KTPS + +SPEKK
Sbjct: 346 YAEVDKQKLSGSGGYIG-GSHQKYESRLGGYSPRKKKTSLQAEQATTKTPSKVIQSPEKK 404
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
SA WD PV+ SN T+ ++ P + +T K +V L ++
Sbjct: 405 SATWDQPPVKANQ--SNFPTTFLPTVGQ----MAPIPFSFSTIKKDPSTTVETMLVGNSL 458
Query: 450 SMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQR 509
+ DSVQLTQ+ RP+RRL +ENLP SA+E L++ LN+FLL +G++ S PC+ C I R
Sbjct: 459 TADSVQLTQATRPLRRLHIENLPDSATEDKLIDCLNDFLLPTGIK-PQRSKPCLSCTINR 517
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI 569
EK QAFVEFLT EDA+AAL DG S +GS L+I+RPKE+VE + +K +S +
Sbjct: 518 EKRQAFVEFLTPEDATAALSFDGRSLNGSTLRIRRPKEYVETVNVTPKKPAEETALISDV 577
Query: 570 VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPK 629
V DSPHKIFI GI+ +SS+M+MEIV AFGPL AY F N + PCAF+EY D+ +T K
Sbjct: 578 VADSPHKIFIAGIAGVISSEMLMEIVSAFGPLAAYRFLFNSELGGPCAFLEYADRSITSK 637
Query: 630 AIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFN 689
A AGLNG+ +GG VLTAV + + + PF+GIP++A LLK+PT+VL+LKN F
Sbjct: 638 ACAGLNGMMLGGCVLTAVHVFPNPPVEAANEASPFYGIPENAKSLLKEPTKVLQLKNTFE 697
Query: 690 PEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGVG 749
E + LS+ E+EE LEDVR+EC RFG+VKSV+VV+Y S + +NT +
Sbjct: 698 REEYMLLSKSELEETLEDVRVECTRFGAVKSVHVVEYPAGGGSAAE-----DNTVELKIE 752
Query: 750 QNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDE 809
D N + V+++ N +++LN S EA E +V D P S D+
Sbjct: 753 CTEFADTEN----IAKAVSEYSVPINQSIDVLNHS----EASETKDV-DPIPESQDHKDK 803
Query: 810 --PSQ--LCELDTDMAVEYQARDSTSEIVSQGVPT-QVNTLKDSPCAHDD-------KVT 857
PS LCE +A E D T + +PT Q + + A D+ +VT
Sbjct: 804 HLPSNAALCECKAPVADEDAELDETQSRAA--LPTSQHAEVGHTEAAVDENKHTGAGEVT 861
Query: 858 CNIQLEHMSEENKS--------SAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNE 909
+ + E++ S E + E G+++ T E + AVE D
Sbjct: 862 ATVMDDDAVEKSHQDPRTSETCSPAEPTDKVEKPGSADDVTENRPE---KVPAVETSDT- 917
Query: 910 NQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
G +FEPG V VE+MR EA+C+AAHSLH R F +R V Y P +LY ++ +
Sbjct: 918 ------GFVFEPGSVLVEFMRKEAACIAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 969
>gi|125584846|gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japonica Group]
Length = 942
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 352/1007 (34%), Positives = 500/1007 (49%), Gaps = 140/1007 (13%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSE--NIKEDAMDVSNIPGDCTIENVSDDHKSGRH 79
+++G+AARTRP S +IM RR+ K SE KE + SN S+ +SGR
Sbjct: 15 TSDGTAARTRPLSIQDIMSRREKKTASEAKKTKEGLEENSN--------GKSNHLESGRG 66
Query: 80 HGHKKSP---GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKL-KEDYV 135
+K ++ + K G G K+D ++ +R RD++ ++ K+D +
Sbjct: 67 SKSRKDVREMPLEGSKKDNSDKPGEGSKKDE--MRHTPREERRKDNMRDMQREVSKKDNL 124
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-----SKPNVKSEKLI 190
+ +++K + P + R +K + T++ S K N S KL
Sbjct: 125 KDRPKDISKIDNLKVKVKVPSKDDQRDAPKKSSKKERSSTRDDSHLVDKDKGNHNSHKLS 184
Query: 191 P------SQGRSHNQSIVDSRD-EATKKHSRDLTGKDR-----HADKSGEKSER--ESKR 236
+ R N + +RD +AT + S+ GK D+ E+SER + KR
Sbjct: 185 TYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSERRTDGKR 244
Query: 237 KHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRSRSRE 293
R DDEK+ D+ KK D + D + +RK+ +KE+ K H R KRRRS SR+
Sbjct: 245 NSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKRRRSTSRD 304
Query: 294 R-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNG--LSG 350
++R+ RS+S S R Q R SY H+ P + + S R+H + D R + N SG
Sbjct: 305 HYQERHDRSVSPSSREQ-RHSYRGHGHDYYPPYHSMDKSRRKHFETDRHRTSWNDGYSSG 363
Query: 351 HYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPS 405
YRR++ S LGGYSPRKR+T + KT S + RSPEKKSA WD PV T S
Sbjct: 364 SYRRYE---SRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATDL--S 418
Query: 406 NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
N T+ Q+ V PV TT K ++ L N+++DSVQLTQ+ RP+RR
Sbjct: 419 NFVTTLQSTVGLKDSTV---PVNFTTSKQDPNTTIGTILTGSNLAVDSVQLTQATRPLRR 475
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDA 524
L +ENLP A+E L+ LN FLLSS H+ S PC+ CVI ++K QAFVEFLT EDA
Sbjct: 476 LHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTPEDA 535
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
+AAL DG SF GS LKI+RPKE+VE+A +K + +S +V DSPHKIFI GIS
Sbjct: 536 TAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKKPSEEIKLISDVVADSPHKIFIAGISG 595
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+SS+M Y+D +T KA AGLNG+K+GG +L
Sbjct: 596 VISSEM------------------------------YIDHPITSKACAGLNGMKLGGGIL 625
Query: 645 TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEV 704
TAV + + + PF+GIP A LL++PT+VL+LKNVF+ E + LS+ E+EE+
Sbjct: 626 TAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLKNVFDQEEYLLLSKSELEEI 685
Query: 705 LEDVRLECA--------RFGSVKSVNVVKYGDSNIS----TIQACE------------GN 740
LEDVR+ECA RFG+VKS+NVVKY S+ + TI CE GN
Sbjct: 686 LEDVRVECASLHYGQDDRFGAVKSINVVKYPASSDNTTGDTITECEDGSTKIEPKEYGGN 745
Query: 741 ENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNR 800
+ GV ++ N T+ + EV D + + + D K + GE +
Sbjct: 746 VSCTETGVECSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECD------ 799
Query: 801 PASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNI 860
+ T GDE +TD VE DST Q + H D ++
Sbjct: 800 --APTAGDE-------NTDQGVEADQTDSTD--------AQDDARGTIERGHADADPASL 842
Query: 861 QLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFE 920
+ + + K E+ G G S ++ AV+ DN + E
Sbjct: 843 ETSCSTAPGDGADKSGRENEQQGG-----AGVSESNTEKAPAVDARDNALA--SNTSALE 895
Query: 921 PGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
GC+ VE++R EA+C+AAHSLH R F RIV+ Y P +LY ++ +
Sbjct: 896 AGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 942
>gi|413956976|gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 635
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 261/635 (41%), Positives = 356/635 (56%), Gaps = 48/635 (7%)
Query: 355 HDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVET--YSVPSN- 406
H S LGGYSPRK++T +A KTPS + +SPEKKSA WD PV+ + P+
Sbjct: 27 HQRYESRLGGYSPRKKKTSLQAEQATTKTPSKVIQSPEKKSATWDQPPVKANQSNFPTTF 86
Query: 407 VHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRL 466
+ T Q A + V DP T+ LAG S++A DSVQLTQ+ RP+RRL
Sbjct: 87 LPTVGQMAPTPFSFSVIKDPSTTAVTM-LAGNSLTA---------DSVQLTQATRPLRRL 136
Query: 467 CVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASA 526
+ENLP SA+E L++ LN+FLLS+G + + S PC+ C I REK QAFVEFLT EDA+A
Sbjct: 137 HIENLPDSATEDKLIDCLNDFLLSTGSK-LQRSKPCLSCTINREKRQAFVEFLTPEDATA 195
Query: 527 ALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTL 586
A+ DG S +GS+L+I+RPKE+VE + +K+ + +S +V DSP+KIFI GI+ +
Sbjct: 196 AISFDGRSLNGSVLRIRRPKEYVETVNVTPKKAEETA-LISDVVADSPYKIFIAGIAGVI 254
Query: 587 SSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTA 646
SSKM+MEIV AFGPL AY F N + PCAF+EY D+ VT KA AGLNG+ +GG+VLTA
Sbjct: 255 SSKMLMEIVSAFGPLAAYRFLFNNELGGPCAFLEYADRSVTSKACAGLNGMMLGGRVLTA 314
Query: 647 VQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLE 706
V + + + PF+GIP +A LLK+PT+VL+LKNVF E + LS+ E+EE LE
Sbjct: 315 VHVFPNPHVEAANEASPFYGIPDNAKLLLKEPTKVLQLKNVFEREEYMLLSKSELEETLE 374
Query: 707 DVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGV-GQNLTNDETNEKGERLE 765
DVR+EC RFG+VKSVNVV+Y + +S + EN + ++ E K
Sbjct: 375 DVRVECTRFGAVKSVNVVEYPAAGVSAAE-----ENIVELKIECTEFSDTENIAKAVSEY 429
Query: 766 EVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQ 825
V SI + +D+K+V E + KD S + LCE + +A E
Sbjct: 430 SVPIIPSIDVLNHSVASDTKDVDLIPESQDQKDKHLPSN------AALCESEAPVADEDA 483
Query: 826 ARDSTSEIVSQGVPTQVNTLKDSPCAHDD--------KVTCNIQLEHMSEENKSSAK--E 875
D T +PT + D A D KVT + E++ + E
Sbjct: 484 ELDETQS--RAALPTPQHAEADHTEAAVDENKHTGAGKVTATATDDDAVEKSHGDPRTSE 541
Query: 876 DLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQ---DPNQGHIFEPGCVFVEYMRAE 932
N +E G +E G + + E Q + G +FEPG V VE++R E
Sbjct: 542 TCNPAGPTDKAEK-PGRYSEQGAGDVTEDRPEKEAQAVGTSDTGFVFEPGSVLVEFLREE 600
Query: 933 ASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
A+CMAAHSLH R F +R V Y P +LY ++ +
Sbjct: 601 AACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 635
>gi|357114131|ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
distachyon]
Length = 840
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/611 (43%), Positives = 365/611 (59%), Gaps = 45/611 (7%)
Query: 142 RTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSI 201
+ LKS IR +S G KD GS K ++S + E + GR+ ++
Sbjct: 25 KKLKSTIRNDSQSAG--KDEVTHGSQ--------KTSTSMRGLADESKDANHGRTRARNA 74
Query: 202 VDSRDEATKKHSRDLTGKDRHADKSGEKSER---ESKRKHRNRDDE----KNRDKSAAKK 254
E+ K + G+ D+ EKSE+ E+KRK DD+ ++ D+ KK
Sbjct: 75 HTIGYESLKGPGKRWNGETVDNDRIKEKSEKPRNETKRKFHGFDDQIEKSQDLDRPVLKK 134
Query: 255 VDLGKGHDLKVSERKE-KKESPKSRHGN-SRLKRRRSRSREREDRNRRSLSLSPRAQKRT 312
D + D + S+R + +KE K +RR +R RS+SLSPR Q+R
Sbjct: 135 HDFARFRDSRHSDRNDGRKEYGKPYDEEPRSKRRRSRSRDHDRERRDRSVSLSPREQRR- 193
Query: 313 SYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGL--SGHYRRHDGSTSGLGGYSPRKR 370
SY +H+ P GR++++ D R +GNG G YRR++ S LGGYSPRKR
Sbjct: 194 SYRGHDHDNYPP-------GRKYAETDRFRTSGNGGHNDGSYRRYE---SRLGGYSPRKR 243
Query: 371 RT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
+T + AKT P+ RSPE+KSA WD P + SN TS Q S +M SS
Sbjct: 244 KTAPQDEQMTAKTSFPVVRSPERKSATWDQGPAKADQ--SNFFTSLQPIVS---QMTSSV 298
Query: 426 PVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLN 485
V+S+ K + ++ L+ + S+DSVQLTQ+ RP+RRL +ENLP SASE L+ LN
Sbjct: 299 SVSSSAPKQNSATTLETILSGNSSSIDSVQLTQATRPLRRLHIENLPSSASEDMLIGCLN 358
Query: 486 NFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKR 544
+F LSS V H+ S PC+ C I +EK QAFVEFLT EDA+AAL DG SF+GS LKI+R
Sbjct: 359 DFFLSSDVNHIQKSKQPCLSCTINKEKHQAFVEFLTPEDATAALSFDGRSFNGSALKIRR 418
Query: 545 PKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
PKE++E+A+ +K+V + S V DSPHKIF+ GIS +SS+M+MEIV +FG L AY
Sbjct: 419 PKEYIEMANVVPKKTVEEIKLASD-VADSPHKIFVAGISGVISSEMLMEIVSSFGQLAAY 477
Query: 605 HFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
F+ +E CAF+EY+D +T KA AGLNG+K+GG +LTAVQ V + + PF
Sbjct: 478 RFQDHEALSGRCAFLEYIDHSITDKACAGLNGMKLGGCILTAVQ-VFPNPLEACNEASPF 536
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
+ IP A LL+ PTEVL+LKNVF+ E + LS+ E+EE++ED+R+ECARFG+VKS+N+V
Sbjct: 537 YSIPDSAKMLLEAPTEVLQLKNVFDREEYLLLSKSELEEIMEDIRMECARFGAVKSINIV 596
Query: 725 KYGDSNISTIQ 735
+Y S+ ST+Q
Sbjct: 597 EYPASSDSTLQ 607
>gi|224110608|ref|XP_002315576.1| predicted protein [Populus trichocarpa]
gi|222864616|gb|EEF01747.1| predicted protein [Populus trichocarpa]
Length = 500
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 260/513 (50%), Positives = 327/513 (63%), Gaps = 52/513 (10%)
Query: 1 MGRSGRKKEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSN 60
M RS R K+K+G+ E S EG+AARTRPFSFDEIM RK K SE ++ + D
Sbjct: 2 MSRSSRHKDKYGRSSEMSQDHQYEGTAARTRPFSFDEIMSIRKNKKASEILEGELKD--- 58
Query: 61 IPGDCTIENVSDDHKSGRHHGHKK--SPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQ 118
I G E SD H+S R +GH + S G+ H SEE+ K KKEDN
Sbjct: 59 ILGGVINEKASD-HRSERGNGHNEESSTGLRQHLSEEHGKASYRKKEDN----------- 106
Query: 119 RDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKET 178
+KEDY+AK +DR R S+TK KA + ++
Sbjct: 107 ---------VSMKEDYIAKG--------------------RDRDVRDSETKSKAKMNEDM 137
Query: 179 SSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKH 238
++ K+ + I + + + S EA KKHSR++ KDRH DKS KSERE K K+
Sbjct: 138 RTEVKEKTNEKIHDRRKGDKRPSNISESEAVKKHSREVQ-KDRHVDKSRGKSERERKEKY 196
Query: 239 RNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRHGNSRLKRRRSRSREREDRN 298
RN D+K+RD++AAKK DLGKGH L+ SERKE+KES KS H RLKRRRSRSRE EDRN
Sbjct: 197 RNGIDDKSRDRNAAKKHDLGKGHHLETSERKERKESSKSHHEELRLKRRRSRSREHEDRN 256
Query: 299 RRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGS 358
RRS+SLSPRA KR SY+ REH L SHS K SGRQ SD +++++T + S H RRH G
Sbjct: 257 RRSISLSPRAHKRGSYHKREHVELSSHSVKERSGRQQSDAENNQLTNSSSSRHQRRHGGF 316
Query: 359 TSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSV-P----SNVHTSNQA 413
SGLGGYSPRKR+TEAA KTPSP RSPEKKSAKWD+AP ET +V P SN + NQ
Sbjct: 317 ASGLGGYSPRKRKTEAAIKTPSPAKRSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQT 376
Query: 414 ASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPL 473
ASSN HE+VS+ PV S KPL+G+S+S+ + V+ +S+QLTQ+ P+RRL +EN+P
Sbjct: 377 ASSNIHEVVSAVPVVSAPMKPLSGVSLSSLSTAMKVATESIQLTQATHPIRRLYMENIPA 436
Query: 474 SASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
SASEKA+M+ LNNFL+SSGV H+ G+ PCI C+
Sbjct: 437 SASEKAVMDCLNNFLISSGVHHIQGTQPCISCI 469
>gi|297823139|ref|XP_002879452.1| hypothetical protein ARALYDRAFT_321074 [Arabidopsis lyrata subsp.
lyrata]
gi|297325291|gb|EFH55711.1| hypothetical protein ARALYDRAFT_321074 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 231/510 (45%), Positives = 292/510 (57%), Gaps = 87/510 (17%)
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSE 267
+KK R L D D+S K + E KRK++N D +KNR+ + +K+ D GK H ++VSE
Sbjct: 8 GSKKRLRSLVVADVPRDESSIKHDNEDKRKNQNGDHKKNREMTISKRHDSGKVHSVEVSE 67
Query: 268 RKEKKESPKSRHGNSRLKRRRSRSRER-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHS 326
R E+KE PK+ + R KRRRSRSR+ +DR +R L PRA+K T+
Sbjct: 68 RMERKEQPKAHERDMREKRRRSRSRDHGQDRQKRPSPL-PRAEKATA------------- 113
Query: 327 TKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP 386
S S LGGYSPRKRR EA+ K SP N S
Sbjct: 114 -------------------------------SKSELGGYSPRKRREEASTKAVSPPNLSS 142
Query: 387 EKKSAKWDVAPVETYSVPSN-VHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
EKKSAKWD+AP T + S V + QAA+ A+ +S + KPL +
Sbjct: 143 EKKSAKWDLAPTVTSGMFSGPVFSGLQAATQTAYPTISE--ASLMLLKPLMEGTFRTPPP 200
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S DSVQLT+S RPMRRL EN+P SASEK+L+E N ++LSSG H+ GS PCI C
Sbjct: 201 RQITSFDSVQLTESTRPMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISC 260
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+I +EK QA VEFLT +DASAAL DGCSF+GS LKI+RPK++V
Sbjct: 261 IINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYV---------------- 304
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQL 625
+MEIV FGPLKAY F N D + CA++EY D
Sbjct: 305 ----------------------GTTLMEIVSVFGPLKAYRFVSNNDLNQQCAYLEYTDGS 342
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLK 685
VT KA AGLNG+K+GG V+TAV A D S + + NPPF+GIP HA PLL KP +LKLK
Sbjct: 343 VTLKACAGLNGMKLGGSVITAVCAFPDASSVAVNENPPFYGIPGHAKPLLGKPKHILKLK 402
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARF 715
NV +PE F+ LSE EV+E+L+DVRLECAR+
Sbjct: 403 NVVDPEDFTLLSEQEVKEILDDVRLECARW 432
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 909 ENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARF 965
E +DP+ +FEPGC+F+EY R EA+C AAHSLH RL+D+RIV EY+ LY+ RF
Sbjct: 440 EERDPDD--LFEPGCIFIEYGRPEATCDAAHSLHGRLYDNRIVKAEYVSKELYQIRF 494
>gi|108706081|gb|ABF93876.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 704
Score = 352 bits (902), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 278/704 (39%), Positives = 386/704 (54%), Gaps = 56/704 (7%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSE--NIKEDAMDVSNIPGDCTIENVSDDHKSGRH 79
+++G+AARTRP S +IM RR+ K SE KE + SN S+ +SGR
Sbjct: 15 TSDGTAARTRPLSIQDIMSRREKKTASEAKKTKEGLEENSN--------GKSNHLESGRG 66
Query: 80 HGHKKSP---GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKL-KEDYV 135
+K ++ + K G G K+D ++ +R RD++ ++ K+D +
Sbjct: 67 SKSRKDVREMPLEGSKKDNSDKPGEGSKKDEM--RHTPREERRKDNMRDMQREVSKKDNL 124
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-----SKPNVKSEKLI 190
+ +++K + P + R +K + T++ S K N S KL
Sbjct: 125 KDRPKDISKIDNLKVKVKVPSKDDQRDAPKKSSKKERSSTRDDSHLVDKDKGNHNSHKLS 184
Query: 191 P------SQGRSHNQSIVDSRD-EATKKHSRDLTGKDR-----HADKSGEKSERES--KR 236
+ R N + +RD +AT + S+ GK D+ E+SER + KR
Sbjct: 185 TYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSERRTDGKR 244
Query: 237 KHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRSRSRE 293
R DDEK+ D+ KK D + D + +RK+ +KE+ K H R KRRRS SR+
Sbjct: 245 NSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKRRRSTSRD 304
Query: 294 R-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNG--LSG 350
++R+ RS+S S R Q R SY H+ P + + S R+H + D R + N SG
Sbjct: 305 HYQERHDRSVSPSSREQ-RHSYRGHGHDYYPPYHSMDKSRRKHFETDRHRTSWNDGYSSG 363
Query: 351 HYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPS 405
YRR++ S LGGYSPRKR+T + KT S + RSPEKKSA WD PV T S
Sbjct: 364 SYRRYE---SRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATDL--S 418
Query: 406 NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
N T+ Q+ V PV TT K ++ L N+++DSVQLTQ+ RP+RR
Sbjct: 419 NFVTTLQSTVGLKDSTV---PVNFTTSKQDPNTTIGTILTGSNLAVDSVQLTQATRPLRR 475
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDA 524
L +ENLP A+E L+ LN FLLSS H+ S PC+ CVI ++K QAFVEFLT EDA
Sbjct: 476 LHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTPEDA 535
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
+AAL DG SF GS LKI+RPKE+VE+A +K + +S +V DSPHKIFI GIS
Sbjct: 536 TAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKKPSEEIKLISDVVADSPHKIFIAGISG 595
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+SS+M+MEIV +FGPL AY F NE CAF+EY+D +T KA AGLNG+K+GG +L
Sbjct: 596 VISSEMLMEIVSSFGPLAAYRFLFNEYLGGACAFLEYIDHSITSKACAGLNGMKLGGGIL 655
Query: 645 TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVF 688
TAV + + + PF+GIP A LL++PT+VL+LKNV
Sbjct: 656 TAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLKNVL 699
>gi|108706082|gb|ABF93877.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 720
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 278/703 (39%), Positives = 386/703 (54%), Gaps = 56/703 (7%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSE--NIKEDAMDVSNIPGDCTIENVSDDHKSGRH 79
+++G+AARTRP S +IM RR+ K SE KE + SN S+ +SGR
Sbjct: 15 TSDGTAARTRPLSIQDIMSRREKKTASEAKKTKEGLEENSN--------GKSNHLESGRG 66
Query: 80 HGHKKSP---GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKL-KEDYV 135
+K ++ + K G G K+D ++ +R RD++ ++ K+D +
Sbjct: 67 SKSRKDVREMPLEGSKKDNSDKPGEGSKKDEM--RHTPREERRKDNMRDMQREVSKKDNL 124
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-----SKPNVKSEKLI 190
+ +++K + P + R +K + T++ S K N S KL
Sbjct: 125 KDRPKDISKIDNLKVKVKVPSKDDQRDAPKKSSKKERSSTRDDSHLVDKDKGNHNSHKLS 184
Query: 191 P------SQGRSHNQSIVDSRD-EATKKHSRDLTGKDR-----HADKSGEKSERES--KR 236
+ R N + +RD +AT + S+ GK D+ E+SER + KR
Sbjct: 185 TYTSGRVGKSRGGNHGEITARDGDATIQESQKRPGKRWIDEPVGNDRIKERSERRTDGKR 244
Query: 237 KHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRSRSRE 293
R DDEK+ D+ KK D + D + +RK+ +KE+ K H R KRRRS SR+
Sbjct: 245 NSRGFDDEKSSQVDRPTLKKQDAVRLQDPRHFDRKDGRKENAKLHHEEPRSKRRRSTSRD 304
Query: 294 R-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNG--LSG 350
++R+ RS+S S R Q R SY H+ P + + S R+H + D R + N SG
Sbjct: 305 HYQERHDRSVSPSSREQ-RHSYRGHGHDYYPPYHSMDKSRRKHFETDRHRTSWNDGYSSG 363
Query: 351 HYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPS 405
YRR++ S LGGYSPRKR+T + KT S + RSPEKKSA WD PV T S
Sbjct: 364 SYRRYE---SRLGGYSPRKRKTAPKDEQTTIKTASLVIRSPEKKSATWDQLPVATDL--S 418
Query: 406 NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
N T+ Q+ V PV TT K ++ L N+++DSVQLTQ+ RP+RR
Sbjct: 419 NFVTTLQSTVGLKDSTV---PVNFTTSKQDPNTTIGTILTGSNLAVDSVQLTQATRPLRR 475
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS-LPCIGCVIQREKGQAFVEFLTAEDA 524
L +ENLP A+E L+ LN FLLSS H+ S PC+ CVI ++K QAFVEFLT EDA
Sbjct: 476 LHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKRQAFVEFLTPEDA 535
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
+AAL DG SF GS LKI+RPKE+VE+A +K + +S +V DSPHKIFI GIS
Sbjct: 536 TAALSFDGRSFGGSSLKIRRPKEYVEMAHVAPKKPSEEIKLISDVVADSPHKIFIAGISG 595
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+SS+M+MEIV +FGPL AY F NE CAF+EY+D +T KA AGLNG+K+GG +L
Sbjct: 596 VISSEMLMEIVSSFGPLAAYRFLFNEYLGGACAFLEYIDHSITSKACAGLNGMKLGGGIL 655
Query: 645 TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNV 687
TAV + + + PF+GIP A LL++PT+VL+LKNV
Sbjct: 656 TAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLKNV 698
>gi|297801306|ref|XP_002868537.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp.
lyrata]
gi|297314373|gb|EFH44796.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp.
lyrata]
Length = 1370
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 253/677 (37%), Positives = 361/677 (53%), Gaps = 108/677 (15%)
Query: 59 SNIPGDCTIENVSDDHKSGRHHGHKKSPGVDVHTSEEYVKVGSGKKED---NALTKNVDS 115
+ + G+ ++ VSD H+S + G+ +S + EE V+ S KKE+ ++ +N+D
Sbjct: 498 AQLLGNDLVDKVSDYHESEK--GYDRSEKL---RREERVRTSSRKKEEAISSSREENLDK 552
Query: 116 -----------SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNR 164
R+ +GE+ ETKL E++ S RR K E + +K +
Sbjct: 553 RKKEEEPAANRKRKAEGESSTAETKLVEEH---SKDRRRKKEETNFSCKEERRDKKKKKE 609
Query: 165 GSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHAD 224
+ + T+ + + ++ Q RS +++ SR K R L DR D
Sbjct: 610 DRKIEGELPTTEIITMTDRDRLDETDSEQARSALENLSSSR-----KRLRSLVVTDRPRD 664
Query: 225 KSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRHGNSRL 284
++ K + +KRK++N D +KNR+++ +K+ D GK H ++VSER +K+E PKS R
Sbjct: 665 ENSMKPDNGNKRKNQNGDHKKNRERNMSKRHDPGKVHSVEVSERWQKREQPKSHQREMRK 724
Query: 285 KRRRSRSRER-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRV 343
KRRRSRSR+ +DR +RS L PRAQK TS + R+HE ++ SG+ H + + ++V
Sbjct: 725 KRRRSRSRDHGQDRQKRSSPL-PRAQKATSRHKRDHEERLENAVTDRSGKHHFNDNGNKV 783
Query: 344 TGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSV 403
++ +R+ S S LGGYSPRKRR EA+AK SP N S EKKSAKWD+AP T ++
Sbjct: 784 AST-VNNKSKRYSASKSELGGYSPRKRREEASAKAVSPPNLSSEKKSAKWDLAPAVTAAM 842
Query: 404 PS-NVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRP 462
S +V + QAA+ A+ S + T KPL A+ S+DSVQLT+S R
Sbjct: 843 FSGSVFSGLQAAAQTAYPTNSE--ASLTLLKPLMEAPFRTPSAREITSVDSVQLTESTRR 900
Query: 463 MRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAE 522
MRRL EN+ SASEK+L+E N+++LSSG H+ GS PCI C+I +EK QA VEFLT
Sbjct: 901 MRRLYAENVSDSASEKSLIECFNSYMLSSGSNHIKGSEPCISCIINKEKSQALVEFLTPH 960
Query: 523 DASAALCCDGCSFSGSILKIKRPKEFVE-------------------------------- 550
DASAAL DGCSF+G LKI+RPK +VE
Sbjct: 961 DASAALSLDGCSFAGLNLKIRRPKGYVETTGVYVGYVIIHIQEGDEAVCYVMVTIHEAGF 1020
Query: 551 ------VASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
+ SGE K + +++S VKDS +KIFIGG +++SS+M+MEIV FGPLKAY
Sbjct: 1021 QTVAIFMQSGELAKKEPATNAISDNVKDSSNKIFIGGFPKSISSEMLMEIVSVFGPLKAY 1080
Query: 605 HFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
F +N D + CAF+E + NPPF
Sbjct: 1081 RFVINNDLNKRCAFLEVNE-------------------------------------NPPF 1103
Query: 665 HGIPKHALPLLKKPTEV 681
+GIP+HA PLL KP E+
Sbjct: 1104 YGIPEHAKPLLGKPKEM 1120
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 23 NEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVSDDHKSGRHHGH 82
NEGSAARTRP S DEI +RRK K EN+ E+ + V+ + G+ +E D H+S + G+
Sbjct: 19 NEGSAARTRPTSVDEIRLRRKRKESLENVTEETVGVAQLLGNDLVEKAPDYHESEK--GY 76
Query: 83 KKSPGVDVHTSEEYVKVGSGKKED 106
+S + EE+VK S KKED
Sbjct: 77 DRSKNL---RHEEHVKDSSRKKED 97
>gi|2459426|gb|AAB80661.1| putative splicing factor U2AF large chain [Arabidopsis thaliana]
Length = 475
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 271/511 (53%), Gaps = 113/511 (22%)
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSE 267
+KK R L D D+S K + KRK++N + +KNR+ + +K+ D GK H ++VSE
Sbjct: 8 CSKKRLRSLVVADVPRDESSIKPDNGDKRKNQNGNHKKNREINMSKRHDPGKVHSVEVSE 67
Query: 268 RKEKKESPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLPSHST 327
R E++E PK SR+R+ R +KR R+H
Sbjct: 68 RWERREQPK--------------SRQRDLR-----------EKRRRSRSRDH-------- 94
Query: 328 KISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPE 387
G R+ S S LGGYSPRKRR +A+ K SP N S E
Sbjct: 95 ----------------------GQDRQKSASKSELGGYSPRKRREQASTKAASPPNLSSE 132
Query: 388 KKSAKWDVAPVETYSVPSN-VHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVS--ASL 444
KKSAKW +A T + S+ V + QAA+ A+ +S + T KPL +
Sbjct: 133 KKSAKWGLAATVTAGMFSDSVFSGLQAATQTAYPTISE--ASLTLLKPLMVMDAPFRTPP 190
Query: 445 AKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
A+ S DSVQLT+S R MRRL EN+P SASEK+L+E N ++LSSG H+ GS PCI
Sbjct: 191 ARQTTSFDSVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCIS 250
Query: 505 CVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVD 564
C+ FLT +DASAAL DGCSF+GS LKI+RPK++
Sbjct: 251 CI-----------FLTPQDASAALSLDGCSFAGSNLKIRRPKDY---------------- 283
Query: 565 SVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQ 624
+MEIV FGPLKAY F N D + CAF+EY D
Sbjct: 284 --------------------------LMEIVSVFGPLKAYRFVSNNDLNQRCAFLEYTDG 317
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKL 684
VT KA AGLNG+++GG V+TAV A D S + + NPPF+GIP HA PLL KP +LKL
Sbjct: 318 SVTLKACAGLNGMRLGGSVITAVCAFPDASSVAVNENPPFYGIPSHAKPLLGKPKNILKL 377
Query: 685 KNVFNPEGFSSLSELEVEEVLEDVRLECARF 715
KNV +PE +S SE EV+E+LEDVRLECAR+
Sbjct: 378 KNVVDPEDLTSFSEQEVKEILEDVRLECARW 408
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 918 IFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARF 965
+FE GC+F+EY R EA+C AAHSLH RL+D+RIV EY+ LY+ RF
Sbjct: 425 VFETGCIFIEYRRPEATCDAAHSLHGRLYDNRIVKAEYVSKELYQIRF 472
>gi|30685698|ref|NP_850209.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330253740|gb|AEC08834.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 294/511 (57%), Gaps = 36/511 (7%)
Query: 51 IKEDAMDVSNIPGDCTIENVSDDHKSGRHHGHKKSPGVDVHTSEEYVKVGSGKKEDNALT 110
IKED + + + G+ +E VSD H++ + G+ +S + + EE VK S KKE+
Sbjct: 477 IKEDHVGAAQLLGNDLVEMVSDYHETEK--GYDRSKKL---SREERVKDSSRKKEEA--- 528
Query: 111 KNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKL 170
+ SSR+ EN D K K+D + SN +R + E + E + RG +
Sbjct: 529 --ISSSRE---ENLD---KQKKDE-STSNRKRKAEGECSTAETESIEEHSKDRRGKKEET 579
Query: 171 KADVTKETSSKP--------NVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRH 222
++ +E K N K E IP+ + +++ D +KK R L D
Sbjct: 580 NSNCREERRDKKMKKEDLASNRKIEGEIPT---TETKTMTDRDGLCSKKRLRSLVVADVP 636
Query: 223 ADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRHGNS 282
D+S K + KRK++N + +KNR+ + +K+ D GK H ++VSER E++E PKSR +
Sbjct: 637 RDESSIKPDNGDKRKNQNGNHKKNREINMSKRHDPGKVHSVEVSERWERREQPKSRQRDL 696
Query: 283 RLKRRRSRSRER-EDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSS 341
R KRRRSRSR+ +DR +RS L PRA+K TS + R HE + K SG+ H + +
Sbjct: 697 REKRRRSRSRDHGQDRQKRSSPL-PRAEKATSRHKRNHEERSENVVKDRSGKHHCNDNED 755
Query: 342 RVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETY 401
+VT +S RR+ S S LGGYSPRKRR +A+ K SP N S EKKSAKW +A T
Sbjct: 756 KVTST-VSNKSRRYSASKSELGGYSPRKRREQASTKAASPPNLSSEKKSAKWGLAATVTA 814
Query: 402 SVPSN-VHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASL--AKLNVSMDSVQLTQ 458
+ S+ V + QAA+ A+ +S + T KPL + A+ S DSVQLT+
Sbjct: 815 GMFSDSVFSGLQAATQTAYPTISE--ASLTLLKPLMVMDAPFRTPPARQTTSFDSVQLTE 872
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
S R MRRL EN+P SASEK+L+E N ++LSSG H+ GS PCI C+I +EK QA VEF
Sbjct: 873 STRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISCIINKEKSQALVEF 932
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEFV 549
LT +DASAAL DGCSF+GS LKI+RPK++V
Sbjct: 933 LTPQDASAALSLDGCSFAGSNLKIRRPKDYV 963
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 8 KEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTI 67
K+K + G +L + EGSAARTRP S +EI +RRK K EN+KE+ + + + G +
Sbjct: 6 KQKENRDGHETLVN-EEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAAQLLGYDLV 64
Query: 68 ENVSDDHKS 76
E SD H+S
Sbjct: 65 EKASDYHES 73
>gi|147795302|emb|CAN69457.1| hypothetical protein VITISV_036574 [Vitis vinifera]
Length = 630
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 212/352 (60%), Gaps = 23/352 (6%)
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT 679
+YVDQ VT KA AGLNG+K+GGQVLT VQA+ + M+N+GN PF+GIP+HA PLL++PT
Sbjct: 298 QYVDQSVTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAKPLLERPT 357
Query: 680 EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEG 739
+VLKLKNV NP+ SSLSE E+EE+LED+RLEC RFG+VKSVN+VKY +S++ T
Sbjct: 358 QVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVKYNNSHVLTWVVMVN 417
Query: 740 NENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDN 799
+ + G G D+ + ++ TD K D KEV E E N + D+
Sbjct: 418 SMKAETLGGG----TDDGSSDISGIKPPTDVK-----------DLKEVDEVVERNGISDD 462
Query: 800 RPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCN 859
+ + + +E + ++D++ AV+ S+ + +G+P Q+N +K ++K
Sbjct: 463 KSLTDLIKNELCEPSQIDSNTAVKEPGCPDGSDDIPRGLPDQLNNMKHEVELRNNKAADV 522
Query: 860 IQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM----GMQSSAVENGDNENQDPNQ 915
IQ E + +NK E+L LEE N G S E+ G++S D+E N
Sbjct: 523 IQ-EDIIIKNKLMTVEELKLEETN---RKLLGTSAELDSSPGIKSDFTGKNDSEKGLCNL 578
Query: 916 GHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
+FE GCV VEY R EASCMAAH LH R FDDR+V V Y+ L+LYR +F +
Sbjct: 579 DDMFEVGCVLVEYGRTEASCMAAHCLHGRYFDDRVVVVGYVALDLYRMKFPR 630
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED 611
+IFIGGISR LSS M+MEI AFGPLKAY F+VNED
Sbjct: 132 RIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNED 167
>gi|115450613|ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group]
gi|113547378|dbj|BAF10821.1| Os03g0138100 [Oryza sativa Japonica Group]
Length = 404
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 220/418 (52%), Gaps = 46/418 (11%)
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQL 625
+S +V DSPHKIFI GIS +SS+M+MEIV +FGPL AY F NE CAF+EY+D
Sbjct: 17 ISDVVADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGACAFLEYIDHS 76
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLK 685
+T KA AGLNG+K+GG +LTAV + + + PF+GIP A LL++PT+VL+LK
Sbjct: 77 ITSKACAGLNGMKLGGGILTAVNVFPNSTEQAFNEASPFYGIPDSAKSLLEEPTKVLQLK 136
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNIS----TIQACE--- 738
NVF+ E + LS+ E+EE+LEDVR+ECARFG+VKS+NVVKY S+ + TI CE
Sbjct: 137 NVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSINVVKYPASSDNTTGDTITECEDGS 196
Query: 739 ---------GNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVME 789
GN + GV ++ N T+ + EV D + + + D K +
Sbjct: 197 TKIEPKEYGGNVSCTETGVECSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDT 256
Query: 790 AGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSP 849
GE + + T GDE +TD VE DST Q +
Sbjct: 257 RGECD--------APTAGDE-------NTDQGVEADQTDSTD--------AQDDARGTIE 293
Query: 850 CAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNE 909
H D +++ + + K E+ G G S ++ AV+ DN
Sbjct: 294 RGHADADPASLETSCSTAPGDGADKSGRENEQQGG-----AGVSESNTEKAPAVDARDNA 348
Query: 910 NQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
+ E GC+ VE++R EA+C+AAHSLH R F RIV+ Y P +LY ++ +
Sbjct: 349 LA--SNTSALEAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 404
>gi|224110606|ref|XP_002315575.1| predicted protein [Populus trichocarpa]
gi|222864615|gb|EEF01746.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 135/174 (77%)
Query: 549 VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
+ + +GE EKS A++D++ IVKDSPHKIFIGGIS+ LSSKM+MEI AFGPLKAY FE
Sbjct: 14 IFMQTGELEKSAAAIDAIGDIVKDSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFEN 73
Query: 609 NEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIP 668
++D +EP AF+EY D+ VT KA AGLNG+K+GGQV+TA+QAV + S + GN F I
Sbjct: 74 SKDPDEPFAFLEYADESVTFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQIS 133
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVN 722
+HA LL+KPTEVLKLKNVF+ E SSLS EVEEVLEDVRLECAR+ +V V
Sbjct: 134 QHAKALLEKPTEVLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARYYNVDKVT 187
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 43/57 (75%)
Query: 909 ENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARF 965
E D N G IFE GCVFVE+ R EA+CMAAH LH RLFDDR V VEY PL++Y ARF
Sbjct: 194 EVDDCNLGLIFERGCVFVEFRRTEAACMAAHCLHGRLFDDRAVVVEYFPLDIYLARF 250
>gi|413956975|gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 378
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 202/396 (51%), Gaps = 36/396 (9%)
Query: 590 MVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
M+MEIV AFGPL AY F N + PCAF+EY D+ VT KA AGLNG+ +GG+VLTAV
Sbjct: 1 MLMEIVSAFGPLAAYRFLFNNELGGPCAFLEYADRSVTSKACAGLNGMMLGGRVLTAVHV 60
Query: 650 VLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVR 709
+ + + PF+GIP +A LLK+PT+VL+LKNVF E + LS+ E+EE LEDVR
Sbjct: 61 FPNPHVEAANEASPFYGIPDNAKLLLKEPTKVLQLKNVFEREEYMLLSKSELEETLEDVR 120
Query: 710 LECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGV-GQNLTNDETNEKGERLEEVT 768
+EC RFG+VKSVNVV+Y + +S + EN + ++ E K V
Sbjct: 121 VECTRFGAVKSVNVVEYPAAGVSAAE-----ENIVELKIECTEFSDTENIAKAVSEYSVP 175
Query: 769 DHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARD 828
SI + +D+K+V E + KD S + LCE + +A E D
Sbjct: 176 IIPSIDVLNHSVASDTKDVDLIPESQDQKDKHLPSN------AALCESEAPVADEDAELD 229
Query: 829 STSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGN--- 885
T + P ++K T ++ ++A +D +E+ +G+
Sbjct: 230 ETQSRAALPTPQHAEADHTEAAVDENKHTGAGKV-------TATATDDDAVEKSHGDPRT 282
Query: 886 SEAFT-----------GASNEMGMQSSAVENGDNENQ---DPNQGHIFEPGCVFVEYMRA 931
SE G +E G + + E Q + G +FEPG V VE++R
Sbjct: 283 SETCNPAGPTDKAEKPGRYSEQGAGDVTEDRPEKEAQAVGTSDTGFVFEPGSVLVEFLRE 342
Query: 932 EASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
EA+CMAAHSLH R F +R V Y P +LY ++ +
Sbjct: 343 EAACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 378
>gi|218189760|gb|EEC72187.1| hypothetical protein OsI_05261 [Oryza sativa Indica Group]
Length = 485
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 128/177 (72%)
Query: 550 EVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
+++ +++K V + +S +V+DSPHKIFI GI R +SSKM+ +IV +FG L AY F N
Sbjct: 237 DMSHADSKKPVEEIKLISDVVRDSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFN 296
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
ED CAF+EY+D +T KA AGLNG+K+GG V+TAV + D + PFHGIP
Sbjct: 297 EDLGGACAFLEYIDHSITSKACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPA 356
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
+ PLL PT+VL+LKNVF+ E +S LS+ EV+ VLEDVR++CAR+G+VKS+NVV+Y
Sbjct: 357 NPKPLLAVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEY 413
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 837 GVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM 896
VPTQV LK+ + + +++ + E+ + ++ +N E G+ N
Sbjct: 363 AVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSIN-VVEYPAGSDNT- 420
Query: 897 GMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYI 956
++ AV+ DN N E GC+ VE++ EAS MAAHSLH R F RIV+ Y
Sbjct: 421 --KAPAVDARDNALASNNTA--LEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGYA 476
Query: 957 PLNL 960
P +L
Sbjct: 477 PYDL 480
>gi|115442323|ref|NP_001045441.1| Os01g0956600 [Oryza sativa Japonica Group]
gi|57900079|dbj|BAD88141.1| splicing factor family protein-like [Oryza sativa Japonica Group]
gi|57900192|dbj|BAD88277.1| splicing factor family protein-like [Oryza sativa Japonica Group]
gi|113534972|dbj|BAF07355.1| Os01g0956600 [Oryza sativa Japonica Group]
gi|215736836|dbj|BAG95765.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 608
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 128/177 (72%)
Query: 550 EVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
+++ +++K V + +S +V+DSPHKIFI GI R +SSKM+ +IV +FG L AY F N
Sbjct: 353 DMSHADSKKPVEEIKLISDVVRDSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFN 412
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
ED CAF+EY+D +T KA AGLNG+K+GG V+TAV + D + PFHGIP
Sbjct: 413 EDLGGACAFLEYIDHSITSKACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPA 472
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
+ PLL PT+VL+LKNVF+ E +S LS+ EV+ VLEDVR++CAR+G+VKS+NVV+Y
Sbjct: 473 NPKPLLAVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEY 529
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 837 GVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM 896
VPTQV LK+ + + +++ + E+ + ++ +N E G+ N
Sbjct: 479 AVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSIN-VVEYPAGSDNT- 536
Query: 897 GMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYI 956
++ AV+ DN N E GC+ VE++ EAS MAAHSLH R F RIV+ Y
Sbjct: 537 --KAPAVDARDNALASNNTA--LEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGYA 592
Query: 957 PLNL 960
P +L
Sbjct: 593 PYDL 596
>gi|222619898|gb|EEE56030.1| hypothetical protein OsJ_04814 [Oryza sativa Japonica Group]
Length = 658
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 128/177 (72%)
Query: 550 EVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
+++ +++K V + +S +V+DSPHKIFI GI R +SSKM+ +IV +FG L AY F N
Sbjct: 353 DMSHADSKKPVEEIKLISDVVRDSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFN 412
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
ED CAF+EY+D +T KA AGLNG+K+GG V+TAV + D + PFHGIP
Sbjct: 413 EDLGGACAFLEYIDHSITSKACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPA 472
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
+ PLL PT+VL+LKNVF+ E +S LS+ EV+ VLEDVR++CAR+G+VKS+NVV+Y
Sbjct: 473 NPKPLLAVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEY 529
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 837 GVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM 896
VPTQV LK+ + + +++ + E+ + ++ +N E G+ N
Sbjct: 479 AVPTQVLQLKNVFDQEEYSLLSKYEVDAVLEDVRVKCARYGAVKSINV-VEYPAGSDNT- 536
Query: 897 GMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYI 956
++ AV+ DN N E GC+ VE++ EAS MAAHSLH R F RIV+ Y
Sbjct: 537 --KAPAVDARDNALASNNTA--LEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGYA 592
Query: 957 PLNL 960
P +L
Sbjct: 593 PYDL 596
>gi|326492263|dbj|BAK01915.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 622
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 193/334 (57%), Gaps = 32/334 (9%)
Query: 233 ESKRKHRNRDDEKNR--DKSAAKKVDLGKGHDLKVSERKE-KKESPKSRHGNSRLKRRRS 289
E+KRK DDEK D+ KK D + K +R + ++E K H RLKRRRS
Sbjct: 279 EAKRKIHGFDDEKTSYVDRPVLKKHDSARSQVSKHYDRNDARREYGKPYHEEPRLKRRRS 338
Query: 290 RSRERED-RNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVT---G 345
RSR+ + R RSLSLSPR Q+R SY+ +H P GR++++ D R + G
Sbjct: 339 RSRDHDQGRRDRSLSLSPREQRR-SYHGHDHGNYPP-------GRKYAENDRHRTSDNVG 390
Query: 346 NGLSGHYRRHDGSTSGLGGYSPRKRRT-----EAAAKTPSPINRSPEKKSAKWDVAPVET 400
G G Y+R++ S LGGYSPRKR+T + + P+ RS EKK WD P
Sbjct: 391 QG-GGSYQRYE---SRLGGYSPRKRKTVPQDEQLSTTITPPVIRSSEKKPVTWDQPPAAA 446
Query: 401 YSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN 460
S T+ Q S + S ++ Q P ++ L+ + S+DSVQLTQ+
Sbjct: 447 DQ--SIFFTNLQPIVSQTSSVSVS--FSAPKQNP--ATALDTILSGNSSSVDSVQLTQAT 500
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSG-VQHVHGS-LPCIGCVIQREKGQAFVEF 518
RP+RRL +ENL SASE AL+ LN+FLLS+G + + S PC+ C I +EK QAFVEF
Sbjct: 501 RPLRRLHIENLASSASEDALIGCLNDFLLSTGDINRIQRSKQPCLSCTINKEKRQAFVEF 560
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA 552
LT EDA+AAL DG SF+GS LKI+RPKE++E+A
Sbjct: 561 LTPEDATAALSFDGRSFNGSTLKIRRPKEYIEMA 594
>gi|334184658|ref|NP_850210.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330253741|gb|AEC08835.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 322
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 590 MVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
M+MEIV FGPLKAY F N D + CAF+EY D VT KA AGLNG+++GG V+TAV A
Sbjct: 1 MLMEIVSVFGPLKAYRFVSNNDLNQRCAFLEYTDGSVTLKACAGLNGMRLGGSVITAVCA 60
Query: 650 VLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVR 709
D S + + NPPF+GIP HA PLL KP +LKLKNV +PE +S SE EV+E+LEDVR
Sbjct: 61 FPDASSVAVNENPPFYGIPSHAKPLLGKPKNILKLKNVVDPEDLTSFSEQEVKEILEDVR 120
Query: 710 LECARFGSVKSVNVV--KYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEV 767
LECARFG +KS+N++ K D +S E+T S + ++ +E +E E+ E++
Sbjct: 121 LECARFGVIKSINILEHKSKDITVSETNPLLNLESTDSKEMNVSVI-EEKDEGSEKAEDI 179
Query: 768 TDH 770
D+
Sbjct: 180 ADN 182
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 918 IFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARF 965
+FE GC+F+EY R EA+C AAHSLH RL+D+RIV EY+ LY+ RF
Sbjct: 272 VFETGCIFIEYRRPEATCDAAHSLHGRLYDNRIVKAEYVSKELYQIRF 319
>gi|357452335|ref|XP_003596444.1| hypothetical protein MTR_2g077660 [Medicago truncatula]
gi|355485492|gb|AES66695.1| hypothetical protein MTR_2g077660 [Medicago truncatula]
Length = 325
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 182/337 (54%), Gaps = 18/337 (5%)
Query: 637 LKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSL 696
+ +GG+VLT VQA+ D S ++N PP +GIP+HA PLL++PT+VL++KNVF E SSL
Sbjct: 1 MNLGGEVLTVVQAMPDASPVENDSKPPSYGIPEHAEPLLREPTQVLEIKNVFTVESLSSL 60
Query: 697 SELEVEEVLEDVRLECARFGSVKSVNVVKYG-DSNIST-----IQACEGNENTASAGVGQ 750
S+ +EE+LEDVRLECARFG+VKS++V ++ D+N++T I+ E T
Sbjct: 61 SDTVIEEILEDVRLECARFGTVKSIHVARHCKDNNLATKSEEVIKKVGSEEPTPDT---H 117
Query: 751 NLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEP 810
+TND + EE T S +E D K + E + + N + + D
Sbjct: 118 TVTNDAESSFS---EEATYSNSKGTGGMESHGD-KVLEEDKDNDGTSVNVDKNAEVFDNT 173
Query: 811 SQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENK 870
+ L +D V + QG P Q NT D P HD + +I +E N
Sbjct: 174 TCQEHLVSDSTVIDAGNEDLPSSTIQGCPDQGNTPNDDPELHDSMIANDIDVEKTVIGNT 233
Query: 871 SSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMR 930
S L+E G SE AS E+ ++ D E D H+FE G V VEY R
Sbjct: 234 DSENMVYPLQE--GFSEC--DASLELVGNRKDIKEEDEEEDD-TYNHVFEEGSVLVEYAR 288
Query: 931 AEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
+EA AAH +HRRLFD R+V+V+Y+ L+LYR RF+K
Sbjct: 289 SEACRSAAHCMHRRLFDGRLVSVQYVALSLYRERFTK 325
>gi|270011684|gb|EFA08132.1| hypothetical protein TcasGA2_TC005736 [Tribolium castaneum]
Length = 432
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 43/346 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 63 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 113
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 114 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 159
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVA-SVDSV 566
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G AE S++ +
Sbjct: 160 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMAESSISVPAGVI 218
Query: 567 SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH------FEVNEDHEEPCAFIE 620
S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ F +++ + AF E
Sbjct: 219 STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDTAFGLSKGY----AFAE 274
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK--- 677
Y+D +T +AIAGLNG+++G + L +A + N+ P I L L+
Sbjct: 275 YIDITMTDQAIAGLNGMQLGDKRLIVQRASVGAK---NATVIPAVQIQVPGLSLVGASGP 331
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+S+ +
Sbjct: 332 PTEVLCLLNMVTPDELK--DEEEYEDILEDIKEECNKYGVVRSIEI 375
>gi|91088649|ref|XP_974465.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor 2 [Tribolium castaneum]
Length = 450
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 43/346 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 81 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 131
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 132 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 177
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVA-SVDSV 566
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G AE S++ +
Sbjct: 178 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMAESSISVPAGVI 236
Query: 567 SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH------FEVNEDHEEPCAFIE 620
S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ F +++ + AF E
Sbjct: 237 STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDTAFGLSKGY----AFAE 292
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL---KK 677
Y+D +T +AIAGLNG+++G + L +A + N+ P I L L+
Sbjct: 293 YIDITMTDQAIAGLNGMQLGDKRLIVQRASVGAK---NATVIPAVQIQVPGLSLVGASGP 349
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+S+ +
Sbjct: 350 PTEVLCLLNMVTPDELK--DEEEYEDILEDIKEECNKYGVVRSIEI 393
>gi|198432988|ref|XP_002130386.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 1 [Ciona intestinalis]
Length = 482
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 181/353 (51%), Gaps = 31/353 (8%)
Query: 384 RSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
+ P+K WDV PV V + + QAA P+ +T+Q + I+ A+
Sbjct: 97 KKPKKAYKYWDVPPVGYEHVTPLQYKAMQAAGQ--------IPLMATSQT-MGSITAEAT 147
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
L V + Q+T R RRL V N+P +E A+M+F NN + +G+ G P +
Sbjct: 148 L---QVPVAGSQMT---RQARRLYVGNIPFGVTEDAMMDFFNNQMQIAGLAQAPGQ-PIL 200
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
I +K AF+EF + ++ + AL DG +F LKI+RP ++ + + ++
Sbjct: 201 AVQINLDKNFAFLEFRSVDETTQALAFDGINFMNQSLKIRRPSDYKPLPGSLEQPAIHLP 260
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V+DS HK+FIGG+ L+ V E++ +FGPL+A++ + + AF E+
Sbjct: 261 GVISTVVQDSQHKMFIGGLPNYLNDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAEF 320
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD------GSIMDNSGNPPFHGIPKHALPLL 675
D +T +AIAGLNG+++G + L +A + G+IM P IP A
Sbjct: 321 ADYSLTDQAIAGLNGMQLGDKKLIVQRASIGAKNNPHGAIM----APVTLQIPGMAHATG 376
Query: 676 KKP-TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYG 727
P T VL L N+ PE + + E EE++EDV+ EC + GSV S+ + + G
Sbjct: 377 AGPATTVLCLMNMVLPEELT--DDEEYEEIMEDVKDECGKLGSVVSLEIPRPG 427
>gi|332375140|gb|AEE62711.1| unknown [Dendroctonus ponderosae]
Length = 374
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 176/344 (51%), Gaps = 43/344 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 64 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 114
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E +ME+ N + SG+ G+ P + C I
Sbjct: 115 -------------RQARRLYVGNIPFGVTEDEMMEYFNQQMHLSGLAQAAGN-PVLACQI 160
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVA-SVDSV 566
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G +E S++ +
Sbjct: 161 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMSENSISVPAGVI 219
Query: 567 SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH------FEVNEDHEEPCAFIE 620
S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ F +++ + AF E
Sbjct: 220 STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDTAFGLSKGY----AFAE 275
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK--- 677
Y+D +T +AIAGLNG+++G + L +A + N+ P I L L+
Sbjct: 276 YIDISMTDQAIAGLNGMQLGDKRLIVQRASVGAK---NATVLPAVQIQVPGLSLVGASGP 332
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
PTEVL L N+ P+ E E E++LED++ EC ++G V+S+
Sbjct: 333 PTEVLCLLNMVTPDELK--DEEEYEDILEDIKEECNKYGVVRSI 374
>gi|114052735|ref|NP_001040494.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Bombyx mori]
gi|95103122|gb|ABF51502.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Bombyx mori]
Length = 417
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 170/341 (49%), Gaps = 30/341 (8%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 45 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 95
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ MEF N + SG+ G+ P + C I
Sbjct: 96 -------------RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQI 141
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVS 567
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + E +S
Sbjct: 142 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVIS 201
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQL 625
+V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + + AF EYVD
Sbjct: 202 TVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDIS 261
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH-GIPKHALPLLKKPTEVL 682
+T +AIAGLNG+++G + L +A + S + +G P + L PTEVL
Sbjct: 262 MTDQAIAGLNGMQLGDKKLIVQRASIGAKNSTLALTGAAPVQIQVAGLTLAGAGPPTEVL 321
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ P+ E E E++LED++ EC ++G V+S+ +
Sbjct: 322 CLLNMVTPDELR--DEEEYEDILEDIKEECNKYGVVRSIEI 360
>gi|47575746|ref|NP_001001217.1| U2 small nuclear RNA auxiliary factor 2 isoform 2 [Xenopus
(Silurana) tropicalis]
gi|45709722|gb|AAH67966.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
[Xenopus (Silurana) tropicalis]
Length = 456
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 77 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 120
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 179
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 239
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT
Sbjct: 240 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTD 299
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + + + P G+ + + PTEVL
Sbjct: 300 QAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVL 359
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC ++G+VKS+ +
Sbjct: 360 CLMNMVLPE--ELLDDDEYEEIVEDVRDECGKYGAVKSIEI 398
>gi|348510221|ref|XP_003442644.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 467
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 186/352 (52%), Gaps = 33/352 (9%)
Query: 384 RSPEKKSAK-WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSA 442
R+ +K++ K WDV P + + + QAA + + TSTT G++ +
Sbjct: 80 RTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIALLA---TSTT----TGVAAAP 132
Query: 443 SLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPC 502
+ V + Q+T R RRL V N+P +E+++ EF N + +G+ S P
Sbjct: 133 T----QVPIVGSQMT---RQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQA-PSNPV 184
Query: 503 IGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS 562
+ I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ + + +
Sbjct: 185 LAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHV 244
Query: 563 VDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
VS +V DSPHK+FIGG+ L+ V E++ +FGPLKA++ + + AF E
Sbjct: 245 PGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 304
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIPKHALPLLKK 677
YVD T +A+AGLNG+++G + L +A + + + + SGN P +P L++
Sbjct: 305 YVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPVSTSGNTPV----TLQVPGLQR 360
Query: 678 ------PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE + + + EE+LED+R EC ++G+V+S+ +
Sbjct: 361 LQNSGMPTEVLCLLNMVMPEEL--VDDEDYEEILEDIREECCKYGTVRSIEI 410
>gi|198432986|ref|XP_002130494.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 2 [Ciona intestinalis]
Length = 472
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 35/350 (10%)
Query: 384 RSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
+ P+K WDV PV V + + QAA S + T + P+AG
Sbjct: 97 KKPKKAYKYWDVPPVGYEHVTPLQYKAMQAAGQIPLMATSQTMGSITAEVPVAG------ 150
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
+Q R RRL V N+P +E A+M+F NN + +G+ G P +
Sbjct: 151 -------------SQMTRQARRLYVGNIPFGVTEDAMMDFFNNQMQIAGLAQAPGQ-PIL 196
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
I +K AF+EF + ++ + AL DG +F LKI+RP ++ + + ++
Sbjct: 197 AVQINLDKNFAFLEFRSVDETTQALAFDGINFMNQSLKIRRPSDYKPLPGSLEQPAIHLP 256
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V+DS HK+FIGG+ L+ V E++ +FGPL+A++ + + AF E+
Sbjct: 257 GVISTVVQDSQHKMFIGGLPNYLNDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAEF 316
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHG---IPKHALPLLKKP 678
D +T +AIAGLNG+++G + L +A + NP HG IP A P
Sbjct: 317 ADYSLTDQAIAGLNGMQLGDKKLIVQRASIGA-----KNNP--HGAIMIPGMAHATGAGP 369
Query: 679 -TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYG 727
T VL L N+ PE + + E EE++EDV+ EC + GSV S+ + + G
Sbjct: 370 ATTVLCLMNMVLPEELT--DDEEYEEIMEDVKDECGKLGSVVSLEIPRPG 417
>gi|157132061|ref|XP_001662443.1| splicing factor u2af large subunit [Aedes aegypti]
gi|108881728|gb|EAT45953.1| AAEL002818-PA [Aedes aegypti]
Length = 418
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 37/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 43 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 93
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 94 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 139
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-- 565
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G + + SV
Sbjct: 140 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMTDSAAVSVPEKF 198
Query: 566 ---VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
+S +V DSPHKIFIGG+ L+ V E++ +FG LKA++ + + AF E
Sbjct: 199 SGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAE 258
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL---KK 677
YV+ +T +AIAGLNG+++G + L +A + + + P I L L+
Sbjct: 259 YVEYTITDQAIAGLNGMQLGDKKLIVQRASVGAKNANVAAVAPVQ-IQVPGLSLVGSSGP 317
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 318 PTEVLCLLNMVTPDELK--DEEEYEDILEDIKEECNKYGVVRSVEI 361
>gi|170054347|ref|XP_001863087.1| splicing factor u2af large subunit [Culex quinquefasciatus]
gi|167874693|gb|EDS38076.1| splicing factor u2af large subunit [Culex quinquefasciatus]
Length = 438
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 37/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 63 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 113
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 114 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 159
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-- 565
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G + +VA V
Sbjct: 160 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMTDSAVAPVQEKF 218
Query: 566 ---VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
+S +V DSPHKIFIGG+ L+ V E++ +FG LKA++ + + AF E
Sbjct: 219 SGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAE 278
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL---KK 677
YV+ +T +AIAGLNG+++G + L +A + + + P I L L+
Sbjct: 279 YVEYSITDQAIAGLNGMQLGDKKLIVQRASVGAKNANVAAVAPVQ-IQVPGLSLVGSSGP 337
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+S +
Sbjct: 338 PTEVLCLLNMVTPDELK--DEEEYEDILEDIKEECNKYGVVRSAEI 381
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 40/343 (11%)
Query: 386 PEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
P+KK WDV PV + + QAA V S P+ G SV+
Sbjct: 113 PKKKYKFWDVPPVGYEHLTPKEYKELQAAGQIPRNNVQS-------AVPVVGPSVTC--- 162
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
QS RRL V N+P SE A+++F N + G+ G+ P + C
Sbjct: 163 ------------QS----RRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQAPGN-PVLAC 205
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+ +K AF+EF + ++ +A + DG +F G LKI+RP+++ +++ ++
Sbjct: 206 QMNLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLGNMM---- 261
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD 623
VS IV DSPHKIFIGG+ L+++ V E++ +FG LKA++ E + + AF EY+D
Sbjct: 262 VSNIVPDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFAEYLD 321
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL---LKKPTE 680
+T +AIAGLNG+++G + L + + +N F I + L PTE
Sbjct: 322 PSLTDQAIAGLNGMQLGDKNLVVQLSCANAR--NNVAQNTFPQIQVAGIDLSHGAGPPTE 379
Query: 681 VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
VL L N+ + + E E++LED+R ECA++G VKS+ +
Sbjct: 380 VLCLMNMVTEDELK--DDEEYEDILEDIREECAKYGIVKSLEI 420
>gi|328721668|ref|XP_003247369.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Acyrthosiphon pisum]
Length = 451
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 184/373 (49%), Gaps = 57/373 (15%)
Query: 376 AKTPSPINRSPEKK-SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKP 434
+++ SP N+S +K S WDV P + + + QAA ++ P T T P
Sbjct: 54 SRSKSPKNKSRRRKPSLYWDVPPPGFEHIAPLQYKAMQAAGQIP---ANTMPDTPQTAVP 110
Query: 435 LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ 494
+ G +++ R RRL V N+P +E +MEF N + SG+
Sbjct: 111 VVGSTIT-------------------RQARRLYVGNIPFGVTEDEMMEFFNQQMHLSGLA 151
Query: 495 HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASG 554
G+ P + C I +K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G
Sbjct: 152 QAAGN-PVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPTPG 209
Query: 555 EAEKS------------VASVDSVS---GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFG 599
E + + DS S G V DSPHKIFIGG+ L+ + V E++ +FG
Sbjct: 210 MTESNPVTNYNSGMTLDMMKYDSSSFGLGTVPDSPHKIFIGGLPAYLNDEQVKELLTSFG 269
Query: 600 PLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMD 657
LKA++ + + AF EY D ++T +AIAGLNG+++G + L +A +
Sbjct: 270 QLKAFNLVKDAATGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASI------ 323
Query: 658 NSGNPPFHGIPKHA-LPLLK------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRL 710
+ NP +P +P L PTEVL L N+ P+ E E E++LED+R
Sbjct: 324 GAKNPGLGQVPVTIQVPGLTVVGTAGPPTEVLCLLNMVTPDELK--DEEEYEDILEDIRE 381
Query: 711 ECARFGSVKSVNV 723
EC ++G V+S+ +
Sbjct: 382 ECNKYGVVRSLEI 394
>gi|147902896|ref|NP_001080595.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus laevis]
gi|111185517|gb|AAH44032.2| U2af2 protein [Xenopus laevis]
Length = 456
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 151/275 (54%), Gaps = 11/275 (4%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+
Sbjct: 127 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFL 185
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V DS HK
Sbjct: 186 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHK 245
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 634
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 246 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 305
Query: 635 NGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVF 688
NG+++G + L +A + + + P G+ + + PTEVL L N+
Sbjct: 306 NGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMV 365
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + + E EE++EDVR EC ++G+VKS+ +
Sbjct: 366 VPE--ELIDDDEYEEIVEDVRDECGKYGAVKSIEI 398
>gi|328721670|ref|XP_001951521.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 416
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 176/354 (49%), Gaps = 41/354 (11%)
Query: 380 SPINRSPEKK-SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
SP N+S +K S WDV P + + + QAA ++ P T T P+ G
Sbjct: 37 SPKNKSRRRKPSLYWDVPPPGFEHIAPLQYKAMQAAGQIP---ANTMPDTPQTAVPVVGS 93
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
+++ R RRL V N+P +E +MEF N + SG+ G
Sbjct: 94 TIT-------------------RQARRLYVGNIPFGVTEDEMMEFFNQQMHLSGLAQAAG 134
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK 558
+ P + C I +K AF+EF + ++ + A+ DG +F G LKI+RP ++
Sbjct: 135 N-PVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPTPGMTESN 193
Query: 559 SVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPC 616
V + +S + +SPHKIFIGG+ L+ + V E++ +FG LKA++ + +
Sbjct: 194 PVTNYNSGMTLDMNSPHKIFIGGLPAYLNDEQVKELLTSFGQLKAFNLVKDAATGLSKGY 253
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHA-LPLL 675
AF EY D ++T +AIAGLNG+++G + L +A + + NP +P +P L
Sbjct: 254 AFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASI------GAKNPGLGQVPVTIQVPGL 307
Query: 676 K------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED+R EC ++G V+S+ +
Sbjct: 308 TVVGTAGPPTEVLCLLNMVTPDELK--DEEEYEDILEDIREECNKYGVVRSLEI 359
>gi|289741197|gb|ADD19346.1| splicing factor U2AF large subunit [Glossina morsitans morsitans]
Length = 423
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 170/346 (49%), Gaps = 36/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P P H + A + P + + P A + V S
Sbjct: 47 KPSLYWDVPP------PGFEHIT--PLQYKAMQAAGQIPANALPEIPQAAVPVVGSTI-- 96
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E +MEF N + +G+ G+ P + C I
Sbjct: 97 ------------TRQARRLYVGNIPFGVTEDEMMEFFNQQMHLTGLAQAAGN-PVLACQI 143
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVE----VASGEAEKSVASV 563
+K AF+EF + ++ + A+ DG SF G LKI+RP ++ V S + VA+
Sbjct: 144 NLDKNFAFLEFRSTDETTQAMAFDGISFKGQSLKIRRPHDYQPMPGVVESTPVAQPVAN- 202
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 203 GVISAVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLRAFNLVKDAATGLSKGYAFCEY 262
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN---SGNPPFHGIPKHALPLLK-K 677
+D +T +AIAGLNG+++G + L +A + N + P +P ++ +
Sbjct: 263 IDHSITDQAIAGLNGMQLGDKKLIVQRASVGAKNAQNNHTTAAPVMIQVPGLSMVGISGP 322
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 323 PTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECNKYGVVRSVEI 366
>gi|347968827|ref|XP_311994.4| AGAP002908-PA [Anopheles gambiae str. PEST]
gi|333467820|gb|EAA08228.4| AGAP002908-PA [Anopheles gambiae str. PEST]
Length = 446
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 173/346 (50%), Gaps = 37/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 71 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 121
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 122 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 167
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-- 565
+K AF+EF + ++ + A+ D +F G LKI+RP ++ + G + + +V
Sbjct: 168 NLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDY-QPMPGMTDSAAVNVPEKF 226
Query: 566 ---VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
+S +V DSPHKIFIGG+ L+ V E++ +FG LKA++ + + AF E
Sbjct: 227 SGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLGKGYAFAE 286
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL---KK 677
YV+ VT +AIAGLNG+++G + L +A + + + P I L L+
Sbjct: 287 YVEYTVTDQAIAGLNGMQLGDKKLIVQRASVGAKNSNAAVVAPVQ-IQVPGLSLVGSSGP 345
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED+R EC ++G V+SV +
Sbjct: 346 PTEVLCLLNMVTPDELK--DEEEYEDILEDIREECNKYGVVRSVEI 389
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 40/343 (11%)
Query: 386 PEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
P+KK WDV PV + + QAA V S P+ G SV+
Sbjct: 138 PKKKYKFWDVPPVGYEHLTPKEYKELQAAGQIPRNNVQS-------AVPVVGPSVTC--- 187
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
QS RRL V N+P SE A+++F N + G+ G+ P + C
Sbjct: 188 ------------QS----RRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQAPGN-PVLAC 230
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+ +K AF+EF + ++ +A + DG +F G LKI+RP+++ +++ ++
Sbjct: 231 QMNLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLGNMM---- 286
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD 623
VS IV DSPHKIFIGG+ L+++ V E++ +FG LKA++ E + + AF EY+D
Sbjct: 287 VSNIVPDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFAEYLD 346
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL---LKKPTE 680
+T +AIAGLNG+++G + L + + +N F I + L PTE
Sbjct: 347 PSLTDQAIAGLNGMQLGDKNLVVQLSCANAR--NNVAQNTFPQIQVAGIDLSHGAGPPTE 404
Query: 681 VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
VL L N+ + + E E++LED+R ECA++G VKS+ +
Sbjct: 405 VLCLMNMVTEDELK--DDEEYEDILEDIREECAKYGIVKSLEI 445
>gi|348510223|ref|XP_003442645.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 467
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 183/351 (52%), Gaps = 32/351 (9%)
Query: 384 RSPEKKSAK-WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSA 442
R+ +K++ K WDV P + + + QAA + + TSTT G++ +
Sbjct: 81 RTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIALLA---TSTT----TGVAAAP 133
Query: 443 SLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPC 502
+ V + Q+T R RRL V N+P +E+++ EF N + +G+ S P
Sbjct: 134 T----QVPIVGSQMT---RQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQA-PSNPV 185
Query: 503 IGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS 562
+ I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ + + +
Sbjct: 186 LAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHV 245
Query: 563 VDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
VS +V DSPHK+FIGG+ L+ V E++ +FGPLKA++ + + AF E
Sbjct: 246 PGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 305
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKHALPLLKK- 677
YVD T +A+AGLNG+++G + L +A S+ + NP +P L++
Sbjct: 306 YVDISATDQAVAGLNGMQLGDKKLIVQRA----SVGAKNANPTSIIETPVTLQVPGLQRL 361
Query: 678 -----PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE + + + EE+LED+R EC ++G+V+S+ +
Sbjct: 362 QNSGMPTEVLCLLNMVMPEEL--VDDEDYEEILEDIREECCKYGTVRSIEI 410
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 40/343 (11%)
Query: 386 PEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
P+KK WDV PV + + QAA V S P+ G SV+
Sbjct: 138 PKKKYKFWDVPPVGYEHLTPKEYKELQAAGQIPRNNVQS-------AVPVVGPSVTC--- 187
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
QS RRL V N+P SE A+++F N + G+ G+ P + C
Sbjct: 188 ------------QS----RRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQAPGN-PVLAC 230
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+ +K AF+EF + ++ +A + DG +F G LKI+RP+++ +++ ++
Sbjct: 231 QMNLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLGNMM---- 286
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD 623
VS IV DSPHKIFIGG+ L+++ V E++ +FG LKA++ E + + AF EY+D
Sbjct: 287 VSNIVPDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFAEYLD 346
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL---LKKPTE 680
+T +AIAGLNG+++G + L + + +N F I + L PTE
Sbjct: 347 PSLTDQAIAGLNGMQLGDKNLVVQLSCANAR--NNVAQNTFPQIQVAGIDLSHGAGPPTE 404
Query: 681 VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
VL L N+ + + E E++LED+R ECA++G VKS+ +
Sbjct: 405 VLCLMNMVTEDELK--DDEEYEDILEDIREECAKYGIVKSLEI 445
>gi|45387787|ref|NP_991252.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
gi|41389016|gb|AAH65869.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
Length = 475
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 187/373 (50%), Gaps = 36/373 (9%)
Query: 368 RKRRTEAAAKTPSP-INRSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEM 421
R RR++ P ++RSP ++ K WDV P + + + QAA
Sbjct: 64 RHRRSDHTQNHPQENVSRSPHREKKKKIKKYWDVPPPGFEHITPMQYKAMQAAG------ 117
Query: 422 VSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKA 479
Q P + + + L V+ V + +Q R RRL V N+P +E++
Sbjct: 118 ----------QIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEES 167
Query: 480 LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI 539
+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F
Sbjct: 168 MMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQAQS 226
Query: 540 LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFG 599
LKI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++ +FG
Sbjct: 227 LKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSIHKLFIGGLPNYLNDDQVKELLTSFG 286
Query: 600 PLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGS 654
PLKA++ + + AF EYVD V +AIAGLNG+++ + L +A + + +
Sbjct: 287 PLKAFNLVKDSATGLSKGYAFCEYVDVNVNDQAIAGLNGMQLADKKLLVQRASVGAKNAT 346
Query: 655 IMDNSGNPPFHGIPK-HALPLLKK---PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRL 710
+ + P +P + P+++ PTEVL L N+ PE + + E EE++EDV+
Sbjct: 347 MTSINETPVTLQVPGLTSNPMIQMGGIPTEVLCLMNMVAPEEL--IDDEEYEEIVEDVKE 404
Query: 711 ECARFGSVKSVNV 723
EC+++G VKS+ +
Sbjct: 405 ECSKYGQVKSIEI 417
>gi|195042782|ref|XP_001991497.1| GH12033 [Drosophila grimshawi]
gi|195134983|ref|XP_002011915.1| GI14308 [Drosophila mojavensis]
gi|193901255|gb|EDW00122.1| GH12033 [Drosophila grimshawi]
gi|193909169|gb|EDW08036.1| GI14308 [Drosophila mojavensis]
Length = 416
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 35/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 39 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 89
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 90 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 135
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQDLKIRRPHDYQPMPGITDTPAVKPAVVSS 195
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EY
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDEQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLK-K 677
VD +T ++IAGLNG+++G + L +A + N+ N +P + +
Sbjct: 256 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTSQSVMLQVPGLSTVVTSGP 315
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 316 PTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 359
>gi|386764548|ref|NP_001245708.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
gi|383293438|gb|AFH07421.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
Length = 427
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 45/351 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 50 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 100
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 101 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 146
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 147 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSS 206
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 207 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 266
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN---------PPFHGIPKHAL 672
VD +T ++IAGLNG+++G + L +A + N+ N P +
Sbjct: 267 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVTSG- 325
Query: 673 PLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 326 ----PPTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 370
>gi|348510219|ref|XP_003442643.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 466
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 183/351 (52%), Gaps = 32/351 (9%)
Query: 384 RSPEKKSAK-WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSA 442
R+ +K++ K WDV P + + + QAA + + TSTT G++ +
Sbjct: 80 RTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIALLA---TSTT----TGVAAAP 132
Query: 443 SLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPC 502
+ V + Q+T R RRL V N+P +E+++ EF N + +G+ S P
Sbjct: 133 T----QVPIVGSQMT---RQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQA-PSNPV 184
Query: 503 IGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS 562
+ I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ + + +
Sbjct: 185 LAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHV 244
Query: 563 VDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
VS +V DSPHK+FIGG+ L+ V E++ +FGPLKA++ + + AF E
Sbjct: 245 PGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 304
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKHALPLLKK- 677
YVD T +A+AGLNG+++G + L +A S+ + NP +P L++
Sbjct: 305 YVDISATDQAVAGLNGMQLGDKKLIVQRA----SVGAKNANPTSIIETPVTLQVPGLQRL 360
Query: 678 -----PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE + + + EE+LED+R EC ++G+V+S+ +
Sbjct: 361 QNSGMPTEVLCLLNMVMPEEL--VDDEDYEEILEDIREECCKYGTVRSIEI 409
>gi|195448282|ref|XP_002071589.1| GK10063 [Drosophila willistoni]
gi|194167674|gb|EDW82575.1| GK10063 [Drosophila willistoni]
Length = 416
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 172/346 (49%), Gaps = 35/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 39 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 89
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 90 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 135
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSS 195
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLK-K 677
VD +T ++IAGLNG+++G + L +A + N+ N +P + +
Sbjct: 256 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSTVVTSGP 315
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 316 PTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 359
>gi|358338608|dbj|GAA57078.1| splicing factor U2AF large subunit [Clonorchis sinensis]
Length = 518
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 175/369 (47%), Gaps = 55/369 (14%)
Query: 385 SPEKKSAKWDVAPV--------------ETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
+P WDV P + +P NV+ + Q AH + P+T T
Sbjct: 118 TPPLIYKYWDVPPPGFEHVTPAQYKAMQASGQIPVNVYAAGQIPMP-AH--APNAPLTLT 174
Query: 431 TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLS 490
T P AG +V R RRL V N+P +A+E+ +MEF N + +
Sbjct: 175 TNIPFAGSAVC-------------------RQARRLYVGNIPFTATEENMMEFFNKQMRA 215
Query: 491 SGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVE 550
G+ GS P I I EK AF+EF + ++ + L DG F LK++RP+++
Sbjct: 216 QGLVQAEGS-PIIAVQINMEKNFAFLEFRSVDETTQGLALDGILFHNQALKLRRPRDYAP 274
Query: 551 VASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EV 608
+ SV VS +V+DSPHK+F+GG+ L+ V E++ +FGPLK ++ +
Sbjct: 275 LPGVSETPSVIVPGVVSTVVQDSPHKVFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDG 334
Query: 609 NEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIP 668
+ + AF EYVD VT A AGLNG+++G + L +A + + P +P
Sbjct: 335 STGLSKGYAFCEYVDPNVTDHACAGLNGMQLGDKKLIVQRASVGAKHNATTAAPALLQLP 394
Query: 669 KHALPLLK--------------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECAR 714
L++ PTEVL L N+ +P + E E+++EDVR EC++
Sbjct: 395 GLTDTLVQNTTGTGNITIRSGGPPTEVLCLMNMIDPA--ELEDDEEYEDIVEDVRAECSK 452
Query: 715 FGSVKSVNV 723
+G V+S+ +
Sbjct: 453 YGVVRSLEI 461
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 181/365 (49%), Gaps = 49/365 (13%)
Query: 380 SPINRSPEKK-SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
SP N+S +K S WDV P + + + QAA ++ P T T P+ G
Sbjct: 53 SPKNKSRRRKPSLYWDVPPPGFEHIAPLQYKAMQAAGQIP---ANTMPDTPQTAVPVVGS 109
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
+++ R RRL V N+P +E +MEF N + SG+ G
Sbjct: 110 TIT-------------------RQARRLYVGNIPFGVTEDEMMEFFNQQMHLSGLAQAAG 150
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK 558
+ P + C I +K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G E
Sbjct: 151 N-PVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPTPGMTES 208
Query: 559 S------------VASVDSVS---GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKA 603
+ + DS S G V DSPHKIFIGG+ L+ + V E++ +FG LKA
Sbjct: 209 NPVTNYNSGMTLDMMKYDSSSFGLGTVPDSPHKIFIGGLPAYLNDEQVKELLTSFGQLKA 268
Query: 604 YHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN 661
++ + + AF EY D ++T +AIAGLNG+++G + L +A + G+ G
Sbjct: 269 FNLVKDAATGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASI-GAKNPGLGQ 327
Query: 662 PPFHGIPKHALPLL---KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
P I L ++ PTEVL L N+ P+ E E E++LED+R EC ++G V
Sbjct: 328 APVT-IQVPGLTVVGTAGPPTEVLCLLNMVTPDELK--DEEEYEDILEDIREECNKYGVV 384
Query: 719 KSVNV 723
+S+ +
Sbjct: 385 RSLEI 389
>gi|195167317|ref|XP_002024480.1| GL15893 [Drosophila persimilis]
gi|198469588|ref|XP_001355063.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
gi|194107878|gb|EDW29921.1| GL15893 [Drosophila persimilis]
gi|198146942|gb|EAL32119.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 172/346 (49%), Gaps = 35/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 41 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 91
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 92 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 137
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 138 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSS 197
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 198 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 257
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLK-K 677
VD +T ++IAGLNG+++G + L +A + N+ N +P + +
Sbjct: 258 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNASNSSQSVMLQVPGLSTVVSSGP 317
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 318 PTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 361
>gi|194770152|ref|XP_001967161.1| GF19596 [Drosophila ananassae]
gi|190619281|gb|EDV34805.1| GF19596 [Drosophila ananassae]
Length = 416
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 172/346 (49%), Gaps = 35/346 (10%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 39 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 89
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 90 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 135
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSS 195
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLK-K 677
VD +T ++IAGLNG+++G + L +A + N+ N +P + +
Sbjct: 256 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNASNTTQSVMLQVPGLSTVVTSGP 315
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 316 PTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 359
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 176/351 (50%), Gaps = 38/351 (10%)
Query: 377 KTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLA 436
+ P P KK WDV P + + + QAA V S P+
Sbjct: 101 REPEPQKPREPKKYRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQS-------AVPVV 153
Query: 437 GISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
G SV+ QS RRL V N+P +E+A+++F N + G+
Sbjct: 154 GPSVTC---------------QS----RRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQA 194
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + C I +K AF+EF + ++ +A + DG +F G LK++RP+++ +
Sbjct: 195 PGN-PILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY---QPSQN 250
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEP 615
+ S VS IV DS +KIFIGG+ L+ V E++C+FGPLKA+ V+ + + +
Sbjct: 251 TFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKG 310
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL 675
AF EY+D +T +AIAGLNG+++G + L VQ N+ N P + L
Sbjct: 311 YAFAEYLDPTLTDQAIAGLNGMQLGDKQLV-VQLACANQQRHNT-NLPNSASAIAGIDLS 368
Query: 676 K---KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + TE+L L N+ + ++ E EE+LEDVR EC+++G V+S+ +
Sbjct: 369 QGAGRATEILCLMNMVTEDELK--ADDEYEEILEDVRDECSKYGIVRSLEI 417
>gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|386764552|ref|NP_001245710.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
gi|195351420|ref|XP_002042232.1| GM13406 [Drosophila sechellia]
gi|195479195|ref|XP_002100800.1| GE15975 [Drosophila yakuba]
gi|195555160|ref|XP_002077042.1| GD24494 [Drosophila simulans]
gi|4033485|sp|Q24562.1|U2AF2_DROME RecName: Full=Splicing factor U2AF 50 kDa subunit; AltName: Full=U2
auxiliary factor 50 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|349761|gb|AAA03548.1| RNA binding protein [Drosophila melanogaster]
gi|7293214|gb|AAF48596.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|17861976|gb|AAL39465.1| LD03714p [Drosophila melanogaster]
gi|194124075|gb|EDW46118.1| GM13406 [Drosophila sechellia]
gi|194188324|gb|EDX01908.1| GE15975 [Drosophila yakuba]
gi|194203060|gb|EDX16636.1| GD24494 [Drosophila simulans]
gi|220943258|gb|ACL84172.1| U2af50-PA [synthetic construct]
gi|220953438|gb|ACL89262.1| U2af50-PA [synthetic construct]
gi|383293440|gb|AFH07423.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
Length = 416
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 45/351 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 39 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 89
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 90 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 135
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSS 195
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN---------PPFHGIPKHAL 672
VD +T ++IAGLNG+++G + L +A + N+ N P +
Sbjct: 256 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVTSG- 314
Query: 673 PLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 315 ----PPTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 359
>gi|194893848|ref|XP_001977952.1| GG19328 [Drosophila erecta]
gi|190649601|gb|EDV46879.1| GG19328 [Drosophila erecta]
Length = 416
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 45/351 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 39 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 89
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 90 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 135
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSS 195
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EY
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN---------PPFHGIPKHAL 672
VD +T ++IAGLNG+++G + L +A + N+ N P +
Sbjct: 256 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVTSG- 314
Query: 673 PLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 315 ----PPTEVLCLLNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 359
>gi|62859443|ref|NP_001016998.1| U2 small nuclear RNA auxiliary factor 2 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|89269799|emb|CAJ83531.1| U2 (RNU2) small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
gi|115292148|gb|AAI22001.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
Length = 465
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 172/350 (49%), Gaps = 38/350 (10%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 77 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 120
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 179
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 239
Query: 571 KDSPHKIFIGGISRTLS---------SKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFI 619
DS HK+FIGG+ L+ S V E++ +FGPLKA++ + + AF
Sbjct: 240 PDSAHKLFIGGLPNYLNDDQVTMESLSLWVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 299
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALP 673
EYVD VT +AIAGLNG+++G + L +A + + + P G+ +
Sbjct: 300 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQ 359
Query: 674 LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PTEVL L N+ PE L + E EE++EDVR EC ++G+VKS+ +
Sbjct: 360 MGGHPTEVLCLMNMVLPE--ELLDDDEYEEIVEDVRDECGKYGAVKSIEI 407
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 176/351 (50%), Gaps = 38/351 (10%)
Query: 377 KTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLA 436
+ P P KK WDV P + + + QAA V S P+
Sbjct: 98 REPEPQKPREPKKYRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQS-------AVPVV 150
Query: 437 GISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
G SV+ QS RRL V N+P +E+A+++F N + G+
Sbjct: 151 GPSVTC---------------QS----RRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQA 191
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + C I +K AF+EF + ++ +A + DG +F G LK++RP+++ +
Sbjct: 192 PGN-PILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY---QPSQN 247
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEP 615
+ S VS IV DS +KIFIGG+ L+ V E++C+FGPLKA+ V+ + + +
Sbjct: 248 TFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKG 307
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL 675
AF EY+D +T +AIAGLNG+++G + L VQ N+ N P + L
Sbjct: 308 YAFAEYLDPTLTDQAIAGLNGMQLGDKQLV-VQLACANQQRHNT-NLPNSASAIAGIDLS 365
Query: 676 K---KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + TE+L L N+ + ++ E EE+LEDVR EC+++G V+S+ +
Sbjct: 366 QGAGRATEILCLMNMVTEDELK--ADDEYEEILEDVRDECSKYGIVRSLEI 414
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 150/277 (54%), Gaps = 13/277 (4%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E A++EF N + + G+ G P + + +K AF+
Sbjct: 56 SQMTRQARRLYVGNIPFGVTEDAMVEFFNGKMHNVGLAQAPGP-PVLAVQVNHDKNFAFL 114
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
EF + E+ + A+ DG F LKI+RPK++ + A +V VS +V+DSP+K
Sbjct: 115 EFRSVEETTQAMAFDGILFQNQALKIRRPKDYQAIPGMSATPTVHVPGVVSTVVQDSPNK 174
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLV-------T 627
IFIGG+ L+ V E++ +FGPLKA++ + + AF EYV+ + T
Sbjct: 175 IFIGGLPNYLNDDQVKELLSSFGPLKAFNLVKDSATSLSKGYAFCEYVETNLTDLGWETT 234
Query: 628 PKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKN 686
KAIAGLNG+++G + L +A + N G IP +LP P TE+L L N
Sbjct: 235 DKAIAGLNGMQLGEKKLIVQRASVGAKNAMNQGQQVQINIPGLSLPGTTGPNTEILCLMN 294
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PE + E ++++EDV+ EC ++G V+S+ +
Sbjct: 295 MVTPEELK--DDEEYDDIVEDVKEECQKYGQVRSLEI 329
>gi|410903107|ref|XP_003965035.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 461
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 156/278 (56%), Gaps = 19/278 (6%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+++ EF N + +G+ + P + I ++K AF+
Sbjct: 135 SQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSN-PVLAVQINQDKNFAFL 193
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSV-SGIVKDSPH 575
EF + ++ + A+ DG F G LKI+RP ++ + G +E+ V V V S +V DSPH
Sbjct: 194 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPL-PGISEQPVFHVPGVVSTVVPDSPH 252
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAG 633
K+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD T +A+AG
Sbjct: 253 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDVSATDQAVAG 312
Query: 634 LNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKHALPLLKK------PTEVLKLK 685
LNG+++G + L +A S+ + NP +P L++ PTEVL L
Sbjct: 313 LNGMQLGDKKLIVQRA----SVGAKNANPSAIIEAPVTLQVPGLQRLQNSGMPTEVLCLL 368
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ PE + + + EE+LEDVR EC ++GSV+S+ +
Sbjct: 369 NMVMPEEL--VDDDDYEEILEDVREECCKYGSVRSIEI 404
>gi|410903103|ref|XP_003965033.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 446
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 156/278 (56%), Gaps = 19/278 (6%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+++ EF N + +G+ + P + I ++K AF+
Sbjct: 120 SQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSN-PVLAVQINQDKNFAFL 178
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSV-SGIVKDSPH 575
EF + ++ + A+ DG F G LKI+RP ++ + G +E+ V V V S +V DSPH
Sbjct: 179 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPL-PGISEQPVFHVPGVVSTVVPDSPH 237
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAG 633
K+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD T +A+AG
Sbjct: 238 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDVSATDQAVAG 297
Query: 634 LNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKHALPLLKK------PTEVLKLK 685
LNG+++G + L +A S+ + NP +P L++ PTEVL L
Sbjct: 298 LNGMQLGDKKLIVQRA----SVGAKNANPSAIIEAPVTLQVPGLQRLQNSGMPTEVLCLL 353
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ PE + + + EE+LEDVR EC ++GSV+S+ +
Sbjct: 354 NMVMPEEL--VDDDDYEEILEDVREECCKYGSVRSIEI 389
>gi|410903105|ref|XP_003965034.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 454
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 156/278 (56%), Gaps = 19/278 (6%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+++ EF N + +G+ + P + I ++K AF+
Sbjct: 128 SQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSN-PVLAVQINQDKNFAFL 186
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSV-SGIVKDSPH 575
EF + ++ + A+ DG F G LKI+RP ++ + G +E+ V V V S +V DSPH
Sbjct: 187 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPL-PGISEQPVFHVPGVVSTVVPDSPH 245
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAG 633
K+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD T +A+AG
Sbjct: 246 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDVSATDQAVAG 305
Query: 634 LNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKHALPLLKK------PTEVLKLK 685
LNG+++G + L +A S+ + NP +P L++ PTEVL L
Sbjct: 306 LNGMQLGDKKLIVQRA----SVGAKNANPSAIIEAPVTLQVPGLQRLQNSGMPTEVLCLL 361
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ PE + + + EE+LEDVR EC ++GSV+S+ +
Sbjct: 362 NMVMPEEL--VDDDDYEEILEDVREECCKYGSVRSIEI 397
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 48/354 (13%)
Query: 379 PSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
P P KK WDV P + + + QAA V S P+ G
Sbjct: 120 PEPQKPREPKKYRFWDVPPTGFENTSPMEYKNMQAAGQVPRGSVQS-------AVPVVGP 172
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
SV+ QS RRL V N+P +E+A+++F N + G+ G
Sbjct: 173 SVTC---------------QS----RRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPG 213
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK 558
+ P + C I +K AF+EF + ++ +A + DG +F G LK++RP+++ +
Sbjct: 214 N-PILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY---QPSQNTF 269
Query: 559 SVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEPCA 617
+ S VS IV DS +KIFIGG+ L+ V E++C+FGPLKA+ V+ + + + A
Sbjct: 270 DMNSRMPVSSIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYA 329
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL--- 674
F EY+D +T +AIAGLNG+++G + L VQ N+ H +P A +
Sbjct: 330 FAEYLDPTLTDQAIAGLNGMQLGDKQLV-VQLACANQTRHNT-----H-LPNSASAIAGI 382
Query: 675 -----LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ TEVL L N+ + S+ + EE+LEDVR EC+++G V+S+ +
Sbjct: 383 DLSQGAGRATEVLCLMNMVTEDELK--SDEDYEEILEDVREECSKYGIVRSLEI 434
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 170/312 (54%), Gaps = 40/312 (12%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFL--LSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTA 521
RRL + ++ +E+ L +F N + ++ G Q+ G P + + EK AFVEF +A
Sbjct: 29 RRLYIGSITPEITEENLTKFFNQKMREMNLGQQNASGD-PVLAVQVNYEKNYAFVEFRSA 87
Query: 522 EDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI----VKDSPHKI 577
+DA+AA+ DG F L+I+RPK+++ E S S V G+ V DS HKI
Sbjct: 88 DDATAAMAFDGIIFQSGPLRIRRPKDYM-----GNEYSAPSAMHVPGVVSTNVPDSLHKI 142
Query: 578 FIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPC---AFIEYVDQLVTPKAIAGL 634
F+GG+ L+ + VME++ +FG LKA++ V E++ P AF EYVD+ VT AI GL
Sbjct: 143 FVGGLPTYLNEEQVMELLKSFGELKAFNL-VRENNNGPSKGYAFFEYVDEEVTEVAIQGL 201
Query: 635 NGLKVGGQVLTAVQAVL---DGSIMDNSGNP--PFHGIPKHALPLLKKPTE---VLKLKN 686
NG+++G +VL +A + +G ++ N P +P+ +PL + PT+ +L + N
Sbjct: 202 NGMELGDRVLAVQRASVGSKNGMVVPNPDIPYDQMPEVPRPIMPLNEAPTQDARILLMLN 261
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV--------VKYGDSNISTIQACE 738
+ PE + + E E+ EDV+ ECA+FG+V+ + + KYG + A E
Sbjct: 262 MVVPEDL--VDDEEFAELYEDVKEECAKFGAVEDLRIPRPAKRAGPKYGPA------AVE 313
Query: 739 GNENTASAGVGQ 750
+AGVG+
Sbjct: 314 AQRVDEAAGVGR 325
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 178/370 (48%), Gaps = 40/370 (10%)
Query: 368 RKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPV 427
R R+ + P + R E+ ++ WD+ P+ + + + QA+ A +V P
Sbjct: 27 RPTRSSSITSQPIQVKRRKERINSSWDIPPMGYEHLSPVQYKAMQASGQIASRIVPDAPP 86
Query: 428 TSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNF 487
T SA++A + R RRL V N+P S +++ +M F N
Sbjct: 87 TGE----------SAAIATVT------------RQARRLYVGNIPFSTTDEDMMAFFNEQ 124
Query: 488 LLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRP-- 545
+ H + C +K AF+EF + ++A+ A+ DG S+ G LKI+RP
Sbjct: 125 IHRLNGTQGHDGNAVLTCQTNLDKNFAFLEFRSMDEATQAITFDGISYRGQTLKIRRPHD 184
Query: 546 ---------KEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVC 596
E VE+A G A + AS +S +V DSPHKI+IGG+ L+ + V E++
Sbjct: 185 YHPVASITTAEIVEIAKG-ATQIHASNLPISPVVPDSPHKIYIGGLPTCLNEEQVKELLV 243
Query: 597 AFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS 654
FG L+ ++ + + AF EY+D +T +AIAGLNG+++G + L VQ + G
Sbjct: 244 TFGQLRGFNLVKDTITGQSKGFAFCEYLDPSITEQAIAGLNGMQLGDRKL-VVQRSIAGV 302
Query: 655 IMDNSGNPPFHGIPKHALPL-LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECA 713
+ P +P + + K TEVL L N+ P L E E++ D++ ECA
Sbjct: 303 RNMVASQLPVLQVPGFPIDVSTCKATEVLCLLNMVLPSEL--LDNDEYEDIRTDIKQECA 360
Query: 714 RFGSVKSVNV 723
++G VKS+ +
Sbjct: 361 KYGKVKSLKI 370
>gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large
Length = 475
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP++ +K WDV P + + + QAA Q P +
Sbjct: 79 SPLHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP-----------F 664
AF EYVD VT +AIAGLNG+++G + L VQ G+ +PP
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNATLVSPPSTINQTPVTLQV 360
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 361 PGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 417
>gi|410351435|gb|JAA42321.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 471
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 413
>gi|308477324|ref|XP_003100876.1| CRE-UAF-1 protein [Caenorhabditis remanei]
gi|308264450|gb|EFP08403.1| CRE-UAF-1 protein [Caenorhabditis remanei]
Length = 496
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 55/352 (15%)
Query: 384 RSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
R P KK WDV P ++ + + QA+ + V S P+ G SV+
Sbjct: 131 REP-KKYRFWDVPPNGFENITPMEYKNMQASGAVPRGSVQS-------AVPVVGPSVTC- 181
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
QS RRL V N+P +E+A+++F N + G+ G+ P +
Sbjct: 182 --------------QS----RRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGN-PIL 222
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
C I +K AF+EF + ++ +A + DG +F G LK++RP+++ + ++ +
Sbjct: 223 LCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY------QPSQNTFDM 276
Query: 564 DS---VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEPCAFI 619
++ VS IV DSP+KIFIGG+ L+ V E++C+FGPLKA+ ++ + + + AF
Sbjct: 277 NARMPVSSIVVDSPNKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNMDSQGNSKGYAFA 336
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL----- 674
EY+D +T +AIAGLNG+++G + L VQ N+ H +P A +
Sbjct: 337 EYLDPTLTDQAIAGLNGMQLGDKQLV-VQLACANQTRHNT-----H-LPNSASAIAGIDL 389
Query: 675 ---LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ TE+L L N+ + S+ + EE+LEDVR EC+++G V+S+ +
Sbjct: 390 SQGAGRATEILCLMNMVTEDELR--SDEDYEEILEDVREECSKYGIVRSLEI 439
>gi|226483519|emb|CAX74060.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
gi|226483521|emb|CAX74061.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 518
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 73/378 (19%)
Query: 385 SPEKKSAKWDVAPV--------------ETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
SP WDV P + +P NV+ + Q H + P+T T
Sbjct: 118 SPTLVYKYWDVPPPGFEHVTPAQYKALQASGQIPVNVYAAGQVPMP-VH--APNAPLTLT 174
Query: 431 TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLS 490
T P AG +V R RRL V N+P +A+E+ +MEF N + +
Sbjct: 175 TNVPFAGSAVC-------------------RQARRLYVGNIPFTATEENMMEFFNKQMRA 215
Query: 491 SGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVE 550
G+ G+ P I I EK AF+EF + ++ + L DG F LK++RP+++
Sbjct: 216 QGLIQAEGN-PIIAVQINMEKNFAFLEFRSVDETTQGLALDGVLFQNQALKLRRPRDYAP 274
Query: 551 VASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EV 608
+ + SV VS +V+DSPHKIF+GG+ L+ V E++ +FGPLK ++ +
Sbjct: 275 LPGVSEQPSVIVPGVVSTVVQDSPHKIFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDG 334
Query: 609 NEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVG--------------------GQVLTAVQ 648
+ + AF EYVD VT A AGLNG+++G Q L ++
Sbjct: 335 STGLSKGYAFCEYVDANVTDHACAGLNGMQLGDKKLIVQRASVGAKHTTGVLPQTLLSLP 394
Query: 649 AVLDGSIMDNSGNPPF---HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVL 705
+ DG++ + +G+ G P PTEVL L N+ E + E E+++
Sbjct: 395 GLEDGTVQNTTGSGNITIRSGGP---------PTEVLCLMNMI--ETSELEDDEEYEDIV 443
Query: 706 EDVRLECARFGSVKSVNV 723
EDVR EC+++G V+S+ +
Sbjct: 444 EDVRAECSKYGVVRSLEI 461
>gi|389610875|dbj|BAM19048.1| U2 small nuclear riboprotein auxiliary factor 50 [Papilio polytes]
Length = 422
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 166/341 (48%), Gaps = 35/341 (10%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 50 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT----------- 95
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
R RRL V N+P +E+ MEF N + SG+ G+ P + C I +K
Sbjct: 96 --------RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQINLDKN 146
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A+ DG +F G LKI+RP ++ + E +S +V D
Sbjct: 147 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVISTVVPD 206
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
SPHKIFIGG+ L+ V E++ +FG L+A++ + + + AF EYVD +T +A
Sbjct: 207 SPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 266
Query: 631 IAGLNGLKVGGQVLTAVQA-------VLDGSIMDNSGNPPFH-GIPKHALPLLKKPTEVL 682
IAGLNG+++G + L +A L I +G P + L TEVL
Sbjct: 267 IAGLNGMQLGDKKLIVQRASIGAKNSTLGVYIQSMTGAAPVTLQVAGLTLAGAGPATEVL 326
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ P+ E E E++LED++ EC ++G V+S+ +
Sbjct: 327 CLLNMVTPDELR--DEEEYEDILEDIKEECNKYGCVRSIEI 365
>gi|410351437|gb|JAA42322.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 177/359 (49%), Gaps = 35/359 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP-----------F 664
AF EYVD VT +AIAGLNG+++G + L VQ G+ +PP
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNATLVSPPSTINQTPVTLQV 360
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 361 PGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 417
>gi|256074204|ref|XP_002573416.1| splicing factor u2af large subunit [Schistosoma mansoni]
gi|238658595|emb|CAZ29648.1| splicing factor u2af large subunit, putative [Schistosoma mansoni]
Length = 521
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 73/378 (19%)
Query: 385 SPEKKSAKWDVAPV--------------ETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
SP WDV P + +P NV+ + Q H + P+T T
Sbjct: 121 SPTLVYKYWDVPPPGFEHVTPAQYKALQASGQIPVNVYAAGQVPMP-VH--APNAPLTLT 177
Query: 431 TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLS 490
T P AG +V R RRL V N+P +A+E+ +MEF N + +
Sbjct: 178 TNVPFAGSAVC-------------------RQARRLYVGNIPFTATEENMMEFFNKQMRA 218
Query: 491 SGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVE 550
G+ G+ P I I EK AF+EF + ++ + L DG F LK++RP+++
Sbjct: 219 QGLIQAEGN-PIIAVQINMEKNFAFLEFRSVDETTQGLALDGVLFQNQALKLRRPRDYAP 277
Query: 551 VASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EV 608
+ + SV VS +V+DSPHKIF+GG+ L+ V E++ +FGPLK ++ +
Sbjct: 278 LPGVSEQPSVIVPGVVSTVVQDSPHKIFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDG 337
Query: 609 NEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVG--------------------GQVLTAVQ 648
+ + AF EYVD VT A AGLNG+++G Q L ++
Sbjct: 338 STGLSKGYAFCEYVDANVTDHACAGLNGMQLGDKKLIVQRASVGAKHTTGVLPQTLLSLP 397
Query: 649 AVLDGSIMDNSGNPPF---HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVL 705
+ DG++ + +G+ G P PTEVL L N+ E + E E+++
Sbjct: 398 GLEDGTVQNTTGSGNITIRSGGP---------PTEVLCLMNMI--ETSELEDDEEYEDIV 446
Query: 706 EDVRLECARFGSVKSVNV 723
EDVR EC+++G V+S+ +
Sbjct: 447 EDVRAECSKYGVVRSLEI 464
>gi|405976087|gb|EKC40607.1| Splicing factor U2AF 50 kDa subunit [Crassostrea gigas]
Length = 428
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 158/287 (55%), Gaps = 18/287 (6%)
Query: 449 VSMDSVQLTQSNRPM---------RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
+S+ +V LT + P RRL V N+P +E+A+M+F N+ + +G+ GS
Sbjct: 91 ISVPNVALTNTTVPFAGSAISRQARRLYVGNIPFGVTEEAMMDFFNHQMKMTGLAQAEGS 150
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P I I +K AF+EF + ++ + A+ DG +F G LKI+RP+++ + S
Sbjct: 151 -PVIAVQINLDKNFAFLEFRSVDETTQAMAFDGINFQGQSLKIRRPRDYQPLPGMAETPS 209
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
V VS +V+DSPHKIFIGG+ L+ V E++ +FGPLKA++ + + A
Sbjct: 210 VNVPGVVSTVVQDSPHKIFIGGLPNYLNEDQVKELLTSFGPLKAFNLVKDSATGLSKGYA 269
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL-LK 676
F EYVD VT + AGLNG+++G + L +A L NS P IP L
Sbjct: 270 FCEYVDPNVTDQGCAGLNGMQLGDKKLIVQRASLGAK---NSQVPVQLQIPGLNLNQGAG 326
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE E E E++LEDV+ EC+++G V+S+ +
Sbjct: 327 PPTEVLCLMNMIVPE--ELEDEEEYEDILEDVKEECSKYGVVRSIEI 371
>gi|297302956|ref|XP_001119590.2| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial
[Macaca mulatta]
Length = 432
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 178/359 (49%), Gaps = 29/359 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGD 728
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ + + D
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRLVD 418
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 157/294 (53%), Gaps = 26/294 (8%)
Query: 452 DSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV---QHVHGSLPCIGCVIQ 508
+S + R RRL V N+P +E+ +MEF N L++ G+ Q++ G + C
Sbjct: 90 ESAAIAMITRQARRLYVGNIPFGVTEEEMMEFFNQQLMALGLEGAQYLDGK-AVLTCQTN 148
Query: 509 REKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEVASGEAEKSV--- 560
EK AF+EF + ++A+ AL DG F G ILKI+RP ++ + V++ E+ +S
Sbjct: 149 LEKNFAFLEFRSMDEATQALNFDGIIFRGQILKIRRPHDYQPVPSIRVSNMESYRSFRLP 208
Query: 561 --------ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNE 610
S +VS IV DSP+KI++GG+ L + +++ +FG LK + ++N
Sbjct: 209 ATTTTNPPISTIAVSSIVPDSPNKIYVGGLPTCLDQDQIKDLLQSFGELKGLNLVKDINT 268
Query: 611 DHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH 670
+ AF EY+D VT AIAGL+G+++G + L VQ + G S P +P
Sbjct: 269 SLSKGFAFFEYIDPSVTDHAIAGLHGMQLGDRRLV-VQRSIPGGKNGLSVQQPIVQVPGI 327
Query: 671 ALPL-LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ L PTE+L L N+ PE L E E++ D++ ECA++G V+S+ +
Sbjct: 328 STLLDPGSPTEILCLLNMVLPEEL--LDNEEFEDIRSDIKQECAKYGDVRSIKI 379
>gi|60279268|ref|NP_001012496.1| splicing factor U2AF 65 kDa subunit isoform b [Homo sapiens]
gi|164565377|ref|NP_598432.2| splicing factor U2AF 65 kDa subunit isoform 2 [Mus musculus]
gi|109461136|ref|XP_001060115.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 6 [Rattus
norvegicus]
gi|338709958|ref|XP_001496159.3| PREDICTED: splicing factor U2AF 65 kDa subunit [Equus caballus]
gi|348551787|ref|XP_003461710.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 1 [Cavia
porcellus]
gi|359318549|ref|XP_003638845.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Canis lupus
familiaris]
gi|395861318|ref|XP_003802936.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Otolemur garnettii]
gi|397471087|ref|XP_003807136.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pan paniscus]
gi|403308602|ref|XP_003944746.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Saimiri boliviensis
boliviensis]
gi|14250571|gb|AAH08740.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|27695339|gb|AAH43071.1| U2af2 protein [Mus musculus]
gi|39644972|gb|AAH30574.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|119592810|gb|EAW72404.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_c [Homo
sapiens]
gi|148699339|gb|EDL31286.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_a [Mus musculus]
gi|149016700|gb|EDL75886.1| similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b
[Rattus norvegicus]
gi|261858294|dbj|BAI45669.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|325463253|gb|ADZ15397.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|380783067|gb|AFE63409.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
gi|389618965|gb|AFK92990.1| U2 small nuclear RNA auxiliary factor 2 [Sus scrofa]
gi|410212802|gb|JAA03620.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260572|gb|JAA18252.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291502|gb|JAA24351.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|431902970|gb|ELK09152.1| Splicing factor U2AF 65 kDa subunit [Pteropus alecto]
Length = 471
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 413
>gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus]
Length = 492
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 174/358 (48%), Gaps = 33/358 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 96 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 139
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 140 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 199
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 200 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 258
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 259 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 318
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLT----------AVQAVLDGSIMDNSGNPPFH 665
AF EYVD VT +AIAGLNG+++G + L A L +I
Sbjct: 319 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQVP 378
Query: 666 GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 379 GLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 434
>gi|344270173|ref|XP_003406920.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa
subunit-like [Loxodonta africana]
Length = 471
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 413
>gi|391337926|ref|XP_003743315.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Metaseiulus
occidentalis]
Length = 430
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 170/344 (49%), Gaps = 31/344 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQ--KPLAGISVSASL 444
+K S WDV P + + + AS + + P+T+ Q +P+ G +++
Sbjct: 54 KKPSLYWDV-PAPGFEHITPLQYKAMQASGQIPATLLAPPITTNHQPSQPVIGSTIT--- 109
Query: 445 AKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
R RRL V N+P +E+ ++++ N + + G+ P +
Sbjct: 110 ----------------RQARRLYVGNIPFGCTEQEMIDYFNVQMHACAFAQAQGN-PVLA 152
Query: 505 CVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVD 564
C I +K AF+EF + ++ SAA+ DG +F G LKI+RP ++ + +
Sbjct: 153 CQINMDKNFAFLEFRSIDETSAAMSFDGINFKGQSLKIRRPHDYQPMPGMSESQGSVIPG 212
Query: 565 SVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYV 622
VS +V+DSPHK+FIGG+ L+ V E++ +FG LKA++ + + AF EY
Sbjct: 213 VVSTVVQDSPHKVFIGGLPNYLNEDQVRELLMSFGQLKAFNLVKDTATGLSKGYAFCEYA 272
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNP---PFHGIPKHALPLLKKPT 679
+ +T AIAGLNG+++G + L VQ G+ N P G+P + T
Sbjct: 273 EVTITDDAIAGLNGMQLGDKKLI-VQRASVGAKNSNMAVPVQIQVPGMPNVPIGSSGPAT 331
Query: 680 EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
EVL L N+ P+ E E +++LED++ EC ++G VKS+ +
Sbjct: 332 EVLCLMNLVTPDELR--DEEEYDDILEDIQDECNKYGHVKSIEI 373
>gi|357623461|gb|EHJ74600.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Danaus
plexippus]
Length = 350
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 146/269 (54%), Gaps = 8/269 (2%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
R RRL V N+P +E+ MEF N + SG+ G+ P + C I +K AF+EF
Sbjct: 28 TRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN-PVLACQINLDKNFAFLEFR 86
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFI 579
+ ++ + A+ DG +F G LKI+RP ++ + E +S +V DSPHKIFI
Sbjct: 87 SIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFI 146
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGL 637
GG+ L+ V E++ +FG L+A++ + + + AF EYVD +T +AIAGLNG+
Sbjct: 147 GGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAGLNGM 206
Query: 638 KVGGQVLTAVQAVLDG--SIMDNSGNPPFH-GIPKHALPLLKKPTEVLKLKNVFNPEGFS 694
++G + L +A + S + +G P + L TEVL L N+ P+
Sbjct: 207 QLGDKKLIVQRASIGAKNSTLAMTGAAPVTLQVAGLTLAGAGPATEVLCLLNMVTPDELR 266
Query: 695 SLSELEVEEVLEDVRLECARFGSVKSVNV 723
E E E++LED++ EC ++G V+S+ +
Sbjct: 267 --DEEEYEDILEDIKEECNKYGCVRSIEI 293
>gi|197692223|dbj|BAG70075.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
gi|197692475|dbj|BAG70201.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
Length = 471
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 LSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 413
>gi|386764550|ref|NP_001245709.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
gi|383293439|gb|AFH07422.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
Length = 360
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 147/279 (52%), Gaps = 23/279 (8%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
R RRL V N+P +E+ +MEF N + G+ GS P + C I +K AF+EF
Sbjct: 33 TRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQINLDKNFAFLEFR 91
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASVDSVSGIVKDSPH 575
+ ++ + A+ DG + G LKI+RP ++ + + + +V S +S +V DSPH
Sbjct: 92 SIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSSGVISTVVPDSPH 151
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAG 633
KIFIGG+ L+ V E++ +FG L+A++ + + AF EYVD +T ++IAG
Sbjct: 152 KIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAG 211
Query: 634 LNGLKVGGQVLTAVQAVLDGSIMDNSGN---------PPFHGIPKHALPLLKKPTEVLKL 684
LNG+++G + L +A + N+ N P + PTEVL L
Sbjct: 212 LNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVTSG-----PPTEVLCL 266
Query: 685 KNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ P+ E E E++LED++ EC ++G V+SV +
Sbjct: 267 LNMVTPDELR--DEEEYEDILEDIKEECTKYGVVRSVEI 303
>gi|432908695|ref|XP_004077988.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oryzias latipes]
Length = 458
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 177/356 (49%), Gaps = 34/356 (9%)
Query: 383 NRSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAG 437
NRSP ++ K WDV P + + + QAA Q P
Sbjct: 64 NRSPHREKKKKIKKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATA 107
Query: 438 ISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQH 495
+ + + L V+ V + +Q R RRL V N+P +E+++M+F N + G+
Sbjct: 108 LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQ 167
Query: 496 VHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE 555
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 168 APGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMS 226
Query: 556 AEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHE 613
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ +
Sbjct: 227 ENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLS 286
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIP-- 668
+ AF EYVD + +AIAGLNG+++G + L +A + + ++ + P +P
Sbjct: 287 KGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGL 346
Query: 669 -KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PTEVL L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 347 NSSVTQMGGLPTEVLCLMNMVAPE--ELLDDEEYEEIVEDVREECGKYGQVKSIEI 400
>gi|6005926|ref|NP_009210.1| splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
gi|267188|sp|P26368.4|U2AF2_HUMAN RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=hU2AF(65);
Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor
large subunit
gi|37545|emb|CAA45409.1| splicing factor U2AF [Homo sapiens]
gi|380783065|gb|AFE63408.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
gi|410212804|gb|JAA03621.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260574|gb|JAA18253.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291504|gb|JAA24352.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 177/359 (49%), Gaps = 35/359 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP-----------F 664
AF EYVD VT +AIAGLNG+++G + L VQ G+ +PP
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNATLVSPPSTINQTPVTLQV 360
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 361 PGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 417
>gi|351710523|gb|EHB13442.1| Splicing factor U2AF 65 kDa subunit [Heterocephalus glaber]
Length = 904
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 207/436 (47%), Gaps = 45/436 (10%)
Query: 305 SPRAQKRTS---YYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGL--SGHYRRHD--G 357
SPR +K+ Y+D G H T + Q+ + + +G SG Y+
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGF-EHITPM----QYKAMQAPGPSGGRAQRSGSYQVVSCCW 133
Query: 358 STSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSN 417
+ S L +S R AA SP + +K WDV P + + + QAA
Sbjct: 134 AESSLACWSCRT----AAQSCRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG-- 187
Query: 418 AHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSA 475
Q P + + + L V+ V + +Q R RRL V N+P
Sbjct: 188 --------------QIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGI 233
Query: 476 SEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF 535
+E+A+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F
Sbjct: 234 TEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIF 292
Query: 536 SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIV 595
G LKI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++
Sbjct: 293 QGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELL 352
Query: 596 CAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG 653
+FGPLKA++ + + AF EYVD VT +AIAGLNG+++G + L +A +
Sbjct: 353 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 412
Query: 654 --SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
+ + P G+ + + PTEVL L N+ PE L + E EE++ED
Sbjct: 413 KNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVED 470
Query: 708 VRLECARFGSVKSVNV 723
VR EC+++G VKS+ +
Sbjct: 471 VRDECSKYGLVKSIEI 486
>gi|327365322|ref|NP_001192160.1| splicing factor U2AF 65 kDa subunit isoform 1 [Mus musculus]
gi|348551789|ref|XP_003461711.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 2 [Cavia
porcellus]
gi|392343893|ref|XP_003748811.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Rattus norvegicus]
gi|136628|sp|P26369.3|U2AF2_MOUSE RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|55101|emb|CAA45874.1| splicing factor U2AF [Mus musculus]
gi|26347321|dbj|BAC37309.1| unnamed protein product [Mus musculus]
Length = 475
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 174/358 (48%), Gaps = 33/358 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLT----------AVQAVLDGSIMDNSGNPPFH 665
AF EYVD VT +AIAGLNG+++G + L A L +I
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQVP 361
Query: 666 GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 GLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 417
>gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae]
Length = 488
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 41/345 (11%)
Query: 384 RSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
R P KK WDV P ++ + + QA+ + V S P+ G SV+
Sbjct: 122 REP-KKYRFWDVPPTGFENITPMEYKNMQASGAVPRGSVQS-------AVPVVGPSVTC- 172
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
QS RRL V N+P +E+A+++F N + + G+ P +
Sbjct: 173 --------------QS----RRLYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPGN-PIL 213
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
C I +K AF+EF + ++ +A + DG +F G LK++RP+++ + + +
Sbjct: 214 LCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY---QPSQNTFDMNAR 270
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEPCAFIEYV 622
VS IV DS +KIFIGG+ L+ V E++C+FGPLKA+ V+ + + + AF EY+
Sbjct: 271 MPVSSIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYL 330
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNP----PFHGIPKHALPLLKKP 678
D +T +AIAGLNG+++G + L VQ N+ P GI +
Sbjct: 331 DPTLTDQAIAGLNGMQLGDKQLV-VQLACANQTRHNTHLPNSASAIAGIDLSQGA--GRA 387
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
TE+L L N+ + S+ + EE+LEDVR EC+++G V+S+ +
Sbjct: 388 TEILCLMNMVTEDELR--SDEDYEEILEDVREECSKYGIVRSLEI 430
>gi|268575804|ref|XP_002642882.1| C. briggsae CBR-UAF-1 protein [Caenorhabditis briggsae]
gi|60415989|sp|P90727.2|U2AF2_CAEBR RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
Length = 488
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 41/345 (11%)
Query: 384 RSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
R P KK WDV P ++ + + QA+ + V S P+ G SV+
Sbjct: 122 REP-KKYRFWDVPPTGFENITPMEYKNMQASGAVPRGSVQS-------AVPVVGPSVTC- 172
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
QS RRL V N+P +E+A+++F N + + G+ P +
Sbjct: 173 --------------QS----RRLYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPGN-PIL 213
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
C I +K AF+EF + ++ +A + DG +F G LK++RP+++ + + +
Sbjct: 214 LCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY---QPSQNTFDMNAR 270
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEPCAFIEYV 622
VS IV DS +KIFIGG+ L+ V E++C+FGPLKA+ V+ + + + AF EY+
Sbjct: 271 MPVSSIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYL 330
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNP----PFHGIPKHALPLLKKP 678
D +T +AIAGLNG+++G + L VQ N+ P GI +
Sbjct: 331 DPTLTDQAIAGLNGMQLGDKQLV-VQLACANQTRHNTHLPNSASAIAGIDLSQGA--GRA 387
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
TE+L L N+ + S+ + EE+LEDVR EC+++G V+S+ +
Sbjct: 388 TEILCLMNMVTEDELR--SDEDYEEILEDVREECSKYGIVRSLEI 430
>gi|410982179|ref|XP_003997437.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Felis catus]
Length = 471
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 92 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 135
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 194
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 254
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT
Sbjct: 255 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTD 314
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + + + P G+ + + PTEVL
Sbjct: 315 QAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVL 374
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 375 CLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 413
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 183/367 (49%), Gaps = 47/367 (12%)
Query: 382 INRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVS 441
+ R E+ + WD+ P+ + + + QA+ A +V P T S
Sbjct: 41 VKRRKERVRSSWDIPPLGYEHLTPVRYKAMQASGQIASRIVPDAPPTGE----------S 90
Query: 442 ASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQHVHGSL 500
A++A + R RRL V N+P S +++ +M F N + +G V G+
Sbjct: 91 AAIATVT------------RQARRLYVGNIPFSTTDEDMMAFFNEQINRLNGTNGVDGN- 137
Query: 501 PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVAS------- 553
+ C +K AF+EF + ++A+ A+ DG + G LKI+RP ++ +AS
Sbjct: 138 AVLTCQTNLDKNFAFLEFRSMDEATQAINFDGILYRGQTLKIRRPHDYHPMASVSSSEAA 197
Query: 554 GEAEKSVASVDSV--SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVN 609
A+ S V+SV S +V DSPHKI++GG+ L+ + V E++ FG L+ ++ E
Sbjct: 198 DAAKGSATHVNSVPISPMVPDSPHKIYVGGLPTCLNEEQVKELLVTFGKLRGFNLVKEAV 257
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
+ AF EYVD +T +AIAGLNG+++G + L VQ + G + P +P
Sbjct: 258 TGQSKGFAFCEYVDPCITEQAIAGLNGMQLGDRKLI-VQRSIAGVRNLVANQLPVLQVPG 316
Query: 670 HALPL-LKKPTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNVV 724
+ + K TEVL L N+ P SEL E +++ D++ ECA++G VKS+ +
Sbjct: 317 FPVDVSTGKATEVLCLLNMVLP------SELTDDDEYDDIRTDIKQECAKYGKVKSLKIP 370
Query: 725 KYGDSNI 731
+ GD +I
Sbjct: 371 RPGDDSI 377
>gi|444724150|gb|ELW64768.1| Splicing factor U2AF 65 kDa subunit [Tupaia chinensis]
Length = 447
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 68 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 111
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 112 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 170
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 171 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 230
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT
Sbjct: 231 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTD 290
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + + + P G+ + + PTEVL
Sbjct: 291 QAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVL 350
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 351 CLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 389
>gi|194756144|ref|XP_001960339.1| GF13310 [Drosophila ananassae]
gi|190621637|gb|EDV37161.1| GF13310 [Drosophila ananassae]
Length = 434
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 180/365 (49%), Gaps = 52/365 (14%)
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
+ WDV P + YS + + AS + D Q+P A
Sbjct: 46 ATSWDVPP-DGYSHLTPLQYKAMQASGQIASRIVPD------QQPTA------------- 85
Query: 450 SMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG-SLPCIGCVIQ 508
+S + R RRL V N+P +E+ +M F N L++ G + + C
Sbjct: 86 --ESAAIAMVTRQARRLYVGNIPFGVTEEEMMGFFNQQLIALGSSSLKTDGKAVLTCQTN 143
Query: 509 REKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVAS------GEAEKSVAS 562
EK AF+EF + ++A+ A+ DG F G LKI+RP ++ VAS G A ++ S
Sbjct: 144 LEKNFAFLEFRSMDEATQAINFDGIVFRGQTLKIRRPHDYHPVASISCSEPGFATTTMTS 203
Query: 563 ---VDSVSG-------IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNE 610
V S +G +V DSP KI+IGG+ L+ + E++ +FG LK ++ + N
Sbjct: 204 PQIVVSTTGPNHVISTLVPDSPQKIYIGGLPTCLNETQIKELLLSFGQLKGFNLVKDANT 263
Query: 611 DHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIP 668
+ AF EYVD LVT +AIAGLNG+++G + L +++ G NSG P +P
Sbjct: 264 SLSKGFAFFEYVDPLVTEQAIAGLNGMQLGDRKLVVQRSIAGGR---NSGGVPATVLQVP 320
Query: 669 K-HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV---V 724
A+P + PTEVL L N+ PE L + E E++ D++ ECA++G V+S+ + +
Sbjct: 321 GLTAIPNTESPTEVLCLLNMVLPE--ELLDDEEYEDIRTDIQQECAKYGDVRSLKIPRPI 378
Query: 725 KYGDS 729
GDS
Sbjct: 379 PKGDS 383
>gi|327280715|ref|XP_003225097.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 456
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 77 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 120
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 179
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 239
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT
Sbjct: 240 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTD 299
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + + + P G+ + + PTEVL
Sbjct: 300 QAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVL 359
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 360 CLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGVVKSIEI 398
>gi|348526426|ref|XP_003450720.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 487
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 188/390 (48%), Gaps = 38/390 (9%)
Query: 353 RRHDGSTSGLGGYSPRKRRTEAAAKTPSP----INRSPEKKSAK-----WDVAPVETYSV 403
RRH + + Y ++++ + SP + RSP ++ K WDV P +
Sbjct: 59 RRHRRRSVPVCNYIWASKQSKLLLRQESPHYTGMYRSPHREKKKKVKKYWDVPPPGFEHI 118
Query: 404 PSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQL--TQSNR 461
+ + QAA Q P + + + L V+ V + +Q R
Sbjct: 119 TPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPTPVPVVGSQMTR 162
Query: 462 PMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTA 521
RRL V N+P +E+++M+F N + G+ G+ P + I ++K AF+EF +
Sbjct: 163 QARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSV 221
Query: 522 EDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
++ + A+ DG F G LKI+RP ++ + SV VS +V DS HK+FIGG
Sbjct: 222 DETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGG 281
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
+ L+ V E++ +FGPLKA++ + + AF EYVD + +AIAGLNG+++
Sbjct: 282 LPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQL 341
Query: 640 GGQVLTAVQAVLD------GSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGF 693
G + L +A + SI G+ + PTEVL L N+ PE
Sbjct: 342 GDKKLLVQRASVGSKNATLSSINQTPVTLQVPGLNSSVTQMGGLPTEVLCLMNMVAPE-- 399
Query: 694 SSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L + E EE++EDVR EC+++G VKS+ +
Sbjct: 400 ELLDDEEYEEIVEDVRDECSKYGQVKSIEI 429
>gi|417410850|gb|JAA51891.1| Putative splicing factor u2af large subunit rrm superfamily,
partial [Desmodus rotundus]
Length = 455
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 76 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 119
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 120 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 178
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 179 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 238
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT
Sbjct: 239 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTD 298
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPP----FHGIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + + + P G+ + + PTEVL
Sbjct: 299 QAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVL 358
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 359 CLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 397
>gi|115496604|ref|NP_001068804.1| splicing factor U2AF 65 kDa subunit [Bos taurus]
gi|89994093|gb|AAI14161.1| U2 small nuclear RNA auxiliary factor 2 [Bos taurus]
gi|296477253|tpg|DAA19368.1| TPA: U2 (RNU2) small nuclear RNA auxiliary factor 2 [Bos taurus]
Length = 475
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 175/358 (48%), Gaps = 33/358 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG------SIMDNSGNPPFH---- 665
AF EYVD VT +AIAGLNG+++G + L +A + S + P
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPLSTINQTPVTLQVP 361
Query: 666 GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 362 GLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECGKYGLVKSIEI 417
>gi|410903109|ref|XP_003965036.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 4
[Takifugu rubripes]
Length = 455
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 157/287 (54%), Gaps = 28/287 (9%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+++ EF N + +G+ + P + I ++K AF+
Sbjct: 120 SQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSN-PVLAVQINQDKNFAFL 178
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-VSGIVKDSPH 575
EF + ++ + A+ DG F G LKI+RP ++ + G +E+ V V VS +V DSPH
Sbjct: 179 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPL-PGISEQPVFHVPGVVSTVVPDSPH 237
Query: 576 KIFIGGISRTLSSKMVM---------EIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQ 624
K+FIGG+ L+ V+ E++ +FGPLKA++ + + AF EYVD
Sbjct: 238 KLFIGGLPNYLNDDQVLIRRLGWRVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDV 297
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKHALPLLKK----- 677
T +A+AGLNG+++G + L +A S+ + NP +P L++
Sbjct: 298 SATDQAVAGLNGMQLGDKKLIVQRA----SVGAKNANPSAIIEAPVTLQVPGLQRLQNSG 353
Query: 678 -PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE + + + EE+LEDVR EC ++GSV+S+ +
Sbjct: 354 MPTEVLCLLNMVMPEEL--VDDDDYEEILEDVREECCKYGSVRSIEI 398
>gi|432908699|ref|XP_004077990.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oryzias latipes]
Length = 479
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 177/356 (49%), Gaps = 34/356 (9%)
Query: 383 NRSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAG 437
+RSP ++ K WDV P + + + QAA Q P
Sbjct: 85 SRSPHREKKKKIKKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATA 128
Query: 438 ISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQH 495
+ + + L V+ V + +Q R RRL V N+P +E+++M+F N + G+
Sbjct: 129 LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQ 188
Query: 496 VHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE 555
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 189 APGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMS 247
Query: 556 AEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHE 613
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ +
Sbjct: 248 ENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLS 307
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIP-- 668
+ AF EYVD + +AIAGLNG+++G + L +A + + ++ + P +P
Sbjct: 308 KGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGL 367
Query: 669 -KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PTEVL L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 368 NSSVTQMGGLPTEVLCLMNMVAPE--ELLDDEEYEEIVEDVREECGKYGQVKSIEI 421
>gi|195429288|ref|XP_002062695.1| GK19586 [Drosophila willistoni]
gi|194158780|gb|EDW73681.1| GK19586 [Drosophila willistoni]
Length = 466
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 171/375 (45%), Gaps = 48/375 (12%)
Query: 368 RKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPV 427
R RR+ AAK+ + ++ + WD AP+ + + + QA+ A +V
Sbjct: 63 RPRRSLTAAKS---LVGKKQRAPSSWDKAPLGYEHLTPVQYKAMQASGQIASRIVPD--- 116
Query: 428 TSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNF 487
+ +S L R RRL V N+P ++K +M F N
Sbjct: 117 -------------------ILPEAESPALAMVTRQARRLYVGNIPFGVTDKEMMNFFNVQ 157
Query: 488 LLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKE 547
L S G++ H P + C EK AF+EF + + + A+ DG +F G LKI+RP +
Sbjct: 158 LQSLGLKQFHDGTPVLTCQTNLEKNFAFLEFRSMGETTQAIAFDGVNFRGQTLKIRRPHD 217
Query: 548 FVEVAS-------GEAEKSVASV-------DSVSGIVKDSPHKIFIGGISRTLSSKMVME 593
+ V S G ++ V S D VS +V DSP KI+IG + L + E
Sbjct: 218 YHPVTSLSSLETVGLSDTIVTSAHTPVPMKDLVSTLVPDSPQKIYIGSLPPCLDEAQIKE 277
Query: 594 IVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL 651
++ +FG L+ ++ + N + AF EYVD VT +AIAGLNG+ +G + L +++
Sbjct: 278 LLLSFGRLRGFNLVKDANTGMSKGYAFFEYVDSAVTEQAIAGLNGMLLGDRRLVVQRSIA 337
Query: 652 DGSIMDNSGNPPFHGIPKHALPLL---KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDV 708
G N +P P + TE+L L N+ PE L + E E++ D+
Sbjct: 338 GGRNASNHSPASVLQVP--GFPSVFSTGAATEILCLLNMVQPEDL--LDDEEYEDICVDI 393
Query: 709 RLECARFGSVKSVNV 723
+ EC + G VK + +
Sbjct: 394 KQECDKHGKVKGLKI 408
>gi|390479436|ref|XP_002762565.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Callithrix jacchus]
Length = 453
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 151/275 (54%), Gaps = 11/275 (4%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+
Sbjct: 127 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFL 185
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V DS HK
Sbjct: 186 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHK 245
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 634
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 246 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 305
Query: 635 NGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVF 688
NG+++G + L +A + + + P G+ + + PTEVL L N+
Sbjct: 306 NGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMV 365
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 366 LPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 398
>gi|355756173|gb|EHH59920.1| hypothetical protein EGM_10153, partial [Macaca fascicularis]
Length = 442
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 182/376 (48%), Gaps = 37/376 (9%)
Query: 365 YSPRKR--RTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMV 422
Y P R + E SP + +K WDV P + + + QAA
Sbjct: 49 YKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG------- 101
Query: 423 SSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKAL 480
Q P + + + L V+ V + +Q R RRL V N+P +E+A+
Sbjct: 102 ---------QIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAM 152
Query: 481 MEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSIL 540
M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F G L
Sbjct: 153 MDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSL 211
Query: 541 KIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGP 600
KI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++ +FGP
Sbjct: 212 KIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGP 271
Query: 601 LKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN 658
LKA++ + + AF EYVD VT +AIAGLNG+++G + L VQ G+
Sbjct: 272 LKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNAT 330
Query: 659 SGNPP-----------FHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
+PP G+ + + PTEVL L N+ PE L + E EE++ED
Sbjct: 331 LVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVED 388
Query: 708 VRLECARFGSVKSVNV 723
VR EC+++G VKS+ +
Sbjct: 389 VRDECSKYGLVKSIEI 404
>gi|71480064|ref|NP_001025127.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
gi|68533572|gb|AAH98548.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
Length = 465
Score = 142 bits (359), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 171/348 (49%), Gaps = 42/348 (12%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 85 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPEGLAVTPT 128
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+++M+F N + G+ G+ P + I ++
Sbjct: 129 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 187
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 188 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 247
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD ++
Sbjct: 248 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNISD 307
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK----------- 677
+AIAGLNG+++G + L +A + S N GI + + L
Sbjct: 308 QAIAGLNGMQLGDKKLLVQRASV------GSKNTTLTGINQTPVTLQVPGLMNSSVNQMG 361
Query: 678 --PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 GIPTEVLCLMNMVAPE--ELLDDEEYEEIVEDVRDECSKYGQVKSIEI 407
>gi|297277970|ref|XP_001091568.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Macaca mulatta]
Length = 471
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 178/362 (49%), Gaps = 40/362 (11%)
Query: 382 INRSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLA 436
+ RSP + K WDV P + + + QAA Q P
Sbjct: 72 LIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPAT 115
Query: 437 GISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ 494
+ + + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 116 ALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLT 175
Query: 495 HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASG 554
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 176 QAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM 234
Query: 555 EAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDH 612
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ +
Sbjct: 235 SENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL 294
Query: 613 EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--------- 663
+ AF EYVD VT +AIAGLNG+++G + L VQ G+ +PP
Sbjct: 295 SKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNATLVSPPSTINQTPVT 353
Query: 664 --FHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
G+ + + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+
Sbjct: 354 LQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSI 411
Query: 722 NV 723
+
Sbjct: 412 EI 413
>gi|355703931|gb|EHH30422.1| hypothetical protein EGK_11092, partial [Macaca mulatta]
Length = 453
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 182/376 (48%), Gaps = 37/376 (9%)
Query: 365 YSPRKR--RTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMV 422
Y P R + E SP + +K WDV P + + + QAA
Sbjct: 49 YKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG------- 101
Query: 423 SSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKAL 480
Q P + + + L V+ V + +Q R RRL V N+P +E+A+
Sbjct: 102 ---------QIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAM 152
Query: 481 MEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSIL 540
M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F G L
Sbjct: 153 MDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSL 211
Query: 541 KIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGP 600
KI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++ +FGP
Sbjct: 212 KIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGP 271
Query: 601 LKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN 658
LKA++ + + AF EYVD VT +AIAGLNG+++G + L VQ G+
Sbjct: 272 LKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNAT 330
Query: 659 SGNPP-----------FHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
+PP G+ + + PTEVL L N+ PE L + E EE++ED
Sbjct: 331 LVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVED 388
Query: 708 VRLECARFGSVKSVNV 723
VR EC+++G VKS+ +
Sbjct: 389 VRDECSKYGLVKSIEI 404
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 152/266 (57%), Gaps = 16/266 (6%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P SE A+++F N + G+ G+ P + C + +K AF+EF + ++
Sbjct: 210 RRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQAPGN-PVLACQMNLDKNFAFIEFRSIDE 268
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
+A + DG +F G LKI+RP+++ +++ ++ VS IV DSP+KIFIGG+
Sbjct: 269 TTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDMGNMM----VSNIVADSPYKIFIGGLP 324
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
L+++ V E++ +FG LKA++ +V+ + AF EY+D +T +AIAGLNG+++G
Sbjct: 325 SYLNAEQVKELLSSFGQLKAFNLVTDVSTGVSKGYAFAEYLDPSLTDQAIAGLNGMQLGD 384
Query: 642 QVLTAVQAVLDG-SIMDNSGNPPFH--GI-PKHALPLLKKPTEVLKLKNVFNPEGFSSLS 697
+ L + + + M + P GI H PTEVL L N+ E
Sbjct: 385 KNLVVQLSCANARAAMSTTAFPQIQVAGIDLSHG---AGPPTEVLCLMNMVTEE--ELKE 439
Query: 698 ELEVEEVLEDVRLECARFGSVKSVNV 723
+ E E++LED+R ECA++G VKS+ V
Sbjct: 440 DEEYEDILEDIREECAKYGFVKSIEV 465
>gi|301782083|ref|XP_002926459.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 496
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 104 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 147
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 148 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 207
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 208 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 266
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 267 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 326
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 327 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 386
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 387 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 438
>gi|63101571|gb|AAH94451.1| U2af2 protein, partial [Mus musculus]
Length = 403
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 11 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 54
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 55 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 114
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 115 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 173
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 174 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 233
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 234 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 293
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 294 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 345
>gi|242019185|ref|XP_002430045.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
gi|212515110|gb|EEB17307.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
Length = 445
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 172/340 (50%), Gaps = 32/340 (9%)
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 75 SLYWDVPPPGFEHITPLQYKAMQAAGQIPANVVADTPQAAV---PVVGSTIT-------- 123
Query: 450 SMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQR 509
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 124 -----------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINL 171
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS--VS 567
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G +E +V + +S
Sbjct: 172 DKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMSENPSVNVPAGVIS 230
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQL 625
+V DSPHKIFIGG+ L+ + E++ +FG L+A++ ++ + AF +VD
Sbjct: 231 TVVPDSPHKIFIGGLPNYLNEDQLKELLMSFGQLRAFNLVMDSTTGLSKGYAFCLFVDIN 290
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFH-GIPK-HALPLLKKPTEVLK 683
VT +AIAGLNG+++G + L +A + P +P ++ + PTEVL
Sbjct: 291 VTDQAIAGLNGMQLGDKKLIVQRASVGAKNTALGQQAPVQIQVPGLTSVGMSGPPTEVLC 350
Query: 684 LKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ P + E E E++LED++ EC + G VKS+ +
Sbjct: 351 LLNMVTPSELN--DEEEYEDILEDIKEECNKHGVVKSLEI 388
>gi|348526424|ref|XP_003450719.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 475
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 176/359 (49%), Gaps = 34/359 (9%)
Query: 380 SPINRSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKP 434
S + RSP ++ K WDV P + + + QAA Q P
Sbjct: 78 SKLLRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAG----------------QIP 121
Query: 435 LAGISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG 492
+ + + L V+ V + +Q R RRL V N+P +E+++M+F N + G
Sbjct: 122 ATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGG 181
Query: 493 VQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA 552
+ G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 182 LTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLP 240
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNE 610
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ +
Sbjct: 241 GMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSAT 300
Query: 611 DHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD------GSIMDNSGNPPF 664
+ AF EYVD + +AIAGLNG+++G + L +A + SI
Sbjct: 301 GLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLSSINQTPVTLQV 360
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 361 PGLNSSVTQMGGLPTEVLCLMNMVAPE--ELLDDEEYEEIVEDVRDECSKYGQVKSIEI 417
>gi|432908697|ref|XP_004077989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oryzias latipes]
Length = 474
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 176/355 (49%), Gaps = 34/355 (9%)
Query: 384 RSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
RSP ++ K WDV P + + + QAA Q P +
Sbjct: 81 RSPHREKKKKIKKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATAL 124
Query: 439 SVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
+ + L V+ V + +Q R RRL V N+P +E+++M+F N + G+
Sbjct: 125 LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA 184
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 185 PGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE 243
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEE 614
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 244 NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 303
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIP--- 668
AF EYVD + +AIAGLNG+++G + L +A + + ++ + P +P
Sbjct: 304 GYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLN 363
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PTEVL L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 364 SSVTQMGGLPTEVLCLMNMVAPE--ELLDDEEYEEIVEDVREECGKYGQVKSIEI 416
>gi|440900150|gb|ELR51345.1| Splicing factor U2AF 65 kDa subunit, partial [Bos grunniens mutus]
Length = 411
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 18 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 61
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 62 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 121
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 122 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 180
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 181 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 240
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 241 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 300
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 301 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECGKYGLVKSIEI 352
>gi|195999450|ref|XP_002109593.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
gi|190587717|gb|EDV27759.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
Length = 476
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 177/348 (50%), Gaps = 31/348 (8%)
Query: 386 PEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
P+K S WDV P +V + ++ E+ V + AG+ + + A
Sbjct: 93 PKKPSPYWDVPPAGYETV----------SPADYKELQRDGKVPAQGVPAAAGLGIDPTAA 142
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S Q R RRL V N+P +E+A+M+F N ++++G+ +G P +
Sbjct: 143 PGSGS-------QITRQSRRLYVGNIPFGITEQAMMDFFNEKMVTTGLTQANGD-PVLAV 194
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS--VASV 563
I +K AF+EF + E+ + A+ DG F LKI+RPK++ + +G+ S +
Sbjct: 195 QINFDKNFAFLEFRSIEETTNAMAFDGIMFQNQALKIRRPKDY-QPPTGDPNSSANIHVP 253
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
+S +V D+PHK+FIGG+ L+ V E++ +FG LKA++ + + AF EY
Sbjct: 254 GVISTVVPDTPHKLFIGGLPNYLTEDQVKELLQSFGELKAFNLVKDSATGLSKGYAFCEY 313
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG----SIMDNSGNPPFHGIPKHALP--LL 675
V VT +AIAGLN +++G + L +A + S+ SG P +P + L
Sbjct: 314 VVVEVTDQAIAGLNNMQLGEKKLVVQRASVGAKHNYSVRCLSGIPVTVQVPGLQISNNAL 373
Query: 676 KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ TE+L+L N+ E + + E E+++EDVR E ++ VKS+ +
Sbjct: 374 GEVTEILQLMNMVTEEEL--VDDEEYEDIIEDVRAEVSKIAPVKSLEI 419
>gi|383854116|ref|XP_003702568.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Megachile
rotundata]
Length = 432
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 172/335 (51%), Gaps = 33/335 (9%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 70 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT----------- 115
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I +K
Sbjct: 116 --------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINLDKN 166
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A+ DG +F G LKI+RP ++ + S+ +V G V D
Sbjct: 167 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSM----NVPGTVPD 222
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
SPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD +T +A
Sbjct: 223 SPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQA 282
Query: 631 IAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVF 688
IAGLNG+++G + L +A + + M + P +P ++ P TEVL L N+
Sbjct: 283 IAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMV 342
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + E E E++LED++ EC ++G V+SV +
Sbjct: 343 TPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 375
>gi|340715832|ref|XP_003396412.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Bombus
terrestris]
gi|350417884|ref|XP_003491627.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Bombus impatiens]
Length = 432
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 172/335 (51%), Gaps = 33/335 (9%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 70 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT----------- 115
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I +K
Sbjct: 116 --------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINLDKN 166
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A+ DG +F G LKI+RP ++ + S+ +V G V D
Sbjct: 167 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSM----NVPGTVPD 222
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
SPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD +T +A
Sbjct: 223 SPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQA 282
Query: 631 IAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVF 688
IAGLNG+++G + L +A + + M + P +P ++ P TEVL L N+
Sbjct: 283 IAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMV 342
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + E E E++LED++ EC ++G V+SV +
Sbjct: 343 TPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 375
>gi|345480698|ref|XP_001604333.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Nasonia
vitripennis]
Length = 455
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 51/348 (14%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 90 KLSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 140
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 141 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 186
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVS 567
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + D+ S
Sbjct: 187 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY--------QPMPGMTDNPS 238
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQL 625
V DSPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD
Sbjct: 239 MNVPDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVS 298
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNP-PFHG------IPKHALPLL--- 675
+T +AIAGLNG+++G + L +A + + NP P G I L ++
Sbjct: 299 MTDQAIAGLNGMQLGDKKLIVQRASV------GAKNPMPMIGAQAPVQIQVPGLSMVGTS 352
Query: 676 KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE + E E E++LED++ EC ++G V+SV +
Sbjct: 353 GPPTEVLCLLNMVTPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 398
>gi|307176032|gb|EFN65791.1| Splicing factor U2AF 50 kDa subunit [Camponotus floridanus]
Length = 432
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 171/335 (51%), Gaps = 33/335 (9%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 70 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT----------- 115
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I +K
Sbjct: 116 --------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINLDKN 166
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A+ DG +F G LKI+RP ++ + S+ +V G V D
Sbjct: 167 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSM----NVPGTVPD 222
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
SPHKIFIGG+ L+ V E++ +FG L+A++ + + AF EYVD +T +A
Sbjct: 223 SPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQA 282
Query: 631 IAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVF 688
IAGLNG+++G + L +A + + M + P +P ++ P TEVL L N+
Sbjct: 283 IAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMV 342
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + E E E++LED++ EC ++G V+SV +
Sbjct: 343 TPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 375
>gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 171/341 (50%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 79 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 122
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+++M+F N + G+ G+ P + I ++
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 181
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 241
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD +
Sbjct: 242 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLND 301
Query: 629 KAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIP---KHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + + ++ + P +P + PTEVL
Sbjct: 302 QAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQVPGLNSSVTQMGGVPTEVL 361
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 CLMNMVAPE--ELLDDEEYEEIVEDVRDECSKYGQVKSIEI 400
>gi|348526428|ref|XP_003450721.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 458
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 168/341 (49%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 79 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 122
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+++M+F N + G+ G+ P + I ++
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 181
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 241
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD +
Sbjct: 242 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLND 301
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLD------GSIMDNSGNPPFHGIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A + SI G+ + PTEVL
Sbjct: 302 QAIAGLNGMQLGDKKLLVQRASVGSKNATLSSINQTPVTLQVPGLNSSVTQMGGLPTEVL 361
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 CLMNMVAPE--ELLDDEEYEEIVEDVRDECSKYGQVKSIEI 400
>gi|410905623|ref|XP_003966291.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Takifugu
rubripes]
Length = 458
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 166/341 (48%), Gaps = 29/341 (8%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 79 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 122
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+++M+F N + G+ G+ P + I ++
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 181
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 241
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD +
Sbjct: 242 PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLND 301
Query: 629 KAIAGLNGLKVGGQVLTAVQA------VLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVL 682
+AIAGLNG+++G + L +A SI G+ + PTEVL
Sbjct: 302 QAIAGLNGMQLGDKKLLVQRASXXXXXSFQTSINQTPVTLQVPGLNSSVTQMGGVPTEVL 361
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 362 CLMNMVAPE--ELLDDEEYEEIVEDVRDECGKYGQVKSIEI 400
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 175/364 (48%), Gaps = 48/364 (13%)
Query: 382 INRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVS 441
+ R + WDV P E Y + + AS + D + + S
Sbjct: 45 LQRRLGRAPTSWDVPP-EGYGQLTPLQYKAMQASGQIASRIVPDAMPTGE---------S 94
Query: 442 ASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLS---SGVQHVHG 498
A++A + R RRL V N+P +E+ +M+F N LL+ +G Q++ G
Sbjct: 95 AAIAMIT------------RQARRLYVGNIPFGVTEEEMMKFFNQQLLALGLAGAQYMDG 142
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEVAS 553
+ C EK AF+EF + ++A+ AL DG F G +LKI+RP ++ + V++
Sbjct: 143 KA-VLTCQTNLEKNFAFLEFRSMDEATQALNFDGILFRGQVLKIRRPHDYQPVPSIRVSA 201
Query: 554 GEAEKSVASVDS-----------VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLK 602
E+ +S D+ +S IV DSP+KIF+GG+ L + +++ +FG LK
Sbjct: 202 MESYRSFRLPDNTVTHPPLATIPLSSIVPDSPNKIFVGGLPTCLGQDQIRDLLQSFGELK 261
Query: 603 AYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG 660
+ + N + AF EY D VT AIAGL+G+++G + L VQ + G SG
Sbjct: 262 RLNLVKDTNTCLSKGFAFFEYFDPTVTDHAIAGLHGMQLGNRRLV-VQRSIPGGKHAVSG 320
Query: 661 NPPFHGIPKHALPL-LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVK 719
P +P + L PTE++ L N+ PE L E E++ D+ ECA++G V+
Sbjct: 321 QQPLVQVPGISTLLDPGSPTEIICLLNMVLPE--ELLDNEEFEDIRTDIEQECAKYGEVR 378
Query: 720 SVNV 723
S+ +
Sbjct: 379 SIKI 382
>gi|293336129|ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea mays]
gi|224032879|gb|ACN35515.1| unknown [Zea mays]
Length = 331
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 172/353 (48%), Gaps = 44/353 (12%)
Query: 637 LKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSL 696
+ +GG+VLTAV + + + PF+GIP +A LLK+PT+VL+LKNVF E + L
Sbjct: 1 MMLGGRVLTAVHVFPNPHVEAANEASPFYGIPDNAKLLLKEPTKVLQLKNVFEREEYMLL 60
Query: 697 SELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDE 756
S+ E+EE LEDVR+EC RFG+VKSVNVV+Y + +S + EN + +D
Sbjct: 61 SKSELEETLEDVRVECTRFGAVKSVNVVEYPAAGVSAAE-----ENIVELKIECTEFSDT 115
Query: 757 TNEKGERLEEVTDHKSIKNNELEILN-----DSKEVMEAGEVNNVKDNRPASGTMGDEPS 811
N + V+++ +++LN D+K+V E + KD S +
Sbjct: 116 EN----IAKAVSEYSVPIIPSIDVLNHSVASDTKDVDLIPESQDQKDKHLPSN------A 165
Query: 812 QLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKS 871
LCE + +A E D T + P ++K T ++ +
Sbjct: 166 ALCESEAPVADEDAELDETQSRAALPTPQHAEADHTEAAVDENKHTGAGKV-------TA 218
Query: 872 SAKEDLNLEEVNGN---SEAFT-----------GASNEMGMQSSAVENGDNENQ---DPN 914
+A +D +E+ +G+ SE G +E G + + E Q +
Sbjct: 219 TATDDDAVEKSHGDPRTSETCNPAGPTDKAEKPGRYSEQGAGDVTEDRPEKEAQAVGTSD 278
Query: 915 QGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
G +FEPG V VE++R EA+CMAAHSLH R F +R V Y P +LY ++ +
Sbjct: 279 TGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 331
>gi|291190480|ref|NP_001167275.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
gi|223648990|gb|ACN11253.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
Length = 474
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 151/277 (54%), Gaps = 14/277 (5%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+
Sbjct: 144 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMCLGGLTQAPGN-PVLAVQINQDKNFAFL 202
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V DS HK
Sbjct: 203 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSESPSVYVPGVVSTVVPDSAHK 262
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 634
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD + +AIAGL
Sbjct: 263 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATALSKGYAFCEYVDVNLNDQAIAGL 322
Query: 635 NGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIPKHALP-----LLKKPTEVLKLKN 686
NG+++G + L +A + + ++ + P +P +P L PTEVL L N
Sbjct: 323 NGMQLGDKKLLVQRASVGAKNAALTGMNQTPVTLQVPG-LMPTSMASLGGLPTEVLCLMN 381
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ E L + E EE++EDVR EC ++G VKS+ +
Sbjct: 382 MVAVE--ELLDDEEYEEIVEDVRDECGKYGQVKSIEI 416
>gi|291241059|ref|XP_002740425.1| PREDICTED: U2 (RNU2) small nuclear RNA auxiliary factor 2-like
[Saccoglossus kowalevskii]
Length = 466
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 173/362 (47%), Gaps = 39/362 (10%)
Query: 380 SPINRSPEKKSAK----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPL 435
+P +RS K K WD+ P + + + Q A Q P
Sbjct: 69 TPPSRSARPKRKKPFMYWDIPPPGFEHIAPLQYKAMQGAG----------------QIPQ 112
Query: 436 AGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQH 495
+ + A N +M V +Q R RRL V N+P +E+A+M+F N + S +
Sbjct: 113 TALENQMAQAAANSNMPIVG-SQMTRQARRLYVGNIPFGVTEEAMMDFFNRQMKSFRITQ 171
Query: 496 VHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE 555
G+ P + I K AF+EF + ++ + A+ DG F G LKI+RPK++ V
Sbjct: 172 AQGN-PVLAVQIDLNKNFAFLEFRSVDETTQAMAFDGILFQGQSLKIRRPKDYQPVPGMA 230
Query: 556 AEKSVASVDS-------VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF-- 606
SV D VS +V DSPHKIFIGG+ L+ V E++ +FG LKA++
Sbjct: 231 EMPSVHVPDYLFSPTGVVSTVVPDSPHKIFIGGLPNYLNEDQVKELLTSFGELKAFNLVK 290
Query: 607 EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-----SIMDNSGN 661
+ + AF EY+D+ +T +AIAGLNG+++G + L +A + + M N
Sbjct: 291 DSATSLSKGYAFCEYIDEKITDQAIAGLNGMQLGDKKLIVQRASVGAKNAQTAQMIAQLN 350
Query: 662 PPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
G+ L+ TEVL L N+ P+ E EE+L+DVR EC ++G V+S+
Sbjct: 351 IQVPGV-NIGQGLVGPTTEVLCLMNMVTPDELQDEE--EYEEILDDVRQECGKYGQVRSL 407
Query: 722 NV 723
+
Sbjct: 408 EI 409
>gi|443924699|gb|ELU43686.1| rRNA primary transcript binding protein [Rhizoctonia solani AG-1
IA]
Length = 678
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 158/316 (50%), Gaps = 26/316 (8%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+ A+E L EF N ++ + G P IG I EK AFVEF +AED
Sbjct: 236 RRLYVGNITYEANENNLQEFFNRKMVEMKIGTGGGGDPVIGVQINHEKSYAFVEFRSAED 295
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A+AA+ DG F LKI+RPK++ + A V VS V DS +KIF+GG+
Sbjct: 296 ATAAMAFDGIMFQSGPLKIRRPKDYTG-SDLSAPMGVHVPGVVSTNVPDSINKIFVGGLP 354
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF---EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVG 640
L VME++ +FG LKA++ N C YVD VT AI GLNG+++G
Sbjct: 355 TYLDENQVMELLKSFGELKAFNLVRENGNGAFRRDCQV--YVDPSVTDIAIQGLNGMELG 412
Query: 641 GQVLTAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLKK----PTE--VLKLKNVFNPE 691
+ L VQ G+ G PP IP+ +P+ + P++ +L L N+ PE
Sbjct: 413 DRFLV-VQRASVGAKSGIPGVPPELFAPAIPRPIMPITETADPNPSDSTILLLLNMVAPE 471
Query: 692 GFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYG-------DSNISTIQACEGNENTA 744
+ + E E++EDVR EC++FG V+S+ + + D+N + G A
Sbjct: 472 DLT--DDGEYTEIVEDVREECSKFGPVRSLAIPRPAKKEKSKWDANAGAL-VTAGGAVLA 528
Query: 745 SAGVGQNLTNDETNEK 760
VG + +T+E+
Sbjct: 529 PGAVGATAGDGKTDEQ 544
>gi|339243511|ref|XP_003377681.1| splicing factor U2AFsubunit [Trichinella spiralis]
gi|316973494|gb|EFV57074.1| splicing factor U2AFsubunit [Trichinella spiralis]
Length = 402
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 157/270 (58%), Gaps = 22/270 (8%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+M+F N + G+ G+ P + C I +K AF+EF + +
Sbjct: 88 RRLYVGNIPFGCTEEAMMDFFNQQMHLCGLAQALGN-PILACQINLDKNFAFIEFRSIAE 146
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
+AA+ DG ++ G LKI+RP+++ + G+ + ++A + VS +V DSP+K+FIGG+
Sbjct: 147 TTAAMAFDGINYQGQSLKIRRPRDY-QPLPGQND-TLAGL--VSSVVADSPYKLFIGGLP 202
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF------EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGL 637
LS + V E++ +FG LKA++ ++++ + AF EY D +T +AIAGLNG+
Sbjct: 203 NYLSEEQVKELLISFGQLKAFNLIKDPATQISKGY----AFAEYSDSTLTDQAIAGLNGM 258
Query: 638 KVGGQVLTAVQAVLDGSI--MDNSGNPPFHGIPKHAL--PLLKKPTEVLKLKNVFNPEGF 693
++G + L VQ G+ M ++ P +P + P TE+L L N+ E
Sbjct: 259 QLGDKKLV-VQLASVGAKNNMFSAAAPVAIQVPGMNVVNPAATPATEILCLMNMVVAE-- 315
Query: 694 SSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ E ++++ED++ EC ++GSVKSV +
Sbjct: 316 ELVDNEEYDDIVEDIKEECCKYGSVKSVEI 345
>gi|66520699|ref|XP_623055.1| PREDICTED: splicing factor U2AF 50 kDa subunit [Apis mellifera]
Length = 432
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 33/338 (9%)
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 67 SLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT-------- 115
Query: 450 SMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQR 509
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 116 -----------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINL 163
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI 569
+K AF+EF + ++ + A+ D +F G LKI+RP ++ + S+ +V G
Sbjct: 164 DKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDYQPMPGMTDNPSM----NVPGT 219
Query: 570 VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVT 627
V DSPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD +T
Sbjct: 220 VPDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMT 279
Query: 628 PKAIAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLK 685
+AIAGLNG+++G + L +A + + M + P +P ++ P TEVL L
Sbjct: 280 DQAIAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLL 339
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ PE + E E E++LED++ EC ++G V+SV +
Sbjct: 340 NMVTPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 375
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 142/276 (51%), Gaps = 18/276 (6%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
R RRL V N+P +E ++EF N + + + G+ P I I E+ AF+E +
Sbjct: 3 RQARRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTAPGN-PVIAAQINTEQNFAFIELRS 61
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIG 580
E+ + A+ DG G LKI+RPK++ + SV VS +V DSPHKIFIG
Sbjct: 62 VEETTQAMAFDGIILQGQALKIRRPKDYQPIPGMSENASVHVPGVVSTVVPDSPHKIFIG 121
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLK 638
G+ L+ V E++ +FG L+A++ + + AF EYVD +T AI GLNG++
Sbjct: 122 GLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQ 181
Query: 639 VGGQVLTAVQAVLDGSIMDNSGNP-PFHGIPKH----------ALPLLKKPTEVLKLKNV 687
+G + L +A + N NP + +P A+P TEVL L N+
Sbjct: 182 LGDKKLIVQRASVGAK--QNLNNPQAMNMVPAQLQIPGLDISMAVPGAVAATEVLALMNM 239
Query: 688 FNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P+ + E EE+ +DVR EC+++G VKS+ +
Sbjct: 240 VTPDELG--DDEEFEEIYDDVREECSKYGRVKSMEI 273
>gi|440633242|gb|ELR03161.1| hypothetical protein GMDG_05987 [Geomyces destructans 20631-21]
Length = 559
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 177/353 (50%), Gaps = 41/353 (11%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + A +++
Sbjct: 174 KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA-----PRQQPMDPSKLQAFMSQ 223
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S+ + L SN R +RL V NLP + SE+ ++EF N L +G+ V GS PC+
Sbjct: 224 PSGSITNAALKPSNSRQAKRLLVHNLPKTLSEEGIVEFFN--LQLNGLNVVEGSDPCLTA 281
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF---SGS-ILKIKRPKEFVEVASGEA--EKS 559
+ ++K A VEF T DA+ AL DG GS L I+RPK+++ A EA E
Sbjct: 282 QVSKDKSFALVEFKTTSDATVALAMDGIGIEENGGSRALSIRRPKDYIVPAVDEAMHEPG 341
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CA 617
V V+ +V D+P+KI I + L+ + V E++ +FG LKA+ + EE A
Sbjct: 342 V-----VTNVVPDTPNKISISNVPPYLTDEQVTELLVSFGELKAFVLAKDSTTEESRGIA 396
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK 677
F EYVD T A+ GLNG+++G + L +A SI G+ +A+ +L
Sbjct: 397 FCEYVDAAATDIAVEGLNGMELGDKHLKVQRA----SIGTTQTAGLEMGV--NAMSMLAG 450
Query: 678 PT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
T VL+L N+ E + + EE+LEDV+ EC ++G V + +
Sbjct: 451 TTTDGLDEGRVLQLLNMVTAEEL--IDNEDYEEILEDVKEECEKYGKVLDIKI 501
>gi|350417886|ref|XP_003491628.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Bombus impatiens]
Length = 428
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 170/335 (50%), Gaps = 37/335 (11%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 70 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT----------- 115
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I +K
Sbjct: 116 --------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINLDKN 166
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A+ DG +F G LKI+RP ++ + D+ S V D
Sbjct: 167 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY--------QPMPGMTDNPSMNVPD 218
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
SPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD +T +A
Sbjct: 219 SPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQA 278
Query: 631 IAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVF 688
IAGLNG+++G + L +A + + M + P +P ++ P TEVL L N+
Sbjct: 279 IAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMV 338
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + E E E++LED++ EC ++G V+SV +
Sbjct: 339 TPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 371
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 144/267 (53%), Gaps = 6/267 (2%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
R RRL V N+P SE+ +M++ N + + G G+ P + C I +K AF+EF
Sbjct: 142 TRQARRLYVGNIPFGCSEEEMMDYFNAQMHACGFSQAPGN-PVLACQINLDKNFAFLEFR 200
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFI 579
+ ++ + A+ DG +F G LKI+RP ++ + SVA +S +V+DSPHKIFI
Sbjct: 201 SIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGMSETPSVAVPGVISTVVQDSPHKIFI 260
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGL 637
GG+ L+ V E++ +FG L+A++ + + AF EYV+ T +AI GLNG+
Sbjct: 261 GGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVEVATTDQAIMGLNGM 320
Query: 638 KVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP-LLKKPTEVLKLKNVFNPEGFSSL 696
++G + L +A + + P +P L PTEVL L N+ PE
Sbjct: 321 QLGDKKLIVQRASVGAKNSQMNQAPVQIQVPGLQLQGGAGPPTEVLCLMNLVCPE--ELK 378
Query: 697 SELEVEEVLEDVRLECARFGSVKSVNV 723
E E E++LED+ EC ++G VKS+ +
Sbjct: 379 DEEEYEDILEDIHEECNKYGVVKSIEI 405
>gi|307195151|gb|EFN77144.1| Splicing factor U2AF 50 kDa subunit [Harpegnathos saltator]
Length = 402
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 170/335 (50%), Gaps = 37/335 (11%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 44 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT----------- 89
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I +K
Sbjct: 90 --------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINLDKN 140
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A+ DG +F G LKI+RP ++ + D+ S V D
Sbjct: 141 FAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY--------QPMPGMTDNPSMNVPD 192
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
SPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD +T +A
Sbjct: 193 SPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQA 252
Query: 631 IAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVF 688
IAGLNG+++G + L +A + + M + P +P ++ P TEVL L N+
Sbjct: 253 IAGLNGMQLGDKKLIVQRASVGAKNPMIGTQAPVQIQVPGLSMVGSSGPATEVLCLLNMV 312
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + E E E++LED++ EC ++G V+SV +
Sbjct: 313 TPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 345
>gi|344277364|ref|XP_003410472.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Loxodonta
africana]
Length = 471
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 33/343 (9%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA ++ ++ + + T LA I V M
Sbjct: 92 WDVPPPGFEHITPMQYKAMQAAG----QIPATAFLPTMTPDGLAMIPTP-------VPMG 140
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+T R RRL V N+P +E+A+M+F N + GV P + I ++K
Sbjct: 141 GSQMT---RKARRLYVGNIPFGITEEAMMDFFN-IQMRLGVLTQAPGNPILAVQINQDKN 196
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
AF+EF + ++ + A DG F G LKI+RP ++ + S S S +V D
Sbjct: 197 FAFLEFRSVDETTQATALDGIIFQGQSLKIRRPHDYQPLPSMSENLSAYMAGVASTVVPD 256
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKA 630
S HK+FI G+ L+ V E++ +FGPLKA+ + + A EYVD T +A
Sbjct: 257 SDHKLFIEGLPTYLNDDQVKELLTSFGPLKAFSLVKDSATGLSKGYAVCEYVDINDTDQA 316
Query: 631 IAGLNGLKVGGQVLTAVQAVLDGSIMDNSG----------NPPFHGIPKHALPLLKKPTE 680
AGLNG+++G + L VL GS+ +G P G+ + + PTE
Sbjct: 317 TAGLNGMQLGDKKLL----VLRGSVGAKNGTLSTINQVPVTPQVPGLRSSQVQMGGHPTE 372
Query: 681 VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
VL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 373 VLCLMNMVLPE--ELLDDEEYEEIMEDVREECSKYGLVKSMEI 413
>gi|327280717|ref|XP_003225098.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 467
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 172/352 (48%), Gaps = 40/352 (11%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P + + + QAA Q P + + + L V+
Sbjct: 77 WDVPPPGFEHITPMQYKAMQAAG----------------QIPATALLPTMTPDGLAVTPT 120
Query: 453 SVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
V + +Q R RRL V N+P +E+A+M+F N + G+ G+ P + I ++
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQD 179
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVV 239
Query: 571 KDSPHKIFIGGISRTLSSKMVM-----------EIVCAFGPLKAYHF--EVNEDHEEPCA 617
DS HK+FIGG+ L+ VM E++ +FGPLKA++ + + A
Sbjct: 240 PDSAHKLFIGGLPNYLNDDQVMFLPPFLSCQVKELLTSFGPLKAFNLVKDSATGLSKGYA 299
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHA 671
F EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 300 FCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQ 359
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 360 VQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGVVKSIEI 409
>gi|195057468|ref|XP_001995263.1| GH23055 [Drosophila grimshawi]
gi|193899469|gb|EDV98335.1| GH23055 [Drosophila grimshawi]
Length = 453
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 178/376 (47%), Gaps = 71/376 (18%)
Query: 383 NRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSA 442
+R + S+ WDV PV + + S QA+ A +V + T SA
Sbjct: 69 SRKCRRTSSAWDVPPVGYEHLSPVQYKSMQASGQIALRIVPNALPTGE----------SA 118
Query: 443 SLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSL-- 500
S+A + R RRL V N+P + ++ + F N +Q + G+L
Sbjct: 119 SIATVT------------RQARRLYVGNIPFNTTDDEMRAFFN-----VQIQRMCGALEN 161
Query: 501 ---PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
+ C EK AF+E + ++ + A+ DG ++ G LKI+RP ++ A G
Sbjct: 162 DGKAVLTCQTNLEKNFAFLELRSMDETTLAISFDGINYRGQSLKIRRPHDYH--AGGTTG 219
Query: 558 KSVASVDSVSG-----------IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF 606
V + VSG +V D+PHKI+IGG+ L+ V E++ FG L+ ++
Sbjct: 220 SFVGATGYVSGAVVQSNAAIATVVPDTPHKIYIGGLPTCLNDDQVKELLMTFGHLRGFNM 279
Query: 607 EVNE-DHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFH 665
+E H + AF EY+D +T +AIAGLNG+++G + L VQ L G
Sbjct: 280 VKDELGHGKGYAFCEYMDASITEQAIAGLNGMQLGERKLI-VQRSLAG----------VR 328
Query: 666 GIPKHALPLLKKP-----------TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECAR 714
+ H LP+L+ P TEVL L N+ P+ L + E E++ +D++ ECA+
Sbjct: 329 NLVTHQLPVLQVPGFPADVKVGKATEVLCLLNMVMPD--ELLDDAEYEDIRKDIKEECAK 386
Query: 715 FGSVKSVNVVK-YGDS 729
FG V S+ + + +G+S
Sbjct: 387 FGKVISIKIPRPFGES 402
>gi|226478958|emb|CAX72974.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 520
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 217/478 (45%), Gaps = 105/478 (21%)
Query: 274 SPKSRHGNSRLKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGR 333
SP++++ +S R RS+ RER +RS S R ++ + R++ G H + R
Sbjct: 63 SPQTKYDSSSDGRSRSKKRER----KRSHSHGHRRHSKSRH--RDYSG--GHKS-----R 109
Query: 334 QHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKW 393
+H R N +S H + D G +P + + A +T +
Sbjct: 110 RHQ--SHHRSPSNSVSAH-KYWDVPPPGFEHVTPAQYK---ALQTSGQV----------- 152
Query: 394 DVAPVETYS---VPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVS 450
PV Y+ VP VH N P+T TT P AG +V
Sbjct: 153 ---PVNVYAAGQVPMPVHAPNA-------------PLTLTTNVPFAGSAVC--------- 187
Query: 451 MDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
R RRL V N+P +A+E+ +MEF N + + G+ G+ P I I E
Sbjct: 188 ----------RQARRLYVGNIPFTATEENMMEFFNKQMRAQGLIQAEGN-PIIAVQINME 236
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
K AF+EF + ++ + L DG F LK++RP+++ + + SV VS +V
Sbjct: 237 KNFAFLEFRSVDETTQGLALDGVLFQNQALKLRRPRDYAPLPGVSEQPSVIVPGVVSTVV 296
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
+DSPHKIF+GG+ L+ V E++ +FGPLK ++ + + + AF EYVD VT
Sbjct: 297 QDSPHKIFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDSNVTD 356
Query: 629 KAIAGLNGLKVG--------------------GQVLTAVQAVLDGSIMDNSGNPPF---H 665
A AGLNG+++G Q L + + +G++ + +G+
Sbjct: 357 HACAGLNGMQLGDKKLIVQRASVGAKHTTGVLPQCLLQMSGLEEGAVQNTTGSGNLTVRS 416
Query: 666 GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G P PTEVL L N+ E + E E+++EDVR EC+++G V+S+ +
Sbjct: 417 GGP---------PTEVLCLMNMI--ETSELEDDEEYEDIVEDVRAECSKYGVVRSLEI 463
>gi|380016747|ref|XP_003692335.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Apis florea]
Length = 428
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 170/338 (50%), Gaps = 37/338 (10%)
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 67 SLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT-------- 115
Query: 450 SMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQR 509
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 116 -----------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINL 163
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI 569
+K AF+EF + ++ + A+ D +F G LKI+RP ++ + D+ S
Sbjct: 164 DKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDY--------QPMPGMTDNPSMN 215
Query: 570 VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVT 627
V DSPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD +T
Sbjct: 216 VPDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMT 275
Query: 628 PKAIAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLK 685
+AIAGLNG+++G + L +A + + M + P +P ++ P TEVL L
Sbjct: 276 DQAIAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLL 335
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ PE + E E E++LED++ EC ++G V+SV +
Sbjct: 336 NMVTPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 371
>gi|384939342|gb|AFI33276.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
Length = 471
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 176/354 (49%), Gaps = 29/354 (8%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++E+VR EC+++G VKS+ +
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEEVRDECSKYGLVKSIEI 413
>gi|403413555|emb|CCM00255.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 377 KTPSPINRSP----EKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
++P+P + +P ++K++ WDV AP E Y T+ QA + + P +
Sbjct: 143 RSPTPPDATPLLQRKRKASGWDVHAPGYEQY-------TAMQAKQTGLFNL----PGANR 191
Query: 431 TQKP--LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL 488
TQ P LA + + + M +R RRL + ++ +E+ L +F N+ +
Sbjct: 192 TQIPPILAIPGLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITPDINEQNLADFFNSKM 251
Query: 489 LSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
+ P + EK AFVEF +AEDA+AA+ DG F LKI+RPK++
Sbjct: 252 KEMSIGTGGPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDY 311
Query: 549 VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
+ S V V VS V DS +KIF+GG+ L+ + VME++ +FG LKA++ V
Sbjct: 312 GGMDSIAPSMHVPGV--VSTNVPDSINKIFVGGLPTYLNEEQVMELLKSFGDLKAFNL-V 368
Query: 609 NEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFH 665
E+ P AF EYVD VT AI L+G+++G + L +A S+ G PP
Sbjct: 369 RENGNGPSKGFAFFEYVDPGVTDVAIQSLSGMELGDKFLVVQRA----SVGAKPGQPPIP 424
Query: 666 G------IPKHALP---LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFG 716
G IP+ LP + +L + N+ PE + + E +V EDV+ EC+++G
Sbjct: 425 GLYDQVEIPRPILPAGDVEGTDARILLMLNMVVPEDLT--DDQEYADVYEDVKEECSKYG 482
Query: 717 SVKSVNV 723
V+ + +
Sbjct: 483 LVEDLRI 489
>gi|384939340|gb|AFI33275.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
Length = 475
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 177/359 (49%), Gaps = 35/359 (9%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN 241
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 PSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 301
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP-----------F 664
AF EYVD VT +AIAGLNG+++G + L VQ G+ +PP
Sbjct: 302 YAFCEYVDINVTDQAIAGLNGMQLGDKKLL-VQRASVGAKNATLVSPPSTINQTPVTLQV 360
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
G+ + + PTEVL L N+ PE L + E EE++E+VR EC+++G VKS+ +
Sbjct: 361 PGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEEVRDECSKYGLVKSIEI 417
>gi|322792032|gb|EFZ16137.1| hypothetical protein SINV_12499 [Solenopsis invicta]
Length = 344
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 149/267 (55%), Gaps = 15/267 (5%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I +K AF+EF +
Sbjct: 32 RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQINLDKNFAFLEFRS 90
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIG 580
++ + A+ DG +F G LKI+RP ++ + D+ S V DSPHKIFIG
Sbjct: 91 IDETTQAMAFDGINFKGQSLKIRRPHDY--------QPMPGMTDNPSMNVPDSPHKIFIG 142
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLK 638
G+ L+ + V E++ +FG L+A++ + + AF EYVD +T +AIAGLNG++
Sbjct: 143 GLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQ 202
Query: 639 VGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVFNPEGFSSL 696
+G + L +A + + M + P +P ++ P TEVL L N+ PE +
Sbjct: 203 LGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPE--ELM 260
Query: 697 SELEVEEVLEDVRLECARFGSVKSVNV 723
E E E++LED++ EC ++G V+SV +
Sbjct: 261 EEEEYEDILEDIKEECNKYGVVRSVEI 287
>gi|170053756|ref|XP_001862821.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
gi|167874130|gb|EDS37513.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
Length = 382
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 137/269 (50%), Gaps = 31/269 (11%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 77 KPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT------ 127
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 128 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 173
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-- 565
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + G + +VA V
Sbjct: 174 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-QPMPGMTDSAVAPVQEKF 232
Query: 566 ---VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
+S +V DSPHKIFIGG+ L+ V E++ +FG LKA++ + + AF E
Sbjct: 233 SGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAE 292
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
YV+ +T +AIAGLNG+++G + L +A
Sbjct: 293 YVEYSITDQAIAGLNGMQLGDKKLIVQRA 321
>gi|358059688|dbj|GAA94557.1| hypothetical protein E5Q_01209 [Mixia osmundae IAM 14324]
Length = 564
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 179/378 (47%), Gaps = 34/378 (8%)
Query: 371 RTEAAAKTPS---PINRSPEKKSAKWDVAPV--ETYSVPSNVHTSNQAASSNAHEMVSSD 425
R E KTP PI++ ++A WDV P+ ET S S + +V
Sbjct: 133 REEVREKTPENTIPISKRRRAQTA-WDVRPIGFETVSA-ETARMSGHFLLPGQNGVVRFP 190
Query: 426 PVTSTTQKPLAGISVSASLAKLNVSMDSVQ-LTQSNRPMRRLCVENLPLSASEKALMEFL 484
P + G+++S + M VQ + R RRL V N+ +A E+ + EF
Sbjct: 191 PGFHEGRGAFGGLNMSGA-GSAAAPMGGVQPIISFARQQRRLYVGNIMPTADEQNVTEFF 249
Query: 485 NNFLLSSGVQ------HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGS 538
N + +G+ V + P + + EK AFVEF + E+AS+A+ DG F
Sbjct: 250 NAKMRENGLSLDDKKVDVQTADPVVSVQVNHEKSYAFVEFRSPEEASSAMSFDGIVFQDQ 309
Query: 539 ILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAF 598
LKI+RPK++ +G+ +S V D+P+K+F+GG+ L + V+E++ +F
Sbjct: 310 QLKIRRPKDY----TGDESGGTHLPGVISSNVPDTPNKVFVGGLPSYLDDEQVLELLSSF 365
Query: 599 GPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIM 656
G L++++ E ++ + AF EY D VT A AGLNG+++G + L +A + ++
Sbjct: 366 GELRSFNLVKEGPQNASKGFAFCEYADPNVTDAACAGLNGMEIGDRYLVVQRAQVGANVY 425
Query: 657 DNSG-----NPPFHGIPKHALPLL------KKPTEVLKLKNVFNPEGFSSLSELEVEEVL 705
+ G NP P + T L++ N+ PE + + + ++
Sbjct: 426 KHPGGYGGSNPALPPALARVAPTIFGQDETAPATRCLQMLNMVTPEEL--VDDQDYADIN 483
Query: 706 EDVRLECARFGSVKSVNV 723
ED++ EC+++G V V +
Sbjct: 484 EDIKDECSKYGEVIDVKI 501
>gi|354486866|ref|XP_003505598.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Cricetulus
griseus]
gi|344242983|gb|EGV99086.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 469
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 173/352 (49%), Gaps = 37/352 (10%)
Query: 387 EKKSAK--WDVAPVETYSVPSNVHTSNQAA----SSNAHEMVSSD-PVTSTTQKPLAGIS 439
EKK + WDV P + + + QAA ++ V+SD V S P+ G
Sbjct: 82 EKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTVTSDGLVASPMPVPVVG-- 139
Query: 440 VSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
+Q R RRL V N+P +E+A+ +F N + + V G+
Sbjct: 140 -----------------SQMTRQARRLYVGNIPFGITEEAMKDFFNAQMQLGVLTQVPGN 182
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P + I +EK AF+EF + ++ + A+ DG F G LKI+RP ++ + S
Sbjct: 183 -PVLAVQINQEKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPS 241
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
V VS +V DS HK+FIGG+ L+ V E++ +FG LKA++ + + A
Sbjct: 242 VYVPGVVSTVVPDSAHKLFIGGMPSYLNDDKVKELLTSFGTLKAFNLVKDSATGLSKGYA 301
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHA 671
F EY+D T +AIAGLNG+++G + L +A + + + P G+
Sbjct: 302 FCEYLDINATDQAIAGLNGMQLGDKKLIVQRASVGSKNATLSTINQTPVTVQVPGLMSSQ 361
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ P+ L + E EE++EDVR EC+++G VKS+ +
Sbjct: 362 VQMGGHPTEVLCLMNMVLPK--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 411
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 31/310 (10%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R RRL + ++ +E+ L EF N + + P + EK AFVEF
Sbjct: 192 SRQSRRLYIGSITPDVNEQNLAEFFNKKMAEMNIGTGSTGNPVLAVQCNYEKNYAFVEFR 251
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVDSVSGIVKDSPHKIF 578
+A+DA+AA+ DG F LKI+RPK++ EV +G V +VS V DS +K+F
Sbjct: 252 SADDATAAMAFDGIIFINGPLKIRRPKDYGGEVVTGSPGIHVPG--AVSTNVPDSINKVF 309
Query: 579 IGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLN 635
+GG+ L+ + VME++ +FG LKA++ V E+ P AF EYVD VT AI LN
Sbjct: 310 VGGLPTYLNEEQVMELLKSFGELKAFNL-VRENGNGPSKGFAFFEYVDSSVTDVAIQSLN 368
Query: 636 GLKVGGQVLTAVQAVLDGSIMDNSGNP--PFHGIPKHALPLLKKPTEV-----LKLKNVF 688
G+++G + L +A S+ G P P+ P P++ EV L + N+
Sbjct: 369 GMELGDRYLVVQRA----SVGAKPGAPGLPYDQFPDIPRPIMPAGAEVTDARILLMLNMV 424
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV--------VKYGDSNISTIQACEGN 740
P+ + + E ++ EDV+ EC+++G V+ + + K+G+ IS A +
Sbjct: 425 TPDDL--IDDEEYGDLYEDVKEECSKYGEVEDLRIPRPVKKDKAKWGEGQISAQDAQRID 482
Query: 741 ENTASAGVGQ 750
E +AGVG+
Sbjct: 483 E---AAGVGR 489
>gi|332026432|gb|EGI66560.1| Splicing factor U2AF 50 kDa subunit [Acromyrmex echinatior]
Length = 435
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 165/340 (48%), Gaps = 40/340 (11%)
Query: 393 WDVAPVETYSVPSNVHTSNQAA-----SSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
WDV P P H + A A + P P A + V S
Sbjct: 70 WDVPP------PGFEHITPLQARLLILYYKAMQAAGQIPANIVADTPQAAVPVVGSTI-- 121
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + SG+ G+ P + C I
Sbjct: 122 ------------TRQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-PVLACQI 168
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVS 567
+K AF+EF + ++ + A+ DG +F G LKI+RP ++ + D+ S
Sbjct: 169 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY--------QPMPGMTDNPS 220
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQL 625
V DSPHKIFIGG+ L+ + V E++ +FG L+A++ + + AF EYVD
Sbjct: 221 MNVPDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVS 280
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDG-SIMDNSGNPPFHGIPKHALPLLKKP-TEVLK 683
+T +AIAGLNG+++G + L +A + + M + P +P ++ P TEVL
Sbjct: 281 MTDQAIAGLNGMQLGDKKLIVQRASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLC 340
Query: 684 LKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE + E E E++LED++ EC ++G V+SV +
Sbjct: 341 LLNMVTPE--ELMEEEEYEDILEDIKEECNKYGVVRSVEI 378
>gi|367042858|ref|XP_003651809.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
gi|346999071|gb|AEO65473.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
Length = 563
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 185/380 (48%), Gaps = 45/380 (11%)
Query: 367 PRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDP 426
PRKR PI +++ +WD+ P +V T+ QA S + +
Sbjct: 148 PRKREPTPDLTDVVPILER-KRRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGA-- 199
Query: 427 VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLN 485
Q+ + + A + + S++S L +N R +RL VENLP SA+E++++ F+N
Sbjct: 200 ---PRQQAMDPTKLQAFMNQPGGSVNSAALRPTNSRQSKRLVVENLPASATEESMVNFIN 256
Query: 486 NFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG-------- 537
L +G+ + + PC+ C+I ++ A +EF + DA+ AL DG S
Sbjct: 257 --LQLNGLNVIENTDPCLQCLIAPDRSFAMLEFRNSPDATVALAFDGISMEADDAHAANG 314
Query: 538 -----SILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVM 592
+ L+I+RPK+++ A E D S +V DSP+KI + + L+ VM
Sbjct: 315 NGAAPAGLRIRRPKDYIVPAVVEDPNYDPDSDVPSSVVIDSPNKISVTNLPLYLTDDQVM 374
Query: 593 EIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAV 650
E++ +FG LK++ + +E AF+EYVD VT AI GLN + +G + L +A
Sbjct: 375 ELLVSFGKLKSFVLVKDNGTQESRGIAFLEYVDPSVTNVAIQGLNNMMLGERALKVQKAS 434
Query: 651 LDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSELEVEE 703
+ I +G G+ +A+ +L T VL+L N+ + + + EE
Sbjct: 435 I--GITQVAGE---MGV--NAMSMLAGTTSTDSDVSRVLQLLNMVTADEL--MDNDDYEE 485
Query: 704 VLEDVRLECARFGSVKSVNV 723
+ +DV+ EC +FG+V S+ +
Sbjct: 486 IRDDVQDECEKFGTVLSLKI 505
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 178/368 (48%), Gaps = 41/368 (11%)
Query: 377 KTPSPINRSP----EKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
++P+P + +P ++K++ WDV AP E Y T+ QA + + P +
Sbjct: 147 RSPTPPDAAPLSQRKRKASGWDVHAPGYEQY-------TAMQAKQTGLFNL----PGANR 195
Query: 431 TQKP--LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL 488
TQ P LA + + M + +R RRL + ++ +E+ L +F N+ +
Sbjct: 196 TQIPPILAIPGLPPPMPVSTFGMGTGVNPNLSRQSRRLYIGSITPDINEQNLTDFFNSKM 255
Query: 489 LSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
+ P + EK AFVEF +AEDA+AA+ DG F LKI+RPK++
Sbjct: 256 KEMNLGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKIRRPKDY 315
Query: 549 VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
V V VS V DS +KIF+GG+ L+ + VME++ +FG LKA++ V
Sbjct: 316 GGPDVIAPNMHVPGV--VSTNVPDSANKIFVGGLPTYLNEEQVMELLSSFGELKAFNL-V 372
Query: 609 NEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFH 665
E+ P AF EYVD VT AI L+G+++G + L +A S+ G P
Sbjct: 373 RENGNGPSKGFAFFEYVDPSVTDVAIQSLSGMELGDKYLVVQRA----SVGAKPGQSPIP 428
Query: 666 G-------IPKHALP---LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARF 715
G IPK LP L + +L + N+ PE + E ++LEDV+ EC ++
Sbjct: 429 GMYDLNPEIPKPILPVGDLSESQDRILLMLNMVVPEELQ--DDQEYADILEDVKEECGKY 486
Query: 716 GSVKSVNV 723
G V+ + +
Sbjct: 487 GEVEDLRI 494
>gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit
[Alvinella pompejana]
Length = 479
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 25/345 (7%)
Query: 393 WDVAPVET-YSVPSN---VHTSNQAASSNAHEMVSSDPVTS---TTQKPLAGISVSASLA 445
WDV PV + P +H A M PV + P A ++++ ++
Sbjct: 89 WDVPPVGFEHMTPMQYKALHGLGPPGGLAAPGMPVVAPVIAANNVVASPTAPMALNTTIP 148
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
++ +R RRL V N+P +E+ +M++ N + +G+ G+ P I C
Sbjct: 149 FAGSAI--------SRQARRLYVGNIPFGVTEEMMMDYFNTQMKMAGLAQAEGN-PVIAC 199
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+ +K AF+EF + ++ + A+ DG +F G LKI+RPK++ + SVA
Sbjct: 200 HVNLDKNFAFLEFRSVDETTQAMAFDGINFQGQSLKIRRPKDYQPLPGMAEVPSVAVPGV 259
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD 623
VS +V+DS HKIFIGG+ L+ V E++ +FG LKA++ + + AF EY+D
Sbjct: 260 VSTVVQDSAHKIFIGGLPNYLNEDQVKELLTSFGLLKAFNLVKDSATGLSKGYAFCEYLD 319
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN--PPFHGIPKHALPLLKKP--- 678
+T +A AGLNG+++G + L +A + N P IP + ++ P
Sbjct: 320 PSITDQACAGLNGMQLGDEKLIVQRASVGAKNAQGGPNVLPVQLQIPGLNMAQVQGPGPT 379
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
TEVL L N+ PE E E EE+LEDV+ EC+++G VKS+ +
Sbjct: 380 TEVLCLMNMVTPE--DLEDEEEYEEILEDVKEECSKYGYVKSIEI 422
>gi|389745686|gb|EIM86867.1| hypothetical protein STEHIDRAFT_57258 [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 25/276 (9%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ +E+ L +F N+ ++ + P + EK AFVEF +AED
Sbjct: 64 RRLYIGSITPDITEQNLTDFFNSKMIEMNIGTGAPGPPVLAVQCNYEKNYAFVEFRSAED 123
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A+AA+ DG F LKI+RPK++ + V V VS V DSPHKIF+GG+
Sbjct: 124 ATAAMAFDGIIFVNGPLKIRRPKDYGGMEMPAPPLHVPGV--VSTNVPDSPHKIFVGGLP 181
Query: 584 RTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVG 640
L+ + VME++ +FG LKA++ V E+ P AF EYVD VT AI L+G+++G
Sbjct: 182 SYLNEEQVMELLKSFGDLKAFNL-VRENGNGPSKGFAFFEYVDPEVTDVAIQSLSGMELG 240
Query: 641 GQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP-------------TEVLKLKNV 687
+ L +A S+ +G P +P P + +P + +L + N+
Sbjct: 241 DRYLVVQRA----SVGAKAGQPGMPNLPYDQFPEIPRPILPAGASDLSSANSRILLMLNM 296
Query: 688 FNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE + + E ++LED+R E A +G V V +
Sbjct: 297 VTPEDL--IDDSEYADLLEDIREEVANYGDVDDVRI 330
>gi|119592808|gb|EAW72402.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_a [Homo
sapiens]
Length = 376
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 384 RSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
RSP + K WDV P + + + QAA Q P +
Sbjct: 78 RSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATAL 121
Query: 439 SVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 122 LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQA 181
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 182 PGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE 240
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEE 614
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 241 NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 300
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
AF EYVD VT +AIAGLNG+++G + L +A
Sbjct: 301 GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRA 335
>gi|392565476|gb|EIW58653.1| hypothetical protein TRAVEDRAFT_37512 [Trametes versicolor
FP-101664 SS1]
Length = 548
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 198/413 (47%), Gaps = 57/413 (13%)
Query: 371 RTEAAAKTPSPINRSP----EKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSS 424
R ++P+P + +P ++K++ WDV AP E Y T+ QA + +
Sbjct: 100 RVMTTRRSPTPSDATPLSQRKRKASGWDVHAPGYEQY-------TAMQAKQTGLFNL--- 149
Query: 425 DPVTSTTQKP--LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALME 482
P + TQ P LA + + M + +R RRL + ++ +E+ L +
Sbjct: 150 -PGANRTQIPPILAIPGLPPPMPVNTFGMGTGVNPNLSRQSRRLYIGSITPDINEQNLTD 208
Query: 483 FLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKI 542
F N+ + + P + EK AFVEF +AEDA+AA+ DG F LKI
Sbjct: 209 FFNSKMKEMNLGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKI 268
Query: 543 KRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLK 602
+RPK++ + ++ VS V DS +KIF+GG+ L+ + VME++ +FG LK
Sbjct: 269 RRPKDY---GGPDMLANMHVPGVVSTNVPDSANKIFVGGLPTYLNEEQVMELLSSFGELK 325
Query: 603 AYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNS 659
A++ V E+ P AF EYVD VT AI L+G+++G + L +A S+
Sbjct: 326 AFNL-VRENGNGPSKGFAFFEYVDPSVTDVAIPSLSGMELGDKYLVVQRA----SVGAKP 380
Query: 660 GNPPFHG---------IPKHALPLLKKPTE-----VLKLKNVFNPEGFSSLSELEVEEVL 705
G P G IPK +P+ ++ E +L + N+ PE S + E ++
Sbjct: 381 GQSPIPGMGMFDMAPEIPKPIMPVGERDLEAMQDRILLMLNMVVPEELS--DDQEYGDLY 438
Query: 706 EDVRLECARFGSVKSVNV--------VKYGDSNISTIQACEGNENTASAGVGQ 750
EDV+ EC ++G+V+ + + K+G+ S I A +E +AGVG+
Sbjct: 439 EDVKEECEKYGTVEDLRIPRPVKKDKAKWGEGRESAIAAQRADE---AAGVGR 488
>gi|195585954|ref|XP_002082743.1| GD25073 [Drosophila simulans]
gi|194194752|gb|EDX08328.1| GD25073 [Drosophila simulans]
Length = 445
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 178/376 (47%), Gaps = 69/376 (18%)
Query: 382 INRSPEKKSAKWDVAPVETYS-VPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISV 440
+ R + + WD++P E YS + + + QA+ A ++S GI
Sbjct: 47 LQRRFGRPATSWDISP-EGYSHLTPQQYKAMQASGQIASRILSD------------GIHA 93
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ----HV 496
S A +SM + R RRL V N+P +E+ +M+F N+ + + G + H
Sbjct: 94 GESAA---ISMIT-------RQARRLYVGNIPFGVTEEEMMQFFNHRITALGYEAKSSHY 143
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEV 551
+ C EK AF+EF + ++A+ AL DG F G LKI+RP ++ +
Sbjct: 144 MDGKAVLTCQTNLEKNFAFLEFRSIDEATQALNFDGMVFRGQTLKIRRPHDYQPVPSISF 203
Query: 552 ASGEAEKSVASVDS-----------VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGP 600
++ E +S D+ V+ IV DSP+KI++GG+ L+ V E++ +FG
Sbjct: 204 SAMENYRSFRVPDTTIANPPNVTIPVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGE 263
Query: 601 LKAYHFEV--NEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN 658
LK + + N + AF EY D LVT AIAGL+G+ +G + L +++ G
Sbjct: 264 LKGLNLVMDGNTSLNKGFAFFEYYDPLVTDHAIAGLHGMLLGDRRLVVQRSIPGGK---- 319
Query: 659 SGNPPFHGIPKHALPLLK-----------KPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
+ P H P+++ PTE L L N+ PE L + E E++ D
Sbjct: 320 ------NAFPGHTAPVVQVPGISTLLDPGSPTETLCLLNMVRPE--ELLDDEEFEDIRTD 371
Query: 708 VRLECARFGSVKSVNV 723
++ ECA+FG V+S+ +
Sbjct: 372 IKQECAKFGEVRSIKI 387
>gi|119592809|gb|EAW72403.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_b [Homo
sapiens]
Length = 356
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 384 RSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
RSP + K WDV P + + + QAA Q P +
Sbjct: 78 RSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATAL 121
Query: 439 SVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 122 LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQA 181
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 182 PGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE 240
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEE 614
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 241 NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 300
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
AF EYVD VT +AIAGLNG+++G + L +A
Sbjct: 301 GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRA 335
>gi|148699340|gb|EDL31287.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_b [Mus musculus]
Length = 356
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 384 RSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
RSP + K WDV P + + + QAA Q P +
Sbjct: 78 RSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATAL 121
Query: 439 SVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 122 LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQA 181
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 182 PGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE 240
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEE 614
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 241 NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 300
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
AF EYVD VT +AIAGLNG+++G + L +A
Sbjct: 301 GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRA 335
>gi|388856534|emb|CCF49840.1| related to pre-mRNA splicing factor U2AF large chain [Ustilago
hordei]
Length = 718
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 28/312 (8%)
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV 493
P G ++ + + V +NR RRL V N+ SA+E ++ F N +L +
Sbjct: 313 PQHGFQPGNGASQPAPTPEEVAQQNNNRQARRLYVGNITHSANEPNMVAFFNEQMLKLKL 372
Query: 494 QHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVAS 553
G P + + +KG AFVEF E+A+ A+ DG F G LKI+RPK++ +
Sbjct: 373 GTEPGE-PAVSAQVNVDKGYAFVEFRHPEEATNAMSFDGIVFQGQSLKIRRPKDY----T 427
Query: 554 GEAEKSVASVDSVSGI----VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--E 607
G + +++ V G+ V DSPHKIF+GG+ L+ V+E++ AFG L+A++ +
Sbjct: 428 GPDVRPASNI-HVPGVISTNVPDSPHKIFVGGLPTYLTDDQVIELLQAFGELRAFNLVKD 486
Query: 608 VNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD--------GSIMDNS 659
+ AF EYVD +T A GLNG+++G + L +A + + N+
Sbjct: 487 TANGASKGFAFCEYVDTALTDLACQGLNGMELGDRNLVVQRASVGSEKKAQAIAATGANA 546
Query: 660 GNPPFHGIPKHALPL------LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECA 713
G G+P +P + + N+ PE + E +++ED+R EC
Sbjct: 547 GALGDAGMPSSVQQFAGEGGDAGEPRSCMVMLNMVTPEELQ--DDEEYADIVEDIREECT 604
Query: 714 RFGSVKSVNVVK 725
++G+V V V +
Sbjct: 605 KYGTVTDVRVPR 616
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 141/275 (51%), Gaps = 14/275 (5%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
+Q R RRL + N+P +E+ ++ F N +L + + G +P + I +K AF+
Sbjct: 197 SQLTRQARRLYIGNIPFGIAEEVMVNFFNEKMLEAKLCSAPG-IPVLAVQINMDKNFAFI 255
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE-AEKSVASVDSVSGIVKDSPH 575
EF + E+ + A+ DG G LKI+RPK++ + + K V V +S +V D PH
Sbjct: 256 EFRSVEETTNAMAFDGIVLQGQSLKIRRPKDYAPIPGVDIMPKHVPGV--ISTVVPDGPH 313
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAG 633
K+F GG+ LS V E++ +FG LKA++ + + F EY+D VT AI G
Sbjct: 314 KVFCGGLPTYLSDDQVKELLSSFGDLKAFNLVKDSGTSFSKGYCFFEYLDTDVTDGAIQG 373
Query: 634 LNGLKVGGQVLTAVQAVLDGSIM---DNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNP 690
LNG+ +G + L +A + +M D S + +P ++P L+ P+ V
Sbjct: 374 LNGMALGDKKLVVQRASVGAKVMEEYDISTDITSMAMP-ISIPGLQMPSTAQTATTVLCL 432
Query: 691 EGFSSLSEL----EVEEVLEDVRLECARFGSVKSV 721
++ EL E E +LEDVR EC+ +G V SV
Sbjct: 433 MNMTTEEELRDDDEYEGILEDVREECSNYGQVLSV 467
>gi|390596686|gb|EIN06087.1| hypothetical protein PUNSTDRAFT_145447 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 602
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 180/366 (49%), Gaps = 39/366 (10%)
Query: 377 KTPSPINRSP----EKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
++P+P P ++K++ WDV AP E Y T+ QA + + P +
Sbjct: 160 RSPTPEGAVPLSQRKRKASGWDVHAPGYEQY-------TAMQAKQTGLFPL----PGANR 208
Query: 431 TQKP--LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL 488
TQ P LA + + + M +R RRL + ++ +E+ L +F N+ +
Sbjct: 209 TQVPPILAVPGLPPPMPVPSFGMGIGGNPNLSRQSRRLYIGSITPEITEQNLADFFNSKM 268
Query: 489 LSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
+ + P + EK AFVEF +AEDA+AA+ DG F LKI+RPK++
Sbjct: 269 IEMSIGTGGPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKIRRPKDY 328
Query: 549 VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
A V V VS V DS +K+F+GG+ L+ + VME++ +FG LKA++ V
Sbjct: 329 GGPDPMGAGLHVPGV--VSTNVPDSINKVFVGGLPAYLNEEQVMELLTSFGELKAFNL-V 385
Query: 609 NEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNP--P 663
E+ P AF EYVD+ VT AI LNG+++G + L +A S+ G P P
Sbjct: 386 RENGNGPSKGFAFFEYVDESVTDVAIQALNGMELGDRYLVVQRA----SVGAKPGMPNLP 441
Query: 664 FHGIPKHALPLLK------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGS 717
+ P+ P++ + +L + ++ PE + + E ++ EDV+ EC +FG+
Sbjct: 442 YEQFPELPRPIMPAGDVSNRDARILLMLSMVVPEDL--VDDQEYADICEDVKEECEKFGA 499
Query: 718 VKSVNV 723
V+ + +
Sbjct: 500 VEDLRI 505
>gi|443731660|gb|ELU16702.1| hypothetical protein CAPTEDRAFT_155651 [Capitella teleta]
Length = 480
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 162/305 (53%), Gaps = 32/305 (10%)
Query: 427 VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNN 486
+ + T P AG ++S R RRL V N+P +E+ +M+F N
Sbjct: 143 IVAPTNIPFAGSAIS-------------------RQARRLYVGNIPFGVTEEMMMDFFNT 183
Query: 487 FLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPK 546
+ + + G+ P I C + +K AF+E+ + ++ + A+ DG +F G LKI+RPK
Sbjct: 184 QMKMAALSQAEGN-PVIACQVNLDKNFAFLEYRSVDETTHAMALDGINFQGQSLKIRRPK 242
Query: 547 EFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF 606
++ + +VA VS +V+DS HKIFIGG+ L+ V E++ +FGPLKA+
Sbjct: 243 DYQPLPGIAETPNVAVPGVVSTVVQDSAHKIFIGGLPNYLNEDQVKELLTSFGPLKAFSL 302
Query: 607 --EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGN 661
+ + AF EY+D +T +A AGLNG+++G + L +A + + +I+ S
Sbjct: 303 VKDSATGLSKGYAFCEYLDISITDQACAGLNGMQLGDKKLIVQRASVGAKNAAII--SSA 360
Query: 662 PPFHGIPKHAL-PLLK--KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
P IP A+ P+ TEVL L N+ PE E E E++LEDV+ EC+++G V
Sbjct: 361 PMQMQIPGLAVNPMAAAGPATEVLCLMNMVLPE--ELEDEEEYEDILEDVKEECSKYGFV 418
Query: 719 KSVNV 723
KS+ +
Sbjct: 419 KSLEI 423
>gi|310793965|gb|EFQ29426.1| U2 snRNP auxilliary factor [Glomerella graminicola M1.001]
Length = 549
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 197/432 (45%), Gaps = 76/432 (17%)
Query: 364 GYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTS 410
G+ R+R+ A TP P R P +++ +WD+ P +V T+
Sbjct: 124 GFGRRERQRSA---TPPPKKREPTPDLTDVTSVLERKRRLTQWDIKPPGYENV-----TA 175
Query: 411 NQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVE 469
QA S + + Q+P+ + A + + ++S L SN R +RL +
Sbjct: 176 EQAKLSGMFPLPGA-----PRQQPMDPSKLQAIMNQPGGQVNSAALKPSNSRQAKRLLIN 230
Query: 470 NLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALC 529
NLP SA+E+ + F N L +G+ + + PC C + ++ A VEF A +A+ AL
Sbjct: 231 NLPPSATEEGIQNFFN--LQLNGLNIIESTDPCTSCQVSKDHSFAVVEFRNASEATVALA 288
Query: 530 CDGCSF------SGSI----LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFI 579
DG S +G+ L I+RPK+++ A + V VS +V D+ +KI +
Sbjct: 289 LDGISMEAEDATNGAAADQGLVIRRPKDYIVPAVVDDVPYEPGV--VSNVVVDTHNKISV 346
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGL 637
+ LS + V E++ +FG LKA+ ++ EE AF EYVD T AI GLNG+
Sbjct: 347 ANMPVYLSEEQVSELLVSFGELKAFVLVRDKSTEESRGIAFCEYVDPAATDVAIQGLNGM 406
Query: 638 KVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK--HALPLL-------KKPTEVLKLKNVF 688
+G + L +A + G G+ A+ +L + T VL+L N+
Sbjct: 407 DLGDKRLKVQKASV--------GVTQVAGVEMGVAAMSMLAGTTSTDSEETRVLQLLNMV 458
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK-YGDSNISTIQACEGNENTASAG 747
PE + + EE+ EDV+ ECA+FG+V V + + G S SAG
Sbjct: 459 TPEEL--MDNDDYEEIKEDVQEECAKFGTVLDVKIPRPVGGSR-------------QSAG 503
Query: 748 VGQNLTNDETNE 759
VG+ ET E
Sbjct: 504 VGKIFVKFETKE 515
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 180/405 (44%), Gaps = 80/405 (19%)
Query: 363 GGYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHT 409
G+ R+R+ A TP P R P +++ +WD+ P +V T
Sbjct: 124 AGFGRRERQRSA---TPPPKKREPTPDLTDITSVLERKRRLTQWDIKPPGYENV-----T 175
Query: 410 SNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCV 468
+ QA S + + Q+P+ + A + + ++S L SN R +RL +
Sbjct: 176 AEQAKLSGMFPLPGA-----PRQQPIDPSKLQAIMNQPGGQVNSAALKPSNSRQAKRLLI 230
Query: 469 ENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAAL 528
NLP SA+E+++ F N L +G+ + + PC C + ++ A VEF A +A+ AL
Sbjct: 231 NNLPPSATEESIQSFFN--LQLNGLNIIESADPCTSCQVSKDNSFAVVEFRNASEATIAL 288
Query: 529 CCDGCSF----------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIF 578
DG S + L I RPK+++ A + V VS +V D+P K+
Sbjct: 289 ALDGISMEADDATNGEAANQGLSIHRPKDYIVPAVVDDVPYEPGV--VSNVVIDTPSKLS 346
Query: 579 IGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNG 636
I + LS + V E++ +FG LKA+ + EE AF EYVD T AI GLNG
Sbjct: 347 IANLPTYLSDEQVSELLVSFGELKAFVLVRDRSTEESRGIAFCEYVDPAATDVAIQGLNG 406
Query: 637 LKVGGQVL------------------TAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP 678
+ +G + L A ++L G+ +SG
Sbjct: 407 MDLGDKKLRVQKASVGVTQVAGVEMGVAAMSMLAGTTSTDSGE----------------- 449
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
T VL+L N+ PE + + EE+ EDV+ EC++FG+V + +
Sbjct: 450 TRVLQLLNMVTPEEL--MDNDDYEEIKEDVQEECSKFGNVLDIKI 492
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 179/367 (48%), Gaps = 41/367 (11%)
Query: 381 PINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSN---------AHEMVSSDPVTSTT 431
PIN ++ + WDV P ++ T+ QA S + P+
Sbjct: 139 PINER-RRRMSMWDVKPTGYEAI-----TAEQAKMSGKTILNIFLLWLRVPGLFPLPGAP 192
Query: 432 QKPLAGISVSASLAKLNVSMD-----SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNN 486
++ + +S +++ K +M+ ++Q QS R RR+ V N+P E+ L+ F N+
Sbjct: 193 RQSMMDLSKLSTVHKGPGAMNIPNPQALQPLQS-RQSRRIHVGNIPQPIDEEHLVNFFND 251
Query: 487 FLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPK 546
+ V G P I + EKG AF+EF EDA+ A+ DG S+ + LKI+RP
Sbjct: 252 TMSCLNVT-TSGDNPVISAQVNHEKGYAFLEFRQPEDATVAIGFDGISYMNNSLKIRRPM 310
Query: 547 EFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF 606
+++ V + +S D+P+KI IGG+ L + V+E++ +FG LKA++
Sbjct: 311 DYI-VPQMPTDDGSYVPGVISTNFTDTPNKIHIGGLPTYLDDEQVIELLKSFGELKAFNL 369
Query: 607 --EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNP 662
+ + + AF EYVD VT A GLNG+++G ++L +A + + SG
Sbjct: 370 IKDAATNESKGFAFCEYVDPDVTDIACEGLNGMELGDKILVVKRASIGTKQKPISTSGG- 428
Query: 663 PFHGIPKHALPLLK------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFG 716
GI ++ +L +PT VL++ N+ PE + E EE+ ED+R EC+++G
Sbjct: 429 ---GI--ASITMLAEEEGQLRPTRVLQMFNMVTPEELQ--DDDEYEEISEDIRDECSKYG 481
Query: 717 SVKSVNV 723
V + +
Sbjct: 482 KVLDLKI 488
>gi|443898020|dbj|GAC75358.1| splicing factor U2AF, large subunit [Pseudozyma antarctica T-34]
Length = 699
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 28/311 (9%)
Query: 432 QKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSS 491
Q P AG A N ++ + S R RRL V N+ A+E +++ F N +L
Sbjct: 300 QPPFAGQYQQGHPASHNQALATAD---SGRQARRLYVGNITHQANEPSMVAFFNEQMLKL 356
Query: 492 GVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEV 551
+ G P + + +KG AFVEF ++A+ A+ DG F G LKI+RPK++
Sbjct: 357 KLGTEPGE-PAVSAQVNVDKGYAFVEFRHPDEATNAMSFDGIVFQGQSLKIRRPKDY--- 412
Query: 552 ASGEAEKSVASVDSVSGI----VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF- 606
+G + +S+ V G+ V DSP KIF+GG+ L+ V+E++ AFG L++++
Sbjct: 413 -TGPDVRPPSSI-HVPGVISTNVPDSPFKIFVGGLPTYLTDDQVIELLQAFGELRSFNLV 470
Query: 607 -EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-----SIMDNSG 660
+ + + AF EYVD +T A GLNG+++G + L +A + +I
Sbjct: 471 KDPATNASKGFAFCEYVDTALTDLACQGLNGMELGDRNLVVQRASVGSEKKAQAIAAYGA 530
Query: 661 NPPFHGIPKHALPL------LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECAR 714
N G+P +PT + + N+ PE + E +++ED+R EC +
Sbjct: 531 NVGALGVPSSVQQFAGAGGDAGEPTSCMVMLNMVTPEELQ--DDEEYADIVEDIRDECTK 588
Query: 715 FGSVKSVNVVK 725
FG+V V V +
Sbjct: 589 FGTVNDVRVPR 599
>gi|95103124|gb|ABF51503.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Bombyx mori]
Length = 306
Score = 128 bits (322), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 28/293 (9%)
Query: 381 PINRSPEKK-SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
P RS +K S WDV P + + + QAA +V+ P + P+ G +
Sbjct: 37 PNKRSRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGST 93
Query: 440 VSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
++ R RRL V N+P +E+ MEF N + SG+ G+
Sbjct: 94 IT-------------------RQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLAQAAGN 134
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P + C I +K AF+EF + ++ + A+ DG +F G LKI+RP ++ + E
Sbjct: 135 -PVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPGTENPAI 193
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
+S +V DSPHKIFIGG+ L+ V E++ +FG L+A++ + + + A
Sbjct: 194 NVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYA 253
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL--DGSIMDNSGNPPFHGIP 668
F EYVD +T +AIAGLNG+++G + L +A + S + +G P P
Sbjct: 254 FAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGAKNSTLALTGAAPVQRYP 306
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 29/352 (8%)
Query: 384 RSP--EKKSAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
RSP EKK + WDV P V + + QAA +++++ + + T LA
Sbjct: 338 RSPCHEKKKVRKYWDVPPPGFEHVTPMQYKAMQAAG----QILATALLPTMTPGGLA--- 390
Query: 440 VSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
+ + V + Q+T R RRL V +P +E+++++FLN + G+ G+
Sbjct: 391 ----VTPMPVPVVGSQMT---RQARRLYVGTIPFGITEESMLDFLNTQMHLRGLTQAPGN 443
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P + I +K AF+EF + ++ + AL DG F G LKI+RP ++ + S
Sbjct: 444 -PILAVQINLDKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQPLPGMSGSPS 502
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
V VS IV DS HK+FIGG+ L+ V E++ + G L+A++ + + A
Sbjct: 503 VYVPGVVSTIVPDSAHKLFIGGLPNYLNDDQVKELLTSVGILRAFNLVKDSITGLSKGYA 562
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-----SIMDNSG-NPPFHGIPKHA 671
F EY+D VT +AIA LNG+ +G + L +A + SI++ + G+
Sbjct: 563 FCEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVGAKNVALSIINQTPVTLQVPGLTSSQ 622
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PT VL L N+ P+ L + E EE+++DVR EC ++G VKS+ +
Sbjct: 623 VQMGGHPTTVLCLMNMVLPK--ELLDDEEYEEIVDDVRDECNKYGLVKSIEI 672
>gi|309266895|ref|XP_003086891.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Mus
musculus]
Length = 493
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 29/352 (8%)
Query: 384 RSP--EKKSAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
RSP EKK + WDV P V + + QAA +++++ + + T LA
Sbjct: 101 RSPCHEKKKVRKYWDVPPPGFEHVTPMQYKAMQAAG----QILATALLPTMTPGGLA--- 153
Query: 440 VSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
+ + V + Q+T R RRL V +P +E+++++FLN + G+ G+
Sbjct: 154 ----VTPMPVPVVGSQMT---RQARRLYVGTIPFGITEESMLDFLNTQMHLRGLTQAPGN 206
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P + I +K AF+EF + ++ + AL DG F G LKI+RP ++ + S
Sbjct: 207 -PILAVQINLDKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQPLPGMSGSPS 265
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
V VS IV DS HK+FIGG+ L+ V E++ + G L+A++ + + A
Sbjct: 266 VYVPGVVSTIVPDSAHKLFIGGLPNYLNDDQVKELLTSVGILRAFNLVKDSITGLSKGYA 325
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-----SIMDNSG-NPPFHGIPKHA 671
F EY+D VT +AIA LNG+ +G + L +A + SI++ + G+
Sbjct: 326 FCEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVGAKNVALSIINQTPVTLQVPGLTSSQ 385
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PT VL L N+ P+ L + E EE+++DVR EC ++G VKS+ +
Sbjct: 386 VQMGGHPTTVLCLMNMVLPK--ELLDDEEYEEIVDDVRDECNKYGLVKSIEI 435
>gi|409040470|gb|EKM49957.1| hypothetical protein PHACADRAFT_264412 [Phanerochaete carnosa
HHB-10118-sp]
Length = 575
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 186/388 (47%), Gaps = 48/388 (12%)
Query: 387 EKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKP--LAGISVSA 442
++K++ WD+ AP E Y T+ QA + + P + TQ P LA +
Sbjct: 152 KRKASGWDIHAPGYEQY-------TAMQAKQTGLFNL----PGANRTQIPPILAVPGLPP 200
Query: 443 SLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPC 502
+ + M +R RRL + ++ +E+ L +F N + + P
Sbjct: 201 PMPVQSFGMGMGVNPNLSRQSRRLYIGSITPEINEQNLADFFNEKMKEMSIGTGAPGNPV 260
Query: 503 IGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS 562
+ EK AFVEF +AEDA+AA+ DG F LKI+RPK++ G +E S
Sbjct: 261 LAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLSGPLKIRRPKDY-----GGSENLAPS 315
Query: 563 V---DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---C 616
+ VS V DS +K+F+GG+ L+ + VME++ +FG LKA++ V E+ P
Sbjct: 316 MHVPGVVSTNVPDSINKVFVGGLPPYLNEEQVMELLTSFGDLKAFNL-VRENGNGPSKGF 374
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIPKHALP 673
AF EYVD VT AI LN +++G + L +A + +G I + P IPK LP
Sbjct: 375 AFFEYVDPAVTDVAIQSLNEMELGDKYLVVQRASVGAKNGQIPPQALYP--TEIPKPILP 432
Query: 674 ---LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV------- 723
L +L + N+ PE + + E ++ EDV+ EC + G ++ + +
Sbjct: 433 AGDLEGVEARILLMLNMVVPEDLN--DDQEYADIYEDVKDECEKHGPIEDLRIPRPVKKD 490
Query: 724 -VKYGDSNISTIQACEGNENTASAGVGQ 750
K+G+S + + A +E +AGVG+
Sbjct: 491 KAKWGESGLDPLSAQRVDE---AAGVGR 515
>gi|312078073|ref|XP_003141580.1| U2af splicing factor protein 1 [Loa loa]
Length = 460
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 48/346 (13%)
Query: 386 PEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
P+KK WDV PV + + QAA V S P+ G SV+
Sbjct: 138 PKKKYKFWDVPPVGYEHLTPKEYKELQAAGQIPRNNVQS-------AVPVVGPSVTC--- 187
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
QS RRL V N+P SE A+++F N + G+ G+ P + C
Sbjct: 188 ------------QS----RRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQAPGN-PVLAC 230
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+ +K AF+EF + ++ +A + DG +F G LKI+RP+++ +++ ++
Sbjct: 231 QMNLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLGNMM---- 286
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD 623
VS IV DSPHKIFIGG+ L+++ V E++ +FG LKA++ E + + AF EY+D
Sbjct: 287 VSNIVPDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFAEYLD 346
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL---LKKPTE 680
+T +AIAGLNG+++G + L + + +N F I + L PTE
Sbjct: 347 PSLTDQAIAGLNGMQLGDKNLVVQLSCANAR--NNVAQNTFPQIQVAGIDLSHGAGPPTE 404
Query: 681 VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
VL L N+ + EL+ +E E + C+ F K N++ +
Sbjct: 405 VLCLMNMVTED------ELKDDEEYEGI---CS-FSLFKMANIIWF 440
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 153/305 (50%), Gaps = 45/305 (14%)
Query: 452 DSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ----HVHGSLPCIGCVI 507
+S ++ R RRL V N+P +++ +M+F N+ +++ G + H + C
Sbjct: 99 ESAAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQT 158
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEVASGEAEKSV-- 560
EK AF+EF + ++AS AL DG F G LKI+RP ++ + V++ E+ +S
Sbjct: 159 NLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRV 218
Query: 561 ---------ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVN 609
A V+ IV DSP+KI++GG+ L+ V E++ +FG LK + + N
Sbjct: 219 PAINVAQQPAVTLPVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTN 278
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
+ + AF EY D VT AIAGL+G+ +G + L +++ G + P
Sbjct: 279 TNLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSIPGGK----------NAFPG 328
Query: 670 HALPLLK-----------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
H +L+ PTE L L N+ PE L + E E++ D++ ECA+FG V
Sbjct: 329 HLPTVLQVPGISTLQDPGSPTETLCLLNMVRPE--ELLDDEEFEDIRTDIKQECAKFGEV 386
Query: 719 KSVNV 723
+S+ +
Sbjct: 387 RSIKI 391
>gi|195346998|ref|XP_002040041.1| GM15574 [Drosophila sechellia]
gi|194135390|gb|EDW56906.1| GM15574 [Drosophila sechellia]
Length = 445
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 176/376 (46%), Gaps = 69/376 (18%)
Query: 382 INRSPEKKSAKWDVAPVETYS-VPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISV 440
+ R + + WD+ P E YS + + + QA+ A ++S GI
Sbjct: 47 LQRRFGRPATSWDIPP-EGYSHLTPQQYKAMQASGQIASRILSD------------GIHA 93
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ----HV 496
S A +SM + R RRL V N+P +E+ +M+F N+ +++ G + H
Sbjct: 94 GESAA---ISMIT-------RQARRLYVGNIPFGVTEEEMMQFFNHRIMAQGYEAKSSHY 143
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE- 555
+ C EK AF+EF + ++A+ AL DG + G LKI+RP ++ V S
Sbjct: 144 MDGKAVLTCQTHLEKNFAFLEFRSIDEATQALNFDGMVYRGQTLKIRRPHDYQPVPSISF 203
Query: 556 -----------AEKSVAS----VDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGP 600
++A+ V+ IV DSP+KI++GG+ L+ V E++ +FG
Sbjct: 204 SAMENYRSFRVPATTIANPPNVTIPVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGE 263
Query: 601 LKAYHFEV--NEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN 658
LK + + N + AF EY D LVT AIAGL+G+ +G + L +++ G
Sbjct: 264 LKGLNLVMDGNTSLNKGFAFFEYYDPLVTDHAIAGLHGMLLGDRRLVVQRSIPGGK---- 319
Query: 659 SGNPPFHGIPKHALPLLK-----------KPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
+ P H P+++ PTE L L N+ PE L + E E++ D
Sbjct: 320 ------NAFPGHTGPVVQVPGISTLLDPGSPTETLCLLNMVRPE--ELLDDEEFEDIRTD 371
Query: 708 VRLECARFGSVKSVNV 723
++ ECA+FG V+S+ +
Sbjct: 372 IKQECAKFGEVRSIKI 387
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 153/305 (50%), Gaps = 45/305 (14%)
Query: 452 DSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ----HVHGSLPCIGCVI 507
+S ++ R RRL V N+P +++ +M+F N+ +++ G + H + C
Sbjct: 99 ESAAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQT 158
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEVASGEAEKSV-- 560
EK AF+EF + ++AS AL DG F G LKI+RP ++ + V++ E+ +S
Sbjct: 159 NLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRV 218
Query: 561 ---------ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVN 609
A V+ IV DSP+KI++GG+ L+ V E++ +FG LK + + N
Sbjct: 219 PAINVAQQPAVTLPVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTN 278
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
+ + AF EY D VT AIAGL+G+ +G + L +++ G + P
Sbjct: 279 TNLNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSIPGGK----------NAFPG 328
Query: 670 HALPLLK-----------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
H +L+ PTE L L N+ PE L + E E++ D++ ECA+FG V
Sbjct: 329 HLPTVLQVPGISTLQDPGSPTETLCLLNMVRPE--ELLDDEEFEDIRTDIKQECAKFGEV 386
Query: 719 KSVNV 723
+S+ +
Sbjct: 387 RSIKI 391
>gi|297706019|ref|XP_002829852.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pongo abelii]
Length = 352
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 11/256 (4%)
Query: 476 SEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF 535
+++A+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F
Sbjct: 73 TKEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIF 131
Query: 536 SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIV 595
G LKI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++
Sbjct: 132 QGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELL 191
Query: 596 CAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG 653
+FGPLKA++ + + AF EYVD VT +AIAGLNG+++G + L +A +
Sbjct: 192 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 251
Query: 654 --SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLED 707
+ + P G+ + + PTEVL L N+ PE L + E EE++ED
Sbjct: 252 KNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVED 309
Query: 708 VRLECARFGSVKSVNV 723
VR EC+++G VKS+ +
Sbjct: 310 VRDECSKYGLVKSIEI 325
>gi|426196755|gb|EKV46683.1| hypothetical protein AGABI2DRAFT_206147 [Agaricus bisporus var.
bisporus H97]
Length = 558
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 190/403 (47%), Gaps = 41/403 (10%)
Query: 368 RKRRTEAAAKTPSPINRSPEKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSSD 425
++RR+ PS R ++K++ WDV AP E YS + QA + +
Sbjct: 117 QERRSPTPENCPSLSQR--KRKASGWDVHAPGYEQYS-------AMQAKQTGLFNL---- 163
Query: 426 PVTSTTQKP--LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEF 483
P + TQ P L+ + + + M +R RRL + ++ +E+ L +F
Sbjct: 164 PGANRTQIPPILSIPGLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITQEVNEQNLADF 223
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIK 543
N + + P + EK AFVEF +AEDA+AA+ DG F LKI+
Sbjct: 224 FNAKMAEMNIGTGITGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIR 283
Query: 544 RPKEF---VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGP 600
RPK++ V+ G V S + V DS +K+F+GG+ L+ + VME++ +FG
Sbjct: 284 RPKDYGGDTIVSPGVHVPGVVSTN-----VPDSINKVFVGGLPTYLNEEQVMELLKSFGE 338
Query: 601 LKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN 658
LKA++ E + AF EYVDQ VT AI LNG+++G + L VQ G+
Sbjct: 339 LKAFNLVRENGTGTSKGFAFFEYVDQAVTDVAIQSLNGMELGDRYLV-VQRASVGAKPGT 397
Query: 659 SGNPP------FHGIPKHALPLLKKPT----EVLKLKNVFNPEGFSSLSELEVEEVLEDV 708
G P F IP+ +P K T +L + N+ PE + E ++ +DV
Sbjct: 398 PGMIPNLPYDQFPEIPRPIMPAGKDQTSSESRILLMLNMVTPEDLH--EDDEYGDLYDDV 455
Query: 709 RLECARFGSVKSVNVVK-YGDSNISTIQACEGNENTASAGVGQ 750
+ EC+++G ++ + + + S++ A + +AGVG+
Sbjct: 456 KAECSKYGELEDLRIPRPVKKDKTSSMSAQDAQRIDEAAGVGR 498
>gi|302685922|ref|XP_003032641.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
gi|300106335|gb|EFI97738.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
Length = 556
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 50/322 (15%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R RRL + ++ +E L EF N+ + + P + EK AFVEF
Sbjct: 190 SRQSRRLYIGSITPEINEHNLAEFFNSKMTEMNIGTGGPGNPVLAVQCNYEKNYAFVEFR 249
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVDSVSGI----VKDSP 574
+A+DA+AA+ DG F LKI+RPK++ + VAS A + V GI V DS
Sbjct: 250 SADDATAAMAFDGIIFLNGPLKIRRPKDYDISVAS-------APMIHVPGIISTNVPDSA 302
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED----HEEPCAFIEYVDQLVTPKA 630
+KIF+GG+ L+ + V E++ +FG LKA++ V E ++ AF EYVD VT A
Sbjct: 303 NKIFVGGLPAYLNEEQVQELLTSFGELKAFNL-VRETGTGASKQGYAFFEYVDPNVTDVA 361
Query: 631 IAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIPKHALPLLKKP--------- 678
I LNG+++G + L +A + DG+I + +P +P + KP
Sbjct: 362 IQSLNGMELGDRFLVVQRASVGAKDGTIPN---------LPAELMPAIPKPIMPAGQTDT 412
Query: 679 ---TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV-------KYGD 728
VL + N+ P+ + + E ++LED++ EC++FG V+ + V K+
Sbjct: 413 SGDARVLLMLNMVTPDDL--VDDDEYGDLLEDIKEECSKFGPVEDLRVPRPVKKEKKWAP 470
Query: 729 SNISTIQACEGNENTASAGVGQ 750
A E +AGVG+
Sbjct: 471 GEGGREAAVEAQRADEAAGVGR 492
>gi|148697816|gb|EDL29763.1| mCG68163 [Mus musculus]
Length = 472
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 29/352 (8%)
Query: 384 RSP--EKKSAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
RSP EKK + WDV P V + + QAA +++++ + + T LA
Sbjct: 80 RSPCHEKKKVRKYWDVPPPGFEHVTPMQYKAMQAAG----QILATALLPTMTPGGLA--- 132
Query: 440 VSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
+ + V + Q+T R RRL V +P +E+++++FLN + G+ G+
Sbjct: 133 ----VTPMPVPVVGSQMT---RQARRLYVGTIPFGITEESMLDFLNTQMHLRGLTQAPGN 185
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P + I +K AF+EF + ++ + AL DG F G LKI+RP ++ + S
Sbjct: 186 -PILAVQINLDKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQPLPGMSGSPS 244
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
V VS IV DS HK+FIGG+ L+ V E++ + G L+A++ + + A
Sbjct: 245 VYVPGVVSTIVPDSAHKLFIGGLPNYLNDDQVKELLTSVGILRAFNLVKDSITGLSKGYA 304
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-----SIMDNSG-NPPFHGIPKHA 671
F EY+D VT +AIA LNG+ +G + L +A + SI++ + G+
Sbjct: 305 FCEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVGAKNVALSIINQTPVTLQVPGLTSSQ 364
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PT VL L N+ P+ L + E EE+++DVR EC ++G VKS+ +
Sbjct: 365 VQMGGHPTTVLCLMNMVLPK--ELLDDEEYEEIVDDVRDECNKYGLVKSIEI 414
>gi|198456623|ref|XP_001360392.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
gi|198135682|gb|EAL24967.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 164/369 (44%), Gaps = 62/369 (16%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P E Y+ + + AS + SD +P A D
Sbjct: 77 WDVPP-EGYAHVTPMQYKAMQASGQITARIQSD------TQPTA---------------D 114
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNN-FLL---SSGVQHVHGSLPCIGCVIQ 508
+ + R RRL V N+P +E +M F N FLL + G Q + C
Sbjct: 115 TAAIAMVTRQARRLYVGNIPFGVTEDDIMAFFNQQFLLLGDNCGGQLCLDGKAVLSCQAN 174
Query: 509 REKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF--------------VEVASG 554
+K AF+EF + ++A+ A DG SF G +LKI+RP ++ + A G
Sbjct: 175 LDKNFAFIEFRSMQEATQATTFDGISFRGQVLKIRRPHDYHPVGSVGAAAGAGSIPDAVG 234
Query: 555 -------------EAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPL 601
AE ++S +V DSPHKI+IGG+ L+ + E++ +FG L
Sbjct: 235 GCASSAAAKSRSSSAETGSLGSQAISNLVPDSPHKIYIGGLPTCLNETQIKELLLSFGQL 294
Query: 602 KAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNS 659
+ ++ + + + AF EYVD L+T + IA LNG+++G + L +++ G N
Sbjct: 295 RGFNLVKDPSTTLSKGYAFFEYVDPLLTEQVIANLNGMQLGDRRLIVQRSIPSGRYAGNQ 354
Query: 660 GNP-PFHGIPKHAL----PLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECAR 714
P G+ +L L T+VL L N+ PE L E E++ D+ EC++
Sbjct: 355 QIPIQVPGLVATSLTGSTAGLNNATQVLCLLNMVLPEEL--LDNEEYEDIRADIEQECSK 412
Query: 715 FGSVKSVNV 723
+G V S+ +
Sbjct: 413 YGEVLSLKI 421
>gi|76779874|gb|AAI06135.1| U2af2 protein [Mus musculus]
Length = 307
Score = 125 bits (315), Expect = 8e-26, Method: Composition-based stats.
Identities = 87/252 (34%), Positives = 137/252 (54%), Gaps = 11/252 (4%)
Query: 480 LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI 539
+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F G
Sbjct: 1 MMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS 59
Query: 540 LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFG 599
LKI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++ +FG
Sbjct: 60 LKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFG 119
Query: 600 PLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL--DGSI 655
PLKA++ + + AF EYVD VT +AIAGLNG+++G + L +A + +
Sbjct: 120 PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNAT 179
Query: 656 MDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLE 711
+ P G+ + + PTEVL L N+ PE L + E EE++EDVR E
Sbjct: 180 LSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDE 237
Query: 712 CARFGSVKSVNV 723
C+++G VKS+ +
Sbjct: 238 CSKYGLVKSIEI 249
>gi|156061663|ref|XP_001596754.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980]
gi|154700378|gb|EDO00117.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 518
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 173/362 (47%), Gaps = 49/362 (13%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + A +A+
Sbjct: 126 KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA-----PRQQPMDPSKLQAFMAQ 175
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S+ + L SN R +RL V N+P E+ L+ F N L +G+ + GS PCI
Sbjct: 176 PSGSVTNAALKPSNSRQSKRLLVHNIPADTKEETLVGFFN--LQLNGLNVIEGSDPCISA 233
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF---------SGSI----LKIKRPKEFVEVA 552
+ ++ A +EF T DA+ AL DG + +GS L I+RPK+++ A
Sbjct: 234 QVSKDGSFALLEFKTQSDATVALALDGITMENNDHMVTGNGSADTQGLSIRRPKDYIVPA 293
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNE 610
+ V VS IV D+ +KI + I L+ + V E++ +FG LKA+ + N
Sbjct: 294 VTDETPFEPGV--VSNIVPDTQNKISVANIPHYLNDEQVTELLVSFGELKAFVLVKDSNT 351
Query: 611 DHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK- 669
D AF EYVD T A+ GLNG+++G + L +A + GN G+
Sbjct: 352 DESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQRASI--------GNTQVSGLEMS 403
Query: 670 -HALPLLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
+A+ +L T VL+L N+ PE + + EE+ EDV+ EC ++G V +
Sbjct: 404 VNAMSMLAGTTSQDLENGRVLQLLNMVTPEEL--IDNEDYEEICEDVKEECEKYGKVLEM 461
Query: 722 NV 723
V
Sbjct: 462 KV 463
>gi|350295506|gb|EGZ76483.1| hypothetical protein NEUTE2DRAFT_76972 [Neurospora tetrasperma FGSC
2509]
Length = 592
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 42/357 (11%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+ + + A + +
Sbjct: 200 KRRMTQWDIKPPGYGNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMTQ 249
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+++S L +N R +RL V N+P SA++++L+ F N L +G+ + + PC+ C
Sbjct: 250 PGGAVNSAALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSADPCVQC 307
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSG---------SILKIKRPKEFVEVASGEA 556
I + A +EF + DA+ AL DG + LKI+RPK+++ A E
Sbjct: 308 QISPDHSFAMLEFKNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKDYIVPAIVED 367
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP- 615
+ S IV DSP+KI + I LS + +ME++ AFG LK++ V + H E
Sbjct: 368 PNYDPDSEVPSSIVIDSPNKISVTNIPAYLSEEQIMELLVAFGKLKSFVL-VKDKHTEES 426
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP 673
AF EY D VT AI GLN + +G + L +A I +G + +A+
Sbjct: 427 RGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASY--GIQQVAGE-----LSVNAMS 479
Query: 674 LLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+L T V++L N+ + + + EE+ +DV+ EC +FG++ S+ +
Sbjct: 480 MLAGTTSLDGDVSRVVQLLNMVTADEL--MDNDDYEEIRDDVQEECEKFGTIVSLKI 534
>gi|321479007|gb|EFX89963.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Daphnia pulex]
Length = 487
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 149/301 (49%), Gaps = 44/301 (14%)
Query: 460 NRPMRRLCVENLPLS-----ASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQA 514
R RRL V N+P A+E+ +M+F N + SG+ G P + C I +K A
Sbjct: 136 TRQARRLYVGNIPFGVSDVRAAEEEMMDFFNQQMHLSGLSQAPGH-PILACQINLDKNFA 194
Query: 515 FVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF--------------------VEVASG 554
F+EF + ++ S A+ DG +F G LKI+RP ++ ++SG
Sbjct: 195 FLEFRSIDETSQAMAFDGINFKGQTLKIRRPHDYHPTPGGGGGGGGGGGGPETTPGMSSG 254
Query: 555 EAEKSVASVD------SVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF-- 606
+ A ++S IV D+PHK+FIGG+ L+ + E++ +FG L+A++
Sbjct: 255 GITEKRAGGGGGGGGGTMSTIVPDTPHKLFIGGLPNYLNEEQ--ELLMSFGQLRAFNLVK 312
Query: 607 EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFH- 665
+ + AF EY D VT +AI+GLNG+++G + + +A + P
Sbjct: 313 DTATGLSKGYAFCEYADVTVTDQAISGLNGMQLGDKKIIIQRASVGAKNAAAYAQMPVQI 372
Query: 666 ---GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVN 722
G A P +PTEVL L N+ PE + E EE+++D+R EC R G+V+SV
Sbjct: 373 QVPGFNLAAGP--GQPTEVLCLLNMVTPEELR--DDEEYEEIVDDIREECNRHGAVRSVE 428
Query: 723 V 723
+
Sbjct: 429 I 429
>gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
gi|46101379|gb|EAK86612.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
Length = 727
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 146/292 (50%), Gaps = 38/292 (13%)
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
+NR RRL V N+ A+E+ ++ F N +L + G P + + +KG AFVEF
Sbjct: 348 ANRQARRLYVGNITHQANEQNIVAFFNEQMLKLKLGTEPGE-PAVSAQVNVDKGYAFVEF 406
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI----VKDSP 574
E+A+ A+ DG F LKI+RPK++ +G + +++ V G+ V DSP
Sbjct: 407 RHPEEATNAMSFDGIVFQAQSLKIRRPKDY----TGPDIRPPSNI-HVPGVISTNVPDSP 461
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIA 632
HKIF+GG+ L+ V+E++ AFG L+A++ + + AF EYVD +T A
Sbjct: 462 HKIFVGGLPTYLNDDQVIELLQAFGELRAFNLVKDTGTGASKGFAFCEYVDPALTDLACQ 521
Query: 633 GLNGLKVG----------------GQVLTAVQA---VLDGSIMDNSGNPPFHGIPKHALP 673
GLNG+++G Q L A A L G+ + +S F G A
Sbjct: 522 GLNGMELGDRNLVVQRASVGSEKKAQALAATGANMGALGGAAVPSSVQ-KFAGDGGDA-- 578
Query: 674 LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK 725
+PT + + N+ PE + E +++ED+R EC ++G+V V + +
Sbjct: 579 --GEPTTCMVMLNMVTPEELQ--DDEEYADIVEDIRDECNKYGAVSDVRIPR 626
>gi|336465212|gb|EGO53452.1| hypothetical protein NEUTE1DRAFT_92746 [Neurospora tetrasperma FGSC
2508]
Length = 584
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 42/357 (11%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+ + + A + +
Sbjct: 192 KRRMTQWDIKPPGYGNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMTQ 241
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+++S L +N R +RL V N+P SA++++L+ F N L +G+ + + PC+ C
Sbjct: 242 PGGAVNSTALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSADPCVQC 299
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSG---------SILKIKRPKEFVEVASGEA 556
I + A +EF + DA+ AL DG + LKI+RPK+++ A E
Sbjct: 300 QISPDHSFAMLEFRNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKDYIVPAIVED 359
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP- 615
+ S IV DSP+KI + I LS + +ME++ AFG LK++ V + H E
Sbjct: 360 PNYDPDSEVPSSIVIDSPNKISVTNIPAYLSEEQIMELLVAFGKLKSFVL-VKDKHTEES 418
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP 673
AF EY D VT AI GLN + +G + L +A I +G + +A+
Sbjct: 419 RGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASY--GIQQVAGE-----LSVNAMS 471
Query: 674 LLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+L T V++L N+ + + + EE+ +DV+ EC +FG++ S+ +
Sbjct: 472 MLAGTTSLDGDVSRVVQLLNMVTADEL--MDNDDYEEIRDDVQEECEKFGTIVSLKI 526
>gi|85111663|ref|XP_964044.1| hypothetical protein NCU03039 [Neurospora crassa OR74A]
gi|28925805|gb|EAA34808.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 584
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 172/357 (48%), Gaps = 42/357 (11%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+ + + A + +
Sbjct: 192 KRRMTQWDIKPPGYGNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMTQ 241
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+++S L +N R +RL V N+P SA++++L+ F N L +G+ + + PC+ C
Sbjct: 242 PGGAVNSAALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSADPCVQC 299
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSG---------SILKIKRPKEFVEVASGEA 556
I + A +EF + DA+ AL DG + LKI+RPK+++ A E
Sbjct: 300 QISPDHSFAMLEFRNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKDYIVPAIVED 359
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP- 615
+ S IV DSP+KI + I LS + +ME++ AFG LK++ V + H E
Sbjct: 360 PNYDPDSEVPSSIVIDSPNKISVTNIPAYLSEEQIMELLVAFGKLKSFVL-VKDKHTEES 418
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP 673
AF EY D VT AI GLN + +G + L +A I +G + +A+
Sbjct: 419 RGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASY--GIQQVAGE-----LSVNAMS 471
Query: 674 LLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+L T V++L N+ + + + EE+ +DV+ EC +FG++ S+ +
Sbjct: 472 MLAGTTSLDGDVSRVVQLLNMVTADEL--MDNDDYEEIRDDVQEECEKFGTIVSLKI 526
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 146/274 (53%), Gaps = 22/274 (8%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ +E+ L +F N+ ++ + P + EK AFVEF +AED
Sbjct: 29 RRLYIGSITPEVNEQNLADFFNSKMIEMSIGTGGPGNPVLAVQCNYEKNYAFVEFRSAED 88
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF--VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
A+AA+ DG F LKI+RPK++ +E+AS V VS V DS +KIF+GG
Sbjct: 89 ATAAMAFDGIIFINGPLKIRRPKDYGGMEIAS----PGVHVPGVVSTNVPDSINKIFVGG 144
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGLK 638
+ L+ + VME++ +FG LKA++ V E+ P AF EYVD VT AI LNG++
Sbjct: 145 LPTYLNEEQVMELLKSFGDLKAFNL-VRENGNGPSKGFAFFEYVDVGVTDVAIQSLNGME 203
Query: 639 VGGQVLTAVQAVLDGSIMDNSGNPP------FHGIPKHALPLLKKP---TEVLKLKNVFN 689
+G + L VQ G+ G P F IP+ +P K P + +L + N+
Sbjct: 204 LGDRYLV-VQRASVGAKPGTPGMIPNLPYDQFPEIPRPIMPAGKDPATDSRILLMLNMVT 262
Query: 690 PEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P+ + + E ++ EDV+ EC+ +G+V+ + +
Sbjct: 263 PDDLT--DDQEYGDLYEDVKEECSNYGAVEDLRI 294
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 191/402 (47%), Gaps = 53/402 (13%)
Query: 377 KTPSPINRSP----EKKSAKWDV-AP-VETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
++P+P + P ++K++ WDV AP E Y T+ QA + + P +
Sbjct: 36 RSPTPPSAVPISQRKRKASGWDVHAPGYEQY-------TAMQAKQTGLFNL----PGANR 84
Query: 431 TQKP--LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL 488
TQ P LA + + + M +R RRL + ++ +E+ L EF N +
Sbjct: 85 TQIPPILAIPGLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITPDINEQNLAEFFNGKM 144
Query: 489 LSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
+ P + EK AFVEF +AEDA+AA+ DG F LKI+RPK++
Sbjct: 145 KEMDIGTGAPGNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKIRRPKDY 204
Query: 549 VEVASGEAEKSVASVDSVSGI----VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
+A + V G+ V DS +K+F+GG+ L+ + VME++ +FG LKA+
Sbjct: 205 ------GGPDVLAPMMHVPGVVSTNVPDSANKVFVGGLPMYLNEEQVMELLKSFGELKAF 258
Query: 605 HFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-----SIM 656
+ V E+ P AF EYVD VT AI L+G+++G + L +A + I
Sbjct: 259 NL-VRENGNGPSKGFAFFEYVDPSVTDVAIQSLSGMELGDKYLVVQRASVGAKPGQSPID 317
Query: 657 DNSGNPPFHGIPKHALP---LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECA 713
+ G+P IP+ +P + + +L + N+ PE + E ++ ED+ EC
Sbjct: 318 EMYGSP--APIPRPIMPATDIDSTQSRILLMLNMVVPEELQ--DDQEYADIYEDITEECG 373
Query: 714 RFGSVKSVNV--------VKYGDSNISTIQACEGNENTASAG 747
R+G+V+ + + K+G++ + + +A + + A G
Sbjct: 374 RYGAVEDLRIPRPVKRDKAKWGENGMDSARAAQLADEAAGVG 415
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 62/384 (16%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 189 TPPPKKREPTPDLTDVVSVLERKRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA 243
Query: 425 DPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A +A+ + + + L SN R +RL V N+P E+ ++ F
Sbjct: 244 -----PRQQPMDPSKLQAFMAQPSGQVTNAALKPSNSRQSKRLLVHNIPADTKEETIVSF 298
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI---- 539
N L +G+ + GS P I + ++ A +EF T DA+ AL DG + G+
Sbjct: 299 FN--LQLNGLNVIEGSDPLISAQVSKDGSFALLEFKTQSDATVALALDGITMDGNDHMET 356
Query: 540 ---------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKM 590
L I+RPK+++ A + V +S +V D+ +KI + I L+ +
Sbjct: 357 GNGSADTRGLSIRRPKDYIVPAVTDETPFEPGV--ISNVVADTQNKISVTNIPHYLNDEQ 414
Query: 591 VMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 648
V E++ +FG LKA+ + N D AF EYVD T A+ GLNG+++G + L +
Sbjct: 415 VTELLVSFGELKAFVLVKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQR 474
Query: 649 AVLDGSIMDNSGNPPFHGIPK--HALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
A + GN G+ +A+ +L T VL+L N+ PE +
Sbjct: 475 ASI--------GNTQVSGLEMSVNAMSMLAGTTSQDLENGRVLQLLNMVTPEEL--IDNE 524
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ EDV+ EC ++G V + V
Sbjct: 525 DYEEICEDVKEECEKYGKVLEMKV 548
>gi|13938661|gb|AAH07487.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Mus
musculus]
Length = 306
Score = 125 bits (313), Expect = 2e-25, Method: Composition-based stats.
Identities = 87/251 (34%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
Query: 481 MEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSIL 540
M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F G L
Sbjct: 1 MDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSL 59
Query: 541 KIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGP 600
KI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++ +FGP
Sbjct: 60 KIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGP 119
Query: 601 LKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL--DGSIM 656
LKA++ + + AF EYVD VT +AIAGLNG+++G + L +A + + +
Sbjct: 120 LKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATL 179
Query: 657 DNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLEC 712
P G+ + + PTEVL L N+ PE L + E EE++EDVR EC
Sbjct: 180 STINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDEC 237
Query: 713 ARFGSVKSVNV 723
+++G VKS+ +
Sbjct: 238 SKYGLVKSIEI 248
>gi|154319442|ref|XP_001559038.1| hypothetical protein BC1G_02202 [Botryotinia fuckeliana B05.10]
Length = 596
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 62/384 (16%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 179 TPPPKKREPTPDLTDVVSVLERKRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA 233
Query: 425 DPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A +A+ + + + L SN R +RL V N+P E+ ++ F
Sbjct: 234 -----PRQQPMDPSKLQAFMAQPSGQVTNAALKPSNSRQSKRLLVHNIPADTKEETIVSF 288
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI---- 539
N L +G+ + GS P I + ++ A +EF T DA+ AL DG + G+
Sbjct: 289 FN--LQLNGLNVIEGSDPLISAQVSKDGSFALLEFKTQSDATVALALDGITMDGNDHMET 346
Query: 540 ---------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKM 590
L I+RPK+++ A + V +S +V D+ +KI + I L+ +
Sbjct: 347 ENGSADTRGLSIRRPKDYIVPAVTDETPFEPGV--ISNVVADTQNKISVTNIPHYLNDEQ 404
Query: 591 VMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 648
V E++ +FG LKA+ + N D AF EYVD T A+ GLNG+++G + L +
Sbjct: 405 VTELLVSFGELKAFVLVKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQR 464
Query: 649 AVLDGSIMDNSGNPPFHGIPK--HALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
A + GN G+ +A+ +L T VL+L N+ PE +
Sbjct: 465 ASI--------GNTQVSGLEMSVNAMSMLAGTTSQDLENGRVLQLLNMVTPEEL--IDNE 514
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ EDV+ EC ++G V + V
Sbjct: 515 DYEEICEDVKEECEKYGKVLEMKV 538
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 171/357 (47%), Gaps = 42/357 (11%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+ + + A + +
Sbjct: 202 KRRMTQWDIKPPGYGNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMTQ 251
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+++S L +N R +RL V N+P SA++++L+ F N L +G+ + PC+ C
Sbjct: 252 PGGTVNSTALKPTNSRQSKRLIVSNIPPSATDESLLGFFN--LQLNGLNVIDSVDPCVQC 309
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI---------LKIKRPKEFVEVASGEA 556
I + A VEF + DA+ AL DG + LKI+RPK+++ A E
Sbjct: 310 QISPDHSFAMVEFRNSPDATVALALDGITMEADDANDAASAGGLKIRRPKDYIVPAIVED 369
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP- 615
+ S IV DSP+KI + I L+ + +ME++ AFG LK++ V + H E
Sbjct: 370 PNYDPDSEVPSNIVIDSPNKISVTNIPAYLTEEQIMELLVAFGKLKSFVL-VKDKHTEES 428
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP 673
AF EY D VT AI GLN + +G + L +A I +G + +A+
Sbjct: 429 RGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKASY--GIQQVAGE-----LSVNAMS 481
Query: 674 LLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+L T V++L N+ + + + EE+ +DV+ EC +FG++ S+ +
Sbjct: 482 MLAGTTSLDGDVSRVVQLLNMVTADEL--MDNDDYEEIRDDVQEECEKFGTIVSLKI 536
>gi|295663747|ref|XP_002792426.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279096|gb|EEH34662.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 567
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 198/436 (45%), Gaps = 92/436 (21%)
Query: 361 GLGGYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNV 407
GG RKR + +P P R P +++ +WD+ P P
Sbjct: 135 AFGGGRDRKR-----SASPPPKKREPTPDLTDVVPILERKRRLTQWDIKP------PGYE 183
Query: 408 H-TSNQAASSNAHEMVSS------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQ 458
H T+ QA S + + DP + + +P+ GIS + L N
Sbjct: 184 HVTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFMNQPVPGISTNTVLRPSN---------- 233
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
+R +RL V N+P SA+E++L++F N L +G+ + G PC+ + +++ +EF
Sbjct: 234 -SRQAKRLFVHNIPPSATEESLVQFFN--LQLNGLNVIKGVDPCVSAQLSKDRSFGLLEF 290
Query: 519 LTAEDASAALCCDGCSF---------------SGSILKIKRPKEFVEVASGEAEKSVASV 563
++ DA+ AL DG + S L ++RPK+++ GE E V
Sbjct: 291 KSSADATVALAFDGITMEDTGDMDTSNGEANGSNQGLSLRRPKDYILPVGGEEEPHREGV 350
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEY 621
VS +V D+P+KI + I + + V ++ +FG LK++ + + E AF EY
Sbjct: 351 --VSNVVPDTPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKDSETGESRGIAFCEY 408
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-- 679
+D + T A+ LNG+++G + L V+A + G+I + GI +A+ + K T
Sbjct: 409 LDPMSTDIAVENLNGMELGNKRLKVVRASI-GTIQATGLD---MGI--NAMSMYAKTTSQ 462
Query: 680 -----EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTI 734
VL+L N+ + L + EE+ +DVR EC+++G V + V +
Sbjct: 463 DIEAGRVLQLLNMVTTDEL--LDNDDYEEICDDVRDECSKYGQVVELKVPR--------- 511
Query: 735 QACEGNENTASAGVGQ 750
GN N SAGVG+
Sbjct: 512 --PTGN-NKQSAGVGK 524
>gi|325191172|emb|CCA25959.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 553
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 158/320 (49%), Gaps = 33/320 (10%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
+ Q R RR+ V + +E + F N+ + + + G + I RE+ AF
Sbjct: 207 MAQQTRHARRIYVGGIG-EVNETEISAFFNDVIDRALGERQEGGA-VVSVYINRERHFAF 264
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEF----VEVASGEAEK-SVASVDSVSGIV 570
VE + E +A + DG +F G LK++RP ++ V G ++A++ VS V
Sbjct: 265 VELKSIELTTACMNLDGIAFRGQPLKVRRPNDYNPGLVPKDLGPIPALNLAALGIVSTTV 324
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
+D P K+FIGGI L+ + + E++ AFGPLK++H ++ + + AF EY+D VT
Sbjct: 325 QDGPGKVFIGGIPYHLTEEQIKELLQAFGPLKSFHLVKDLTTNLSKGYAFCEYMDSGVTD 384
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDGS--IMDNSGNPPFHGI-----PKHA---------- 671
A GLN +K+G + LT +A+ S ++ N+ G+ P A
Sbjct: 385 AACIGLNDMKLGDRTLTVRRALSQESAKVIANAAGTVNAGVEMGLDPSRAAMQTISMAGV 444
Query: 672 -LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK----Y 726
L + P+ VL L+N+ PE E E ++++D+R EC R+G V ++ + + Y
Sbjct: 445 HLGPIGSPSRVLVLRNMVTPEELE--DEDEYRDIMDDIRSECERYGRVTTIILPRAKEGY 502
Query: 727 GDSNISTIQACEGNENTASA 746
GD + + G+ +T+ A
Sbjct: 503 GDEALGKVYIEFGDISTSQA 522
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 39/347 (11%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K++ WDV P + Y + V AS EM + PL+G + A+
Sbjct: 104 KRNTLWDVPP-KGYEDITPVQFKALRASGQV-EMPT----------PLSGGVIPATALP- 150
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
Q Q RRL NLP +E +++F N + S + G+ P + C I
Sbjct: 151 -------QGAQMTMQARRLYCGNLPFGITEDLMVDFFNAKMRESDMARQPGN-PVLACQI 202
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEV--ASGEAEKSVASVDS 565
EK AF+EF + E+ + A+ DG G LKI+RPK++ + +G A ++ +
Sbjct: 203 NLEKNFAFLEFRSVEETTLAMAFDGIILQGQALKIRRPKDYQPIPGINGMAYPTLFAESQ 262
Query: 566 -------VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPC 616
VS +V D+ +K+F+GG+ L+ V E++ FG L+A++ + +
Sbjct: 263 ATHIPGVVSTVVSDTINKVFVGGLPNYLNEDQVKELLSTFGELRAFNLVKDSATGLSKGY 322
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK 676
AF EYVD +T AIAG+NG+++G + L +A + M N P + K
Sbjct: 323 AFCEYVDIGITDVAIAGMNGMQLGDKKLIVQRASVGSKTMTAQLNIPGFDLNKEI----- 377
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
T +L L N+ E + + + +E+ ED+R EC+++G ++S+ +
Sbjct: 378 TATNILCLMNMVVAE--ELMDDEDYDEIFEDIREECSKYGRIRSMQI 422
>gi|410054709|ref|XP_003954504.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa subunit
[Pan troglodytes]
Length = 394
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 139/254 (54%), Gaps = 11/254 (4%)
Query: 478 KALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG 537
+A+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F G
Sbjct: 86 EAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQG 144
Query: 538 SILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCA 597
LKI+RP ++ + SV VS +V DS HK+FIGG+ L+ V E++ +
Sbjct: 145 QSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTS 204
Query: 598 FGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG-- 653
FGPLKA++ + + AF EYVD VT +AIAGLNG+++G + L +A +
Sbjct: 205 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKN 264
Query: 654 SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVR 709
+ + P G+ + + PTEVL L N+ PE L + E EE++EDVR
Sbjct: 265 ATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVR 322
Query: 710 LECARFGSVKSVNV 723
EC+++G VKS+ +
Sbjct: 323 DECSKYGLVKSIEI 336
>gi|340780291|pdb|2YH0|A Chain A, Solution Structure Of The Closed Conformation Of Human
U2af65 Tandem Rrm1 And Rrm2 Domains
gi|340780292|pdb|2YH1|A Chain A, Model Of Human U2af65 Tandem Rrm1 And Rrm2 Domains With
Eight-Site Uridine Binding
Length = 198
Score = 123 bits (308), Expect = 6e-25, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 3/188 (1%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+EF + ++
Sbjct: 5 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDE 63
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
+ A+ DG F G LKI+RP ++ + SV VS +V DS HK+FIGG+
Sbjct: 64 TTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLP 123
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGLNG+++G
Sbjct: 124 NYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGD 183
Query: 642 QVLTAVQA 649
+ L +A
Sbjct: 184 KKLLVQRA 191
>gi|261196608|ref|XP_002624707.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595952|gb|EEQ78533.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609528|gb|EEQ86515.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ER-3]
gi|327350238|gb|EGE79095.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 570
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 194/429 (45%), Gaps = 74/429 (17%)
Query: 361 GLGGYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNV 407
LGG RKR + +P P R P +++ +WD+ P P
Sbjct: 134 ALGGGRERKR-----SASPPPKKREPTPDLTDVVPILERKRRLTQWDIKP------PGYE 182
Query: 408 H-TSNQAASSNAHEMVSSDPVTSTTQKPL-AGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
H T+ QA S + + + L A I ++ S ++V ++R +R
Sbjct: 183 HVTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFIHPPTTITAPGSSTNTVLKPSNSRQAKR 242
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDAS 525
L V NLP SA+E+ L++F N L +G+ + G PC+ + R+K A +EF A D +
Sbjct: 243 LFVHNLPPSATEERLVQFFN--LQLNGLNVIKGVDPCLSAQLSRDKTFALLEFRNAADTT 300
Query: 526 AALCCDGCSF--SGSI-------------LKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
AL DG + SG + L I+RPK+++ ++ E E V VS +V
Sbjct: 301 VALAFDGITMEDSGEMDTSNGDVDGPSQGLSIRRPKDYILPSAVEEEPQQEGV--VSNVV 358
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTP 628
DSP+KI + I + + V ++ +FG LK++ + + E AF EY+D T
Sbjct: 359 PDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFILVKDSETGESRGIAFCEYLDPTSTE 418
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EV 681
A+ LNG+++G + L V+A S+ G+ +A+ + K T V
Sbjct: 419 IAVENLNGMELGNKRLKVVRA----SVGTTQAAGLDMGV--NAMSMYAKTTSQDIEASRV 472
Query: 682 LKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNE 741
L+L N+ E + + EE+ +DVR EC+++G V + V + GN
Sbjct: 473 LQLLNMVTTEEL--MDNDDYEEICDDVRDECSKYGEVVELKVPR-----------PTGN- 518
Query: 742 NTASAGVGQ 750
N SAGVG+
Sbjct: 519 NKQSAGVGK 527
>gi|225677913|gb|EEH16197.1| splicing factor U2AF 65 kDa subunit ) [Paracoccidioides
brasiliensis Pb03]
gi|226287345|gb|EEH42858.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 567
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 198/435 (45%), Gaps = 92/435 (21%)
Query: 362 LGGYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVH 408
GG RKR + +P P R P +++ +WD+ P P H
Sbjct: 136 FGGGRDRKR-----SASPPPKKREPTPDLTDVVPILERKRRLTQWDIKP------PGYEH 184
Query: 409 -TSNQAASSNAHEMVSS------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQS 459
T+ QA S + + DP + + +P+ G S++ L N
Sbjct: 185 VTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFMNQPVPGTSINTVLRPSN----------- 233
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R +RL V N+P SA+E++L++F N L +G+ + G PC+ + +++ +EF
Sbjct: 234 SRQAKRLFVHNIPPSATEESLVQFFN--LQLNGLNVIKGVDPCVSAQLSKDRSFGLLEFK 291
Query: 520 TAEDASAALCCDGCSF---------------SGSILKIKRPKEFVEVASGEAEKSVASVD 564
++ DA+ AL DG + S L ++RPK+++ GE E V
Sbjct: 292 SSADATVALAFDGITMEDTGDMDTSNGEANGSNQGLSLRRPKDYILPVGGEEEPHREGV- 350
Query: 565 SVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYV 622
VS +V D+P+KI + I + + V ++ +FG LK++ + + E AF EY+
Sbjct: 351 -VSNVVPDTPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKDSETGESRGIAFCEYL 409
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT--- 679
D + T A+ LNG+++G + L V+A + G+I + GI +A+ + K T
Sbjct: 410 DPMSTDIAVENLNGMELGNKRLRVVRASI-GTIQATGLD---MGI--NAMSMYAKTTSQD 463
Query: 680 ----EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQ 735
VL+L N+ + L + EE+ +DVR EC+++G V + V +
Sbjct: 464 IEAGRVLQLLNMVTTDEL--LDNDDYEEICDDVRDECSKYGQVVELKVPR---------- 511
Query: 736 ACEGNENTASAGVGQ 750
GN N SAGVG+
Sbjct: 512 -PTGN-NKQSAGVGK 524
>gi|358391563|gb|EHK40967.1| hypothetical protein TRIATDRAFT_135674 [Trichoderma atroviride IMI
206040]
Length = 558
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 169/355 (47%), Gaps = 35/355 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P Y ++ T+ QA S + + Q+P+ + A + +
Sbjct: 163 KRRLTQWDIKP-PGY----DLVTAEQAKLSGMFPLPGA-----PRQQPMDPTKLQAFITQ 212
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S L SN R +RL V N+P A E AL+ F N L +G+ + S PC+ C
Sbjct: 213 PGGQVTSAGLKASNSRQAKRLLVSNVPSGAGEDALISFFN--LQLNGLNVIESSDPCVLC 270
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSG------------SILKIKRPKEFVEVAS 553
++ A +EF A DA+ AL DG S S L I+RPK++V A
Sbjct: 271 QFSADRAFAVLEFRNASDATVALALDGISMEADDAMNGTADGVSSGLNIRRPKDYVMPAL 330
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 613
+ V +S +V D+ HK+ I I L+ + V+E++ AFG KA+ ++ E
Sbjct: 331 PDEMPFDPEV--ISNVVPDTVHKLCITNIPSFLTEEQVIELLAAFGKPKAFVLVKDQSTE 388
Query: 614 EP--CAFIEYVD-QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIP 668
E AF EY++ A+ LNG+ VGG+ L +A + + + N G G+
Sbjct: 389 ESRGIAFTEYLEPSSANEPALNSLNGMDVGGKKLKVTKASIGPTQVANFDVGITAISGLA 448
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+++ + V++L N+ PE + + EE+ EDV+ ECA+FG V + V
Sbjct: 449 SQTSNDIER-SSVIQLLNMVTPEEL--IDNDDYEEICEDVQDECAKFGKVVELKV 500
>gi|336381013|gb|EGO22165.1| hypothetical protein SERLADRAFT_371639 [Serpula lacrymans var.
lacrymans S7.9]
Length = 381
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 143/278 (51%), Gaps = 30/278 (10%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ +E+ L +F N+ ++ + P + EK AFVEF +AED
Sbjct: 21 RRLYIGSITPDVNEQNLADFFNSKMIEMSIGTGAPGNPVLAVQCNYEKNYAFVEFRSAED 80
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV---DSVSGIVKDSPHKIFIG 580
A+AA+ DG F LKI+RPK++ G + S SV VS V DS +K+F+G
Sbjct: 81 ATAAMAFDGIIFINGPLKIRRPKDY-----GGVDMSAPSVHVPGVVSTNVPDSINKVFVG 135
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGL 637
G+ L+ + VME++ +FG LKA++ V E+ P AF EYVD VT AI LNG+
Sbjct: 136 GLPTYLNEEQVMELLKSFGELKAFNL-VRENGNGPSKGFAFFEYVDISVTDVAIQSLNGM 194
Query: 638 KVGGQVLTAVQAVLDGSIMDNSGNP------PFHGIPKHALPLLK------KPTEVLKLK 685
++G + L +A S+ G P P+ P+ P++ +L +
Sbjct: 195 ELGDRYLVVQRA----SVGAKPGTPGMIPNLPYDQFPEIPRPIMPAGENSSADARILLML 250
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ P+ + + E ++ EDV+ EC+ +G+V+ + +
Sbjct: 251 NMVTPDDLT--DDQEYGDLYEDVKEECSVYGAVEDLRI 286
>gi|116192501|ref|XP_001222063.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
gi|88181881|gb|EAQ89349.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
Length = 566
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 182/395 (46%), Gaps = 56/395 (14%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
++ +WD+ P +V T+ QA S + + Q+ + + A + +
Sbjct: 171 RRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMNQP 220
Query: 448 NVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
+++S L SN R +RL + NLP S ++++L F N L +G+ + + PC+
Sbjct: 221 GGAVNSAALKPSNSRQSKRLIISNLPASVTDESLTNFFN--LQLNGLNVIETADPCLQAH 278
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSF----------SGSI---LKIKRPKEFVEVAS 553
I E+ A VEF DA+ AL DG S +G+ L I+RPK+++ A
Sbjct: 279 IAAERAFAMVEFRNNTDATVALALDGISMEADDAHAANGNGTAPQGLHIRRPKDYIVPAV 338
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 613
E D S +V DSP+KI + + L+ VME++ +FG LK++ + E
Sbjct: 339 VEDPNYDPDSDRPSSVVVDSPNKISVTNLPLYLTEDQVMELLVSFGKLKSFVLVKDNGTE 398
Query: 614 EP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHA 671
E AF+EY D VT AI GL+ + +G + L +A + I SG G+ +A
Sbjct: 399 ESRGIAFLEYADPGVTTVAIQGLHNMMLGERALKVQKASI--GITQVSGE---MGV--NA 451
Query: 672 LPLLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
+ +L T VL+L N+ P+ + + EE+ +DV+ EC +FG + S+ +
Sbjct: 452 MSMLAGTTSADAGAGRVLQLLNMVTPDEL--MDNDDYEEIRDDVQEECEKFGKILSIKIP 509
Query: 725 KYGDSNISTIQACEGNENTASAGVGQNLTNDETNE 759
+ + SAGVG+ ET E
Sbjct: 510 R------------PAGGSRQSAGVGKIFIKFETPE 532
>gi|219116422|ref|XP_002179006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409773|gb|EEC49704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 17/283 (6%)
Query: 458 QSNRPMRRLCVENLPLSASEKAL-MEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
Q R RRL V NLP +E A+ +EF ++S P + I E+ FV
Sbjct: 2 QQTRHARRLYVGNLPPHITEDAIHVEFRRAIEIASPTPLSED--PVLSTYINHERRFCFV 59
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS------VASVDSVSGIV 570
EF T E A+A + DG G +K+KRP ++ + + S V+ + VSG V
Sbjct: 60 EFKTVEMATACMNLDGLHVQGVPVKVKRPNDYNANMAPKIHPSALPPLDVSKLGIVSGTV 119
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE---DHEEPCAFIEYVDQLVT 627
+D P+KIFIGG+ L VME++ AFG +KA+H N+ + + F+EY D +T
Sbjct: 120 EDGPNKIFIGGLHYHLQDSQVMELLQAFGKIKAFHLVSNDPESNMSKGYCFVEYADPNIT 179
Query: 628 PKAIAGLNGLKVG-GQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKN 686
P A+ GLNG+ +G G+ LTA A + P++ +P PT VL L N
Sbjct: 180 PIAVQGLNGMDIGNGKALTARLAGDRTGGAGGAAFLAHAMDPQNGVP--NIPTRVLVLHN 237
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDS 729
+ E + ++ E + + ++V+ ECA+FG ++ + + + G +
Sbjct: 238 MVTDEDLA--TDTEYQGLFDEVKDECAKFGRLERLEIPRQGPA 278
>gi|322693990|gb|EFY85833.1| splicing factor, putative [Metarhizium acridum CQMa 102]
Length = 584
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 166/354 (46%), Gaps = 34/354 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P V T+ QA S + + Q+P+ + A + +
Sbjct: 179 KRRMTQWDIKPPGYELV-----TAEQAKLSGMFPLPGA-----PRQQPMDPTKLQAFMKE 228
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
N + S L SN R +RL V N+P SE++L+ F N L +G+ + S PC C
Sbjct: 229 PNGGVSSAGLKASNSRQAKRLIVSNIPQGNSEESLISFFN--LQLNGLNVIESSDPCNLC 286
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSG-----------SILKIKRPKEFVEVASG 554
++ A +EF A DA+ AL DG + L I+RPK++V A
Sbjct: 287 QFSTDRSFAVLEFRNAGDATVALALDGINMEADDTMNGDGGEKQGLSIRRPKDYVMPAI- 345
Query: 555 EAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEE 614
E+ + VS +V D+ HK+ I I L+ ++E++ AFG KA+ + EE
Sbjct: 346 -PEEMAYDPNVVSNVVPDTVHKLSITNIPTFLTEDQIIELLAAFGKPKAFVLVKDRSTEE 404
Query: 615 P--CAFIEYVDQ-LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIPK 669
AF EY++ A++ LNG+ VGG+ L +A + + + N G G+
Sbjct: 405 SRGIAFAEYLEPGSANEPALSALNGMDVGGKKLKVAKASIGPTQVANFDVGITAISGLAS 464
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+K VL+L N+ PE + E EE+ EDVR EC++FG++ + +
Sbjct: 465 QTSTDAEK-GRVLQLLNMVTPEEL--MDTEEYEEICEDVREECSKFGNILELKI 515
>gi|171684585|ref|XP_001907234.1| hypothetical protein [Podospora anserina S mat+]
gi|170942253|emb|CAP67905.1| unnamed protein product [Podospora anserina S mat+]
Length = 585
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 177/363 (48%), Gaps = 53/363 (14%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
++ +WD+ P +V T+ QA S + + Q+ + + A +++
Sbjct: 191 RRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMSQP 240
Query: 448 NVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
+++S L +N R +RL + N+P SA++ +++ F N L +G+ + + PC+ C
Sbjct: 241 GGAVNSAALKPTNSRQAKRLILSNIPASATDDSIVNFFN--LQLNGLNVIEQTDPCLLCN 298
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSF------------SGSILKIKRPKEF-----V 549
I ++ A +EF DA+ AL DG + + + LKI+RPK++ V
Sbjct: 299 ISPDRSFAMLEFRNNTDATVALALDGITMDADDHQANGNGAAATGLKIRRPKDYIVPAIV 358
Query: 550 EVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
E + + + SV S + V G P+KI + I L+ VME++ +FG LK++ F +
Sbjct: 359 EDPNYDPDSSVPSTNVVDG-----PNKISVTNIPPYLTEDQVMELLVSFGKLKSFVFVKD 413
Query: 610 EDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGI 667
+EP AF+EY D VT AI+GLN + +G + L +A + I +G +
Sbjct: 414 NGTQEPRGIAFLEYADSSVTDVAISGLNNMMLGEKALKVQKASI--GITQVAGE-----L 466
Query: 668 PKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKS 720
+A+ +L T VL+L N+ + + + EE+ +DV+ EC +FG + S
Sbjct: 467 SVNAMSMLAGTTPSDNDAGRVLQLLNMVTADEL--MDNDDYEEIRDDVQEECEKFGKILS 524
Query: 721 VNV 723
+ +
Sbjct: 525 LKI 527
>gi|392589921|gb|EIW79251.1| hypothetical protein CONPUDRAFT_83522 [Coniophora puteana
RWD-64-598 SS2]
Length = 411
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 153/306 (50%), Gaps = 26/306 (8%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ +E+ L +F N ++ + P + EK AFVEF +AED
Sbjct: 52 RRLYIGSITPDVNEQNLADFFNGKMIEMSIGTGGPGNPVLAVQCNYEKNYAFVEFRSAED 111
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A+AA+ DG F LKI+RPK++ A V V VS V DS HKIF+GG+
Sbjct: 112 ATAAMAFDGIIFINGPLKIRRPKDYGGDAIMAPNFHVPGV--VSTNVPDSIHKIFVGGLP 169
Query: 584 RTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGLKVG 640
L+ + VME++ +FG LKA++ V E+ P AF EYVD VT AI LNG+++G
Sbjct: 170 PYLNEEQVMELLKSFGELKAFNL-VRENGNGPSKGFAFFEYVDSSVTDVAIQSLNGMELG 228
Query: 641 GQVLTAVQAVLDGSIMDNSGNPP------FHGIPKHALPLLKKPTEVLKLKNVFNPEGFS 694
+ L VQ G+ G P F IP+ +P TE ++ + N
Sbjct: 229 DRYLV-VQRASVGAKPGTPGMIPNLPYDQFPEIPRPIMPAGDGSTEDARILLMLNMVTVD 287
Query: 695 SLS-ELEVEEVLEDVRLECARFGSVKSVNVV--------KYGDSN-ISTIQACEGNENTA 744
L + E ++ EDV+ EC++ G+V+ + + K+GD+ S A +E
Sbjct: 288 DLQDDDEYGDIYEDVKEECSKHGAVEDLRIPRPIKKDKSKWGDAGQQSQTDAARADE--- 344
Query: 745 SAGVGQ 750
+AGVG+
Sbjct: 345 AAGVGR 350
>gi|195149862|ref|XP_002015874.1| GL11290 [Drosophila persimilis]
gi|194109721|gb|EDW31764.1| GL11290 [Drosophila persimilis]
Length = 487
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 162/369 (43%), Gaps = 62/369 (16%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WDV P E Y+ + + AS + SD +P A D
Sbjct: 73 WDVPP-EGYAHVTPMQYKAMQASGQITARIQSD------TQPTA---------------D 110
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNN-FLL---SSGVQHVHGSLPCIGCVIQ 508
+ + R RRL V N+P +E +M F N FLL G Q + C
Sbjct: 111 TAAIAMVTRQARRLYVGNIPFGVTEDDIMAFFNQQFLLLGDDCGGQLCLDGKAVLSCQAN 170
Query: 509 REKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV----- 563
+K AF+EF + ++A+ A DG SF G +LKI+RP ++ V S A S+
Sbjct: 171 LDKNFAFIEFRSMQEATQATTFDGISFRGQVLKIRRPHDYHPVGSVGAAAGAGSIPDAVG 230
Query: 564 ----------------------DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPL 601
++S +V DSPHKI+IGG+ L+ + E++ +FG L
Sbjct: 231 GCASSAAAKSRSSSADTGSLGSQAISNLVPDSPHKIYIGGLPTCLNETQIKELLLSFGQL 290
Query: 602 KAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNS 659
+ ++ + + + AF EYVD L+T + IA LNG+++G + L +++ G
Sbjct: 291 RGFNLVKDPSTTLSKGYAFFEYVDPLLTEQVIANLNGMQLGDRRLIVQRSIPSGRYAGIQ 350
Query: 660 GNP-PFHGIPKHAL----PLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECAR 714
P G+ +L L T+VL L N+ PE L E E++ D+ EC++
Sbjct: 351 QIPIQVPGLVATSLTGSTAGLNNATQVLCLLNMVLPEEL--LDNEEYEDIRADIEQECSK 408
Query: 715 FGSVKSVNV 723
+G V S+ +
Sbjct: 409 YGEVLSLKI 417
>gi|406867695|gb|EKD20733.1| U2 snRNP auxilliary factor [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 613
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 61/376 (16%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + A +++
Sbjct: 202 KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA-----PRQQPMDPSKLQAFMSQ 251
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S+ + L SN R +RL V NLP + +E+A++ F N L +G+ + GS PC+
Sbjct: 252 PSGSVTNAALKPSNSRQAKRLLVSNLPPTVNEEAIVNFFN--LQLNGLNVIEGSDPCVSA 309
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCS-----FSGSI-------LKIKRPKEFVEVAS 553
I ++K A +EF DA+ AL DG + +GS L I+RPK+++
Sbjct: 310 QISKDKTFALLEFKQTSDATIALALDGITMEDEHMNGSATNGDTQGLSIRRPKDYIVPTI 369
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNED 611
+ A V +S +V D+ +KI I I L+ + V E++ +FG LKA+ + D
Sbjct: 370 TDETPFEAGV--ISNVVVDTQNKISISNIPLYLTDEQVTELLVSFGELKAFVLVKDNGTD 427
Query: 612 HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK-- 669
AF EYVD + T A+ GLNG+++G + L +A + G+ G+
Sbjct: 428 ESRGIAFCEYVDPVATDIAVEGLNGMELGDKHLKVQRASI--------GHTQVSGLEMSV 479
Query: 670 HALPLLKKPT-------EVLKLKNVFNP---------EGFSSLSEL------EVEEVLED 707
+A+ +L T VL+L N+ P EG L+ L E+ ED
Sbjct: 480 NAMSMLAGTTSQGLEEGRVLQLLNMVTPEELIDNEDYEGTILLTTLIQSLLTMYPEICED 539
Query: 708 VRLECARFGSVKSVNV 723
V+ EC ++G V + V
Sbjct: 540 VKEECEKYGKVLDMKV 555
>gi|343426615|emb|CBQ70144.1| related to pre-mRNA splicing factor U2AF large chain [Sporisorium
reilianum SRZ2]
Length = 710
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 28/287 (9%)
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
+NR RRL V N+ +E ++ F N +L + G P + + +KG AFVEF
Sbjct: 334 ANRQARRLYVGNITHQTNEHNIVAFFNEQMLKLKLGTEPGE-PAVSAQVNVDKGYAFVEF 392
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI----VKDSP 574
++A+ A+ DG F LKI+RPK++ +G + +++ V G+ V DSP
Sbjct: 393 RHPDEATNAMSFDGIVFQAQSLKIRRPKDY----TGPDVRPPSNI-HVPGVISTNVPDSP 447
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIA 632
KIF+GG+ L+ V+E++ AFG L+A++ + + AF EYVD +T A
Sbjct: 448 FKIFVGGLPTYLTDDQVIELLQAFGELRAFNLVKDTGTGASKGFAFCEYVDTALTDLACQ 507
Query: 633 GLNGLKVGGQVLTAVQAVLD--------GSIMDNSGNPPFHGIPKHALPL------LKKP 678
GLNG+++G + L +A + + NSG +P +P
Sbjct: 508 GLNGMELGDRNLVVQRASVGSEKKAQALAATGANSGALGIAAVPSSVQQSAGEDGDAGEP 567
Query: 679 TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK 725
T + + N+ PE + E +++ED+R EC ++G+V V V +
Sbjct: 568 TSCMVMLNMVTPEELQ--DDEEYADIVEDIRDECTKYGAVTDVRVPR 612
>gi|346978171|gb|EGY21623.1| splicing factor U2AF 50 kDa subunit [Verticillium dahliae VdLs.17]
Length = 589
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 193/430 (44%), Gaps = 75/430 (17%)
Query: 365 YSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSN 411
++ R++R +A +P P R P +++ +WD+ P +V T+
Sbjct: 141 FARREQRPRSA--SPPPKKREPTPDLTDIVSVLDRKRRLTQWDIKPPGYENV-----TAE 193
Query: 412 QAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVEN 470
QA S + + Q+P+ + A + + +++S L SN R +RL V
Sbjct: 194 QAKLSGMFPLPGA-----PRQQPMDPTKLQAFMNQPG-TVNSASLKPSNSRQAKRLLVSK 247
Query: 471 LPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCC 530
LP SA+E ++ F N L +G+ + + PC+ C + +K VEF A +A+ AL
Sbjct: 248 LPSSATEDSVASFFN--LQLNGLNVIESTDPCVSCQLSNDKSFCVVEFRNASEATVALAL 305
Query: 531 DGCSF---------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
DG S +G L+I+RPK+++ A E V VS V D+P+K+ I G
Sbjct: 306 DGISMEADSATDGAAGRGLEIRRPKDYIVPAVTEELPYEPGV--VSSNVVDTPNKLSITG 363
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
L+ + V E++ +FG LKA+ + + D F EYVD AI GL+G+ +
Sbjct: 364 FPPYLTEEQVTELLTSFGELKAFVLVRDRHTDESRGFVFCEYVDSAANDVAIQGLSGMDL 423
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPK--HALPLLKKPT-------EVLKLKNVFNP 690
G L +A + G G+ A+ +L T VL+L N+
Sbjct: 424 GNSKLKIQKASI--------GVTQVAGVEMGVAAMSMLAGTTATDSEESRVLQLLNMVTA 475
Query: 691 EGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK-YGDSNISTIQACEGNENTASAGVG 749
+ + + EE++EDV+ ECA++G+V V V + G S SAGVG
Sbjct: 476 DEL--MDNEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSR-------------QSAGVG 520
Query: 750 QNLTNDETNE 759
+ ET E
Sbjct: 521 KIFVKYETKE 530
>gi|426244214|ref|XP_004015921.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Ovis aries]
Length = 471
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 33/354 (9%)
Query: 384 RSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGI 438
RSP + K WDV P + + + QAA Q P +
Sbjct: 79 RSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATAL 122
Query: 439 SVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV 496
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQA 182
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA 556
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 183 PGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE 241
Query: 557 EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEE 614
SV VS +V S HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 242 NPSVYVPGVVSTVVPGSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 301
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP-----FHGIPK 669
AF EYVD VT + + G L A + S ++ N G+
Sbjct: 302 GYAFCEYVDINVTDQVSPAPAHPALLGSPLRAGRGACSSSPFASTINQTPVTLQVPGLMS 361
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC ++G VKS+ +
Sbjct: 362 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECGKYGLVKSIEI 413
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 167/352 (47%), Gaps = 54/352 (15%)
Query: 388 KKSAKWDV--APVETYSVPSNVHTSNQAA-----SSNAHEMVSSDPVTSTTQKPLAGISV 440
++S++WDV P E NV+ S + S+ + M+ PV TTQ
Sbjct: 150 RRSSQWDVRKLPWEQSERDPNVNRSAYSVGGLDFSALSQYMI---PVAPTTQP------- 199
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQHVHGS 499
Q+ + RRL V NLP +E + +F N+ L L+ GV V G
Sbjct: 200 --------------NTQQATKHARRLYVGNLPSDVTESEVADFFNSALYLAKGVD-VPGD 244
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS 559
P + +K AF+E +A +A+AA+ DG F G L+++RP ++
Sbjct: 245 -PVQSVYLNLDKRFAFIELNSAAEAAAAIQMDGVLFRGMSLRMRRPNDYNPNIHAPVYPP 303
Query: 560 VASVDSVSGIVK----DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHE 613
+ S G+V D P K+FIGG+ L+ + EI+ ++GPL A++ + N
Sbjct: 304 IGFDPSALGVVSTQVPDGPDKVFIGGLPYHLTEDQIKEILSSYGPLNAFNLVKDPNTGLS 363
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA--VLDGSIMDNSGNPPFHGIPKHA 671
+ AF +Y D + AI GLNG+ +G + LT +A V GS+ + +
Sbjct: 364 KGYAFFQYKDPSIVEAAIKGLNGMTMGDKTLTVRRASQVSSGSVE----------LGQSF 413
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P ++ PT +L+L+N+ PE + + E E+++EDVR E +++G V V +
Sbjct: 414 SPTVRYPTRILELRNMVEPEEL--VDDEEYEDIIEDVREESSKYGEVTEVKI 463
>gi|328862941|gb|EGG12041.1| hypothetical protein MELLADRAFT_41759 [Melampsora larici-populina
98AG31]
Length = 397
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 150/296 (50%), Gaps = 35/296 (11%)
Query: 454 VQLTQS-NRPMRRLCVENLPLSASEKALMEFLN------NFLLSSGVQHVHGSL---PCI 503
V TQS R RRL V N+ +A+E + EF N L+ +G S+ P +
Sbjct: 23 VAQTQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLVRNGEDGSMISISENPVV 82
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ EK AFVEF AE+A+ + DG F LKI+RPK++ +G S +
Sbjct: 83 AVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDY----TGTEHTSTNHI 138
Query: 564 DS-VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH----EEPCAF 618
VS V DSP+KIFIGG+ L+ VME++ +FG LK+++ + + AF
Sbjct: 139 PGVVSTNVPDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGQVSKGFAF 198
Query: 619 IEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN-----------PPFHGI 667
EYVD +T A GLNG+++G + L +A + + N F+G
Sbjct: 199 CEYVDSDLTDIACQGLNGMELGDRYLVVQRAQIGQNAKKEKENAEGAGGAGMGVGGFNGT 258
Query: 668 PKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + + T+VL++ N+ NPE + + E +E+LED++ EC+++G ++ V +
Sbjct: 259 NRAS---EGERTKVLQMLNMVNPE--ELVDDEEYKEILEDIKEECSKYGQIEDVKI 309
>gi|346324367|gb|EGX93964.1| splicing factor u2af large subunit [Cordyceps militaris CM01]
Length = 583
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 174/381 (45%), Gaps = 55/381 (14%)
Query: 366 SPRKRRTEAAAKTPSPINRSP----EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEM 421
SP KRR TP + P +++ +WD+ P +V TS QA S +
Sbjct: 177 SPPKRRE----PTPDLTDIIPVLERKRRMTQWDIKPPGYEAV-----TSEQAKMSGMFPL 227
Query: 422 VSS------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPL 473
+ DP + + +P G SA L N +R RRL V ++P
Sbjct: 228 PGAPRQQQVDPTKLQALMNQPAGGQVSSAGLKANN-----------SRQARRLLVSDIPS 276
Query: 474 SASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGC 533
+E AL+ F N L +G+ + + PC C + +K A +EF DA+ AL DG
Sbjct: 277 GTTEDALVAFFN--LQLNGLNVIEATDPCALCQLSNDKSFAVLEFKNTGDATVALALDGS 334
Query: 534 SFSGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMV 591
S L I+RPK++V A ++ + + + VS V D+ HK+ I I L+ V
Sbjct: 335 SMVADTPGLSIRRPKDYVMPAV--PDEIIFNPEVVSNSVPDTIHKLCITNIPPFLTEDQV 392
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQL-VTPKAIAGLNGLKVGGQVLTAVQ 648
+E++ AFG KA+ EE AF EYV+ A+ LNG+ VGG+ L A +
Sbjct: 393 LELLAAFGKPKAFVLVKERSTEESRGIAFAEYVEPTNANEPALNTLNGMDVGGKKLKARK 452
Query: 649 AVLDGSIMDNSGNPPFHGIPKHALPLLK------KPTEVLKLKNVFNPEGFSSLSELEVE 702
A + G+ + N GI +A+ L T VL+L N+ E L + E
Sbjct: 453 ACVGGTQVANFD----AGI--NAISNLAGQGNGGDATRVLQLLNMVTAEEL--LDNDDYE 504
Query: 703 EVLEDVRLECARFGSVKSVNV 723
E+ EDVR EC+++G V V V
Sbjct: 505 EICEDVRDECSKYGKVLDVKV 525
>gi|336368252|gb|EGN96595.1| hypothetical protein SERLA73DRAFT_93106 [Serpula lacrymans var.
lacrymans S7.3]
Length = 396
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 143/278 (51%), Gaps = 30/278 (10%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ +E+ L +F N+ ++ + P + EK AFVEF +AED
Sbjct: 52 RRLYIGSITPDVNEQNLADFFNSKMIEMSIGTGAPGNPVLAVQCNYEKNYAFVEFRSAED 111
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV---DSVSGIVKDSPHKIFIG 580
A+AA+ DG F LKI+RPK++ G + S SV VS V DS +K+F+G
Sbjct: 112 ATAAMAFDGIIFINGPLKIRRPKDY-----GGVDMSAPSVHVPGVVSTNVPDSINKVFVG 166
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP---CAFIEYVDQLVTPKAIAGLNGL 637
G+ L+ + VME++ +FG LKA++ V E+ P AF EYVD VT AI LNG+
Sbjct: 167 GLPTYLNEEQVMELLKSFGELKAFNL-VRENGNGPSKGFAFFEYVDISVTDVAIQSLNGM 225
Query: 638 KVGGQVLTAVQAVLDGSIMDNSGNP------PFHGIPKHALPLLK------KPTEVLKLK 685
++G + L +A S+ G P P+ P+ P++ +L +
Sbjct: 226 ELGDRYLVVQRA----SVGAKPGTPGMIPNLPYDQFPEIPRPIMPAGENSSADARILLML 281
Query: 686 NVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
N+ P+ + + E ++ EDV+ EC+ +G+V+ + +
Sbjct: 282 NMVTPDDLT--DDQEYGDLYEDVKEECSVYGAVEDLRI 317
>gi|409081516|gb|EKM81875.1| hypothetical protein AGABI1DRAFT_70425 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 22/305 (7%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
R RRL + ++ +E+ L +F N + + P + EK AFVEF +
Sbjct: 18 RQSRRLYIGSITQEVNEQNLADFFNAKMAEMNIGTGITGNPVLAVQCNYEKNYAFVEFRS 77
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGIVKDSPHKI 577
AEDA+AA+ DG F LKI+RPK++ V+ G V S + V DS +K+
Sbjct: 78 AEDATAAMAFDGIIFINGPLKIRRPKDYGGDTIVSPGVHVPGVVSTN-----VPDSINKV 132
Query: 578 FIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLN 635
F+GG+ L+ + VME++ +FG LKA++ E + AF EYVDQ VT AI LN
Sbjct: 133 FVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGTGTSKGFAFFEYVDQAVTDVAIQSLN 192
Query: 636 GLKVGGQVLTAVQAVLDG-----SIMDNSGNPPFHGIPKHALPLLKKPTE----VLKLKN 686
G+++G + L +A + ++ N F IP+ +P K T +L + N
Sbjct: 193 GMELGDRYLVVQRASVGAKPGTPGMIPNLPYDQFPEIPRPIMPAGKDQTSSESRILLMLN 252
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK-YGDSNISTIQACEGNENTAS 745
+ PE + E ++ +DV+ EC+++G ++ + + + S++ A + +
Sbjct: 253 MVTPEDLH--EDDEYGDLYDDVKAECSKYGELEDLRIPRPVKKDKTSSMSAQDAQRIDEA 310
Query: 746 AGVGQ 750
AGVG+
Sbjct: 311 AGVGR 315
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 34/295 (11%)
Query: 452 DSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQRE 510
+S L +N R +RL V NLP SA+E++L+ F N L +G+ + + PC+ I +
Sbjct: 243 NSAALKPTNSRQAKRLVVRNLPPSATEESLVNFFN--LQLNGLNVIETTDPCLQAHIAPD 300
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSI------------LKIKRPKEFVEVASGEAEK 558
+ A +EF + +A+ AL DG S L+I RPK+++ A E
Sbjct: 301 RSFAMLEFRNSSEATVALAFDGISMDADDAGANGAEAVHGGLQITRPKDYIVPAVVEDPN 360
Query: 559 SVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--C 616
D S +V DSP+KI + I L+ VME++ +FG LK++ + +E
Sbjct: 361 YDPDSDVPSSVVIDSPNKISVANIPPYLNEDQVMELLVSFGKLKSFVLVKDNGTQESRGI 420
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK 676
AF+EYVD V+ AI GLN + +G Q L +A + I +G + +A+ +L
Sbjct: 421 AFLEYVDPSVSNVAIQGLNDMPLGEQKLKVKKASI--GITQVAGE-----MSVNAMSMLA 473
Query: 677 KPT--------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
T VL+L N+ PE + + EE+ EDV EC +FG+V S+ +
Sbjct: 474 GTTSTHAEASSRVLQLLNMVTPEEL--MDNDDYEEIREDVLEECKKFGNVLSLKI 526
>gi|302411252|ref|XP_003003459.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261357364|gb|EEY19792.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
Length = 568
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 194/430 (45%), Gaps = 75/430 (17%)
Query: 365 YSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSN 411
++ R++R +A +P P R P +++ +WD+ P +V T+
Sbjct: 145 FARREQRPRSA--SPPPKKREPTPDLTDIVSVLDRKRRLTQWDIKPPGYENV-----TAE 197
Query: 412 QAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVEN 470
QA S + + Q+P+ + A + + +++S L SN R +RL V
Sbjct: 198 QAKLSGMFPLPGA-----PRQQPMDPTKLQAFMNQPG-TVNSASLKPSNSRQAKRLLVSK 251
Query: 471 LPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCC 530
LP SA+E+++ F N L +G+ + + PC+ C + +K VEF A +A+ AL
Sbjct: 252 LPSSATEESVASFFN--LQLNGLNVIESTDPCVSCQLSNDKSFCVVEFRNASEATVALAL 309
Query: 531 DGCSF---------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
DG S +G ++I+RPK+++ A E V VS V D+P+K+ I G
Sbjct: 310 DGISMEADSGTDGAAGRGMEIRRPKDYIVPAVTEELPYEPGV--VSSNVVDTPNKLSITG 367
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
L+ + V E++ +FG LKA+ + + D F EYVD AI GL+G+ +
Sbjct: 368 FPPYLTEEQVTELLTSFGELKAFVLVRDRHTDESRGFVFCEYVDSAANDVAIQGLSGMDL 427
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPK--HALPLLKKPT-------EVLKLKNVFNP 690
G L +A + G G+ A+ +L T VL+L N+
Sbjct: 428 GNSKLKIQKASI--------GVTQVAGVEMGVAAMSMLAGTTATDSEESRVLQLLNMVTA 479
Query: 691 EGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK-YGDSNISTIQACEGNENTASAGVG 749
+ + + EE++EDV+ ECA++G+V V V + G S SAGVG
Sbjct: 480 DEL--MDNEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSR-------------QSAGVG 524
Query: 750 QNLTNDETNE 759
+ ET E
Sbjct: 525 KIFVKYETKE 534
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 183/400 (45%), Gaps = 56/400 (14%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+ + + A +
Sbjct: 171 KRRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGA-----PRQQAMDPTKLQAFMNH 220
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+++S L +N R +RL V NLP SA+E++L+ F N L +G+ + + PC+
Sbjct: 221 PGGAVNSAALKPTNSRQSKRLIVSNLPPSATEESLVNFFN--LQLNGLNVIETADPCLQA 278
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI-------------LKIKRPKEFVEVA 552
I ++ A +EF DA+ AL DG + L ++RPK+++ A
Sbjct: 279 HIAPDRSFAMLEFRHNTDATVALALDGITMEAEDADAANGNGAATQGLHLRRPKDYIVPA 338
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH 612
E D+ S +V DSP+KI + + L+ VME++ +FG LK++ +
Sbjct: 339 VVEDPNYDPDSDTPSSVVLDSPNKISVTNLPLYLTDDQVMELLVSFGKLKSFVLVKDNGT 398
Query: 613 EEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH 670
+E AF+EY D T A+ GLN + +G + L +A + I SG G+ +
Sbjct: 399 QESRGIAFLEYADPSATNVAVQGLNNMMLGERALKVQKASI--GITQVSGE---MGV--N 451
Query: 671 ALPLLKKP-------TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
A+ +L + VL+L N+ PE + + EE+ EDV+ EC +FG + S+ +
Sbjct: 452 AMSMLAGTMSADAGGSRVLQLLNMVTPEEL--MDNDDYEEIREDVQEECQKFGKILSLKI 509
Query: 724 VKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGER 763
+ G+ SAGVG+ ET E +
Sbjct: 510 PR----------PVGGSRQ--SAGVGKIYIKYETAESATK 537
>gi|398403643|ref|XP_003853288.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
gi|339473170|gb|EGP88264.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
Length = 544
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 139/287 (48%), Gaps = 34/287 (11%)
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
S R +RL V NLP SA++ +LM+F N L +G+ G+ PCI I + G A +EF
Sbjct: 212 SARQSKRLLVYNLPASATDDSLMDFFN--LQLNGLNVTKGADPCISANISQGNGYALLEF 269
Query: 519 LTAEDASAALCCDGCSFSGSI-------------LKIKRPKEF-VEVASGEAEKSVASVD 564
T EDA+ A+ DG + L+IKRPK++ V S E E +
Sbjct: 270 KTPEDATNAMAMDGIKMEADVDMGNGESNGTSKGLEIKRPKDYIVPTVSDETENTSG--- 326
Query: 565 SVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYV 622
S IV D+ +KI I I L + V+E++ +FG LK + ++ EE AF+EY
Sbjct: 327 LFSSIVPDTQNKISITNIPVYLQEEQVVELLTSFGQLKNFVLVKDKSTEESRGIAFVEYK 386
Query: 623 DQLVTPK-AIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTE- 680
D T K A+ LNG+ +G L A + I SG + L K T+
Sbjct: 387 DPDSTTKIALEALNGMDLGDAALKVKLASI--GIQQVSGE---MTVGAMGLIAGTKSTDA 441
Query: 681 ----VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
VL L N+ PE + E +E+LEDV+ ECA++G + V +
Sbjct: 442 DNGRVLCLMNMITPEEL--MDADEADEILEDVKEECAKYGELMEVKM 486
>gi|225562835|gb|EEH11114.1| splicing factor u2af large subunit [Ajellomyces capsulatus G186AR]
Length = 571
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 190/429 (44%), Gaps = 74/429 (17%)
Query: 361 GLGGYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNV 407
GG RKR + +P P R P +++ +WD+ P P
Sbjct: 135 AFGGGRERKR-----SASPPPKKREPTPDLTDVVPILERKRRLTQWDIKP------PGYE 183
Query: 408 H-TSNQAASSNAHEMVSSDPVTSTTQKPL-AGISVSASLAKLNVSMDSVQLTQSNRPMRR 465
H T+ QA S + + + L A I + S ++V ++R +R
Sbjct: 184 HVTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFIHPPTTSTAPGTSTNTVLKPSNSRQAKR 243
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDAS 525
L V NLP SA+E++L++F N L +G+ + G PC+ + +K A +EF A D +
Sbjct: 244 LFVHNLPSSATEESLVQFFN--LQLNGLNVIKGVDPCVTAQLSNDKTFALLEFRNAADTT 301
Query: 526 AALCCDGCSF---------------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
AL DG + S L I+RPK+++ ++ E E V VS +V
Sbjct: 302 VALAFDGITMEDNDDMDTTNGDSNGSNQGLSIRRPKDYILPSAVEGEPHQEGV--VSNVV 359
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTP 628
DSP+KI + I + + V ++ +FG LK++ + + E AF EY D + T
Sbjct: 360 PDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKDSETGESRGIAFCEYRDPMSTD 419
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EV 681
A+ LNG+++G + L V+A SI G+ +A+ + K T V
Sbjct: 420 IAVENLNGMELGNKKLKVVRA----SIGTTQAAGLDMGV--NAMSMYAKTTSQDIEASRV 473
Query: 682 LKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNE 741
L+L N+ E + + EE+ +DVR EC+++G V + V + GN
Sbjct: 474 LQLLNMVTTEEL--IDNDDYEEICDDVRDECSKYGEVVELKVPR-----------PTGN- 519
Query: 742 NTASAGVGQ 750
N SAGVG+
Sbjct: 520 NKQSAGVGK 528
>gi|240279650|gb|EER43155.1| splicing factor u2af large subunit [Ajellomyces capsulatus H143]
gi|325092783|gb|EGC46093.1| splicing factor u2af large subunit [Ajellomyces capsulatus H88]
Length = 572
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 191/431 (44%), Gaps = 77/431 (17%)
Query: 361 GLGGYSPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNV 407
GG RKR + +P P R P +++ +WD+ P P
Sbjct: 135 AFGGGRERKR-----SASPPPKKREPTPDLTDVVPILERKRRLTQWDIKP------PGYE 183
Query: 408 HTSNQAASSNAHEMVSSDP----VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPM 463
H + + A + + P V + + + S A S ++V ++R
Sbjct: 184 HVTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFIHPPTTTSTAP-GTSTNTVLKPSNSRQA 242
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
+RL V NLP SA+E++L++F N L +G+ + G PC+ + +K A +EF A D
Sbjct: 243 KRLFVHNLPSSATEESLVQFFN--LQLNGLNVIKGVDPCVTAQLSNDKTFALLEFRNAAD 300
Query: 524 ASAALCCDGCSF---------------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSG 568
+ AL DG + S L I+RPK+++ ++ E E + V VS
Sbjct: 301 TTVALAFDGITMEDNDEMDTTNGDSNGSNQGLSIRRPKDYILPSAVEGEPNQEGV--VSN 358
Query: 569 IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLV 626
+V DSP+KI + I + + V ++ +FG LK++ + + E AF EY D +
Sbjct: 359 VVPDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKDSETGESRGIAFCEYRDPMS 418
Query: 627 TPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT------- 679
T A+ LNG+++G + L V+A SI G+ +A+ + K T
Sbjct: 419 TDIAVENLNGMELGNKKLKVVRA----SIGTTQAAGLDMGV--NAMSMYAKTTSQDIEAS 472
Query: 680 EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEG 739
VL+L N+ E + + EE+ +DVR EC+++G V + V + G
Sbjct: 473 RVLQLLNMVTTEEL--IDNDDYEEICDDVRDECSKYGEVVELKVPR-----------PTG 519
Query: 740 NENTASAGVGQ 750
N N SAGVG+
Sbjct: 520 N-NKQSAGVGK 529
>gi|425775779|gb|EKV14031.1| Splicing factor u2af large subunit [Penicillium digitatum PHI26]
Length = 585
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 35/354 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + L
Sbjct: 206 KRRLTQWDMKPPGYENV-----TAEQAKISGMFPLPGA-----PRQQPMDPSRMKDFLNP 255
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
D+ L SN R +RL V N+P S A++ F N L +G+ VH PCI
Sbjct: 256 PTGDSDNAALKPSNSRQSKRLFVYNIPSGVSGDAVIAFFN--LQLNGLNVVHSVDPCISA 313
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGS---ILKIKRPKEFVEVASGEAEKSVAS 562
+ +K A +EF DA+ AL DG + + S L+++RPK+++ V G A + V +
Sbjct: 314 QVSEDKTFALLEFKDPNDATVALAFDGITMAESGDKGLEVRRPKDYI-VPDGSASQPVQA 372
Query: 563 VDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIE 620
V V DSP+KI I I ++ + ++ ++ +FG LK++ + EE AF E
Sbjct: 373 -GVVLNEVPDSPNKICISNIPTYINEEAIIMLLKSFGDLKSFVLVKDAATEESRGIAFYE 431
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK--- 677
YVD T A+ GLNG+++ + L V+A SI + G+ +A+ + K
Sbjct: 432 YVDPNNTALAVEGLNGMELVDRHLKFVRA----SIGTTQASGLDMGV--NAMQMFAKTTS 485
Query: 678 ----PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYG 727
T+VL+L N+ + L++ + EE++EDV EC++FG++ + + + G
Sbjct: 486 QDLETTQVLQLLNMVTLDEL--LNDEDYEEIMEDVSDECSKFGTILGIKIPRRG 537
>gi|425773483|gb|EKV11835.1| Splicing factor u2af large subunit [Penicillium digitatum Pd1]
Length = 585
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 35/354 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + L
Sbjct: 206 KRRLTQWDMKPPGYENV-----TAEQAKISGMFPLPGA-----PRQQPMDPSRMKDFLNP 255
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
D+ L SN R +RL V N+P S A++ F N L +G+ VH PCI
Sbjct: 256 PTGDSDNAALKPSNSRQSKRLFVYNIPSGVSGDAVIAFFN--LQLNGLNVVHSVDPCISA 313
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGS---ILKIKRPKEFVEVASGEAEKSVAS 562
+ +K A +EF DA+ AL DG + + S L+++RPK+++ V G A + V +
Sbjct: 314 QVSEDKTFALLEFKDPNDATVALAFDGITMAESGDKGLEVRRPKDYI-VPDGSASQPVQA 372
Query: 563 VDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIE 620
V V DSP+KI I I ++ + ++ ++ +FG LK++ + EE AF E
Sbjct: 373 -GVVLNEVPDSPNKICISNIPTYINEEAIIMLLKSFGDLKSFVLVKDAATEESRGIAFYE 431
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK--- 677
YVD T A+ GLNG+++ + L V+A SI + G+ +A+ + K
Sbjct: 432 YVDPNNTALAVEGLNGMELVDRHLKFVRA----SIGTTQASGLDMGV--NAMQMFAKTTS 485
Query: 678 ----PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYG 727
T+VL+L N+ + L++ + EE++EDV EC++FG++ + + + G
Sbjct: 486 QDLETTQVLQLLNMVTLDEL--LNDEDYEEIMEDVSDECSKFGTILGIKIPRRG 537
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 138/264 (52%), Gaps = 11/264 (4%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RR+ V N+P ++ L+EF N +L++ + +V P + C I K AF+EF T E+
Sbjct: 161 RRIYVGNIPPGITDSELIEFFNAAVLAANL-NVKPGPPVVFCQINAPKCFAFIEFRTPEE 219
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A+ A+ DG + LKI+RPK++ + S + + A V V DS HKIF+GG+
Sbjct: 220 ATNAMRFDGITLKNYTLKIRRPKDYQQ--SNDPTNTSALPTIVPTNVPDSEHKIFVGGLP 277
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
L+ + V ++ A+G LKA++ + N + AF EY+D VT +A A LNG+ +
Sbjct: 278 SNLNEEQVKTLLSAYGKLKAFNLVKDTNTGISKGYAFCEYLDPDVTDQACASLNGISLAD 337
Query: 642 QVLTAVQAVLDG----SIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLS 697
+ L +A + +I + P + ++ KP+ V++L N+ + E
Sbjct: 338 KNLIVQRASIVAQTLSTIRSTVPSSPTTSTTQTSIDNNTKPSRVIQLLNLVDKEDL--YD 395
Query: 698 ELEVEEVLEDVRLECARFGSVKSV 721
+ E + +L DV+ EC FG +S+
Sbjct: 396 DKEYDNILIDVKEECENFGPTQSL 419
>gi|154280004|ref|XP_001540815.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412758|gb|EDN08145.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 179/390 (45%), Gaps = 56/390 (14%)
Query: 387 EKKSAKWDVAPVETYSVPSNVH-TSNQAASSNAHEMVSSDPVTSTTQKPL-AGISVSASL 444
+++ +WD+ P P H T+ QA S + + + L A I +
Sbjct: 169 KRRLTQWDIKP------PGYEHVTAEQAKLSGMFPLPGAPRQQAVDPSRLQAFIHPPTTS 222
Query: 445 AKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
S ++V ++R +RL V NLP SA+E++L++F N L +G+ + G PC+
Sbjct: 223 TAPGTSTNTVLKPSNSRQAKRLFVHNLPSSATEESLVQFFN--LQLNGLNVIKGVDPCVT 280
Query: 505 CVIQREKGQAFVEFLTAEDASAALCCDGCSF---------------SGSILKIKRPKEFV 549
+ +K A VEF A D + AL DG + S L I+RPK+++
Sbjct: 281 AQLSNDKTFALVEFRNAADTTVALAFDGITMEDNDEMDTTNGNSNGSNQGLSIRRPKDYI 340
Query: 550 EVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
++ E E V VS +V DSP+KI + I + + V ++ +FG LK++ +
Sbjct: 341 LPSAVEGEPHQEGV--VSNVVPDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKD 398
Query: 610 EDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGI 667
+ E AF EY D + T A+ LNG+++G + L V+A SI G+
Sbjct: 399 SETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRA----SIGTTQAAGLDMGV 454
Query: 668 PKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKS 720
+A+ + K T VL+L N+ E + + EE+ +DVR EC+++G V
Sbjct: 455 --NAMSMYAKTTSQDIEASRVLQLLNMVTTEEL--IDNDDYEEICDDVRDECSKYGEVVE 510
Query: 721 VNVVKYGDSNISTIQACEGNENTASAGVGQ 750
+ V + GN N SAGVG+
Sbjct: 511 LKVPR-----------PTGN-NKQSAGVGK 528
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 178/380 (46%), Gaps = 47/380 (12%)
Query: 367 PRKRRTEAAAKTPSPINRSP----EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMV 422
P+KR TP N P +++ +WD+ P +V T+ QA S +
Sbjct: 159 PKKRE-----PTPDLTNIVPVLDRKRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLP 208
Query: 423 SSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALM 481
+ Q+P+ + A + + + S L +N R +RL V +P SE+ALM
Sbjct: 209 GA-----PRQQPMDPSKLQAFMNQPGGQVTSAGLKANNSRQSKRLLVSRIPSGTSEEALM 263
Query: 482 EFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI-- 539
F N L +G+ + + PC+ C ++ A +EF A +A+ AL DG S S
Sbjct: 264 SFFN--LQLNGLNVIDTTDPCVLCQFSNDRSFAVIEFKDAPEATVALAMDGISMEASDAS 321
Query: 540 ---------LKIKRPKEFVEVASGEAEKSVASVDS--VSGIVKDSPHKIFIGGISRTLSS 588
L+I+RP+++V A E S DS VS IV D+ +K+ I I L+
Sbjct: 322 NGTDGGHRGLEIRRPRDYVVPAVTEE----VSYDSEVVSNIVPDTVNKLSITNIPTFLTE 377
Query: 589 KMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVT-PKAIAGLNGLKVGGQVLT 645
+ ++E++ +FG KA+ + EE AF EY D + P A+ LNG+++GG+ L
Sbjct: 378 EQIIELLASFGKPKAFVLVKDRGTEESRGIAFAEYQDPAASNPTALDTLNGMEIGGKKLK 437
Query: 646 AVQAVLDGSIMDN--SGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEE 703
+A + + + N G G+ ++ + VL+L N+ E L + EE
Sbjct: 438 VSKASIGPTQVANFDVGITAISGLASQTANEVES-SRVLQLLNMVTAEEL--LDNDDYEE 494
Query: 704 VLEDVRLECARFGSVKSVNV 723
+ EDV+ EC++FG + V V
Sbjct: 495 ICEDVKEECSKFGKIIDVKV 514
>gi|361132025|gb|EHL03640.1| putative Splicing factor U2AF 50 kDa subunit [Glarea lozoyensis
74030]
Length = 568
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 51/363 (14%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
++ +WD+ P + Y NV T+ QA S + + Q+P+ + A +A+
Sbjct: 172 RRLTQWDIKP-QGYE---NV-TAEQAKLSGMFPLPGA-----PRQQPMDPSKLQAIMAQP 221
Query: 448 NVSMDSVQLTQSN-RPMRRLCVENLP-LSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S+ + L SN R +RL V NLP S SE+A++ F N L +G+ V GS PCI
Sbjct: 222 SGSVTNAALKPSNSRQAKRLLVHNLPSTSISEEAIINFFN--LQMNGLNIVEGSDPCISA 279
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI-------------LKIKRPKEFVEVA 552
I ++K A +EF T DA+ AL DG + S L I+RPK+++ A
Sbjct: 280 QISKDKSFALLEFKTPSDATLALAFDGITMDDSEYVNREANGGDTKGLSIRRPKDYIVPA 339
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH 612
+ V VS +V D+ +KI + + L+ + V+E++ +FG LKA+ +
Sbjct: 340 VSDETPQEPGV--VSSVVVDTQNKICMSNVPLYLTDEQVIELLTSFGELKAFVLVKDNST 397
Query: 613 EEP--CAFIEYVD-QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
E AF EY D T A+ GLNG+++G + L +A + GN G+
Sbjct: 398 GESRGIAFCEYADPAAATDIAVEGLNGMELGDKHLRVQRASI--------GNTQVSGLEM 449
Query: 670 --HALPLLKKPTE-------VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKS 720
+A+ +L T VL+L N+ PE + + EE+ EDV+ EC ++G V
Sbjct: 450 GVNAMSMLAGTTSAGLEDGRVLQLLNMVTPEEL--VDNDDYEEICEDVKEECEKYGKVLD 507
Query: 721 VNV 723
+ V
Sbjct: 508 MKV 510
>gi|391864554|gb|EIT73849.1| splicing factor U2AF, large subunit [Aspergillus oryzae 3.042]
Length = 538
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 183/388 (47%), Gaps = 62/388 (15%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS- 424
PRKR T + S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 124 PRKREATPDLTEVESVLHR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGAP 176
Query: 425 -----DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASE 477
DP + + +P AG + SASL N +R +RL V NLP SA+
Sbjct: 177 RQQPMDPSRLQAFMSQPGAGTAESASLKPSN-----------SRQAKRLFVSNLPASATG 225
Query: 478 KALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG 537
+ L+ F N L +G+ +H PCI + ++ A +EF T DA+ AL DG +
Sbjct: 226 ENLLSFFN--LQLNGLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDE 283
Query: 538 SI-------------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
S L+++RPK+++ V SG ++ V + V DSP+KI + I
Sbjct: 284 SEAAGNGAANGAPQGLEVRRPKDYI-VPSGNEQEYQEGV--LLNEVPDSPNKICVSNIPH 340
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQ 642
+ + V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G +
Sbjct: 341 YIPEEPVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDR 400
Query: 643 VLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSS 695
L V+A + I +G + +A+ + K T VL+L N+ PE
Sbjct: 401 HLKVVRASI--GITQAAG----LDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEEL-- 452
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + +E+ +DVR ECA++G V + +
Sbjct: 453 MDNDDYDEICDDVREECAKYGQVVELKI 480
>gi|317139209|ref|XP_001817348.2| splicing factor u2af large subunit [Aspergillus oryzae RIB40]
Length = 538
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 183/388 (47%), Gaps = 62/388 (15%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS- 424
PRKR T + S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 124 PRKREATPDLTEVESVLHR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGAP 176
Query: 425 -----DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASE 477
DP + + +P AG + SASL N +R +RL V NLP SA+
Sbjct: 177 RQQPMDPSRLQAFMSQPGAGTAESASLKPSN-----------SRQAKRLFVSNLPASATG 225
Query: 478 KALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG 537
+ L+ F N L +G+ +H PCI + ++ A +EF T DA+ AL DG +
Sbjct: 226 ENLLSFFN--LQLNGLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDE 283
Query: 538 SI-------------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
S L+++RPK+++ V SG ++ V + V DSP+KI + I
Sbjct: 284 SEAAGNGAANGAPQGLEVRRPKDYI-VPSGNEQEYQEGV--LLNEVPDSPNKICVSNIPH 340
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQ 642
+ + V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G +
Sbjct: 341 YIPEEPVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDR 400
Query: 643 VLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSS 695
L V+A + I +G + +A+ + K T VL+L N+ PE
Sbjct: 401 HLKVVRASI--GITQAAG----LDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEEL-- 452
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + +E+ +DVR ECA++G V + +
Sbjct: 453 MDNDDYDEICDDVREECAKYGQVVELKI 480
>gi|384246661|gb|EIE20150.1| hypothetical protein COCSUDRAFT_30785 [Coccomyxa subellipsoidea
C-169]
Length = 212
Score = 116 bits (290), Expect = 6e-23, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
RP RR+ V LP ++ L +++N ++S+G G P C I EK AF+EF +
Sbjct: 8 RPARRIYVGGLPPETTDADLRQYINELMVSTGGCAATG-YPIASCKIYTEKSYAFLEFRS 66
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIVKDS 573
E+AS + DG +F S L+++RP + V V G + V+++D V +V+DS
Sbjct: 67 VEEASNCMAFDGVAFKDSYLRVRRPNNYDINVAVMLGPTDPDPTMDVSNLDIVKTVVQDS 126
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAI 631
PHK+FIGG+ + V E++ FG LKA++ + N + + AF EY D +T I
Sbjct: 127 PHKLFIGGLPCDWTEDQVKELLLPFGSLKAFNLVMDKNTGNSKGYAFCEYQDIGLTDYVI 186
Query: 632 AGLNGLKVGGQVLTAVQAVLDGSI 655
LNG ++G + LT +A+ G +
Sbjct: 187 QNLNGKQIGNKFLTVKRALQPGPV 210
>gi|258576333|ref|XP_002542348.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902614|gb|EEP77015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 621
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 175/386 (45%), Gaps = 56/386 (14%)
Query: 366 SPRKRRTEAAAKTPSPINRSP----EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEM 421
SP +R+ E TP + P +++ +WD+ P +V T+ QA S +
Sbjct: 134 SPAQRKKEP---TPDLTDIVPIMERKRRLTQWDIKPPGYENV-----TAEQAKLSGMFPL 185
Query: 422 VSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKAL 480
+ Q+ + + A + + + +S L SN R +RL V NLP S SE L
Sbjct: 186 PGA-----PRQQTVDPSRLQAFMNQPAGNANSTLLKPSNSRQAKRLFVHNLPPSVSEDTL 240
Query: 481 MEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF----- 535
+F N L +G+ + G PCI + + A +EF TA DA+ AL DG S
Sbjct: 241 AQFFN--LQLNGLNVISGVDPCISAQVSSDGKFALLEFKTASDATVALALDGISLEHDDA 298
Query: 536 ------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSK 589
G L +KRPK++ + EA+ S VS V DSP+KI + I + +
Sbjct: 299 NGTSSAPGQGLSLKRPKDY--IVPSEADDSNRQDGVVSNEVPDSPNKICVTNIPPFIQEE 356
Query: 590 MVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAV 647
V ++ +FG LK++ + D AF EYVD T A+ GLNG+++G + L
Sbjct: 357 QVTMLLVSFGELKSFVLVKDSGTDESRGIAFCEYVDPSSTNIAVEGLNGMELGDKRLKVT 416
Query: 648 QAVLDGSI---MDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLS 697
+A + + +D N A+ + K T VL+L N+ E +
Sbjct: 417 RASIGATQAAGLDMGVN---------AMSMFAKTTSQDLETGRVLQLLNMVTAEEL--MD 465
Query: 698 ELEVEEVLEDVRLECARFGSVKSVNV 723
E EE+ +DVR EC+++G V + +
Sbjct: 466 SDEYEEICDDVREECSKYGQVLDLKI 491
>gi|238482353|ref|XP_002372415.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
gi|220700465|gb|EED56803.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
Length = 556
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 183/388 (47%), Gaps = 62/388 (15%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS- 424
PRKR T + S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 142 PRKREATPDLTEVESVLHR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGAP 194
Query: 425 -----DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASE 477
DP + + +P AG + SASL N +R +RL V NLP SA+
Sbjct: 195 RQQPMDPSRLQAFMSQPGAGTAESASLKPSN-----------SRQAKRLFVSNLPASATG 243
Query: 478 KALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG 537
+ L+ F N L +G+ +H PCI + ++ A +EF T DA+ AL DG +
Sbjct: 244 ENLLSFFN--LQLNGLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDE 301
Query: 538 SI-------------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
S L+++RPK+++ V SG ++ V + V DSP+KI + I
Sbjct: 302 SEAAGNGAANGAPQGLEVRRPKDYI-VPSGNEQEYQEGV--LLNEVPDSPNKICVSNIPH 358
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQ 642
+ + V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G +
Sbjct: 359 YIPEEPVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDR 418
Query: 643 VLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSS 695
L V+A + I +G + +A+ + K T VL+L N+ PE
Sbjct: 419 HLKVVRASI--GITQAAG----LDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEEL-- 470
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + +E+ +DVR ECA++G V + +
Sbjct: 471 MDNDDYDEICDDVREECAKYGQVVELKI 498
>gi|340520531|gb|EGR50767.1| predicted protein [Trichoderma reesei QM6a]
Length = 539
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 169/355 (47%), Gaps = 35/355 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P Y ++ T+ QA S + + Q+P+ + A + +
Sbjct: 161 KRRLTQWDIKP-PGY----DLVTAEQAKLSGMFPLPGA-----PRQQPMDPTKLQAFMTQ 210
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S L SN R +RL V N+P +E+AL+ F N L +G+ + PC+ C
Sbjct: 211 PGGQVSSAGLKASNSRQAKRLLVYNVPSGVTEEALIAFFN--LQLNGLNVIETPDPCVLC 268
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF------SGSI------LKIKRPKEFVEVAS 553
+K A VEF A DA+ AL DG + +G+ L I+RPK++ V
Sbjct: 269 QFSSDKTFAVVEFRNASDATVALALDGITMEADDAQNGTANGGSHGLDIRRPKDY--VMP 326
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 613
G + + +S +V D+ HK+ I I L+ + ++E++ AFG K++ + E
Sbjct: 327 GIPDDIPYDPEVISNVVPDTVHKLCITNIPTFLNEEQIIELLAAFGKPKSFVLVKDRSTE 386
Query: 614 EP--CAFIEYVD-QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIP 668
E AF EY+D A+ LNG+ V G+ L +A + + + N G G+
Sbjct: 387 ESRGIAFTEYLDPSSANEPALNSLNGMDVAGKKLKVTKASIGPTQVANFDVGITAISGLA 446
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+++ + V++L N+ PE L + EE+ EDV+ EC++FG V + V
Sbjct: 447 SQTSNDIER-SSVIQLLNMVTPEEL--LDNDDYEEICEDVQDECSKFGKVVELKV 498
>gi|119482894|ref|XP_001261475.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
gi|119409630|gb|EAW19578.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
Length = 563
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 54/384 (14%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T PS + R +++ +WD+ P +V T+ QA S + +
Sbjct: 149 PRKREPTPDLTDVPSVLTR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 200
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + S D+ L SN R RRL V NLP S + L+ F
Sbjct: 201 ----PRQQPMDPSRLQAFMNQPGGGSADNSALKPSNSRQARRLFVYNLPSVVSSEHLVSF 256
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF------SG 537
N L +G+ +H PCI I + A +EF T D + AL DG + SG
Sbjct: 257 FN--LQLNGLNVIHSVDPCISAQISEDHSFALLEFKTPNDTTVALAFDGITMEEHEPASG 314
Query: 538 SI------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMV 591
+ L+++RPK+++ V +G A++ + V DSP+KI + I + + + V
Sbjct: 315 TENGAPKGLEVRRPKDYI-VPNGSADQEYQE-GVLLNEVPDSPNKICVSNIPQYIPEEPV 372
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+A
Sbjct: 373 TMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRHLKVVRA 432
Query: 650 VL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
+ + +D N A+ + K T VL+L N+ PE L
Sbjct: 433 SIGMTQAAGLDMGVN---------AMSMFAKTTSQDLESSRVLQLLNMVTPEEL--LDND 481
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ +DVR EC+++G V + V
Sbjct: 482 DYEEICDDVREECSKYGKVLDLKV 505
>gi|83765203|dbj|BAE55346.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 563
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 183/388 (47%), Gaps = 62/388 (15%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS- 424
PRKR T + S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 145 PRKREATPDLTEVESVLHR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGAP 197
Query: 425 -----DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASE 477
DP + + +P AG + SASL N +R +RL V NLP SA+
Sbjct: 198 RQQPMDPSRLQAFMSQPGAGTAESASLKPSN-----------SRQAKRLFVSNLPASATG 246
Query: 478 KALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG 537
+ L+ F N L +G+ +H PCI + ++ A +EF T DA+ AL DG +
Sbjct: 247 ENLLSFFN--LQLNGLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDE 304
Query: 538 SI-------------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
S L+++RPK+++ V SG ++ V + V DSP+KI + I
Sbjct: 305 SEAAGNGAANGAPQGLEVRRPKDYI-VPSGNEQEYQEGV--LLNEVPDSPNKICVSNIPH 361
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQ 642
+ + V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G +
Sbjct: 362 YIPEEPVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDR 421
Query: 643 VLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSS 695
L V+A + I +G + +A+ + K T VL+L N+ PE
Sbjct: 422 HLKVVRASI--GITQAAG----LDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTPEEL-- 473
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + +E+ +DVR ECA++G V + +
Sbjct: 474 MDNDDYDEICDDVREECAKYGQVVELKI 501
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 171/372 (45%), Gaps = 70/372 (18%)
Query: 384 RSPEKKSAKWDV--APVETYSVPSNVHTSNQAA-----SSNAHEMVSSDPVTSTTQKPLA 436
R ++S++WDV P E NV+ S + S+ + M+ PV TTQ
Sbjct: 146 RKRHRRSSQWDVRKLPWEQSERDPNVNRSAYSVGGLDFSALSQYMI---PVAPTTQP--- 199
Query: 437 GISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQH 495
Q+ + RRL V NLP +E + +F N+ L L+ GV
Sbjct: 200 ------------------NTQQATKHARRLYVGNLPSDVTESEVADFFNSALYLAKGVD- 240
Query: 496 VHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF------- 548
V G P + +K AF+E +A +A+AA+ DG F G L+++RP ++
Sbjct: 241 VPGD-PVQSVYLNLDKRFAFIELNSAAEAAAAIQMDGVLFRGMSLRMRRPNDYNPNIHAP 299
Query: 549 --------VEVASGEAEKSVASVDS-----VSGIVKDSPHKIFIGGISRTLSSKMVMEIV 595
+ G EK D VS V D P K+FIGG+ L+ + EI+
Sbjct: 300 VYPPVCQLLTCFLGYIEKFQIGFDPSALGVVSTQVPDGPDKVFIGGLPYHLTEDQIKEIL 359
Query: 596 CAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA--VL 651
++GPL A++ + N + AF +Y D + AI GLNG+ +G + LT +A V
Sbjct: 360 SSYGPLNAFNLVKDPNTGLSKGYAFFQYKDPSIVEAAIKGLNGMTMGDKTLTVRRASQVS 419
Query: 652 DGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLE 711
GS+ + + P ++ PT +L+L+N+ PE + + E E+++EDVR E
Sbjct: 420 SGSV----------ELGQSFSPTVRYPTRILELRNMVEPEEL--VDDEEYEDIIEDVREE 467
Query: 712 CARFGSVKSVNV 723
+++G V V +
Sbjct: 468 SSKYGEVTEVKI 479
>gi|46125343|ref|XP_387225.1| hypothetical protein FG07049.1 [Gibberella zeae PH-1]
Length = 564
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 51/388 (13%)
Query: 366 SPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQ 412
+P++RR+ +P P R P +++ +WD+ P +V T+ Q
Sbjct: 130 APQERRS----ASPPPKKREPTPDLTNIVSVLERQRRLTQWDIKPPGYDNV-----TAEQ 180
Query: 413 AASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENL 471
A S + + Q+P+ + A + + + S L SN R +RL V +
Sbjct: 181 AKLSGMFPLPGA-----PRQQPMDPSKLQAFMNQPGGQVTSASLKASNSRQSKRLLVSRI 235
Query: 472 PLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCD 531
P SE AL+ F N L +G+ + + PC+ C ++ A +EF A + + AL D
Sbjct: 236 PPGTSEDALIAFFN--LQLNGLNVIDTTDPCVLCQFSNDRSFAVIEFKDAPETTVALALD 293
Query: 532 GCSFSGSI-----------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIG 580
G S + L+I+RP+++V A E + VS +V D+ +K+ I
Sbjct: 294 GISMEANDASNGADGGHRGLEIRRPRDYVVPAV--TEDVAYDPEVVSNVVPDTVNKLSIT 351
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVT-PKAIAGLNGL 637
I L+ + ++E++ +FG KA+ + EE AF EY D V+ P A+ LNG+
Sbjct: 352 NIPPFLTEEQIIELLASFGKPKAFVLVKDRGTEESRGIAFAEYQDPAVSNPTALDTLNGM 411
Query: 638 KVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSS 695
+GG+ + +A + + + N G G+ ++ + VL+L N+ E
Sbjct: 412 DIGGKQIKVSKASIGPTQVANFDVGITAISGLASQTANEVES-SRVLQLLNMVTAEEL-- 468
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
L + EE+ EDVR EC+++G + V V
Sbjct: 469 LDNDDYEEICEDVREECSKYGKILDVKV 496
>gi|134113282|ref|XP_774666.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257310|gb|EAL20019.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 652
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 34/340 (10%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WD APV+ + A + + + P P A + + A+
Sbjct: 221 WDTAPVQFQGI--------SALEAKTTGLFTYGP---GRVPPPAHLGIPATFVA-GAFPP 268
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
S + Q+NR L + + E+ + +F NN + G+ P C I ++
Sbjct: 269 SNPVRQNNR----LYIGGIKEDMQEQQIQDFFNNLMKEKGMADGKED-PVKQCQINNDRN 323
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI-VK 571
AF+E T E A+AAL DG G+ L+++RPK++ + + + + + V V
Sbjct: 324 FAFIELHTPEQATAALELDGVVLDGASLRVRRPKDYAGI-----DPLLQTFNGVVAPSVA 378
Query: 572 DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPK 629
DSP+K+FIGGI L+ + VME++ +FG LK+++ V E + AF EY+D VT
Sbjct: 379 DSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNL-VKESAGVSKGFAFAEYLDPEVTDM 437
Query: 630 AIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK------PTEVLK 683
AI GL+ +G + L +A + + N+ P A+P L + + V+
Sbjct: 438 AIQGLHNFSLGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQAIPHLMQNNADAPSSRVML 497
Query: 684 LKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE ++ + +++ED+ EC+++G ++ V +
Sbjct: 498 LLNMVTPEEL--YNDDDYNDIIEDINEECSKYGEIEGVRI 535
>gi|159123253|gb|EDP48373.1| splicing factor u2af large subunit [Aspergillus fumigatus A1163]
Length = 567
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 178/384 (46%), Gaps = 54/384 (14%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T PS + R +++ +WD+ P +V T+ QA S + +
Sbjct: 153 PRKREPTPDLTDVPSVLTR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 204
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + S D+ L SN R RRL V NLP S + L+
Sbjct: 205 ----PRQQPMDPSRLQAFMNQSGGGSADNSALKPSNSRQARRLFVYNLPPGVSSEHLVSL 260
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF------SG 537
N L +G+ +H PCI I + A +EF T DA+ AL DG + SG
Sbjct: 261 FN--LQLNGLNVIHHVDPCISAQISEDHSFALLEFKTPNDATVALAFDGITMEEHEPVSG 318
Query: 538 SI------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMV 591
+ L+++RPK+++ V +G A++ + V DSP+KI + I + + + V
Sbjct: 319 AENGAPKGLEVRRPKDYI-VPNGSADQEYQE-GVLLNEVPDSPNKICVSNIPQYIPEEPV 376
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+A
Sbjct: 377 TMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRHLKVVRA 436
Query: 650 VL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
+ + +D N A+ + K T VL+L N+ PE L
Sbjct: 437 SIGMTQAAGLDMGVN---------AMSMFAKTTSQDLESSRVLQLLNMVTPEEL--LDND 485
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ +DVR EC ++G V + V
Sbjct: 486 DYEEICDDVREECFKYGKVLDLKV 509
>gi|146324846|ref|XP_748978.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
gi|129556630|gb|EAL86940.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
Length = 563
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 178/384 (46%), Gaps = 54/384 (14%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T PS + R +++ +WD+ P +V T+ QA S + +
Sbjct: 149 PRKREPTPDLTDVPSVLTR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 200
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + S D+ L SN R RRL V NLP S + L+
Sbjct: 201 ----PRQQPMDPSRLQAFMNQSGGGSADNSALKPSNSRQARRLFVYNLPPGVSSEHLVSL 256
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF------SG 537
N L +G+ +H PCI I + A +EF T DA+ AL DG + SG
Sbjct: 257 FN--LQLNGLNVIHHVDPCISAQISEDHSFALLEFKTPNDATVALAFDGITMEEHEPVSG 314
Query: 538 SI------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMV 591
+ L+++RPK+++ V +G A++ + V DSP+KI + I + + + V
Sbjct: 315 AENGAPKGLEVRRPKDYI-VPNGSADQEYQE-GVLLNEVPDSPNKICVSNIPQYIPEEPV 372
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+A
Sbjct: 373 TMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRHLKVVRA 432
Query: 650 VL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
+ + +D N A+ + K T VL+L N+ PE L
Sbjct: 433 SIGMTQAAGLDMGVN---------AMSMFAKTTSQDLESSRVLQLLNMVTPEEL--LDND 481
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ +DVR EC ++G V + V
Sbjct: 482 DYEEICDDVREECFKYGKVLDLKV 505
>gi|348688506|gb|EGZ28320.1| hypothetical protein PHYSODRAFT_309221 [Phytophthora sojae]
Length = 694
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 150/294 (51%), Gaps = 37/294 (12%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQHVHGSLPCIGCVIQREKGQAF 515
+Q R RRL V + SE + F N+ + + G + GS+ + I RE+ AF
Sbjct: 350 SQQTRHARRLYVGGIG-EISEPEITAFFNDVIDRALGEKQEGGSV--VSVYINRERHFAF 406
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE-----AEKSVASVDSVSGIV 570
VE T E +A + DG S++G LKI+RP ++ + + ++A++ VS V
Sbjct: 407 VELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTV 466
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTP 628
D P KIFIGG+ L+ + V E++ AFGPL+++H E++ + + F EY+D VT
Sbjct: 467 SDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTD 526
Query: 629 KAIAGLNGLKVGGQVLTA--------VQAVLDGSIMDNSG-----NP--------PFHGI 667
A GLN +++G + LT +AV + N+G +P GI
Sbjct: 527 AACLGLNDMRLGDKTLTVRRAMSQENAKAVASAAGTVNTGLEMGLDPSRAAMQAMSLAGI 586
Query: 668 PKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
P +LP L P+ V+ L N+ PE E E ++L+D++ EC RFG+V S+
Sbjct: 587 P--SLP-LGTPSRVIVLLNMVTPE--ELEDEEEYADILDDIKGECERFGAVPSL 635
>gi|405121398|gb|AFR96167.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 655
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 160/340 (47%), Gaps = 34/340 (10%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
WD APV+ + A + + + P P A + + A+
Sbjct: 224 WDTAPVQFQGI--------SALEAKTTGLFTYGP---GRVPPPAHLGIPATFVA-GAFPP 271
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
S + Q+N RL + + E+ + +F NN + G+ P C I ++
Sbjct: 272 SNPVRQNN----RLYIGGIKEDMQEQQIQDFFNNLMKEKGMADGKED-PVKQCQINNDRN 326
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-VSGIVK 571
AF+E T E A+AAL DG G+ L+++RPK++ + + + + + V+ V
Sbjct: 327 FAFIELHTPEQATAALELDGVVLDGASLRVRRPKDYAGI-----DPLLQTFNGVVAPSVA 381
Query: 572 DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPK 629
DSP+K+FIGGI L+ + VME++ +FG LK+++ V E + AF EY+D VT
Sbjct: 382 DSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNL-VKESAGVSKGFAFAEYLDPEVTDM 440
Query: 630 AIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK------PTEVLK 683
AI GL+ +G + L +A + + N+ P A+P L + + V+
Sbjct: 441 AIQGLHNFALGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQAIPHLMQNNADAPSSRVML 500
Query: 684 LKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L N+ PE ++ + +++ED+ EC+++G ++ V +
Sbjct: 501 LLNMVTPEEL--YNDDDYNDIIEDINDECSKYGEIEGVRI 538
>gi|301117646|ref|XP_002906551.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262107900|gb|EEY65952.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 569
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 37/308 (12%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQHVHGSLPCIGCVIQREKGQA 514
L+Q R RRL V + SE + F N+ + + G + GS+ + I RE+ A
Sbjct: 224 LSQQTRHARRLYVGGIG-EISEPEITAFFNDVIDRALGEKQEGGSV--VSVYINRERHFA 280
Query: 515 FVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGE-----AEKSVASVDSVSGI 569
FVE + E +A + DG S++G LKI+RP ++ + + ++A++ VS
Sbjct: 281 FVELRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTT 340
Query: 570 VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVT 627
V D P KIFIGG+ L+ + V E++ AFGPL+++H E++ + + F EY+D VT
Sbjct: 341 VSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVT 400
Query: 628 PKAIAGLNGLKVGGQVLTA--------VQAVLDGSIMDNSG-----NPPF--------HG 666
A GLN +++G + LT +AV + N+G +P G
Sbjct: 401 DAACIGLNDMQLGDKTLTVRRAMSQENAKAVASAAGTVNTGLEMGLDPSLAAMQAMSMAG 460
Query: 667 IPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
IP ++P L P+ V+ L N+ PE E E ++L+D++ EC RFG+V S+ + +
Sbjct: 461 IP--SVP-LGTPSRVIVLLNMVTPE--ELEDEEEYADILDDIKGECERFGAVPSLLLPRP 515
Query: 727 GDSNISTI 734
D +S +
Sbjct: 516 RDGVLSAV 523
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 166/358 (46%), Gaps = 47/358 (13%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP T + + AA+ + P T PLA L V
Sbjct: 191 FDMAPPTT-----AILSGATAAAGQIPGTTPAIPGMFPTMFPLA---TGQPFGALPVMPV 242
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP +A+E+++ F + + + G + I EK
Sbjct: 243 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 302
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDS 565
AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ ++A+V
Sbjct: 303 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 362
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF
Sbjct: 363 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFC 420
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--------FHGIPKHA 671
Y D VT A A LNG+K+G + LT +A + N P H + A
Sbjct: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRA-------NQGANQPKPEQESVLLHAQQQIA 473
Query: 672 LP-LLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
L L+ +P T+VL L V PE +++ + E+++ED+R E +FG++ VNVV
Sbjct: 474 LQKLMLQPGAVSTKVLCLTQVVTPE--ELINDEDYEDIMEDMRGEGGKFGTL--VNVV 527
>gi|440792998|gb|ELR14199.1| U2 snRNP auxilliary factor, large subunit, splicing factor
subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 462
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 501 PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS- 559
P + + +K +F+EF T ++A+A + DG + +G LK++RPK++V + +A S
Sbjct: 193 PVVSSQLNPDKSFSFIEFSTIDEATAGMALDGITMNGMTLKVRRPKDYVSPPTAQAPASG 252
Query: 560 -VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPC 616
+ VS V DSP+KIFIGG+ L+ V E++ AFGPLKA++ + + +
Sbjct: 253 GIHIPGIVSTNVPDSPNKIFIGGLPSYLNEAQVKELLTAFGPLKAFNLVKDTATGNSKGY 312
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK 676
AF EY+D VT +A GLNG+K+G + L VQ G+ D +G L+
Sbjct: 313 AFFEYLDASVTDRACQGLNGMKLGDKTLL-VQRANIGAKQDGTGG------------LIM 359
Query: 677 KPTEVLKLKNVFNPEGFSS--------------LSELEVEEVLEDVRLECARFGSVKSVN 722
P + + N +P S +S+ + +++EDVR EC ++G+V SV
Sbjct: 360 MPMDPSGMLNA-SPSAASLLNLQLLNLVRPEELVSDEDHADIVEDVRQECEKYGNVMSV- 417
Query: 723 VVKYGD 728
V++ D
Sbjct: 418 FVEFAD 423
>gi|358378060|gb|EHK15743.1| hypothetical protein TRIVIDRAFT_79964 [Trichoderma virens Gv29-8]
Length = 503
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 35/355 (9%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P Y ++ T+ QA S + + Q+P+ + A + +
Sbjct: 108 KRRLTQWDIKP-PGY----DLVTAEQAKLSGMFPLPGA-----PRQQPMDPTKLQAFMTQ 157
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S L SN R +RL V N+P S ++ AL+ F N L +G+ + S PC+
Sbjct: 158 PGGQVTSAGLKASNSRQAKRLLVSNVPSSVTDDALISFFN--LQLNGLNVIDSSDPCVLS 215
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF------SGSI------LKIKRPKEFVEVAS 553
++K A +EF A DA+ AL DG + +G+ L I+RPK++V A
Sbjct: 216 QFSQDKAFAVLEFRNASDATVALALDGITMEADDAQNGTANGGNHGLVIRRPKDYVMPAL 275
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 613
+ V +S +V D+ HK+ I I L+ V+E++ AFG KA+ + E
Sbjct: 276 PDEMPYDPEV--ISNVVPDTVHKLCITNIPSFLNEDQVIELLAAFGKPKAFVLVKDRSTE 333
Query: 614 EP--CAFIEYVD-QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIP 668
E AF EY++ A+ LNG+ VGG+ L +A + + + N G G+
Sbjct: 334 ESRGIAFTEYLEPSTANEPALNSLNGMDVGGKKLKVTKASIGPTQVANFDVGITAISGLA 393
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+++ + V++L N+ PE + + EE+ EDV+ EC++FG V + V
Sbjct: 394 SQTSNDIER-SSVIQLLNMVTPEEL--MDNDDYEEICEDVQDECSKFGKVVELKV 445
>gi|302916595|ref|XP_003052108.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
gi|256733047|gb|EEU46395.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 188/414 (45%), Gaps = 55/414 (13%)
Query: 367 PRKRRTEAAAKTPSPINRSP----EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMV 422
P+KR TP N P +++ +WD+ P +V T+ QA S +
Sbjct: 138 PKKRE-----PTPDLTNIVPILERKRRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLP 187
Query: 423 SSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALM 481
+ Q+P+ + A + + + S L +N R +RL V +P SE+AL+
Sbjct: 188 GA-----PRQQPMDPSKLQAFMNQPGGQVTSAGLKANNSRQSKRLLVSKIPSGTSEEALI 242
Query: 482 EFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-----S 536
F N L +G+ + + PCI C ++ A +EF A +A+ AL DG S +
Sbjct: 243 SFFN--LQLNGLNVIDATDPCILCQFSNDRSFAVLEFREASEATVALALDGTSMEPDDAN 300
Query: 537 GSI------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKM 590
G+ L+I+RP+++V A E+ + D VS IV D+ +K+ I I L+
Sbjct: 301 GASNGESRGLEIRRPRDYVVPAV--TEEVSYNPDVVSNIVPDTINKLCITNIPPFLAEDQ 358
Query: 591 VMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVD-QLVTPKAIAGLNGLKVGGQVLTAV 647
V+E++ AFG KA+ + EE AF EY D P A+ LNG+ VGG+ L
Sbjct: 359 VIELLAAFGKPKAFVLVKDRGTEESRGIAFAEYQDPNAANPTALDTLNGMDVGGKKLKVT 418
Query: 648 QAVLDGSIMDN--SGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVL 705
+A + + + N G G+ ++ + VL+L N+ E L + EE+
Sbjct: 419 KASIGPTQVANFDVGITAISGLASQTANDVEG-SRVLQLLNMVTAEEL--LDNDDYEEIC 475
Query: 706 EDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNE 759
EDV+ EC++FG + + + + + SAGVG+ ET E
Sbjct: 476 EDVKEECSKFGKIIDMKIPR------------PTGGSRQSAGVGKIFVKYETIE 517
>gi|408397958|gb|EKJ77095.1| hypothetical protein FPSE_02739 [Fusarium pseudograminearum CS3096]
Length = 554
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 177/388 (45%), Gaps = 51/388 (13%)
Query: 366 SPRKRRTEAAAKTPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQ 412
+P++RR+ +P P R P +++ +WD+ P +V T+ Q
Sbjct: 130 APQERRS----ASPPPKKREPTPDLTNIVSVLERQRRLTQWDIKPPGYDNV-----TAEQ 180
Query: 413 AASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVENL 471
A S + + Q+P+ + A + + + S L SN R +RL V +
Sbjct: 181 AKLSGMFPLPGA-----PRQQPMDPSKLQAFMNQPGGQVTSAGLKASNSRQSKRLLVSRI 235
Query: 472 PLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCD 531
P SE L+ F N L +G+ + + PC+ C ++ A +EF A + + AL D
Sbjct: 236 PPGTSEDTLIAFFN--LQLNGLNVIDTTDPCVLCQFSNDRSFAVIEFKDAPETTVALALD 293
Query: 532 GCSFSGSI-----------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIG 580
G S + L+I+RP+++V A E + VS +V D+ +K+ I
Sbjct: 294 GISMEANDASNGADGGHRGLEIRRPRDYVVPAV--TEDVAYDPEVVSNVVPDTVNKLSIT 351
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVT-PKAIAGLNGL 637
I L+ + ++E++ +FG KA+ + EE AF EY D V+ P A+ LNG+
Sbjct: 352 NIPPFLTEEQIIELLASFGKPKAFVLVKDRGTEESRGIAFAEYQDPAVSNPTALDTLNGM 411
Query: 638 KVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSS 695
+GG+ + +A + + + N G G+ ++ + VL+L N+ E
Sbjct: 412 DIGGKQIKVSKASIGPTQVANFDVGITAISGLASQTANEVES-SRVLQLLNMVTAEEL-- 468
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
L + EE+ EDVR EC+++G + V V
Sbjct: 469 LDNDDYEEICEDVREECSKYGKILDVKV 496
>gi|296420976|ref|XP_002840043.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636253|emb|CAZ84234.1| unnamed protein product [Tuber melanosporum]
Length = 540
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 181/423 (42%), Gaps = 56/423 (13%)
Query: 358 STSGLGGYSPRKRRTEAAAK----TP-----SPINRSPEKKSAKWDVAPVETYSVPSNVH 408
ST+ Y RKR K TP +PIN ++ WD+ P +V
Sbjct: 119 STAAADAYPVRKRSATPPVKKREPTPDLTDVTPINER-RRRMTMWDIKPQGYENV----- 172
Query: 409 TSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL-NVSMDSVQLTQSNRPMRRLC 467
T+ QA S + + Q P+ + A + + NV+ S ++R +RL
Sbjct: 173 TAEQAKLSGMFPLPGA-----PRQAPMDPTRLHAFMTQPSNVATASTLKPTNSRQAKRLL 227
Query: 468 VENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAA 527
+ N+P E++L++F N L S V G P + K +EF DA+
Sbjct: 228 MSNIPPGTDEESLLQFFNQTLSSLNVT-TGGPDPITSVQLSGSKILGLLEFKNTNDATVC 286
Query: 528 LCCDGCSFSGSILKIKRPKEFVEVASGE----AEKSVASVDSVSGIVKDSPHKIFIGGIS 583
L G F+G ++IKRP++++ E E V S D V D+P+KI I I
Sbjct: 287 LALSGIEFNGGNIEIKRPRDYIVPIVPEDHRHQEPGVISSD-----VPDTPNKILISEIP 341
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
L + V+E++ +FG LKA+ +V ++ + AF EY+D T A+ GLN +++
Sbjct: 342 EYLQDEQVIELLKSFGDLKAFVLVKDVTDETSKGIAFCEYLDPGTTEIAVEGLNAMEIAD 401
Query: 642 QVLTAVQAVLD-----GSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSL 696
L +A + G M + G L + + VL+L N+ + L
Sbjct: 402 NTLRVRRASIGMKQAAGVEMGVNAMAMMAGTTSVDL----EASRVLQLLNMVTADEL--L 455
Query: 697 SELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDE 756
E +E+ ED+R EC +FGS+ + V + + +AGVG+ E
Sbjct: 456 DPEEYDEICEDIRDECQKFGSLVDMKVPR------------PSGGSRQAAGVGKIFVRFE 503
Query: 757 TNE 759
T E
Sbjct: 504 TQE 506
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 113 bits (282), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 16/296 (5%)
Query: 436 AGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQH 495
AG ++ L+ + + M+ R +RL N+P+ E+ ++ F ++ G+
Sbjct: 207 AGFGINRGLS-MGMGMNGRNQQPIARQFKRLYFGNIPVDCIEERILSFASSSYEKLGLPK 265
Query: 496 VHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVAS-- 553
G+ + I RE+ AFVEF + E+A+ A+ DG F G+ILK++RPK++ A+
Sbjct: 266 DPGN-AAVNAYINRERNYAFVEFRSPEEATRAMALDGSLFDGNILKVRRPKDYNPEAAPD 324
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNED 611
G + S+A S ++S KIF+G I LS V E++ FG LK + +
Sbjct: 325 GATQPSIAPATS----AQESLDKIFVGAIPTYLSDDQVQELLKTFGELKTFSLIRDSATG 380
Query: 612 HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHA 671
+ AF EYVD +T A GLNG+++G + L +A + + S +P
Sbjct: 381 LSKGFAFCEYVDGQITDAACQGLNGMELGEKKLIVQRASVGSNKNTISAVGQSQLLPMEI 440
Query: 672 LPLLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L + K T VL L N+ E +S+ + +++L D++ EC +FG++ + +
Sbjct: 441 LATIAKDPCKVTRVLLLLNMVVSEDL--VSDEDYQDILLDIQEECEKFGTILDIAI 494
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 166/358 (46%), Gaps = 47/358 (13%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP T + + AA+ + P T PLA L V
Sbjct: 191 FDMAPPTT-----AILSGATAAAGQIPGTTPAIPGMFPTMFPLA---TGQPFGALPVMPV 242
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP +A+E+++ F + + + G + I EK
Sbjct: 243 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 302
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDS 565
AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ ++A+V
Sbjct: 303 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 362
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF
Sbjct: 363 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFC 420
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--------FHGIPKHA 671
Y D VT A A LNG+K+G + LT +A + N P H + A
Sbjct: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRA-------NQGANQPKPEQESVLLHAQQQIA 473
Query: 672 LP-LLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
L L+ +P T+VL L V PE +++ + E+++ED+R E +FG++ VNVV
Sbjct: 474 LQKLMLQPGAVSTKVLCLTQVVTPE--ELINDEDYEDIMEDMRGEGGKFGTL--VNVV 527
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 50/359 (13%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP + +P T+ Q ++ S P + PL S L V
Sbjct: 164 FDMAPPTSALLPGATDTAGQVPGAS-----PSIPGMFSNMFPL----TSGQFGALPVMPI 214
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP SA+E+++ F ++ + + G + I EK
Sbjct: 215 QAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKK 274
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDS 565
AFVE + E+AS A+ DG F G +K++RP ++ + G ++ S +A+V
Sbjct: 275 FAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGL 334
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + + E++ +FG L+ F++ +D E + AF
Sbjct: 335 TPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG--FDLVKDRETGNSKGYAFC 392
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT 679
Y D VT A A LNG+K+G + LT +A N G P P+ LL
Sbjct: 393 VYQDVSVTDIACAALNGIKMGDKTLTVRRA--------NQGTP--QPNPEQESVLLHAQQ 442
Query: 680 EVLKLKNVFNPEGFS----------SLSEL----EVEEVLEDVRLECARFGSVKSVNVV 724
++ K +F P + S+ EL + +++LED+R EC +FG++ +NVV
Sbjct: 443 QIALQKFMFQPGALATKVLCLTQAVSVDELNDDDDYQDILEDMRTECGKFGAL--LNVV 499
>gi|395529346|ref|XP_003766777.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Sarcophilus
harrisii]
Length = 462
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 26/255 (10%)
Query: 382 INRSPEKKSAK-----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLA 436
+ RSP + K WDV P + + + QAA Q P
Sbjct: 124 VIRSPRHEKKKKIRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPAT 167
Query: 437 GISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ 494
+ + + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 168 ALLPTMTPDGLAVTPAPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLT 227
Query: 495 HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASG 554
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++ +
Sbjct: 228 QAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM 286
Query: 555 EAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDH 612
SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ +
Sbjct: 287 SENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL 346
Query: 613 EEPCAFIEYVDQLVT 627
+ AF EYVD VT
Sbjct: 347 SKGYAFCEYVDINVT 361
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 34/338 (10%)
Query: 413 AASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLP 472
A+ A ++ + P + + + + L V Q+ R RR+ V L
Sbjct: 237 GATGVAGQITGASPAIPGMFPNMFPLPTNQPFSALPVLPVQAMTQQATRHARRVYVGGLS 296
Query: 473 LSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDG 532
+A+E+++ F + + + G + I +K AFVE + E+AS A+ DG
Sbjct: 297 PTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDG 356
Query: 533 CSFSGSILKIKRPKEF---VEVASGEAEKSV--------ASVDSVSGIVKDSPHKIFIGG 581
F G+ +K++RP ++ + A G ++ + S S G+ D P +IF+GG
Sbjct: 357 IIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSAGGL--DGPDRIFVGG 414
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGL 637
+ + + E++ FGPL+ F++ +D E + AF Y D VT A A LNG+
Sbjct: 415 VPYYFTETQIRELLETFGPLRG--FDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGI 472
Query: 638 KVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP------LLKKP----TEVLKLKNV 687
K+G + LT +A + + M P I HA L+ +P T+VL L +
Sbjct: 473 KMGDKTLTVRRANQNTNPM--QPKPEQESILMHAQQQIALQKLMLQPALVATKVLCLTHA 530
Query: 688 FNPEGFSSLSELEVEEVLEDVRLECARFGSV-KSVNVV 724
+P+ + + EE+L+D+R EC++FG++ VNVV
Sbjct: 531 VSPDELK--DDEDYEEILDDMRQECSKFGNICNLVNVV 566
>gi|378731414|gb|EHY57873.1| U2AF domain-containing protein (UHM) kinase 1 [Exophiala
dermatitidis NIH/UT8656]
Length = 574
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 164/364 (45%), Gaps = 48/364 (13%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+ + + A +
Sbjct: 175 KRRLTQWDIKPPGYENV-----TAEQAKMSGMFPLPGA-----PRQQQMDPSRLQAFMNL 224
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
+ S ++ L SN R RRL V NLP S SE+AL++F N L +G+ PC
Sbjct: 225 PSSSSNNTALKPSNSRQARRLFVHNLPASVSEEALVQFFN--LQLNGLNVTKAVDPCAQA 282
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF-------------------SGSILKIKRPK 546
I ++ A VEF A DA+ AL DG + + L+I+RPK
Sbjct: 283 NIAEDRSFALVEFKNASDATLALALDGITMPEHHSEMNGNGDANGNGTAAPKGLEIRRPK 342
Query: 547 EFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF 606
+++ ++ EA + + S V D+ +K+ + + L+ V+E++ AFG +KA+
Sbjct: 343 DYIVPSADEATYAEGEISSE---VPDTANKLAVTNLPPFLTDDQVIELLKAFGEVKAFVL 399
Query: 607 EVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD-----GSIMDNS 659
D +E AF EY D T AI GLNG+ + G + +A + G M +
Sbjct: 400 VREPDSQESRGIAFCEYADPASTAVAIEGLNGMDLAGNSIKVTRASIGYQQAAGLDMGVN 459
Query: 660 GNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVK 719
F G A VL+L N+ PE + + EE+ EDV EC+++G +
Sbjct: 460 AMSMFAGTTSDA----HDEGRVLQLLNMVTPEDL--MDNDDYEEICEDVMEECSKYGKIL 513
Query: 720 SVNV 723
S+ +
Sbjct: 514 SMKI 517
>gi|403175591|ref|XP_003888994.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171670|gb|EHS64431.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 713
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 143/306 (46%), Gaps = 42/306 (13%)
Query: 454 VQLTQS-NRPMRRLCVENLPLSASEKALMEFLNN-----FLLS----SGVQHVHGSLPCI 503
V TQS R RRL V N+ +A+E + EF N LL+ G+ P +
Sbjct: 326 VAQTQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVV 385
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ EK AFVEF AE+A+ + DG F LKI+RPK++ +G +
Sbjct: 386 AVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDY----TGPDHAGPTHI 441
Query: 564 DS-VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH----EEPCAF 618
VS V DSP+KIFIGG+ L+ VME++ +FG LK+++ + + AF
Sbjct: 442 PGVVSTNVPDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGHVSKGFAF 501
Query: 619 IEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP------------FHG 666
EYVD +T A GLNG+++G + L +A + + N P F G
Sbjct: 502 CEYVDPDLTDIACQGLNGMELGDRYLVVQRAQIGQNAKKEKENNPDGQRNNYNQFNNFAG 561
Query: 667 IPKHALPLLK---------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGS 717
A + T VL++ N+ N E + + E E+LED+R EC ++G
Sbjct: 562 GQATAAASSVLAAVKSGEGEKTRVLQMLNMVNQEEL--VDDQEYGEILEDIRDECGKYGK 619
Query: 718 VKSVNV 723
++ V +
Sbjct: 620 IEGVRI 625
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 139/285 (48%), Gaps = 33/285 (11%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R +RL V N P ++++ ++ +F N L + + + S PCI I +++ A EF
Sbjct: 18 SRQAKRLFVYNFPAASTDDSIQDFFN--LQLNHLNVISSSDPCISVQISKDRTFALCEFK 75
Query: 520 TAEDASAALCCDGCSFSG------------SILKIKRPKEFVEVASGEAEKSVASVDSVS 567
T ED + AL DG S S +KI RPK+++ A + V VS
Sbjct: 76 TPEDTTMALALDGQSMEAEDASNGASNGGHSGIKISRPKDYIVPAQSDDADYQEGV--VS 133
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQL 625
VKD PHKI + I L+ + VM+++ AFG LKA+ + D + AF EYVD
Sbjct: 134 NKVKDGPHKICVAQIPVYLTEEQVMDLLSAFGGLKAFTLVKDTGTDQSKGIAFCEYVDPD 193
Query: 626 VTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTE----- 680
T A+ GL+G+++ L +A + I SG G+ +A+ +L +
Sbjct: 194 TTDPAVEGLDGMEIAQDHLKVKKACV--GIQQASGLE--MGV--NAMSMLAGTSSGDVEQ 247
Query: 681 --VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
VL L N+ PE + E EE+ EDV EC+++G V+ + +
Sbjct: 248 GRVLMLLNMVTPEEL--MDPQEYEEIQEDVHEECSKYGKVEELKI 290
>gi|121711505|ref|XP_001273368.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
gi|119401519|gb|EAW11942.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
Length = 583
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 177/382 (46%), Gaps = 49/382 (12%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T S + R +++ +WD+ P +V T+ QA S + +
Sbjct: 150 PRKREPTPDLTDVQSVLTR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 201
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + S D+ L SN R +RL V NLP S + L+ F
Sbjct: 202 ----PRQQPMDPSRLQAFMNQPGGGSADNAALKPSNSRQAKRLFVYNLPPGVSNEHLVSF 257
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ +H PCI I + A +EF + D + AL DG +
Sbjct: 258 FN--LQLNGLNVIHNVDPCISAQISEDHTFALLEFKSPNDTTVALAFDGITMEEHEAMGA 315
Query: 536 -----SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKM 590
+ L+++RPK++V V +G A++ + V DSP+KI + I + + +
Sbjct: 316 GAENGASKGLEVRRPKDYV-VPNGSADQEYQE-GVLLNEVPDSPNKICVSNIPQYIPEEP 373
Query: 591 VMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 648
V ++ +FG LK++ + EE AF EY D TP A+ GLNG+++G + L V+
Sbjct: 374 VTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATPIAVEGLNGMELGDRHLKVVR 433
Query: 649 AVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSELEV 701
A SI G+ +A+ + K T VL+L N+ PE + +
Sbjct: 434 A----SIGMTQAVGLDMGV--NAMSMFAKTTSQDLESGRVLQLLNMVTPEEL--MDNDDY 485
Query: 702 EEVLEDVRLECARFGSVKSVNV 723
EE+ +DVR EC+++G V + V
Sbjct: 486 EEICDDVREECSKYGKVLDLKV 507
>gi|389642205|ref|XP_003718735.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
gi|351641288|gb|EHA49151.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
Length = 620
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 27/289 (9%)
Query: 454 VQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
V L +N R +RL + NLP +E +L+ FLN L +G+ + S PC+ C + +
Sbjct: 282 VTLRPTNSRQSKRLILSNLPAGTTEDSLISFLN--LQLNGLNVIEASDPCLACQMAPDGS 339
Query: 513 QAFVEFLTAEDASAALCCDGCSF-------------SGSILKIKRPKEFVEVASGEAEKS 559
A VEF + D + A DG S + L ++RPK+++ A +
Sbjct: 340 FAMVEFRSPSDTTVAYALDGISMEAEDAGNGDANGAASKGLAMRRPKDYIVPAVVDDTGY 399
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CA 617
V VS V D+PHKI + + L+ + V+E++ +FG LKA + EE A
Sbjct: 400 EPGV--VSSRVVDTPHKISVTNLPAYLTDEQVVELLSSFGELKALVLAKDSSTEESRGIA 457
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG-NPPFHGIPKHALPLLK 676
F EYVD T AI GLNG+++G + L +A + I SG + + A + +
Sbjct: 458 FCEYVDVTNTDVAIEGLNGMELGDKRLKVRKASI--GITQVSGMEMGVNAMSMLAGTVAQ 515
Query: 677 KP--TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P + VL+L N+ + + + EE+ EDV+ ECA++G+V + V
Sbjct: 516 DPDLSPVLQLLNMVTADEL--MDNDDYEEICEDVQEECAKYGTVIELKV 562
>gi|259480265|tpe|CBF71237.1| TPA: splicing factor u2af large subunit (AFU_orthologue;
AFUA_7G05310) [Aspergillus nidulans FGSC A4]
Length = 547
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 178/384 (46%), Gaps = 50/384 (13%)
Query: 366 SPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
SP ++R T P + +++ +WD+ P P + + + A +A ++
Sbjct: 130 SPSRKREPTPDLTDVPSVLTRKRRLTQWDIKP------PGYENVTAEQAKLSADDLGMFP 183
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
+ Q+P+ + A + + S D+ L SN R +RL V NLP +A+ + L+ F
Sbjct: 184 LPGAPRQQPMDPSRLQAFMNQSGGGSADTSALKPSNSRQAKRLFVYNLPPNATVENLVSF 243
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI I + A +EF + D + AL DG +
Sbjct: 244 FN--LQLNGLNVIQSVDPCISAQISDDHSFALLEFKSPNDTTVALALDGITMGEHESNGE 301
Query: 536 --SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI--VKDSPHKIFIGGISRTLSSKMV 591
+ L+++RPK+++ E + ++ SG+ V DSP+KI + I + + + V
Sbjct: 302 NGAAKGLEVRRPKDYIVPNLAEQD-----LEGASGMKDVPDSPNKICVSNIPQYIPEEPV 356
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+A
Sbjct: 357 TMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPNTTTIAVQGLNGMELGDRHLKVVRA 416
Query: 650 VL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
+ + +D N A+ + K T VL+L N+ PE +
Sbjct: 417 SIGMTQAAGLDMGVN---------AMSMFAKTTSQDLESSRVLQLLNMVTPEEL--MDNE 465
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ +DVR EC++FG V + +
Sbjct: 466 DYEEICDDVRDECSKFGRVLELKI 489
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 48/329 (14%)
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQ-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG 492
P AG S +M + +TQ + R RR+ V LP A+E+ + F + + + G
Sbjct: 32 PFAGTQASLLFFAGLPTMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIG 91
Query: 493 VQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---V 549
+ I +EK AFVE T E+AS A+ DG F G ++++RP ++ +
Sbjct: 92 GNTAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSM 151
Query: 550 EVASGEAEKS----VASVDSVSGIV--KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKA 603
G ++ S +A+V G D P +IF+GG+ L+ + E++ +FGPL+
Sbjct: 152 AATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRG 211
Query: 604 YHFEVNED--HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLT---AVQAVLDGSIMDN 658
+ + D + + F Y D VT A A LNGLK+G + LT A +V G +
Sbjct: 212 FDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRATASVHSGQPKPD 271
Query: 659 SGN-----------------PPFH-----GIPKHALPLLKKPTEVLKLKNVFNPEGFSSL 696
N P++ G+ + + + + PT+V+ LK V +P+
Sbjct: 272 QANVLAQAQQQIALQLALQGAPYYNMMMPGV-DNGMTMPETPTKVVCLKQVVSPD----- 325
Query: 697 SEL----EVEEVLEDVRLECARFGSVKSV 721
EL E EE+LED+R EC ++GSV ++
Sbjct: 326 -ELKEDDEYEEILEDMREECGKYGSVATL 353
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 35/292 (11%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V L +A+E+++ F + + + G + I +K AFVE
Sbjct: 284 QATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVE 343
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSV--------ASVDSV 566
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ + S S
Sbjct: 344 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSA 403
Query: 567 SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYV 622
G+ D P +IF+GG+ + + E++ FGPL+ F++ +D E + AF Y
Sbjct: 404 GGL--DGPDRIFVGGVPYYFTETQIRELLETFGPLRG--FDLVKDRETGNSKGYAFCVYQ 459
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP------LLK 676
D VT A A LNG+K+G + LT +A + + M P I HA L+
Sbjct: 460 DLAVTDIACAALNGIKMGDKTLTVRRANQNTNPM--QPKPEQESILMHAQQQIALQKLML 517
Query: 677 KP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
+P T+VL L + +P+ + + EE+L+D+R EC++FG++ VNVV
Sbjct: 518 QPALVATKVLCLTHAVSPDELK--DDEDYEEILDDMRQECSKFGNL--VNVV 565
>gi|402906865|ref|XP_003916203.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Papio anubis]
Length = 446
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 162/354 (45%), Gaps = 54/354 (15%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAE 557
G+ P + I ++K AF+E + LC L + E+V
Sbjct: 183 GN-PVLAVQINQDKNFAFLEVSWGNRSGPVLCA---------LAMLTFPEWV-------- 224
Query: 558 KSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEP 615
VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + +
Sbjct: 225 --------VSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKG 276
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPK 669
AF EYVD VT +AIAGLNG+++G + L +A + + + P G+
Sbjct: 277 YAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMS 336
Query: 670 HALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + PTEVL L N+ PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 337 SQVQMGGHPTEVLCLMNMVLPE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 388
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 34/293 (11%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V L +A+E+++ F + + + G + I +K AFVE
Sbjct: 284 QATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVE 343
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSV--------ASVDSV 566
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ + S S
Sbjct: 344 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSA 403
Query: 567 SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYV 622
G+ D P +IF+GG+ + + E++ FGPL+ F++ +D E + AF Y
Sbjct: 404 GGL--DGPDRIFVGGVPYYFTETQIRELLETFGPLRG--FDLVKDRETGNSKGYAFCVYQ 459
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP------LLK 676
D VT A A LNG+K+G + LT +A + + M P I HA L+
Sbjct: 460 DLAVTDIACAALNGIKMGDKTLTVRRANQNTNPM--QPKPEQESILMHAQQQIALQKLML 517
Query: 677 KP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV-KSVNVV 724
+P T+VL L + +P+ + + EE+L+D+R EC++FG++ VNVV
Sbjct: 518 QPALVATKVLCLTHAVSPDELK--DDEDYEEILDDMRQECSKFGNICNLVNVV 568
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 27/289 (9%)
Query: 454 VQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
V L +N R +RL + NLP +E +L+ FLN L +G+ + S PC+ C + +
Sbjct: 282 VTLRPTNSRQSKRLILSNLPAGTTEDSLISFLN--LQLNGLNVIEASDPCLACQMAPDGS 339
Query: 513 QAFVEFLTAEDASAALCCDGCSF-------------SGSILKIKRPKEFVEVASGEAEKS 559
A VEF + D + A DG S + L ++RPK+++ A +
Sbjct: 340 FAMVEFRSPSDTTVAYALDGISMEAEDAGNGDANGAASKGLAMRRPKDYIVPAVVDDTGY 399
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CA 617
V VS V D+PHKI + + L+ + V+E++ +FG LKA + EE A
Sbjct: 400 EPGV--VSSRVVDTPHKISVTNLPAYLTDEQVVELLSSFGELKALVLAKDSSTEESRGIA 457
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG-NPPFHGIPKHALPLLK 676
F EYVD T AI GLNG+++G + L +A + I SG + + A + +
Sbjct: 458 FCEYVDVTNTDVAIEGLNGMELGDKRLKVRKASI--GITQVSGMEMGVNAMSMLAGTVAQ 515
Query: 677 KP--TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P + VL+L N+ + + + EE+ EDV+ ECA++G+V + V
Sbjct: 516 DPDLSPVLQLLNMVTADEL--MDNDDYEEICEDVQEECAKYGTVIELKV 562
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 167/365 (45%), Gaps = 51/365 (13%)
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTS---TTQKPLAGISVSASLAK 446
++ +D+AP P++ + AS+ A ++ ++P PLA S +
Sbjct: 196 TSGFDMAP------PASAMLT--GASAVAGQITGANPTIPGMFPNMFPLA-TSQMQQFSA 246
Query: 447 LNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
L V Q+ R RR+ V LP +A+E+++ F + + G +
Sbjct: 247 LPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDAVVNVY 306
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----S 559
I +K AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ +
Sbjct: 307 INHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNLN 366
Query: 560 VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE---- 613
+ +V G D P ++F+GG+ + + E++ FGPL+ F++ +D E
Sbjct: 367 LGAVGLTPGSAGGLDGPDRVFVGGLPYYFTETQIRELLETFGPLRG--FDLVKDRETGNS 424
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP 673
+ AF Y D VT A A LNG+K+G + LT +A N G P P+
Sbjct: 425 KGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRA--------NQGANPQQPKPEQESI 476
Query: 674 LLKKPTEVLKLKNVFNPEGFS----------SLSEL----EVEEVLEDVRLECARFGSVK 719
L+ ++ K + P + S EL + EE+L+D+R EC++FG++
Sbjct: 477 LMHAQQQIALQKLMLQPALVATKVVCLTHAVSSDELKDDEDYEEILDDMRQECSKFGTL- 535
Query: 720 SVNVV 724
VNVV
Sbjct: 536 -VNVV 539
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 166/361 (45%), Gaps = 54/361 (14%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP + +P + Q +N P PLA S L V
Sbjct: 177 FDMAPPTSAMLPGITAAAGQVPGTN-----PPIPGMFPNMFPLA----SGQFGALPVMPI 227
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP A+E+++ F ++ + + G + I EK
Sbjct: 228 QAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKK 287
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASV-- 563
AFVE + E+AS A+ DG F G+ K++RP ++ + G ++ ++A+V
Sbjct: 288 FAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 347
Query: 564 --DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCA 617
S G+ + P +IF+GG+ + + E++ +FGPL+ F++ +D E + A
Sbjct: 348 SPGSAGGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRG--FDLVKDRETGNSKGYA 403
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN----PPFHGIPKHALP 673
F Y D VT A A LNG+K+G + LT +A N G P + HA
Sbjct: 404 FCVYQDVSVTDIACAALNGIKMGDKTLTVRRA--------NQGTTQPKPEQESVLLHAQQ 455
Query: 674 ------LLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L+ +P T+VL L V + + + + + +++LED+R EC +FGS+ VNV
Sbjct: 456 QIALQRLMLQPATLATKVLSLTEVISADELN--DDEDYQDILEDMRTECGKFGSL--VNV 511
Query: 724 V 724
V
Sbjct: 512 V 512
>gi|67541022|ref|XP_664285.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
gi|40738434|gb|EAA57624.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
Length = 624
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 178/384 (46%), Gaps = 50/384 (13%)
Query: 366 SPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
SP ++R T P + +++ +WD+ P P + + + A +A ++
Sbjct: 130 SPSRKREPTPDLTDVPSVLTRKRRLTQWDIKP------PGYENVTAEQAKLSADDLGMFP 183
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
+ Q+P+ + A + + S D+ L SN R +RL V NLP +A+ + L+ F
Sbjct: 184 LPGAPRQQPMDPSRLQAFMNQSGGGSADTSALKPSNSRQAKRLFVYNLPPNATVENLVSF 243
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI I + A +EF + D + AL DG +
Sbjct: 244 FN--LQLNGLNVIQSVDPCISAQISDDHSFALLEFKSPNDTTVALALDGITMGEHESNGE 301
Query: 536 --SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI--VKDSPHKIFIGGISRTLSSKMV 591
+ L+++RPK+++ E + ++ SG+ V DSP+KI + I + + + V
Sbjct: 302 NGAAKGLEVRRPKDYIVPNLAEQD-----LEGASGMKDVPDSPNKICVSNIPQYIPEEPV 356
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+A
Sbjct: 357 TMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPNTTTIAVQGLNGMELGDRHLKVVRA 416
Query: 650 VL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSEL 699
+ + +D N A+ + K T VL+L N+ PE +
Sbjct: 417 SIGMTQAAGLDMGVN---------AMSMFAKTTSQDLESSRVLQLLNMVTPEEL--MDNE 465
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ +DVR EC++FG V + +
Sbjct: 466 DYEEICDDVRDECSKFGRVLELKI 489
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 166/359 (46%), Gaps = 50/359 (13%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP T +P + Q +N + P + PLA S+ L +
Sbjct: 159 FDMAPPTTALLPGATDAAGQVPGTN-----PAIPGLFSNMFPLA----SSQFGALPMMPV 209
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP +A+E+++ F ++ + + G + I EK
Sbjct: 210 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKK 269
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDS 565
AFVE + E+AS A+ DG F G +K++RP ++ + G ++ S +A+V S
Sbjct: 270 FAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGS 329
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + + E++ +FG L+ F++ +D E + AF
Sbjct: 330 TPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG--FDLVKDRETGNSKGYAFC 387
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT 679
Y D VT A A LNG+K+G + LT V+ G+ N P+ LL
Sbjct: 388 VYQDVSVTDIACAALNGIKMGDKTLT-VRRANQGTTQPN---------PEQESVLLHAQQ 437
Query: 680 EVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRLECARFGSVKSVNVV 724
++ + + P ++ L+E+ + +++LED+R EC +FG++ VNVV
Sbjct: 438 QIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGAL--VNVV 494
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 153/333 (45%), Gaps = 55/333 (16%)
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQ-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG 492
P AG +M + +TQ + R RR+ V LP A+E+ + F + + + G
Sbjct: 32 PFAGTQARLLFFAGLPTMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIG 91
Query: 493 VQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---V 549
+ I +EK AFVE T E+AS A+ DG F G ++++RP ++ +
Sbjct: 92 GNTAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSM 151
Query: 550 EVASGEAEKS----VASVDSVSGIV--KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKA 603
G ++ S +A+V G D P +IF+GG+ L+ + E++ +FGPL+
Sbjct: 152 AATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRG 211
Query: 604 YHFEVNED--HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN 661
+ + D + + F Y D VT A A LNGLK+G + LT +A S+ +SG
Sbjct: 212 FDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRAT--ASV--HSGQ 267
Query: 662 P--------------------PFHGIPKH---------ALPLLKKPTEVLKLKNVFNPEG 692
P G P + + + + PT+V+ LK V +P+
Sbjct: 268 PKPDQANVLAQAQQQIALQKLALQGAPYYNMMMPGVDNGMTMPETPTKVVCLKQVVSPD- 326
Query: 693 FSSLSEL----EVEEVLEDVRLECARFGSVKSV 721
EL E EE+LED+R EC ++GSV ++
Sbjct: 327 -----ELKEDDEYEEILEDMREECGKYGSVATL 354
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 166/358 (46%), Gaps = 48/358 (13%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP + +P + Q +N S P + PLA + L +
Sbjct: 155 FDMAPPTSALLPGATDVTGQVPGAN-----PSIPGMFSNMFPLA----AGQFGALPIMPV 205
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP +A+E+++ F ++ + + G + I EK
Sbjct: 206 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKK 265
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDS 565
AFVE + E+AS A+ DG F G +K++RP ++ + G ++ S +A+V
Sbjct: 266 FAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGL 325
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + + E++ +FG L+ F++ +D E + AF
Sbjct: 326 TPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG--FDLVKDRETGNSKGYAFC 383
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP------ 673
Y D VT A A LNG+K+G + LT +A + N NP + HA
Sbjct: 384 VYQDVSVTDIACAALNGIKMGDKTLTVRRA----NQGTNQPNPEQESVLLHAQQQIALQR 439
Query: 674 LLKKP----TEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
+ +P T+VL L V S+ EL + +++LED+R+EC +FGS+ +V +
Sbjct: 440 FMLQPGALATKVLCLTQVV------SVDELNDDDDYQDILEDMRVECGKFGSLLNVVI 491
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 18/282 (6%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP A+E+ + + + + + G + I +EK AFVE
Sbjct: 153 QATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVE 212
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
T E+AS A+ DG F G ++++RP ++ + G ++ S +A+V G
Sbjct: 213 MRTVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGAA 272
Query: 571 --KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLV 626
D P +IF+GG+ L+ + E++ +FGPL+ + + D + + F Y D V
Sbjct: 273 GGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 332
Query: 627 TPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL-----LKKPTEV 681
T AIA LNGLK+G + L+ +A G + N H + A+ + L+ T+V
Sbjct: 333 TDVAIAALNGLKMGDKTLSVRRASASGQPKPDQANVLAHAQQQIAIQVFWMSPLETSTKV 392
Query: 682 LKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ L V +P+ + E +++LED++ EC ++G++ V +
Sbjct: 393 VALTQVVSPDELK--DDEEYQDILEDMKEECGKYGNLLRVVI 432
>gi|326428095|gb|EGD73665.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Salpingoeca sp. ATCC 50818]
Length = 415
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
Query: 462 PMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTA 521
P R+L VENLP + LM F+N+ + S+ + G P I C + + A +EF +
Sbjct: 34 PTRQLVVENLPEGTRDHDLMSFMNDCIASNKLITQPGQ-PVIKCTLSEDGKSAVLEFRSV 92
Query: 522 EDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK-SVASVDSVSGIVKDSPHKIFIG 580
++A+ L D F G+ L+++RP + E G + + S +VS +V+DSP+KI+IG
Sbjct: 93 DEATNGLVFDRERFKGAQLRVRRPDNY-EAPKGHITRIPMQSGANVSAVVQDSPYKIYIG 151
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLK 638
GI LS + V E++ FG LK++H + + + AF EY+D +T I LN L+
Sbjct: 152 GIPPYLSEEQVKELLEPFGQLKSFHLVMDTSTGQSKGFAFCEYMDPAITDTMIGALNDLR 211
Query: 639 VGGQVLTAVQAVLDGSIMDNSGNPPFHGIP 668
+G + L +A + G+ N P H IP
Sbjct: 212 IGEKRLLVQRASI-GARGGAQQNNPMHSIP 240
>gi|168056046|ref|XP_001780033.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668531|gb|EDQ55136.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 536
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 48/365 (13%)
Query: 389 KSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL- 447
K++ +D+AP P A M P + P G A L
Sbjct: 131 KTSGFDMAP------PGGTIVPGAAVPGQISGMPPQMPGVFPSMFPFGG----AQFGGLP 180
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
+ ++ Q+ R RR+ V LP A+E+ + + + + + G + I
Sbjct: 181 GMPAQAMTQQQATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYI 240
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----V 560
+EK AFVE T E+AS A+ DG F G ++++RP ++ + G ++ S +
Sbjct: 241 NQEKKFAFVEMRTVEEASNAMSLDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNL 300
Query: 561 ASVDSVSGIV--KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPC 616
A+V G D P +IF+GG+ L+ + E++ +FGPL+ + + D + +
Sbjct: 301 AAVGLTPGAAGGADGPDRIFVGGLPYYLTEPQIKELLESFGPLRGFDLVKDRDTGNSKGY 360
Query: 617 AFIEYVDQLVTPK-AIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL 675
F Y D VT AIA LNGLK+G + L+ +A S G P P A L+
Sbjct: 361 GFCVYQDPSVTTDVAIAALNGLKMGDKTLSVRRA----SARYGIGQPK----PDQANVLI 412
Query: 676 KKPTEV---LKLKNVFNPEGFSSLSEL--------------EVEEVLEDVRLECARFGSV 718
++ + LK + + + F++ E +E+LED+R+EC ++G++
Sbjct: 413 HAQQQIALQVTLKMLLHRKTFTAAWTFYAQVVTPNQLEDDEEYQEILEDMRMECGKYGNL 472
Query: 719 KSVNV 723
+V +
Sbjct: 473 LNVVI 477
>gi|302854386|ref|XP_002958701.1| hypothetical protein VOLCADRAFT_121741 [Volvox carteri f.
nagariensis]
gi|300255941|gb|EFJ40221.1| hypothetical protein VOLCADRAFT_121741 [Volvox carteri f.
nagariensis]
Length = 294
Score = 107 bits (268), Expect = 3e-20, Method: Composition-based stats.
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 10/183 (5%)
Query: 476 SEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF 535
SE +L + NN ++++G G P I C + EK AF+EF + E+ S A+ DG
Sbjct: 2 SEVSLTQLFNNVMMAAGATTQPGG-PVISCYMNNEKRFAFLEFRSVEETSNAMAFDGLQC 60
Query: 536 SGSILKIKRPKEFVEVAS---GEAEKS----VASVDSVSGIVKDSPHKIFIGGISRTLSS 588
G LK++RP ++ A+ G E S +A + V+ +V+D P+K+F+GG+ LS
Sbjct: 61 QGETLKVRRPHDYNPAAAKLLGPTEPSAKINLALLGVVNTLVEDGPNKVFVGGLPGYLSE 120
Query: 589 KMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTA 646
+ V +I+ AFGPL+A++ + D + F EY D +T AI GL+ L VGG+ LT
Sbjct: 121 EQVRQILQAFGPLRAFNLVTDRDTGASKGYGFCEYADPNITDVAIQGLSALIVGGKPLTV 180
Query: 647 VQA 649
+A
Sbjct: 181 RRA 183
>gi|388520789|gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 42/324 (12%)
Query: 435 LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ 494
L GIS + L++ Q+ R RR+ + LP +E+++ F ++ + + G
Sbjct: 151 LFGIS-QPQIGALSLMQVQPMTQQATRHARRVYIGGLPPLTNEQSIATFFSHVMTAIGGN 209
Query: 495 HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEV 551
+ I EK AF+E T E+AS A+ DG F G ++++RP ++ +
Sbjct: 210 SAGAGDSVVNVYINHEKKFAFLEMRTVEEASNAMSLDGIVFEGVSVRVRRPTDYNPTLAA 269
Query: 552 ASGEAEKS----VASVDSVSGIV--KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH 605
A G + S +++V G + D +IF+GG+ + + + E++ AFGPL++
Sbjct: 270 ALGPCQPSPYLNLSAVGLSGGTIGGTDGLDRIFVGGLPYYFAEEQIRELLQAFGPLRS-- 327
Query: 606 FEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS------- 654
F++ D E + F Y D VT A A LNGLKVG + LT +A + G
Sbjct: 328 FDLVRDKETGNSKGYGFCIYQDPAVTDMACASLNGLKVGDKTLTVRRATVSGHSKTEQEH 387
Query: 655 --------------IMDNSG-NPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSEL 699
++ G N P G+ + + + T+VL L + +
Sbjct: 388 IFAQAQQNITMQKVALEVVGLNIP--GVERVPTTIDESATKVLCLTEAITTDEL--MDNG 443
Query: 700 EVEEVLEDVRLECARFGSVKSVNV 723
E EE++ED+R EC +FG++ +V +
Sbjct: 444 EYEEIVEDMRDECGKFGTLMNVVI 467
>gi|355727237|gb|AES09128.1| U2 small nuclear RNA auxiliary factor 2 [Mustela putorius furo]
Length = 301
Score = 107 bits (267), Expect = 3e-20, Method: Composition-based stats.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 21/264 (7%)
Query: 368 RKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPV 427
R + E SP + +K WDV P + + + QAA
Sbjct: 54 RGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG------------ 101
Query: 428 TSTTQKPLAGISVSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLN 485
Q P + + + L V+ V + +Q R RRL V N+P +E+A+M+F N
Sbjct: 102 ----QIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFN 157
Query: 486 NFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRP 545
+ G+ G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP
Sbjct: 158 AQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRP 216
Query: 546 KEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH 605
++ + SV VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++
Sbjct: 217 HDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFN 276
Query: 606 F--EVNEDHEEPCAFIEYVDQLVT 627
+ + AF EYVD VT
Sbjct: 277 LVKDSATGLSKGYAFCEYVDINVT 300
>gi|452841884|gb|EME43820.1| hypothetical protein DOTSEDRAFT_71600 [Dothistroma septosporum
NZE10]
Length = 433
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 174/397 (43%), Gaps = 64/397 (16%)
Query: 368 RKRRTEAAAKTPSPINRSPE----------------KKSAKWDVAPVETYSVPSNVHTSN 411
R+ + A K+ SP R P+ ++ +WD+ P +V T+
Sbjct: 2 RQLERQTARKSASPPPRKPKEPTPDLTEVTSVLERKRRLTQWDIKPPGYENV-----TAE 56
Query: 412 QAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSN-RPMRRLCVEN 470
QA S + + Q+P+ + A + + + L S R +RL + N
Sbjct: 57 QAKLSGMFPLPGA-----PRQQPMDPQKLQAFMNQPGGEANKTALKPSTARQSKRLLIYN 111
Query: 471 LPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCC 530
+P SA+E +M+F N L +G+ G+ PCI + ++K A +EF T EDA+ A+
Sbjct: 112 IPASATEDTIMDFFN--LQLNGLNVTRGADPCISAQLSQDKAYALLEFKTPEDATNAMAF 169
Query: 531 DGCSFSGSI---------------LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPH 575
DG + L IKRPK+++ + ++ A V +S +V D+ +
Sbjct: 170 DGINMEPEAMVTSGNEDENGGARGLDIKRPKDYIVPVVTDGTENDAGV--LSNVVPDTQN 227
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAG 633
KI I I + + ME++ +FG LK + + EE AF EY D T A+
Sbjct: 228 KISITNIPAYVDEEQTMELLNSFGELKNFVLVKDASTEESRGIAFCEYKDPNSTKVAVES 287
Query: 634 LNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKN 686
L+G+ +G + A + I SG + +A+ L+ VL L N
Sbjct: 288 LHGMTLGDAAMKVRLASI--GIQQVSGE-----MSVNAMSLMAGTARADGEGGRVLSLMN 340
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PE + E +E+LEDV+ ECA++G + V +
Sbjct: 341 MITPEEL--MDPDEADEILEDVKEECAKYGPLLDVKM 375
>gi|168036006|ref|XP_001770499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678207|gb|EDQ64668.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 591 VMEIVCAFGPLKAYHFEVNEDHEEPC--AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 648
V EI+ AFG LK++H++ + C AF EY+D VT +A GLNG+ +GGQVLT +Q
Sbjct: 14 VKEIITAFGQLKSFHWKTMHHNNGGCSIAFFEYLDPTVTHQACKGLNGMNLGGQVLTVLQ 73
Query: 649 AVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDV 708
A D S NPPF+ IP+ ALPLL+ PT VL++ N+ + E + + +V +++EDV
Sbjct: 74 ATPDAKYEVFSKNPPFYDIPEEALPLLETPTNVLEIHNLVSEEEVLHMQDKDVRKLMEDV 133
Query: 709 RLE 711
R+E
Sbjct: 134 RIE 136
>gi|331243454|ref|XP_003334370.1| splicing factor U2AF subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 600
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 143/306 (46%), Gaps = 42/306 (13%)
Query: 454 VQLTQS-NRPMRRLCVENLPLSASEKALMEFLNN-----FLLS----SGVQHVHGSLPCI 503
V TQS R RRL V N+ +A+E + EF N LL+ G+ P +
Sbjct: 213 VAQTQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVV 272
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ EK AFVEF AE+A+ + DG F LKI+RPK++ +G +
Sbjct: 273 AVQVNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDY----TGPDHAGPTHI 328
Query: 564 DS-VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH----EEPCAF 618
VS V DSP+KIFIGG+ L+ VME++ +FG LK+++ + + AF
Sbjct: 329 PGVVSTNVPDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGHVSKGFAF 388
Query: 619 IEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP------------FHG 666
EYVD +T A GLNG+++G + L +A + + N P F G
Sbjct: 389 CEYVDPDLTDIACQGLNGMELGDRYLVVQRAQIGQNAKKEKENNPDGQRNNYNQFNNFAG 448
Query: 667 IPKHALPLLK---------KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGS 717
A + T VL++ N+ N E + + E E+LED+R EC ++G
Sbjct: 449 GQATAAASSVLAAVKSGEGEKTRVLQMLNMVNQEEL--VDDQEYGEILEDIRDECGKYGK 506
Query: 718 VKSVNV 723
++ V +
Sbjct: 507 IEGVRI 512
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 34/315 (10%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R +RL +NLP +E+ + F ++FL S P I + A +EF
Sbjct: 248 SRQAKRLLCQNLPPMCTEETIYSFFSSFLKSLNAVDSENE-PLITVYLNPTGTMAMLEFR 306
Query: 520 TAEDASAALCCDGCSFSGSILKIK--RPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKI 577
+ A+ L DG F + +KI+ RPK+++ +E S + +S V DS +KI
Sbjct: 307 STAYATLCLAFDGMEFDDTEVKIRLSRPKDYI--IPQYSESSESHNGDISPNVPDSINKI 364
Query: 578 FIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLN 635
+ I L+ + VME++ FGPLK++ +++ +E AF EY+D + AI GLN
Sbjct: 365 CVSNIPTHLADQQVMELLQTFGPLKSFFLVKDKEMDESKGVAFCEYLDPNIAEIAIEGLN 424
Query: 636 GLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVF 688
GL + Q+L +A + + ++G GIP A+ ++ T VL+L N+
Sbjct: 425 GLDINEQLLNVKRASI--GVKQSAGAE--AGIP--AMTVIAATTSAEMEGGRVLQLLNMV 478
Query: 689 NPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTASAGV 748
+ L + E EE+LEDV EC +FG + + + + GN+ A+AGV
Sbjct: 479 TADEL--LDQEEYEEILEDVTDECNKFGPIIDIKIPR-----------PSGNQR-AAAGV 524
Query: 749 GQNLTNDETNEKGER 763
G+ E +E E+
Sbjct: 525 GKIYVRFEEHESAEK 539
>gi|168028774|ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681881|gb|EDQ68304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 486
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 35/352 (9%)
Query: 389 KSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLN 448
K++ +D+AP P + Q M + P P G L
Sbjct: 96 KTSGFDMAP------PGATVVAGQIPG-----MPPAMPGVFPAMFPFGGTQQFGGLP--- 141
Query: 449 VSMDSVQLTQ-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
M + +TQ + R RR+ V LP A+E+ + + + + + G + I
Sbjct: 142 -GMPAQAMTQQATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYI 200
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----V 560
+EK AFVE T E+AS A+ DG F G ++++RP ++ + G ++ S +
Sbjct: 201 NQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNL 260
Query: 561 ASVDSVSGIV--KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPC 616
A+V G D P +IF+GG+ L+ + E++ +FGPL+ + + D + +
Sbjct: 261 AAVGLTPGAAGGADGPDRIFVGGLPYYLTEVQIKELLESFGPLRGFDLVKDRDTGNSKGY 320
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLL- 675
F Y D V A A LNG+K+ + L +A G + N H + A+ L
Sbjct: 321 GFCVYQDPSVVDIACATLNGMKMDDKTLNVRRATASGQPKPDQANVLAHAQQQIAIQKLA 380
Query: 676 ---KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
K PT+V+ L V P + E +E++ED+ EC ++G++ VN V
Sbjct: 381 LQAKTPTKVVALTEVVTPNQLE--DDEEYQEIMEDMGTECGKYGTL--VNCV 428
>gi|112490659|pdb|2G4B|A Chain A, Structure Of U2af65 Variant With Polyuridine Tract
Length = 172
Score = 106 bits (265), Expect = 6e-20, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 23/188 (12%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+EF + ++
Sbjct: 5 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDE 63
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
+ A+ DG F G LKI+RP ++ + HK+FIGG+
Sbjct: 64 TTQAMAFDGIIFQGQSLKIRRPHDYQPLPGA--------------------HKLFIGGLP 103
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGLNG+++G
Sbjct: 104 NYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGD 163
Query: 642 QVLTAVQA 649
+ L +A
Sbjct: 164 KKLLVQRA 171
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 45/362 (12%)
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
++ +D+AP + + + Q +N + P PLA + + L V
Sbjct: 201 TSGFDMAPPASAMLAGASAVAGQITGAN-----PTIPGMFPNMFPLATNQMQ-QFSALPV 254
Query: 450 SMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQR 509
Q+ R RR+ V LP +A+E+++ F + + G + I
Sbjct: 255 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDAVVNVYINH 314
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVAS 562
+K AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ ++ +
Sbjct: 315 DKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNLNLGA 374
Query: 563 VDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPC 616
V G D P +IF+GG+ + + E++ FGPL+ F++ +D E +
Sbjct: 375 VGLTPGSAGGLDGPDRIFVGGLPYYFTETQIRELLETFGPLRG--FDLVKDRETGNSKGY 432
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK 676
AF Y D VT A A LNG+K+G + LT +A N G P P+ L+
Sbjct: 433 AFCVYQDLAVTDIACAALNGIKMGDKTLTVRRA--------NQGANPQQPKPEQESILMH 484
Query: 677 KPTEVLKLKNVFNPEGFS----------SLSEL----EVEEVLEDVRLECARFGSVKSVN 722
++ K + P + S EL + +E+L+D+R EC++FG++ VN
Sbjct: 485 AQQQIALQKLMLQPALVATKVVCLTHAVSSDELKDDEDYDEILDDMRQECSKFGTL--VN 542
Query: 723 VV 724
VV
Sbjct: 543 VV 544
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 40/287 (13%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R R++ V LP +E+ + F N +++ G + I +EK AFVE
Sbjct: 17 QATRHARQVYVGGLPGLVNEQTIATFFNQVMVNVGGNTAGPGDVVVNVYINQEKKFAFVE 76
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
T E+AS A+ DG SF G ++++RP ++ V G ++ S +A+V G
Sbjct: 77 MRTVEEASNAMALDGISFQGVSVRVRRPSDYNPSVAANLGPSQPSPSLNLAAVGLTPGAG 136
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
D P +IF+GG+ L+ + E++ +FGPL+ F++ +D E + F Y D
Sbjct: 137 GGVDGPDRIFVGGLPYYLTEPQIRELLESFGPLRG--FDLVKDRESGNSKGYGFCVYQDP 194
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKL 684
VT A A LNGLK+G + LT +A +G H H L L K L +
Sbjct: 195 NVTDVACAALNGLKMGDRTLTVRRATANGQQAGQD-----H---AHILSLAKS----LTM 242
Query: 685 KNVFNPEGFSSL---------SEL----EVEEVLEDVRLECARFGSV 718
VF EG + + +EL + +E+LED+R EC +FG+V
Sbjct: 243 NGVFPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKFGTV 289
>gi|449802099|pdb|3VAF|A Chain A, Structure Of U2af65 Variant With Bru3 Dna
gi|449802100|pdb|3VAF|B Chain B, Structure Of U2af65 Variant With Bru3 Dna
gi|449802101|pdb|3VAG|A Chain A, Structure Of U2af65 Variant With Bru3c2 Dna
gi|449802102|pdb|3VAG|B Chain B, Structure Of U2af65 Variant With Bru3c2 Dna
gi|449802103|pdb|3VAH|A Chain A, Structure Of U2af65 Variant With Bru3c4 Dna
gi|449802104|pdb|3VAH|B Chain B, Structure Of U2af65 Variant With Bru3c4 Dna
gi|449802105|pdb|3VAI|A Chain A, Structure Of U2af65 Variant With Bru3c5 Dna
gi|449802106|pdb|3VAI|B Chain B, Structure Of U2af65 Variant With Bru3c5 Dna
gi|449802107|pdb|3VAJ|A Chain A, Structure Of U2af65 Variant With Bru5c6 Dna
gi|449802108|pdb|3VAJ|B Chain B, Structure Of U2af65 Variant With Bru5c6 Dna
gi|449802109|pdb|3VAK|A Chain A, Structure Of U2af65 Variant With Bru5 Dna
gi|449802110|pdb|3VAK|B Chain B, Structure Of U2af65 Variant With Bru5 Dna
gi|449802113|pdb|3VAL|A Chain A, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802114|pdb|3VAL|B Chain B, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802115|pdb|3VAL|D Chain D, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802116|pdb|3VAL|I Chain I, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802117|pdb|3VAM|A Chain A, Structure Of U2af65 Variant With Bru5c2 Dna
gi|449802118|pdb|3VAM|B Chain B, Structure Of U2af65 Variant With Bru5c2 Dna
Length = 174
Score = 106 bits (264), Expect = 7e-20, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 23/188 (12%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+EF + ++
Sbjct: 7 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDE 65
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
+ A+ DG F G LKI+RP ++ + HK+FIGG+
Sbjct: 66 TTQAMAFDGIIFQGQSLKIRRPHDYQPLPGA--------------------HKLFIGGLP 105
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGLNG+++G
Sbjct: 106 NYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGD 165
Query: 642 QVLTAVQA 649
+ L +A
Sbjct: 166 KKLLVQRA 173
>gi|344251408|gb|EGW07512.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 422
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 117/214 (54%), Gaps = 10/214 (4%)
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKI 577
F + ++ + A+ DG F G LKI+RP ++ + SV VS +V DS HK+
Sbjct: 25 FRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKL 84
Query: 578 FIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLN 635
FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGLN
Sbjct: 85 FIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLN 144
Query: 636 GLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVFN 689
G+++G + L +A + + + P G+ + + PTEVL L N+
Sbjct: 145 GMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVL 204
Query: 690 PEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE L + E EE++EDVR EC+++G VKS+ +
Sbjct: 205 PE--ELLDDEEYEEIVEDVRDECSKYGLVKSIEI 236
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 40/287 (13%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R R++ V LP +E+ + F N +++ G + I +EK AFVE
Sbjct: 24 QATRHARQVYVGGLPGLVNEQTIATFFNQVMVNVGGNTAGPGDVVVNVYINQEKKFAFVE 83
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
T E+AS A+ DG SF G ++++RP ++ V G ++ S +A+V G
Sbjct: 84 MRTVEEASNAMALDGISFQGVSVRVRRPSDYNPSVAANLGPSQPSPSLNLAAVGLTPGAG 143
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
D P +IF+GG+ L+ + E++ +FGPL+ F++ +D E + F Y D
Sbjct: 144 GGVDGPDRIFVGGLPYYLTEPQIRELLESFGPLRG--FDLVKDRESGNSKGYGFCVYQDP 201
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKL 684
VT A A LNGLK+G + LT +A +G H H L L K L +
Sbjct: 202 NVTDVACAALNGLKMGDRTLTVRRATANGQQAGQD-----H---AHILSLAKS----LTM 249
Query: 685 KNVFNPEGFSSL---------SEL----EVEEVLEDVRLECARFGSV 718
VF EG + + +EL + +E+LED+R EC +FG+V
Sbjct: 250 NGVFPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKFGTV 296
>gi|384500209|gb|EIE90700.1| hypothetical protein RO3G_15411 [Rhizopus delemar RA 99-880]
Length = 490
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 149/358 (41%), Gaps = 81/358 (22%)
Query: 381 PINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISV 440
P+++ P +K WD+AP E +++ V T PL G V
Sbjct: 146 PLSKRP-RKLHNWDMAPA-------------------GMEGMTAQQVKMTGLFPLPGQVV 185
Query: 441 ------SASLAKLNVSMDSVQLTQSN----RPMRRLCVENLPLSASEKALMEFLNNFLLS 490
S +N D ++ +N + RRL V +P EK L +F N +
Sbjct: 186 GTRTPQSFQPPPVNNKFDDSRILAANTTATKQARRLYVGQIPPGLEEKPLADFFNATMHQ 245
Query: 491 SGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVE 550
+Q P I EK AFVEF TAE A+A + DG F G LKI+RPK++
Sbjct: 246 LQMQ---DRTPVAAVQINHEKSYAFVEFQTAEQATACMAFDGIMFQGQQLKIRRPKDYQP 302
Query: 551 VASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE 610
A G+ + + VS V D+P+KIFIGG+ L+ V+E++ +FG K
Sbjct: 303 PAEGDVSMQLPGL--VSTNVPDTPNKIFIGGLPVYLNDDQVIELLKSFGDRK-------- 352
Query: 611 DHEEPCAFIEYVDQLVTPKAIAGLNGLK---VGGQVLTAVQAVLDGSIMDNSGNPPFHGI 667
L+ +A G + + G +L A + + D++
Sbjct: 353 --------------LIVQRASVGAKHIPPDYMSGPMLPANYVPVTSAKEDDA-------- 390
Query: 668 PKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK 725
T VL+L N+ PE + E +++ ED+ ECA+FG+V + + K
Sbjct: 391 -----------TRVLQLMNMVTPEELE--DDEEYQDIWEDIAEECAKFGNVLDMKIPK 435
>gi|255073589|ref|XP_002500469.1| RNA binding protein [Micromonas sp. RCC299]
gi|226515732|gb|ACO61727.1| RNA binding protein [Micromonas sp. RCC299]
Length = 489
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 58/339 (17%)
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG--VQHVHGSLPCIGC 505
N+ ++ V Q+ R RR+ V NLP + +E + F NN + + G V + G P +
Sbjct: 109 NLGLNPVPNQQATRHARRVYVGNLPGTVTEPKVAAFFNNAMHAIGGTVAALPGD-PVLNV 167
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKS------ 559
I EK AFVEF T E+ S + DG G ++++RP ++ +A+ S
Sbjct: 168 YINYEKKFAFVEFRTVEETSNCMALDGAVLEGIAMRVRRPNDYNVMAASSLGPSQPKDGL 227
Query: 560 ---------------VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
A + S +D H++FIGG+ L+ MV E+V AFGP K +
Sbjct: 228 NLEAIGLNPAAAGGGGAGAANASLTEEDLQHRLFIGGLPYFLTETMVKELVEAFGPTKQF 287
Query: 605 HFEVNED--HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS-------- 654
V+ + + + F Y D VT A GL+G+K+G + LT +A+ G+
Sbjct: 288 QLVVDRETGNSKGYGFFVYQDHSVTDVACQGLHGMKMGEKSLTVQRAMQGGAGAPKPTAA 347
Query: 655 ------------------IMDNSGNPPFHGIPKHALPLLKKP-TEVLKLKNVFNPEGFSS 695
+ SG P +P P + P + V+ L + + E
Sbjct: 348 SVGPGHTALPGADEVAAHLAGASGAPAGLSVPP---PPSEHPASRVVSLTEMLDVEELR- 403
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTI 734
++E E++ED+R EC +FG ++S+ + + GD++ + +
Sbjct: 404 -DDVEYGEIMEDMREECGKFGRIESIVIPRPGDADGAAV 441
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 49/315 (15%)
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSL 500
+ L V Q+ R RR+ V LP +A+E+++ F ++ + + G
Sbjct: 194 AGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGD 253
Query: 501 PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAE 557
+ I EK AFVE + E+AS A+ DG F G +K++RP ++ + G ++
Sbjct: 254 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQ 313
Query: 558 KS----VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED 611
S +A+V G + P +IF+GG+ + + E++ +FG L+ F++ +D
Sbjct: 314 PSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG--FDLVKD 371
Query: 612 HE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG----NPP 663
E + AF Y D VT A A LNG+K+G + LT +A N G NP
Sbjct: 372 RETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRA--------NQGITQPNPE 423
Query: 664 FHGIPKHALP------LLKKP----TEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVR 709
+ HA + +P T++L L V S+ EL + +++LED+R
Sbjct: 424 QESVLLHAQQQIALQRFMLQPGALATKILCLTQVV------SVDELKDDDDYQDILEDMR 477
Query: 710 LECARFGSVKSVNVV 724
+EC +FG++ +NVV
Sbjct: 478 IECGKFGAL--LNVV 490
>gi|402223467|gb|EJU03531.1| hypothetical protein DACRYDRAFT_77158 [Dacryopinax sp. DJM-731 SS1]
Length = 392
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 27/276 (9%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ +E+ L FL L G++ + + EK A++EF +D
Sbjct: 57 RRLYIGDITPDTTEENLTAFLKKTLPELGIKVEGEDVGFEEVRVSHEKNYAYIEFSNPDD 116
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVE-----VASGEAEKSVASVDSVSGIVKDSPHKIF 578
A+ + DG F G LKI+RP +++ V G V S + V DS +KIF
Sbjct: 117 ATKTMELDGTVFLGQPLKIRRPHDYLSATDLAVVFGGIVPGVVSTN-----VPDSINKIF 171
Query: 579 IGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNG 636
+GG+ L+ VME++ FG L+A++ + + + AF EY+D VT A GLNG
Sbjct: 172 VGGLPTYLNEAQVMELLQTFGELRAFNLVKDGSTGVSKGFAFFEYMDPGVTDVACQGLNG 231
Query: 637 LKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIP-------KHALPL--LKKPTEVLKLKNV 687
+++G + L +A SI N P +P LP+ P+ +L L N+
Sbjct: 232 MELGDRYLVVQRA----SIGANPTKPNMPNMPGTLPPPRPAILPVDNTNPPSPILLLLNM 287
Query: 688 FNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
E L + + E++LEDVR E RFG V + +
Sbjct: 288 VTAE--ELLQDQDYEDILEDVREEMGRFGPVIDIKI 321
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 49/315 (15%)
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSL 500
+ L V Q+ R RR+ V LP +A+E+++ F ++ + + G
Sbjct: 195 AGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGD 254
Query: 501 PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAE 557
+ I EK AFVE + E+AS A+ DG F G +K++RP ++ + G ++
Sbjct: 255 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQ 314
Query: 558 KS----VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED 611
S +A+V G + P +IF+GG+ + + E++ +FG L+ F++ +D
Sbjct: 315 PSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG--FDLVKD 372
Query: 612 HE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG----NPP 663
E + AF Y D VT A A LNG+K+G + LT +A N G NP
Sbjct: 373 RETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRA--------NQGITQPNPE 424
Query: 664 FHGIPKHALP------LLKKP----TEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVR 709
+ HA + +P T++L L V S+ EL + +++LED+R
Sbjct: 425 QESVLLHAQQQIALQRFMLQPGALATKILCLTQVV------SVDELKDDDDYQDILEDMR 478
Query: 710 LECARFGSVKSVNVV 724
+EC +FG++ +NVV
Sbjct: 479 IECGKFGAL--LNVV 491
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPM 463
V +QA + A +V++ + P+ G+ V +L L Q+ R
Sbjct: 189 VSGFDQAPTQQALPIVAAGVIPGQLPGVTAPIPGVGVLPNLYNLAAGQPQAMTQQATRHA 248
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RR+ V LP +A+E+ + F N + + G + I +K AFVE + E+
Sbjct: 249 RRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 308
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGIVKDS------P 574
AS A+ DG F G+ +KI+RP ++ + A G ++ + S G+ S P
Sbjct: 309 ASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGLTPGSAGGLEGP 368
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKA 630
+IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D VT A
Sbjct: 369 DRIFVGGLQYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDLNVTDIA 426
Query: 631 IAGLNGLKVGGQVLTAVQA 649
A LNG+K+G + LT +A
Sbjct: 427 CAALNGIKMGDKTLTVRRA 445
>gi|392572624|gb|EIW65769.1| hypothetical protein TREMEDRAFT_41238 [Tremella mesenterica DSM
1558]
Length = 596
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 48/354 (13%)
Query: 389 KSAKWDVAPVETYSVP------SNVHTSNQAASSNAHEM-VSSDPVTSTTQKPLAGISVS 441
K + WD+ PV+ + + + T E+ + S + + P A
Sbjct: 172 KHSLWDIRPVQFAGIGAMAAKMTGMFTYGPGRVPPPPELGIPSALIAGSFPPPGA----- 226
Query: 442 ASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLP 501
R +R+ V + S ++ +L+EF N + G P
Sbjct: 227 ----------------NGLRQAKRIYVGGITESMTDASLLEFFNTTMSERGFTLEIPGDP 270
Query: 502 CIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVA 561
+ EK AF+EF +AE+AS+AL D F L++KRPK++ + + ++
Sbjct: 271 IGAVQVNHEKAFAFLEFRSAEEASSALKLDNVMFEDVPLRVKRPKDYTGLDP--LQHTMG 328
Query: 562 SVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEE--PCAFI 619
++S DSP+K+FIGG+ L VME++ +FG L++++ + D E AF
Sbjct: 329 GAQAMS----DSPNKLFIGGLPTYLDEAQVMELLKSFGELRSFNLVKDPDSSENKGFAFA 384
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL---DGSIMDNSGNPPFHGIPKHALPLLK 676
EY D T AI+GLN +G ++L +A + G+ G+ F + K A+ +
Sbjct: 385 EYTDPSNTDMAISGLNNFSLGDRILVVQRAAVGRASGTTDAIPGSESF--LAKSAIFAQE 442
Query: 677 K----PT-EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK 725
PT V+ L N+ + + E +E+LED+ EC+RFG ++ V V +
Sbjct: 443 NQQSGPTSRVMLLLNMVTADEL--YDDQEYQEILEDITSECSRFGEIEGVRVPR 494
>gi|388580158|gb|EIM20475.1| hypothetical protein WALSEDRAFT_55089 [Wallemia sebi CBS 633.66]
Length = 391
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 141/270 (52%), Gaps = 19/270 (7%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLS-SGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
R RR+ + +L + +E+ L + N+ + + V + G P + ++ ++G A++EF
Sbjct: 30 RASRRVFIGDLKPNHNEENLTKLFNDKMSTIDQVAKIPGE-PVVNVTVKHDRGYAYIEFR 88
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFI 579
++A+ AL DG F G ++IKRP+E ++ E +VSG V DS KIF+
Sbjct: 89 NTDEAAYALQFDGTIFQGEGIQIKRPQEVLD------ELQRKQGHTVSGTVPDSDQKIFV 142
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGL 637
G + L+ + VME++ +FG L++++ E D + AF EY+D +T AI GLNG+
Sbjct: 143 GSLPTFLNDEQVMELLGSFGELRSFNLVKEGTSDVSKGFAFCEYMDPALTDIAIQGLNGM 202
Query: 638 KVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP----TEVLKLKNVFNPEGF 693
+VG + L VQ G M G I LPL + T VL L N+ E
Sbjct: 203 EVGDRKLV-VQRSSTGP-MGKIGVGGTSSI-AQILPLASETQAYRTNVLLLLNMVTAEEL 259
Query: 694 SSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+L+ +E+ ED++ EC+++G + + +
Sbjct: 260 K--DDLDYQEICEDIQEECSQYGEIIKIKI 287
>gi|396472864|ref|XP_003839217.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
gi|312215786|emb|CBX95738.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
Length = 587
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 101/197 (51%), Gaps = 14/197 (7%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
+RL V NLP S + LMEF N L +G+ V G PC+ I K A +EF T ED
Sbjct: 267 KRLYVHNLPSGVSSEELMEFFN--LQLNGLNVVSGQDPCLSAQIATSKEYAALEFKTPED 324
Query: 524 ASAALCCDGCSF---SG----SILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
A+ AL +G S SG S L I+RPK+++ + A+ + + D VS +VKDSP+K
Sbjct: 325 ATVALAMNGISMREESGGPDRSGLSIRRPKDYI---TPTADDNAYTGDEVSSVVKDSPNK 381
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE--DHEEPCAFIEYVDQLVTPKAIAGL 634
+ I I + + V E+V G LKA+ +E D AF EY D + I GL
Sbjct: 382 LSIVNIPTYIEEEQVRELVGTMGKLKAFVLVKDESTDQHRGIAFCEYADNEIVDAVIEGL 441
Query: 635 NGLKVGGQVLTAVQAVL 651
N + +G L +A +
Sbjct: 442 NDIPLGDGNLKVTRATV 458
>gi|414591745|tpg|DAA42316.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPM 463
V +QA + A +V++ + P+ G+ V +L L Q+ R
Sbjct: 189 VSGFDQAPTQQALPIVAAGVIPGQLPGVTAPIPGVGVLPNLYNLAAGQPQAMTQQATRHA 248
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RR+ V LP +A+E+ + F N + + G + I +K AFVE + E+
Sbjct: 249 RRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 308
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGIVKDS------P 574
AS A+ DG F G+ +KI+RP ++ + A G ++ + S G+ S P
Sbjct: 309 ASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGLTPGSAGGLEGP 368
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKA 630
+IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D VT A
Sbjct: 369 DRIFVGGLQYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDLNVTDIA 426
Query: 631 IAGLNGLKVGGQVLTAVQA 649
A LNG+K+G + LT +A
Sbjct: 427 CAALNGIKMGDKTLTVRRA 445
>gi|358369529|dbj|GAA86143.1| splicing factor u2af large subunit [Aspergillus kawachii IFO 4308]
Length = 571
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 56/385 (14%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 157 PRKREATPDLTDIVSVLDR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 208
Query: 426 PVTSTTQKPLAGISVSASLAK-LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + + D+ L SN R +RL V N+P + + + L+ F
Sbjct: 209 ----PRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPQTVTGETLLAF 264
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI + ++ A +EF + DA+ AL DG +
Sbjct: 265 FNVQL--NGLNVIESVDPCISAQVAQDHSFALLEFKSPNDATVALAFDGIAMEEHEAAGN 322
Query: 536 -----SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKM 590
+ L+++RPK+++ E E + V DSP+KI + I + +
Sbjct: 323 GAANGAAQGLEVRRPKDYIVPGGAEQEYQEGVL---LNEVPDSPNKICVSNIPHYIPEEP 379
Query: 591 VMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 648
V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+
Sbjct: 380 VTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLKVVR 439
Query: 649 AVL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSE 698
A + + +D N A+ + K T VL+L N+ PE +
Sbjct: 440 ASIGMTQAAGLDMGVN---------AMSMFAKTTSQDLETSRVLQLLNMVTPEEL--MDP 488
Query: 699 LEVEEVLEDVRLECARFGSVKSVNV 723
+ EE+ +DVR EC+++G+V + V
Sbjct: 489 EDYEEICDDVRDECSKYGTVVELKV 513
>gi|353240191|emb|CCA72072.1| related to pre-mRNA splicing factor U2AF large chain
[Piriformospora indica DSM 11827]
Length = 403
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 43/289 (14%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + ++ A E+++ F N+ + + + P + + REK AFVEF +AED
Sbjct: 47 RRLYLGSITPLADEESIALFFNSQMRERKLT-TSSAPPVLAVQVNREKNYAFVEFRSAED 105
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-VSGIVKDSPHKIFIGGI 582
A+A + DG F L+++RP ++ A EA VA + + + DS +KIFIG +
Sbjct: 106 ATAGMALDGTVFLDGPLRVRRPHDY---AGPEAMTGVAGFATLLPATMPDSVNKIFIGNL 162
Query: 583 SRTLSSKMVMEIVCAFGPLKAYH------------------FEVNEDHEEPCAFIEYVDQ 624
L+ ++E++ +FG LKA++ +N + AF+EY D
Sbjct: 163 PTHLTEDQIVELLKSFGELKAFNLVREHGTNVSKVFTVRITLSMNLTGSQGFAFVEYADP 222
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHAL----PLLKKPT- 679
VT A LNG+ +G + L +A S+ G P IP A+ P++
Sbjct: 223 AVTDIATESLNGMDLGDKKLVVQRA----SVGAKGGVP----IPPEAMDIPAPIVAVDLN 274
Query: 680 -----EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
V+ + N+ E + ++E EE+L+D+R EC+ FG V V V
Sbjct: 275 KEANGRVVLMLNMVVAEDL--MDDVEYEEILDDIRSECSGFGQVLGVYV 321
>gi|402073699|gb|EJT69251.1| splicing factor U2AF 50 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 623
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 142/289 (49%), Gaps = 27/289 (9%)
Query: 454 VQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
V L +N R +RL V N +E+AL+ F+N L +G+ + + PC+ C + +
Sbjct: 285 VTLKPTNSRQSKRLIVTNFAPGTTEEALVAFMN--LQLNGLNVIESTDPCLLCQMAPDSS 342
Query: 513 QAFVEFLTAEDASAALCCDGCSFSG-------------SILKIKRPKEFVEVASGEAEKS 559
A +EF + + + AL DG + L+++RPK+++ A E
Sbjct: 343 FAILEFRSPAETTVALALDGITMEAEDTPMEGAANGTPQGLELRRPKDYIVPAVVEDTGY 402
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CA 617
V VS V D+PHKI I ++ L+ + V E++ +FG LKA + EE A
Sbjct: 403 ERGV--VSSRVVDTPHKIGITNLAPYLTEEQVTELLVSFGELKALVLVKDSGTEESRGIA 460
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG-NPPFHGIPKHALPLLK 676
F EYVD + T AI GLN +++G + L +A + I SG + + A + +
Sbjct: 461 FCEYVDPVATDVAIHGLNNMELGEKRLRVKKASI--GITQVSGIEMGINAMSMLAGTVAQ 518
Query: 677 KP--TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P + VL+L N+ + L + EE+ +DVR EC++FG++ + +
Sbjct: 519 DPDLSRVLQLLNMVTADEL--LDNDDYEEICDDVREECSKFGTILELKI 565
>gi|317029342|ref|XP_001391373.2| splicing factor u2af large subunit [Aspergillus niger CBS 513.88]
Length = 561
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 56/385 (14%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 147 PRKREATPDLTDIVSVLDR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 198
Query: 426 PVTSTTQKPLAGISVSASLAK-LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + + D+ L SN R +RL V N+P S + + L+ F
Sbjct: 199 ----PRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPESVTGETLLAF 254
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI + ++ A +EF + DA+ AL DG +
Sbjct: 255 FNVQL--NGLNVIQSVDPCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGN 312
Query: 536 -----SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKM 590
+ L+++RPK+++ E E + V DSP+KI + I + +
Sbjct: 313 GAANGAAQGLEVRRPKDYIVPGGAEQEYQEGVL---LNEVPDSPNKICVSNIPHYIPEEP 369
Query: 591 VMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 648
V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+
Sbjct: 370 VTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLKVVR 429
Query: 649 AVL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSE 698
A + + +D N A+ + K T VL+L N+ PE +
Sbjct: 430 ASIGMTQAAGLDMGVN---------AMSMFAKTTSQDLETSRVLQLLNMVTPEEL--MDP 478
Query: 699 LEVEEVLEDVRLECARFGSVKSVNV 723
+ +E+ +DVR EC+++G+V + V
Sbjct: 479 EDYDEICDDVRDECSKYGTVVELKV 503
>gi|452979953|gb|EME79715.1| hypothetical protein MYCFIDRAFT_81194 [Pseudocercospora fijiensis
CIRAD86]
Length = 552
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 168/360 (46%), Gaps = 46/360 (12%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + A + +
Sbjct: 158 KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA-----PRQQPMDPQKLQAFMNQ 207
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
S L S+ R +RL + N+P +A++ +++F N L +G+ G PC+
Sbjct: 208 PGNQASSTALKPSSARQSKRLLIHNIPAAATDDNIVDFFN--LQLNGLNVTRGQDPCVSA 265
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF-------------SGSILKIKRPKEFVEVA 552
I +E G A VEF T EDA+ A+ DG + + L+IKRPK+++
Sbjct: 266 QISKENGYALVEFKTPEDATNAMAFDGINMMPDAMDTNGDSNGTAKGLQIKRPKDYIVPN 325
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH 612
+ ++ + + +SG+V D+ +KI I + L + E++ +FG L+ + +
Sbjct: 326 VTDETENPSGI--LSGVVPDTQNKISITNLPTFLGEDQIQELLNSFGELRNFVLVKDTST 383
Query: 613 EEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH 670
EE AF EY D VT A+ LNG+++G + A + I G + +
Sbjct: 384 EESRGIAFCEYKDPSVTKTAVESLNGMELGDAAMKVKLASI--GIQQVPGE-----MSVN 436
Query: 671 ALPLL----KKPTE---VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
A+ L+ + TE VL L N+ PE + E +E+L DV+ E +++G + V +
Sbjct: 437 AMSLMAGTQAEGTEKGRVLCLMNMITPEEL--MDADEADEILVDVKEEVSKYGPLLDVKM 494
>gi|281207514|gb|EFA81697.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 682
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 6/190 (3%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P + +E ++EF N ++++ + G P + C I K AF+EF ++E+
Sbjct: 299 RRLYVGNIPPNVTEAQIVEFFNAAIIAAALTTKPGQ-PVLLCQITTGKSFAFIEFRSSEE 357
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A+ + DG S SG LKI+RPK++ SG E + VS V DS +KIF+GG+
Sbjct: 358 ATLGMGLDGISLSGYSLKIRRPKDY---QSGSNEPMPTGLSIVSTNVPDSENKIFLGGLP 414
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
TL+ + + ++ A G LKA++ + + AF E++D T KA A LNG K G
Sbjct: 415 PTLNEEQIKSMLSAIGRLKAFNLVKDTKTGISKGFAFCEFLDPENTDKACAELNGTKFGD 474
Query: 642 QVLTAVQAVL 651
+ L +A L
Sbjct: 475 KSLLVQKASL 484
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 151/300 (50%), Gaps = 25/300 (8%)
Query: 442 ASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLS----SGVQHVH 497
A LA L + +VQ T R RR+ V P + +E L F+ N L++ SG
Sbjct: 199 ARLAALQAAGINVQAT---RHARRVYVGGFPDNTNEPELASFIANALVAIGGASGAYDPD 255
Query: 498 GSLPCIGCV-IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-------V 549
+ C+ V I R+K AFVEF T E+AS A+ DG +GS L+++RP ++ +
Sbjct: 256 NGMTCVLSVYINRDKLFAFVEFRTVEEASNAMALDGVVMAGSQLRVRRPNDYQPQQAALI 315
Query: 550 EVASGEAEKSVASVDSVSGI-VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
+ ++A+V + G+ + S K+++G + L+ V+E++ +FG ++A++ V
Sbjct: 316 GPTTPADSLNLAAVGLIPGVNGQSSGRKLYVGNLPPYLTELQVLELLQSFGAVQAFNLVV 375
Query: 609 NEDHE--EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN----SGNP 662
++D + F EY D A+ GL G+++G +VL +A DG + SG+
Sbjct: 376 DKDTGTLKGYGFFEYADAAADEAAMEGLTGMRLGDKVLNVKRAAYDGGVGQGVGQASGSA 435
Query: 663 PFHGIPKHALPL-LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
G +LP + +E ++L N+ E + + E E+LED + ECA FG + V
Sbjct: 436 QAPGFAPGSLPANGESASECVRLTNMVTREELTDPT--EAREILEDTQEECAGFGELTRV 493
>gi|357470349|ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 634
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 43/295 (14%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ F + + + G + I +K AFVE
Sbjct: 294 QATRHARRVYVGGLPPTANEQSVAIFFSQVMANIGGNTAGPGDAVVNVYINHDKKFAFVE 353
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + G ++ ++ +V G
Sbjct: 354 MRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLTPGSA 413
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + + E++ FGPL+ F++ +D E + AF Y D
Sbjct: 414 GGLEGPDRIFVGGLPYYFTETQIRELLETFGPLRG--FDLVKDRETGNSKGYAFCVYADL 471
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN----PPFHGIPKHALP------L 674
VT A A LNG+K+G + LT +A N G P I HA L
Sbjct: 472 AVTDIACAALNGIKMGDKTLTVRRA--------NQGTTQPKPEQESILMHAQQQIALQKL 523
Query: 675 LKKP----TEVLKLKNVFNPEGFSSLSELE-VEEVLEDVRLECARFGSVKSVNVV 724
+ +P T+V+ L N PE L E E EE+++D+R EC++FGS+ VNVV
Sbjct: 524 IFQPALVATKVVCLTNAVAPE---ELKEDEDFEEIIDDMRQECSKFGSL--VNVV 573
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 164/362 (45%), Gaps = 55/362 (15%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP + + + Q + S P + PLA + L +
Sbjct: 161 FDMAPPTSALLSGATDVAGQVPGTTN----PSIPGMFSNMFPLA----AGQFGALPIMPV 212
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP +A+E+++ F ++ + + G + I EK
Sbjct: 213 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKK 272
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDS 565
AFVE + E+AS A+ DG F G +K++RP ++ + G ++ S +A+V
Sbjct: 273 FAFVEMRSVEEASNAMALDGVVFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGL 332
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + + E++ +FG L+ F++ +D E + AF
Sbjct: 333 TPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG--FDLVKDRETGNSKGYAFC 390
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG----NPPFHGIPKHALP-- 673
Y D VT A A LNG+K+G + LT +A N G NP + HA
Sbjct: 391 VYQDVSVTDIACAALNGIKMGDKTLTVRRA--------NQGTTQPNPEQESVLLHAQQQI 442
Query: 674 ----LLKKP----TEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSV 721
+ +P T+VL L V S+ EL + +++LED+R+EC +FG++ +V
Sbjct: 443 ALQRFMLQPGALATKVLCLTEVV------SVDELKDDDDYQDILEDMRIECGKFGALLNV 496
Query: 722 NV 723
+
Sbjct: 497 VI 498
>gi|296811258|ref|XP_002845967.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843355|gb|EEQ33017.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 557
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 72/391 (18%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 136 TPPPKKREPTPDLTDVVPILERKRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA 190
Query: 425 ------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSAS 476
DP + + P A S + +L K ++R +RL N+P S +
Sbjct: 191 PRQQAVDPSRLQAFINPPTASGSSNNTLLK----------PSNSRQSKRLFAHNIPPSVT 240
Query: 477 EKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF- 535
E L +F N L +G+ + G PC I ++ A +EF TA DA+ AL DG +
Sbjct: 241 EDTLQQFFN--LQLNGLNVISGVDPCQSVQISKDGKFALLEFNTAADATVALAFDGITME 298
Query: 536 ------------SGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
+G + L I RPK+++ E E V +S V DSP+KI +
Sbjct: 299 EHEANQESNGESNGQVKGLSIVRPKDYIVPLPTEEEPRQEGV--LSSNVPDSPNKICVSN 356
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
I + V ++ +FG LK++ +V D AF EY+D T A+ GLNG+++
Sbjct: 357 IPPFIQEDQVTMLLISFGELKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMEL 416
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEG 692
G + L +A + G++ + G+ +A+ + K T VL+L N+ +
Sbjct: 417 GDRRLKVNRASI-GTVQAAGLD---MGV--NAMSMFAKTTSQDLETGRVLQLLNMVTADE 470
Query: 693 FSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + EE+ EDV+ EC+++G V+ + +
Sbjct: 471 L--IDNDDYEEICEDVQDECSKYGVVEELKI 499
>gi|134075845|emb|CAL00224.1| unnamed protein product [Aspergillus niger]
Length = 598
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 176/389 (45%), Gaps = 64/389 (16%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 164 PRKREATPDLTDIVSVLDR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 215
Query: 426 PVTSTTQKPLAGISVSASLAK-LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + + D+ L SN R +RL V N+P S + + L+ F
Sbjct: 216 ----PRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPESVTGETLLAF 271
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI + ++ A +EF + DA+ AL DG +
Sbjct: 272 FNVQL--NGLNVIQSVDPCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGN 329
Query: 536 -----SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI----VKDSPHKIFIGGISRTL 586
+ L+++RPK+++ E E G+ V DSP+KI + I +
Sbjct: 330 GAANGAAQGLEVRRPKDYIVPGGAEQEYQ-------EGVLLNEVPDSPNKICVSNIPHYI 382
Query: 587 SSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+ V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L
Sbjct: 383 PEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHL 442
Query: 645 TAVQAVL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFS 694
V+A + + +D N A+ + K T VL+L N+ PE
Sbjct: 443 KVVRASIGMTQAAGLDMGVN---------AMSMFAKTTSQDLETSRVLQLLNMVTPEEL- 492
Query: 695 SLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + +E+ +DVR EC+++G+V + V
Sbjct: 493 -MDPEDYDEICDDVRDECSKYGTVVELKV 520
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RR+ V N+P S+ LMEF N +L++ + G P + C I K AF+EF + E+
Sbjct: 268 RRIYVGNIPPGISDSELMEFFNAAVLAANLNTKPGP-PVVFCQINAPKCFAFIEFRSPEE 326
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A+ A+ DG S LKI+RPK++ + + V V DS +KI++GG+
Sbjct: 327 ATNAMRFDGISLKNFTLKIRRPKDYQSTSDNTGGNASLLPSIVPTNVPDSENKIYVGGLP 386
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
LS + V ++ A+G LKA++ + N + AF EY D VT A + LNG+ +
Sbjct: 387 SNLSEEQVKSLLSAYGKLKAFNLVKDTNTGVSKGFAFCEYQDSEVTDVACSKLNGIPLAD 446
Query: 642 QVLTAVQA 649
+ L +A
Sbjct: 447 KTLVVQRA 454
>gi|315044445|ref|XP_003171598.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|311343941|gb|EFR03144.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
Length = 565
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 72/391 (18%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 144 TPPPKKREPTPDLTDVVPILERKRRLTQWDIKPPGYENV-----TAEQAKVSGMFPLPGA 198
Query: 425 ------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSAS 476
DP + + P A S + +L K ++R +RL N+P S +
Sbjct: 199 PRQQAVDPSRLQAFMNPPAASGSNTNTLLK----------PSNSRQSKRLFTHNIPPSVT 248
Query: 477 EKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF- 535
E L +F N L +G+ + G PC I ++ A +EF TA DA+ AL DG +
Sbjct: 249 EDTLQQFFN--LQLNGLNVISGVDPCQSVQISKDGKFALLEFNTAADATVALAFDGITME 306
Query: 536 ------------SGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
+G + L I RPK+++ + E V VS V DSP+KI +
Sbjct: 307 EHEANRENNGESNGEVKGLSIIRPKDYIVPLPTDEEPHQEGV--VSSNVPDSPNKICVSN 364
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
I + V ++ +FG LK++ +V D AF EY+D T A+ GLNG+++
Sbjct: 365 IPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMEL 424
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEG 692
G + L +A + G++ + G+ +A+ + K T VL+L N+ +
Sbjct: 425 GDRRLKVNRASI-GTVQAAGLD---MGV--NAMSMFAKTTSQDLETGRVLQLLNMVTADE 478
Query: 693 FSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + EE+ EDV+ EC+++G V+ + +
Sbjct: 479 L--IDNEDYEEICEDVQEECSKYGVVEELKI 507
>gi|453082700|gb|EMF10747.1| hypothetical protein SEPMUDRAFT_48483 [Mycosphaerella populorum
SO2202]
Length = 432
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 172/363 (47%), Gaps = 52/363 (14%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P +V T+ QA S + + Q+P+ + A + +
Sbjct: 38 KRRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGA-----PRQQPMDPAKLQAFMNQ 87
Query: 447 LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
S L S+ R +R+ V NLP SA+++++++F N L +G+ G PCI
Sbjct: 88 PGNQASSSALKPSSARQSKRVMVHNLPPSATDESMVDFFN--LQLNGLNITRGVDPCISA 145
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSF-------SGSI------LKIKRPKEFV--- 549
++K A VEF T EDA+ A+ DG + SG+ L+IKRP++++
Sbjct: 146 QCSKDKTYALVEFKTPEDATNAMALDGITMDHDAMDTSGASNGAPKGLQIKRPRDYIVPN 205
Query: 550 EVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
+ E E + +S V D+ +KI I + L+ + + E++ +FG LK++ N
Sbjct: 206 VIDETENESGL-----LSNTVPDTQNKISITNLPSFLAEEQIQELLMSFGELKSFVLVRN 260
Query: 610 EDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGI 667
+ E AF EY D VT A+ LNG+++ + A + I S +
Sbjct: 261 QSSGESRGIAFCEYKDPSVTKVAVDSLNGMELADTAMRVKLASI--GIQQVSSE-----M 313
Query: 668 PKHALPLL--KKPTE-----VLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKS 720
+A+ L+ K T+ VL L N+ PE + + +E+LEDV+ ECA++G +
Sbjct: 314 SVNAMSLMAGAKSTDADNGRVLALMNMITPEEL--MDPDDADEILEDVKEECAKYGPLLE 371
Query: 721 VNV 723
V +
Sbjct: 372 VKM 374
>gi|326475623|gb|EGD99632.1| splicing factor u2af large subunit [Trichophyton tonsurans CBS
112818]
gi|326483752|gb|EGE07762.1| splicing factor U2AF subunit [Trichophyton equinum CBS 127.97]
Length = 565
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 72/391 (18%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 135 TPPPKKREPTPDLTDVVPILERKRRLTQWDIKPPGYENV-----TAEQAKVSGMFPLPGA 189
Query: 425 ------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSAS 476
DP + + P A S + +L K ++R +RL N+P S +
Sbjct: 190 PRQQAVDPSRLQAFMNPPAASGSSNNTLLK----------PSNSRQSKRLFAHNIPPSVT 239
Query: 477 EKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF- 535
E L +F N L +G+ + G PC I ++ A +EF TA DA+ AL DG +
Sbjct: 240 EDTLQQFFN--LQLNGLNVISGVDPCQSVQISKDGKFALLEFNTAADATVALAFDGITME 297
Query: 536 ------------SGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
+G + L I RPK+++ + E V VS V DSP+KI +
Sbjct: 298 EHEANRESNGESNGEVKGLTIVRPKDYIVPLPTDEEPRQEGV--VSSNVPDSPNKICVSN 355
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
I + V ++ +FG LK++ +V D AF EY+D T A+ GLNG+++
Sbjct: 356 IPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMEL 415
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEG 692
G + L +A + G++ + G+ +A+ + K T VL+L N+ +
Sbjct: 416 GDRRLKVNRASI-GTVQAAGLD---MGV--NAMSMFAKTTSQDLETGRVLQLLNMVTADE 469
Query: 693 FSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + EE+ EDV+ EC+++G V+ + +
Sbjct: 470 L--IDNEDYEEICEDVQEECSKYGVVEELKI 498
>gi|350635494|gb|EHA23855.1| hypothetical protein ASPNIDRAFT_209800 [Aspergillus niger ATCC
1015]
Length = 566
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 176/389 (45%), Gaps = 64/389 (16%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 132 PRKREATPDLTDIVSVLDR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 183
Query: 426 PVTSTTQKPLAGISVSASLAK-LNVSMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + + D+ L SN R +RL V N+P S + + L+ F
Sbjct: 184 ----PRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPESVTGETLLAF 239
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI + ++ A +EF + DA+ AL DG +
Sbjct: 240 FNVQL--NGLNVIQSVDPCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGN 297
Query: 536 -----SGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI----VKDSPHKIFIGGISRTL 586
+ L+++RPK+++ E E G+ V DSP+KI + I +
Sbjct: 298 GAANGAAQGLEVRRPKDYIVPGGAEQEYQ-------EGVLLNEVPDSPNKICVSNIPHYI 350
Query: 587 SSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+ V ++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L
Sbjct: 351 PEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHL 410
Query: 645 TAVQAVL---DGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFS 694
V+A + + +D N A+ + K T VL+L N+ PE
Sbjct: 411 KVVRASIGMTQAAGLDMGVN---------AMSMFAKTTSQDLETSRVLQLLNMVTPEEL- 460
Query: 695 SLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + +E+ +DVR EC+++G+V + V
Sbjct: 461 -MDPEDYDEICDDVRDECSKYGTVVELKV 488
>gi|242803779|ref|XP_002484243.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
gi|218717588|gb|EED17009.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
Length = 543
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 61/368 (16%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS------DP--VTSTTQKPLAGI 438
+++ +WD+ P +V T+ QA S + + DP + + +P AG
Sbjct: 148 KRRLTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGAPRQQAVDPSRLQALVNQPAAGT 202
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
+ +++L N +R +RL NLP + +E AL+ F N L +G+ + G
Sbjct: 203 TENSALRPAN-----------SRQAKRLFAHNLPPNVTEAALVSFFN--LQLNGLNVIEG 249
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-----------SGSILKIKRPKE 547
PC+ I ++ A +EF A + + AL DG + L+++RPK+
Sbjct: 250 IDPCVSAQISKDHSFALLEFKGANETTVALALDGITMEEHESAATANGGARGLELRRPKD 309
Query: 548 FVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF- 606
++ V S ++ +S V DSP+K+ I I + + V ++ + G LKA+
Sbjct: 310 YI-VPSVPEDQQPHQESVISNHVPDSPNKLCITNIPLYIPEEPVTMLLKSIGELKAFVLV 368
Query: 607 -EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSI---MDNSGNP 662
+ D AF EYVD T A+ LNG+++G + L A + + +D N
Sbjct: 369 KDSGTDESRGIAFCEYVDAASTAIAVESLNGMELGDKHLKITHASIGATQAAGLDMGVN- 427
Query: 663 PFHGIPKHALPLLKKPT-------EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARF 715
A+ + K T +L+L N+ + ++ + EE+LEDV+ EC+++
Sbjct: 428 --------AMSMFAKTTSADLETSRILQLLNMVTADEL--INNDDYEEILEDVQDECSKY 477
Query: 716 GSVKSVNV 723
G V V +
Sbjct: 478 GQVLDVKI 485
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 167/370 (45%), Gaps = 46/370 (12%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAH---EMVSSDPVTSTTQKPLAGISVSASL 444
K+ + +D+AP + +P+ + AA+++A ++ + P + + S
Sbjct: 124 KRMSGFDMAPPSSAILPNAAAAAAAAAAASAAASGQIAGTTPPIPGMFPNMFPLGTSQQF 183
Query: 445 AKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
L V Q+ R RR+ V LP +A+E+++ F + + + G +
Sbjct: 184 GALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVN 243
Query: 505 CVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVA 561
I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ +
Sbjct: 244 VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 303
Query: 562 SVDSVSGIVKDS------PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE-- 613
S G+ S P +IF+GG+ + + E++ +FGPL+ F++ +D E
Sbjct: 304 LNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRG--FDLVKDRETG 361
Query: 614 --EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP-------- 663
+ AF Y D VT A A LNG+K+G + LT +A + N P
Sbjct: 362 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA-------NQGTNQPKPEQENVL 414
Query: 664 FHGIPKHALPLL---------KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECAR 714
H + AL L PT+V+ L V G + E E++LED+R E +
Sbjct: 415 LHAQQQIALQRLMLQPQPQQQPVPTKVVCLTQVVT--GDELKDDDEYEDILEDMRTEAGK 472
Query: 715 FGSVKSVNVV 724
FG + VNVV
Sbjct: 473 FGLL--VNVV 480
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 141/293 (48%), Gaps = 39/293 (13%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+++ + N + + G + I +K AFVE
Sbjct: 201 QATRHARRVYVGGLPPSANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 260
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V G
Sbjct: 261 MRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSSNLNLAAVGLTPGSA 320
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 321 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 378
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN----PPFHGI----------PKH 670
VT A A LNG+K+G + LT +A N G+ P I K
Sbjct: 379 NVTDIACAALNGIKMGDKTLTVRRA--------NQGSAQPRPEQENILLQAQQQVQLQKL 430
Query: 671 ALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 431 VYQVGALPTKVVCLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGNLVKVVI 481
>gi|115400045|ref|XP_001215611.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
gi|114191277|gb|EAU32977.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
Length = 413
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 48/381 (12%)
Query: 367 PRKRR-TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
PRKR T S ++R +++ +WD+ P +V T+ QA S + +
Sbjct: 4 PRKREATPDLTDVVSVLHR--KRRLTQWDIKPPGYENV-----TAEQAKLSGMFPLPGA- 55
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQS-NRPMRRLCVENLPLSASEKALMEF 483
Q+P+ + A + + S D+ L S +R +RL V N+P + + +AL+ F
Sbjct: 56 ----PRQQPMDPSRLQAFMNQSTTGSADAASLKPSHSRQAKRLFVYNIPPNVTGEALLSF 111
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFS------- 536
N L +G+ V PCI + + A +EF + +A+ AL DG +
Sbjct: 112 FN--LQLNGLNVVQSVDPCISAQVSDDHSFALLEFKSPNEATVALAFDGITMDEHASMDG 169
Query: 537 ---GSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMV 591
G + L+++RPK+++ V +G A++ + V DSP+KI + I + + + V
Sbjct: 170 AGKGEVKGLEVRRPKDYI-VPNGSADQEYQE-GVLLNEVPDSPNKICVSNIPQYIQEEAV 227
Query: 592 MEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
+ ++ +FG LK++ + EE AF EY D T A+ GLNG+++G + L V+A
Sbjct: 228 IMLLKSFGELKSFVLVKDASTEESRGIAFCEYADPTATSIAVEGLNGMEIGDRPLKVVRA 287
Query: 650 VLDGSIMDNSGNPPFHGIPKHALPLLKKPTE-------VLKLKNVFNPEGFSSLSELEVE 702
SI G+ +A+ + K T VL+L N+ E + + E
Sbjct: 288 ----SIGMTQAAGLDMGV--NAMSMFAKTTSQDLETSRVLQLLNMVTAEEL--IDNDDYE 339
Query: 703 EVLEDVRLECARFGSVKSVNV 723
E+ EDVR EC+++G V + V
Sbjct: 340 EICEDVREECSKYGQVLELKV 360
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 34/354 (9%)
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+D+AP PS + T A ++ A ++ + P + + L V
Sbjct: 190 FDMAPP-----PSAMLTGAAAVAAAAGQIPGTAPAIPGMFPNMFPLGTGQQFGTLPVMPV 244
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKG 512
Q+ R RR+ V LP +A+E+++ F ++ + + G + I EK
Sbjct: 245 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKK 304
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDS 565
AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ ++ +V
Sbjct: 305 FAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGL 364
Query: 566 VSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFI 619
G + P +IF+GG+ + + E++ +FGPL+ F++ +D E + AF
Sbjct: 365 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG--FDLVKDRETGNSKGYAFC 422
Query: 620 EYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHA-------- 671
Y D VT A A LNG+K+G + LT V+ G+ N P + HA
Sbjct: 423 VYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGA---NQPKPEQETVLLHAQQQIALQR 478
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVK 725
L L PT+V+ L V + + E E++LED+R E +F + K
Sbjct: 479 LMLQPVPTKVVCLTQVVTADELK--DDDEYEDILEDMRTEGGKFAFCSATFCYK 530
>gi|164657478|ref|XP_001729865.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
gi|159103759|gb|EDP42651.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
Length = 473
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 44/299 (14%)
Query: 435 LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLN-----NFLL 489
+A + + S A N SM RRL V + + + L F+N L
Sbjct: 134 MAELEATTSAAAFNASM--------YLETRRLHVSPVSSVKTSQQLRIFINAKMNERLLC 185
Query: 490 SSGVQHVHGSL-PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
SSG SL PC + ++G A++EF ++AS AL DG +F G L I+RPK +
Sbjct: 186 SSG------SLEPCYAVDMHLDEGYAYLEFRNPDEASNALLLDGVAFLGHRLHIERPKGY 239
Query: 549 VEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
V + +V + ++ V D P+K++IG + L+ + VME++ AFG ++ HF++
Sbjct: 240 V------GQDAVPAPGAIETSVPDGPNKLYIGNVPVFLNEQQVMELLKAFGDVR--HFDL 291
Query: 609 NEDHEEP----CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
D E AF E+ + VT A GL+GL+VG Q L + ++ S N
Sbjct: 292 IRDPETQRSRGMAFCEFHEDAVTDLACEGLDGLEVGEQRLMVRR-------VNASTNTHT 344
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
H + PT + + N+ + L + E +++ EDV EC+R G+V SV +
Sbjct: 345 H---EDTQETSDTPTRAMLMLNMVTTDEL--LDDTEYQDIKEDVHSECSRHGTVTSVYI 398
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 45/311 (14%)
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSL 500
+ L L V Q+ R RR+ V LP +A+E+++ F ++ + + G
Sbjct: 214 TGQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAGPGD 273
Query: 501 PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAE 557
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++
Sbjct: 274 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ 333
Query: 558 K----SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED 611
++A+V G + P +IF+GG+ + + E++ +FGPL+ F++ +D
Sbjct: 334 PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEGQIRELLESFGPLRG--FDLVKD 391
Query: 612 HE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLT---AVQAVLDG-----SIMDNS 659
E + AF Y D VT A A LNG+K+G + LT A Q V S++
Sbjct: 392 RETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGVTQPKPEQESVL--- 448
Query: 660 GNPPFHGIPKHALP-LLKKP----TEVLKLKNVFNPEGFSSLSELEVEE----VLEDVRL 710
H + AL L+ +P T+VL L V S EL +E +LED+RL
Sbjct: 449 ----LHAQQQIALQKLMLQPGTLATKVLCLTQVV------SADELRDDEDYADILEDMRL 498
Query: 711 ECARFGSVKSV 721
EC +F V V
Sbjct: 499 ECGKFTLVNLV 509
>gi|212539736|ref|XP_002150023.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067322|gb|EEA21414.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 551
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 165/368 (44%), Gaps = 61/368 (16%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS------DP--VTSTTQKPLAGI 438
+++ +WD+ P +V T+ QA S + + DP + + +P A
Sbjct: 156 KRRMTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGAPRQQAVDPSRLQALVNQPSATT 210
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
+ S++L N +R +RL NLP + ++ AL+ F N L +G+ + G
Sbjct: 211 TESSTLRPAN-----------SRQAKRLFAYNLPPNVTDAALISFFN--LQLNGLNVIEG 257
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-----------SGSILKIKRPKE 547
PC+ I ++ A +EF +A+ AL DG S L+++RPK+
Sbjct: 258 IDPCVSSQISKDHAFALLEFKGPNEATVALALDGISMEEHEAAATTNGGARGLELRRPKD 317
Query: 548 FVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF- 606
++ +S E ++ +S V DSP+K+ + I + + V ++ + G L+A+
Sbjct: 318 YIVPSSPEDQQPYQE-GVISNQVPDSPNKLCVTNIPLYIPEEPVTMLLKSIGELRAFVLV 376
Query: 607 -EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA---VLDGSIMDNSGNP 662
+ D AF EYVD T A+ LNG+++G + L A V + +D N
Sbjct: 377 KDSGTDESRGIAFCEYVDATATAIAVESLNGMELGDKHLKITHASIGVTQAAGLDMGVN- 435
Query: 663 PFHGIPKHALPLLKK-------PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARF 715
A+ + K T VL+L N+ + ++ + EE+LEDV+ EC+++
Sbjct: 436 --------AMSMFAKTTSADLETTRVLQLLNMVTADEL--INNEDYEEILEDVQDECSKY 485
Query: 716 GSVKSVNV 723
G V + +
Sbjct: 486 GQVLDLKI 493
>gi|212539738|ref|XP_002150024.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067323|gb|EEA21415.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 556
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 165/368 (44%), Gaps = 61/368 (16%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS------DP--VTSTTQKPLAGI 438
+++ +WD+ P +V T+ QA S + + DP + + +P A
Sbjct: 156 KRRMTQWDIKPPGYDNV-----TAEQAKLSGMFPLPGAPRQQAVDPSRLQALVNQPSATT 210
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
+ S++L N +R +RL NLP + ++ AL+ F N L +G+ + G
Sbjct: 211 TESSTLRPAN-----------SRQAKRLFAYNLPPNVTDAALISFFN--LQLNGLNVIEG 257
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-----------SGSILKIKRPKE 547
PC+ I ++ A +EF +A+ AL DG S L+++RPK+
Sbjct: 258 IDPCVSSQISKDHAFALLEFKGPNEATVALALDGISMEEHEAAATTNGGARGLELRRPKD 317
Query: 548 FVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF- 606
++ +S E ++ +S V DSP+K+ + I + + V ++ + G L+A+
Sbjct: 318 YIVPSSPEDQQPYQE-GVISNQVPDSPNKLCVTNIPLYIPEEPVTMLLKSIGELRAFVLV 376
Query: 607 -EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA---VLDGSIMDNSGNP 662
+ D AF EYVD T A+ LNG+++G + L A V + +D N
Sbjct: 377 KDSGTDESRGIAFCEYVDATATAIAVESLNGMELGDKHLKITHASIGVTQAAGLDMGVN- 435
Query: 663 PFHGIPKHALPLLKK-------PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARF 715
A+ + K T VL+L N+ + ++ + EE+LEDV+ EC+++
Sbjct: 436 --------AMSMFAKTTSADLETTRVLQLLNMVTADEL--INNEDYEEILEDVQDECSKY 485
Query: 716 GSVKSVNV 723
G V + +
Sbjct: 486 GQVLDLKI 493
>gi|327297188|ref|XP_003233288.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
gi|326464594|gb|EGD90047.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
Length = 563
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 174/391 (44%), Gaps = 72/391 (18%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 135 TPPPKKREPTPDLTDVVPILERKRRLTQWDIKPPGYENV-----TAEQAKVSGMFPLPGA 189
Query: 425 ------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSAS 476
DP + + P A S + +L K ++R +RL N+P + +
Sbjct: 190 PRQQAVDPSRLQAFMNPPAASGSGNNTLLK----------PSNSRQSKRLFAHNIPPNVT 239
Query: 477 EKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF- 535
E L +F N L +G+ + G PC I ++ A +EF TA DA+ AL DG +
Sbjct: 240 EDTLQQFFN--LQLNGLNVISGVDPCQSVQISKDGKFALLEFNTAADATVALAFDGITME 297
Query: 536 ------------SGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
+G++ L I RPK+++ + E V VS V DSP+KI +
Sbjct: 298 EHEANRESNGESNGNVKGLTIVRPKDYIVPLPTDEEPRQEGV--VSSNVPDSPNKICVSN 355
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
I + V ++ +FG LK++ +V D AF EY+D T A+ GLNG+++
Sbjct: 356 IPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDESRGIAFCEYLDSASTGIAVEGLNGMEL 415
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEG 692
G + L +A + G++ + G+ +A+ + K T VL+L N+ +
Sbjct: 416 GDRRLKVNRASI-GTVQAAGLD---MGV--NAMSMFAKTTSQDLETGRVLQLLNMVTADE 469
Query: 693 FSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + EE+ EDV+ EC+++G V+ + +
Sbjct: 470 L--IDNEDYEEICEDVQEECSKYGVVEELKI 498
>gi|224030681|gb|ACN34416.1| unknown [Zea mays]
Length = 425
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPM 463
V +QA + A +V++ + P+ G+ V +L L Q+ R
Sbjct: 76 VSGFDQAPTQQALPIVAAGVIPGQLPGVTAPIPGVGVLPNLYNLAAGQPQAMTQQATRHA 135
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RR+ V LP +A+E+ + F N + + G + I +K AFVE + E+
Sbjct: 136 RRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE 195
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGIVKDS------P 574
AS A+ DG F G+ +KI+RP ++ + A G ++ + S G+ S P
Sbjct: 196 ASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGLTPGSAGGLEGP 255
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKA 630
+IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D VT A
Sbjct: 256 DRIFVGGLQYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDLNVTDIA 313
Query: 631 IAGLNGLKVGGQVLTAVQA 649
A LNG+K+G + LT +A
Sbjct: 314 CAALNGIKMGDKTLTVRRA 332
>gi|303283510|ref|XP_003061046.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457397|gb|EEH54696.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 378
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 64/313 (20%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG-VQHVHGSLPCIGCV----IQREK 511
Q+ R RR+ V L + L +F +L++G + V G GCV I REK
Sbjct: 18 VQATRHARRVYVGALTADVDDAHLTQFFEEIMLATGATKRVDG-----GCVVSTYINREK 72
Query: 512 GQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-VEVAS--GEAEKSVASVDSVSG 568
AF+EF T E+AS AL DG + G L+++RP ++ + AS G + + S G
Sbjct: 73 LFAFIEFQTVEEASNALGFDGVVYGGQQLRLRRPNDYNIAQASLLGPQQPNPNLNYSAIG 132
Query: 569 I------------VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EE 614
I SP+K+F+GG+ ++ V E+VC+FG +KA++ ++D +
Sbjct: 133 INHTPTPMVASTENSTSPYKLFVGGLPNYITENQVKELVCSFGEIKAFNLVFDKDTGLSK 192
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHA--- 671
AF E++D V+ AI GL+G+++G +++ A +GNPP G A
Sbjct: 193 GYAFWEFLDPSVSEAAIKGLDGMRLGEKLINVKFA---------NGNPPPIGGYNAAGED 243
Query: 672 ----------------LPLLKKP-------TEVLKLKNVFNPEGFSSLSELEVEEVLEDV 708
+PL T ++LK + + E + + E E+LED
Sbjct: 244 GTSTVAAQQQLGYVANVPLATATALTGGVETTCVRLKGMVSREELADPT--EAAEILEDT 301
Query: 709 RLECARFGSVKSV 721
EC FGS+ V
Sbjct: 302 EEECKGFGSLVKV 314
>gi|303274813|ref|XP_003056721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461073|gb|EEH58366.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 709
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 23/249 (9%)
Query: 492 GVQHVHGSLPCIGCVIQR----EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKE 547
G + +H L V+++ +KG +FVE EDA A L DG G++LKI+RPK+
Sbjct: 329 GTEKLHPKLDAPTGVVEKVFISDKGYSFVEGTAVEDACALLALDGIVVRGNLLKIRRPKD 388
Query: 548 FVE-----VASGEAEKSVASV--DSVSGIVKDSPHKIFIGGIS-RTLSSKMVMEIVCAFG 599
+V V G + + + V D+ KIF+G + R L + EI+ +FG
Sbjct: 389 YVASENPLVVDGTMKDVMKRTFEKIIRPSVPDTNTKIFLGNLGDRELDVLELKEIIASFG 448
Query: 600 PLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD----G 653
++A E + + A+ EY+D V P A++GL G+ V G+ L A A D G
Sbjct: 449 RVRAMRAETDAHGRIKRGRAWFEYLDPTVAPHAVSGLTGVMVNGRRLVAAFATPDAPDVG 508
Query: 654 SIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECA 713
+ + G + +P A PLL+ VL +NV + + ++ +EDV+LEC
Sbjct: 509 DVREEDGACAYE-VPAAAEPLLRPEQRVLAFENVLA----AGMDAAAMKAAIEDVKLECE 563
Query: 714 RFGSVKSVN 722
G+V S +
Sbjct: 564 SLGNVLSTH 572
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 922 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
G VFVE+ R E + +AAH HRRLFD R V +EY P+ Y+ F+K
Sbjct: 635 GEVFVEFARVETATVAAHRFHRRLFDGRSVKIEYFPIAEYQRAFAK 680
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 23/299 (7%)
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
L L V Q+ R RR+ V LP +A+E+++ F + + + G +
Sbjct: 235 LGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVV 294
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK-- 558
I EK AFVE + E+AS A+ DG G +K++RP ++ + G ++
Sbjct: 295 NVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNP 354
Query: 559 --SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--H 612
++A+V SG + P +IF+GG+ + + E++ +FGPL+ ++ + + +
Sbjct: 355 NLNLAAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGN 414
Query: 613 EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPP--FHGIPKH 670
+ AF Y D VT A A LNG+K+G + LT V+ + G I H +
Sbjct: 415 SKGYAFCVYQDPSVTDIACAALNGIKMGDKTLT-VRRAIQGVIQPKPEQEEVLLHAQQQI 473
Query: 671 ALPLLK-----KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
AL L PT+++ L V + + E +++ED+R E +FG++ VNVV
Sbjct: 474 ALQRLMLQPGGTPTKIVCLTQVVTADDLR--DDEEYADIMEDMRQEGGKFGNL--VNVV 528
>gi|169602913|ref|XP_001794878.1| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
gi|160706286|gb|EAT88221.2| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
Length = 594
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 23/263 (8%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
E++ +WD+ P ++ T+ QA S + + LA ++
Sbjct: 206 ERRMTQWDIKPAGYENI-----TAEQAKLSGMFPLPGAPRAAPMDPSKLAAFMSPSAGTA 260
Query: 447 LNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
++ QS +RL V NLP + + L+EF N L +G+ V G PC+
Sbjct: 261 SAAALAPGASKQS----KRLYVHNLPSGTTSEELLEFFN--LQLNGLNVVSGQDPCLSAQ 314
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSG-------SILKIKRPKEFVEVASGEAEKS 559
I K A +EF T EDA+ AL G S S L I+RPK+++ + A+++
Sbjct: 315 IASSKTYAALEFKTPEDATVALAMSGISMRDDGGGPDRSGLSIRRPKDYI---TPSADEN 371
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
D VS +VKDSP+K+ I I + + + E+V G L A+ +++ + A
Sbjct: 372 AYPGDEVSSVVKDSPNKLSIVNIPTFIEEEQIRELVETMGKLNAFVLVKDISSEQHRGIA 431
Query: 618 FIEYVDQLVTPKAIAGLNGLKVG 640
F EY D V I GLN + +G
Sbjct: 432 FCEYADNEVVNAVIEGLNDITLG 454
>gi|414591746|tpg|DAA42317.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 25/266 (9%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLN------VSMDSVQLT 457
V +QA + A +V++ + P+ G+ V +L L +++ +T
Sbjct: 189 VSGFDQAPTQQALPIVAAGVIPGQLPGVTAPIPGVGVLPNLYNLAAGQFNPLAIQPQAMT 248
Query: 458 Q-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
Q + R RR+ V LP +A+E+ + F N + + G + I +K AFV
Sbjct: 249 QQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 308
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGIVKDS 573
E + E+AS A+ DG F G+ +KI+RP ++ + A G ++ + S G+ S
Sbjct: 309 EMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGLTPGS 368
Query: 574 ------PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVD 623
P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 369 AGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQD 426
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 427 LNVTDIACAALNGIKMGDKTLTVRRA 452
>gi|330931856|ref|XP_003303563.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
gi|311320368|gb|EFQ88342.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
Length = 578
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 22/273 (8%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
++ +WD+ P ++ T+ QA S + + LA ++
Sbjct: 190 RRMTQWDIKPAGYENI-----TAEQAKLSGMFPLPGAPRAAPMDPSKLAAFISPSAGTAT 244
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
++ + QS +RL V NLP + + +MEF NN L +G+ V G+ PC+ I
Sbjct: 245 AAALATSAAKQS----KRLYVHNLPSGCTSQEIMEFFNNQL--NGLNVVSGNDPCLSAHI 298
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSG-------SILKIKRPKEFVEVASGEAEKSV 560
K A +EF EDA+ AL +G S S L I+RPK+++ + E +
Sbjct: 299 ATSKEYAALEFKAPEDATLALAMNGISMRDEGGAPDRSGLSIRRPKDYITPTADE--NAY 356
Query: 561 ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAF 618
D VS +VKDSP+K+ I I + + + E+V G LKA+ + D AF
Sbjct: 357 PPGDEVSSVVKDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTGTDQHRGIAF 416
Query: 619 IEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL 651
EY D + I GLN + +G L +A +
Sbjct: 417 CEYADNEIIDAVIEGLNDIPLGDGNLKVSRATV 449
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
gi|297312833|gb|EFH43256.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 39/313 (12%)
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ S L++ Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 207 LPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAG 266
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASG 554
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G
Sbjct: 267 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLG 326
Query: 555 EAEKS----VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
++ S +A+V G + P +IF+GG+ + V E++ +FG LK F++
Sbjct: 327 PSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGALKG--FDL 384
Query: 609 NEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
+D E + AF Y D VT A A LNG+K+G + LT +A N G
Sbjct: 385 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA--------NQGT--M 434
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRL 710
P+ LL ++ + + P ++ L+++ E E+++ED+R
Sbjct: 435 QPKPEQESVLLHAQQQIAFQRIMLQPGVMATTVVCLTQVVTEDELRDDEEYEDIMEDMRQ 494
Query: 711 ECARFGSVKSVNV 723
E +FG++ +V +
Sbjct: 495 EGGKFGALTNVVI 507
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 25/266 (9%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLN------VSMDSVQLT 457
V +QA + A +V++ + P+ G+ V +L L +++ +T
Sbjct: 189 VSGFDQAPTQQALPIVAAGVIPGQLPGVTAPIPGVGVLPNLYNLAAGQFNPLAIQPQAMT 248
Query: 458 Q-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
Q + R RR+ V LP +A+E+ + F N + + G + I +K AFV
Sbjct: 249 QQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 308
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGIVKDS 573
E + E+AS A+ DG F G+ +KI+RP ++ + A G ++ + S G+ S
Sbjct: 309 EMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGLTPGS 368
Query: 574 ------PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVD 623
P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 369 AGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQD 426
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 427 LNVTDIACAALNGIKMGDKTLTVRRA 452
>gi|302656965|ref|XP_003020217.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
gi|291184026|gb|EFE39599.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
Length = 486
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 173/391 (44%), Gaps = 72/391 (18%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 73 TPPPKKREPTPDLTDVVPILERKRRLTQWDIKPPGYENV-----TAEQAKVSGMFPLPGA 127
Query: 425 ------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSAS 476
DP + + P A S + +L K ++R +RL N+P + +
Sbjct: 128 PRQQAVDPSRLQAFMNPPAASGSSNNTLLK----------PSNSRQSKRLFAHNIPPNVT 177
Query: 477 EKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF- 535
E L +F N L +G+ + G PC I ++ A +EF TA DA+ AL DG +
Sbjct: 178 EDTLQQFFN--LQLNGLNVISGVDPCQSVQISKDGKFALLEFNTAADATVALAFDGITME 235
Query: 536 ------------SGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
+G + L I RPK+++ + E V VS V DSP+KI +
Sbjct: 236 EHEANRESNGESNGDVKGLTIVRPKDYIVPIPTDEEPRQEGV--VSSNVPDSPNKICVSN 293
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
I + V ++ +FG LK++ +V D AF EY+D T A+ GLNG+++
Sbjct: 294 IPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMEL 353
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEG 692
G + L +A + G++ + G+ +A+ + K T VL+L N+ +
Sbjct: 354 GDRRLKVNRASI-GTVQAAGLD---MGV--NAMSMFAKTTSQDLETGRVLQLLNMVTADE 407
Query: 693 FSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + EE+ EDV+ EC+++G V+ + +
Sbjct: 408 L--IDNEDYEEICEDVQEECSKYGVVEELKI 436
>gi|328865493|gb|EGG13879.1| RapGAP/RanGAP domain-containing protein [Dictyostelium fasciculatum]
Length = 3032
Score = 98.2 bits (243), Expect = 2e-17, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI-GCVIQREKGQAF 515
TQ N+ RRL + N+P + ++ L++F N + ++ + + P + C I K AF
Sbjct: 2569 TQQNKQSRRLYIGNIPPNITDNTLIDFFNTAITAANLHLSSKTGPVVLSCQINSAKNFAF 2628
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSV-ASVDSVSGIVKDSP 574
+EF +AE+A+ A+ DG S LKI+RP ++ A+ + S S+ VS V DS
Sbjct: 2629 LEFRSAEEATNAMGLDGISLFTFSLKIRRPTDYQPPANESSMPSAPVSMSIVSTNVPDSE 2688
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIA 632
+KIFIGGI TL+ + + ++ AFG LKA++ + + AF EY + T I
Sbjct: 2689 NKIFIGGIPTTLNEEQIKSMLLAFGRLKAFNLVKDPKTGSSKGYAFCEYYETEETNDCIN 2748
Query: 633 GLNGLKVGGQVL 644
GLNG K G + L
Sbjct: 2749 GLNGTKFGEKSL 2760
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 37/306 (12%)
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
L L V Q+ R RR+ V LP +A+E+++ F + + + G +
Sbjct: 235 LGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVV 294
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK-- 558
I EK AFVE + E+AS A+ DG G +K++RP ++ + G ++
Sbjct: 295 NVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNP 354
Query: 559 --SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--H 612
++ +V SG + P +IF+GG+ + + E++ +FGPL+ ++ + + +
Sbjct: 355 NLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGN 414
Query: 613 EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHAL 672
+ AF Y D VT A A LNG+K+G + LT V+ + G+I P+
Sbjct: 415 SKGYAFCVYQDPSVTDIACAALNGIKMGDKTLT-VRRAIQGAIQPK---------PEQEE 464
Query: 673 PLLKKPTEVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRLECARFGSV 718
LL ++ + +F P G + L+++ E E++ED+R E +FG++
Sbjct: 465 VLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNL 524
Query: 719 KSVNVV 724
VNVV
Sbjct: 525 --VNVV 528
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 25/266 (9%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLN-------VSMDSVQL 456
V +QA +A +V++ + P+ G+ V +L L V
Sbjct: 195 VSGFDQAPPQHALPIVAAGAIPGQLPGITAPIPGVGVLPNLYNLAAGQFNPLVIQPQAMT 254
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
Q+ R RR+ V LP +A+E+ + F N + + G + I +K AFV
Sbjct: 255 QQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 314
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGI 569
E + E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 315 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGS 374
Query: 570 VK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVD 623
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 375 AGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQD 432
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 433 LNVTDIACAALNGIKMGDKTLTVSRA 458
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 25/266 (9%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLN-------VSMDSVQL 456
V +QA +A +V++ + P+ G+ V +L L V
Sbjct: 193 VSGFDQAPPQHALPIVAAGAIPGQLPGITAPIPGVGVLPNLYNLAAGQFNPLVIQPQAMT 252
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
Q+ R RR+ V LP +A+E+ + F N + + G + I +K AFV
Sbjct: 253 QQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 312
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGI 569
E + E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 313 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGS 372
Query: 570 VK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVD 623
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 373 AGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQD 430
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 431 LNVTDIACAALNGIKMGDKTLTVRRA 456
>gi|302511201|ref|XP_003017552.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
gi|291181123|gb|EFE36907.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
Length = 501
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 173/391 (44%), Gaps = 72/391 (18%)
Query: 378 TPSPINRSP-------------EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
TP P R P +++ +WD+ P +V T+ QA S + +
Sbjct: 73 TPPPKKREPTPDLTDVVPILERKRRLTQWDIKPPGYENV-----TAEQAKVSGMFPLPGA 127
Query: 425 ------DP--VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSAS 476
DP + + P A S + +L K ++R +RL N+P + +
Sbjct: 128 PRQQAVDPSRLQAFMNPPAASGSSNNTLLK----------PSNSRQSKRLFAHNIPPNVT 177
Query: 477 EKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF- 535
E L +F N L +G+ + G PC I ++ A +EF TA DA+ AL DG +
Sbjct: 178 EDTLQQFFN--LQLNGLNVISGVDPCQSVQISKDGKFALLEFNTAADATVALAFDGITME 235
Query: 536 ------------SGSI--LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
+G + L I RPK+++ + E V VS V DSP+KI +
Sbjct: 236 EHEANRESNGESNGEVKGLTIVRPKDYIVPIPTDEEPRQEGV--VSSNVPDSPNKICVSN 293
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
I + V ++ +FG LK++ +V D AF EY+D T A+ GLNG+++
Sbjct: 294 IPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDESRGIAFCEYLDPASTGIAVEGLNGMEL 353
Query: 640 GGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPT-------EVLKLKNVFNPEG 692
G + L +A + G++ + G+ +A+ + K T VL+L N+ +
Sbjct: 354 GDRRLKVNRASI-GTVQAAGLD---MGV--NAMSMFAKTTSQDLETGRVLQLLNMVTADE 407
Query: 693 FSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + EE+ EDV+ EC+++G V+ + +
Sbjct: 408 L--IDNEDYEEICEDVQEECSKYGVVEELKI 436
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 35/313 (11%)
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV 493
PLA S L V Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 208 PLA----SGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGG 263
Query: 494 QHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VE 550
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ +
Sbjct: 264 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 323
Query: 551 VASGEAEK----SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
G ++ ++A+V G + P +IF+GG+ + + E++ +FGPL+
Sbjct: 324 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG- 382
Query: 605 HFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS-IMDNS 659
F++ +D E + AF Y D VT A A LNG+K+G + LT +A S
Sbjct: 383 -FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQ 441
Query: 660 GNPPFHGIPKHALP-LLKKP----TEVLKLKNVFNPEGFSSLSELE----VEEVLEDVRL 710
N H + AL L+ +P T+V+ L V N + EL+ E+++ED+R+
Sbjct: 442 ENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNAD------ELQDDEAYEDIVEDMRI 495
Query: 711 ECARFGSVKSVNV 723
E +FG++ +V +
Sbjct: 496 EGGKFGNLVNVAI 508
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 35/313 (11%)
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV 493
PLA S L V Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 205 PLA----SGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGG 260
Query: 494 QHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VE 550
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ +
Sbjct: 261 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 320
Query: 551 VASGEAEK----SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
G ++ ++A+V G + P +IF+GG+ + + E++ +FGPL+
Sbjct: 321 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG- 379
Query: 605 HFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS-IMDNS 659
F++ +D E + AF Y D VT A A LNG+K+G + LT +A S
Sbjct: 380 -FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQ 438
Query: 660 GNPPFHGIPKHALP-LLKKP----TEVLKLKNVFNPEGFSSLSELE----VEEVLEDVRL 710
N H + AL L+ +P T+V+ L V N + EL+ E+++ED+R+
Sbjct: 439 ENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNAD------ELQDDEAYEDIVEDMRI 492
Query: 711 ECARFGSVKSVNV 723
E +FG++ +V +
Sbjct: 493 EGGKFGNLVNVAI 505
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 144/308 (46%), Gaps = 41/308 (13%)
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
L L V Q+ R RR+ V LP +A+E+++ F + + + G +
Sbjct: 214 LGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVV 273
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK-- 558
I EK AFVE + E+AS A+ DG G +K++RP ++ + G ++
Sbjct: 274 NVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNP 333
Query: 559 --SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE- 613
++ +V SG + P +IF+GG+ + + E++ +FGPL+ F + +D E
Sbjct: 334 NLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRG--FNLVKDRET 391
Query: 614 ---EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH 670
+ AF Y D VT A A LNG+K+G + LT V+ + G+I P+
Sbjct: 392 GNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLT-VRRAIQGAIQPK---------PEQ 441
Query: 671 ALPLLKKPTEVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRLECARFG 716
LL ++ + +F P G + L+++ E E++ED+R E +FG
Sbjct: 442 EEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFG 501
Query: 717 SVKSVNVV 724
++ VNVV
Sbjct: 502 NL--VNVV 507
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 159/376 (42%), Gaps = 77/376 (20%)
Query: 378 TPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAG 437
+P P R P ++ +DV P V N ++ + P G
Sbjct: 2 SPGPYERRPRMRATLFDV-------YPEGVDPKNLPSAGAGY-----------GPPPGMG 43
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
S +A A Q+ R RR+ + P A+E+ L F N+ L++ G
Sbjct: 44 FSSAAITA------------QTTRHARRIYLGGCPTMANEQELSSFFNDALVAVG-GTTS 90
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-VEVASGEA 556
P + I EK AFVEF + E+ S AL DG G ++I+RP ++ ++A G
Sbjct: 91 EEAPVVNVYINLEKKFAFVEFRSVEECSNALALDGVMIQGEPVRIRRPNDYNPQIAQGLG 150
Query: 557 ---------------EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPL 601
+ S + + + I+++ P++IFIGG+ L V E++ AFGP+
Sbjct: 151 PSTPNPKLNLQAIGLDPSALARSATTNILQEDPNRIFIGGLPYYLEEPQVRELLEAFGPI 210
Query: 602 KAYHFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA------VL 651
F++ D E + F+ Y D VT A GLNG+++G + LT +A ++
Sbjct: 211 A--RFDLVRDKENGNSKGYGFVVYQDAAVTDIACQGLNGMQMGEKTLTVRRAEQGRTDLI 268
Query: 652 DGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSEL----EVEEVLED 707
G + A+ P+EV+ N+ E EL E E ++ED
Sbjct: 269 GGQVSVPP---------PPAIAPANPPSEVVSFTNMGITE-----EELADDEEFENIMED 314
Query: 708 VRLECARFGSVKSVNV 723
+ EC ++G + SV +
Sbjct: 315 MNEECGKYGKIISVVI 330
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N + + G + I +K AFVE
Sbjct: 205 QATRHARRVYVGGLPPSANEQTVAVYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 264
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V +G
Sbjct: 265 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGST 324
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 325 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 382
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 383 TVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGAL- 441
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 442 -PTKVVCLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGTLVKVII 485
>gi|241166827|ref|XP_002409934.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
gi|215494685|gb|EEC04326.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
Length = 444
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 42/291 (14%)
Query: 460 NRPMRRLCVENLPLSASEKA--------LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREK 511
R RRL V N+P SE + +M++ N + + G G+ P + C I +K
Sbjct: 112 TRQARRLYVGNIPFGCSEASRPLLLREEMMDYFNAQMHACGFSQAPGN-PVLACQINLDK 170
Query: 512 GQAFVEFLTAEDASAALCC------DGCS--FSGSILKIKRPKEFVEVASGEAEKSVASV 563
AF+E + CC D S FSG+ L +G +
Sbjct: 171 NFAFLEVSALDTDLGTPCCPTFVLYDYLSPPFSGNCL-----------GAGNGTPGDTWL 219
Query: 564 DSVSGI----VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
+SG+ V+DSPHKIFIGG+ L+ V E++ +FG L+A++ + + A
Sbjct: 220 GFLSGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYA 279
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFHGIPKHALPL- 674
F EYV+ T +AI GLNG+++G + L +A + S M+ S + P I L L
Sbjct: 280 FCEYVEVTTTDQAIMGLNGMQLGDKKLIVQRASVGAKNSQMNVSRDAPVQ-IQVPGLQLQ 338
Query: 675 --LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ PE E E E++LED+ EC ++G VKS+ +
Sbjct: 339 GGAGPPTEVLCLMNLVCPE--ELKDEEEYEDILEDIHEECNKYGVVKSIEI 387
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 139/280 (49%), Gaps = 18/280 (6%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
R RR+ V LP A+E+++ F + + + G + I +EK AFVE
Sbjct: 162 TRHARRVYVGGLPPMANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINQEKRFAFVEMR 221
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV-- 570
T E+AS A+ DG + G ++++RP ++ + G ++ S + +V G +
Sbjct: 222 TVEEASNAMALDGIVYEGVSVRVRRPSDYNPSMAATLGPSQPSSHLNLTAVGLTPGALGG 281
Query: 571 KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTP 628
D P +IF+GG+ LS + +M+++ +FG L+A+ + D + + F Y D V
Sbjct: 282 ADGPDRIFVGGLPYYLSEEQIMDLLSSFGHLRAFDLVKDRDTGNSKGYGFCVYQDPSVMD 341
Query: 629 KAIAGLNGLKVGGQVLTAVQA---VLDGSIMDNSGNPPFHGIPKHALPLL--KKPTEVLK 683
A A LNGLK+G + LT +A + G + N + AL + + T+V+
Sbjct: 342 IACAALNGLKMGDRTLTVRRASARLRFGQPKPDQSNIIVQAQQQIALQVAAPETATKVIC 401
Query: 684 LKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
L V + ++E +E++ED++ EC ++GS+ +V +
Sbjct: 402 LSQVVSIVDLK--DDVEFDEIVEDMKEECGKYGSLLNVVI 439
>gi|189204129|ref|XP_001938400.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985499|gb|EDU50987.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 572
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
+RL V NLP + + +MEF NN L +G+ V G+ PC+ I K A +EF ED
Sbjct: 251 KRLYVHNLPSGCTSQEIMEFFNNQL--NGLNVVSGNDPCLSAHIATSKEYAALEFKAPED 308
Query: 524 ASAALCCDGCSFSG-------SILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
A+ AL G S S L I+RPK+++ + E + D VS +VKDSP+K
Sbjct: 309 ATLALAMTGISMRDEGGAPDRSGLSIRRPKDYITPTADE--NAYPPGDEVSSVVKDSPNK 366
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 634
+ I I + + + E+V G LKA+ + D AF EY D + I GL
Sbjct: 367 LSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTGTDQHRGIAFCEYADNEIIDAVIEGL 426
Query: 635 NGLKVG 640
N + +G
Sbjct: 427 NDIPLG 432
>gi|303273844|ref|XP_003056274.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226462358|gb|EEH59650.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 564
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSG--VQ--HVHGSLPCIGCVIQREKG 512
TQ+ R RR+ V LP +A+E + F +N L + G VQ G P + + EK
Sbjct: 157 TQATRHARRIYVGGLPATANEASTATFFSNALAAIGGVVQTAAAAGVEPVLNVYMNHEKK 216
Query: 513 QAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVD---SVSGI 569
AFVEF T E+ S A+ DG F G L+++RP ++ + S S D + G+
Sbjct: 217 FAFVEFRTVEETSNAIALDGVVFDGVSLRVRRPNDYNAAIAATLGPSTPSTDLDLAAIGL 276
Query: 570 V------------------------KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH 605
V +D+ +++F+GG+ L+ MV E+V AFGP K H
Sbjct: 277 VPGAGGAAGGAGAGGAAGGQNNLSPEDTANRLFVGGLPYFLTEPMVKELVEAFGPTK--H 334
Query: 606 FEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLT 645
F + D E + F Y D VT A GL+G+K+G + LT
Sbjct: 335 FMLVMDRETGNSKGYGFFVYQDHAVTDVACQGLHGMKMGEKTLT 378
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 25/266 (9%)
Query: 407 VHTSNQAASSNAHEMVSSDPVTST---TQKPLAGISVSASLAKLN-------VSMDSVQL 456
V +QA +A +V++ + P+ G+ V +L L V
Sbjct: 193 VSGFDQAPPQHALPIVAAGAIPGQLPGITAPIPGVGVLPNLYNLAAGQFNPLVIQPQAMT 252
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFV 516
Q+ R RR+ V LP +A+E+ + F N + + G + I +K AFV
Sbjct: 253 QQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKKFAFV 312
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGI 569
E + E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 313 EMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGS 372
Query: 570 VK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVD 623
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 373 AGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQD 430
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 431 LNVTDIACAALNGIKMGDKTLTVRRA 456
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N + + G + I +K AFVE
Sbjct: 199 QATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 258
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGI- 569
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V +G
Sbjct: 259 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGSN 318
Query: 570 -VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 319 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 376
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 377 TVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGAL- 435
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 436 -PTKVVCLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGNLVKVII 479
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N + + G + I +K AFVE
Sbjct: 199 QATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 258
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGI- 569
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V +G
Sbjct: 259 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGSN 318
Query: 570 -VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 319 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 376
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 377 TVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGAL- 435
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 436 -PTKVVCLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGNLVKVII 479
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661290|gb|AEE86690.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 551
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 39/313 (12%)
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ S L++ Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 191 LPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAG 250
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASG 554
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G
Sbjct: 251 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLG 310
Query: 555 EAEKS----VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
++ S +A+V G + P +IF+GG+ + V E++ +FG LK F++
Sbjct: 311 PSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKG--FDL 368
Query: 609 NEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
+D E + AF Y D VT A A LNG+K+G + LT V+ G+++
Sbjct: 369 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGTMLQK------ 421
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRL 710
P+ LL ++ + + P ++ L+++ E +++ED+R
Sbjct: 422 ---PEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQ 478
Query: 711 ECARFGSVKSVNV 723
E +FG++ +V +
Sbjct: 479 EGGKFGALTNVVI 491
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|75318082|sp|O23212.2|U2A2A_ARATH RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|18087531|gb|AAL58899.1|AF462805_1 At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|4006898|emb|CAB16828.1| splicing factor-like protein [Arabidopsis thaliana]
gi|7270617|emb|CAB80335.1| splicing factor-like protein [Arabidopsis thaliana]
gi|23506119|gb|AAN28919.1| At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|24030414|gb|AAN41365.1| putative splicing factor [Arabidopsis thaliana]
gi|332661287|gb|AEE86687.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 573
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 39/313 (12%)
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ S L++ Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 213 LPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAG 272
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASG 554
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G
Sbjct: 273 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLG 332
Query: 555 EAEKS----VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
++ S +A+V G + P +IF+GG+ + V E++ +FG LK F++
Sbjct: 333 PSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKG--FDL 390
Query: 609 NEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
+D E + AF Y D VT A A LNG+K+G + LT V+ G+++
Sbjct: 391 VKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGTMLQK------ 443
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRL 710
P+ LL ++ + + P ++ L+++ E +++ED+R
Sbjct: 444 ---PEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQ 500
Query: 711 ECARFGSVKSVNV 723
E +FG++ +V +
Sbjct: 501 EGGKFGALTNVVI 513
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 54/309 (17%)
Query: 449 VSMDSVQLTQ-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
++M +TQ + R RR+ V LP +A+E+ + + N + + G + I
Sbjct: 225 LAMQPQAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYI 284
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SV 560
+K AFVE + E+AS A+ DG F G+ +K++RP ++ + A G ++ ++
Sbjct: 285 NHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNL 344
Query: 561 ASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----E 614
+V G + P +IF+GG+ + V E++ +FGPL+ F++ +D E +
Sbjct: 345 GAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSK 402
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL 674
AF Y D VT A A LNG+K+G + LT +A S P+ L
Sbjct: 403 GYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAS----------QPRPEQETIL 452
Query: 675 LKK-----------------PTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECA 713
++ PT+V+ L V S EL E E++LED+R E
Sbjct: 453 MQAHQQVQMQRLVLQVGGALPTKVVCLTQVV------SADELRDDEEYEDILEDMREEGR 506
Query: 714 RFGS-VKSV 721
++G+ VK+V
Sbjct: 507 KYGNLVKAV 515
>gi|224003073|ref|XP_002291208.1| U2 snRNP auxillary splicing factor, U2AF subunit [Thalassiosira
pseudonana CCMP1335]
gi|220972984|gb|EED91315.1| U2 snRNP auxillary splicing factor, U2AF subunit, partial
[Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 42/296 (14%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGV---------QHVHGSL---PCIGCVIQREK 511
RRL V N+P S++ L F + + SS + H H + P I I RE+
Sbjct: 5 RRLYVGNIP-DVSDEQLHHFFRDAIRSSIILDNNSEAHSSHKHQYVDNDPIISVYINRER 63
Query: 512 GQAFVEFLTAEDASAALCCDGCSFSG-SILKIKRPKEF-VEVASGEAEKSVASVDS---- 565
AF+EF T E +A + DG G +KIKRP ++ VA ++ +D+
Sbjct: 64 RFAFLEFKTMEITTACMALDGLDVMGRGKVKIKRPNDYNPAVAPMLNASTMPVLDTGKLG 123
Query: 566 -VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE---DHEEPCAFIEY 621
+S V D P+KIF+GG+ L V+E++ AFG +KA++ N+ D + F+EY
Sbjct: 124 IISMTVHDGPNKIFVGGLPYHLVDSQVLELLSAFGAVKAFNLVKNDPMSDTSKGYCFVEY 183
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMD--------------NSGNPPFHGI 667
D VT A GLNG+ +GG Q ++ M + G PP
Sbjct: 184 CDPNVTQIAAMGLNGMDMGGGKQPYQQPIVVKDPMAVANAAASALDQAFGSGGVPPLA-- 241
Query: 668 PKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P A+P T +L L N+ E ++ + + E E+VR E ++G++ S+ +
Sbjct: 242 PPTAMP-GSTVTRILVLLNMVMDEDLATAEDRKFLE--EEVREEVGKYGTLLSMKI 294
>gi|302813497|ref|XP_002988434.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
gi|300143836|gb|EFJ10524.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
Length = 339
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 28/299 (9%)
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQHV 496
+ + A +A+L V + Q+ Q +P RR+ V LP E + F N+ + + G +
Sbjct: 2 VVLPAGIAQLPVVLRMPQMPQITKPARRVYVGGLPAVVDEARIATFFNHAMAVIEGNTYG 61
Query: 497 HGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEV 551
G + I K AFVE + E+AS A+ DG F GS ++I+RP + +
Sbjct: 62 QGGDAVVSVFIDHAKNYAFVEMRSVEEASNAMALDGIIFEGSQVRIRRPSNYNPEHAMLF 121
Query: 552 ASGEAEKSVASVDSVSGIVK---DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEV 608
S + S+ +D V + + D P +IFIGG+ V +++ FG L+A ++
Sbjct: 122 GSSQPSPSL-RLDKVGLVYRAHADGPDRIFIGGLPYEWGDAEVRQLLEPFGALRA--LDI 178
Query: 609 NED----HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
+D + F Y + T A A LN + G++L +A ++SGNP
Sbjct: 179 VKDSYTRKSKGYGFAVYENPASTDAACAALNQKPLEGKILRVHRAT------NSSGNPAL 232
Query: 665 HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+P+ + + T V+ L N + E E E E++ED++ EC ++G + SV +
Sbjct: 233 VLLPQSS----ELGTRVVCLCNAVSEEMLR--DEKEYAEIIEDMKEECGKYGPLVSVEI 285
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ + N + + G + I +K AFVE
Sbjct: 208 QATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 267
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V G
Sbjct: 268 MRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSA 327
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 328 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 385
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 386 NVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGAL- 444
Query: 677 KPTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V S EL E E+++ED+RLE ++G++ V +
Sbjct: 445 -PTKVVCLTQVV------SADELKDDEEYEDIMEDMRLEAGKYGNLIKVVI 488
>gi|451849636|gb|EMD62939.1| hypothetical protein COCSADRAFT_200575 [Cochliobolus sativus
ND90Pr]
Length = 576
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 22/263 (8%)
Query: 387 EKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAK 446
+++ +WD+ P ++ T+ QA S + + LA ++
Sbjct: 187 QRRMTQWDIKPAGYENI-----TAEQAKLSGMFPLPGAPRAAPMDPSKLAAFISPSTGTA 241
Query: 447 LNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
++ + QS +RL V NLP + + +MEF N L +G+ V G PC+
Sbjct: 242 TAAALATSAAKQS----KRLYVHNLPSGCTSQEIMEFFNTQL--NGLNVVSGPDPCVSAH 295
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSG-------SILKIKRPKEFVEVASGEAEKS 559
I K A +EF EDA+ AL +G S + L I+RPK+++ + E +
Sbjct: 296 IATSKEYAALEFKAPEDATLALAMNGISMRDDGGAPDRAGLSIRRPKDYITPTADE--NA 353
Query: 560 VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCA 617
D VS +VKDSP+K+ I I + + + E+V G LKA+ + + D A
Sbjct: 354 YPPGDEVSSVVKDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTSTDQHRGIA 413
Query: 618 FIEYVDQLVTPKAIAGLNGLKVG 640
F EY D + I GLN + +G
Sbjct: 414 FCEYADNEIIDAVIEGLNDIPLG 436
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 37/306 (12%)
Query: 444 LAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI 503
L L V Q+ R R+ V LP +A+E+++ F + + + G +
Sbjct: 235 LGALPVLPVQAMTQQATRHAPRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVV 294
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK-- 558
I EK AFVE + E+AS A+ DG G +K++RP ++ + G ++
Sbjct: 295 NVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNP 354
Query: 559 --SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--H 612
++ +V SG + P +IF+GG+ + + E++ +FGPL+ ++ + + +
Sbjct: 355 NLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGN 414
Query: 613 EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHAL 672
+ AF Y D VT A A LNG+K+G + LT V+ + G+I P+
Sbjct: 415 SKGYAFCVYQDPSVTDIACAALNGIKMGDKTLT-VRRAIQGAIQPK---------PEQEE 464
Query: 673 PLLKKPTEVLKLKNVFNPEGFSS----LSEL----------EVEEVLEDVRLECARFGSV 718
LL ++ + +F P G + L+++ E E++ED+R E +FG++
Sbjct: 465 VLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNL 524
Query: 719 KSVNVV 724
VNVV
Sbjct: 525 --VNVV 528
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E + + N + + G + I +K AFVE
Sbjct: 232 QATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVE 291
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 292 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSA 351
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 352 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 409
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK------- 677
VT A A LNG+K+G + LT +A S + + A ++K
Sbjct: 410 NVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQA--QMQKLMFQVGG 467
Query: 678 ---PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V +P+ + E E++++D+R E R+G++ V +
Sbjct: 468 GALPTKVVCLTQVISPDELR--DDEEYEDIVQDMREEGCRYGNLVKVVI 514
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 140/293 (47%), Gaps = 39/293 (13%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
QS R RR+ V AS+ ++ F N +++ ++ + P + + R+K AF+E
Sbjct: 84 QSTRHARRVYVGGNFGDASDFEVLAFFNQ-IINESLERPSPAGPVVAIQVNRQKHFAFLE 142
Query: 518 FLTAE-DASAALCCDGCSFSGSILKIKRPKEF--------------VEVASGEAEKSVAS 562
+ S + DG F G+ LK+KRP ++ ++VA+ A ++ +
Sbjct: 143 LNSVPLTTSVIMQLDGVPFRGNPLKVKRPTDYHPELLPLDTPPPPTLKVANFRALQASGA 202
Query: 563 VDSVS-GI-------VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--- 611
+ S G+ V DSP+KIF+GG+ ++ V E++ AFGPL+ F++ +D
Sbjct: 203 LPMASTGLTAPGANSVPDSPYKIFVGGLPYHVTDDQVRELLSAFGPLRG--FDLKKDPAT 260
Query: 612 -HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH 670
+ F EY+D V AI GL+G+ +GG+ LT A+ +
Sbjct: 261 GMSKGYGFCEYIDHAVGDVAIQGLHGMDLGGKTLTVKYALASQQLQQQQSMQQMLLSTTP 320
Query: 671 ALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
A T+VL L N+ P+ + E +E++EDVR E A+FG V S+ +
Sbjct: 321 A-------TKVLVLANMVTPDELK--DDQEYQEIVEDVREEVAKFGEVLSLVI 364
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ + N + + G + I +K AFVE
Sbjct: 208 QATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 267
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V G
Sbjct: 268 MRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSA 327
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 328 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 385
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 386 NVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGAL- 444
Query: 677 KPTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V S EL E E+++ED+RLE ++G++ V +
Sbjct: 445 -PTKVVCLTQVV------SADELKDDEEYEDIMEDMRLESGKYGNLIKVVI 488
>gi|357160098|ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N+ + + G + I +K AFVE
Sbjct: 193 QATRHARRVYVGGLPPSANEQTVAIYFNHVMAAIGGNAAGLGDAVVNVYINHDKKFAFVE 252
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF-------VEVASGEAEKSVASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + + ++A+V G
Sbjct: 253 MRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSQAAVLGPSQPNPNLNLAAVGLTPGSA 312
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ FGPL+ F++ +D E + AF Y D
Sbjct: 313 GGLEGPDRIFVGGLPYYFTEAQVQELLETFGPLRG--FDIVKDRETGNSKGYAFCVYQDL 370
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK------- 677
VT A A LNG+++G + LT +A N G P+H LL+
Sbjct: 371 AVTDIACAALNGIQLGDRTLTVRRA--------NQGAA--EPRPEHENILLQAQHQAQMK 420
Query: 678 ----------PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
PT+V+ L V + + ++ E +++LED+ E ++G++
Sbjct: 421 KLVYEVGGAIPTKVVCLTQVVSEDDLR--NDEEYKDILEDMTFEGRKYGNL 469
>gi|224094725|ref|XP_002310209.1| predicted protein [Populus trichocarpa]
gi|222853112|gb|EEE90659.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 57/336 (16%)
Query: 427 VTSTTQKPLAG-------ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKA 479
+T TT P+ G + L V Q+ R RR+ V LP A+E++
Sbjct: 17 ITGTT-PPIPGMFPNMFPLGTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPIANEQS 75
Query: 480 LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI 539
+ F + + + G + I EK AFVE + E+AS A+ DG F G+
Sbjct: 76 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 135
Query: 540 LKIKRPKEF---VEVASGEAEK----SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKM 590
+K++RP ++ + G ++ ++A+V G + P +IF+GG+ +
Sbjct: 136 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 195
Query: 591 VMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTA 646
+ E++ +FG L+ F++ +D E + AF Y D VT A A LNG+K+G + LT
Sbjct: 196 IRELLESFGALRG--FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 253
Query: 647 VQAVLDGSIMDNSG-NPP--------FHGIPKHALP--LLKKP---TEVLKLKNVFNPEG 692
+A N G N P H + AL +L+ P T+V+ L V
Sbjct: 254 RRA--------NQGTNQPKPEQENVLLHAQQQIALQRLMLQPPPVVTKVVCLTQV----- 300
Query: 693 FSSLSEL----EVEEVLEDVRLECARFGSVKSVNVV 724
++ EL E E++LED+R+E +FG + VNVV
Sbjct: 301 -VTVDELKDDDEYEDILEDIRMEAGKFGQL--VNVV 333
>gi|413920210|gb|AFW60142.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 364
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N + + G + I +K AFVE
Sbjct: 24 QATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 83
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGI- 569
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V +G
Sbjct: 84 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGSN 143
Query: 570 -VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 144 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 201
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 202 TVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGAL- 260
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 261 -PTKVVCLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGNLVKVII 304
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP A+E+ + F N + + G + I +K AFVE
Sbjct: 266 QATRHARRVYVGGLPPIANEQTVAVFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVE 325
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ A G ++ + +A+V G
Sbjct: 326 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPGAG 385
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ FGPL+ F++ +D E + AF Y D
Sbjct: 386 GGLEGPDRIFVGGLPYYFTEAQVRELLETFGPLRG--FDIVKDKETGNSKGYAFCLYKDG 443
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+++G + LT +A
Sbjct: 444 TVTDIACAALNGIQLGDRTLTVRRA 468
>gi|159473054|ref|XP_001694654.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158276466|gb|EDP02238.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 306
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ F ++ L + G + I REK AFVE
Sbjct: 7 QATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGNAVVNVYINREKNFAFVE 66
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKSVASVDSVSGI-VKDS 573
T E+ S ++ DG F G ++++RP ++ V+ G + + A + G+ D+
Sbjct: 67 LRTVEETSNSMALDGIMFEGVSVRVRRPNDYNPAAAVSLGPSTPNPALNLAAIGLNPNDN 126
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTPKAI 631
P +IF+GG+ L+ E++ +FG +K++ + D + + F+ Y D VT A
Sbjct: 127 PDRIFVGGLPYYLTEDQCRELLGSFGAIKSFDLVKDRDTGNSKGYGFVVYQDTSVTDIAC 186
Query: 632 AGLNGLKVGGQVLTAVQA 649
AGLNGLK+G + LT +A
Sbjct: 187 AGLNGLKMGDRTLTVRRA 204
>gi|242069431|ref|XP_002449992.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
gi|241935835|gb|EES08980.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
Length = 296
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 34/285 (11%)
Query: 456 LTQ-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQA 514
+TQ + R RR+ V LP A+E+ + + N + + G + I +K A
Sbjct: 11 MTQHATRHARRVYVGGLPPDANEQTVAVYFNQIMAAIGGNTAGPGDAVLNVYINHDKKFA 70
Query: 515 FVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS------VASVDS 565
VE + E+AS A+ DG F G +K++RP ++ + A G ++ S + +
Sbjct: 71 SVEMRSVEEASNAMALDGIMFEGVPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTA 130
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEY 621
SG ++D P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF +Y
Sbjct: 131 GSGGLED-PDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDKETGNSKGYAFCDY 187
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGI----------PKHA 671
D VT A A LNG+K+G ++LT +A S P I K A
Sbjct: 188 QDLTVTDIACAALNGIKMGDKILTVRRANQGAS----QPTPEQESILLQAQQQVQMQKLA 243
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFG 716
P+ PT+V+ L +V + + L + E++++D+R E R+G
Sbjct: 244 HPVGAAPTKVVCLVHVVSAD---ELEDEVYEDIMDDMREEARRYG 285
>gi|159487587|ref|XP_001701804.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158281023|gb|EDP06779.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 309
Score = 94.0 bits (232), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 98/176 (55%), Gaps = 10/176 (5%)
Query: 483 FLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKI 542
F N +++SG G P + C + +K AF+E E+ S A+ DG G +LK+
Sbjct: 1 FFNQIMMASGATTQPGP-PVMSCFMNNDKRFAFLEMRCVEETSNAMAFDGIQCQGEVLKV 59
Query: 543 KRPKEFVEVAS---GEAEKS----VASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIV 595
+RP ++ A+ G + S +A + ++ +V+D P+K++IGG+ LS + V +I+
Sbjct: 60 RRPHDYNPAAAKLLGPTDPSPKVNLALLGVINTLVEDGPNKVYIGGLPACLSEEQVRQIL 119
Query: 596 CAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
AFG LKA++ ++ + + + F EY D VT AI GL+ L + G+ LTA +A
Sbjct: 120 QAFGTLKAFNLVLDRETGNSKGYGFCEYADPSVTDSAIQGLSALIIQGKPLTARRA 175
>gi|168021052|ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685868|gb|EDQ72261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 34/353 (9%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
+K + +D+AP P S A + + P P G +
Sbjct: 99 RKQSGFDMAP------PGAAVVSGAALAGQIPGIAQPMPGVYPGMFPFGGTQQFGGIP-- 150
Query: 448 NVSMDSVQLTQ-SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
M + +TQ + R RR+ V LP A+E+ + + + + + G +
Sbjct: 151 --GMPAQAMTQQATRHARRVYVGGLPPLANEQTIATYFSQVMAAVGGNTAGPGDAVVNVY 208
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS---- 559
I +EK AFVE T E+AS A+ DG F G ++++RP ++ + G ++ S
Sbjct: 209 INQEKKFAFVEMRTVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLN 268
Query: 560 VASVDSVSGIV---KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEE 614
+A+V G D P +IF+GG+ L+ + E++ +FGPL+ + + D + +
Sbjct: 269 LAAVGLTPGNAAGGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSK 328
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD-GSIMDNSGNPPFHGIPKHALP 673
F Y D V A A LNG+K+ + L +A + N H + A+
Sbjct: 329 GYGFCVYQDPSVVDIACATLNGMKMDDKTLNVRRATARLARPKPDQANVLAHAQQQIAIQ 388
Query: 674 LL--------KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
+L + PT V+ L V +P+ + E +++LED++ EC ++G++
Sbjct: 389 VLVYSWMSPVETPTNVVALTQVVSPDELK--DDEEYQDILEDMKEECGKYGNL 439
>gi|397633851|gb|EJK71162.1| hypothetical protein THAOC_07424, partial [Thalassiosira oceanica]
Length = 449
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 391 AKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS---VSASLAKL 447
+K+D+ P + +AA +H M + TS G + V+ S A +
Sbjct: 175 SKFDIEPTQE----QLAEQQQRAALELSHGMTRNTGATSAHGGLNGGFTPAPVAGSFANM 230
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV----HGSL--- 500
N R RRL + N+P SE + F + S + + + L
Sbjct: 231 N--------PNQTRHARRLYIGNIP-DISETEIHSFFRKTIEKSLIMNRDDKNYAQLQEE 281
Query: 501 -----PCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSG-SILKIKRPKEFVEVASG 554
P + I RE+ AF+EF T + +A L DG G +K+KRP ++ +
Sbjct: 282 YIANDPIVSVYINRERRFAFIEFRTMDITTACLSLDGIDVEGRGKVKVKRPNDYNASLAP 341
Query: 555 EAEKSV----ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF---E 607
+ V A + VS V D P+KIFIGG+ L+ V+E++ AFG ++A+H E
Sbjct: 342 QTSNGVSLDTAKLGLVSSTVPDGPNKIFIGGLPYHLTESQVLELLGAFGSVRAFHLVKSE 401
Query: 608 VNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
+ + F+EY D +T A GLNG+ +GG
Sbjct: 402 PSATTSKGYCFVEYADPNITQVACMGLNGMDLGG 435
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E + + N + + G + I +K AFVE
Sbjct: 232 QATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVE 291
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 292 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSA 351
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 352 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 409
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK------- 677
VT A A LNG+K+G + LT +A S + + A ++K
Sbjct: 410 NVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQA--QMQKLMFQVGG 467
Query: 678 ---PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V +P+ + E E++++D+R E R+G++ V +
Sbjct: 468 GALPTKVVCLTQVVSPDELR--DDEEYEDIVQDMREEGCRYGNLVKVVI 514
>gi|413920211|gb|AFW60143.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 367
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N + + G + I +K AFVE
Sbjct: 27 QATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 86
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGI- 569
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V +G
Sbjct: 87 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGSN 146
Query: 570 -VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 147 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 204
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 205 TVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVGAL- 263
Query: 677 KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 264 -PTKVVCLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGNLVKVII 307
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP SA+E+ + + N + + G + I +K AFVE
Sbjct: 199 QATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 258
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGI- 569
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V +G
Sbjct: 259 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTAGSN 318
Query: 570 -VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 319 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 376
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 377 TVTDIACAALNGIKMGDKTLTVRRA 401
>gi|449680331|ref|XP_002158219.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 259
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 9/208 (4%)
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKI 577
F + E+ + A+ DG G LKI+RPK++ + ++ VS +V D+ +K+
Sbjct: 1 FRSVEETTLAMAFDGIMLQGQALKIRRPKDYQPIPGISEMQATHIPGVVSTVVSDTINKV 60
Query: 578 FIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLN 635
F+GG+ L+ V E++ FG L++++ + + AF EYVD +T AIAG+N
Sbjct: 61 FVGGLPNYLNEDQVKELLSTFGDLRSFNLVKDSATGLSKGYAFCEYVDIGITDVAIAGMN 120
Query: 636 GLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSS 695
G+++G + L +A + M N P + K T +L L N+ +
Sbjct: 121 GMQLGDKKLVVQRASVGSKTMTAQLNIPGFDLSKEI-----TATNILCLMNMVVADEL-- 173
Query: 696 LSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + + +E+ ED+R EC+++G ++S+ +
Sbjct: 174 IDDEDYDEIFEDIREECSKYGRIRSMQI 201
>gi|359497050|ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 410
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP A+E+ + F + + + G + I EK AFVE
Sbjct: 101 QATRHARRVYVGGLPPLANEQTIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 160
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G ++++RP ++ + A G ++ S +A+V + G++
Sbjct: 161 MRSVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLAAVGLMPGVI 220
Query: 571 --KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLV 626
+ P +IF+GG+ + + + E++ +FGPL+ + + D + + F Y D V
Sbjct: 221 GGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 280
Query: 627 TPKAIAGLNGLKVGGQVLTAVQAVL 651
T A A LNGLK+G + LT +A +
Sbjct: 281 TDIACAALNGLKMGDKTLTVRRATV 305
>gi|195393580|ref|XP_002055432.1| GJ19364 [Drosophila virilis]
gi|194149942|gb|EDW65633.1| GJ19364 [Drosophila virilis]
Length = 476
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 27/203 (13%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 39 KPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTIT------ 89
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
R RRL V N+P +E+ +MEF N + G+ GS P + C I
Sbjct: 90 -------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQI 135
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVA----SGEAEKSVASV 563
+K AF+EF + ++ + A+ DG + G LKI+RP ++ + + + +V S
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQDLKIRRPHDYQPMPGITDTPAVKPAVVSS 195
Query: 564 DSVSGIVKDSPHKIFIGGISRTL 586
+S +V DSPHKIFIGG+ L
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYL 218
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 587 SSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL 644
+S+ V E++ +FG L+A++ + + AF EYVD +T ++IAGLNG+++G + L
Sbjct: 279 TSRFVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGLNGMQLGDKKL 338
Query: 645 TAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLK-KPTEVLKLKNVFNPEGFSSLSELE 700
+A + N+ N +P + + PTEVL L N+ P+ E E
Sbjct: 339 IVQRASVGAKNAQNAANTSQSVMLQVPGLSTVVTSGPPTEVLCLLNMVTPDELR--DEEE 396
Query: 701 VEEVLEDVRLECARFGSVKSVNV 723
E++LED++ EC ++G V+SV +
Sbjct: 397 YEDILEDIKEECTKYGVVRSVEI 419
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ + N + + G + I +K AFVE
Sbjct: 26 QATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 85
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V G
Sbjct: 86 MRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSA 145
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 146 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 203
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 204 NVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGAL- 262
Query: 677 KPTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V S EL E E+++ED+RLE ++G++ V +
Sbjct: 263 -PTKVVCLTQVV------SADELKDDEEYEDIMEDMRLEAGKYGNLIKVVI 306
>gi|403331270|gb|EJY64574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 565
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V +P S S+ +++FL L +G G P I EK F+E + E+
Sbjct: 190 RRLYVGGVPTSQSDVQVVQFLTQTLRKAGGILEEGD-PVIKSQNNPEKRYTFLELRSVEE 248
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF-----VEVASGEAEKSVASVDSVSGIVKDSPHKIF 578
AS + DG F S L+I+RP+++ + + A++ +S V+++P KIF
Sbjct: 249 ASTMIQLDGIKFMDSTLRIRRPEDYDKYPQIPPRRPIPQIDTAALGIISTKVEETPLKIF 308
Query: 579 IGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNG 636
+GG+ + + + + ++ +G LK++H N D AF EY D+ AI LNG
Sbjct: 309 VGGLPKEFNEEQIKNLLLRYGQLKSFHLVKHTNIDQSRGFAFCEYTDEKGVQNAIQFLNG 368
Query: 637 LKVG 640
LK+G
Sbjct: 369 LKIG 372
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ + N + + G + I +K AFVE
Sbjct: 38 QATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 97
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V G
Sbjct: 98 MRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSA 157
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 158 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 215
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDG--------SIMDNSGNPPFHGIPKHALPLLK 676
VT A A LNG+K+G + LT +A SI+ + + + L
Sbjct: 216 NVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVGAL- 274
Query: 677 KPTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
PT+V+ L V S EL E E+++ED+RLE ++G++ V +
Sbjct: 275 -PTKVVCLTQVV------SADELKDDEEYEDIMEDMRLEAGKYGNLIKVVI 318
>gi|145344032|ref|XP_001416543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576769|gb|ABO94836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 28/288 (9%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V +PL+ +E + F NN LL+ G + P + I EK AFVE
Sbjct: 3 QATRHARRIYVGGIPLTTNEADVNAFFNNALLAVGGTNGAEGQPVVNVYINVEKKFAFVE 62
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF----------------VEVASGEAEKSVA 561
F + E+AS AL DG G ++I+RP ++ + +A+ + S
Sbjct: 63 FRSVEEASNALALDGIVLDGVPVRIRRPNDYNPSLAHDLGPSMPNPALNLAAIGLDPSAL 122
Query: 562 SVDSVSG-IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPC 616
V G ++ + +IFIGG+ L + E++ AFGP++ F++ D E +
Sbjct: 123 QRAGVGGNLLHEHEDRIFIGGLPYFLDEAQIRELLEAFGPIR--QFDLVRDKETGNSKGY 180
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK 676
F+ Y D VT A GLNG+ +G + LT +A + S P +P +
Sbjct: 181 GFVVYEDVSVTDIACQGLNGMTMGDKTLTVRRA--EQSNAPGGVQPGMMNVPPPPPAIAA 238
Query: 677 KPTEVLKLKNVFNPEGFSS---LSELEVEEVLEDVRLECARFGSVKSV 721
PT F+ G + + E E ++ED++ EC + G + SV
Sbjct: 239 PPTNPPSTVVSFDNMGLTEEELADDEEYENIMEDMQEECGKHGEIVSV 286
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|19310597|gb|AAL85029.1| putative splicing factor [Arabidopsis thaliana]
gi|332661289|gb|AEE86689.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 542
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 34/315 (10%)
Query: 449 VSMDSVQLT--QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
+SM +Q Q+ R RR+ V L +A+E+++ F + + + G +
Sbjct: 222 LSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVY 281
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS---- 559
I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ S
Sbjct: 282 INHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLN 341
Query: 560 VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE---- 613
+A+V G + P +IF+GG+ + V E++ +FG LK F++ +D E
Sbjct: 342 LAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKG--FDLVKDRETGNS 399
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIPKHA 671
+ AF Y D VT A A LNG+K+G + LT V+ G+++ N H + A
Sbjct: 400 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGTMLQKPEQENVLLHAQQQIA 458
Query: 672 LP-LLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFG----SVKSVN 722
++ +P T V+ L V + + E +++ED+R E +FG + +
Sbjct: 459 FQRVMLQPGAVATTVVCLTQVVTEDELR--DDEEYGDIMEDMRQEGGKFGKRPLNCAIWS 516
Query: 723 VVKYGDSNISTIQAC 737
++KY I +I C
Sbjct: 517 ILKY---KIKSILIC 528
>gi|312372039|gb|EFR20089.1| hypothetical protein AND_20681 [Anopheles darlingi]
Length = 384
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 383 NRSPEKK-SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVS 441
NRS +K S WDV P + + + QAA +V+ P + P+ G +++
Sbjct: 82 NRSRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAV---PVVGSTIT 138
Query: 442 ASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLP 501
R RRL V N+P +E+ +MEF N + SG+ G+ P
Sbjct: 139 -------------------RQARRLYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGN-P 178
Query: 502 CIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVA 561
+ C I +K AF+EF + ++ + A+ D +F G LKI+RP ++ + G + +
Sbjct: 179 VLACQINLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDY-QPMPGMTDSATV 237
Query: 562 SVDS-----VSGIVKDSPHKIFIGGISRTLSSKMV--MEIVCAFGP 600
+V +S +V DS HKIFIGG+ L+ V + +V + GP
Sbjct: 238 NVPEKFSGVISTVVPDSAHKIFIGGLPNYLNEDQVPGLSLVGSSGP 283
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PTEVL L N+ P+ E E E++LED+R EC ++G V+SV +
Sbjct: 284 PTEVLCLLNMVTPDELKD--EEEYEDILEDIREECNKYGVVRSVEI 327
>gi|108864608|gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 15/205 (7%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E + + N + + G + I +K AFVE
Sbjct: 232 QATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVE 291
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 292 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSA 351
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 352 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 409
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQA 649
VT A A LNG+K+G + LT +A
Sbjct: 410 NVTDIACAALNGIKMGDKTLTVRRA 434
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 504 GCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
G I +EK +VEF++++ A F G+ ++ KRPK+FV +
Sbjct: 173 GVEINKEKDYVWVEFVSSDLAQVVFNKKDLDFDGAPIEPKRPKDFV---------GIDPA 223
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEY 621
G+ D +K+F+GG+ TL S V E++ FG L+ ++ E N + AF+E+
Sbjct: 224 LGFMGVSGDPNNKLFVGGLPTTLGSDEVKELLTPFGELRTFNLVKEGNGSVSKGFAFVEF 283
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG---SIMDNSGNPPFHGIPKHALPLLKKP 678
+D VT AI GLNG ++G + L +A G S SG F L +P
Sbjct: 284 LDPAVTDIAIQGLNGFQLGDRALVVQRAATTGRSASSTGVSGTAQFLA-QSSILEKADEP 342
Query: 679 TEVLKLKNVFNPEGFSSL-SELEVEEVLEDVRLECARFGSVKSVNV 723
++ + N G L + + ++LED+R EC++FG V+ V +
Sbjct: 343 APATRVILMLNMVGADELYDDQDYADILEDIRDECSKFGEVEGVRI 388
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
Q+ R RR+ V LP +A+E+++ + N + + G + I +K AF
Sbjct: 227 FPQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAF 286
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSG 568
VE + E+AS A+ DG F G+ +K++RP ++ + A G ++ S +A+V G
Sbjct: 287 VEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLASALGPSQPSSNLNLAAVGLTPG 346
Query: 569 IVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYV 622
+ P +IF+GG+ + V E++ +FG L+ F++ +D E + AF Y
Sbjct: 347 SAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGSLRG--FDLVKDRETGNSKGYAFCVYQ 404
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN----PPFHGI----------P 668
D VT A A LNG+K+G + LT +A N G+ P I
Sbjct: 405 DLNVTDIACAALNGIKMGDKTLTVRRA--------NQGSAQPRPEQENILLQAQQQVQLQ 456
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
K + PT+V+ L V + + E E+++ED+RLE ++G++ V +
Sbjct: 457 KLVYQVGALPTKVICLTQVVTADELK--DDEEYEDIMEDMRLEAGKYGTLVKVVI 509
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661288|gb|AEE86688.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 565
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 27/305 (8%)
Query: 449 VSMDSVQLT--QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
+SM +Q Q+ R RR+ V L +A+E+++ F + + + G +
Sbjct: 222 LSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVY 281
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS---- 559
I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ S
Sbjct: 282 INHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLN 341
Query: 560 VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE---- 613
+A+V G + P +IF+GG+ + V E++ +FG LK F++ +D E
Sbjct: 342 LAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKG--FDLVKDRETGNS 399
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIPKHA 671
+ AF Y D VT A A LNG+K+G + LT V+ G+++ N H + A
Sbjct: 400 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGTMLQKPEQENVLLHAQQQIA 458
Query: 672 LP-LLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
++ +P T V+ L V + + E +++ED+R E +F + + Y
Sbjct: 459 FQRVMLQPGAVATTVVCLTQVVTEDELR--DDEEYGDIMEDMRQEGGKFAFCYKESALTY 516
Query: 727 GDSNI 731
D +
Sbjct: 517 TDRRL 521
>gi|297735185|emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 51/321 (15%)
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV 493
PLA S L V Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 33 PLA----SGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGG 88
Query: 494 QHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VE 550
+ I EK AFVE + E+AS A+ DG F G+ +K++RP ++ +
Sbjct: 89 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLA 148
Query: 551 VASGEAEK----SVASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
G ++ ++A+V G + P +IF+GG+ + + E++ +FGPL+
Sbjct: 149 ATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRG- 207
Query: 605 HFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSG 660
F++ +D E + AF Y D VT A A LNG+K+G + LT +A N G
Sbjct: 208 -FDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA--------NQG 258
Query: 661 ---------NPPFHGIPKHALP-LLKKP----TEVLKLKNVFNPEGFSSLSELE----VE 702
N H + AL L+ +P T+V+ L V N + EL+ E
Sbjct: 259 ASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNAD------ELQDDEAYE 312
Query: 703 EVLEDVRLECARFGSVKSVNV 723
+++ED+R+E +FG++ +V +
Sbjct: 313 DIVEDMRIEGGKFGNLVNVAI 333
>gi|452001453|gb|EMD93912.1| hypothetical protein COCHEDRAFT_1020092 [Cochliobolus
heterostrophus C5]
Length = 352
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
+RL V NLP + + +MEF N L +G+ V G PC+ I K A +EF ED
Sbjct: 31 KRLYVHNLPSGCTSQEIMEFFNTQL--NGLNVVSGPDPCVSAHIATSKEYAALEFKAPED 88
Query: 524 ASAALCCDGCSFSG-------SILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK 576
A+ AL +G S + L I+RPK+++ + E + D VS +VKDSP+K
Sbjct: 89 ATLALAMNGISMRDDGGAPDRAGLSIRRPKDYITPTADE--NAYPPGDEVSSVVKDSPNK 146
Query: 577 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 634
+ I I + + + E+V G LKA+ + + D AF EY D + I GL
Sbjct: 147 LSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTSTDQHRGIAFCEYADNEIIDAVIEGL 206
Query: 635 NGLKVG 640
N + +G
Sbjct: 207 NDIPLG 212
>gi|384249807|gb|EIE23288.1| hypothetical protein COCSUDRAFT_23864, partial [Coccomyxa
subellipsoidea C-169]
Length = 464
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP + +E+ + F +N L + G + I EK AFVE
Sbjct: 134 QATRHARRVYVGGLPPTGNEQNIATFFSNALAAIGGTTAGPGASVVNVYINYEKKFAFVE 193
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSV-------ASVDSVSG-- 568
F T E+ S A+ DG F G ++++RP ++ A+ SV A++ +G
Sbjct: 194 FRTVEETSNAMALDGIMFEGVSVRVRRPNDYNPAAASALGPSVPNPNLNLAAIGLQAGGM 253
Query: 569 ---IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEY 621
+ D+ ++F+GG+ L+ + E++ +FG +K+ F++ +D E + F+ Y
Sbjct: 254 NAVAMIDAAERVFVGGLPYYLNEEQCRELLGSFGGIKS--FDLVKDRETGNSKGYGFVVY 311
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN-------SGNPPFHGIPKHALPL 674
D VT A AGLNG+++G + LT +A + S +P
Sbjct: 312 TDPNVTDIACAGLNGMRMGERTLTVRRATENQGGAAGAATAAALSADP------------ 359
Query: 675 LKKPTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
T +L L+ SL EL E ++++D+R E ++FG+V V +
Sbjct: 360 FPTATRILALQEAV------SLDELANDEEYVDIVQDMRDEASKFGTVIDVLI 406
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 27/305 (8%)
Query: 449 VSMDSVQLT--QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCV 506
+SM +Q Q+ R RR+ V L +A+E+++ F + + + G +
Sbjct: 222 LSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVY 281
Query: 507 IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS---- 559
I EK AFVE + E+AS A+ DG F G+ +K++RP ++ + G ++ S
Sbjct: 282 INHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLN 341
Query: 560 VASVDSVSGIVK--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE---- 613
+A+V G + P +IF+GG+ + V E++ +FG LK F++ +D E
Sbjct: 342 LAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKG--FDLVKDRETGNS 399
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN--SGNPPFHGIPKHA 671
+ AF Y D VT A A LNG+K+G + LT V+ G+++ N H + A
Sbjct: 400 KGYAFCVYQDLSVTDIACAALNGIKMGDKTLT-VRRANQGTMLQKPEQENVLLHAQQQIA 458
Query: 672 LP-LLKKP----TEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKY 726
++ +P T V+ L V + + E +++ED+R E RF + + Y
Sbjct: 459 FQRVMLQPGAVATTVVCLTQVVTEDELR--DDEEYGDIMEDMRQEGGRFAFCYKESALTY 516
Query: 727 GDSNI 731
D +
Sbjct: 517 TDRRL 521
>gi|302796203|ref|XP_002979864.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
gi|300152624|gb|EFJ19266.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
Length = 325
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL-LSSGVQHVHGSLPCIGCVIQREKGQ 513
Q+ Q +P RR+ V LP E + F N+ + + G + G + I K
Sbjct: 3 QMPQITKPARRVYVGGLPAVVDEARIATFFNHAMAVIEGNTYGQGGDAVVSVFIDHAKNY 62
Query: 514 AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEVASGEAEKSVASVDSVSG 568
AFVE + E+AS A+ DG F GS ++I+RP + + S + S+ +D V
Sbjct: 63 AFVEMRSVEEASNAMALDGIIFEGSQVRIRRPSNYNPEHAMLFGSSQPSPSL-RLDKVGL 121
Query: 569 IVK---DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED----HEEPCAFIEY 621
+ + D P +IFIGG+ V +++ FG L+A ++ +D + F Y
Sbjct: 122 VYRAHADGPDRIFIGGLPYEWGDAEVRQLLEPFGALRA--LDIVKDSYTRKSKGYGFAVY 179
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEV 681
+ T A A LN + G++L +A ++SGNP +P+ + + T V
Sbjct: 180 ENPASTDAACAALNQKPLEGKILRVHRAT------NSSGNPALVLLPQSS----ELGTRV 229
Query: 682 LKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ L N + E E E E++ED++ EC ++G + SV +
Sbjct: 230 VCLCNAVSEEMLR--DEKEYAEIIEDMKEECGKYGPLVSVEI 269
>gi|307108143|gb|EFN56384.1| expressed protein [Chlorella variabilis]
Length = 404
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQA 514
QL Q RPMRRL V LP + L FLN L++ G+ V G P I C + E+ A
Sbjct: 243 QLNQMTRPMRRLYVGGLPQPCYDFMLTTFLNQALMALGICQVAGKAPIIACQVTPERNFA 302
Query: 515 FVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
F+EF DA+AAL DG F G+ LKIKRPK++
Sbjct: 303 FIEFGDTSDATAALQLDGIPFRGNTLKIKRPKDY 336
>gi|449299113|gb|EMC95127.1| hypothetical protein BAUCODRAFT_526859 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 39/288 (13%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
R +RL N+P + +E + +F N L +G+ G PCI + ++ A ++F T
Sbjct: 101 RQSKRLFAYNIPPNVNESMISDFFN--LQLNGLNVTRGVDPCISAQLSQDLTYALLDFKT 158
Query: 521 AEDASAALCCDGCS-------FSGSI------LKIKRPKEFVEVASGEAEKSVASVDSVS 567
+EDA+ A+ DG + +GS L I+RPK+++ A + + A V +S
Sbjct: 159 SEDATNAMALDGITMPEHMEVMNGSANGNSQGLIIQRPKDYIVPAVVDDTEHEAGV--LS 216
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD-Q 624
V D+ KI I I L+ + V E++ +FG LK + + D AF EY D +
Sbjct: 217 STVPDTQFKISITHIPSYLTEEQVQELLVSFGELKNFVLVKDAGTDQSRGIAFCEYKDAK 276
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHG-IPKHALPLL-------- 675
T A+ LNG+++G L +A + G G + +A+ ++
Sbjct: 277 NTTDIAVESLNGMELGDSHLKVQRASI--------GTQQVGGEMTVNAMSMMASAAGGAD 328
Query: 676 KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ + VL L N+ PE + E +E+LEDV+ ECA++G++ V +
Sbjct: 329 RDASRVLCLMNMITPEEL--MDADEADEILEDVKEECAKYGAIIDVKM 374
>gi|299470773|emb|CBN79819.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 636
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q R RRL + P +E+ + F N +++ +++ + +EK AF+E
Sbjct: 241 QQTRHARRLYIGGCP-KTTEEEMSSFFNE-VINRALEYPIDGGAVASVYVSQEKAFAFLE 298
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF----VEVASGEAEK-SVASVDSVSGIVKD 572
T E A++ L DG + + LK++RP ++ V ASG K +++ + +S V D
Sbjct: 299 LKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPD 358
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCA----FIEYVDQLVTP 628
S +K+FIGG+ L+ V E++ AFGPLK++H + D P + F EY++ VT
Sbjct: 359 SDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFH--LVRDPGSPTSKGYGFCEYLNAGVTA 416
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDGS 654
A GL+G+ +G + LT A GS
Sbjct: 417 IACEGLHGMTLGDKTLTVRPATDRGS 442
>gi|237838479|ref|XP_002368537.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966201|gb|EEB01397.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|221505828|gb|EEE31473.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 816
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 36/234 (15%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
L+ +R R++ V NLP+ ++ + ++ N L + + V G + + + AF
Sbjct: 271 LSAQSRHARKVYVGNLPVPVTQAEVQQYFNELLTTLLPKKVPGDT-IVHVYVNPSRRFAF 329
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEF--------------------------- 548
+E + E+A+ L DG S+ L ++RP+++
Sbjct: 330 LEHRSIEEANFTLGLDGVSWRNCALSLRRPQDYNPTLAEQQYREERARLGSMTGFAVPPP 389
Query: 549 --VEVASGEAEKSV--ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
+ AE S+ ++ VS V DSPHKIFIGG+ +++ + +++ AFG L+A
Sbjct: 390 SQAATPASPAESSLIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRAL 449
Query: 605 HFEVNEDHEEPC---AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSI 655
H V + C AF EY+D VT A+AGLN +++ +VL +A+ G +
Sbjct: 450 HV-VKDQQRGDCKGFAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRAMPHGQM 502
>gi|221484193|gb|EEE22489.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 820
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 36/234 (15%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
L+ +R R++ V NLP+ ++ + ++ N L + + V G + + + AF
Sbjct: 275 LSAQSRHARKVYVGNLPVPVTQAEVQQYFNELLTTLLPKKVPGDT-IVHVYVNPSRRFAF 333
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEF--------------------------- 548
+E + E+A+ L DG S+ L ++RP+++
Sbjct: 334 LEHRSIEEANFTLGLDGVSWRNCALSLRRPQDYNPTLAEQQYREERARLGSMTGFAVPPP 393
Query: 549 --VEVASGEAEKSV--ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
+ AE S+ ++ VS V DSPHKIFIGG+ +++ + +++ AFG L+A
Sbjct: 394 SQAATPASPAESSLIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRAL 453
Query: 605 HFEVNEDHEEPC---AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSI 655
H V + C AF EY+D VT A+AGLN +++ +VL +A+ G +
Sbjct: 454 HV-VKDQQRGDCKGFAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRAMPHGQM 506
>gi|307106441|gb|EFN54687.1| hypothetical protein CHLNCDRAFT_53018 [Chlorella variabilis]
Length = 247
Score = 88.2 bits (217), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 37/197 (18%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNF-----LLSSGVQHVHGSLPCIGCVIQREKGQAF 515
RP +R+ V NLP + SE L + +N LL +G+ V ++KG AF
Sbjct: 76 RPAKRVYVGNLPAAVSEAELRQAVNELMGNGDLLFNGMHQV------------QDKGYAF 123
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPH 575
VEF + E+AS A+ DG F S LK+ ++ V +V+DSPH
Sbjct: 124 VEFRSVEEASNAMALDGVKFHDSYLKL------------------VGLEVVKTVVQDSPH 165
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE--DHEEPCAFIEYVDQLVTPKAIAG 633
K+FIGG+ S V E++ FG LKA++ ++ + + AF E++D VT I
Sbjct: 166 KLFIGGLPCDWSEDQVKEMLMPFGQLKAFNLVMDRGTGNSKGYAFAEFMDVHVTDIVIQN 225
Query: 634 LNGLKVGGQVLTAVQAV 650
LNG + LT +A+
Sbjct: 226 LNGKPCNTKFLTVKRAL 242
>gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 139/287 (48%), Gaps = 29/287 (10%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E + + N + + G + I +K AFVE
Sbjct: 27 QATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVE 86
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEK----SVASVDSVSGIV 570
+ E+AS A+ DG F G+ +K++RP ++ + A G ++ ++A+V G
Sbjct: 87 MRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSA 146
Query: 571 K--DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQ 624
+ P +IF+GG+ + V E++ +FGPL+ F++ +D E + AF Y D
Sbjct: 147 GGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG--FDLVKDRETGNSKGYAFCVYQDL 204
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK------- 677
VT A A LNG+K+G + LT +A S + + A ++K
Sbjct: 205 NVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQA--QMQKLMFQVGG 262
Query: 678 ---PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
PT+V+ L V +P+ + E E++++D+R E R+G++ V
Sbjct: 263 GALPTKVVCLTQVVSPDELR--DDEEYEDIVQDMREEGCRYGNLVKV 307
>gi|156070782|gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
Length = 506
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 64/405 (15%)
Query: 367 PRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDP 426
P + R + KT + S ++ + +D+AP + +P + Q +N S P
Sbjct: 57 PHRHRPGSRGKTDRSQSPSKSRRISGFDMAPPTSALLPGATDAAGQVPGTN-----PSIP 111
Query: 427 VTSTTQKPLA---------------GISVSASLAKLNVS---------MDSVQLTQ-SNR 461
+ PLA G+ + + L L M ++TQ + R
Sbjct: 112 GMFSNMFPLASDQVLPQIPSYYTSNGLLIFSFLIHLVCGFFQCGPFPVMPIQEMTQQATR 171
Query: 462 PMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTA 521
RR+ V LP SA+E+++ F ++ + + G I I EK AFVE +
Sbjct: 172 HARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPGDAVIDVYINHEKKFAFVEMRSV 231
Query: 522 EDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIVK--D 572
E+AS A+ DG F G ++++RP ++ + G ++ S +A+V G +
Sbjct: 232 EEASNAMALDGVIFEGEPVRVRRPSDYNASLAATLGPSQPSPNLNLAAVGLTPGSSGGLE 291
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTP 628
P IFIGG+ + + E++ +FGPL+ F + +D E + AF Y D VT
Sbjct: 292 GPDCIFIGGLPDYFTEAQIRELLESFGPLRG--FNLVKDRESGNSKGHAFFVYQDVSVTE 349
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNP----PFHGIPKHALPLLKK--PTEVL 682
A LNG+K+ V+ G+ NP I L LL T+VL
Sbjct: 350 IACGALNGIKIMHDKTLIVRRANQGT---QQLNPEQESVLQQISLQRLMLLPGALATKVL 406
Query: 683 KLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
L L EL + +++LED+R EC +FG++ +V +
Sbjct: 407 CLTEA------VRLDELNDDDDYQDILEDMRTECGKFGALLNVII 445
>gi|242069429|ref|XP_002449991.1| hypothetical protein SORBIDRAFT_05g026783 [Sorghum bicolor]
gi|241935834|gb|EES08979.1| hypothetical protein SORBIDRAFT_05g026783 [Sorghum bicolor]
Length = 249
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RR+ V +LP SA+E+ + F N + G G + E+ A VEF AE+
Sbjct: 27 RRVYVGDLPPSANEQTIGVFFNQVMAVIGGNTAGPGDAVCGICMNHEQRFALVEFRMAEE 86
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV---KDS 573
AS A+ DG F G +K++RP ++ A G + S +A+V +G +
Sbjct: 87 ASNAMALDGILFEGVPVKVRRPADYNLSQAAAMGPTQPSRKLNLAAVGLTAGSAGGGSED 146
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPK 629
P +IF+GG+ S V +++ GPL+ FE+ +D E + AF Y+D T
Sbjct: 147 PDRIFVGGLPYYYSEAQVRDLLECIGPLRG--FELVKDRETGNSKGYAFCVYMDTTATDI 204
Query: 630 AIAGLNGLKVGGQVLTAVQA 649
A A LNG+K+G ++LT +A
Sbjct: 205 ACADLNGIKMGDKILTVRRA 224
>gi|255082091|ref|XP_002508264.1| RNA binding protein [Micromonas sp. RCC299]
gi|226523540|gb|ACO69522.1| RNA binding protein [Micromonas sp. RCC299]
Length = 493
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ-HVHGSLPCIGCVIQREKGQAF 515
Q R RRL V +LP +++AL F NN +++SG G + I EKG AF
Sbjct: 111 AQHTRQSRRLYVGSLPKPVNDEALHAFFNNAMVNSGAAIDPSGGPSVVNTTITHEKGFAF 170
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEF------VEVASGEAE-----KSVASVD 564
+EF EDA +AL DG F+GS L IKRPK++ + G+A K +
Sbjct: 171 IEFRRLEDAESALMFDGIVFNGSKLIIKRPKDYDAARNPIWAMRGQAPPQDEVKLIGEEL 230
Query: 565 SVSGIVKD-------------------------SPHKIFIGGISRTLSSKMVMEIVCAFG 599
+ I+ D PHK++ GG + V +++ + G
Sbjct: 231 PIGTIIVDGKEVKIPLPPPLPSEWPRLPRRTPNGPHKMYCGGFHPLHTDLQVRQVLQSVG 290
Query: 600 PLKAYHFEVNEDHEEPC-AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDN 658
LK++ +E+ AF EY D ++ A L G++V + L + D + +
Sbjct: 291 ELKSFAVMPDENGRPTGHAFFEYKDPRLSAVAETVLTGIRVRNRRLVCRRMNPDAA-PEK 349
Query: 659 SGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARF 715
G + +P A PLL+ + L + E +L+ E+EE + AR+
Sbjct: 350 PGESATYVVPDAAWPLLEPASARLAVYMAIR-EEHDALARREIEEAVHAEAARLARW 405
>gi|401402634|ref|XP_003881297.1| rna recognition motif (RRM)-containing protein,related [Neospora
caninum Liverpool]
gi|325115709|emb|CBZ51264.1| rna recognition motif (RRM)-containing protein,related [Neospora
caninum Liverpool]
Length = 555
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 470 NLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALC 529
NLP+ ++ + ++ N L S Q V G + + + AF+E + E+A+ L
Sbjct: 17 NLPVPVTQGEVQQYFNELLNSLLPQKVPGDT-IVHVYVNPARRFAFLEHRSIEEANFTLG 75
Query: 530 CDGCSFSGSILKIKRPKEF-------------------------------VEVASGEAEK 558
DG S+ L ++RP+++ A E+
Sbjct: 76 LDGVSWRNCALSLRRPQDYNPTLADQQYREERARLGSMTGFAVPPPSQAATPAAPAESSL 135
Query: 559 SVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPC-- 616
++ VS V DSPHKIFIGG+ +++ + +++ AFG L+A H V + C
Sbjct: 136 IAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHV-VKDQQRGDCKG 194
Query: 617 -AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSI 655
AF EY+D VT A+AGLN +++ +VL +A+ G +
Sbjct: 195 FAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRAMPHGQM 234
>gi|76154831|gb|AAX26240.2| SJCHGC03157 protein [Schistosoma japonicum]
Length = 258
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 36/209 (17%)
Query: 540 LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFG 599
LK +RP+ F + ++SV VS +V+DSPHKIF+GG+ L+ V E++ +FG
Sbjct: 4 LKFRRPRVFAPLLGVSEQQSVIVPGVVSTVVQDSPHKIFVGGLPYYLNEDQVKELLLSFG 63
Query: 600 PLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVG----------------- 640
PLK ++ + + + AF EYVD VT A AGLNG+++G
Sbjct: 64 PLKGFNLVKDGSTGLSKGYAFCEYVDSNVTDHACAGLNGMQLGDKKLIVQRASVGAKHTT 123
Query: 641 ---GQVLTAVQAVLDGSIMDNSGNPPF---HGIPKHALPLLKKPTEVLKLKNVFNPEGFS 694
Q L + + +G++ + +G+ G P PTEVL L N+ E
Sbjct: 124 GVLPQCLLQMSGLEEGAVQNTTGSGNLTVRSGGP---------PTEVLCLMNMI--ETSE 172
Query: 695 SLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ E E+++EDVR EC+++G V+S+ +
Sbjct: 173 LEDDEEYEDIVEDVRAECSKYGVVRSLEI 201
>gi|224077136|ref|XP_002305148.1| predicted protein [Populus trichocarpa]
gi|222848112|gb|EEE85659.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 83.2 bits (204), Expect = 7e-13, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 36/237 (15%)
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIVK- 571
T E+AS A+ DG F G ++++RP ++ + G ++ S +A+V V G +
Sbjct: 3 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTISG 62
Query: 572 -DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTP 628
+ P ++F+GG+ + + E++ +FGPL+ + + D + + F Y D VT
Sbjct: 63 AEGPDRVFVGGLPYYFTEIQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 122
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG------------------SIMDNSGNPPFHGIPKH 670
A A LNGLK+G + LT +A G +I + +P
Sbjct: 123 IACAALNGLKMGDKTLTVRRATESGGQSKSEQENILAQAQQHIAIQKMALQAGVMNLPGV 182
Query: 671 ALPLLKK---PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
+PL + P++VL L E + + E EE+LED+R EC +FG++ +NVV
Sbjct: 183 GIPLAESAYTPSKVLCLTEAITMEVLA--DDEEYEEILEDMREECCKFGTL--INVV 235
>gi|432095994|gb|ELK26905.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 171
Score = 82.4 bits (202), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 454 VQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQ 513
V ++ R RRLCV N+P +E+A+ + R+K
Sbjct: 35 VAVSNMTRQARRLCVGNIPFGITEEAM--------------------------VNRDKNF 68
Query: 514 AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDS 573
AF+EF + ++ + A+ DG F G LKI+RP ++ + SV VS +V DS
Sbjct: 69 AFLEFRSVDETTQAMALDGIIFQGQSLKIRRPHDYQPLPDMSENPSVYLPGVVSTVVPDS 128
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF 606
HK+F+GG+ L + V E++ +FGPLKA++
Sbjct: 129 AHKLFMGGLPYYLKDQ-VKELLTSFGPLKAFNL 160
>gi|302846543|ref|XP_002954808.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
gi|300259991|gb|EFJ44214.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
Length = 532
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 21/209 (10%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHV-HGSLPCIGCVI---QREKGQ 513
Q+ R RR+ V LP +A+E+++ F ++ L + G G P I Q +
Sbjct: 190 QATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGGFPFHSTSITSPQSIRSS 249
Query: 514 AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS---------VD 564
EF+ E+ S A+ DG F G ++++RP ++ A+ S + +
Sbjct: 250 ILREFI--EETSNAMALDGIMFEGVSVRVRRPNDYNPAAAASLGPSTPNPNLNLAAIGLS 307
Query: 565 SVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIE 620
+ +G D +IF+GG+ L+ + E++ +FGP+K+ F++ +D E + F+
Sbjct: 308 NAAGGGADQADRIFVGGLPYYLTEEQCRELLGSFGPIKS--FDLVKDRETGNSKGYGFVV 365
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
Y D VT A AGLNGL++G + LT +A
Sbjct: 366 YQDSAVTDIACAGLNGLRMGDRTLTVRRA 394
>gi|82540696|ref|XP_724646.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479360|gb|EAA16211.1| splicing factor-like protein, putative [Plasmodium yoelii yoelii]
Length = 714
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 139/319 (43%), Gaps = 53/319 (16%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLS----SGVQHVHGS---LPCIGC-VIQR 509
+ ++ R+L + NLP ++ ++ ++EF NN + S S ++ G LP + C +
Sbjct: 339 EGDKKQRKLYIGNLPPNSKQEEIVEFFNNTISSIIKGSSLEVKIGDVQLLPVVKCEIFNA 398
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI 569
+ F+EF T + L D S++ L+I RP +++ G+ +V D G+
Sbjct: 399 DSRFCFLEFRTMDITWLCLKLDSMSYNNYCLRINRPHDYMPPPEGDPALTVVFPDIDMGL 458
Query: 570 VK--------------DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHE 613
++ D +K++I + L +M+++ FG LK ++ ++N
Sbjct: 459 LESFKPPKIAPVRSTGDDDNKLYIQNLPHDLKDDQIMDLLGQFGKLKGFNIIKDLNTGLN 518
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS----------IMDNSGNPP 663
+ F EY D T AI LNG G +L +A + + + N+ + P
Sbjct: 519 KGYGFFEYEDSSCTQVAIHALNGFVCGKNILNVKKATFNKNSNNAPNSNNIALANNVDVP 578
Query: 664 FHGIP-----------------KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLE 706
+P + + + +K + V++L N E + + +E+L+
Sbjct: 579 VSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVIQLTNAVFQEDL--IINSQYDEILK 636
Query: 707 DVRLECARFGSVKSVNVVK 725
DV+ E ++G ++S+ + K
Sbjct: 637 DVKEEAEKYGPLQSIVIPK 655
>gi|224125466|ref|XP_002329812.1| predicted protein [Populus trichocarpa]
gi|222870874|gb|EEF08005.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 36/237 (15%)
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIVK- 571
T E+AS A+ DG F G ++++RP ++ + G ++ S +A+V V G +
Sbjct: 3 TVEEASNAMTLDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTISG 62
Query: 572 -DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTP 628
+ P ++F+GG+ + + E++ +FGPL+ + + D + + F Y D VT
Sbjct: 63 AEGPDRVFVGGLPYYFTETQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 122
Query: 629 KAIAGLNGLKVGGQVLTAVQAVLDG------------------SIMDNSGNPPFHGIPKH 670
A A LNGLK+G + LT + G +I + +P
Sbjct: 123 IACAALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLPGV 182
Query: 671 ALPLLK---KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
+PL + P++VL L E + + E EE+LED+R EC +FG++ +NVV
Sbjct: 183 GIPLAESSHSPSKVLCLTEAIAMEVLA--DDEEYEEILEDMREECCKFGTL--INVV 235
>gi|124511860|ref|XP_001349063.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23498831|emb|CAD50908.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1125
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 49/299 (16%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
+ R L V N+P + ++++LN+ LL + C+ I+ + AFVEF
Sbjct: 648 KTARELYVGNIPQHIDIQEIVKYLNSCLLILYNKENENENICLKACIRGDTHYAFVEFRN 707
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVDSV---SGIVKDSPHK 576
+D S + +G +F G+ L+I RPK F +E S + ++ ++D+ G++
Sbjct: 708 IQDTSNCMLLNGINFYGNNLRIGRPKTFPIEYHSLIPQATIPAIDNYYLSQGLIGLRSFI 767
Query: 577 IF-----------------------IGGISRTLSSKMVMEIVCAFGPLKAYHFEV-NEDH 612
IF + IS+ + + E++ AFG +K + F +E
Sbjct: 768 IFCKNEEKMKNDGLPVNMIKLQKLCVSNISKNNDTSKIKELLEAFGEIKNFEFFYGDETS 827
Query: 613 EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH-- 670
+ + +EYV+ T AI L T+ + + I+++ P + I K+
Sbjct: 828 DTYISLVEYVN---TENAIQAHKILNQN----TSYKIQFEHEIIND---PHINNIIKNKY 877
Query: 671 -----ALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
++ L+ PT+V+ L + E S SE + +++ED+++EC ++G K++ VV
Sbjct: 878 MKTENSILSLQVPTKVIVLNKIATFEELSDSSEYK--DIVEDIKIECDKYG--KTLEVV 932
>gi|167515386|ref|XP_001742034.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
gi|163778658|gb|EDQ92272.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
Length = 431
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 155/370 (41%), Gaps = 63/370 (17%)
Query: 385 SPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASL 444
+PE A WDV P ++P V+ D V + AG+ +SA L
Sbjct: 36 APEPSEA-WDVPPPGYENMPPKVY---------------KDYVCTY----FAGLPISAEL 75
Query: 445 AKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
L SM + LT R RRL V +P A++ L EF N L G+ G+ P +
Sbjct: 76 PGLRSSMPN-PLT---RGARRLYVGGIPNGANDMELAEFFNMQLTQQGLTIGPGA-PVVS 130
Query: 505 CVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVD 564
I EK AF+E + E+A++ + D F G+ L+I+RPK++ A G +E V VD
Sbjct: 131 AQINEEKSFAFLELRSPEEATSCIAFDNIMFMGNQLRIRRPKDYQAPAGGTSE--VPKVD 188
Query: 565 SVSGIVKDSPH---------------KIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--E 607
P ++ + I + + + E+ FG + + E
Sbjct: 189 MPMPRPMPMPTPMPMPTPMPMLVPSGRLNVTNIPLAMDEEQLRELFSVFGTIASLELRKE 248
Query: 608 VNEDHEEPCAFIEY----VDQLVTPKAIAGLNGLKVGGQVLTAVQAV-------LDGSIM 656
D A +E+ D L K AGL + GQ L Q V L S +
Sbjct: 249 PETDKFAGDAIVEFDTRAPDFLNQVK--AGLEDIDFEGQKLKVEQVVRWWSYCGLRASYI 306
Query: 657 DNS---GNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECA 713
S +P G A+P ++ TEVL L N+ E + E ++++ED+R EC
Sbjct: 307 APSLVNASPFVGGAAAPAVPDVEA-TEVLVLMNMVTKEELQ--DDEEYKDIMEDIREECG 363
Query: 714 RFGSVKSVNV 723
+FG++ + +
Sbjct: 364 KFGNITDLKI 373
>gi|296088196|emb|CBI35712.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP A+E+ + F + + + G + I EK AFVE
Sbjct: 143 QATRHARRVYVGGLPPLANEQTIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 202
Query: 518 FLTAEDASAALCCDGCSFSGSI-LKIKRPKEF---VEVASGEAEKS----VASVDSVSGI 569
+ E+AS A+ DG F + L P ++ + A G ++ S +A+V + G+
Sbjct: 203 MRSVEEASNAMALDGIMFEACLTLIFSLPTDYNPSLAAALGPSQPSPHLNLAAVGLMPGV 262
Query: 570 V--KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQL 625
+ + P +IF+GG+ + + + E++ +FGPL+ + + D + + F Y D
Sbjct: 263 IGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPA 322
Query: 626 VTPKAIAGLNGLKVGGQVLTA 646
VT A A LNGLK+G + LT
Sbjct: 323 VTDIACAALNGLKMGDKTLTV 343
>gi|403367221|gb|EJY83425.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 543
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 137/307 (44%), Gaps = 56/307 (18%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
R+L ++NLP +E+ +M + ++SS + + P + + ++ G +EF ++
Sbjct: 189 RKLVIQNLPPDITEEDVMNYFFT-VISSFSKVEYQKNPIMSVIKYKDLGFVTLEFRKRDE 247
Query: 524 ASAALCCDGCSF-SGSILKIKRPKEFVEVASGEAEKSVASVDSVS---GI---------- 569
L DG + +G ++I R K F++ + + +K +++++ G+
Sbjct: 248 GEICLTLDGTEYRTGYKMRIMRVKRFIDDWNADIDKGKNPIEAMTRGKGVSLFSTGNNQF 307
Query: 570 ---------------VKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF---EVNED 611
V++ +++++G I ++ + V ++ +FG LKA++ +N D
Sbjct: 308 KEPAKPDQKAGKKEKVEEVDNRLYMGNIPNSMKDEDVKKMCESFGRLKAFNLVKDPMNPD 367
Query: 612 HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL-------------TAVQAVLDGSIMDN 658
+ AF EYVD+ KAI LNGL + L T +Q + ++ D
Sbjct: 368 LNKGYAFFEYVDERSIDKAIKSLNGLDFKEKKLKVQKASAHQKTSQTQIQIGMYKNVPDE 427
Query: 659 SGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
P IP A+ P+ V++ N+ + E E E+ V +D+ EC +G +
Sbjct: 428 KRLP----IPLFAMT----PSRVVQFINMISVEDL--FEEDEIIHVKDDLLQECKNYGEI 477
Query: 719 KSVNVVK 725
S+ + K
Sbjct: 478 ISIEIPK 484
>gi|325179530|emb|CCA13927.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 833
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 158/382 (41%), Gaps = 80/382 (20%)
Query: 410 SNQAASSNAHEMVSSDPVTSTTQ--KPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLC 467
+N + + H VS D S TQ + +S+ +AK+ S ++ + +P R L
Sbjct: 416 ANSSPEPHEHPPVSGDGTPSITQLMQQYPTLSLQDIIAKMQASNVTMAAAVAMKPARELY 475
Query: 468 VENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAA 527
V NLP + + L EFL + G+ G+ P + I + AF E + E+ + A
Sbjct: 476 VGNLPATITGPQLQEFLGTIIQQVGLSTQPGN-PILSVWISTDGHFAFCEMRSVEECNLA 534
Query: 528 LCCDGCSFSGSILKIKRPKEF------VEVASGEAEKSVASV------------------ 563
L + G LK RP+ F + + S + ++ ++
Sbjct: 535 LLLNQLPLLGQPLKFGRPRSFMGPPQPMPIVSARTQTALVNLGCTPNPVWFASPDVTSFG 594
Query: 564 ----------------------------DSVSGIVKD-SPHKIFIGGISRTLSSKMVMEI 594
DS++ + D + ++ + I L+ + V E+
Sbjct: 595 SDPMGFGNGLNGFLSSSSSSLMSATALADSLASLPSDPNATQLLMSNIPGVLAEEQVKEL 654
Query: 595 VCAFGPLKAYHFEVNED----HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAV 650
V FG L+ F++ +D AF EY + VT +A+ GL+GL +GG L+ +A
Sbjct: 655 VQPFGELR--FFKLIKDPITGQSTGTAFFEYQENQVTTEALNGLDGLDIGGVKLSVRRA- 711
Query: 651 LDGSIMDNSGNPPFHGIPKHALPLL----KKPTEVLKLKNVFNPEGFSSLSELEVEEVLE 706
P P+ A+ + ++P VL++ N+ + + ++ E ++ E
Sbjct: 712 -----------PDATKYPQIAVLMPGAAGEEPGPVLRMANMVSEDELK--NDEEFADLKE 758
Query: 707 DVRLECARFGSVKSVNVVKYGD 728
DV EC RFG++ ++++ + D
Sbjct: 759 DVEEECKRFGTIIALDIPRSQD 780
>gi|221059061|ref|XP_002260176.1| U2 snRNP auxiliary factor [Plasmodium knowlesi strain H]
gi|193810249|emb|CAQ41443.1| U2 snRNP auxiliary factor, putative [Plasmodium knowlesi strain H]
Length = 865
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 64/326 (19%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLS----SGVQHVHGS---LPCIGC-VIQ 508
+ ++ R+L + N+P ++ ++ L++F NN L S S ++ G +P + C +
Sbjct: 488 VEGDKKQRKLYIGNIPPNSKQEELIDFFNNTLGSIIKDSSLEIKIGDIVLMPILKCEIFN 547
Query: 509 REKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVD---S 565
E F+EF + E L D +F+ L+I RP +FV G+ +V D
Sbjct: 548 VESRFCFLEFRSLEITWLCLRLDAITFNNYALRIARPHDFVPPPGGDPALTVVFTDIQHE 607
Query: 566 VSGIVK-----------DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH-- 612
V +VK D +K++I + L + +++ FG LK F V +D
Sbjct: 608 VFEMVKPIKIAPVRSTGDDDNKLYIQNLPHDLGDVQIRDLLQQFGKLKG--FNVIKDQST 665
Query: 613 --EEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS---------IMDNSGN 661
+ F EY D TP A+ LNG G +L+ +A S I SG+
Sbjct: 666 GLNKGYGFFEYEDSNCTPIAMHALNGFVCGQNILSVKKATFGKSQNSTQNANTISLGSGS 725
Query: 662 PPFHGIPKHALP----------------------LLKKPTEVLKLKNVFNPEGFSSLSEL 699
+P LP + +K + V++L N E + +
Sbjct: 726 VD---LPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDL--IIDS 780
Query: 700 EVEEVLEDVRLECARFGSVKSVNVVK 725
+ EE+L D++ E ++G ++++ + K
Sbjct: 781 QYEEILRDIKEEAEKYGPLQNIVIPK 806
>gi|320031290|gb|EFW13263.1| splicing factor u2af large subunit [Coccidioides posadasii str.
Silveira]
Length = 545
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 112/272 (41%), Gaps = 47/272 (17%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R +RL V NL S SE ++ +F N L +G+ V G PC+ + + A +EF
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFN--LQLNGLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 520 TAEDASAALCCDGCSF-----------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSG 568
TA DA+ AL DG S S L I+RPK+++ E + S VS
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDYI--VPSETDDSNRQEGVVSN 331
Query: 569 IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLV 626
V DSP+KI + I + + V ++ +FG LK++ + D AF EYVD
Sbjct: 332 EVPDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFILVKDSGTDESRGIAFCEYVDPSS 391
Query: 627 TPKAIAGLNGLKVGGQVLTAVQAVLD-----GSIMDNSGNPPFHGIPKH------ALPLL 675
T A+ GLNG+++G + L +A + G M + F L LL
Sbjct: 392 TNIAVEGLNGMELGDKRLKVTRASIGATQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLL 451
Query: 676 KKPT-------------------EVLKLKNVF 688
T E K V
Sbjct: 452 NMVTAEELMDNDDYEEICDDVRDECSKYGQVL 483
>gi|303323229|ref|XP_003071606.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240111308|gb|EER29461.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 545
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
+R +RL V NL S SE ++ +F N L +G+ V G PC+ + + A +EF
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFN--LQLNGLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 520 TAEDASAALCCDGCSF-----------SGSILKIKRPKEFVEVASGEAEKSVASVDSVSG 568
TA DA+ AL DG S S L I+RPK+++ E + S VS
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDYI--VPSETDDSNRQEGVVSN 331
Query: 569 IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLV 626
V DSP KI + I + + V ++ +FG LK++ + D AF EYVD
Sbjct: 332 EVPDSPSKICVTNIPPFIQEEQVTMLLVSFGELKSFILVKDSGTDESRGIAFCEYVDPSS 391
Query: 627 TPKAIAGLNGLKVGGQVLTAVQAVLD-----GSIMDNSGNPPFHGIPKH------ALPLL 675
T A+ GLNG+++G + L +A + G M + F L LL
Sbjct: 392 TNIAVEGLNGMELGDKRLKVTRASIGATQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLL 451
Query: 676 KKPT-------------------EVLKLKNVF 688
T E K V
Sbjct: 452 NMVTAEELMDNDDYEEICDDVRDECSKYGQVL 483
>gi|320590609|gb|EFX03052.1| splicing factor u2af large subunit [Grosmannia clavigera kw1407]
Length = 420
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 515 FVEFLTAEDASAALCCDGCSFSG--------SILKIKRPKEFVEVASGEAEKSVASVDSV 566
VEF DA+ AL +G S S L I+RPK+++ + SV V
Sbjct: 1 MVEFKEPIDATVALALNGISMEAEDASGSGQSGLSIQRPKDYI--VPAVVDYSVYHPGVV 58
Query: 567 SGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQ 624
S +V D+P KI I I LS + V E++ +FG L+A+ + EE AF EY +
Sbjct: 59 SNVVIDTPFKIAITNIPSYLSDEQVTELLVSFGELRAFVLLKDRSTEESRGVAFCEYTEP 118
Query: 625 LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKL 684
T AI GLNG+ +G + L VQ G S + + A + ++ ++V ++
Sbjct: 119 QSTDVAIQGLNGMDLGDRKLR-VQKASIGITQVTSVEMGVNAMSLLAGTISQEASDVSRV 177
Query: 685 KNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNV 723
+ N + EL + E++ EDV ECA+FG V + V
Sbjct: 178 VQLLN---MVTAEELVNNDDYEDICEDVTEECAKFGPVMGLKV 217
>gi|70946422|ref|XP_742927.1| U2 snRNP auxiliary factor [Plasmodium chabaudi chabaudi]
gi|56522174|emb|CAH84932.1| U2 snRNP auxiliary factor, putative [Plasmodium chabaudi chabaudi]
Length = 561
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 175/421 (41%), Gaps = 77/421 (18%)
Query: 366 SPRKRRTEAAAKTPSPINR----------SPEKKSAKWDVAPVETYSVPSNVHTSNQAAS 415
S R+R+ A K ++ P++K +KWD +V ++ +N
Sbjct: 98 STRERKKNARDKNDISMSEEDSKKENKEIKPKRKKSKWD-------TVDESLLANNMLID 150
Query: 416 SNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSA 475
SN V S L G + + + +L + ++ R+L + NLP ++
Sbjct: 151 SNNLSGVLQYQRLSLNGNLLPGNKMP------QLGRNPYEL-EGDKKQRKLYIGNLPPNS 203
Query: 476 SEKALMEFLNNFLLS----SGVQHVHGS---LPCIGC-VIQREKGQAFVEFLTAEDASAA 527
++ ++EF NN L S S ++ G LP + C + + F+EF T + +
Sbjct: 204 KQEEIVEFFNNTLSSIIKGSSLEVKIGDVQLLPVVKCEIFNPDSRFCFLEFRTMDITWLS 263
Query: 528 LCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVK--------------DS 573
L D S++ L+I RP +++ G+ +V D G+++ D
Sbjct: 264 LKLDSMSYNNYCLRINRPHDYMPPPEGDPALTVVFPDIDMGLLESFKPPKIAPVRSTGDD 323
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAI 631
+K++I + L +M+++ FG LK ++ ++N + F EY D T AI
Sbjct: 324 DNKLYIQNLPHDLKDDQIMDLLGQFGKLKGFNIIKDLNTGLNKGYGFFEYEDSSCTQVAI 383
Query: 632 AGLNGLKVGGQVLTAVQAVLDGSI----------MDNSGNPPFHGIP------------- 668
LNG G +L +A + + + N+ + P +P
Sbjct: 384 HALNGFVCGKNILNVKKATFNKNPNNIPNPNNIALANNVDVPVSLLPNSISQKILSNSII 443
Query: 669 ----KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
+ + + +K + V++L N E + + EE+L+DV+ E ++G+++S+ +
Sbjct: 444 GLQIQASRKIGEKSSRVIQLTNAVFQEDL--IINSQYEEILKDVKEEAEKYGTLQSIVIP 501
Query: 725 K 725
K
Sbjct: 502 K 502
>gi|146170296|ref|XP_001470832.1| hypothetical protein TTHERM_00484731 [Tetrahymena thermophila]
gi|146145092|gb|EDK31651.1| hypothetical protein TTHERM_00484731 [Tetrahymena thermophila
SB210]
Length = 471
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLP----CIGCVIQREKGQAFV 516
R RRL + N+P + +++ L E+L L ++G + SLP + C I + AF
Sbjct: 31 RHARRLYIGNIPETINQEYLSEWLYRSLEAAG--GLQPSLPSENPIVKCEIDPKGRFAFT 88
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEV--ASGEAEKSVASVDS--------- 565
E + E+ +A L DG L+I+RP E+ + G+ E ++ ++
Sbjct: 89 ELRSIEETTALLQLDGIILWHRQLRIRRPTEYEKFPKVQGQFEANIPKLNFDLFKTVGIV 148
Query: 566 -VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCA--FGPLKAYHF--EVNEDHEEPCAFIE 620
+ IV D P+KIF+ + + M+++ + G +KA+H + + + AF E
Sbjct: 149 IIPTIVDDGPNKIFLANLPTKMDELMILDELKLRDMGEIKAFHLVKDNQTNQSKGYAFFE 208
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG 653
+ D +T I L+G++ G+ LT ++ + G
Sbjct: 209 FKDPSLTDNCIETLHGMQYAGRTLTCKRSQIGG 241
>gi|255088499|ref|XP_002506172.1| predicted protein [Micromonas sp. RCC299]
gi|226521443|gb|ACO67430.1| predicted protein [Micromonas sp. RCC299]
Length = 628
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 168/421 (39%), Gaps = 45/421 (10%)
Query: 336 SDIDSSR-VTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP--EKKSAK 392
S+ D +R T L D L G T+ + + P+ N P + A
Sbjct: 124 SNDDKTREETRAKLLATVTALDAKVGDLPG-------TKHSHQAPTDPNNPPLVDDGKAG 176
Query: 393 WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMD 452
+ V+ ++ ++ A D + ++ ++A++ + +
Sbjct: 177 YIVSADGSHMTFFGGRGGSEGAGFGLRGTAGGDAADAVREEAKGKRGMNAAMVDALLLHN 236
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFL--LSSGVQHVHGSLPCIGCVIQR- 509
V+ +P RR+ + N+ + L + LS H L G V +R
Sbjct: 237 KVRWRDDTKPARRVHIGNVNAGVKAEEFARVLETRIRTLSPEAVPWHYPLDKRGRVDERR 296
Query: 510 -------------EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF-----VEV 551
+KG F+E ED A L +G +G + + +RPK++ V
Sbjct: 297 APGTRVIEHLYLNDKGFGFLETTALEDVPAILALNGVRVNGGVTRFRRPKDYDPDNNPLV 356
Query: 552 ASGEAEKSVASVDS--VSGIVKDSPHKIFIGGI-SRTLSSKMVMEIVCAFGPLKAYHFEV 608
G V + +S V DSP K+F+GG+ R L+ ++EIV +FG L A+ E
Sbjct: 357 RDGSYRDVFQRVFTAVLSDEVVDSPTKVFVGGVEPRALTKLDLLEIVSSFGALTAFRCET 416
Query: 609 NEDHEEPC---AFIEYVD-QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF 664
D C A++EY + + V KA+AGL+G ++ G+ + A A G +
Sbjct: 417 --DGAGLCRGFAWMEYAEGESVAAKAVAGLSGYQLRGKPIAAALATPRAEAARTRGERRY 474
Query: 665 -HGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ +P PLLK P VL NV G S + ED EC FG+V S +V
Sbjct: 475 TYEVPPEVEPLLKPPQRVLAFSNVLVRGG----SREDRAAATEDTLAECDGFGNVLSTHV 530
Query: 724 V 724
V
Sbjct: 531 V 531
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 923 CVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK 967
C+FVE+ R E + +AAH+ HRR +D R+V + PL Y+ F K
Sbjct: 550 CLFVEFARVETATIAAHAFHRREYDGRVVECRFFPLTEYQRMFGK 594
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 141/355 (39%), Gaps = 82/355 (23%)
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+S+ +AK+ S ++ + +P R L V NLP + + L EFL+ + G+
Sbjct: 251 MSLQDIIAKMQASNVTMAAAVAQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQP 310
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKR-------PKEFVE 550
G+ P I I + AF E + E+ + AL + S G LK R P+ +
Sbjct: 311 GN-PIINTWISTDGHFAFCEMRSVEECNLALLLNQLSLLGQPLKFGRPRSFMGPPQPMPQ 369
Query: 551 VAS----------------GEAEKSVASVD-SVSGIVKDS-------------------- 573
+++ A+ +V S+D + + V DS
Sbjct: 370 ISARTQTALTNLGCTPNPAWFAQPAVPSLDEAAAAPVGDSSTLAGATAAAVAAAQPAVPA 429
Query: 574 -----------PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
H++ + I L+ V E+V FG LK++ + A E
Sbjct: 430 VASTTVDASLSAHRLIMSNIPVVLTEDQVKELVEPFGALKSFTLVKDTATGASMGSALFE 489
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQ---AVLDGSIMDNSGNPPFHGIPKHALPLLKK 677
Y D VT +A+ GLNGL +GG +L +VQ A P F +
Sbjct: 490 YEDDSVTAQAVEGLNGLSIGG-ILLSVQCQPASGAALPAAPGATPNFE----------DQ 538
Query: 678 PTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNVVKYGD 728
P+ VLK+ N+ S+ EL E ++ EDV EC RFG+V + + + D
Sbjct: 539 PSAVLKMANMV------SIDELRDDDEYADLAEDVEEECKRFGNVTGLEIPRPKD 587
>gi|50552688|ref|XP_503754.1| YALI0E09889p [Yarrowia lipolytica]
gi|49649623|emb|CAG79345.1| YALI0E09889p [Yarrowia lipolytica CLIB122]
Length = 601
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 34/284 (11%)
Query: 460 NRPMRRLCVENLPLSASEK-ALMEFLNNFL-----------LSSGVQHVHGSLPCIGCVI 507
+R RRL + +P + A+ F +F+ + GV + H LP
Sbjct: 262 SRVARRLILSGIPADQIDTVAIKSFFTDFIEGLELQGSKERIVDGV-YKHPRLP------ 314
Query: 508 QREKGQAFVEFLTAEDASAALCCDG--CSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
+ VEF +AE A+ AL G ++SG + I+RP ++ +E S S+D
Sbjct: 315 -----EVLVEFFSAEMATLALALSGLGINYSGPPISIRRPSNYICPTPERSEVSRRSLDE 369
Query: 566 ---VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIE 620
V+ +V+DS KI + I + V ++ +FG L A+ ++ A ++
Sbjct: 370 EKEVASVVEDSNTKIIVWDIPFNVEEDQVRQLTASFGELSAFQLIRQLPSRESAGIALVD 429
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP-T 679
Y D V A++GL+G +GG+ L + A + + S N GI + +P +
Sbjct: 430 YKDPEVVKDAVSGLSGQVIGGKNLKVMLACEGPTQLSCSSNNGLKGIVTVMNDVKSRPES 489
Query: 680 EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
V+ L N+ + L ++ E+ E V EC ++G + V +
Sbjct: 490 SVIVLFNLVTLDEL--LDDVAYREITEQVESECLKYGGGEEVQI 531
>gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis]
Length = 600
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 178/464 (38%), Gaps = 146/464 (31%)
Query: 374 AAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQK 433
A + P P R P + W P +P+ + A S+ V + T
Sbjct: 112 APPRLPGPAPRLPS--VSLW---PPAAGQIPTMALLATAA---------SAGVVAAPTPV 157
Query: 434 PLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV 493
P+AG ++ +L V LT++ +RRLC + ++++ EF N + +G+
Sbjct: 158 PVAGSQMTRQARRLYVGNIPFGLTEA---LRRLC-------SPQESMAEFFNAQMRLAGL 207
Query: 494 QHVHGSLPCIGCVIQREKGQAFVEF-------------LTAEDASAALCCDGCSFSGSIL 540
S P + I ++K AF+E A D ++ G +G L
Sbjct: 208 SQAP-SNPVLAVQINQDKNFAFLEVRPGFSAAAALPAAAAAADVCVSVPLGGRDHAGHGL 266
Query: 541 K----------------------------IKRPKEFVEVASGEAEKSVASVDSVSGIVKD 572
+ + RP+ F+ A+ A + VS +V D
Sbjct: 267 RRHRVPGSGSEDPTASRLPASARHLGAAGVPRPR-FLRAAARHAARVGRRPGVVSTVVPD 325
Query: 573 SPHKIFIG--------------GISRTLSSKM---------------------------- 590
SPHK+FIG G+ +LS ++
Sbjct: 326 SPHKLFIGGLPNYLNDDQVAAAGLPPSLSGRLSQSGRKRDLGARKVVSWPLSAPHAGFSL 385
Query: 591 ---------------------VMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVT 627
V E++ +FGPLKA++ + + AF EYVD T
Sbjct: 386 QAQSQQLRSVNVHPGVCAGVKVKELLTSFGPLKAFNLVKDGATSLSKGYAFCEYVDVGAT 445
Query: 628 PKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHAL--PLLKK------PT 679
+A+AGLNG+++G + L +A S+ + NP L P L++ PT
Sbjct: 446 DQAVAGLNGMQLGDKKLIVQRA----SVGAKNANPSAAAEAPVTLQVPGLQRLQTSGVPT 501
Query: 680 EVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
EVL L N+ PE + + + EE+LEDVR EC ++G V+S+ +
Sbjct: 502 EVLCLLNMVVPEEL--VDDEDYEEILEDVREECCKYGGVRSIEI 543
>gi|389585165|dbj|GAB67896.1| U2 snRNP auxiliary factor [Plasmodium cynomolgi strain B]
Length = 894
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 47/271 (17%)
Query: 500 LPCIGC-VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEK 558
+P + C + E F+EF + E L D SF+ L+I RP +FV G+
Sbjct: 567 MPILKCEIFNVESRFCFLEFRSLEITWLCLRLDAISFNNYCLRIARPHDFVPPPGGDPAL 626
Query: 559 SVASVD---SVSGIVK-----------DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAY 604
+V D V +VK D +K++I + L + +++ FG LK +
Sbjct: 627 TVVFTDINHEVFEMVKPVKIAPVRSTGDDDNKLYIQNLPHDLRDDQIRDLLQQFGKLKGF 686
Query: 605 HF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVL----------- 651
+ ++N + F EY D TP A+ LNG G +L +A
Sbjct: 687 NVIKDLNTGLNKGYGFFEYEDSNCTPIAMHALNGFVCGQNILNVKKATFGKSQNSTQNAN 746
Query: 652 DGSIMDNSGNPPFHGIP-----------------KHALPLLKKPTEVLKLKNVFNPEGFS 694
S+ S + P +P + + + +K + V++L N E
Sbjct: 747 TTSLATGSVDLPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDL- 805
Query: 695 SLSELEVEEVLEDVRLECARFGSVKSVNVVK 725
L + + EE+L+D++ E ++G ++++ + K
Sbjct: 806 -LIDSQYEEILKDIKEEAEKYGPLQNIVIPK 835
>gi|124810295|ref|XP_001348830.1| U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
gi|23497731|gb|AAN37269.1|AE014827_12 U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
Length = 833
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/507 (19%), Positives = 202/507 (39%), Gaps = 108/507 (21%)
Query: 284 LKRRRSRSREREDRNRRSLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRV 343
L RRRSR ++ DRN+ S HS ISS +H + R
Sbjct: 311 LDRRRSRYKDSRDRNKFSY----------------------HSRSISSDEEHYSKNKKRT 348
Query: 344 TGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEK--KSAKWDVAPVETY 401
+ + S+S + R R++ ++ T N S +K K +KWD
Sbjct: 349 KRRKSRHNIDKDSYSSSSNSTHRRRNRKSSSSNNTRKDDNNSIQKKRKKSKWD------- 401
Query: 402 SVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLT---- 457
T ++ +N S V+ QK + ++V+ +L N + +
Sbjct: 402 -------TVDECLLNNNLLNNS---VSGIFQK--SSLTVTGNLIAQNNKITDLSRNPYEQ 449
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLS----SGVQHVHGS---LPCIGC-VIQR 509
+++ R+L + N+P ++ ++ +++F NN +L+ S + G +P I C +
Sbjct: 450 DTDKKQRKLYIGNIPPNSKQEDVVDFFNNSILAVIKDSSLDVKIGDVQLMPVIKCEIFNS 509
Query: 510 EKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGI 569
+ F+EF T + L D ++ L+I RP +++ G+ + D +
Sbjct: 510 DSRFCFLEFRTVQITWLCLKLDSIPYNNYCLRIGRPHDYIPPPEGDPAFTTVFTDINMDV 569
Query: 570 VK--------------DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHE 613
+ D ++++I + L + + +++ FG LKA++ ++N
Sbjct: 570 FEKLRPSKPVNVKTSSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIKDLNTGLN 629
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS------------------I 655
+ F EY D T AI LNG G +L +A +
Sbjct: 630 KGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNKQPTTITTNNNMNNQNPNFIA 689
Query: 656 MDNSGNPPFHGIP-----------------KHALPLLKKPTEVLKLKNVFNPEGFSSLSE 698
+ N+ + P +P + + + +K ++V++L N E + +
Sbjct: 690 LPNNSDVPVTLLPSSISQKILSNSIIGLQVQASRKIGEKSSKVVQLTNAVFQEDL--IVD 747
Query: 699 LEVEEVLEDVRLECARFGSVKSVNVVK 725
+ EE+L++V+ E ++G+++++ + K
Sbjct: 748 SQYEEILKEVKEEAEKYGTLQNIVIPK 774
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 53/318 (16%)
Query: 453 SVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSL----------PC 502
+V ++S+R RRL + N+P +E + F N LL+ Q + L P
Sbjct: 154 AVTHSESDRIARRLFISNIPPGTTEADICGFFNGALLAVNAQTGYTDLSLASDKPQLLPV 213
Query: 503 IGCV-IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVA 561
C +Q F++ + E L DG +F+ + LK+ RPKE+V+ G+ K+V
Sbjct: 214 ERCEGLQENSRHCFLDLRSHEWVVLCLKLDGITFNNNSLKVLRPKEYVQPPGGDPAKTVH 273
Query: 562 SVDSVSG-------IVKDSPH-----KIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN 609
+ G + +P K++I + + V +++ FG L+ + N
Sbjct: 274 IPELERGTKPQQNEVRATAPPRSADCKLYIQNLPPEMGEDQVRDLLEQFGKLRVLNLIKN 333
Query: 610 ED--HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGI 667
F EY D VT +AI LNG G VL+ ++ ++ H
Sbjct: 334 RQTGKHRGYGFFEYEDPEVTDQAIEALNGFVCGASVLSVQRSNFMPDLLPTKQ----HTT 389
Query: 668 PKHALP----------------------LLKKPTEVLKLKNVFNPEGFSSLSELEVEEVL 705
ALP + +KP+ V++L N PE +++ E +
Sbjct: 390 EVTALPSSTSYAVLSDPVVAIQVRAGRTIGEKPSRVVQLLNTIYPEDI--MTDSSHEAAV 447
Query: 706 EDVRLECARFGSVKSVNV 723
+D R E ++G ++ V +
Sbjct: 448 KDTRSEAEKYGPLEEVLI 465
>gi|432090458|gb|ELK23883.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 423
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVD 623
VS +V DS HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD
Sbjct: 253 VSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVD 312
Query: 624 QLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKP 678
VT +AIAGLNG+++G + L +A + + N +P LPL P
Sbjct: 313 INVTDQAIAGLNGMQLGDKKLLVQRASV------GAKNATLVSLPARHLPLAWGP 361
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 480 LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI 539
+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ +G
Sbjct: 1 MMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAM-------AGQS 52
Query: 540 LKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
LKI+RP ++ + SV VS +V DS HK+FIGG
Sbjct: 53 LKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGG 94
>gi|156085070|ref|XP_001610018.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
gi|154797270|gb|EDO06450.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
Length = 383
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 49/286 (17%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLL----SSG--VQHVHGSLPCIGCVIQREKGQAFVE 517
RRL + NLP + KAL+EFL+ L SG VQ H S I ++G F+E
Sbjct: 59 RRLYIGNLPSGTTYKALVEFLSAALRLPNDDSGQTVQVPHISKTEI---FNEDQGYCFLE 115
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKI 577
F T E A A DG +F G +LKI+RP ++ +S E K+
Sbjct: 116 FSTPELADACFKLDGINFKGKLLKIRRPIDYGTTSSSEDT------------------KV 157
Query: 578 FIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLN 635
F+ I T+S V E++ G +K+ + ++ + F E+ D A+ LN
Sbjct: 158 FVQNIPPTMSEAEVKELLEKHGKIKSSNLVKDLKTGQNKGYGFFEFDDSRAAKMAVCHLN 217
Query: 636 GLKVGGQVLTAVQAVLD-----GSIMDNSGNPPFHGIPKHAL--PLL-----------KK 677
G +G VL+ A G + D + + + L PLL K
Sbjct: 218 GHIIGKNVLSVKHAAFSYFAAGGKLTDCKATNLPNSVTQSILSNPLLGLQMQSGRRIGSK 277
Query: 678 PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
P+ +++L N+ E + + EV + + E ++G ++ + +
Sbjct: 278 PSRIVQLINIVFHEDL--IQDKRYHEVKDAIMEEAKKYGHLEDIVI 321
>gi|358417046|ref|XP_001256277.3| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Bos taurus]
Length = 330
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
SP + +K WDV P + + + QAA Q P +
Sbjct: 79 SPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAG----------------QIPATALL 122
Query: 440 VSASLAKLNVSMDSVQL--TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ + L V+ V + +Q R RRL V N+P +E+A+M+F N + G+
Sbjct: 123 PTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAP 182
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 183 GN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 232
>gi|237839189|ref|XP_002368892.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
gi|211966556|gb|EEB01752.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
Length = 553
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS----------LPCIGCV 506
T+ +R +RL V NLP +++ ++ F N LL+ Q LP C
Sbjct: 181 TEFDRKQKRLYVGNLPPGSTQPDVVGFFNGALLAVNAQTGFVKEDEATAGEQLLPVERCE 240
Query: 507 IQREKGQ-AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA--EKSVASV 563
+ E + F+E + A + DG +++G L++ RP ++V G+ + + +
Sbjct: 241 VFNESSRFCFIELRNEQYAILCVKLDGITYNGYSLRVGRPHDYVPPPGGDPAHQAYIPLL 300
Query: 564 DSVSGIVKDSP------------HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVN 609
D + ++ +KI+I + + + V +++ FG L+ + V
Sbjct: 301 DDAKKVKREEKREKPSRPETGPNNKIYIQNLPPEMGEEQVRDLLEQFGTLRVLNLIRNVQ 360
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN-------- 661
+ F EY D VT +AI LNG G +L+ +A GS++ N
Sbjct: 361 TGQHKGYGFFEYEDPEVTDQAILALNGFVCGANMLSVQRANFSGSVVTRETNRTMAVTSL 420
Query: 662 -----------PPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRL 710
P + A + ++P++V++L N E + E E + +D++
Sbjct: 421 PNSMTQKLLSDPLVAVQVQAARKIGERPSKVVQLLNCVYQEDL--IDPKEYEAICDDIKQ 478
Query: 711 ECARFGSVKSVNVVK 725
E + G+++ V V K
Sbjct: 479 EAEKHGALEEVLVPK 493
>gi|221483471|gb|EEE21790.1| U2 snRNP auxiliary factor, putative [Toxoplasma gondii GT1]
gi|221507941|gb|EEE33528.1| U2 snRNP splicing factor, putative [Toxoplasma gondii VEG]
Length = 553
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 457 TQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS----------LPCIGCV 506
T+ +R +RL V NLP +++ ++ F N LL+ Q LP C
Sbjct: 181 TEFDRKQKRLYVGNLPPGSTQPDVVGFFNGALLAVNAQTGFVKEDEATAGEQLLPVERCE 240
Query: 507 IQREKGQ-AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEA--EKSVASV 563
+ E + F+E + A + DG +++G L++ RP ++V G+ + + +
Sbjct: 241 VFNESSRFCFIELRNEQYAILCVKLDGITYNGYSLRVGRPHDYVPPPGGDPAHQAYIPLL 300
Query: 564 DSVSGIVKDSP------------HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVN 609
D + ++ +KI+I + + + V +++ FG L+ + V
Sbjct: 301 DDAKKVKREEKREKPSRPETGPDNKIYIQNLPPEMGEEQVRDLLEQFGTLRVLNLIRNVQ 360
Query: 610 EDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGN-------- 661
+ F EY D VT +AI LNG G +L+ +A GS++ N
Sbjct: 361 TGQHKGYGFFEYEDPEVTDQAILALNGFVCGANMLSVQRANFSGSVVTRETNRTMAVTSL 420
Query: 662 -----------PPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRL 710
P + A + ++P++V++L N E + E E + +D++
Sbjct: 421 PNSMTQKLLSDPLVAVQVQAARKIGERPSKVVQLLNCVYQEDL--IDPKEYEAICDDIKQ 478
Query: 711 ECARFGSVKSVNVVK 725
E + G+++ V V K
Sbjct: 479 EAEKHGALEEVLVPK 493
>gi|449707077|gb|EMD46798.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 712
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 58/326 (17%)
Query: 450 SMDSVQLTQS-----NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
++DSVQ++Q R +R+ V N+ S SEK +++ N + + + I
Sbjct: 123 AIDSVQISQQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTRDIIT 182
Query: 505 CV-IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ + E+ AF+EF T E+A AL DG + G+ +K++RPK++ V + +
Sbjct: 183 HIEVNYERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPV--------LPFI 234
Query: 564 DSVSGIVK---DSPHK--IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--- 615
+S +++ +P + +++G I ++ + + + + PLK + + D P
Sbjct: 235 SGLSQLMEPGTTNPRESILYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGK 294
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS--IMDNSGNPPFHGIPKHA 671
C F EY + K I +G+ +GG + V DG + S N F + H
Sbjct: 295 CYCLF-EYQNPEYKEK-ILTFDGINLGGNKIEVCSGV-DGFKHLPKASLNELFSKMFPHT 351
Query: 672 LPL------------------LKKPTE---------VLKLKNVFNPEGFSSLSELEVEEV 704
L + KP+E ++ + N+ PE + + E+
Sbjct: 352 TDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLT--DQQRYIEL 409
Query: 705 LEDVRLECARFGSVKSVNVVKYGDSN 730
++D+R C +G V+S+++ + + N
Sbjct: 410 IDDIRFVCQEYGEVESISIPRPTEEN 435
>gi|347968829|ref|XP_003436304.1| AGAP002908-PC [Anopheles gambiae str. PEST]
gi|333467822|gb|EGK96709.1| AGAP002908-PC [Anopheles gambiae str. PEST]
Length = 250
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGG 641
R+ + + V E++ +FG LKA++ + + AF EYV+ VT +AIAGLNG+++G
Sbjct: 52 RSRNCEQVKELLLSFGQLKAFNLVKDAATGLGKGYAFAEYVEYTVTDQAIAGLNGMQLGD 111
Query: 642 QVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK---PTEVLKLKNVFNPEGFSSLSE 698
+ L +A + + + P I L L+ PTEVL L N+ P+ E
Sbjct: 112 KKLIVQRASVGAKNSNAAVVAPVQ-IQVPGLSLVGSSGPPTEVLCLLNMVTPDELK--DE 168
Query: 699 LEVEEVLEDVRLECARFGSVKSVNV 723
E E++LED+R EC ++G V+SV +
Sbjct: 169 EEYEDILEDIREECNKYGVVRSVEI 193
>gi|67475980|ref|XP_653619.1| U2 snRNP auxiliary factor large subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56470591|gb|EAL48233.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 712
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 58/326 (17%)
Query: 450 SMDSVQLTQS-----NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
++DSVQ++Q R +R+ V N+ S SEK +++ N + + + I
Sbjct: 123 AIDSVQISQQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTRDIIT 182
Query: 505 CV-IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ + E+ AF+EF T E+A AL DG + G+ +K++RPK++ V + +
Sbjct: 183 HIEVNYERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPV--------LPFI 234
Query: 564 DSVSGIVK---DSPHK--IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--- 615
+S +++ +P + +++G I ++ + + + + PLK + + D P
Sbjct: 235 SGLSQLMEPGTTNPRESILYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGK 294
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFHGIPKHA 671
C F EY + K I +G+ +GG + V DG + S N F + H
Sbjct: 295 CYCLF-EYQNPEYKEK-ILTFDGINLGGNKIEVCSGV-DGFKHLPKASLNELFSKMFPHT 351
Query: 672 LPL------------------LKKPTE---------VLKLKNVFNPEGFSSLSELEVEEV 704
L + KP+E ++ + N+ PE + + E+
Sbjct: 352 TDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLT--DQQRYIEL 409
Query: 705 LEDVRLECARFGSVKSVNVVKYGDSN 730
++D+R C +G V+S+++ + + N
Sbjct: 410 IDDIRFVCQEYGEVESISIPRPTEEN 435
>gi|407043289|gb|EKE41863.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
nuttalli P19]
Length = 628
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 58/326 (17%)
Query: 450 SMDSVQLTQS-----NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
++DSVQ++Q R +R+ V N+ S SEK +++ N + + + I
Sbjct: 123 AIDSVQISQQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTRDIIT 182
Query: 505 CV-IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ + E+ AF+EF T E+A AL DG + G+ +K++RPK++ V + +
Sbjct: 183 HIEVNYERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPV--------LPFI 234
Query: 564 DSVSGIVK---DSPHK--IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--- 615
+S +++ +P + +++G I ++ + + + + PLK + + D P
Sbjct: 235 SGLSQLMEPGTTNPRESILYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGK 294
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS--IMDNSGNPPFHGIPKHA 671
C F EY + K I +G+ +GG + V DG + S N F + H
Sbjct: 295 CYCLF-EYQNPEYKEK-ILTFDGINLGGNKIEVCSGV-DGFKHLPKASLNELFSKMFPHT 351
Query: 672 LPL------------------LKKPTE---------VLKLKNVFNPEGFSSLSELEVEEV 704
L + KP+E ++ + N+ PE + + E+
Sbjct: 352 TDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLT--DQQRYIEL 409
Query: 705 LEDVRLECARFGSVKSVNVVKYGDSN 730
++D+R C +G V+S+++ + + N
Sbjct: 410 IDDIRFVCQEYGEVESISIPRPTEEN 435
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 118/281 (41%), Gaps = 66/281 (23%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL + + + +++FLN + G+ G+ P + + +K AF++ T+E+
Sbjct: 101 RRLYIGGIVPGTPDVLIVDFLNREMNQRGMTSSPGN-PVLAIQMTPDKNFAFLDMRTSEE 159
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF----------------VEVASGEAEKSVASVDSVS 567
A+ + DG F G++ +IKRPKE+ ++
Sbjct: 160 ATMCIALDGIPFEGTVFRIKRPKEYEGREANDPPSLFGMPSSSGGGFSSQGGAQGGSFGG 219
Query: 568 GIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH-----EEPCAFIEYV 622
+ D+P+KI+IGG+ +L + + E++ FG ++ + V E + ++P + Y
Sbjct: 220 SMGNDNPNKIYIGGLPFSLDEQQIRELLQTFGVIRNFSL-VREGNGQSKGQQPPPSMPY- 277
Query: 623 DQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVL 682
P + G +T +QA T V+
Sbjct: 278 ---GAPSSF--------GAAPITPMQA-----------------------------TPVV 297
Query: 683 KLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+L N+ PE + E +++++D+R EC+++G V SV +
Sbjct: 298 QLLNMVTPE--ELMDPEEYQDIVDDIREECSKYGEVVSVAI 336
>gi|428671645|gb|EKX72563.1| conserved hypothetical protein [Babesia equi]
Length = 455
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 39/287 (13%)
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
+ RP R + V N+P + L++FLN L++ + G+ PC+ I + AF+E
Sbjct: 72 ATRPYREIYVGNIPPVSDVSTLLDFLNEALIAINGTSMPGN-PCLKGWISSDSHYAFIEL 130
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEFV-EVASGEAEKSVASVDS---VSGI--VKD 572
T E+AS + G + G +++ RPK + E+ + +V ++D G+ +K+
Sbjct: 131 RTMEEASNCMQLTGLNCMGYNIRVNRPKTYTPEMLALAPSPTVPTLDPSLLAMGLKALKN 190
Query: 573 SPHKIFIGG-ISRTLSSKMVMEIVC------------------AFGPLKAYHFEVNEDHE 613
+ +I I T +K + + +C A G +K HF +N+D
Sbjct: 191 AREQIVAASDILATEKAKAMTDRLCIIDIPSETQDSDLKSAIEAIGQVKYIHF-INDDPS 249
Query: 614 EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPF--HGIPKHA 671
+ EY Q + + IA L L +V+ A+ AV G I NP + + K
Sbjct: 250 KRVCLFEY--QHIEQQKIA-LEQLPANHKVIMAIDAVTQGII-----NPSYIRQQLEKCE 301
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
+ + PT VL L N+ + E + E ++++DVR EC +G V
Sbjct: 302 IMRPEVPTRVLWLSNLVSKEELD--DDAEYFDIIDDVRTECEDYGQV 346
>gi|68076889|ref|XP_680364.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56501286|emb|CAI04220.1| conserved hypothetical protein [Plasmodium berghei]
Length = 652
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 47/293 (16%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
R L V N+P + + +++FLN LL + C+ I+ + AFVEF + +D
Sbjct: 214 RELYVGNIPQNIDIQEIVKFLNTCLLILYNKENENENICLKACIRGDTRYAFVEFRSLQD 273
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVDSV---SGIVKDSPHKIF- 578
S + +G F + L+I RPK F +E ++ ++D+ G++ IF
Sbjct: 274 TSNCMLLNGIYFYTNNLRIGRPKTFPIEYTKLIPPATIPTIDTYYLSQGLIGIKAFAIFH 333
Query: 579 ----------------------IGGISRTLSSKMVMEIVCAFGPLKAY-HFEVNEDHEEP 615
+ IS+ + + E++ AFG ++ + FE E+ +
Sbjct: 334 QNKDETKNEYIPVDMIKLQKLCVSNISKNNETNKIKELLEAFGEIQGFEFFEGEENSDTY 393
Query: 616 CAFIEY--VDQLVTPKAIAGLNG---LKVGGQVLT--AVQAVLDGSIMDNSGNPPFHGIP 668
+EY V+ + I N ++ ++L + ++ M N + IP
Sbjct: 394 ICLVEYNNVENAIQAHKILNQNTSYKIQFEYEILNDPIINQLVKKKYMQNKNSILSQQIP 453
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSV 721
+ L K T + + NPE + +E+ ED+++EC ++G V V
Sbjct: 454 TKVIVLSKIAT----FEELSNPEDY--------KEISEDIKIECEKYGPVLEV 494
>gi|156086444|ref|XP_001610631.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797884|gb|EDO07063.1| conserved hypothetical protein [Babesia bovis]
Length = 400
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
+ +P R + + N+P A L+EFLN+ L + + G+ PC I + AFVE
Sbjct: 20 ATKPYREIYIGNIPPQADVNNLLEFLNDALTAVNGTSIPGN-PCQKGWISADSHYAFVEM 78
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVD------SVSGIVK 571
T E+AS + G ++ L+I RPK + E+ + ++ ++D ++G+
Sbjct: 79 RTMEEASNCIQLSGINYMNYSLRINRPKTYNPEILTEAPSPTIPTLDPSLLALGIAGLKC 138
Query: 572 DSPHKIFIGGISRTLSSKMVMEIVCAF---------------GPLKAYHFEVNEDHEEPC 616
S + T +K + + +C G LK Y + + ED++ P
Sbjct: 139 ASEQISAAADMLATERAKAMTDRLCVLNVTDEPALKRELEAQGNLKYYQY-ITEDNKPPL 197
Query: 617 AFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK 676
EY + A+ GL V +V AV A+ G++ ++ F + ++K
Sbjct: 198 CIFEYEHIEMQNIALEGLKKRDV--KVELAVDALERGAMSED-----FMKQQIESCDIMK 250
Query: 677 K--PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PT VL L N+ + E + E ++++DVR EC +G V V +
Sbjct: 251 SQIPTRVLLLANLVSKEDLE--DDAEYYDIIDDVRCECEEYGPVVRVEM 297
>gi|70954273|ref|XP_746191.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526725|emb|CAH88205.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 686
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 39/289 (13%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
R L V N+P + + +++FLN LL + C+ I+ + AFVEF + +D
Sbjct: 254 RELYVGNIPQNIDIQEIVKFLNTCLLILYNKENENESICLKACIRGDTRYAFVEFRSLQD 313
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVDSV---SGIVKDSPHKIF- 578
S + +G F + L+I RPK F E ++ +D+ G++ IF
Sbjct: 314 TSNCMLLNGIYFYSNNLRIGRPKTFPAEYTKLIPPATIPPIDTYYLSQGLIGIKAFVIFH 373
Query: 579 ----------------------IGGISRTLSSKMVMEIVCAFGPLKAY-HFEVNEDHEEP 615
+ IS+ + + E++ AFG ++++ FE E+ +
Sbjct: 374 QNRDETKNEYLPVDMIKLQKLCVSNISKNNETNKIKELLEAFGEIQSFEFFEGEENSDTY 433
Query: 616 CAFIEY--VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALP 673
+EY V+ + I N ++ + V D +I N + K+A+
Sbjct: 434 ICLVEYNNVENAIQAHKILNQN---TSYRIQFEYEIVNDPTI--NQLVKKKYMQTKNAIL 488
Query: 674 LLKKPTEVLKLKNVFNPEGFSSLSELE-VEEVLEDVRLECARFGSVKSV 721
+ PT+V+ L + F LS E +E+ ED+++EC ++G V V
Sbjct: 489 SQQIPTKVVVLSKI---ATFDELSNPEDYKEISEDIKIECEKYGPVLEV 534
>gi|145536694|ref|XP_001454069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421813|emb|CAK86672.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 130/279 (46%), Gaps = 34/279 (12%)
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDAS 525
+ V N+PL+ K L E+ N + S + + I K +E + E
Sbjct: 98 MIVSNVPLNVQLKELEEYFNTLITSLDPKITERPIKAIE--YGATKSWVVLECSSKEAKR 155
Query: 526 AALCCDGCSFSGSI-LKIKRPKEFVE-VASGEAEKSVASVDSVSGIVKDSPHKIFIGGIS 583
A + D F + +K+++P++F+E + + +A+++ + D ++ ++++GG+
Sbjct: 156 ALVTQDQVQFVNNCKIKVEKPRKFLERILNPQAKEAELNADQK----QEDNTRLYLGGLP 211
Query: 584 RTLSSKMVMEIVCAFGPLKAYHF----EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKV 639
L + VM+++ +FG K ++ N + + F EY T KA+ LN L++
Sbjct: 212 TYLRDEDVMKLIQSFGTTKYFNLVKDTTSNTEISKGYCFFEYEKTASTAKALKALNNLQI 271
Query: 640 GGQVLTAVQAV--------LDGSIM---DNSGNPPFH---GIPKHALPLLKKPTEVLKLK 685
G + L + + GS + D P IP+ AL P++V++
Sbjct: 272 GDKKLKICKKINGRDQPSNYAGSFLASCDLLRIPQVQQMLTIPQSALI----PSKVVQFL 327
Query: 686 NVFNPEGFSSLSELEV-EEVLEDVRLECARFGSVKSVNV 723
N+ + E L E ++ EE++ED+R EC RFG ++ + +
Sbjct: 328 NMCSIE---DLYEDDIYEELMEDIRSECIRFGQIEKIEI 363
>gi|357446501|ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355482576|gb|AES63779.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 593
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 537 GSILKIKRPKEF---VEVASGEAEKS----VASVDSVSGIV--KDSPHKIFIGGISRTLS 587
G ++++RP ++ + G + S +++V +G + + +IF+GG+ +
Sbjct: 322 GVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGGAEGLDRIFVGGLPYYFT 381
Query: 588 SKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQV 643
+ E++ AFGPL++ F++ D E + F Y D VT A A LNGLK+G +
Sbjct: 382 EVQMRELLQAFGPLRS--FDIVRDKETGNSKGYGFCIYQDPAVTDIACAALNGLKMGDKT 439
Query: 644 LTAVQAVLDGSIMDNSGNPPFHGIPKH------ALPLL-----------KKPTEVLKLKN 686
LT +A + N F +H AL ++ + PT+VL L
Sbjct: 440 LTVRRATVSAHSKPEEDN-IFARAQQHIAMQKIALEVVGLNIPGVPTNDESPTKVLCLTE 498
Query: 687 VFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVV 724
E + E EE+LED+R EC +FG++ VNVV
Sbjct: 499 AVTTEQLTDNGEY--EEILEDMRDECRKFGTL--VNVV 532
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K+++ +D+AP T P+ S Q AH M+ +T GIS +L+ +
Sbjct: 114 KRTSGFDMAPPATGVTPT---VSGQMPGI-AH-MIQG----ATQNFSPYGISQIGALSLM 164
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
V Q+ R RR+ V LP A+E+++ F + +++ G + I
Sbjct: 165 QVQ---PMTQQATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYI 221
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSG 537
EK AFVE T E+AS A+ DG F G
Sbjct: 222 NHEKKFAFVEMRTVEEASNAMALDGIVFEG 251
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 143/355 (40%), Gaps = 69/355 (19%)
Query: 425 DPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFL 484
+P + +S+ +AK+ S ++ + +P R L V NLP + + L EFL
Sbjct: 208 NPTITQLMAQYPTMSLQDIIAKMQASNVTMAAAVAQKPARELYVGNLPPNVTGPQLQEFL 267
Query: 485 NNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKR 544
+ + G+ G+ P I + AF E + E+ + AL + S G LK R
Sbjct: 268 STIIQQVGLTTQPGN-PIINTWTSTDGHFAFCEMRSVEECNLALLLNQLSLLGQPLKFGR 326
Query: 545 PKEFV-------EVA----------------SGEAEKSVAS-----------VDSVSGIV 570
P+ F+ +V+ + A+ +V+S ++S I
Sbjct: 327 PRSFMGPPQPMPQVSARTQTALTNLGCTPNPAWFAQHTVSSTETTTTETTLAEATLSAIA 386
Query: 571 KDSP---------HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPC----A 617
P +++ + I L+ + V E+V FG LK+ F + +D A
Sbjct: 387 AAQPAGSEAVSSGNRLIMSNIPVVLAEEQVKELVEPFGKLKS--FTLVKDSATGASLGSA 444
Query: 618 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKK 677
EY D V +A+ GLNGL +GG +L S+ + A +
Sbjct: 445 LFEYEDSDVAAQAVEGLNGLSIGGILL---------SVQRQPASSAAALPSAAAANPEDQ 495
Query: 678 PTEVLKLKNVFNPEGFSSLSEL----EVEEVLEDVRLECARFGSVKSVNVVKYGD 728
P+ VLK+ N+ S+ EL E ++ EDV EC RFG V + + + D
Sbjct: 496 PSAVLKMANMV------SIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKD 544
>gi|167395950|ref|XP_001741817.1| hexokinase [Entamoeba dispar SAW760]
gi|165893477|gb|EDR21726.1| hexokinase, putative [Entamoeba dispar SAW760]
Length = 974
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 139/319 (43%), Gaps = 58/319 (18%)
Query: 450 SMDSVQLTQS-----NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIG 504
++DSVQ++Q R +R+ V N+ S SEK +++ N + + I
Sbjct: 341 AIDSVQISQQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDPRDIIT 400
Query: 505 CV-IQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASV 563
+ + E+ AF+EF T E+A AL DG + G+ +K++RPK++ V + +
Sbjct: 401 HIEVNYERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPV--------LPFI 452
Query: 564 DSVSGIVK---DSPHK--IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--- 615
+S +++ +P + +++G I ++ + + + + PLK + + D P
Sbjct: 453 SGLSQLMEPGTTNPRESILYMGNIPLQMTDEQIRKKLENLNPLKKFFVIRDPDLGAPQGK 512
Query: 616 --CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS--IMDNSGNPPFHGIPKHA 671
C F EY + K I +G+ +GG + V DG + S N F + H
Sbjct: 513 CYCLF-EYQNPEYKEK-ILTFDGINLGGNKIEVCSGV-DGFKHLPKASLNELFSKMFPHT 569
Query: 672 LPL------------------LKKPTE---------VLKLKNVFNPEGFSSLSELEVEEV 704
L + KP+E ++ + N+ PE + + E+
Sbjct: 570 TDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIVIFNMVYPEDL--IDQQRYIEL 627
Query: 705 LEDVRLECARFGSVKSVNV 723
++D+R C +G V+S+++
Sbjct: 628 IDDIRFVCQEYGEVESISI 646
>gi|297736736|emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 63.2 bits (152), Expect = 8e-07, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 28/182 (15%)
Query: 564 DSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEY 621
DSV G + P +IF+GG+ + + + E++ +FGPL+ + + D + + F Y
Sbjct: 6228 DSVIG-GAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVY 6286
Query: 622 VDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDG----SIMDN-----------------SG 660
D VT A A LNGLK+G + LT +A + S DN +G
Sbjct: 6287 QDPAVTDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAG 6346
Query: 661 NPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEV-EEVLEDVRLECARFGSVK 719
G + + PT+VL L V N L + E EE+LED+R E +FG++
Sbjct: 6347 GLNLPGAGMAFTAIAETPTKVLCLTEVIN---IDELRDDEAYEEILEDMRDEGGKFGALV 6403
Query: 720 SV 721
V
Sbjct: 6404 HV 6405
>gi|159163083|pdb|1U2F|A Chain A, Solution Structure Of The First Rna-Binding Domain Of
Hu2af65
Length = 90
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+EF + ++
Sbjct: 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDE 60
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF 548
+ A+ DG F G LKI+RP ++
Sbjct: 61 TTQAMAFDGIIFQGQSLKIRRPHDY 85
>gi|449689952|ref|XP_004212193.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 210
Score = 62.8 bits (151), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQA 514
Q Q+ RR+ + N+P SE +++F N + S + G+ P + C I EK A
Sbjct: 100 QGAQTTWQARRIYLGNIPFGISEDLMVDFFNAKMRESDIARQPGN-PVLACQINLEKNFA 158
Query: 515 FVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
F+EF + E+ + A+ DG G LKI+RPK++
Sbjct: 159 FLEFRSVEETTLAMAFDGIMLQGQALKIRRPKDY 192
>gi|145523992|ref|XP_001447829.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415351|emb|CAK80432.1| unnamed protein product [Paramecium tetraurelia]
Length = 419
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 411 NQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPM---RRLC 467
+Q + ++ ++P+ Q PLA + ++ L + M +Q ++ + R+L
Sbjct: 99 DQVSLGEFETILPANPL----QNPLASLEALQAMTPL-IQMQRLQQLRAQADVKADRKLY 153
Query: 468 VENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAA 527
V NLP ++ K L +FLN LL GV H C C I F+EF + E+A+
Sbjct: 154 VGNLPPNSQPKELQDFLNQTLLKMGVSSEHAGSIC-NCWIDSNGHFGFIEFRSPEEATQG 212
Query: 528 LCCDGCSFSGSILKIKRPKEFVEVASG-----EAEKSVASVDSVSGIVKDS 573
F G LKI RPK F+ + +E++ + S+ G KDS
Sbjct: 213 FILKDVIFKGHQLKIGRPKSFLTSLAAVNQQMMSEQAFNPLSSMKGNDKDS 263
>gi|440290938|gb|ELP84237.1| splicing factor u2af large subunit, putative [Entamoeba invadens
IP1]
Length = 623
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLL-SSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAE 522
RR+ V N+ + +E+ ++E N+ + V S + + EK AF+EF T +
Sbjct: 124 RRVYVGNINTTTTEQDIVEAFNDAMRRGDYVDKNDKSDIIVSTEVNYEKSYAFIEFRTFD 183
Query: 523 DASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGI 582
A AL DG + G+ +K++RPK+F V + S++ + V G K +++G I
Sbjct: 184 QAVKALSLDGLTIKGASVKVRRPKDFNPVLPFIS--SLSQLMEV-GTTKPRDGVMYMGNI 240
Query: 583 SRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP-----CAFIEYVDQLVTPKAIAGLNGL 637
+S + + + + PLK Y + P C F EY + K +A NG+
Sbjct: 241 PLQMSDEQIQKKLENLNPLKKYVVVRDPSLGAPQGKCYCLF-EYQNPEYKDKVLA-FNGI 298
Query: 638 KVGG---QVLTAVQA----------------------VLDGSIMDNS--GNPPFHGIPKH 670
+GG +V + ++ ++ +++++S + F + +
Sbjct: 299 ILGGDKIEVCSGLEGFKHFPTAALNELCMKMFPQRTDIITATLLNSSVGYSDVFERVLHN 358
Query: 671 ALPLLK-KPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDS 729
+ L + + T V+ L N+F PE + +E E+++D+R C +G V S+++ + ++
Sbjct: 359 SEDLSQYECTRVIVLFNMFFPEDLN--NEQRYIELVDDIREACIAYGEVISISIPRPTET 416
Query: 730 N 730
N
Sbjct: 417 N 417
>gi|145547916|ref|XP_001459639.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427465|emb|CAK92242.1| unnamed protein product [Paramecium tetraurelia]
Length = 402
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 465 RLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDA 524
RL + NLP + + L ++ + S G G P I +Q + FV+F + E+
Sbjct: 89 RLYLGNLPDNVDKDHLHNYIRQQMESHGAVLDPGD-PVIQVQLQPGQKYCFVQFRSIEET 147
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISR 584
AAL D ++ G LK KR K++ E E+ V + K+ K+F+ G++
Sbjct: 148 EAALQIDTINYQGKPLKFKRVKDYEISPRIEGEREVPKIQP-----KEPAQKLFVCGLAP 202
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPC---AFIEYVDQLVTPKAIAGLNGLKVGG 641
+ + I+ +G LK+ V D + C AF E+ L T + GLN +GG
Sbjct: 203 DTDNDALANILSEYGNLKS--LNVVRDIKNVCKGFAFCEFETDLETQNCVNGLNNKVIGG 260
Query: 642 QVLTA 646
++L
Sbjct: 261 RLLQV 265
>gi|432107103|gb|ELK32526.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 243
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 569 IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLV 626
+V DS HK+F+GG+ + V E++ FGPLKA++ + + CAF EYVD +
Sbjct: 121 VVPDSAHKLFMGGLPNYMKDDQVKELLTWFGPLKAFNLVKDSTTGLSKGCAFYEYVDISI 180
Query: 627 TPKAIAGLNGLKVGGQVLTAVQA 649
+A+AG NG+++G + L +A
Sbjct: 181 RDQAMAGPNGMQLGVKKLLVQRA 203
>gi|291001985|ref|XP_002683559.1| predicted protein [Naegleria gruberi]
gi|284097188|gb|EFC50815.1| predicted protein [Naegleria gruberi]
Length = 477
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 23/108 (21%)
Query: 507 IQREKGQAFVEFLTAEDASAAL-CCDGCSFSGSILKIKRPKEFVEV-------------- 551
I KG AFV+F T ++A+ + C +G F GSILKI RPK+FV+
Sbjct: 125 ISMHKGYAFVDFRTPQEATYCVNCLNGTQFRGSILKINRPKDFVDPQVTICYTYNRANGG 184
Query: 552 -ASGEA-------EKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMV 591
+SG A + + + S +G + DSP+K+FIG + + LS K +
Sbjct: 185 KSSGSAISNQIVNDVLIDVMPSKNGFILDSPNKLFIGNLPKELSLKQI 232
>gi|114794658|pdb|2HZC|A Chain A, Crystal Structure Of The N-terminal Rrm Of The U2af Large
Subunit
Length = 87
Score = 61.2 bits (147), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+M+F N + G+ G+ P + I ++K AF+EF + ++
Sbjct: 7 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDE 65
Query: 524 ASAALCCDGCSFSGSILKIKRP 545
+ A+ DG F G LKI+RP
Sbjct: 66 TTQAMAFDGIIFQGQSLKIRRP 87
>gi|5822501|pdb|2U2F|A Chain A, Solution Structure Of The Second Rna-Binding Domain Of
Hu2af65
Length = 85
Score = 60.8 bits (146), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIA 632
HK+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIA
Sbjct: 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIA 61
Query: 633 GLNGLKVGGQVLTAVQA 649
GLNG+++G + L +A
Sbjct: 62 GLNGMQLGDKKLLVQRA 78
>gi|429328959|gb|AFZ80718.1| hypothetical protein BEWA_001250 [Babesia equi]
Length = 711
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 472 PLSASEKALMEFLNNFLLS-SGVQHVHGSLPCIGC-VIQREKGQAFVEFLTAEDASAALC 529
PL + +++F N L++ S ++G +P + + +E+G F+EF TAE A
Sbjct: 357 PLGIRLQDVVDFFNGALMTMSTSIDINGPMPVMKTEIFNQEQGYCFLEFTTAEYADLCYK 416
Query: 530 CDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSK 589
DG +G LK++RP +F S++S D+ KIF+ I + S +
Sbjct: 417 LDGIQCNGYSLKLRRPIDF--------SSSMSSEDT----------KIFVQNIPESFSEE 458
Query: 590 MVMEIVCAFGPLKAYHFEVNEDHE--EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAV 647
+ +++ A G LK + ++ + F EY +A+ LNG + VL+
Sbjct: 459 DIRKLLEAHGKLKTCNLVIDPFTRLNKGYGFFEYESSSSAKEAVIHLNGHVIQNNVLSVK 518
Query: 648 QAVLD-----GSIMDNSGNPPFHGIPKHAL--PLL-----------KKPTEVLKLKNVFN 689
A G D + + PLL +P+ V++L NV
Sbjct: 519 HAAFSSFAAGGKPADCRASSIITSVSHCVFSNPLLGLQMQNGRKKGSEPSRVVQLLNVVY 578
Query: 690 PEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
PE L + E+L++++ E ++G ++ + +
Sbjct: 579 PEDI--LDDKNYREMLKEIKEEAQKYGPLEEIYI 610
>gi|359497129|ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 60.5 bits (145), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 572 DSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTPK 629
+ P +IF+GG+ + + + E++ +FGPL+ + + D + + F Y D VT
Sbjct: 6 EGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 65
Query: 630 AIAGLNGLKVGGQVLTAVQAVLDG----SIMDN-----------------SGNPPFHGIP 668
A A LNGLK+G + LT +A + S DN +G G
Sbjct: 66 ACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLPGAG 125
Query: 669 KHALPLLKKPTEVLKLKNVFNPEGFSSLSELEV-EEVLEDVRLECARFGSVKSV 721
+ + PT+VL L V N L + E EE+LED+R E +FG++ V
Sbjct: 126 MAFTAIAETPTKVLCLTEVIN---IDELRDDEAYEEILEDMRDEGGKFGALVHV 176
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 33/192 (17%)
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQ----REKGQAFVEFLTA 521
+ V NL L A E+ + EF + V G + I C+ + KG A+VEF T
Sbjct: 595 VLVLNLDLKADERDIYEFFS---------EVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQ 645
Query: 522 EDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV--KDSPHKIFI 579
E AL +G +LK RP +++ S +AEK+ A+ + + D P K++I
Sbjct: 646 EAVVKALSANGY-----MLK-NRP---IKIQSSQAEKNRAAKAAKHQPIDPNDIPIKLYI 696
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP----C---AFIEYVDQLVTPKAIA 632
GG+ L + E+ F P EV E H +P C FI++ +A+
Sbjct: 697 GGLVGPLGNISEQELKQLFNPFGEI-LEV-EIHRDPYTGKCKGFGFIQFFRASEAIEAMG 754
Query: 633 GLNGLKVGGQVL 644
LNG+++ G+ L
Sbjct: 755 VLNGMEIAGREL 766
>gi|209878476|ref|XP_002140679.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556285|gb|EEA06330.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 577
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 53/308 (17%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
+P R + V NLP L+EF+N FL+ + G+ P + I + AF E +
Sbjct: 180 KPYREVYVGNLPSGIGTTTLLEFMNQFLIKNCNITTPGN-PFVSAWISSDGKYAFCECRS 238
Query: 521 AEDASAALCCDG-CSFSGSILKIKRPKEFVE--------------VASGEAEKSVASVDS 565
E+A+ AL + + +G+IL+I RPK V+S + + + +
Sbjct: 239 MEEANMALQLNNTINLNGNILRIGRPKTIENSSNINSSNEPNNSVVSSISTQSNTTFLSN 298
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIV----------CAFGPLKAYHFEVNEDHEEP 615
+ I+K + +I I G + S + + +I+ + P + + +
Sbjct: 299 IQPIIKKA-DRIVISGFPYSYSDEDIEDIIREVNGNQAIKLLYVPPNSNKGRIESSNCLK 357
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQA--VLDGSIMDNSGNPPFHGIPKHALP 673
A E+ D ++T + I +N V L A ++ L + N + H I + +
Sbjct: 358 IAICEFEDVVITERVIRRVNTQNVCNLKLNAFRSHEALQNKYILNVLSDEIHKIYDYEVK 417
Query: 674 LL--------------KKPTEVLKLKNVFNPEGFSSLSELEVE----EVLEDVRLECARF 715
L + P +K+ N+ PE EL V+ E++++++ E ++
Sbjct: 418 QLSSDYSEISTFLLRGQIPCRCIKISNIITPE------ELVVDNIYNEIMDEIKQEVCKY 471
Query: 716 GSVKSVNV 723
G++K + +
Sbjct: 472 GNIKHIVI 479
>gi|403223258|dbj|BAM41389.1| snRNP splicing factor U2AF [Theileria orientalis strain Shintoku]
Length = 534
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
+ RP R + + N+P L++ +N L+S + G+ PC+ I + AFVE
Sbjct: 119 ATRPYREIYIGNIPPVGDIAILLDIINQALISVNGTSMPGN-PCLKGWISSDGHYAFVEL 177
Query: 519 LTAEDASAALCCDGCSFSGSILKIKRPKEF------------------------VEVASG 554
T E+AS + G + G +K+ RPK + ++
Sbjct: 178 RTMEEASNCMQLTGLNIMGHNIKVNRPKTYDPDLMSKAPSPTVPTLDPSLLAMGLQALKS 237
Query: 555 EAEKSVASVDSVSG-IVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 613
E+ VA+ D ++ K ++ I I + V+ +V + G +K Y + V+E E
Sbjct: 238 AREQIVAASDVLAAEKAKVMTDRLCIVDIPPEADKQTVINLVHSMGEVK-YTYFVDEPAE 296
Query: 614 ----EPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK 669
+ EY++ KA+ + K+ +++ A+ AV G I P +
Sbjct: 297 SGTNKRVFLFEYMNMDHQKKAMEEIP--KMNYRLILAIDAVTQGMIA-----PEYIKKQL 349
Query: 670 HALPLLKK--PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
+ ++K PT L L N+ + E + E ++++DV+ EC +G V
Sbjct: 350 ESCAIMKPEVPTRALLLGNLVSKEELD--DDAEYVDIIDDVKTECEDYGVV 398
>gi|145544238|ref|XP_001457804.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425622|emb|CAK90407.1| unnamed protein product [Paramecium tetraurelia]
Length = 435
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 47/290 (16%)
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCI--GCVIQREKGQAFVEFLTAED 523
+ V N+PL+ K L E+ N + S + + I G K +E + E
Sbjct: 98 MIVSNVPLNVQLKELEEYFNTLITSLDPKITERPIKAIEYGAT----KSWVVLECSSKEA 153
Query: 524 ASAALCCDGCSFSGSI-LKIKRPKEFVE-VASGEAEKSVASVDSVSGIVKDSPHKIFIGG 581
A + D F + +K++RP++F+E + + +A + S + ++ ++++GG
Sbjct: 154 KRALVTQDQVQFVNNCKIKVERPRKFLERILNPQAREGELSAEQK----QEDNTRLYLGG 209
Query: 582 ISRTLSSKMVMEIVCAFGPLKAYHF----EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGL 637
+ L + VM+++ +FG K ++ N + + F EY + T KA+ LN L
Sbjct: 210 LPTYLRDEDVMKLIQSFGTTKYFNLVKDTTSNTEISKGYCFFEYENTGSTAKALKALNNL 269
Query: 638 KVGGQVLTAVQAV-----------------LDGSIM---DNSGNPPFH---GIPKHALPL 674
++G + L + GS + D P IP+ AL
Sbjct: 270 QIGDKKLKICKVQGEPQQNKKINGREQPSNYAGSFLASCDLLRLPQIQQMLTIPQSALI- 328
Query: 675 LKKPTEVLKLKNVFNPEGFSSLSELEV-EEVLEDVRLECARFGSVKSVNV 723
P++V++ N+ + E L E ++ EE++ED+R EC RFG ++ + +
Sbjct: 329 ---PSKVVQFLNMCSVE---DLYEDDLYEELMEDIRSECIRFGQIEKIEI 372
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 35/202 (17%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQ----RE 510
++ ++ R + V NL L A E+ + EF V G + I C+ +
Sbjct: 478 EMEEAKRDDLTVLVLNLDLKADERDIYEFF---------SEVAGKVRDIQCIKDQRSGKS 528
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV 570
KG A+VEF T E AL +G +LK RP +++ S +AEK+ A+ + +
Sbjct: 529 KGVAYVEFYTQEAVIKALAANGM-----MLK-NRP---IKIQSSQAEKNRAAKAAKHQPI 579
Query: 571 --KDSPHKIFIGGISRTLSSKMVMEIVCAFGPL-KAYHFEVNEDHEEP-------CAFIE 620
D P K++IGG+ LS+ E+ F P E+ H +P FI+
Sbjct: 580 DPNDIPLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEI---HRDPYTGKSKGFGFIQ 636
Query: 621 YVDQLVTPKAIAGLNGLKVGGQ 642
+ +A+ +NG++V G+
Sbjct: 637 FHKASEAIEALTVMNGMEVAGR 658
>gi|85000357|ref|XP_954897.1| snrnp splicing factor (U2AF) [Theileria annulata strain Ankara]
gi|65303043|emb|CAI75421.1| snrnp splicing factor (U2AF), putative [Theileria annulata]
Length = 486
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 35/289 (12%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
++ R + + N+P + LM+ +N L+S + G+ PC+ I + AF+E
Sbjct: 100 SKAFREIYIGNIPPVGDIEILMDIINQALISVNGTSMPGN-PCLKGWISSDGHYAFIELR 158
Query: 520 TAEDASAALCCDGCSFSGSILKIKRPKEF-VEVASGEAEKSVASVD-------------- 564
T E+AS + G + G +K+ RPK + +V S +V ++D
Sbjct: 159 TMEEASNCMQLTGLNIMGHNIKVNRPKTYDADVFSKAPSPTVPTLDPSLLAMGVQALKSA 218
Query: 565 -----SVSGIV-----KDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEE 614
+ S I+ K ++ + GI + + + V++++ + G +K HF + + E
Sbjct: 219 KEQIAAASDILAAEKAKSITDRLCLVGIPKDMEQQTVVDLLQSQGTIKFTHFIMEKG--E 276
Query: 615 PCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPL 674
EY + A+ L K G +V+ A+ AV G I S + +L
Sbjct: 277 MVVLFEYENLEDQKSALESLP--KQGYRVIMAIDAVTQGII---SPQQIKTQLANCSLMK 331
Query: 675 LKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
+ PT L L N+ + E + E ++++D+R EC +G V V +
Sbjct: 332 AEIPTRALLLSNLVSKEELD--DDEEYVDIIDDIRCECELYGVVLRVEL 378
>gi|213408691|ref|XP_002175116.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|212003163|gb|EEB08823.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 511
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 38/354 (10%)
Query: 381 PINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISV 440
P+N+ K+S WD+ P +V T++QA S + + S T P +
Sbjct: 114 PLNQWKRKRSM-WDMKPPGYENV-----TADQAKMSGLFPLPGAP--RSATADPEKLAAF 165
Query: 441 SASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGV------Q 494
+ S A ++ ++R RRL V+ LP + L + +S +
Sbjct: 166 ARSTAGSIIAPPPPIQPGASRQARRLKVKELPAEFEVEDLKNVFEESISTSSFHKDRDTK 225
Query: 495 HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFV--EVA 552
HV PC + + A +E T EDA+ F + I R + ++ +++
Sbjct: 226 HVTAIYPC------KTERYAIIELATPEDATFIWGARKLKFKNETVLIDRLEGYIVPQIS 279
Query: 553 SGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN--E 610
S A+K + ++ V DS K++IG + L+ + E++ FG L++ N +
Sbjct: 280 SEVAQKRPK--NDLNQKVLDSADKVYIGSLPLYLNEDQISELLKPFGELQSLFLAKNSAD 337
Query: 611 DHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKH 670
AF EY+ A+ GLN ++ G L VQ G I +P G+
Sbjct: 338 MTSRGYAFCEYISSESATAAVQGLNNMEFGDTRLM-VQFACVG-IQQPVPSPRSVGM--A 393
Query: 671 ALPLLKK------PTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSV 718
AL L K PT VL++ N+ + + +L + E++ + V+ +C +G V
Sbjct: 394 ALIELSKSSTEAAPTRVLQIHNLLDAD--ETLDTEDYEDIRKSVQNKCNEYGQV 445
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 51/282 (18%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQ-----A 514
N+ MR L V LP S L +FLN + +Q++ + VI+ G A
Sbjct: 745 NKVMRELHVGGLPHGVSGVQLQDFLN-----AAMQYLKIATSAGNPVIRIAMGPDGTNFA 799
Query: 515 FVEFLTAEDASAALC-CDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDS 573
F+E T E+ +A L G LK RPK A+ A K K+
Sbjct: 800 FIELRTEEETNATLGRMSGIQCGTGHLKFGRPKAHAAGATAVAPK------------KEE 847
Query: 574 PHKIFIGGISRTLSSKMVMEIVCAFGPLKAYH-FEVNEDHEEPCAFIEYVDQLVTPKAIA 632
+ + + +L+ V E++ FG LK ++ + + + A EY D A++
Sbjct: 848 SSVLMVMNLPDSLTDDHVRELLSPFGELKKFNLLKDSSGKSKGTAVFEYTDMENGQLALS 907
Query: 633 GLNGLKVG-GQVLTA-VQAVLDGSIM---------DNSGNPPFHGIPKHALPLLKKPTEV 681
GL+GL VG G+++ V A++ +++ D N +PT V
Sbjct: 908 GLSGLPVGKGKLMVQRVPAMMAATLLKPVKVKEVEDEQDN--------------VEPTCV 953
Query: 682 LKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNV 723
++L N+ E + + E E+ DV EC ++G VKS V
Sbjct: 954 VRLSNMVEVEELA--DDTEYAEIKGDVVEECEQYGKVKSAEV 993
>gi|403345499|gb|EJY72120.1| Splicing factor U2af large subunit, putative [Oxytricha trifallax]
Length = 437
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 116/304 (38%), Gaps = 54/304 (17%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFL--LSSGVQHVHGSLPCIGCVIQREKGQ 513
LT N+ R+L V N+P + +ME LN L L P +G I +
Sbjct: 87 LTNHNKAERQLYVGNIPPGLAVPQIMELLNTALKELGKDAGIFQEGDPIVGAWISGDGHY 146
Query: 514 AFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFV--------------EVASG----- 554
AFV+F TAE+A+ S G+ LK+ RPK + SG
Sbjct: 147 AFVDFRTAEEATQGFALQQVSIHGNNLKVGRPKNATGPIPNPSQLLAGNPNLMSGQNVIS 206
Query: 555 -------EAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF- 606
+ K++ D + I++ K+ + S + + +I FG +K
Sbjct: 207 NNKKKTNQGLKNLQLGDQGNQIIQALNTKVMVSNFPVNHSKESIHKICEVFGKVKNVDLL 266
Query: 607 -EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVL--------TAVQAVLDGSIMD 657
++ + +E+ D+L K GL G K+ +VL +A ++G +
Sbjct: 267 KDITTGEFKGQVNVEFEDELEAKKGYTGLMGFKIDEKVLFVKRLTTISAPTTQIEGEVFK 326
Query: 658 NSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECARFGS 717
N + KPTE L LKN E + + + E+ V E +R+G
Sbjct: 327 NL--------------IEDKPTECLMLKNCIILEEMTERDDYKDLEIA--VEEEMSRYGK 370
Query: 718 VKSV 721
V V
Sbjct: 371 VVKV 374
>gi|340506650|gb|EGR32741.1| u2 snrnp auxilliary splicing factor, putative [Ichthyophthirius
multifiliis]
Length = 276
Score = 57.4 bits (137), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 36/191 (18%)
Query: 561 ASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHE---EP 615
A +DS GI ++ KI++GG+ L + ++ FG LK ++ + NE+ E +
Sbjct: 34 AILDSEEGIQEN---KIYMGGLPTYLKDPEIKKLCETFGKLKYFNLAKQQNENKEWVSKG 90
Query: 616 CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGS-------IMDNSGN------- 661
F EY D+ VT +AI LNGL G + L + D + I ++SG+
Sbjct: 91 YCFFEYEDKEVTDRAIKALNGLPCGDRKLKVSKVTRDQNKLAKTQQIQNDSGSYLGDCHL 150
Query: 662 ------PPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEV-EEVLEDVRLECAR 714
IP++ +P+ V++L N+ +PE L E ++ E+ +DV+ EC +
Sbjct: 151 IKNEFVRKMLSIPEYTY----QPSRVIQLLNMCSPE---DLFEDDIYNEIYQDVQSECEK 203
Query: 715 FGSVKSVNVVK 725
G ++ V +V+
Sbjct: 204 IGPIEKVEIVR 214
>gi|340503018|gb|EGR29650.1| splicing factor u2af large subunit, putative [Ichthyophthirius
multifiliis]
Length = 438
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 465 RLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDA 524
R+ + N+P + + F+ LL SG G+ P I K F++ + E+
Sbjct: 117 RIYIGNIPDPIDTEDVCHFVYKSLLESGGLLEPGN-PIISKKNDPIKKFIFLQLRSIEET 175
Query: 525 SAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS-----VSGIVKDSPHKIFI 579
SA + DG + G L+ +RPK++ + E + + +D V V+++ +K+ +
Sbjct: 176 SACMQLDGILYKGKSLRFRRPKDYTTMPQVEGTRKIPILDRNKLRIVQTQVENTYNKLQV 235
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGL 637
I T+S + VM+I+ +G L+++H V+ E AF EY+ T + L+G
Sbjct: 236 MNIPETISEEHVMQILQNYGELRSFHLAVDIYTGESKGFAFCEYLTDKATMDCLNQLSGQ 295
Query: 638 KVGGQVLTA 646
++ +++
Sbjct: 296 QILNKIINV 304
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 466 LCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQ----REKGQAFVEFLTA 521
+ V NL L A E+ + EF + V G + I C+ + KG A+VEF T
Sbjct: 320 VLVLNLDLKADERDIYEFFS---------EVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQ 370
Query: 522 EDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIV--KDSPHKIFI 579
+ AL S +G +LK RP ++V S +AEK+ A+ + + D P K++I
Sbjct: 371 DSVIKAL-----SVNGYMLK-NRP---IKVQSSQAEKNRAAKATKHHPIDPNDIPLKLYI 421
Query: 580 GGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP-------CAFIEYVDQLVTPKAIA 632
GG+ LS+ E+ F P +V E H +P FI++ +A+
Sbjct: 422 GGLLGPLSNITEQELKQLFNPFGDI-LDV-EIHRDPYTGKSKGFGFIQFHKASEAIEAMT 479
Query: 633 GLNGLKVGGQVLTAVQA 649
+NG++V G+ + A
Sbjct: 480 VMNGMEVAGREIKVSYA 496
>gi|403224363|dbj|BAM42493.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 377
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 125/310 (40%), Gaps = 51/310 (16%)
Query: 445 AKLNVSMDSVQLTQ---------SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQH 495
K + + D+V LT+ + + +RL + NLP ++EF N LL+ +
Sbjct: 26 GKWDTAEDAVSLTELKAKTSEEENKKRQKRLYIGNLPAGMKLGDVVEFFNGALLAMVPSN 85
Query: 496 VHGSLPCIGC--VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVAS 553
P + + E+G F+EF T E A DG + +G LKI+RP +F +
Sbjct: 86 QTTKDPLVSKTEIYNPEQGYCFLEFKTPELTDLAFKLDGITCNGYSLKIRRPIDFTQ--G 143
Query: 554 GEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNED 611
+ E + KIFI ++ ++ + E++ G LK ++ +
Sbjct: 144 NQLEDT----------------KIFIQNVATDVTEAELRELLEKHGKLKLFNLIKDPITG 187
Query: 612 HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAV-----------------LDGS 654
+ F EY D A+ LNG + VL+ A L S
Sbjct: 188 ASKGYGFFEYEDSRSAKMAVLHLNGQALKQNVLSVKHAAFGYFASGGKPIDCKASNLPNS 247
Query: 655 IMDNSGNPPFHGIPKHALPLL-KKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRLECA 713
I + N P G+ ++ KPT V++L N+ E LS+ E++ + E
Sbjct: 248 ITQSILNNPLLGLQLQNSKIVGAKPTRVVQLLNMVFSEDL--LSDYNYNEIVRLTKEEAG 305
Query: 714 RFGSVKSVNV 723
++G++ + V
Sbjct: 306 KYGALDEIVV 315
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQ----RE 510
++ ++ R + V NL L A E+ + E + +H G + + CV R
Sbjct: 134 EIEEAQREDLTVLVINLYLGADERKIYEVFS--------EHA-GKVRDVQCVRDARSGRS 184
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS-----VDS 565
KG A+VEF T E AL +G +G ++++ S +AEK+ A+ +
Sbjct: 185 KGVAYVEFYTQESVIKALAMNGFELNGQRIRVQ---------SSQAEKNRAARAAKMIQQ 235
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPL-KAYHFEVNEDHEEPC----AFIE 620
+ V DSP I + G++ +LSS +EI F P E+ D A+I+
Sbjct: 236 QTVEVADSPFTIQVTGLTGSLSSISEVEIRQMFSPFGNIISVEILRDPHSNLPLGQAYIK 295
Query: 621 YVDQLVTPKAIAGLNGLKVGGQVLTAVQA 649
+ +A+ +NG +GGQ + A
Sbjct: 296 FKRTSEAKEAVTAMNGFDIGGQTIKVAYA 324
>gi|145542929|ref|XP_001457151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424966|emb|CAK89754.1| unnamed protein product [Paramecium tetraurelia]
Length = 429
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 54/299 (18%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
N P + + N+PL+ K L E+ N L++S ++ P K +E
Sbjct: 87 NNPFM-MIISNVPLNVQLKELEEYFNT-LITSLDPKINDR-PIKSIEYGATKSWVVLECS 143
Query: 520 TAEDASAALCCDGCSFSGSI-LKIKRPKEFVE------VASGEAEKSVASVDSVSGIVKD 572
+ E A + D F + +K++RP++F+E GE D+
Sbjct: 144 SKEAKRALVTQDQVQFVNNCKIKVERPRKFLERILNPQTKDGELNPDQKQEDNT------ 197
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF----EVNEDHEEPCAFIEYVDQLVTP 628
++++GG+ L + VM+++ +FG K ++ N + + F EY + T
Sbjct: 198 ---RLYLGGLPTYLRDEDVMKLIQSFGITKYFNLVKDTTSNTEISKGYCFFEYENAQSTA 254
Query: 629 KAIAGLNGLKVGGQVL--TAVQAVLDGSIMDNSGNPP--FHG------------------ 666
KA+ LN L++G + L VQ + N + P + G
Sbjct: 255 KALKALNNLQIGDKKLKICKVQGETQQNKKINGKDQPSNYAGSFLASCDLLRIPQVQQML 314
Query: 667 -IPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEV-EEVLEDVRLECARFGSVKSVNV 723
IP+ AL P++V++ N+ L E ++ EE++ED+R EC R+G ++ + +
Sbjct: 315 TIPQSAL----IPSKVVQFLNMC---SIQDLYEDDIFEELMEDIRSECMRYGQIEKIEI 366
>gi|399216439|emb|CCF73127.1| unnamed protein product [Babesia microti strain RI]
Length = 424
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 425 DPVTSTTQK-PLAGI--SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLP-------LS 474
DP ++TT K G S S++LA +D ++ R RRL + N+P L
Sbjct: 22 DPTSNTTTKFSTFGFDSSGSSALAIPAADLDP----EAERRHRRLYIGNVPAGNHNTNLG 77
Query: 475 ASEKALMEFLNNFLLS----SGVQHVHGSLPCIGC-VIQREKGQAFVEFLTAEDASAALC 529
+S+ ++ FLN LL+ +G+ P C E F+E + L
Sbjct: 78 SSQSDIVAFLNGALLTVLSNTGMPATPADTPITKCESFNSENRFCFIELRNVDVTLVCLK 137
Query: 530 CDGCS-------FSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSP-------- 574
DG S ++G+ LKI RP ++V ++ E + ++ P
Sbjct: 138 MDGISLVDSGINYNGNALKISRPSDYVPPSNNELATQMQPT------IQQPPRGFTMALQ 191
Query: 575 -HKIFIGGISRTLSSKMVMEIVCAFGPLK-AYHFEVNEDHEEPCAFIEYVDQLVTPKAIA 632
K+ I I T++ V+E+V FG +K Y + + AF+E+ D + A
Sbjct: 192 VFKLHIQNIPTTMAEDGVLELVKEFGDVKYVYIIKDTTGQHKNTAFVEFKDSVSLEPASK 251
Query: 633 GLNGLKVGGQVLTA 646
L G +V GQ LTA
Sbjct: 252 ALTGKEVEGQSLTA 265
>gi|124360614|gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 257
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 388 KKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKL 447
K+++ +D+AP T P+ S Q AH M+ +T GIS +L+ +
Sbjct: 114 KRTSGFDMAPPATGVTPT---VSGQMPGI-AH-MIQG----ATQNFSPYGISQIGALSLM 164
Query: 448 NVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI 507
V + Q T R RR+ V LP A+E+++ F + +++ G + I
Sbjct: 165 QVQPMTQQAT---RHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYI 221
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKI 542
EK AFVE T E+AS A+ DG F S +
Sbjct: 222 NHEKKFAFVEMRTVEEASNAMALDGIVFEASTFIL 256
>gi|145538137|ref|XP_001454774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422551|emb|CAK87377.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 54/299 (18%)
Query: 460 NRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFL 519
N P + + N+PL+ K L E+ N L++S ++ P K +E
Sbjct: 84 NNPFM-MIISNVPLNVQLKELEEYFNT-LITSLDPKINDR-PIKSIEYGATKSWVVLECS 140
Query: 520 TAEDASAALCCDGCSFSGSI-LKIKRPKEFVE------VASGEAEKSVASVDSVSGIVKD 572
+ E A + D F + +K++RP++F+E GE D+
Sbjct: 141 SKEAKRALVTQDQVQFVNNCKIKVERPRKFLERILNPQARDGELNPEQKQEDNT------ 194
Query: 573 SPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHF----EVNEDHEEPCAFIEYVDQLVTP 628
++++GG+ L + VM+++ +FG K ++ N + + F EY T
Sbjct: 195 ---RLYLGGLPTYLRDEDVMKLIQSFGITKYFNLVKDTTSNTEISKGYCFFEYESAQSTA 251
Query: 629 KAIAGLNGLKVGGQVL--TAVQAVLDGSIMDNSGNPP--FHG------------------ 666
KA+ LN L++G + L VQ + N + P + G
Sbjct: 252 KALKALNNLQIGDRKLKICKVQGETQQNKKINGKDQPSNYAGSFLASCDLLRIPQVQQML 311
Query: 667 -IPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEV-EEVLEDVRLECARFGSVKSVNV 723
IP+ AL P++V++ N+ L E ++ EE++ED+R EC R+G ++ + +
Sbjct: 312 TIPQSAL----IPSKVVQFLNMC---SIQDLYEDDIFEELMEDIRSECVRYGQIEKIEI 363
>gi|325191168|emb|CCA25956.1| Poly(U)bindingsplicing factor PUF60 putative [Albugo laibachii
Nc14]
Length = 454
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 163/399 (40%), Gaps = 76/399 (19%)
Query: 368 RKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAA-----------SS 416
R RR+ + T + I SP + E S P NV + + SS
Sbjct: 34 RHRRSRWESDTEAVIAPSPTSQ---------ELSSSPENVRSLGSSGKKVLNDIVKKLSS 84
Query: 417 NAHEMVSSDP----VTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPM---RRLCVE 469
E S P +T T P I+ + +LA+ N+ S+ T N P+ +RL V
Sbjct: 85 VIQEKTWSSPSKRSITQTALDP--EIAKARALAQANLLSQSLPSTLFN-PIEFAKRLYVG 141
Query: 470 NLPLSASEKALMEFLNNFLLSSGVQHVHGSL-PCIGCVIQREKGQAFVEF---LTAEDAS 525
NL E + N F + + S+ P G R KG F+EF L AE A
Sbjct: 142 NLYYELKED---DIRNVFAPFGAIHSIDLSMEPGTG----RSKGFCFLEFNDVLAAESAV 194
Query: 526 AALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHK-IFIGGISR 584
L +G + + +K+ RP + + S A+V+ +++ P K ++IGG+
Sbjct: 195 QVL--NGSTMANRAIKVGRPHR----GNQNPKDSEAAVNIGKEAIRNVPTKCVYIGGVRT 248
Query: 585 TLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPC----AFIEYVDQLVTPKAIAGLNGLKVG 640
L+S+ + I FG +K E FIE+ D++ AI +NG ++
Sbjct: 249 ELNSRHIESIFAPFGEIKHCVMTAVSSSESGVHRGYGFIEFGDEICAMNAIQHMNGFELA 308
Query: 641 GQVL-----TAVQAVLDGSIMDNSGNPPFHGIP------KHALPLL----KKPTEVLKLK 685
GQ L +AV +++ I ++ H + K P+L K+ L L
Sbjct: 309 GQTLKVGKASAVALLVNLKISNDKVVDGIHSLSDAKQRRKIIEPILELEEKEEQICLCLL 368
Query: 686 NVFNPEGFSSLSELEVEEVLE-DVRLECARFGSVKSVNV 723
N+ P +V+E L +V EC+++G + V +
Sbjct: 369 NLIKPG--------DVDENLRGEVASECSKYGDIAQVVI 399
>gi|429854658|gb|ELA29655.1| splicing factor u2af large subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 559
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 59/260 (22%)
Query: 475 ASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCS 534
ASE + L+ + A+DA+ +G +
Sbjct: 290 ASEATVALALDGITME------------------------------ADDAT-----NGAA 314
Query: 535 FSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEI 594
S ++ I+RPK+++ A + V VS IV D+P+KI I + LS + V E+
Sbjct: 315 GSNGLV-IRRPKDYIVPAVVDDVPYEPGV--VSNIVIDTPNKISIANMPPYLSDEQVTEL 371
Query: 595 VCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD 652
+ +FG LKA+ ++ EE AF EYV+ T AI GLNG+ +G + L +A +
Sbjct: 372 LVSFGELKAFVLVRDKSTEESRGIAFCEYVEPSATDVAIQGLNGMDLGDKKLRVQKASV- 430
Query: 653 GSIMDNSGNPPFHGIPK--HALPLL-------KKPTEVLKLKNVFNPEGFSSLSELEVEE 703
G G+ A+ +L + T VL+L N+ PE + + EE
Sbjct: 431 -------GVTQVAGVEMGVAAMSMLAGTTSTDSEETRVLQLLNMVTPEEL--MDNDDYEE 481
Query: 704 VLEDVRLECARFGSVKSVNV 723
+ EDV EC +FG V V +
Sbjct: 482 IKEDVEEECTKFGKVLDVKI 501
>gi|399216014|emb|CCF72702.1| unnamed protein product [Babesia microti strain RI]
Length = 487
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 37/298 (12%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
+S R R+L + N P + + ++E+ N +L+ G + G+ G +K +E
Sbjct: 129 ESTRFSRQLEISNTPPNIEVEVIIEYFNMAMLAVGGNCLPGNPAIRGKHNSNDKTSITIE 188
Query: 518 FLTAEDASAALCCDGCSFSGSILKIKR----PKEFVEVASGEAEKSVA------------ 561
T E+ S AL +G + G L I R P E++ A +++
Sbjct: 189 MRTLEETSNALQLNGLNLMGKSLSITRVGNCPPEYINKAPPPTVPTISPSILALGVNGLQ 248
Query: 562 SVD-------SVSGIVKDSPH--KIFIGGISRTLSSKMVMEIVCAFGPLKAYH-FEVNED 611
S D +++ +V +P ++ I + T S + +V FG LK F+ +D
Sbjct: 249 SADIKPLLSNAITSLVGGAPKTDRLLILDLPITQSEDQIKSMVEEFGKLKYIQLFKNADD 308
Query: 612 HEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHA 671
IE+VD T + L +++ ++ A A+ I N +
Sbjct: 309 TSAGMCLIEFVD---TNVQVEALQKMRLQYNIILAEDALTKRIIDRNLLRLQMRN--QSE 363
Query: 672 LPLLKKPTEVLKLKNVFNPEGFSSLSEL------EVEEVLEDVRLECARFGSVKSVNV 723
L + PT + ++N+ SS+ + E +EV+ED+R EC G V+ V V
Sbjct: 364 LMKTQIPTRCIIIRNLVTTASVSSVQFMILQNDREYQEVIEDIRAECDLMGQVERVEV 421
>gi|110736516|dbj|BAF00225.1| RRM-containing protein [Arabidopsis thaliana]
Length = 574
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 8 KEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTI 67
K+K + G +L + EGSAARTRP S +EI +RRK K EN+KE+ + + + G +
Sbjct: 6 KQKENRDGHETLVN-EEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAARLLGYDLV 64
Query: 68 ENVSDDHKS 76
E SD H+S
Sbjct: 65 EKASDYHES 73
>gi|110741990|dbj|BAE98934.1| splicing factor like protein [Arabidopsis thaliana]
Length = 341
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 438 ISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVH 497
+ S L++ Q+ R RR+ V L +A+E+++ F + + + G
Sbjct: 213 LPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAG 272
Query: 498 GSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKI 542
+ I EK AFVE + E+AS A+ DG F G+ +K+
Sbjct: 273 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKV 317
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI----QREKGQAFV 516
R R + +PL A+E+ + EF + G + + ++ +R KG +V
Sbjct: 228 RDQRTVFAYQMPLKATERDVYEFFSK----------AGKVRDVRLIMDRNSRRSKGVGYV 277
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPH- 575
EF A A+ + SG +L + +P V V EAEK++ ++ +G P+
Sbjct: 278 EFYDAMSVPMAI-----ALSGQLL-LGQP---VMVKPSEAEKNLVQSNT-TGASGAGPYG 327
Query: 576 ----KIFIGGISRTLSSKMVMEIVCAFGPLKAYH--FEVNEDHEEPCAFIEYVDQLVTPK 629
K+++G + ++ + EI AFGP++ ++ H + F+++ L K
Sbjct: 328 AVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFA-HLEHAK 386
Query: 630 AIAGLNG-LKVGGQVLTAVQAVLD 652
A LNG L++ G+ + V +V D
Sbjct: 387 AAQSLNGKLEIAGRTIK-VSSVTD 409
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI----QREKGQAFV 516
R R + +PL A+E+ + EF + G + + ++ +R KG +V
Sbjct: 228 RDQRTVFAYQMPLKATERDVYEFFSK----------AGKVRDVRLIMDRNSRRSKGVGYV 277
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPH- 575
EF A A+ + SG +L + +P V V EAEK++ ++ +G P+
Sbjct: 278 EFYDAMSVPMAI-----ALSGQLL-LGQP---VMVKPSEAEKNLVQSNT-TGASGAGPYG 327
Query: 576 ----KIFIGGISRTLSSKMVMEIVCAFGPLKAYH--FEVNEDHEEPCAFIEYVDQLVTPK 629
K+++G + ++ + EI AFGP++ ++ H + F+++ L K
Sbjct: 328 AVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFA-HLEHAK 386
Query: 630 AIAGLNG-LKVGGQVLTAVQAVLD 652
A LNG L++ G+ + V +V D
Sbjct: 387 AAQSLNGKLEIAGRTIK-VSSVTD 409
>gi|357155772|ref|XP_003577233.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 446
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 458 QSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVE 517
Q+ R RR+ V LP +A+E+++ + N + + G + I +K AFVE
Sbjct: 198 QATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVE 257
Query: 518 FLTAEDASAALCCDGCSFSGSILK 541
+ E+AS A+ DG F G+ +K
Sbjct: 258 MRSVEEASNAMALDGILFEGAPVK 281
>gi|294878000|ref|XP_002768233.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239870430|gb|EER00951.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 638
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 42/302 (13%)
Query: 439 SVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHG 498
+V +S + + + ++ + + R L + +P S L++ LN+ L++ G + G
Sbjct: 153 TVVSSSSTIKEAFNATLAAERQKIARELYIGQIPPGISAAHLIDVLNDSLMNMGANAMPG 212
Query: 499 SLPCIGCVIQREKGQAFVEFLTAEDASAAL-CCDGCSFS--GSILKIKRPKEFVEVASGE 555
P + + + AFVEF TAE+AS AL +G G +K+ RPK ++ G
Sbjct: 213 R-PIVHGWLGGDGLFAFVEFRTAEEASIALERLNGHQLKSYGVSIKVGRPKGYM----GP 267
Query: 556 AEKSVASVDSVSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKA------------ 603
A + + + G S GGIS + + PLKA
Sbjct: 268 APEDSVNAYTAGGNTASSSSSAIPGGISAAEVASDTSRLCLIGFPLKASEHSIKRALRSA 327
Query: 604 -----YHFEV----NEDHEEPCAFIEYV----DQLVTPKAIAGLNGLKVGGQVLTAVQAV 650
H E+ D + A E V + + K + G+K +++ A+
Sbjct: 328 AKGEIRHLEILKHTWNDEQIVLAVFECVNIEDEHRLKKKGEVEIQGVK--ARIINPKDAI 385
Query: 651 LDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEGFSSLSELEVEEVLEDVRL 710
+ G M+ G+ I K + L P+ VL + N F L ++ ++++D+++
Sbjct: 386 VKG-YMNFDGD-----IMKKGMGLEVVPSRVLVMTN-FAGSVEELLDDINYSDLMDDIKV 438
Query: 711 EC 712
EC
Sbjct: 439 EC 440
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 118/304 (38%), Gaps = 61/304 (20%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
R + V L + + L F + L G V S + +R KG +VEF + E
Sbjct: 293 RSVFVSQLAARLTARDLGYFFEDKL---GENTVMDSRIVTDRISRRSKGIGYVEFRSVEL 349
Query: 524 ASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSPH---KIFIG 580
A+ G G ++I + E +++ G+ +PH ++++G
Sbjct: 350 VDKAIALSGTVVMGLPIQI----QHTEAERNRLHPGDGNLNLPPGV--SAPHGGMQLYVG 403
Query: 581 GISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPC-------AFIEYVDQLVTPKAIAG 633
+ LS + ++ FG L E + H +P AF++Y A+
Sbjct: 404 SLHFNLSESDIKQVFEPFGEL-----EFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQ 458
Query: 634 LNGLKVGGQVLTAVQAVLDGSI-------MDNSGNPPFHGIPKHAL----------PLLK 676
++G ++ G+ L GS +D +G + + AL P
Sbjct: 459 MDGFELAGRTLRVNTVHEKGSARYTQQDSLDEAGGGNLNAASRQALMQKLARIDPTPAKM 518
Query: 677 KP-----------TEVLKLKNVFNPEGFSSLSELEVE---EVLEDVRLEC-ARFGSVKSV 721
+P + + +KN+FNPE E E + ++ EDV+ EC +++G V ++
Sbjct: 519 EPIARPNIPQTMQSRSVLMKNMFNPE-----EETERDWDKDLAEDVKGECESKYGRVLAI 573
Query: 722 NVVK 725
V K
Sbjct: 574 KVEK 577
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI----QREKGQAFV 516
R R + + L A E+ + EF + G + + ++ +R KG ++
Sbjct: 223 RDQRAVFAYQISLKADERDVFEFFSR----------AGKVRDVRLIMDRNSRRSKGVGYI 272
Query: 517 EFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVAS-VDSVSGIVKDSPH 575
EF A+ G G + +K P E E ++ SVA+ + + G
Sbjct: 273 EFYDVMSVPMAIALSGQPLLGQPVMVK-PSE-AEKNLVQSTTSVANGLTGLIGPYSGGAR 330
Query: 576 KIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED-HEEPCAFIEYVDQLVTPKAIAGL 634
K+++G + +++ + + AFG ++ ++E H + F+++ +L + L
Sbjct: 331 KLYVGNLHISITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFA-RLEDARNAQSL 389
Query: 635 NG-LKVGGQVLTAVQAVLDGSIMDNSG 660
NG L++GG+ + V AV D S M G
Sbjct: 390 NGQLEIGGRTIK-VSAVTDQSGMQEFG 415
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 15/191 (7%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
LT+ R R + V+ L + L EF + Q V V R KG +
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDR------VSNRSKGVGY 228
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSP- 574
VEF + AAL G G + V++ E + V + ++ P
Sbjct: 229 VEFKNEDSVQAALQLTGQKLLGIPV-------IVQLTEAEKNRQVRTTETSGHHPNSIPF 281
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED-HEEPCAFIEYVDQLVTPKAIAG 633
H++++G I +++ + + + FG L+ + +++ F+++ D +A+
Sbjct: 282 HRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEK 341
Query: 634 LNGLKVGGQVL 644
+NG + G+ +
Sbjct: 342 MNGFDLAGRPI 352
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 15/191 (7%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
LT+ R R + V+ L + L EF + Q V V R KG +
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDR------VSNRSKGVGY 228
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSP- 574
VEF + AAL G G + V++ E + V + ++ P
Sbjct: 229 VEFKNEDSVQAALQLTGQKLLGIPV-------IVQLTEAEKNRQVRTTETSGHHPNSIPF 281
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED-HEEPCAFIEYVDQLVTPKAIAG 633
H++++G I +++ + + + FG L+ + +++ F+++ D +A+
Sbjct: 282 HRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEK 341
Query: 634 LNGLKVGGQVL 644
+NG + G+ +
Sbjct: 342 MNGFDLAGRPI 352
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 15/191 (7%)
Query: 456 LTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAF 515
LT+ R R + V+ L + L EF + Q V V R KG +
Sbjct: 175 LTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDR------VSNRSKGVGY 228
Query: 516 VEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDSVSGIVKDSP- 574
VEF + AAL G G + V++ E + V + ++ P
Sbjct: 229 VEFKNEDSVQAALQLTGQKLLGIPV-------IVQLTEAEKNRQVRTTETSGHHPNSIPF 281
Query: 575 HKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED-HEEPCAFIEYVDQLVTPKAIAG 633
H++++G I +++ + + + FG L+ + +++ F+++ D +A+
Sbjct: 282 HRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEK 341
Query: 634 LNGLKVGGQVL 644
+NG + G+ +
Sbjct: 342 MNGFDLAGRPI 352
>gi|219521919|ref|NP_001083001.2| U2-associated SR140 protein-like [Danio rerio]
Length = 874
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 236 RKHRNRDDEKNRDKSAAKKVDLGKGHDL--KVSERKEKKESPKSRHGNSRLKRRRSRSRE 293
+K ++DD++ RDK + K+ D K + K ER + ++ KSR R ++ R RSR+
Sbjct: 768 QKEFDKDDQEKRDKHSQKQKDRSKKDERRDKGEERSKTRDKEKSRKSEDR-EKSRGRSRD 826
Query: 294 REDRNRRSLSLSPRAQKRT 312
+EDR R+ S SPR KR+
Sbjct: 827 KEDRRERTKSRSPRKSKRS 845
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVASGEAEKSVASVDS 565
V +R KG +VEF E A+ G G + + V S + EK V +S
Sbjct: 302 VTKRMKGVGYVEFSQKEMVDKAIALSGSVLDG---------QQILVHSIQPEKKVIKSNS 352
Query: 566 VSGIVKDSPHKIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP----CAFIEY 621
+S +I++G I +++ + + I +G + + H +P AFI++
Sbjct: 353 TGSSGGES--RIYVGYIHLSVAEEQIRVIFQPYGDIDFINI-----HTKPGISKYAFIQF 405
Query: 622 VDQLVTPKAIAGLNGLKVGGQVL 644
Q +AI LNG ++ G+ L
Sbjct: 406 KTQESAKRAITELNGYELMGKNL 428
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.126 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,817,313,619
Number of Sequences: 23463169
Number of extensions: 641813834
Number of successful extensions: 2589222
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3897
Number of HSP's successfully gapped in prelim test: 28489
Number of HSP's that attempted gapping in prelim test: 2169435
Number of HSP's gapped (non-prelim): 188957
length of query: 967
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 814
effective length of database: 8,769,330,510
effective search space: 7138235035140
effective search space used: 7138235035140
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 82 (36.2 bits)