Query 002094
Match_columns 967
No_of_seqs 969 out of 6667
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 12:06:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002094.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002094hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.1E-76 1.1E-80 727.3 38.5 546 22-578 7-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.6E-58 9E-63 567.5 31.0 467 68-544 199-742 (768)
3 4eco_A Uncharacterized protein 100.0 4.5E-59 1.5E-63 561.1 22.2 483 25-544 28-601 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 1.4E-57 4.7E-62 555.4 31.8 473 25-543 267-864 (876)
5 1ziw_A TOLL-like receptor 3; i 100.0 4.1E-56 1.4E-60 543.5 37.2 510 56-571 3-627 (680)
6 3t6q_A CD180 antigen; protein- 100.0 1.9E-55 6.5E-60 530.2 37.6 506 59-571 14-565 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-55 4.9E-60 548.8 36.8 495 57-572 14-566 (844)
8 3t6q_A CD180 antigen; protein- 100.0 1.9E-55 6.4E-60 530.3 30.5 482 73-565 16-535 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3.7E-55 1.3E-59 527.7 31.6 505 55-573 5-565 (606)
10 1ziw_A TOLL-like receptor 3; i 100.0 1.4E-52 4.9E-57 512.1 39.1 481 69-555 49-635 (680)
11 3j0a_A TOLL-like receptor 5; m 100.0 9.3E-53 3.2E-57 523.5 36.1 488 68-577 47-590 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-51 4.3E-56 496.9 30.5 471 68-555 55-570 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 3.7E-51 1.3E-55 489.4 27.6 473 68-552 27-540 (570)
14 4gt4_A Tyrosine-protein kinase 100.0 1.8E-51 6E-56 444.1 19.7 257 685-957 29-305 (308)
15 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-51 5.5E-56 442.5 18.7 260 683-959 14-290 (299)
16 3omv_A RAF proto-oncogene seri 100.0 8E-51 2.7E-55 436.6 23.6 262 684-960 38-302 (307)
17 4aoj_A High affinity nerve gro 100.0 5.6E-51 1.9E-55 444.5 21.8 259 684-959 43-320 (329)
18 2z81_A CD282 antigen, TOLL-lik 100.0 9.9E-50 3.4E-54 474.5 29.7 478 56-548 3-515 (549)
19 4eco_A Uncharacterized protein 100.0 4.2E-50 1.5E-54 483.0 22.0 437 93-569 81-603 (636)
20 2z63_A TOLL-like receptor 4, v 100.0 5.4E-49 1.8E-53 470.7 28.2 465 93-571 28-536 (570)
21 4ecn_A Leucine-rich repeat pro 100.0 4E-49 1.4E-53 480.9 25.0 460 93-567 323-865 (876)
22 4ase_A Vascular endothelial gr 100.0 2.9E-49 9.9E-54 434.4 17.8 267 681-962 63-351 (353)
23 2z7x_B TOLL-like receptor 1, v 100.0 7.9E-49 2.7E-53 463.2 22.7 457 72-551 3-489 (520)
24 2z81_A CD282 antigen, TOLL-lik 100.0 3E-48 1E-52 461.7 27.3 478 74-570 10-514 (549)
25 4b9d_A Serine/threonine-protei 100.0 4.6E-49 1.6E-53 428.6 16.8 251 682-951 24-276 (350)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 9.4E-49 3.2E-53 418.9 16.1 248 683-950 33-283 (311)
27 4fih_A Serine/threonine-protei 100.0 2.9E-48 1E-52 421.6 18.9 248 683-951 75-323 (346)
28 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-48 7.1E-53 421.6 17.4 255 683-960 59-318 (336)
29 3fpq_A Serine/threonine-protei 100.0 4.6E-48 1.6E-52 412.1 18.3 246 684-951 28-282 (290)
30 3hyh_A Carbon catabolite-derep 100.0 1E-47 3.6E-52 405.6 20.5 247 682-951 13-262 (275)
31 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-47 9.5E-52 450.0 25.0 456 96-571 3-486 (520)
32 4fie_A Serine/threonine-protei 100.0 4E-47 1.4E-51 422.8 20.2 249 682-951 151-400 (423)
33 3hmm_A TGF-beta receptor type- 100.0 4.3E-47 1.5E-51 411.4 19.3 260 684-959 5-298 (303)
34 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-45 5.5E-50 446.7 34.6 491 69-571 52-585 (635)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-47 6E-52 409.4 14.4 242 683-946 25-271 (304)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.7E-46 9.1E-51 445.3 20.9 458 72-551 34-518 (562)
37 4g31_A Eukaryotic translation 100.0 3.8E-46 1.3E-50 401.5 17.0 247 684-951 7-279 (299)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2E-44 6.9E-49 429.0 24.7 457 94-571 32-515 (562)
39 1ogq_A PGIP-2, polygalacturona 100.0 5.4E-44 1.8E-48 391.3 20.8 296 23-324 2-306 (313)
40 3v47_A TOLL-like receptor 5B a 100.0 3.5E-43 1.2E-47 407.8 28.3 366 142-549 30-414 (455)
41 3v47_A TOLL-like receptor 5B a 100.0 3.7E-43 1.3E-47 407.5 27.6 375 93-523 30-412 (455)
42 4f9c_A Cell division cycle 7-r 100.0 2E-43 6.7E-48 391.1 20.2 262 681-951 20-352 (361)
43 4b99_A Mitogen-activated prote 100.0 1.5E-43 5E-48 396.1 17.9 264 682-951 54-344 (398)
44 2qkw_B Protein kinase; three-h 100.0 4.7E-42 1.6E-46 378.5 25.0 278 682-961 39-318 (321)
45 1jl5_A Outer protein YOPM; leu 100.0 4.6E-42 1.6E-46 394.7 23.0 384 69-544 11-410 (454)
46 3v5w_A G-protein coupled recep 100.0 3.4E-42 1.2E-46 399.6 19.9 250 682-951 189-449 (689)
47 3uim_A Brassinosteroid insensi 100.0 8.3E-42 2.8E-46 377.5 20.1 275 680-956 28-309 (326)
48 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-40 4E-45 404.0 31.8 471 70-555 77-592 (635)
49 1jl5_A Outer protein YOPM; leu 100.0 3.1E-41 1.1E-45 387.8 23.9 384 68-548 33-434 (454)
50 2psq_A Fibroblast growth facto 100.0 3.3E-41 1.1E-45 378.2 20.4 262 682-959 81-365 (370)
51 3uto_A Twitchin; kinase, muscl 100.0 2.3E-41 8E-46 397.5 18.6 251 682-951 157-410 (573)
52 3p86_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 367.5 18.9 265 682-964 37-304 (309)
53 3bz5_A Internalin-J, INLJ; leu 100.0 3.7E-40 1.3E-44 379.2 26.8 364 81-549 30-393 (457)
54 3kul_A Ephrin type-A receptor 100.0 1.1E-40 3.7E-45 367.6 20.2 263 682-962 49-317 (325)
55 3cbl_A C-FES, proto-oncogene t 100.0 2.9E-41 1E-45 380.1 15.5 259 682-958 114-374 (377)
56 4hcu_A Tyrosine-protein kinase 100.0 2.1E-40 7.3E-45 355.4 20.2 256 682-958 10-266 (269)
57 3s95_A LIMK-1, LIM domain kina 100.0 3.7E-40 1.3E-44 361.5 21.3 263 682-961 10-285 (310)
58 2nru_A Interleukin-1 receptor- 100.0 1.4E-39 4.9E-44 356.4 25.8 281 672-958 16-306 (307)
59 2qol_A Ephrin receptor; recept 100.0 2.1E-40 7.3E-45 371.8 19.5 260 682-959 45-310 (373)
60 1qcf_A Haematopoetic cell kina 100.0 2.9E-40 9.8E-45 381.3 19.5 262 682-964 188-450 (454)
61 3sxs_A Cytoplasmic tyrosine-pr 100.0 4E-40 1.4E-44 353.1 19.0 258 682-960 8-266 (268)
62 3zgw_A Maternal embryonic leuc 100.0 3.7E-40 1.3E-44 364.6 19.0 251 682-952 10-261 (347)
63 3fxz_A Serine/threonine-protei 100.0 1E-39 3.6E-44 354.9 22.2 249 682-951 20-269 (297)
64 1luf_A Muscle-specific tyrosin 100.0 4.2E-40 1.4E-44 366.7 19.4 266 682-963 47-340 (343)
65 3tt0_A Basic fibroblast growth 100.0 5.1E-40 1.7E-44 370.9 20.2 265 682-962 69-356 (382)
66 3vhe_A Vascular endothelial gr 100.0 2.2E-40 7.7E-45 371.4 16.5 264 681-959 21-356 (359)
67 3lb7_A RAF proto-oncogene seri 100.0 2E-39 7E-44 354.3 23.6 265 682-961 36-303 (307)
68 3soc_A Activin receptor type-2 100.0 6.9E-40 2.4E-44 360.9 19.9 267 682-958 24-318 (322)
69 3fe3_A MAP/microtubule affinit 100.0 8.5E-40 2.9E-44 359.8 20.4 248 683-952 16-265 (328)
70 3gen_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 352.5 20.5 256 682-958 24-280 (283)
71 3tki_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 360.9 18.6 255 682-952 7-262 (323)
72 3l9p_A Anaplastic lymphoma kin 100.0 2.9E-40 9.9E-45 370.3 16.1 262 682-959 71-346 (367)
73 2ivs_A Proto-oncogene tyrosine 100.0 6.7E-40 2.3E-44 360.2 18.6 261 682-958 23-311 (314)
74 3poz_A Epidermal growth factor 100.0 6.4E-40 2.2E-44 362.1 18.1 258 682-958 15-278 (327)
75 4eqm_A Protein kinase; transfe 100.0 7.9E-40 2.7E-44 355.5 18.3 268 682-965 11-282 (294)
76 1opk_A P150, C-ABL, proto-onco 100.0 4.7E-40 1.6E-44 383.0 17.4 259 683-961 221-481 (495)
77 1rjb_A FL cytokine receptor; k 100.0 7.6E-40 2.6E-44 364.7 17.5 266 682-962 45-338 (344)
78 3lxp_A Non-receptor tyrosine-p 100.0 2.8E-40 9.4E-45 363.6 13.3 276 683-963 32-315 (318)
79 3ugc_A Tyrosine-protein kinase 100.0 1.6E-40 5.5E-45 361.6 10.9 273 682-961 10-294 (295)
80 1t46_A HOMO sapiens V-KIT hard 100.0 1.5E-39 5.2E-44 357.3 18.5 263 682-959 23-308 (313)
81 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.6E-40 3.3E-44 376.4 17.8 262 682-964 184-446 (452)
82 1o6v_A Internalin A; bacterial 100.0 2.4E-38 8.2E-43 367.4 29.2 346 91-544 44-389 (466)
83 4e5w_A Tyrosine-protein kinase 100.0 5.5E-40 1.9E-44 358.8 14.2 271 682-958 21-302 (302)
84 2pvf_A Fibroblast growth facto 100.0 1.5E-39 5.2E-44 360.4 18.0 263 682-960 35-320 (334)
85 2id5_A Lingo-1, leucine rich r 100.0 6.7E-39 2.3E-43 373.8 23.9 330 191-572 33-362 (477)
86 1o6v_A Internalin A; bacterial 100.0 3E-38 1E-42 366.6 29.0 345 141-567 45-389 (466)
87 4euu_A Serine/threonine-protei 100.0 8E-39 2.7E-43 352.3 22.9 272 682-957 9-308 (319)
88 3t9t_A Tyrosine-protein kinase 100.0 3.2E-39 1.1E-43 345.9 19.2 256 682-958 8-264 (267)
89 1mp8_A Focal adhesion kinase 1 100.0 2.7E-39 9.2E-44 349.2 18.3 257 682-958 15-276 (281)
90 3kex_A Receptor tyrosine-prote 100.0 1.2E-39 4E-44 359.7 15.7 257 683-958 14-276 (325)
91 1o6l_A RAC-beta serine/threoni 100.0 8.3E-39 2.8E-43 352.8 22.4 248 682-951 5-260 (337)
92 3og7_A AKAP9-BRAF fusion prote 100.0 4.8E-39 1.6E-43 348.7 19.7 263 682-959 24-289 (289)
93 3qup_A Tyrosine-protein kinase 100.0 2.7E-39 9.1E-44 356.9 17.8 263 682-960 23-300 (323)
94 3niz_A Rhodanese family protei 100.0 4.7E-39 1.6E-43 352.2 19.6 263 682-951 21-300 (311)
95 3lzb_A Epidermal growth factor 100.0 4.7E-39 1.6E-43 354.8 19.5 259 682-959 15-279 (327)
96 2yab_A Death-associated protei 100.0 5.9E-39 2E-43 357.3 20.4 252 681-951 11-272 (361)
97 1k9a_A Carboxyl-terminal SRC k 100.0 4E-39 1.4E-43 371.0 19.7 252 682-959 193-446 (450)
98 3kfa_A Tyrosine-protein kinase 100.0 1.3E-39 4.4E-44 353.2 14.3 259 682-960 13-273 (288)
99 4f0f_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 343.5 23.5 254 682-956 19-287 (287)
100 3kmu_A ILK, integrin-linked ki 100.0 9.3E-39 3.2E-43 343.1 20.4 253 683-958 11-270 (271)
101 3c1x_A Hepatocyte growth facto 100.0 4E-39 1.4E-43 360.9 18.1 262 684-963 91-360 (373)
102 2c30_A Serine/threonine-protei 100.0 2.8E-38 9.5E-43 347.6 24.5 248 684-952 47-295 (321)
103 3f66_A Hepatocyte growth facto 100.0 8.7E-39 3E-43 348.5 20.1 264 682-963 25-296 (298)
104 1ob3_A PFPK5, cell division co 100.0 1.4E-38 4.9E-43 344.8 21.6 262 683-951 3-280 (288)
105 2xir_A Vascular endothelial gr 100.0 3.8E-39 1.3E-43 354.6 17.3 267 681-962 26-314 (316)
106 2i1m_A Macrophage colony-stimu 100.0 1.8E-39 6.2E-44 359.9 14.7 263 682-959 46-327 (333)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 9.3E-39 3.2E-43 349.4 19.9 255 683-962 9-267 (307)
108 1mqb_A Ephrin type-A receptor 100.0 9.7E-39 3.3E-43 353.4 20.2 263 683-963 45-314 (333)
109 1qpc_A LCK kinase; alpha beta 100.0 4.1E-39 1.4E-43 347.4 16.7 262 682-964 13-275 (279)
110 1u59_A Tyrosine-protein kinase 100.0 5.1E-39 1.8E-43 348.1 17.5 258 687-963 15-277 (287)
111 1p4o_A Insulin-like growth fac 100.0 4.2E-39 1.4E-43 355.2 17.0 263 681-959 24-300 (322)
112 2h8h_A Proto-oncogene tyrosine 100.0 3.7E-39 1.3E-43 378.8 17.0 262 682-964 267-529 (535)
113 3pls_A Macrophage-stimulating 100.0 1.7E-38 5.8E-43 346.3 21.0 264 684-964 23-293 (298)
114 3o0g_A Cell division protein k 100.0 2.3E-38 8E-43 343.9 21.8 263 683-951 3-282 (292)
115 3q4u_A Activin receptor type-1 100.0 1.2E-38 4E-43 348.0 19.5 262 682-956 8-300 (301)
116 1tki_A Titin; serine kinase, m 100.0 1.2E-38 4.2E-43 350.1 19.2 250 682-951 5-257 (321)
117 3lxl_A Tyrosine-protein kinase 100.0 2E-39 6.8E-44 358.4 12.6 277 682-962 23-307 (327)
118 3soa_A Calcium/calmodulin-depe 100.0 3.1E-38 1E-42 360.8 22.8 253 681-951 10-267 (444)
119 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.3E-39 2.8E-43 352.4 17.4 247 682-951 9-258 (336)
120 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-38 6.1E-43 348.8 19.9 265 682-951 5-293 (317)
121 2y0a_A Death-associated protei 100.0 1.4E-38 4.9E-43 350.7 19.1 251 682-951 11-271 (326)
122 3dtc_A Mitogen-activated prote 100.0 1.2E-38 4.1E-43 342.2 17.8 250 683-956 8-271 (271)
123 3o6n_A APL1; leucine-rich repe 100.0 7.6E-38 2.6E-42 354.7 25.3 335 117-571 45-379 (390)
124 2yex_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 339.6 21.4 254 682-951 7-261 (276)
125 3dbq_A Dual specificity protei 100.0 1.3E-38 4.4E-43 354.1 18.4 253 682-952 9-274 (343)
126 4eut_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 360.7 19.0 274 682-959 9-310 (396)
127 3qd2_B Eukaryotic translation 100.0 9.9E-39 3.4E-43 353.9 17.3 251 683-951 7-325 (332)
128 2ozo_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43 378.8 20.1 253 689-960 343-600 (613)
129 1csn_A Casein kinase-1; phosph 100.0 4.2E-38 1.4E-42 343.2 21.8 265 682-963 10-288 (298)
130 4fr4_A YANK1, serine/threonine 100.0 3.5E-38 1.2E-42 352.8 21.6 251 682-951 15-271 (384)
131 2zv2_A Calcium/calmodulin-depe 100.0 2E-38 7E-43 345.5 19.2 250 682-951 13-292 (298)
132 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.6E-39 2.9E-43 355.1 16.5 243 682-946 23-269 (353)
133 3brb_A Proto-oncogene tyrosine 100.0 1.7E-38 5.8E-43 348.8 18.6 263 682-960 34-310 (313)
134 1fot_A TPK1 delta, CAMP-depend 100.0 3E-38 1E-42 345.8 20.3 244 683-951 7-258 (318)
135 2bdw_A Hypothetical protein K1 100.0 2.6E-38 9E-43 353.3 20.1 252 682-952 29-285 (362)
136 3cc6_A Protein tyrosine kinase 100.0 1.3E-38 4.4E-43 343.9 17.0 257 682-958 12-273 (281)
137 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-38 8E-43 352.2 19.0 249 682-951 53-305 (349)
138 4dc2_A Protein kinase C IOTA t 100.0 2.3E-38 7.7E-43 355.5 18.9 249 682-946 52-307 (396)
139 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-37 4E-42 358.3 25.3 356 68-528 41-396 (457)
140 2zmd_A Dual specificity protei 100.0 3.6E-38 1.2E-42 355.9 20.5 253 682-952 56-321 (390)
141 3op5_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 355.5 18.5 272 682-962 35-333 (364)
142 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.1E-38 1.4E-42 349.5 20.4 244 683-951 42-293 (350)
143 2yfx_A Tyrosine-protein kinase 100.0 2E-38 6.7E-43 350.5 17.5 262 681-958 29-304 (327)
144 3uc3_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 353.1 18.5 253 682-952 20-275 (361)
145 1fvr_A Tyrosine-protein kinase 100.0 3.8E-38 1.3E-42 348.2 18.7 260 682-960 25-302 (327)
146 4fvq_A Tyrosine-protein kinase 100.0 1.7E-38 6E-43 344.5 15.8 255 682-962 8-279 (289)
147 2izr_A Casein kinase I isoform 100.0 6.8E-38 2.3E-42 346.5 20.5 260 682-959 9-282 (330)
148 3c0i_A Peripheral plasma membr 100.0 3.6E-38 1.2E-42 351.2 18.3 254 682-951 24-286 (351)
149 1kob_A Twitchin; kinase, intra 100.0 8E-38 2.8E-42 351.3 21.0 251 682-951 51-304 (387)
150 2eue_A Carbon catabolite derep 100.0 8.3E-38 2.8E-42 336.4 20.3 246 683-951 14-262 (275)
151 3a8x_A Protein kinase C IOTA t 100.0 7.3E-38 2.5E-42 347.0 20.2 248 683-946 10-264 (345)
152 3gni_B Strad alpha; kinase fol 100.0 6E-38 2.1E-42 355.3 20.0 269 682-952 25-334 (389)
153 1xbb_A Tyrosine-protein kinase 100.0 5.3E-38 1.8E-42 340.9 18.5 256 683-958 17-279 (291)
154 4aw2_A Serine/threonine-protei 100.0 2.2E-38 7.7E-43 360.4 16.2 253 682-951 74-338 (437)
155 2i0e_A Protein kinase C-beta I 100.0 7.7E-38 2.6E-42 347.2 20.1 248 682-951 20-276 (353)
156 1xjd_A Protein kinase C, theta 100.0 2.3E-38 8E-43 350.1 15.7 247 682-950 17-268 (345)
157 2y94_A 5'-AMP-activated protei 100.0 9.7E-38 3.3E-42 358.8 21.0 247 683-951 17-266 (476)
158 2x4f_A Myosin light chain kina 100.0 6.1E-38 2.1E-42 351.6 18.8 246 687-951 94-342 (373)
159 3a62_A Ribosomal protein S6 ki 100.0 9.2E-38 3.1E-42 344.5 19.7 248 682-951 17-276 (327)
160 3v8s_A RHO-associated protein 100.0 2.2E-38 7.4E-43 357.8 14.8 254 682-952 69-330 (410)
161 2h34_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 340.9 20.2 265 682-964 34-302 (309)
162 3oja_B Anopheles plasmodium-re 100.0 3E-37 1E-41 369.2 25.2 334 117-570 51-384 (597)
163 1byg_A CSK, protein (C-termina 100.0 3.7E-38 1.3E-42 339.7 15.7 251 682-958 21-273 (278)
164 4fl3_A Tyrosine-protein kinase 100.0 6.6E-38 2.3E-42 374.1 19.1 252 687-958 374-631 (635)
165 4agu_A Cyclin-dependent kinase 100.0 9.4E-38 3.2E-42 342.6 18.9 262 683-951 4-284 (311)
166 3p1a_A MYT1 kinase, membrane-a 100.0 3.6E-38 1.2E-42 345.3 15.6 245 682-951 57-304 (311)
167 2id5_A Lingo-1, leucine rich r 100.0 3.7E-37 1.3E-41 359.1 25.0 319 121-495 15-333 (477)
168 2v62_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 350.1 16.4 271 682-962 37-332 (345)
169 3is5_A Calcium-dependent prote 100.0 1.4E-37 4.8E-42 336.3 19.8 252 682-951 22-278 (285)
170 2r5t_A Serine/threonine-protei 100.0 7E-38 2.4E-42 349.9 17.8 248 682-951 38-289 (373)
171 2buj_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 343.1 18.8 270 681-964 28-312 (317)
172 3kn6_A Ribosomal protein S6 ki 100.0 8E-38 2.7E-42 344.4 17.5 250 685-951 14-270 (325)
173 3mdy_A Bone morphogenetic prot 100.0 2.7E-37 9.2E-42 343.2 21.9 263 680-961 35-334 (337)
174 2wqm_A Serine/threonine-protei 100.0 9.7E-38 3.3E-42 342.2 18.1 266 682-962 32-301 (310)
175 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-38 6E-43 350.6 12.1 272 682-960 41-324 (326)
176 3dls_A PAS domain-containing s 100.0 7.5E-38 2.6E-42 346.1 16.9 245 680-952 22-275 (335)
177 3ork_A Serine/threonine protei 100.0 4E-38 1.4E-42 345.3 14.1 261 682-958 12-281 (311)
178 3fdn_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 335.5 18.1 247 682-952 9-258 (279)
179 1u5q_A Serine/threonine protei 100.0 1E-37 3.5E-42 346.5 17.5 247 683-952 55-306 (348)
180 2acx_A G protein-coupled recep 100.0 1.5E-37 5.1E-42 361.4 19.6 251 682-951 184-444 (576)
181 2a2a_A Death-associated protei 100.0 1.6E-37 5.6E-42 342.0 18.9 251 682-951 12-272 (321)
182 3gxj_A TGF-beta receptor type- 100.0 8.2E-39 2.8E-43 349.7 8.4 262 682-961 3-300 (303)
183 3g2f_A Bone morphogenetic prot 100.0 4.3E-38 1.5E-42 349.3 14.3 273 682-963 13-323 (336)
184 3a7i_A MST3 kinase, serine/thr 100.0 2.3E-37 7.9E-42 338.1 19.5 250 681-952 21-271 (303)
185 3kk8_A Calcium/calmodulin depe 100.0 3E-37 1E-41 333.8 20.1 251 682-951 6-261 (284)
186 2vd5_A DMPK protein; serine/th 100.0 5.6E-38 1.9E-42 354.6 14.8 255 682-951 61-327 (412)
187 3f3z_A Calcium/calmodulin-depe 100.0 4.2E-37 1.5E-41 331.3 20.9 246 681-951 8-261 (277)
188 3cok_A Serine/threonine-protei 100.0 2.7E-37 9.2E-42 333.0 19.2 249 682-951 11-262 (278)
189 4ejn_A RAC-alpha serine/threon 100.0 1.2E-37 4.1E-42 358.9 17.4 248 682-951 148-404 (446)
190 3mtl_A Cell division protein k 100.0 5.9E-38 2E-42 345.8 14.1 262 683-951 3-281 (324)
191 2a19_B Interferon-induced, dou 100.0 5E-38 1.7E-42 339.9 13.2 253 682-964 11-280 (284)
192 3g33_A Cell division protein k 100.0 3.5E-37 1.2E-41 337.4 20.0 263 681-951 8-296 (308)
193 2clq_A Mitogen-activated prote 100.0 5.6E-37 1.9E-41 333.7 21.2 251 685-951 25-278 (295)
194 4aaa_A Cyclin-dependent kinase 100.0 1.4E-37 4.7E-42 344.2 16.5 264 682-951 25-306 (331)
195 3oz6_A Mitogen-activated prote 100.0 2.1E-37 7.3E-42 350.5 18.3 265 681-952 8-329 (388)
196 1b6c_B TGF-B superfamily recep 100.0 5E-37 1.7E-41 341.7 20.8 264 678-959 38-337 (342)
197 2jii_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 349.8 13.5 266 682-961 42-339 (352)
198 3llt_A Serine/threonine kinase 100.0 4.4E-37 1.5E-41 344.6 20.1 258 682-951 35-355 (360)
199 3uzp_A CKI-delta, CKID, casein 100.0 3.8E-37 1.3E-41 335.2 18.9 265 682-963 9-285 (296)
200 3bhy_A Death-associated protei 100.0 3.4E-37 1.2E-41 333.2 18.4 259 682-959 5-275 (283)
201 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.4E-37 8.2E-42 341.7 17.4 263 681-951 33-318 (329)
202 2vwi_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 339.9 15.1 264 682-951 15-287 (303)
203 2ac3_A MAP kinase-interacting 100.0 7.5E-37 2.6E-41 336.2 21.0 255 683-951 13-295 (316)
204 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-37 1.1E-41 346.1 18.2 253 682-959 65-340 (365)
205 4hgt_A Casein kinase I isoform 100.0 6E-37 2.1E-41 333.6 19.4 263 681-960 8-282 (296)
206 3hko_A Calcium/calmodulin-depe 100.0 2.9E-37 1E-41 344.0 17.2 267 681-959 25-340 (345)
207 1u46_A ACK-1, activated CDC42 100.0 1.4E-37 4.9E-42 337.6 14.3 261 682-960 18-286 (291)
208 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-37 6.3E-42 343.3 15.4 250 682-951 22-277 (342)
209 3lm5_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 338.7 18.9 254 682-952 28-288 (327)
210 2h6d_A 5'-AMP-activated protei 100.0 6.8E-37 2.3E-41 329.5 19.1 248 683-952 12-262 (276)
211 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-37 7.6E-42 345.4 15.8 256 682-953 54-323 (355)
212 1t4h_A Serine/threonine-protei 100.0 6.3E-37 2.1E-41 332.3 18.9 247 683-951 27-282 (290)
213 3i6u_A CDS1, serine/threonine- 100.0 2.5E-37 8.7E-42 352.5 16.5 254 680-951 133-399 (419)
214 3eqc_A Dual specificity mitoge 100.0 4.8E-37 1.7E-41 344.2 18.2 260 682-951 33-324 (360)
215 1x8b_A WEE1HU, WEE1-like prote 100.0 5.2E-37 1.8E-41 332.8 17.8 246 682-951 11-279 (289)
216 2rku_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 333.6 17.9 249 682-952 15-266 (294)
217 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.1E-37 2.4E-41 355.2 20.0 250 682-946 185-438 (543)
218 2vgo_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 331.2 18.3 254 682-959 14-272 (284)
219 3mi9_A Cell division protein k 100.0 1.2E-36 4.2E-41 339.6 21.1 265 682-951 17-311 (351)
220 3fme_A Dual specificity mitoge 100.0 3.2E-37 1.1E-41 334.7 15.8 253 682-951 7-266 (290)
221 1ua2_A CAK, cell division prot 100.0 1.2E-36 4E-41 338.8 20.6 264 682-952 10-292 (346)
222 3an0_A Dual specificity mitoge 100.0 1.8E-37 6.3E-42 344.8 14.1 252 683-951 52-310 (340)
223 3nsz_A CK II alpha, casein kin 100.0 1.6E-36 5.5E-41 335.7 21.4 256 682-951 36-319 (330)
224 1nxk_A MAP kinase-activated pr 100.0 5E-37 1.7E-41 347.6 17.6 244 687-952 67-322 (400)
225 3rp9_A Mitogen-activated prote 100.0 1.3E-36 4.4E-41 352.0 21.2 266 682-951 53-396 (458)
226 2owb_A Serine/threonine-protei 100.0 7.2E-37 2.5E-41 338.8 17.9 249 681-951 40-291 (335)
227 2jam_A Calcium/calmodulin-depe 100.0 1.5E-36 5E-41 331.8 20.1 249 682-951 9-261 (304)
228 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.2E-37 1.1E-41 339.7 14.8 260 682-960 33-304 (319)
229 3ll6_A Cyclin G-associated kin 100.0 3E-37 1E-41 342.8 14.6 257 683-959 29-309 (337)
230 2r3i_A Cell division protein k 100.0 2.4E-36 8.2E-41 329.4 21.5 264 683-951 4-283 (299)
231 2w5a_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 333.9 13.1 255 682-954 6-270 (279)
232 4e7w_A Glycogen synthase kinas 100.0 5.5E-37 1.9E-41 347.0 16.6 261 682-952 40-322 (394)
233 2j0j_A Focal adhesion kinase 1 100.0 7.9E-37 2.7E-41 366.2 18.7 257 682-958 390-651 (656)
234 3mwu_A Calmodulin-domain prote 100.0 1.7E-36 5.8E-41 353.4 21.0 251 682-952 22-277 (486)
235 3ttj_A Mitogen-activated prote 100.0 2E-36 6.7E-41 348.9 21.2 258 682-951 62-355 (464)
236 2y7j_A Phosphorylase B kinase 100.0 3.2E-36 1.1E-40 337.2 22.2 256 678-951 90-359 (365)
237 3com_A Serine/threonine-protei 100.0 2.4E-36 8.2E-41 331.8 20.7 253 678-951 25-278 (314)
238 3lij_A Calcium/calmodulin depe 100.0 1.9E-36 6.4E-41 353.6 21.0 250 682-951 37-291 (494)
239 1cm8_A Phosphorylated MAP kina 100.0 1.1E-36 3.8E-41 341.0 18.3 258 682-951 25-307 (367)
240 3nyv_A Calmodulin-domain prote 100.0 1.1E-36 3.9E-41 355.1 18.7 250 682-951 26-281 (484)
241 3n9x_A Phosphotransferase; mal 100.0 1.7E-36 5.7E-41 347.5 19.7 266 682-951 26-361 (432)
242 3cek_A Dual specificity protei 100.0 1.5E-36 5.1E-41 333.2 18.5 253 682-952 28-293 (313)
243 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-36 3.7E-41 339.9 17.3 264 682-951 31-322 (348)
244 3q5i_A Protein kinase; CDPK, m 100.0 2.2E-36 7.7E-41 353.8 20.8 251 681-951 35-301 (504)
245 2wtk_C Serine/threonine-protei 100.0 3.9E-36 1.3E-40 328.7 21.2 253 682-952 5-264 (305)
246 3qyz_A Mitogen-activated prote 100.0 4.8E-36 1.7E-40 336.3 22.0 262 683-951 28-313 (364)
247 3sv0_A Casein kinase I-like; t 100.0 5.3E-36 1.8E-40 345.0 22.5 260 682-958 7-278 (483)
248 3byv_A Rhoptry kinase; malaria 100.0 1.8E-37 6.2E-42 349.5 10.1 243 682-951 73-359 (377)
249 2j7t_A Serine/threonine-protei 100.0 1.3E-36 4.6E-41 331.9 16.6 253 681-951 18-275 (302)
250 3q60_A ROP5B; pseudokinase, tr 100.0 4.2E-37 1.4E-41 345.8 12.8 252 684-951 64-352 (371)
251 2ycf_A Serine/threonine-protei 100.0 1E-36 3.4E-41 336.0 15.4 253 681-951 9-274 (322)
252 3eb0_A Putative uncharacterize 100.0 1.9E-36 6.5E-41 342.0 18.0 260 681-951 6-321 (383)
253 2x7f_A TRAF2 and NCK-interacti 100.0 1.9E-36 6.5E-41 334.5 16.7 251 682-951 24-286 (326)
254 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-36 9.4E-41 362.7 19.2 243 682-946 341-587 (674)
255 3kvw_A DYRK2, dual specificity 100.0 1.9E-36 6.3E-41 346.3 16.3 258 682-951 97-408 (429)
256 1zy4_A Serine/threonine-protei 100.0 4.5E-36 1.6E-40 327.8 18.6 252 682-951 6-283 (303)
257 1j1b_A Glycogen synthase kinas 100.0 2.2E-36 7.5E-41 344.9 16.3 264 683-957 55-344 (420)
258 3pg1_A Mitogen-activated prote 100.0 3.6E-36 1.2E-40 337.5 17.3 264 680-951 20-316 (362)
259 1phk_A Phosphorylase kinase; g 100.0 5.3E-36 1.8E-40 326.5 17.9 253 681-951 16-283 (298)
260 3rgf_A Cyclin-dependent kinase 100.0 6.2E-36 2.1E-40 340.4 19.1 263 684-951 22-333 (405)
261 2fst_X Mitogen-activated prote 100.0 1.7E-36 5.9E-41 339.0 14.0 258 682-951 29-311 (367)
262 2xrw_A Mitogen-activated prote 100.0 9.9E-36 3.4E-40 334.4 20.2 258 682-951 25-318 (371)
263 1blx_A Cyclin-dependent kinase 100.0 1E-35 3.5E-40 328.7 19.9 262 682-951 11-296 (326)
264 3e3p_A Protein kinase, putativ 100.0 6.7E-36 2.3E-40 335.1 18.7 271 679-957 20-322 (360)
265 2wei_A Calmodulin-domain prote 100.0 1.1E-35 3.9E-40 321.9 19.4 252 680-951 20-276 (287)
266 4exu_A Mitogen-activated prote 100.0 5.1E-36 1.8E-40 336.7 16.9 258 682-952 42-324 (371)
267 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-35 4.7E-40 331.6 19.7 263 682-951 11-305 (353)
268 1wak_A Serine/threonine-protei 100.0 6.9E-36 2.4E-40 339.9 17.4 260 682-951 37-391 (397)
269 3aln_A Dual specificity mitoge 100.0 1.2E-35 4E-40 328.3 18.3 256 682-951 22-285 (327)
270 2i6l_A Mitogen-activated prote 100.0 2.3E-35 7.9E-40 325.0 19.4 262 682-951 11-305 (320)
271 1z57_A Dual specificity protei 100.0 2.6E-35 8.7E-40 327.4 19.6 264 682-957 14-336 (339)
272 3coi_A Mitogen-activated prote 100.0 2.2E-35 7.4E-40 329.7 19.1 256 683-951 25-305 (353)
273 4fcg_A Uncharacterized protein 100.0 2.2E-35 7.4E-40 324.9 16.9 269 24-298 24-313 (328)
274 3qa8_A MGC80376 protein; kinas 100.0 9.3E-36 3.2E-40 349.1 14.7 269 682-958 14-309 (676)
275 2dyl_A Dual specificity mitoge 100.0 4E-35 1.4E-39 322.8 18.7 251 683-951 26-283 (318)
276 3fhr_A MAP kinase-activated pr 100.0 2.2E-35 7.5E-40 326.8 16.3 250 683-951 29-287 (336)
277 2rio_A Serine/threonine-protei 100.0 2E-35 6.7E-40 338.6 16.1 254 682-951 15-295 (434)
278 3a99_A Proto-oncogene serine/t 100.0 6.7E-36 2.3E-40 328.8 11.2 242 681-951 42-293 (320)
279 2vx3_A Dual specificity tyrosi 100.0 1.3E-34 4.4E-39 326.8 20.5 198 682-889 54-262 (382)
280 4fmz_A Internalin; leucine ric 100.0 6.7E-34 2.3E-38 317.1 25.5 86 454-543 261-346 (347)
281 2iwi_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40 325.6 11.1 242 681-951 30-283 (312)
282 1q8y_A SR protein kinase; tran 100.0 5.4E-35 1.9E-39 329.5 15.9 260 682-951 19-333 (373)
283 4fmz_A Internalin; leucine ric 100.0 1.8E-33 6.2E-38 313.5 27.6 308 161-519 39-346 (347)
284 2eu9_A Dual specificity protei 100.0 1.4E-34 4.9E-39 323.6 18.6 257 682-951 19-333 (355)
285 3p23_A Serine/threonine-protei 100.0 1.3E-34 4.6E-39 330.3 17.9 249 683-951 25-283 (432)
286 3o6n_A APL1; leucine-rich repe 100.0 7.9E-34 2.7E-38 321.7 23.8 314 165-571 44-357 (390)
287 1ogq_A PGIP-2, polygalacturona 100.0 9.7E-35 3.3E-39 317.8 15.3 258 263-575 51-312 (313)
288 3uqc_A Probable conserved tran 100.0 2.5E-34 8.6E-39 310.0 17.0 235 682-961 31-268 (286)
289 3oja_B Anopheles plasmodium-re 100.0 1.5E-33 5.1E-38 337.1 22.6 314 165-571 50-363 (597)
290 2pzi_A Probable serine/threoni 100.0 4.4E-34 1.5E-38 346.4 14.5 239 682-956 80-326 (681)
291 1z7x_W Ribonuclease inhibitor; 100.0 3.4E-36 1.2E-40 349.6 -6.5 385 117-544 3-441 (461)
292 1z7x_W Ribonuclease inhibitor; 100.0 2E-36 6.9E-41 351.6 -9.7 392 92-527 2-448 (461)
293 2ft3_A Biglycan; proteoglycan, 100.0 4.2E-32 1.4E-36 300.2 24.6 289 167-516 34-330 (332)
294 3m2w_A MAP kinase-activated pr 100.0 4.7E-33 1.6E-37 303.1 16.3 221 687-951 23-256 (299)
295 2ft3_A Biglycan; proteoglycan, 100.0 6.5E-32 2.2E-36 298.7 24.1 289 56-368 32-331 (332)
296 1xku_A Decorin; proteoglycan, 100.0 8.4E-32 2.9E-36 297.6 24.4 291 55-368 29-330 (330)
297 3dzo_A Rhoptry kinase domain; 100.0 4.8E-33 1.6E-37 316.6 13.8 240 684-950 80-362 (413)
298 1xku_A Decorin; proteoglycan, 100.0 2.6E-31 8.9E-36 293.7 26.4 290 190-541 31-330 (330)
299 2vuw_A Serine/threonine-protei 100.0 3.8E-33 1.3E-37 309.2 7.6 242 682-950 20-329 (336)
300 3ogk_B Coronatine-insensitive 100.0 6.2E-34 2.1E-38 341.7 -5.3 477 24-540 15-548 (592)
301 2z80_A TOLL-like receptor 2, v 100.0 2.2E-31 7.5E-36 297.1 13.2 283 54-351 27-318 (353)
302 2z66_A Variable lymphocyte rec 100.0 7.4E-31 2.5E-35 286.8 14.7 254 54-324 4-262 (306)
303 4fcg_A Uncharacterized protein 100.0 1.1E-31 3.6E-36 295.4 5.8 289 35-347 21-314 (328)
304 2z80_A TOLL-like receptor 2, v 100.0 1.2E-29 4E-34 283.1 16.1 281 237-547 30-318 (353)
305 2z66_A Variable lymphocyte rec 100.0 6.4E-30 2.2E-34 279.3 13.6 249 96-349 10-263 (306)
306 1wwl_A Monocyte differentiatio 100.0 8.3E-31 2.8E-35 286.7 6.1 250 89-348 39-310 (312)
307 3ogk_B Coronatine-insensitive 100.0 5.2E-32 1.8E-36 325.0 -5.3 406 109-544 65-527 (592)
308 1ozn_A Reticulon 4 receptor; N 100.0 6.8E-29 2.3E-33 268.1 17.9 228 120-351 14-242 (285)
309 1wwl_A Monocyte differentiatio 100.0 1.6E-30 5.5E-35 284.5 5.1 269 46-325 21-311 (312)
310 3zyi_A Leucine-rich repeat-con 100.0 4E-28 1.4E-32 280.2 21.5 231 93-350 75-306 (452)
311 3zyj_A Leucine-rich repeat-con 100.0 4.4E-28 1.5E-32 278.8 21.5 229 93-348 64-293 (440)
312 3zyi_A Leucine-rich repeat-con 100.0 4.6E-28 1.6E-32 279.7 21.4 230 142-373 75-306 (452)
313 3zyj_A Leucine-rich repeat-con 100.0 5.6E-28 1.9E-32 277.9 21.0 238 59-299 45-292 (440)
314 3o53_A Protein LRIM1, AGAP0063 100.0 4.6E-29 1.6E-33 273.5 8.1 266 241-548 13-281 (317)
315 1ozn_A Reticulon 4 receptor; N 100.0 8.6E-28 2.9E-32 259.5 17.9 267 73-344 15-284 (285)
316 3g06_A SSPH2 (leucine-rich rep 100.0 3.1E-28 1.1E-32 287.7 15.6 301 42-434 8-308 (622)
317 2p1m_B Transport inhibitor res 99.9 5.1E-31 1.7E-35 316.5 -10.7 461 56-543 34-544 (594)
318 3o53_A Protein LRIM1, AGAP0063 99.9 6.3E-29 2.1E-33 272.5 4.2 253 75-342 16-270 (317)
319 2o6q_A Variable lymphocyte rec 99.9 8.5E-27 2.9E-31 249.3 19.4 217 55-276 3-219 (270)
320 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-26 8.5E-31 271.5 24.8 88 434-530 221-308 (622)
321 4azs_A Methyltransferase WBDD; 99.9 6.7E-28 2.3E-32 283.3 8.3 186 689-884 241-437 (569)
322 3oja_A Leucine-rich immune mol 99.9 8.1E-28 2.8E-32 279.0 8.9 234 263-538 35-270 (487)
323 3oja_A Leucine-rich immune mol 99.9 1E-27 3.5E-32 278.2 7.3 234 93-341 34-269 (487)
324 2p1m_B Transport inhibitor res 99.9 7.8E-29 2.7E-33 297.5 -4.0 415 96-543 46-519 (594)
325 2z62_A TOLL-like receptor 4, v 99.9 1.8E-25 6.2E-30 240.0 20.0 225 122-351 12-241 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 6.2E-25 2.1E-29 235.8 17.1 207 93-324 28-238 (276)
327 3rfs_A Internalin B, repeat mo 99.9 9E-25 3.1E-29 233.7 16.4 211 89-311 37-247 (272)
328 3rfs_A Internalin B, repeat mo 99.9 2.9E-25 9.8E-30 237.6 11.6 229 92-334 18-246 (272)
329 2o6q_A Variable lymphocyte rec 99.9 5.9E-24 2E-28 227.2 20.7 205 118-350 17-221 (270)
330 1p9a_G Platelet glycoprotein I 99.9 7.9E-24 2.7E-28 228.1 18.0 204 113-348 6-209 (290)
331 2ast_B S-phase kinase-associat 99.9 6.1E-26 2.1E-30 251.4 1.2 264 56-330 36-313 (336)
332 1p9a_G Platelet glycoprotein I 99.9 1.1E-23 3.8E-28 227.0 18.6 206 162-374 6-212 (290)
333 4glp_A Monocyte differentiatio 99.9 5.5E-24 1.9E-28 232.4 15.6 224 118-347 65-307 (310)
334 3goz_A Leucine-rich repeat-con 99.9 4.1E-25 1.4E-29 247.0 5.9 253 98-350 3-300 (362)
335 3m19_A Variable lymphocyte rec 99.9 1.4E-23 4.7E-28 221.7 16.5 191 56-277 4-194 (251)
336 3en9_A Glycoprotease, O-sialog 99.9 1.5E-24 5.1E-29 253.4 8.8 186 686-885 340-538 (540)
337 2ca6_A RAN GTPase-activating p 99.9 2.9E-25 9.9E-30 250.8 1.7 247 85-351 24-320 (386)
338 2xwt_C Thyrotropin receptor; s 99.9 2.2E-23 7.5E-28 218.5 14.6 196 94-296 32-236 (239)
339 4ay9_X Follicle-stimulating ho 99.9 2.4E-23 8.4E-28 231.3 15.5 246 55-320 7-256 (350)
340 3goz_A Leucine-rich repeat-con 99.9 1.9E-24 6.6E-29 241.5 5.8 257 74-331 3-305 (362)
341 2ca6_A RAN GTPase-activating p 99.9 3.6E-25 1.2E-29 250.1 -0.8 268 255-537 25-337 (386)
342 4glp_A Monocyte differentiatio 99.9 1.3E-23 4.5E-28 229.4 11.1 228 91-324 62-308 (310)
343 2ast_B S-phase kinase-associat 99.9 1.6E-24 5.3E-29 240.1 2.9 253 94-354 48-313 (336)
344 2xwt_C Thyrotropin receptor; s 99.9 5.7E-23 1.9E-27 215.3 14.4 211 56-273 9-237 (239)
345 3m19_A Variable lymphocyte rec 99.9 3.2E-22 1.1E-26 211.2 17.4 179 168-349 16-194 (251)
346 3cvr_A Invasion plasmid antige 99.9 2.2E-23 7.5E-28 243.2 8.9 212 44-287 31-255 (571)
347 2o6s_A Variable lymphocyte rec 99.9 2.1E-22 7.3E-27 206.0 14.6 187 54-263 4-190 (208)
348 1h6u_A Internalin H; cell adhe 99.9 2.7E-22 9.2E-27 218.4 15.2 207 98-347 24-230 (308)
349 1h6u_A Internalin H; cell adhe 99.9 4.2E-22 1.4E-26 216.8 15.7 207 75-300 25-231 (308)
350 4ay9_X Follicle-stimulating ho 99.9 3.6E-22 1.2E-26 221.9 13.8 240 96-344 12-256 (350)
351 2o6s_A Variable lymphocyte rec 99.8 6.9E-21 2.4E-25 194.7 16.0 163 142-311 28-190 (208)
352 1zar_A RIO2 kinase; serine kin 99.8 1.1E-21 3.6E-26 209.9 7.2 145 682-856 90-251 (282)
353 3cvr_A Invasion plasmid antige 99.8 1.1E-20 3.6E-25 220.5 13.9 188 94-334 60-254 (571)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 6.9E-21 2.4E-25 196.1 10.1 178 389-570 14-193 (220)
355 2v9t_B SLIT homolog 2 protein 99.8 1.4E-20 4.7E-25 193.9 11.0 158 389-549 14-171 (220)
356 3e6j_A Variable lymphocyte rec 99.8 6.3E-20 2.2E-24 190.3 16.0 158 54-228 16-173 (229)
357 4b8c_D Glucose-repressible alc 99.8 1.5E-21 5.3E-26 236.5 4.2 218 26-256 131-359 (727)
358 1h6t_A Internalin B; cell adhe 99.8 5.4E-20 1.9E-24 198.3 12.0 171 115-300 44-214 (291)
359 2xot_A Amphoterin-induced prot 99.8 9.7E-20 3.3E-24 203.0 14.2 162 386-547 39-206 (361)
360 1h6t_A Internalin B; cell adhe 99.8 7.6E-20 2.6E-24 197.1 12.9 172 139-324 43-214 (291)
361 1m9s_A Internalin B; cell inva 99.8 4.2E-20 1.4E-24 218.1 10.3 106 234-347 105-210 (605)
362 1m9s_A Internalin B; cell inva 99.8 8.6E-20 2.9E-24 215.5 12.1 171 115-300 41-211 (605)
363 2xot_A Amphoterin-induced prot 99.8 2E-19 6.8E-24 200.5 14.2 156 144-299 41-202 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 2.3E-19 7.8E-24 184.8 13.4 113 138-250 53-165 (220)
365 1dce_A Protein (RAB geranylger 99.8 1.4E-21 4.9E-26 229.4 -4.0 217 90-341 346-567 (567)
366 3e6j_A Variable lymphocyte rec 99.8 7.1E-19 2.4E-23 182.4 15.2 156 388-547 21-176 (229)
367 1dce_A Protein (RAB geranylger 99.8 1.2E-21 4.1E-26 230.0 -6.9 90 430-522 459-549 (567)
368 2v9t_B SLIT homolog 2 protein 99.8 6.3E-19 2.1E-23 181.5 13.7 134 142-275 32-165 (220)
369 1xeu_A Internalin C; cellular 99.8 4.3E-19 1.5E-23 188.1 8.3 168 92-275 18-185 (263)
370 4b8c_D Glucose-repressible alc 99.7 5.8E-19 2E-23 213.9 7.8 222 93-346 173-403 (727)
371 1w8a_A SLIT protein; signaling 99.7 8.9E-19 3E-23 176.2 6.4 113 435-547 30-143 (192)
372 4ezg_A Putative uncharacterize 99.7 5.3E-18 1.8E-22 171.5 11.9 153 384-544 42-195 (197)
373 1xeu_A Internalin C; cellular 99.7 2.2E-18 7.6E-23 182.6 9.3 168 141-323 18-185 (263)
374 4ezg_A Putative uncharacterize 99.7 7.9E-18 2.7E-22 170.2 12.7 154 162-323 40-194 (197)
375 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6.3E-22 166.5 12.6 132 389-523 11-143 (192)
376 1zth_A RIO1 serine protein kin 99.7 5.6E-18 1.9E-22 178.9 8.8 138 683-832 48-219 (258)
377 3sb4_A Hypothetical leucine ri 99.7 7.9E-18 2.7E-22 185.1 7.9 291 165-513 24-328 (329)
378 3sb4_A Hypothetical leucine ri 99.7 2.1E-17 7.1E-22 181.7 9.0 85 261-347 225-310 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 2.7E-17 9.4E-22 165.2 8.2 134 414-551 14-147 (193)
380 2ell_A Acidic leucine-rich nuc 99.7 2.3E-16 7.8E-21 155.0 10.6 130 412-543 26-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 2.9E-16 9.8E-21 154.3 10.9 135 385-521 23-162 (168)
382 2o6r_A Variable lymphocyte rec 99.6 6.7E-16 2.3E-20 153.1 12.6 136 54-205 4-139 (177)
383 2je0_A Acidic leucine-rich nuc 99.6 2.9E-16 9.9E-21 150.8 9.6 128 410-539 17-149 (149)
384 4fdw_A Leucine rich hypothetic 99.6 3.8E-15 1.3E-19 167.1 18.4 265 92-370 112-383 (401)
385 2o6r_A Variable lymphocyte rec 99.6 1.1E-15 3.8E-20 151.4 11.8 113 435-547 29-141 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 4.2E-16 1.4E-20 149.7 8.1 129 385-515 16-149 (149)
387 2wfh_A SLIT homolog 2 protein 99.6 1.5E-15 5.1E-20 152.5 12.0 84 143-227 32-115 (193)
388 4fdw_A Leucine rich hypothetic 99.6 5.2E-15 1.8E-19 166.0 17.3 267 115-399 111-383 (401)
389 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-16 4.5E-21 174.0 3.7 138 682-832 95-265 (397)
390 4fs7_A Uncharacterized protein 99.6 2.4E-14 8.3E-19 161.4 20.4 123 404-534 270-392 (394)
391 1ds9_A Outer arm dynein; leuci 99.6 4.5E-17 1.5E-21 164.8 -2.1 138 89-232 14-158 (198)
392 4fs7_A Uncharacterized protein 99.6 2.3E-14 8E-19 161.5 19.7 102 405-511 292-393 (394)
393 1ds9_A Outer arm dynein; leuci 99.5 1.7E-16 5.7E-21 160.5 -3.2 136 113-253 14-155 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 7.7E-15 2.6E-19 145.2 8.7 131 408-544 17-154 (176)
395 3g39_A Variable lymphocyte rec 99.5 9.7E-15 3.3E-19 143.3 8.1 109 436-547 11-119 (170)
396 1a9n_A U2A', U2A'; complex (nu 99.5 1.9E-14 6.7E-19 142.2 9.0 105 191-299 43-153 (176)
397 2r9u_A Variable lymphocyte rec 99.5 9.4E-14 3.2E-18 136.7 11.0 108 437-547 15-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 4.2E-13 1.5E-17 131.5 10.7 107 413-522 12-118 (170)
399 3un9_A NLR family member X1; l 99.4 3E-15 1E-19 166.3 -6.3 171 92-282 71-259 (372)
400 2r9u_A Variable lymphocyte rec 99.4 5.8E-13 2E-17 131.0 10.8 106 413-521 15-120 (174)
401 4gt6_A Cell surface protein; l 99.4 3.1E-11 1.1E-15 135.9 22.7 135 401-542 256-390 (394)
402 3un9_A NLR family member X1; l 99.3 2.5E-14 8.4E-19 158.9 -4.6 158 142-299 72-252 (372)
403 4gt6_A Cell surface protein; l 99.3 2.5E-11 8.4E-16 136.7 19.7 336 105-518 51-390 (394)
404 2ifg_A High affinity nerve gro 99.3 1.8E-12 6.3E-17 143.4 8.2 106 439-547 13-120 (347)
405 2ifg_A High affinity nerve gro 99.2 1.2E-11 4.1E-16 136.8 9.6 130 415-547 13-145 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 7.2E-11 2.5E-15 124.9 8.0 137 684-830 16-212 (263)
407 2ra8_A Uncharacterized protein 99.0 5.4E-11 1.8E-15 130.7 3.5 210 68-297 106-341 (362)
408 2ra8_A Uncharacterized protein 99.0 2.5E-10 8.5E-15 125.4 4.9 63 261-323 251-320 (362)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 7.6E-10 2.6E-14 116.9 8.4 127 689-830 26-213 (264)
410 3dxp_A Putative acyl-COA dehyd 99.0 1.3E-09 4.4E-14 121.0 10.3 140 687-832 43-249 (359)
411 4h09_A Hypothetical leucine ri 99.0 3.5E-08 1.2E-12 110.3 22.0 123 403-529 233-355 (379)
412 4h09_A Hypothetical leucine ri 98.9 2.7E-08 9.3E-13 111.2 20.4 303 185-540 41-343 (379)
413 3rw6_A Nuclear RNA export fact 98.9 1.1E-11 3.7E-16 128.9 -7.5 23 56-78 77-99 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 2.9E-09 1E-13 115.0 4.6 184 687-885 25-287 (304)
415 1io0_A Tropomodulin; LRR prote 98.6 5.7E-09 2E-13 103.4 -0.6 72 84-155 27-106 (185)
416 3rw6_A Nuclear RNA export fact 98.5 2.3E-08 7.9E-13 103.8 2.7 105 430-536 137-257 (267)
417 3r70_A Aminoglycoside phosphot 98.4 3.6E-07 1.2E-11 99.3 9.6 134 683-832 38-238 (320)
418 1io0_A Tropomodulin; LRR prote 98.4 6.7E-08 2.3E-12 95.6 3.3 112 432-543 34-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 2.9E-06 1E-10 89.6 11.0 131 689-830 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.2 4.1E-06 1.4E-10 90.1 11.7 132 688-831 25-224 (306)
421 3d1u_A Putative fructosamine-3 98.2 3.5E-06 1.2E-10 89.4 9.6 77 685-766 18-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 8.8E-06 3E-10 89.6 7.9 139 687-832 46-244 (362)
423 3ats_A Putative uncharacterize 97.9 1.2E-05 4.1E-10 88.7 7.7 81 688-768 26-122 (357)
424 3e4g_A ATP synthase subunit S, 97.9 3.5E-06 1.2E-10 80.9 2.1 63 162-224 81-149 (176)
425 2olc_A MTR kinase, methylthior 97.8 4.5E-05 1.5E-09 85.4 10.6 76 687-764 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.8 8.7E-06 3E-10 78.1 3.5 86 434-519 61-153 (176)
427 2q83_A YTAA protein; 2635576, 97.7 5.7E-05 1.9E-09 82.7 8.9 136 689-830 39-251 (346)
428 3jr1_A Putative fructosamine-3 97.4 0.00057 2E-08 72.9 11.3 135 687-827 41-232 (312)
429 3f7w_A Putative fructosamine-3 97.4 0.00027 9.2E-09 75.1 8.7 77 684-765 17-96 (288)
430 1pgv_A TMD-1, tropomodulin TMD 97.4 2.2E-05 7.6E-10 76.8 -0.7 71 85-155 33-111 (197)
431 2pyw_A Uncharacterized protein 97.3 0.00061 2.1E-08 76.7 10.7 79 799-881 230-312 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00011 3.6E-09 72.0 2.0 65 163-227 38-111 (197)
433 1zyl_A Hypothetical protein YI 97.0 0.0035 1.2E-07 67.8 11.9 139 688-831 32-223 (328)
434 3rfe_A Platelet glycoprotein I 97.0 0.00087 3E-08 61.2 5.9 59 486-546 12-71 (130)
435 3dxq_A Choline/ethanolamine ki 96.9 0.00063 2.2E-08 72.7 5.3 136 687-832 23-203 (301)
436 3csv_A Aminoglycoside phosphot 96.9 0.0015 5E-08 71.0 8.3 32 801-832 183-218 (333)
437 3feg_A Choline/ethanolamine ki 96.7 0.0031 1E-07 69.2 8.2 138 688-831 56-254 (379)
438 2yle_A Protein spire homolog 1 96.6 0.01 3.5E-07 58.1 10.4 101 765-884 34-135 (229)
439 1nw1_A Choline kinase (49.2 KD 96.5 0.0036 1.2E-07 70.2 8.1 72 688-766 79-159 (429)
440 3rfe_A Platelet glycoprotein I 96.5 0.003 1E-07 57.6 5.7 54 97-153 12-66 (130)
441 2ppq_A HSK, HK, homoserine kin 96.4 0.008 2.7E-07 64.7 9.8 139 688-830 28-216 (322)
442 3c5i_A Choline kinase; choline 96.2 0.0042 1.4E-07 68.4 5.7 73 688-766 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 95.9 0.025 8.7E-07 61.2 10.4 31 802-832 207-237 (339)
444 2qg7_A Ethanolamine kinase PV0 95.6 0.023 7.9E-07 64.0 8.5 73 688-766 114-188 (458)
445 3f2s_A CK, chetk-alpha, cholin 95.1 0.029 1E-06 61.6 7.1 139 688-830 58-279 (401)
446 3mes_A Choline kinase; malaria 94.6 0.03 1E-06 62.2 5.7 73 688-766 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 87.4 0.25 8.7E-06 54.6 2.9 29 803-831 246-280 (401)
448 2l2t_A Receptor tyrosine-prote 87.1 0.48 1.7E-05 32.9 3.0 10 612-621 13-22 (44)
449 2k1k_A Ephrin type-A receptor 79.2 1.7 5.9E-05 29.3 3.2 19 608-626 9-27 (38)
450 4ann_A ESSB; membrane protein, 77.3 3.8 0.00013 40.0 6.4 116 737-886 43-158 (215)
451 4ano_A ESSB; membrane protein, 77.1 5.5 0.00019 39.1 7.5 114 737-886 48-163 (219)
452 3cxl_A N-chimerin; SH2, RHO-GA 72.2 0.6 2.1E-05 52.5 -0.9 60 687-749 147-214 (463)
453 2k9y_A Ephrin type-A receptor 64.2 6.5 0.00022 26.9 3.4 12 612-623 16-27 (41)
454 2klu_A T-cell surface glycopro 58.3 10 0.00035 28.5 3.7 25 612-636 13-37 (70)
455 2l34_A TYRO protein tyrosine k 53.8 13 0.00043 24.2 3.1 27 608-634 5-31 (33)
456 2lz0_A Uncharacterized protein 49.3 34 0.0012 28.7 6.2 42 133-175 11-52 (100)
457 3ox7_P MH027; urokinase-type p 48.1 5.5 0.00019 22.1 0.6 10 54-63 5-14 (23)
458 2l2t_A Receptor tyrosine-prote 44.3 30 0.001 24.0 4.0 18 605-622 10-27 (44)
459 2ks1_B Epidermal growth factor 40.5 39 0.0013 23.5 4.1 30 607-637 13-42 (44)
460 2lz0_A Uncharacterized protein 38.8 48 0.0016 27.8 5.5 47 104-152 7-53 (100)
461 1cja_A Protein (actin-fragmin 37.1 1.1E+02 0.0037 31.9 8.8 131 690-831 77-237 (342)
462 2x6h_A GH13170P, VPS34, phosph 34.8 1.9E+02 0.0066 33.6 11.4 45 782-830 529-575 (696)
463 3ls8_A Phosphatidylinositol 3- 34.8 2E+02 0.0068 32.8 11.3 84 742-830 402-501 (614)
464 2l6w_A Beta-type platelet-deri 35.4 11 0.00039 25.0 0.0 25 612-636 11-35 (39)
465 2jwa_A Receptor tyrosine-prote 28.2 32 0.0011 23.9 2.1 10 609-618 15-24 (44)
466 1zza_A Stannin, AG8_1; helix, 23.3 1.1E+02 0.0039 23.3 4.4 11 625-635 30-40 (90)
467 1pi7_A VPU protein, U ORF prot 22.9 57 0.0019 21.6 2.4 24 611-634 7-30 (36)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.1e-76 Score=727.29 Aligned_cols=546 Identities=33% Similarity=0.534 Sum_probs=441.4
Q ss_pred CCCChhHHHHHHHHHhcCCCCccccCCCCCCCCCCCccceEEeCCCCCeeeeeeecCCCCCcc---cc------------
Q 002094 22 DPTFNDDVLGLIVFKAGLEDPKEKLTSWSEDDDNPCNWVGVKCDPKTKRVVGLTLDGFSLSGH---IG------------ 86 (967)
Q Consensus 22 ~~~~~~d~~all~~k~~~~~~~~~l~sw~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~---~~------------ 86 (967)
+...++|++|||+||+++.||. .++||+.+ .+||.|.||+|+ +++|+.|+|.+++++|. ++
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~~~-~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWSSN-KNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT-SCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCCCC-CCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3335789999999999999998 89999855 458999999998 68999999999999887 44
Q ss_pred -----------ccccCCCCCCeEecCCCccCccccc--cccCCCCCcEEEcCCCCCCCCCCchhh---------------
Q 002094 87 -----------RGLLRLQFLQVLSLSNNNFTGTINA--DLASFGTLQVVDFSENNLSGLIPDEFF--------------- 138 (967)
Q Consensus 87 -----------~~l~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~n~~~~~ip~~~~--------------- 138 (967)
..++++++|++|+|++|+++|.+|. .++.+++|++|+|++|.+++.+|..++
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4678889999999999999988888 888888888888888877766665431
Q ss_pred ----------------------------------hcCCCCceEeccccccCCCCccccccccccceeeecccccccccCc
Q 002094 139 ----------------------------------RQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPY 184 (967)
Q Consensus 139 ----------------------------------~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 184 (967)
..+++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 2344455555555555555554 77777777777777777777776
Q ss_pred cccccccCCeEeecCCcCC----------------------CcccccccCC-CCCCeeeccCccccccCCcCccCCCCcc
Q 002094 185 GIWFLRSLQSLDLSNNLLE----------------------GEIVKGISNL-YDLRAIKLGKNKFSGQLPEDIGGCSMLK 241 (967)
Q Consensus 185 ~~~~l~~L~~L~L~~n~l~----------------------~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 241 (967)
.+..+++|++|+|++|.++ +.+|..+..+ ++|++|+|++|++++.+|..|+++++|+
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 321 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCC
T ss_pred HHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCcc
Confidence 6666666666666665554 3555566554 8889999999988888888888888888
Q ss_pred EEeccccccCCCCChh-hhcCCCCCEEEccCCCCCCcCchhhcccc-ccccccccccc----------------------
Q 002094 242 VLDFGVNSLSGSLPDS-LQRLNSCSSLSLKGNSFTGEVPDWIGKLA-NLESLDLSLNQ---------------------- 297 (967)
Q Consensus 242 ~L~l~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~N~---------------------- 297 (967)
+|++++|++++.+|.. +.++++|++|+|++|++++.+|..+..++ +|++|++++|+
T Consensus 322 ~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 401 (768)
T 3rgz_A 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401 (768)
T ss_dssp EEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEEC
T ss_pred EEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEEC
Confidence 8888888888777765 88888888888888888877777776655 55555555554
Q ss_pred ----cccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcc-cccEEeccCCCCCCC
Q 002094 298 ----FSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKM-GLQTVSLSGNRLGES 372 (967)
Q Consensus 298 ----l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~ 372 (967)
+++.+|..+.++++|++|++++|++++.+|..+.++++|+.|++++|++++.+|..+... +|++|++++|++...
T Consensus 402 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 481 (768)
T 3rgz_A 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481 (768)
T ss_dssp CSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred CCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCc
Confidence 444555556666667777777777766667777777777777777777776666665543 677777777777543
Q ss_pred CCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcc
Q 002094 373 MQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPP 452 (967)
Q Consensus 373 ~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 452 (967)
. +..+..+++|++|+|++|++++.+|.+++.+++|++|+|++|++.+.+|..++.+++|+.|++++|+++|.+|.
T Consensus 482 ~-----p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 482 I-----PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp C-----CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred C-----CHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 2 34456788999999999999999999999999999999999999999999999999999999999999877775
Q ss_pred cc----------------------------------------------------------------------cCCCCCCE
Q 002094 453 QI----------------------------------------------------------------------GGAVSLKE 462 (967)
Q Consensus 453 ~~----------------------------------------------------------------------~~l~~L~~ 462 (967)
.+ ..+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 44 33567899
Q ss_pred EEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcc
Q 002094 463 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHL 542 (967)
Q Consensus 463 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 542 (967)
|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|++||||+|+++|.+|..+..+++|+.|||++|++
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccCCCcccCCCCCCCccccCCCCCC
Q 002094 543 HGELPVGGFFNTISPSSVSGNPSLCGSVVNRSCPAV 578 (967)
Q Consensus 543 ~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~c~~~ 578 (967)
+|.||.++.++++...+|.|||++||.++. .|+..
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred cccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999999999985 77643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.6e-58 Score=567.54 Aligned_cols=467 Identities=34% Similarity=0.499 Sum_probs=404.2
Q ss_pred CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceE
Q 002094 68 TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREV 147 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L 147 (967)
-..++.|++.++.+++.++. ++++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|.. .+++|++|
T Consensus 199 l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L 274 (768)
T 3rgz_A 199 CVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYL 274 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEE
T ss_pred CCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEE
Confidence 35677888888888887776 888999999999999999888888999999999999999988877763 78888889
Q ss_pred eccccccCCCCccccccc-cccceeeecccccccccCccccccccCCeEeecCCcCCCccccc-ccCCCCCCeeeccCcc
Q 002094 148 SFANNNLTGPIPESLSFC-SSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKG-ISNLYDLRAIKLGKNK 225 (967)
Q Consensus 148 ~L~~n~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~ 225 (967)
+|++|++++.+|..+..+ ++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|.. +.++++|++|+|++|+
T Consensus 275 ~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~ 354 (768)
T 3rgz_A 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354 (768)
T ss_dssp ECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSE
T ss_pred ECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCc
Confidence 999888888888888765 88999999999998888888889999999999999888777665 8888999999999999
Q ss_pred ccccCCcCccCCC-CccEEeccccccCCCCChhhhc--CCCCCEEEccCCCCCCcCchhhcccccccccccccccccccc
Q 002094 226 FSGQLPEDIGGCS-MLKVLDFGVNSLSGSLPDSLQR--LNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRI 302 (967)
Q Consensus 226 l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~--l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 302 (967)
+++.+|..+..++ +|++|++++|++++.+|..+.. +++|++|++++|.+++.+|..+.++++|++|+|++|++++.+
T Consensus 355 l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 434 (768)
T 3rgz_A 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434 (768)
T ss_dssp EEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCC
T ss_pred cCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcc
Confidence 9888888888887 8888888888888888887776 788889999999888888888888999999999999998888
Q ss_pred CCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcc-cccEEeccCCCCCCCCCCCccccc
Q 002094 303 PSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKM-GLQTVSLSGNRLGESMQYPSFASM 381 (967)
Q Consensus 303 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~~~~~~~~~ 381 (967)
|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|..+... +|++|++++|++.... +..
T Consensus 435 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-----p~~ 509 (768)
T 3rgz_A 435 PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI-----PKW 509 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC-----CGG
T ss_pred cHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC-----ChH
Confidence 8888889999999999999988888889899999999999999988888877664 7899999999886432 344
Q ss_pred ccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCC--------------------------------
Q 002094 382 KDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPAS-------------------------------- 429 (967)
Q Consensus 382 ~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-------------------------------- 429 (967)
+..+++|++|+|++|++++.+|..+..+++|+.|++++|.+.|.+|..
T Consensus 510 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (768)
T 3rgz_A 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 589 (768)
T ss_dssp GGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCS
T ss_pred HhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccc
Confidence 566788899999999998888888888888999998888887766643
Q ss_pred --------------------------------------cCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCC
Q 002094 430 --------------------------------------IGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLS 471 (967)
Q Consensus 430 --------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 471 (967)
+..+++|+.|||++|+++|.+|..++.+++|+.|+|++|+++
T Consensus 590 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~ 669 (768)
T 3rgz_A 590 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 669 (768)
T ss_dssp SEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred cccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccC
Confidence 444678999999999999999999999999999999999999
Q ss_pred CcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCc-ccc
Q 002094 472 GRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNH-LHG 544 (967)
Q Consensus 472 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~-l~~ 544 (967)
|.+|..|+++++|+.|||++|+++|.+|..++++++|++||||+|+++|.+|.. ..+..+....+.+|+ ++|
T Consensus 670 g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 670 GSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEES
T ss_pred CCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcC
Confidence 999999999999999999999999999999999999999999999999999975 334455566677886 555
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.5e-59 Score=561.08 Aligned_cols=483 Identities=20% Similarity=0.266 Sum_probs=342.8
Q ss_pred ChhHHHHHHHHHhcCCCCcc--------ccCCCCCCCCCCCcc---ceEEeCCCCCeeeeeeecCCCCCccccccccCCC
Q 002094 25 FNDDVLGLIVFKAGLEDPKE--------KLTSWSEDDDNPCNW---VGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQ 93 (967)
Q Consensus 25 ~~~d~~all~~k~~~~~~~~--------~l~sw~~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~ 93 (967)
...|+.||.+||+++.+|.. ...+|+.+ .+||.| .||+|+.. +||++|+|.+++++|.+|+++++|+
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 35799999999999875532 34589876 458999 99999864 8999999999999999999999999
Q ss_pred CCCeEecCCCcc------Cc------cccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEecc-----------
Q 002094 94 FLQVLSLSNNNF------TG------TINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFA----------- 150 (967)
Q Consensus 94 ~L~~L~L~~n~l------~~------~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~----------- 150 (967)
+|++|+|++|++ .+ .+|... +..|+ +++++|.+.+.+|..+...+..+..+++.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 999999999987 33 333333 55667 77888877777766553333333333333
Q ss_pred ---------ccccCCCCccccccccccceeeecccccccc-----------------cCcccc--ccccCCeEeecCCcC
Q 002094 151 ---------NNNLTGPIPESLSFCSSLESVNFSSNRLSGQ-----------------LPYGIW--FLRSLQSLDLSNNLL 202 (967)
Q Consensus 151 ---------~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~n~l 202 (967)
+|++++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++|.+
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 456666 666666666666666666666664 666666 666666666666666
Q ss_pred CCcccccccCCCCCCeeeccCcc-ccc-cCCcCccCC------CCccEEeccccccCCCCCh--hhhcCCCCCEEEccCC
Q 002094 203 EGEIVKGISNLYDLRAIKLGKNK-FSG-QLPEDIGGC------SMLKVLDFGVNSLSGSLPD--SLQRLNSCSSLSLKGN 272 (967)
Q Consensus 203 ~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~L~~n 272 (967)
.+.+|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .+.++++|+.|+|++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 66666666666666666666666 665 566666554 66666666666666 5565 6666666666666666
Q ss_pred CCCCcCchhhccccccccccccccccccccCCCCCcccc-cceEEcccCcCCCCCChhhhcCC--CCcEEEccCCcCcCC
Q 002094 273 SFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVF-LKELNISMNQFTGGLPESMMNCG--NLLAIDVSQNKLTGN 349 (967)
Q Consensus 273 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~ 349 (967)
+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|++++.
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 6666666 6666666666666666666 55666666666 666666666666 5555555443 666666666666655
Q ss_pred CChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCC
Q 002094 350 IPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPAS 429 (967)
Q Consensus 350 ~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 429 (967)
+|..+.... ...-.+++|++|+|++|++++..+..+..+++|++|+|++|++. .+|..
T Consensus 418 ~p~~l~~~~---------------------~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~ 475 (636)
T 4eco_A 418 DGKNFDPLD---------------------PTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKN 475 (636)
T ss_dssp TTCSSCTTC---------------------SSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSS
T ss_pred chhhhcccc---------------------cccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHH
Confidence 554332100 00012457888888888888554444556788888888888887 55544
Q ss_pred cCC-c-------ccccEEEecCCcccccCccccc--CCCCCCEEEcCCCCCCCcCCccccccCccceeec------cCCc
Q 002094 430 IGK-L-------KAIQVLDFSDNWLNGTIPPQIG--GAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLIL------SQNN 493 (967)
Q Consensus 430 ~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L------s~N~ 493 (967)
+.. . ++|+.|+|++|+++ .+|..+. .+++|++|+|++|++++ +|..+..+++|+.|+| ++|+
T Consensus 476 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~ 553 (636)
T 4eco_A 476 SLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553 (636)
T ss_dssp SSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCB
T ss_pred HhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCc
Confidence 332 2 38889999999888 6777776 88899999999999986 8888888999999988 5678
Q ss_pred CcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccc
Q 002094 494 LTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHG 544 (967)
Q Consensus 494 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 544 (967)
+.+.+|..+.++++|++|+|++|++ +.+|..+. ++|+.|+|++|++..
T Consensus 554 l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 554 TLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred ccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 8889999999999999999999999 57777765 789999999998874
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.4e-57 Score=555.39 Aligned_cols=473 Identities=21% Similarity=0.286 Sum_probs=375.4
Q ss_pred ChhHHHHHHHHHhcCCCCccccCCCCCCC----CCC--Ccc------------ceEEeCCCCCeeeeeeecCCCCCcccc
Q 002094 25 FNDDVLGLIVFKAGLEDPKEKLTSWSEDD----DNP--CNW------------VGVKCDPKTKRVVGLTLDGFSLSGHIG 86 (967)
Q Consensus 25 ~~~d~~all~~k~~~~~~~~~l~sw~~~~----~~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~~~~~ 86 (967)
..+|++||++||+++.|| +|+.++ .+| |.| .||+|+. .+||++|+|.+++++|.+|
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEEC
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCc
Confidence 468999999999999888 786554 234 999 9999986 6899999999999999999
Q ss_pred ccccCCCCCCeEec-CCCccCccccccc---------------------------------------------------c
Q 002094 87 RGLLRLQFLQVLSL-SNNNFTGTINADL---------------------------------------------------A 114 (967)
Q Consensus 87 ~~l~~l~~L~~L~L-~~n~l~~~~~~~~---------------------------------------------------~ 114 (967)
++|++|++|++|+| ++|.++|..|-.. .
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 8898887733221 1
Q ss_pred CCCCCcEEEcCC--CCCCCCCCchhhhcCCCCceEeccccccCC-----------------CCccccc--cccccceeee
Q 002094 115 SFGTLQVVDFSE--NNLSGLIPDEFFRQCGSLREVSFANNNLTG-----------------PIPESLS--FCSSLESVNF 173 (967)
Q Consensus 115 ~l~~L~~L~Ls~--n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~l~--~l~~L~~L~L 173 (967)
....++.+.+.. |++++ ||.. |+++++|++|+|++|++++ .+|..++ ++++|++|+|
T Consensus 421 ~~l~l~~l~l~~~~N~L~~-IP~~-l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITF-ISKA-IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccchhhceeccccCcccc-hhHH-HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 112333344443 78887 8876 6899999999999999998 3888887 9999999999
Q ss_pred cccccccccCccccccccCCeEeecCCc-CCC-cccccccCCC-------CCCeeeccCccccccCCc--CccCCCCccE
Q 002094 174 SSNRLSGQLPYGIWFLRSLQSLDLSNNL-LEG-EIVKGISNLY-------DLRAIKLGKNKFSGQLPE--DIGGCSMLKV 242 (967)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~n~l~~~~~~--~~~~l~~L~~ 242 (967)
++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .|+++++|++
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 9999999999999999999999999998 988 7888777665 9999999999999 7888 8999999999
Q ss_pred EeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccc-cccccccccccccccCCCCCcccc--cceEEccc
Q 002094 243 LDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLAN-LESLDLSLNQFSGRIPSSIGNLVF--LKELNISM 319 (967)
Q Consensus 243 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~ 319 (967)
|++++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..+.. |+.|+|++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 999999999 778 8999999999999999999 78888999999 999999999998 78888877654 99999999
Q ss_pred CcCCCCCChhh---h--cCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEcc
Q 002094 320 NQFTGGLPESM---M--NCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLS 394 (967)
Q Consensus 320 N~l~~~~~~~~---~--~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~ 394 (967)
|++++.+|... . .+++|+.|++++|+++ .+|..++. .+++|+.|+|+
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~---------------------------~l~~L~~L~Ls 705 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFA---------------------------TGSPISTIILS 705 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHH---------------------------TTCCCSEEECC
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHc---------------------------cCCCCCEEECC
Confidence 99998766432 2 3458999999999998 66766542 12345555555
Q ss_pred CCcccCCCCCCcc-------cccccchhcccccccccccCCCcC--CcccccEEEecCCcccccCcccccCCCCCCEEEc
Q 002094 395 SNALSGVIPSNIG-------DLSSLMLLNMSMNYLFGSIPASIG--KLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKL 465 (967)
Q Consensus 395 ~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 465 (967)
+|+|+...+..+. ++++|+.|+|++|++. .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 706 ~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~L 783 (876)
T 4ecn_A 706 NNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGI 783 (876)
T ss_dssp SCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEEC
T ss_pred CCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEEC
Confidence 5555522222222 2336777777777766 5666665 67777777777777765 5666777777777777
Q ss_pred CC------CCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecC
Q 002094 466 EK------NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISH 539 (967)
Q Consensus 466 ~~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~ 539 (967)
++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|.+
T Consensus 784 s~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~ 860 (876)
T 4ecn_A 784 RHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLY 860 (876)
T ss_dssp CCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEEC
T ss_pred CCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecC
Confidence 55 777778888888888888888888888 56777655 5788888888888777777777776777777777
Q ss_pred Cccc
Q 002094 540 NHLH 543 (967)
Q Consensus 540 N~l~ 543 (967)
|++.
T Consensus 861 n~~~ 864 (876)
T 4ecn_A 861 DKTQ 864 (876)
T ss_dssp CTTS
T ss_pred CCcc
Confidence 7665
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.1e-56 Score=543.46 Aligned_cols=510 Identities=22% Similarity=0.219 Sum_probs=370.2
Q ss_pred CCccceEEeCCC---------CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCC
Q 002094 56 PCNWVGVKCDPK---------TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSE 126 (967)
Q Consensus 56 ~c~w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 126 (967)
.|.++-|.|... ..+++.|+|.++.+++..+..+.++++|++|+|++|++++..|..|+.+++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 466666777532 35799999999999998888899999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcc
Q 002094 127 NNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEI 206 (967)
Q Consensus 127 n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 206 (967)
|+++ .+|...|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|++|+|++|.+++..
T Consensus 83 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 83 NELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 9998 577777899999999999999999888889999999999999999999988999999999999999999999887
Q ss_pred ccccc--CCCCCCeeeccCccccccCCcCccCC---------------------------CCccEEeccccccCCCCChh
Q 002094 207 VKGIS--NLYDLRAIKLGKNKFSGQLPEDIGGC---------------------------SMLKVLDFGVNSLSGSLPDS 257 (967)
Q Consensus 207 ~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l---------------------------~~L~~L~l~~n~l~~~~~~~ 257 (967)
+..+. .+++|++|++++|++++..|..|..+ ++|+.|++++|.+++..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 77654 45788888888888887777665543 34555666666666666666
Q ss_pred hhcCCC--CCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCC----------------------------
Q 002094 258 LQRLNS--CSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIG---------------------------- 307 (967)
Q Consensus 258 l~~l~~--L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------- 307 (967)
|.+++. |+.|+|++|++++..+..|+.+++|++|++++|++.+..|..|.
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 666543 66666666666666666666666666666666666655554444
Q ss_pred -----cccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCC-CChhhh----cccccEEeccCCCCCCCCCCCc
Q 002094 308 -----NLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGN-IPTWIF----KMGLQTVSLSGNRLGESMQYPS 377 (967)
Q Consensus 308 -----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~p~~~~----~~~L~~L~L~~n~l~~~~~~~~ 377 (967)
.+++|++|++++|++++..+..|.++++|+.|++++|.+... ++...+ ..+|+.|++++|++....
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~---- 397 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE---- 397 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC----
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC----
Confidence 445555555556666655555566666666665555543211 111100 013444444444443221
Q ss_pred ccccccCCCCccEEE-------------------------ccCCcccCCCCCCcccccccchhcccccccc--cccCCCc
Q 002094 378 FASMKDSYQGLQVLD-------------------------LSSNALSGVIPSNIGDLSSLMLLNMSMNYLF--GSIPASI 430 (967)
Q Consensus 378 ~~~~~~~~~~L~~L~-------------------------L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~ 430 (967)
+..+..+++|++|+ +++|++.+..+..|..+++|+.|++++|.+. +.+|..|
T Consensus 398 -~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~ 476 (680)
T 1ziw_A 398 -SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF 476 (680)
T ss_dssp -TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTT
T ss_pred -hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCccc
Confidence 11223344444444 4444444444445555555555555555554 4567777
Q ss_pred CCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCC--------ccccccCccceeeccCCcCcCccchhh
Q 002094 431 GKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIP--------SQIKNCSSLTSLILSQNNLTGPVPAAI 502 (967)
Q Consensus 431 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 502 (967)
..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..+ ..|+++++|+.|+|++|+++...+..|
T Consensus 477 ~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 477 QPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHc
Confidence 888888888888888887777778888888888888888875422 237788888888888888886555678
Q ss_pred hcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCC-C-CCCccCCCcccCCCCCCCccc
Q 002094 503 ANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG-G-FFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 503 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~-~~~~~~~~~~~~n~~lc~~~~ 571 (967)
.++++|+.|||++|++++..+..|..+++|+.|+|++|++++..|.. . .+..+....+.+|||.|+|..
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 89999999999999999877778888999999999999998755531 1 245566777899999999874
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-55 Score=530.23 Aligned_cols=506 Identities=21% Similarity=0.224 Sum_probs=431.5
Q ss_pred cceEEeCCC---------CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCC
Q 002094 59 WVGVKCDPK---------TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNL 129 (967)
Q Consensus 59 w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~ 129 (967)
+.-|.|... ...++.|++.++.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 556888642 34789999999999998889999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCccccc
Q 002094 130 SGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKG 209 (967)
Q Consensus 130 ~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 209 (967)
++..|. .|+++++|++|+|++|++++..|..++++++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..
T Consensus 94 ~~~~~~-~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAET-ALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTT-TTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred cccChh-hhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 966565 4699999999999999999877888999999999999999999755455556999999999999999988999
Q ss_pred ccCCCCCC--eeeccCccccccCCcCccCCCCccEEeccccccC--------------------------CCCChhhhcC
Q 002094 210 ISNLYDLR--AIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS--------------------------GSLPDSLQRL 261 (967)
Q Consensus 210 ~~~l~~L~--~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------------------~~~~~~l~~l 261 (967)
|+.+++|+ .|++++|++++..|..|.. .+|++|++++|... ...+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 8999999999887777655 68888888877510 1112233333
Q ss_pred C--CCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEE
Q 002094 262 N--SCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAI 339 (967)
Q Consensus 262 ~--~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 339 (967)
. +|+.|++++|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+.++++|+.|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 2 7889999999999888888999999999999999998 778889999999999999999998888899999999999
Q ss_pred EccCCcCcCCCChh-hhc-ccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcc
Q 002094 340 DVSQNKLTGNIPTW-IFK-MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNM 417 (967)
Q Consensus 340 ~l~~N~l~~~~p~~-~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 417 (967)
++++|.+.+.+|.. +.. .+|++|++++|.+..... ....+..+++|++|++++|++.+..|..|..+++|++|++
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDC---CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEE---STTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccC---cchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 99999998777654 333 489999999999865321 1234566789999999999999888999999999999999
Q ss_pred cccccccccCC-CcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCc---CCccccccCccceeeccCCc
Q 002094 418 SMNYLFGSIPA-SIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGR---IPSQIKNCSSLTSLILSQNN 493 (967)
Q Consensus 418 s~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~ 493 (967)
++|++.+..+. .+..+++|+.|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|+|++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 99999877654 488999999999999999988888999999999999999999863 33678899999999999999
Q ss_pred CcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCC-CCCCccCCCcccCCCCCCCccc
Q 002094 494 LTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG-GFFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 494 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~ 571 (967)
+++..|..|.++++|++|||++|++++..|..+..++.| .|++++|++++.+|.. ..+..+....+.+|||.|.|..
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 998889999999999999999999999999999999999 9999999999766642 2234566677899999998876
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-55 Score=548.84 Aligned_cols=495 Identities=21% Similarity=0.217 Sum_probs=430.8
Q ss_pred CccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccc-cccccCCCCCcEEEcCCCCCCCCCCc
Q 002094 57 CNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTI-NADLASFGTLQVVDFSENNLSGLIPD 135 (967)
Q Consensus 57 c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~~~~~ip~ 135 (967)
|.|..|-+ ...+++.|+|++|.+++..+..|.++++|++|+|++|++.+.+ |..|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56777766 4578999999999999999999999999999999999777666 78999999999999999999976665
Q ss_pred hhhhcCCCCceEeccccccCCCCccc--cccccccceeeecccccccccC-ccccccccCCeEeecCCcCCCcccccccC
Q 002094 136 EFFRQCGSLREVSFANNNLTGPIPES--LSFCSSLESVNFSSNRLSGQLP-YGIWFLRSLQSLDLSNNLLEGEIVKGISN 212 (967)
Q Consensus 136 ~~~~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 212 (967)
. |+++++|++|+|++|++++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..+..+..
T Consensus 92 ~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 92 A-FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp S-SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred H-ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 4 699999999999999999877665 9999999999999999997765 57999999999999999999999999988
Q ss_pred C--CCCCeeeccCccccccCCcCccCCCC------ccEEeccccccCCCCChhhhc------------------------
Q 002094 213 L--YDLRAIKLGKNKFSGQLPEDIGGCSM------LKVLDFGVNSLSGSLPDSLQR------------------------ 260 (967)
Q Consensus 213 l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L~~L~l~~n~l~~~~~~~l~~------------------------ 260 (967)
+ ++|+.|+|++|.+.+..|..++.+++ |++|++++|.+++..+..+..
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8 89999999999999988888887766 999999999888766655432
Q ss_pred --------------CCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCC
Q 002094 261 --------------LNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGL 326 (967)
Q Consensus 261 --------------l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 326 (967)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 268999999999999888999999999999999999999888889999999999999999999888
Q ss_pred ChhhhcCCCCcEEEccCCcCcCCCChhhhc-ccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCC
Q 002094 327 PESMMNCGNLLAIDVSQNKLTGNIPTWIFK-MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSN 405 (967)
Q Consensus 327 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~ 405 (967)
|..|..+++|+.|++++|++.+..+..+.. .+|++|+|++|.+.... .+++|+.|++++|+++. +|..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~----------~~~~L~~L~l~~N~l~~-l~~~ 399 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH----------FIPSIPDIFLSGNKLVT-LPKI 399 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS----------SCCSCSEEEEESCCCCC-CCCC
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc----------CCCCcchhccCCCCccc-cccc
Confidence 999999999999999999998666655543 48999999999987533 26789999999999984 4443
Q ss_pred cccccccchhccccccccccc-CCCcCCcccccEEEecCCcccccCcc-cccCCCCCCEEEcCCCCCC-----CcCCccc
Q 002094 406 IGDLSSLMLLNMSMNYLFGSI-PASIGKLKAIQVLDFSDNWLNGTIPP-QIGGAVSLKELKLEKNFLS-----GRIPSQI 478 (967)
Q Consensus 406 ~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~ 478 (967)
..+++.|++++|++.+.. +..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|
T Consensus 400 ---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~ 476 (844)
T 3j0a_A 400 ---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVF 476 (844)
T ss_dssp ---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCS
T ss_pred ---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhh
Confidence 467899999999997542 22356899999999999999865443 4566889999999999997 4456778
Q ss_pred cccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCC
Q 002094 479 KNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPS 558 (967)
Q Consensus 479 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~ 558 (967)
.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|.. +..+...
T Consensus 477 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l 552 (844)
T 3j0a_A 477 EGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVL 552 (844)
T ss_dssp SCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEE
T ss_pred cCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEE
Confidence 9999999999999999999999999999999999999999988887776 89999999999999988853 5567777
Q ss_pred cccCCCCCCCcccc
Q 002094 559 SVSGNPSLCGSVVN 572 (967)
Q Consensus 559 ~~~~n~~lc~~~~~ 572 (967)
.+.+|||.|+|.+.
T Consensus 553 ~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 553 DITHNKFICECELS 566 (844)
T ss_dssp EEEEECCCCSSSCC
T ss_pred EecCCCcccccccH
Confidence 88999999988763
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-55 Score=530.32 Aligned_cols=482 Identities=20% Similarity=0.217 Sum_probs=415.7
Q ss_pred eeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEecccc
Q 002094 73 GLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANN 152 (967)
Q Consensus 73 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n 152 (967)
.++..+.+++. +|..+.. ++++|+|++|++++..|..|+++++|++|+|++|++++..|. .|+++++|++|+|++|
T Consensus 16 ~~~c~~~~l~~-iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 16 TYNCENLGLNE-IPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHED-TFQSQHRLDTLVLTAN 91 (606)
T ss_dssp EEECTTSCCSS-CCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTT-TTTTCTTCCEEECTTC
T ss_pred eEECCCCCccc-CcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChh-hccCccccCeeeCCCC
Confidence 45666666653 4555543 789999999999999999999999999999999999965555 4799999999999999
Q ss_pred ccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCc
Q 002094 153 NLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPE 232 (967)
Q Consensus 153 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 232 (967)
++++..|..|+++++|++|+|++|++++..|..+..+++|++|+|++|.+++.....+..+++|++|++++|++++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred cccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 99999999999999999999999999988788899999999999999999987666666799999999999999988899
Q ss_pred CccCCCCcc--EEeccccccCCCCChhhhcCCCCCEEEccCCCC--------------------------CCcCchhhcc
Q 002094 233 DIGGCSMLK--VLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSF--------------------------TGEVPDWIGK 284 (967)
Q Consensus 233 ~~~~l~~L~--~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l--------------------------~~~~~~~l~~ 284 (967)
.|+.+++|+ .|++++|.+++..|..+.. .+|+.|++++|.. ....+..+..
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 999999999 8999999999877777654 6888999888751 1122333444
Q ss_pred cc--ccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcc-cccE
Q 002094 285 LA--NLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKM-GLQT 361 (967)
Q Consensus 285 l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~L~~ 361 (967)
+. +|+.|++++|.+++..+..|..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..|..+... +|++
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 43 7999999999999888888999999999999999999 778899999999999999999997777666554 8999
Q ss_pred EeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCC--CCCcccccccchhcccccccccccCCCcCCcccccEE
Q 002094 362 VSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVI--PSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVL 439 (967)
Q Consensus 362 L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 439 (967)
|++++|.+..... ...+..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..|..+..+++|+.|
T Consensus 330 L~l~~n~~~~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 330 LSIKGNTKRLELG----TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp EECCSCSSCCBCC----SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred EECCCCCcccccc----hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 9999998864322 223456899999999999999876 8889999999999999999999999999999999999
Q ss_pred EecCCcccccCccc-ccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCc---cchhhhcccCccEEeccC
Q 002094 440 DFSDNWLNGTIPPQ-IGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGP---VPAAIANLSNLKYVDLSF 515 (967)
Q Consensus 440 ~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~ 515 (967)
++++|++++..|.. +..+++|++|++++|.+++..|..++.+++|+.|+|++|++++. .+..+..+++|++|+|++
T Consensus 406 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 485 (606)
T 3t6q_A 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSF 485 (606)
T ss_dssp ECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTT
T ss_pred ECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCC
Confidence 99999999776654 89999999999999999999999999999999999999999873 336799999999999999
Q ss_pred CccccCCchhhhhccCCceEEecCCcccccCCCC-CCCCccCCCcccCCCC
Q 002094 516 NDLSGILPKELINLSHLLSFNISHNHLHGELPVG-GFFNTISPSSVSGNPS 565 (967)
Q Consensus 516 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 565 (967)
|++++..|..|..+++|+.|+|++|++++.+|.. .....+ ...+.+|.-
T Consensus 486 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 486 CDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred CccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 9999999999999999999999999999877742 112233 344556643
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.7e-55 Score=527.67 Aligned_cols=505 Identities=20% Similarity=0.184 Sum_probs=430.6
Q ss_pred CCCcc----ceEEeCCC---------CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcE
Q 002094 55 NPCNW----VGVKCDPK---------TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQV 121 (967)
Q Consensus 55 ~~c~w----~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (967)
+||.| ..|.|... ..+++.|+|.++.+++..+..|.++++|++|+|++|++++..|..|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 45665 35778532 357999999999999988889999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeeccccccc-ccCccccccccCCeEeecCC
Q 002094 122 VDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSG-QLPYGIWFLRSLQSLDLSNN 200 (967)
Q Consensus 122 L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n 200 (967)
|+|++|.+++..|.. |+++++|++|+|++|++++..+..++++++|++|+|++|++++ .+|..|+++++|++|+|++|
T Consensus 85 L~Ls~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 85 LILTGNPIQSFSPGS-FSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EECTTCCCCCCCTTS-STTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred eECCCCcccccChhh-cCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 999999999765654 6999999999999999998888899999999999999999986 56999999999999999999
Q ss_pred cCCCcccccccCCCCCC----eeeccCccccccCCcCccCCCCccEEeccccccC-CCCChhhhcCCCCCEEEc------
Q 002094 201 LLEGEIVKGISNLYDLR----AIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS-GSLPDSLQRLNSCSSLSL------ 269 (967)
Q Consensus 201 ~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~L------ 269 (967)
.+++..+..|+.+.+|+ +|++++|++++..+..+... +|++|++++|.++ +..|..+.++++|+.+++
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~ 242 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFK 242 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCT
T ss_pred cceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccc
Confidence 99999899888887776 79999999997776666665 8999999999987 356677788888777666
Q ss_pred ---------------------------cCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcC
Q 002094 270 ---------------------------KGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQF 322 (967)
Q Consensus 270 ---------------------------~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 322 (967)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|++
T Consensus 243 ~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l 319 (606)
T 3vq2_A 243 DERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL 319 (606)
T ss_dssp TSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC
T ss_pred cCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC
Confidence 66777777776 888999999999999997 455 788899999999999999
Q ss_pred CCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCC
Q 002094 323 TGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVI 402 (967)
Q Consensus 323 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 402 (967)
+.+| .+ .+++|+.|++++|+..+.++ .....+|++|++++|.+..... ....+..+++|++|++++|.+++ +
T Consensus 320 -~~lp-~~-~l~~L~~L~l~~n~~~~~~~-~~~l~~L~~L~ls~n~l~~~~~---~~~~~~~~~~L~~L~L~~n~l~~-~ 391 (606)
T 3vq2_A 320 -KQFP-TL-DLPFLKSLTLTMNKGSISFK-KVALPSLSYLDLSRNALSFSGC---CSYSDLGTNSLRHLDLSFNGAII-M 391 (606)
T ss_dssp -SSCC-CC-CCSSCCEEEEESCSSCEECC-CCCCTTCCEEECCSSCEEEEEE---CCHHHHCCSCCCEEECCSCSEEE-E
T ss_pred -cccc-cC-CCCccceeeccCCcCccchh-hccCCCCCEEECcCCccCCCcc---hhhhhccCCcccEeECCCCcccc-c
Confidence 5677 45 89999999999996654442 2233489999999998864321 12334567899999999999985 5
Q ss_pred CCCcccccccchhcccccccccccC-CCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCC-cCCccccc
Q 002094 403 PSNIGDLSSLMLLNMSMNYLFGSIP-ASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSG-RIPSQIKN 480 (967)
Q Consensus 403 ~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~ 480 (967)
|..+..+++|+.|++++|++.+..| ..+..+++|++|++++|++++..|..+..+++|++|+|++|.+++ .+|..|+.
T Consensus 392 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 471 (606)
T 3vq2_A 392 SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN 471 (606)
T ss_dssp CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc
Confidence 5889999999999999999988877 688999999999999999998899999999999999999999987 47889999
Q ss_pred cCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCC-CCCC-ccCCC
Q 002094 481 CSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG-GFFN-TISPS 558 (967)
Q Consensus 481 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~-~~~~~ 558 (967)
+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|+|++|+++ .+|.. ..+. .+...
T Consensus 472 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l 550 (606)
T 3vq2_A 472 TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFF 550 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEE
T ss_pred CCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEE
Confidence 999999999999999988999999999999999999999999999999999999999999998 56654 1122 35566
Q ss_pred cccCCCCCCCccccC
Q 002094 559 SVSGNPSLCGSVVNR 573 (967)
Q Consensus 559 ~~~~n~~lc~~~~~~ 573 (967)
.+.+|||.|+|++..
T Consensus 551 ~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 551 NLTNNSVACICEHQK 565 (606)
T ss_dssp ECCSCCCCCSSTTHH
T ss_pred EccCCCcccCCccHH
Confidence 789999999888643
No 10
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.4e-52 Score=512.13 Aligned_cols=481 Identities=20% Similarity=0.183 Sum_probs=351.6
Q ss_pred CeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEe
Q 002094 69 KRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVS 148 (967)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~ 148 (967)
.+++.|++.++.+++..+..++++++|++|+|++|++++..+..|+.+++|++|+|++|++++ +|...|+++++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCc-cChhHccccCCCCEEE
Confidence 356677777777777666677777777777777777776555567777777777777777763 4434456777777777
Q ss_pred ccccccCCCCccccccccccceeeecccccccccCcccc--ccccCCeEeecCCcCCCcccc------------------
Q 002094 149 FANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIW--FLRSLQSLDLSNNLLEGEIVK------------------ 208 (967)
Q Consensus 149 L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~n~l~~~~~~------------------ 208 (967)
|++|++++..|..++++++|++|+|++|++++..+..+. .+++|++|+|++|.+++..+.
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 777777766666677777777777777776655554433 235566666666665555444
Q ss_pred ---------------------------------cccCCCC--CCeeeccCccccccCCcCccCCCCccEEeccccccCCC
Q 002094 209 ---------------------------------GISNLYD--LRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGS 253 (967)
Q Consensus 209 ---------------------------------~~~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 253 (967)
.|.+++. |+.|+|++|++++..+..|+.+++|++|++++|++++.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 4444432 66666666666666566666666666666666666655
Q ss_pred CChhhhcCCCCCEEEccCCCCCC-----cCc----hhhccccccccccccccccccccCCCCCcccccceEEc-------
Q 002094 254 LPDSLQRLNSCSSLSLKGNSFTG-----EVP----DWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNI------- 317 (967)
Q Consensus 254 ~~~~l~~l~~L~~L~L~~n~l~~-----~~~----~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------- 317 (967)
.|..|.++++|+.|++++|...+ .+| ..|..+++|++|++++|++.+..+..|..+++|++|++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 55555555555444444433221 111 14555666777777777777666666666655555555
Q ss_pred ---------------------ccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCCh-hhhc-ccccEEeccCCCCCCCCC
Q 002094 318 ---------------------SMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPT-WIFK-MGLQTVSLSGNRLGESMQ 374 (967)
Q Consensus 318 ---------------------~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~~L~~L~L~~n~l~~~~~ 374 (967)
++|++++..|..|..+++|+.|++++|++.+.+|. .+.. .+|++|++++|++....
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~- 446 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT- 446 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECC-
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeC-
Confidence 55566666777888888999999999988876663 3332 37889999999875433
Q ss_pred CCcccccccCCCCccEEEccCCccc--CCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCc-
Q 002094 375 YPSFASMKDSYQGLQVLDLSSNALS--GVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIP- 451 (967)
Q Consensus 375 ~~~~~~~~~~~~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p- 451 (967)
...+..+++|+.|++++|.++ +.+|..|..+++|+.|+|++|++.+..+..|.++++|++|+|++|++++..+
T Consensus 447 ----~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 522 (680)
T 1ziw_A 447 ----RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKH 522 (680)
T ss_dssp ----TTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGST
T ss_pred ----hhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchh
Confidence 233456789999999999997 5789999999999999999999998888899999999999999999986422
Q ss_pred -------ccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCch
Q 002094 452 -------PQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPK 524 (967)
Q Consensus 452 -------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 524 (967)
..+.++++|++|+|++|+++...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|.
T Consensus 523 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~ 602 (680)
T 1ziw_A 523 ANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 602 (680)
T ss_dssp TSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHH
T ss_pred hccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChh
Confidence 2378899999999999999966666899999999999999999988888899999999999999999999998
Q ss_pred hhh-hccCCceEEecCCcccccCCC-CCCCCcc
Q 002094 525 ELI-NLSHLLSFNISHNHLHGELPV-GGFFNTI 555 (967)
Q Consensus 525 ~l~-~l~~L~~L~l~~N~l~~~~p~-~~~~~~~ 555 (967)
.+. .+++|+.|++++|+|.+.++. .++..++
T Consensus 603 ~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~ 635 (680)
T 1ziw_A 603 VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWI 635 (680)
T ss_dssp HHHHHHTTCSEEECTTCCCCBCCCCCSSEECCS
T ss_pred HhcccccccCEEEccCCCcccCCccHHHHHHHH
Confidence 888 899999999999999999885 5554444
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-53 Score=523.52 Aligned_cols=488 Identities=20% Similarity=0.209 Sum_probs=427.2
Q ss_pred CCeeeeeeecCCCCCccc-cccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCc-hhhhcCCCCc
Q 002094 68 TKRVVGLTLDGFSLSGHI-GRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPD-EFFRQCGSLR 145 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~-~~~~~l~~L~ 145 (967)
-.+++.|+|+++...+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++.+|. ..|+++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 357889999999888888 66899999999999999999999999999999999999999999987665 3579999999
Q ss_pred eEeccccccCCCCc-cccccccccceeeecccccccccCcccccc--ccCCeEeecCCcCCCcccccccCCCC------C
Q 002094 146 EVSFANNNLTGPIP-ESLSFCSSLESVNFSSNRLSGQLPYGIWFL--RSLQSLDLSNNLLEGEIVKGISNLYD------L 216 (967)
Q Consensus 146 ~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L 216 (967)
+|+|++|.+++..+ ..|+++++|++|+|++|++++..+..+..+ ++|+.|+|++|.+.+..+..+..+.+ |
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 99999999998765 579999999999999999999999999888 89999999999999988888877766 9
Q ss_pred CeeeccCccccccCCcCccC--------------------------------------CCCccEEeccccccCCCCChhh
Q 002094 217 RAIKLGKNKFSGQLPEDIGG--------------------------------------CSMLKVLDFGVNSLSGSLPDSL 258 (967)
Q Consensus 217 ~~L~L~~n~l~~~~~~~~~~--------------------------------------l~~L~~L~l~~n~l~~~~~~~l 258 (967)
+.|++++|++++..+..+.. .++|++|++++|.+.+..+..|
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 99999999887666554432 2689999999999998889999
Q ss_pred hcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcE
Q 002094 259 QRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLA 338 (967)
Q Consensus 259 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 338 (967)
..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 99999999999999999999999999999999999999999888999999999999999999999988899999999999
Q ss_pred EEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCC-CCcccccccchhcc
Q 002094 339 IDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIP-SNIGDLSSLMLLNM 417 (967)
Q Consensus 339 L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L 417 (967)
|++++|.+++ ++. ..+|+.|++++|++..... ...+++.|++++|++++... ..+..+++|+.|+|
T Consensus 367 L~Ls~N~l~~-i~~---~~~L~~L~l~~N~l~~l~~---------~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~L 433 (844)
T 3j0a_A 367 LDLRDNALTT-IHF---IPSIPDIFLSGNKLVTLPK---------INLTANLIHLSENRLENLDILYFLLRVPHLQILIL 433 (844)
T ss_dssp EEEETCCSCC-CSS---CCSCSEEEEESCCCCCCCC---------CCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEE
T ss_pred EECCCCCCCc-ccC---CCCcchhccCCCCcccccc---------cccccceeecccCccccCchhhhhhcCCccceeeC
Confidence 9999999984 333 4579999999999975432 24679999999999997532 23568899999999
Q ss_pred cccccccccCC-CcCCcccccEEEecCCccc-----ccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccC
Q 002094 418 SMNYLFGSIPA-SIGKLKAIQVLDFSDNWLN-----GTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQ 491 (967)
Q Consensus 418 s~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 491 (967)
++|++.+..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 434 s~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 513 (844)
T 3j0a_A 434 NQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNS 513 (844)
T ss_dssp ESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEES
T ss_pred CCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCC
Confidence 99999865443 4667899999999999997 44556788999999999999999999999999999999999999
Q ss_pred CcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCCCCCCccc
Q 002094 492 NNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 492 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 571 (967)
|+|++..|..+. ++|+.|||++|+|++..|..| .+|+.|++++|++.|.++...+..++ ..+|...|+.+.
T Consensus 514 N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~~f~~~~----~~~~~~~~~~~~ 584 (844)
T 3j0a_A 514 NRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINWL----NHTNVTIAGPPA 584 (844)
T ss_dssp CCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCCSHHHHH----HHTTTTTCCCGG
T ss_pred CCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccHHHHHHH----HhcCcccccccc
Confidence 999988777776 899999999999999999876 47899999999999998866554433 245666777776
Q ss_pred cCCCCC
Q 002094 572 NRSCPA 577 (967)
Q Consensus 572 ~~~c~~ 577 (967)
...|..
T Consensus 585 ~~~C~~ 590 (844)
T 3j0a_A 585 DIYCVY 590 (844)
T ss_dssp GCCCSS
T ss_pred cCccCC
Confidence 667754
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-51 Score=496.88 Aligned_cols=471 Identities=22% Similarity=0.201 Sum_probs=418.2
Q ss_pred CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceE
Q 002094 68 TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREV 147 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L 147 (967)
-.+++.|++.++.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..+. .|+++++|++|
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L 133 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESF-PIGQLITLKKL 133 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSS-CCTTCTTCCEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccccc-ccCCCCCCCEE
Confidence 35789999999999998888999999999999999999999999999999999999999999854444 47999999999
Q ss_pred eccccccCC-CCccccccccccceeeecccccccccCccccccccCC----eEeecCCcCCCcccccccCCCCCCeeecc
Q 002094 148 SFANNNLTG-PIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQ----SLDLSNNLLEGEIVKGISNLYDLRAIKLG 222 (967)
Q Consensus 148 ~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 222 (967)
+|++|++++ .+|..|+++++|++|+|++|++++..|..+..+++|+ +|++++|.+++..+..+... +|+.|+++
T Consensus 134 ~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~ 212 (606)
T 3vq2_A 134 NVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLR 212 (606)
T ss_dssp ECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEE
T ss_pred eCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeecc
Confidence 999999987 5699999999999999999999999899999888876 79999999998777777666 99999999
Q ss_pred Ccccc-ccCCcCccCCCCccEEec---------------------------------cccccCCCCChhhhcCCCCCEEE
Q 002094 223 KNKFS-GQLPEDIGGCSMLKVLDF---------------------------------GVNSLSGSLPDSLQRLNSCSSLS 268 (967)
Q Consensus 223 ~n~l~-~~~~~~~~~l~~L~~L~l---------------------------------~~n~l~~~~~~~l~~l~~L~~L~ 268 (967)
+|.++ +..|..+++++.|+.+++ ..|.+.+.+|. +..+++|+.|+
T Consensus 213 ~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~ 291 (606)
T 3vq2_A 213 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMS 291 (606)
T ss_dssp SCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEE
T ss_pred CCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEE
Confidence 99986 455666777777777666 56677777776 89999999999
Q ss_pred ccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcC
Q 002094 269 LKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTG 348 (967)
Q Consensus 269 L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 348 (967)
+++|.++. +| .+..+++|++|++++|++ +.+| .+ .+++|+.|++++|+..+.. .+..+++|+.|++++|++++
T Consensus 292 l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 364 (606)
T 3vq2_A 292 LAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSF 364 (606)
T ss_dssp EESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEE
T ss_pred ecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCC
Confidence 99999974 55 789999999999999999 5778 45 9999999999999665443 67799999999999999986
Q ss_pred C--CChhhhc-ccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCC-CCcccccccchhccccccccc
Q 002094 349 N--IPTWIFK-MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIP-SNIGDLSSLMLLNMSMNYLFG 424 (967)
Q Consensus 349 ~--~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~ 424 (967)
. +|..+.. .+|++|++++|.+.... ..+..+++|++|++++|++.+..| ..+..+++|++|++++|.+.+
T Consensus 365 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 438 (606)
T 3vq2_A 365 SGCCSYSDLGTNSLRHLDLSFNGAIIMS------ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438 (606)
T ss_dssp EEECCHHHHCCSCCCEEECCSCSEEEEC------CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEE
T ss_pred CcchhhhhccCCcccEeECCCCccccch------hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCc
Confidence 5 3665555 48999999999986532 345668999999999999999888 789999999999999999999
Q ss_pred ccCCCcCCcccccEEEecCCcccc-cCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhh
Q 002094 425 SIPASIGKLKAIQVLDFSDNWLNG-TIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIA 503 (967)
Q Consensus 425 ~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 503 (967)
..|..+..+++|++|++++|++++ .+|..+..+++|++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|.
T Consensus 439 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 518 (606)
T 3vq2_A 439 DFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518 (606)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHcc
Confidence 999999999999999999999997 4788999999999999999999999999999999999999999999999999999
Q ss_pred cccCccEEeccCCccccCCchhhhhcc-CCceEEecCCcccccCCCCCCCCcc
Q 002094 504 NLSNLKYVDLSFNDLSGILPKELINLS-HLLSFNISHNHLHGELPVGGFFNTI 555 (967)
Q Consensus 504 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~~~~~~~~ 555 (967)
++++|++|||++|+++ .+|..+..++ +|+.|++++|+|.+.++..++.+++
T Consensus 519 ~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l 570 (606)
T 3vq2_A 519 QLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWV 570 (606)
T ss_dssp TCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTT
T ss_pred CCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHH
Confidence 9999999999999999 6777799997 5999999999999988876555554
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-51 Score=489.43 Aligned_cols=473 Identities=21% Similarity=0.199 Sum_probs=395.6
Q ss_pred CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceE
Q 002094 68 TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREV 147 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L 147 (967)
..+++.|++.++.+++..+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++ +|...|+++++|++|
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKL 105 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTTTCTTCCEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc-cCHhhhcCccccccc
Confidence 3578899999999999888899999999999999999999888999999999999999999985 555567999999999
Q ss_pred eccccccCCCCccccccccccceeeeccccccc-ccCccccccccCCeEeecCCcCCCcccccccCCCCC----Ceeecc
Q 002094 148 SFANNNLTGPIPESLSFCSSLESVNFSSNRLSG-QLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDL----RAIKLG 222 (967)
Q Consensus 148 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~ 222 (967)
+|++|++++..+..++++++|++|+|++|++++ .+|..|+++++|++|++++|.+++..+..++.+++| +.|+++
T Consensus 106 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp ECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECT
T ss_pred cccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccC
Confidence 999999998777679999999999999999987 468999999999999999999999888999999888 899999
Q ss_pred CccccccCCcCccCCCCccEEeccccccCC-CCChhhhcCCC--------------------------------CCEEEc
Q 002094 223 KNKFSGQLPEDIGGCSMLKVLDFGVNSLSG-SLPDSLQRLNS--------------------------------CSSLSL 269 (967)
Q Consensus 223 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~--------------------------------L~~L~L 269 (967)
+|.+++..+..|..+ +|++|++++|.... .++..+..+++ ++.+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 999998888888776 89999999885332 12223333333 344555
Q ss_pred cCC-CCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcC
Q 002094 270 KGN-SFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTG 348 (967)
Q Consensus 270 ~~n-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 348 (967)
++| .+.+..+..+..+++|++|++++|.+. .+|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 555 566677888888899999999999888 577778888 8999999999888 4454 477889999999998886
Q ss_pred CCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccC-
Q 002094 349 NIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIP- 427 (967)
Q Consensus 349 ~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p- 427 (967)
..+. ....+|++|++++|.+.... .....+..+++|++|++++|.+.+..+. +..+++|++|++++|.+.+..+
T Consensus 340 ~~~~-~~~~~L~~L~l~~n~l~~~~---~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~ 414 (570)
T 2z63_A 340 AFSE-VDLPSLEFLDLSRNGLSFKG---CCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEF 414 (570)
T ss_dssp BCCC-CBCTTCCEEECCSSCCBEEE---EEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTS
T ss_pred cccc-ccCCCCCEEeCcCCccCccc---cccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccch
Confidence 6655 33347899999999886432 1123345678899999999999866555 8889999999999999887666
Q ss_pred CCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCC-CcCCccccccCccceeeccCCcCcCccchhhhccc
Q 002094 428 ASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLS-GRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLS 506 (967)
Q Consensus 428 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 506 (967)
..+..+++|++|++++|++.+..|..+.++++|++|+|++|.++ +.+|..+..+++|+.|+|++|++++..|..|.+++
T Consensus 415 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 494 (570)
T 2z63_A 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494 (570)
T ss_dssp CTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhccc
Confidence 57888999999999999998888888999999999999999987 57888899999999999999999988888999999
Q ss_pred CccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCC
Q 002094 507 NLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFF 552 (967)
Q Consensus 507 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 552 (967)
+|++|+|++|++++..|..|..+++|+.|++++|+++|.+|...++
T Consensus 495 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 540 (570)
T 2z63_A 495 SLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 540 (570)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHH
Confidence 9999999999999888888899999999999999999988876554
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.8e-51 Score=444.13 Aligned_cols=257 Identities=26% Similarity=0.368 Sum_probs=216.6
Q ss_pred CCCCccCCCCceEEEEEEeC------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 685 NKDCELGRGGFGVVYRTILQ------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+..++||+|+||+||+|++. +++.||||+++........++|.+|+.++++++|||||+++|+|.+++..++||
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~ 108 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIF 108 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEE
Confidence 44678999999999999863 468899999976655556788999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEee
Q 002094 759 EFISSGSLYKHLHDGSS-------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGD 825 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~D 825 (967)
|||++|+|.++++.... ...++|.++.+|+.|||.||+|||+++||||||||+|||+++++.+||+|
T Consensus 109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~D 188 (308)
T 4gt4_A 109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD 188 (308)
T ss_dssp ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECC
Confidence 99999999999975432 12489999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhc
Q 002094 826 FGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 826 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
||+|+.....+.....+...||+.|+|||++ ..+.++.++|||||||++|||+| |+.||....... ..+.+
T Consensus 189 FGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~~~~i----- 260 (308)
T 4gt4_A 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--VVEMI----- 260 (308)
T ss_dssp SCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--HHHHH-----
T ss_pred cccceeccCCCceeEecccccCCcccCHHHH-hCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH-----
Confidence 9999876544444445567899999999998 66789999999999999999998 899997654321 11111
Q ss_pred cCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhc
Q 002094 905 DGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQ 957 (967)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~ 957 (967)
....+.+.|.+++.++.+++.+||+.||++||||+||++.|+.+.
T Consensus 261 --------~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 --------RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp --------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --------HcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 112233457788889999999999999999999999999998753
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.6e-51 Score=442.45 Aligned_cols=260 Identities=25% Similarity=0.390 Sum_probs=217.2
Q ss_pred ccCCCCccCCCCceEEEEEEeC------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLL 756 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 756 (967)
.|...+.||+|+||+||+|++. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+++..++
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 3566788999999999999864 47889999997654 3456789999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeec
Q 002094 757 IYEFISSGSLYKHLHDGS----------SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDF 826 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~----------~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Df 826 (967)
|||||++|+|.++++... ....++|.++.+++.|||.||+|||+++|+||||||+|||+++++.+||+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCc
Confidence 999999999999997642 2235999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhcc
Q 002094 827 GLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALED 905 (967)
Q Consensus 827 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (967)
|+|+...............||+.|+|||++ ....++.++|||||||++|||+| |+.||....... ....+
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~-~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~-~~~~i------- 243 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESI-MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECI------- 243 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHH-------
T ss_pred ccceecCCCCceeecCceecChhhcCHHHH-cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHH-------
Confidence 999876554444444556799999999998 66789999999999999999999 999997654321 11111
Q ss_pred CCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 906 GRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
....+.+.|..++.++.+++.+||+.||++||||+|+.+.|+++.+.
T Consensus 244 -------~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 244 -------TQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp -------HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------HcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11123345677888999999999999999999999999999988653
No 16
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8e-51 Score=436.57 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=209.0
Q ss_pred cCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecC
Q 002094 684 LNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFIS 762 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 762 (967)
++..+.||+|+||+||+|+++ ..||||+++.... .+..++|.+|++++++++|||||+++|++.+ +..++|||||+
T Consensus 38 l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~ 114 (307)
T 3omv_A 38 VMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCE 114 (307)
T ss_dssp CCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCS
T ss_pred eEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCC
Confidence 466778999999999999875 3699999875442 3445789999999999999999999998864 56899999999
Q ss_pred CCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccccc
Q 002094 763 SGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSS 842 (967)
Q Consensus 763 ~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 842 (967)
+|+|.++++.... .++|.++.+|+.|||.||+|||+++||||||||+|||+++++.+||+|||+|+............
T Consensus 115 gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~ 192 (307)
T 3omv_A 115 GSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp SCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred CCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence 9999999986543 38999999999999999999999999999999999999999999999999998765433333445
Q ss_pred cccccccccCcccccC--cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 843 KIQSALGYMAPEFACR--TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 843 ~~~gt~~y~aPE~~~~--~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
...||+.|+|||++.. .+.++.++|||||||++|||+||+.||......... ...+......+. ....
T Consensus 193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~-~~~~~~~~~~p~---------~~~~ 262 (307)
T 3omv_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGRGYASPD---------LSKL 262 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHTTCCCCC---------STTS
T ss_pred ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH-HHHHhcCCCCCC---------cccc
Confidence 6789999999998842 346899999999999999999999999765443222 222221111110 1234
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
+.+++.++.+++.+||+.||++||||+||++.|+.++..+
T Consensus 263 ~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 5667888999999999999999999999999999988765
No 17
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.6e-51 Score=444.50 Aligned_cols=259 Identities=25% Similarity=0.400 Sum_probs=209.8
Q ss_pred cCCCCccCCCCceEEEEEEeC------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 684 LNKDCELGRGGFGVVYRTILQ------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+...++||+|+||+||+|+++ +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++..++|
T Consensus 43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 455678999999999999864 47899999997554 44567899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEee
Q 002094 758 YEFISSGSLYKHLHDGSS------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGD 825 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~D 825 (967)
||||++|+|.++++.... ..+++|.++.+|+.|||.||+|||+++|+||||||+|||+++++.+||+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcc
Confidence 999999999999976432 23589999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhc
Q 002094 826 FGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 826 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
||+|+...........+...||+.|+|||++ ....++.++|||||||++|||+| |+.||....... .. ..+
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~-~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-~~-~~i----- 273 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AI-DCI----- 273 (329)
T ss_dssp CC----------------CCCCGGGCCHHHH-TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-HH-HHH-----
T ss_pred cccceeccCCCcceecCcccccccccChhhh-cCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-HH-HHH-----
Confidence 9999876544444444567799999999998 66789999999999999999999 999997654321 11 111
Q ss_pred cCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 905 DGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
....+.+.|..++.++.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 274 --------~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 274 --------TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp --------HHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --------HcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11223445677888999999999999999999999999999998764
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.9e-50 Score=474.54 Aligned_cols=478 Identities=19% Similarity=0.216 Sum_probs=334.3
Q ss_pred CCccceEEeCCC-----------CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEc
Q 002094 56 PCNWVGVKCDPK-----------TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDF 124 (967)
Q Consensus 56 ~c~w~gv~c~~~-----------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (967)
.|.|.|| |+.. ..+++.|++.++.+++..+..+.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999999 8643 235777777777777776777777777777777777777777777777777777777
Q ss_pred CCCCCCCCCCchhhhcCCCCceEeccccccCC-CCccccccccccceeeecccccccccC-ccccccccCCeEeecCCcC
Q 002094 125 SENNLSGLIPDEFFRQCGSLREVSFANNNLTG-PIPESLSFCSSLESVNFSSNRLSGQLP-YGIWFLRSLQSLDLSNNLL 202 (967)
Q Consensus 125 s~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~l 202 (967)
++|++++ ++...|+++++|++|+|++|++++ ..|..++++++|++|+|++|++.+.+| ..|..+++|++|+|++|.+
T Consensus 82 s~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSS-LSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCS-CCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccCc-cCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 7777774 444445777777777777777775 345667777777777777777433443 5677777777777777777
Q ss_pred CCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCC--C-hhhhcCCCCCEEEccCCCCCCcCc
Q 002094 203 EGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSL--P-DSLQRLNSCSSLSLKGNSFTGEVP 279 (967)
Q Consensus 203 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~-~~l~~l~~L~~L~L~~n~l~~~~~ 279 (967)
++..|..+..+++|++|+++.|.+.......++.+++|++|++++|++++.. | .....+++|+.|++++|.+++..+
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred cccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 7777777777777777777777765332223455777777777777777532 1 123446677777777777765443
Q ss_pred hh----hcccccccccccccccccccc------CCCCCcccccceEEcccCcCCCC-----CChhhhcCCCCcEEEccCC
Q 002094 280 DW----IGKLANLESLDLSLNQFSGRI------PSSIGNLVFLKELNISMNQFTGG-----LPESMMNCGNLLAIDVSQN 344 (967)
Q Consensus 280 ~~----l~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~l~~N 344 (967)
.. +..+++|+.|++++|.+.+.. ...+..+.+|+.|.+.++.+... .+..+...++|+.|++++|
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESS
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccC
Confidence 33 345667777777777776531 12345667777777777766531 2333455677888888888
Q ss_pred cCcCCCChhhh--cccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCC--CCcccccccchhccccc
Q 002094 345 KLTGNIPTWIF--KMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIP--SNIGDLSSLMLLNMSMN 420 (967)
Q Consensus 345 ~l~~~~p~~~~--~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~Ls~N 420 (967)
++. .+|..++ ..+|++|++++|++..... ........+++|++|+|++|++++..+ ..+..+++|++|++++|
T Consensus 321 ~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N 397 (549)
T 2z81_A 321 KVF-LVPCSFSQHLKSLEFLDLSENLMVEEYL--KNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN 397 (549)
T ss_dssp CCC-CCCHHHHHHCTTCCEEECCSSCCCHHHH--HHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTC
T ss_pred ccc-cCCHHHHhcCccccEEEccCCccccccc--cchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCC
Confidence 876 6776654 3478888888888754210 001123456788888888888876543 45777888888888888
Q ss_pred ccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccch
Q 002094 421 YLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPA 500 (967)
Q Consensus 421 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 500 (967)
++. .+|..+..+++|++|++++|+++ .+|..+ .++|++|+|++|+|++.+ ..+++|+.|+|++|+|+ .+|.
T Consensus 398 ~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~ 468 (549)
T 2z81_A 398 TFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD 468 (549)
T ss_dssp CCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC
T ss_pred CCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC
Confidence 887 67777888888888888888886 344433 257888888888887542 56788888888888887 4565
Q ss_pred hhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCC
Q 002094 501 AIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPV 548 (967)
Q Consensus 501 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 548 (967)
...+++|++|||++|++++.+|..+..+++|+.|++++|++.|.+|.
T Consensus 469 -~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 469 -ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp -GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred -cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 46788888888888888888888888888888888888888877774
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.2e-50 Score=482.95 Aligned_cols=437 Identities=20% Similarity=0.260 Sum_probs=372.4
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCC------CC------CCCchhhhcCCCCceEeccccccCCCCcc
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNL------SG------LIPDEFFRQCGSLREVSFANNNLTGPIPE 160 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~------~~------~ip~~~~~~l~~L~~L~L~~n~l~~~~p~ 160 (967)
.+++.|+|++|+++|.+|++|+.+++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~---~~~l~-l~l~~~~l~~~~~~ 156 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ---KQKMR-MHYQKTFVDYDPRE 156 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH---HHHHH-THHHHHHTCCCGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH---HHHHH-hhHHHhhhccCchh
Confidence 4789999999999999999999999999999999976 33 566654 56677 99999999998888
Q ss_pred cccc-ccccceeeec--------------------ccccccccCccccccccCCeEeecCCcCCCc--------------
Q 002094 161 SLSF-CSSLESVNFS--------------------SNRLSGQLPYGIWFLRSLQSLDLSNNLLEGE-------------- 205 (967)
Q Consensus 161 ~l~~-l~~L~~L~L~--------------------~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-------------- 205 (967)
.+.. +..+..+++. +|+++| +|..++++++|++|+|++|.+++.
T Consensus 157 ~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 157 DFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp GSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred hHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchh
Confidence 7763 2333333333 688988 898999999999999999999985
Q ss_pred ---cccccc--CCCCCCeeeccCccccccCCcCccCCCCccEEeccccc-cCC-CCChhhhcC------CCCCEEEccCC
Q 002094 206 ---IVKGIS--NLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNS-LSG-SLPDSLQRL------NSCSSLSLKGN 272 (967)
Q Consensus 206 ---~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~~~l~~l------~~L~~L~L~~n 272 (967)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++|+ +++ .+|..+..+ ++|++|+|++|
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN 315 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSS
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCC
Confidence 888888 99999999999999998999999999999999999998 887 788888776 89999999999
Q ss_pred CCCCcCch--hhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCC-CcEEEccCCcCcCC
Q 002094 273 SFTGEVPD--WIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGN-LLAIDVSQNKLTGN 349 (967)
Q Consensus 273 ~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~ 349 (967)
+++ .+|. .++.+++|++|++++|+++|.+| .+..+++|++|++++|+++ .+|..+..+++ |+.|++++|+++ .
T Consensus 316 ~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~ 391 (636)
T 4eco_A 316 NLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-Y 391 (636)
T ss_dssp CCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-S
T ss_pred cCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-c
Confidence 998 7777 88999999999999999988888 8888999999999999988 77888888888 999999999888 5
Q ss_pred CChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcc-------cccccchhccccccc
Q 002094 350 IPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIG-------DLSSLMLLNMSMNYL 422 (967)
Q Consensus 350 ~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l 422 (967)
+|..+.. ..+++|++|++++|++++.+|..+. .+++|++|+|++|++
T Consensus 392 lp~~~~~--------------------------~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l 445 (636)
T 4eco_A 392 IPNIFDA--------------------------KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQI 445 (636)
T ss_dssp CCSCCCT--------------------------TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCC
T ss_pred cchhhhh--------------------------cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCcc
Confidence 6643321 1235799999999999999999998 888999999999999
Q ss_pred ccccCCCcCCcccccEEEecCCcccccCcccccC-C-------CCCCEEEcCCCCCCCcCCcccc--ccCccceeeccCC
Q 002094 423 FGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGG-A-------VSLKELKLEKNFLSGRIPSQIK--NCSSLTSLILSQN 492 (967)
Q Consensus 423 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N 492 (967)
.+..+..+..+++|++|+|++|+++ .+|..+.. . ++|++|+|++|+++ .+|..+. .+++|+.|+|++|
T Consensus 446 ~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 523 (636)
T 4eco_A 446 SKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYN 523 (636)
T ss_dssp CSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSS
T ss_pred CcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCC
Confidence 8444444566999999999999999 66655443 2 29999999999999 7888887 9999999999999
Q ss_pred cCcCccchhhhcccCccEEec------cCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCCCC
Q 002094 493 NLTGPVPAAIANLSNLKYVDL------SFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSL 566 (967)
Q Consensus 493 ~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 566 (967)
+|++ +|..+.++++|++|+| ++|++.+.+|..+..+++|+.|+|++|++ +.+|.. +...+....+.+|++.
T Consensus 524 ~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 524 SFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNI 600 (636)
T ss_dssp CCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTC
T ss_pred CCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCc
Confidence 9997 8999999999999999 56889999999999999999999999999 789875 3466777788999988
Q ss_pred CCc
Q 002094 567 CGS 569 (967)
Q Consensus 567 c~~ 569 (967)
|-.
T Consensus 601 ~~~ 603 (636)
T 4eco_A 601 SID 603 (636)
T ss_dssp EEE
T ss_pred ccc
Confidence 744
No 20
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-49 Score=470.66 Aligned_cols=465 Identities=21% Similarity=0.239 Sum_probs=404.3
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
+++++|+|++|++++..+..|+.+++|++|+|++|++++ ++...|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc-cCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 579999999999999989999999999999999999985 5556689999999999999999998889999999999999
Q ss_pred ecccccccccCccccccccCCeEeecCCcCCC-cccccccCCCCCCeeeccCccccccCCcCccCCCCc----cEEeccc
Q 002094 173 FSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEG-EIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSML----KVLDFGV 247 (967)
Q Consensus 173 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~l~~ 247 (967)
|++|++++..+..++.+++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..++.+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 99999997766689999999999999999997 468999999999999999999998888899999988 8999999
Q ss_pred cccCCCCChhhhcCCCCCEEEccCCCCCC-cCchh------------------------------hcccc--cccccccc
Q 002094 248 NSLSGSLPDSLQRLNSCSSLSLKGNSFTG-EVPDW------------------------------IGKLA--NLESLDLS 294 (967)
Q Consensus 248 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~------------------------------l~~l~--~L~~L~L~ 294 (967)
|.+++..|..+..+ +|+.|++++|.... ..+.. +..+. .++.++++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99998888888776 89999999985331 11222 22222 24455666
Q ss_pred cc-ccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCC
Q 002094 295 LN-QFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESM 373 (967)
Q Consensus 295 ~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~ 373 (967)
+| .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|.. ...+|+.|++++|.+....
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~-~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTL-KLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBC-BCSSCCEEEEESCBSCCBC
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcc-cccccCEEeCcCCcccccc
Confidence 66 677788889999999999999999998 578888888 9999999999998 66653 3358999999999986543
Q ss_pred CCCcccccccCCCCccEEEccCCcccCCC--CCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCc
Q 002094 374 QYPSFASMKDSYQGLQVLDLSSNALSGVI--PSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIP 451 (967)
Q Consensus 374 ~~~~~~~~~~~~~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 451 (967)
.. ..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+. +..+++|+.|++++|++.+..|
T Consensus 342 ~~-------~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~ 413 (570)
T 2z63_A 342 SE-------VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSE 413 (570)
T ss_dssp CC-------CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTT
T ss_pred cc-------ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccc
Confidence 21 46789999999999998664 67788999999999999999866555 9999999999999999997766
Q ss_pred -ccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCc-CccchhhhcccCccEEeccCCccccCCchhhhhc
Q 002094 452 -PQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLT-GPVPAAIANLSNLKYVDLSFNDLSGILPKELINL 529 (967)
Q Consensus 452 -~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 529 (967)
..+..+++|++|++++|.+.+..|..|..+++|+.|+|++|.++ +.+|..|..+++|++|+|++|++++..|..|..+
T Consensus 414 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 493 (570)
T 2z63_A 414 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493 (570)
T ss_dssp SCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcc
Confidence 57899999999999999999999999999999999999999998 6799999999999999999999999999999999
Q ss_pred cCCceEEecCCcccccCCCC-CCCCccCCCcccCCCCCCCccc
Q 002094 530 SHLLSFNISHNHLHGELPVG-GFFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 530 ~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~ 571 (967)
++|+.|++++|++++.+|.. ..+..+....+.+||+.|.++.
T Consensus 494 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 494 SSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999866542 2345566777899999998754
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4e-49 Score=480.85 Aligned_cols=460 Identities=20% Similarity=0.210 Sum_probs=309.1
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEc-CCCCCCCCCCchhhhcCCC--------CceEec-------cccccCC
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDF-SENNLSGLIPDEFFRQCGS--------LREVSF-------ANNNLTG 156 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L-s~n~~~~~ip~~~~~~l~~--------L~~L~L-------~~n~l~~ 156 (967)
.+++.|+|++|+++|.+|+.|+.|++|++|+| ++|.++|..|......... ++..++ ...++.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9998887755321100000 000000 0000000
Q ss_pred -----------CCccccccccccceeeecc--cccccccCccccccccCCeEeecCCcCCC-----------------cc
Q 002094 157 -----------PIPESLSFCSSLESVNFSS--NRLSGQLPYGIWFLRSLQSLDLSNNLLEG-----------------EI 206 (967)
Q Consensus 157 -----------~~p~~l~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~ 206 (967)
..+........++.+.+.. |++++ +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0011111222333333333 55655 55556666666666666666665 25
Q ss_pred ccccc--CCCCCCeeeccCccccccCCcCccCCCCccEEeccccc-cCC-CCChhhhcCC-------CCCEEEccCCCCC
Q 002094 207 VKGIS--NLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNS-LSG-SLPDSLQRLN-------SCSSLSLKGNSFT 275 (967)
Q Consensus 207 ~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~~~l~~l~-------~L~~L~L~~n~l~ 275 (967)
|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++|+ +++ .+|..+..++ +|+.|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 55555 66666666666666666666666666666666666665 655 5555555444 6666666666666
Q ss_pred CcCch--hhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCC-CcEEEccCCcCcCCCCh
Q 002094 276 GEVPD--WIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGN-LLAIDVSQNKLTGNIPT 352 (967)
Q Consensus 276 ~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~ 352 (967)
.+|. .++++++|+.|+|++|+++ .+| .++.+++|+.|+|++|+++ .+|..+.++++ |+.|++++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 5555 5666666666666666666 555 5666666666666666666 55666666666 666666666666 4554
Q ss_pred hhhcc---cccEEeccCCCCCCCCCCCccccccc--CCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccC
Q 002094 353 WIFKM---GLQTVSLSGNRLGESMQYPSFASMKD--SYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIP 427 (967)
Q Consensus 353 ~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~--~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 427 (967)
.+... +|+.|+|++|++.... +.+..... ..++|+.|+|++|+++...+..+..+++|+.|+|++|++. .+|
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~i--p~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip 713 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEG--RNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIP 713 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTS--SSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCC
T ss_pred hhhccccCCCCEEECcCCcCCCcc--ccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccC
Confidence 44332 2666666666664422 11111111 2358999999999999554444568999999999999998 666
Q ss_pred CCcCC--------cccccEEEecCCcccccCccccc--CCCCCCEEEcCCCCCCCcCCccccccCccceeeccC------
Q 002094 428 ASIGK--------LKAIQVLDFSDNWLNGTIPPQIG--GAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQ------ 491 (967)
Q Consensus 428 ~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~------ 491 (967)
..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..++.+++|+.|+|++
T Consensus 714 ~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~ 791 (876)
T 4ecn_A 714 ENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEG 791 (876)
T ss_dssp TTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTC
T ss_pred hHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCccc
Confidence 65443 339999999999999 7888887 99999999999999997 799999999999999977
Q ss_pred CcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCC--ccCCCcccCCCCCC
Q 002094 492 NNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFN--TISPSSVSGNPSLC 567 (967)
Q Consensus 492 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~--~~~~~~~~~n~~lc 567 (967)
|++.+.+|..|.++++|+.|+|++|++ +.+|..+. ++|+.|+|++|++...-+ ..+.. ......+.+|++.|
T Consensus 792 N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~-~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 792 NRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDV-TSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEEC-GGGHHHHHTTCCEEECCTTSE
T ss_pred ccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccCh-HHccccccchheeecCCCccc
Confidence 889999999999999999999999999 68888765 699999999999974332 22211 12344566777655
No 22
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.9e-49 Score=434.35 Aligned_cols=267 Identities=27% Similarity=0.348 Sum_probs=221.7
Q ss_pred hhccCCCCccCCCCceEEEEEEeCC------CcEEEEEEeecCCccccHHHHHHHHHHHcCCCC-CceeeeeeEEEcC-C
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQD------GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRH-HNLVALEGYYWTP-S 752 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~-~ 752 (967)
.+.|+..+.||+|+||+||+|.+.. ++.||||++.........++|.+|++++++++| ||||+++|+|.++ +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 3457888899999999999998542 368999999876655556789999999999965 8999999999765 5
Q ss_pred ceeEEEEecCCCchhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSS-------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG 819 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~ 819 (967)
..++|||||++|+|.++++.... ...+++.++..++.|||.||+|||+++||||||||+|||+++++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~ 222 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 222 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCC
Confidence 68999999999999999975422 23489999999999999999999999999999999999999999
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 898 (967)
.+||+|||+|+...........+...||+.|+|||++ ....++.++|||||||++|||+| |+.||.......... ..
T Consensus 223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l-~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~-~~ 300 (353)
T 4ase_A 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-RR 300 (353)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH-HH
T ss_pred CEEECcchhhhhcccCCCceeeccccccccccCHHHH-hcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHH-HH
Confidence 9999999999877554444455567899999999998 66789999999999999999998 999998655432211 11
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
+....+...|..++.++.+++.+||+.||++||||+|+++.|+.+.+.-.+
T Consensus 301 -------------i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 301 -------------LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp -------------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred -------------HHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 122234456677888999999999999999999999999999998765443
No 23
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-49 Score=463.20 Aligned_cols=457 Identities=20% Similarity=0.210 Sum_probs=379.0
Q ss_pred eeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccc
Q 002094 72 VGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFAN 151 (967)
Q Consensus 72 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~ 151 (967)
..|++++++++. +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|. .|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDIS-VFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGG-GGTTCTTCCEEECCS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChH-HhhcccCCCEEecCC
Confidence 357888888884 677666 8999999999999988888999999999999999999865454 468999999999999
Q ss_pred cccCCCCccccccccccceeeeccccccc-ccCccccccccCCeEeecCCcCCCcccccccCCCCC--CeeeccCccc--
Q 002094 152 NNLTGPIPESLSFCSSLESVNFSSNRLSG-QLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDL--RAIKLGKNKF-- 226 (967)
Q Consensus 152 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l-- 226 (967)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|+|++|.+++ ..+..+++| ++|++++|++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9998 45655 88999999999999987 468889999999999999999886 456667777 9999999999
Q ss_pred cccCCcCccCCC-CccEEeccccccCCCCCh-hhhcCCCCCEEEccCCC-------CCCcCchhhccccccccccccccc
Q 002094 227 SGQLPEDIGGCS-MLKVLDFGVNSLSGSLPD-SLQRLNSCSSLSLKGNS-------FTGEVPDWIGKLANLESLDLSLNQ 297 (967)
Q Consensus 227 ~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~-~l~~l~~L~~L~L~~n~-------l~~~~~~~l~~l~~L~~L~L~~N~ 297 (967)
.+..|..+..++ +...+++++|++.+.++. .+.++++|+.|++++|. +.+.++ .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 778888888776 455678888888765544 57788999999999987 665555 68889999999999988
Q ss_pred cccccCCCCC---cccccceEEcccCcCCCCCChhh-----hcCCCCcEEEccCCcCcCCCC-hhhhc----ccccEEec
Q 002094 298 FSGRIPSSIG---NLVFLKELNISMNQFTGGLPESM-----MNCGNLLAIDVSQNKLTGNIP-TWIFK----MGLQTVSL 364 (967)
Q Consensus 298 l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~p-~~~~~----~~L~~L~L 364 (967)
+++..+..+. ..++|++|++++|++++.+|..+ .++++|+.+++++|.+ .+| ..+.. .+++.|++
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEc
Confidence 8754322221 13589999999999998888888 8899999999999998 566 33332 36999999
Q ss_pred cCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhccccccccc--ccCCCcCCcccccEEEec
Q 002094 365 SGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFG--SIPASIGKLKAIQVLDFS 442 (967)
Q Consensus 365 ~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls 442 (967)
++|.+..... ...+++|++|++++|++++.+|..+..+++|++|++++|++.+ .+|..+..+++|++|+++
T Consensus 310 ~~n~l~~~~~-------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls 382 (520)
T 2z7x_B 310 SGTRMVHMLC-------PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDIS 382 (520)
T ss_dssp ESSCCCCCCC-------CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECC
T ss_pred CCCccccccc-------hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECC
Confidence 9998865321 1467899999999999999899999999999999999999986 567889999999999999
Q ss_pred CCcccccCcc-cccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccC
Q 002094 443 DNWLNGTIPP-QIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGI 521 (967)
Q Consensus 443 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 521 (967)
+|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++.
T Consensus 383 ~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l 459 (520)
T 2z7x_B 383 QNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSV 459 (520)
T ss_dssp SSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCcc
Confidence 9999975665 488899999999999999988877665 79999999999999 7888888999999999999999954
Q ss_pred CchhhhhccCCceEEecCCcccccCCCCCC
Q 002094 522 LPKELINLSHLLSFNISHNHLHGELPVGGF 551 (967)
Q Consensus 522 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 551 (967)
.+..+..+++|+.|++++|+++|.++...+
T Consensus 460 ~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 460 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred CHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 444589999999999999999988775443
No 24
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3e-48 Score=461.72 Aligned_cols=478 Identities=19% Similarity=0.174 Sum_probs=397.1
Q ss_pred eeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccc
Q 002094 74 LTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNN 153 (967)
Q Consensus 74 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~ 153 (967)
.+.++++++. +|..+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..| ..|+.+++|++|+|++|+
T Consensus 10 c~~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 10 CDGRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG-DAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EECTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTSC
T ss_pred EECCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh-hhccccccCCEEECCCCc
Confidence 5777777764 565554 799999999999999999999999999999999999996544 457999999999999999
Q ss_pred cCCCCccccccccccceeeeccccccc-ccCccccccccCCeEeecCCc-CCCcccccccCCCCCCeeeccCccccccCC
Q 002094 154 LTGPIPESLSFCSSLESVNFSSNRLSG-QLPYGIWFLRSLQSLDLSNNL-LEGEIVKGISNLYDLRAIKLGKNKFSGQLP 231 (967)
Q Consensus 154 l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 231 (967)
+++..|..|+++++|++|+|++|++++ ..|..+.++++|++|+|++|. +....+..|.++++|++|++++|++++..|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 999888889999999999999999997 357789999999999999998 454555789999999999999999999999
Q ss_pred cCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcC--c-hhhccccccccccccccccccccC----C
Q 002094 232 EDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEV--P-DWIGKLANLESLDLSLNQFSGRIP----S 304 (967)
Q Consensus 232 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~-~~l~~l~~L~~L~L~~N~l~~~~~----~ 304 (967)
..++.+++|++|+++.|.+.......+..+++|++|++++|++++.. + .....+++|+.|++++|.+++..+ .
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~ 245 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245 (549)
T ss_dssp TTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHG
T ss_pred hhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHH
Confidence 99999999999999999987433333467999999999999999752 2 233567899999999999986543 3
Q ss_pred CCCcccccceEEcccCcCCCCC------ChhhhcCCCCcEEEccCCcCcCC-----CChhhh-cccccEEeccCCCCCCC
Q 002094 305 SIGNLVFLKELNISMNQFTGGL------PESMMNCGNLLAIDVSQNKLTGN-----IPTWIF-KMGLQTVSLSGNRLGES 372 (967)
Q Consensus 305 ~~~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~l~~N~l~~~-----~p~~~~-~~~L~~L~L~~n~l~~~ 372 (967)
.+..+++|+.|++++|.+.+.. ...+..+++|+.|+++++.+... ++.... ..+++.|++++|.+...
T Consensus 246 ~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~i 325 (549)
T 2z81_A 246 LLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLV 325 (549)
T ss_dssp GGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCC
T ss_pred HhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccC
Confidence 4566789999999999987632 23456788999999999987632 222111 24799999999998643
Q ss_pred CCCCcccccccCCCCccEEEccCCcccCCCC---CCcccccccchhcccccccccccC--CCcCCcccccEEEecCCccc
Q 002094 373 MQYPSFASMKDSYQGLQVLDLSSNALSGVIP---SNIGDLSSLMLLNMSMNYLFGSIP--ASIGKLKAIQVLDFSDNWLN 447 (967)
Q Consensus 373 ~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~ 447 (967)
. ...+..+++|++|++++|++++.+| ..++.+++|++|+|++|++.+..+ ..+..+++|++|++++|+++
T Consensus 326 p-----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 400 (549)
T 2z81_A 326 P-----CSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400 (549)
T ss_dssp C-----HHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred C-----HHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc
Confidence 2 1223457899999999999998663 457889999999999999986543 56889999999999999998
Q ss_pred ccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhh
Q 002094 448 GTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELI 527 (967)
Q Consensus 448 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 527 (967)
.+|..+..+++|++|+|++|++++ +|..+ .++|+.|+|++|+|++.+ ..+++|++|||++|+|+ .+|. ..
T Consensus 401 -~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~ 470 (549)
T 2z81_A 401 -PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-AS 470 (549)
T ss_dssp -CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GG
T ss_pred -cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cc
Confidence 689899999999999999999984 44443 268999999999999753 57899999999999999 5665 56
Q ss_pred hccCCceEEecCCcccccCCC-CCCCCccCCCcccCCCCCCCcc
Q 002094 528 NLSHLLSFNISHNHLHGELPV-GGFFNTISPSSVSGNPSLCGSV 570 (967)
Q Consensus 528 ~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~lc~~~ 570 (967)
.+++|+.|+|++|++++.+|. ...+..+....+.+|||.|+|+
T Consensus 471 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 471 LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp GCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 899999999999999987764 2335566777889999999886
No 25
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.6e-49 Score=428.56 Aligned_cols=251 Identities=21% Similarity=0.379 Sum_probs=204.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 35788899999999999999964 699999999976543 3346789999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
||+||+|.+++...... .+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.... ...
T Consensus 104 y~~gg~L~~~i~~~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~~~ 180 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGV-LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--TVE 180 (350)
T ss_dssp CCTTCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH--HHH
T ss_pred CCCCCcHHHHHHHcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC--Ccc
Confidence 99999999999765432 378999999999999999999999999999999999999999999999999987643 112
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......||+.|+|||++ .+..++.++||||+||++|||++|+.||...... ..+..+..+. ...
T Consensus 181 ~~~~~~GT~~YmAPE~l-~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~--------------~~~ 244 (350)
T 4b9d_A 181 LARACIGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGS--------------FPP 244 (350)
T ss_dssp HHHHHHSCCTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTC--------------CCC
T ss_pred cccccCCCccccCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCC--------------CCC
Confidence 23456799999999998 6668999999999999999999999999754322 2222222111 112
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+...+.++.++|.+|++.||++|||++|+++
T Consensus 245 ~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 34556778999999999999999999999976
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=9.4e-49 Score=418.92 Aligned_cols=248 Identities=19% Similarity=0.254 Sum_probs=210.8
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4788899999999999999964 689999999975432 2346789999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
||+||+|.+++..... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+.......
T Consensus 113 y~~gG~L~~~i~~~~~---l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~ 189 (311)
T 4aw0_A 113 YAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 189 (311)
T ss_dssp CCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred cCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence 9999999999986543 8999999999999999999999999999999999999999999999999999875434434
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......||+.|+|||++ .+..++.++||||+||++|||++|++||..... ...+..+... ...
T Consensus 190 ~~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~~---------------~~~ 252 (311)
T 4aw0_A 190 RANSFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKIIKL---------------EYD 252 (311)
T ss_dssp CBCCCCSCGGGCCHHHH-HHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHT---------------CCC
T ss_pred cccCcccCcccCCHHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcC---------------CCC
Confidence 45567899999999998 666789999999999999999999999975432 2222222211 123
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVV 950 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl 950 (967)
+|...+.++.+++.+|++.||++|||++|++
T Consensus 253 ~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 253 FPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 4555677899999999999999999999864
No 27
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.9e-48 Score=421.58 Aligned_cols=248 Identities=21% Similarity=0.332 Sum_probs=207.1
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
.|+..+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4677789999999999999965 69999999997654 234567899999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
+||+|.+++... .+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...... ...
T Consensus 154 ~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRR 227 (346)
T ss_dssp TTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCB
T ss_pred CCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Ccc
Confidence 999999999753 28999999999999999999999999999999999999999999999999998764322 223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFP 921 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (967)
....||+.|+|||++ ....++.++||||+||++|||++|++||...... ..+. .+.... ......+
T Consensus 228 ~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~-~i~~~~-----------~~~~~~~ 293 (346)
T 4fih_A 228 KSLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMK-MIRDNL-----------PPRLKNL 293 (346)
T ss_dssp CCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHH-HHHHSS-----------CCCCSCG
T ss_pred cccccCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHH-HHHcCC-----------CCCCCcc
Confidence 467899999999998 6668999999999999999999999999754322 1111 111100 0011223
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 922 ADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+.++.+++.+|++.||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 456678999999999999999999999875
No 28
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-48 Score=421.62 Aligned_cols=255 Identities=21% Similarity=0.244 Sum_probs=207.7
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
.|+..++||+|+||.||+|+.+ +|+.||||+++.... ..+|++++++++|||||++++++.+++..|+|||||
T Consensus 59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred heEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4566778999999999999965 689999999976542 246999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC-CeEEeecccccccCCCccc--
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG-EPKVGDFGLARLLPMLDRC-- 838 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~-- 838 (967)
+||+|.++++.... +++..+..++.||+.||+|||+++|+||||||+|||++.+| ++||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 133 EGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp TTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred CCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99999999986543 89999999999999999999999999999999999999987 6999999999876532211
Q ss_pred -cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 839 -ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 839 -~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
.......||+.|+|||++ .+..++.++||||+||++|||++|++||....... ....+.... ...
T Consensus 210 ~~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~------------~~~ 275 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVV-MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEP------------PPI 275 (336)
T ss_dssp ----CCCCCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSC------------CGG
T ss_pred eecCCccccCccccCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCC------------CCc
Confidence 122346799999999998 56689999999999999999999999997543321 122222110 001
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
...++..+..+.+++.+|+++||++|||++|+++.|....++.
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 1245667788999999999999999999999999887765443
No 29
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.6e-48 Score=412.12 Aligned_cols=246 Identities=28% Similarity=0.417 Sum_probs=198.8
Q ss_pred cCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEc----CCceeEE
Q 002094 684 LNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWT----PSLQLLI 757 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 757 (967)
|+..++||+|+||+||+|... +++.||||++..... ....+.|.+|++++++++|||||++++++.+ +...++|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 455678999999999999965 589999999976543 3345779999999999999999999999864 3457899
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCEEeC-CCCCeEEeecccccccCC
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN--IIHYNLKSTNVLID-SSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--ivH~Dik~~Nill~-~~~~~kl~Dfg~a~~~~~ 834 (967)
||||+||+|.+++++... +++..+..++.||+.||+|||+++ |+||||||+|||++ .++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999986543 899999999999999999999998 99999999999998 479999999999986432
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
.......||+.|+|||++ .+ .++.++|||||||++|||+||+.||.......... ..+ ..+..
T Consensus 185 ----~~~~~~~GTp~YmAPE~~-~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~-~~i----~~~~~------ 247 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMY-EE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY-RRV----TSGVK------ 247 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGG-GT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH-HHH----TTTCC------
T ss_pred ----CccCCcccCccccCHHHc-CC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHH-HHH----HcCCC------
Confidence 223456799999999988 33 69999999999999999999999997544332211 111 11100
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...++...+.++.+++.+|++.||++|||++|+++
T Consensus 248 --~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 --PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01122334567999999999999999999999875
No 30
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-47 Score=405.56 Aligned_cols=247 Identities=21% Similarity=0.301 Sum_probs=193.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 34788899999999999999954 699999999976542 234568999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+ +|+|.+++..... +++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC---
Confidence 999 6799999976543 899999999999999999999999999999999999999999999999999865432
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||++.+....+.++||||+||++|||++|+.||...... .....+... ..
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~---------------~~ 229 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNG---------------VY 229 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT---------------CC
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcC---------------CC
Confidence 22345679999999999854444578999999999999999999999753321 111111111 12
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.++...+.++.+++.+|++.||++|||++|+++
T Consensus 230 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 345556778999999999999999999999876
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-47 Score=449.97 Aligned_cols=456 Identities=20% Similarity=0.221 Sum_probs=386.3
Q ss_pred CeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecc
Q 002094 96 QVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSS 175 (967)
Q Consensus 96 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 175 (967)
++|++++|+++ .+|..+. ++|++|+|++|.+++ ++...|.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57999999999 4677666 899999999999995 4545579999999999999999998899999999999999999
Q ss_pred cccccccCccccccccCCeEeecCCcCCC-cccccccCCCCCCeeeccCccccccCCcCccCCCCc--cEEecccccc--
Q 002094 176 NRLSGQLPYGIWFLRSLQSLDLSNNLLEG-EIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSML--KVLDFGVNSL-- 250 (967)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~l~~n~l-- 250 (967)
|+|+ .+|.. .+++|++|+|++|.+++ ..|..|+++++|++|+|++|++++ ..+..+++| ++|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9999 56665 89999999999999998 468999999999999999999986 467778888 9999999999
Q ss_pred CCCCChhhhcCC-CCCEEEccCCCCCCcCc-hhhccccccccccccccc-------cccccCCCCCcccccceEEcccCc
Q 002094 251 SGSLPDSLQRLN-SCSSLSLKGNSFTGEVP-DWIGKLANLESLDLSLNQ-------FSGRIPSSIGNLVFLKELNISMNQ 321 (967)
Q Consensus 251 ~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~N~ 321 (967)
.+..|..+..+. +...+++++|.+.+.++ ..+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888888888776 34467889999877654 467889999999999998 777776 78999999999999999
Q ss_pred CCCCCChhhh---cCCCCcEEEccCCcCcCCCChhh-----hc-ccccEEeccCCCCCCCCCCCcccccccCCCCccEEE
Q 002094 322 FTGGLPESMM---NCGNLLAIDVSQNKLTGNIPTWI-----FK-MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLD 392 (967)
Q Consensus 322 l~~~~~~~~~---~l~~L~~L~l~~N~l~~~~p~~~-----~~-~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~ 392 (967)
+++..+..+. ..++|+.|++++|++++.+|..+ .. ..|+.+++++|.+ .... ..+...+ ...+|+.|+
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~-~~~~~~~-~~~~L~~L~ 308 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQ-SYIYEIF-SNMNIKNFT 308 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCT-HHHHHHH-HTCCCSEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecch-hhhhccc-ccCceeEEE
Confidence 8864433322 25699999999999999999877 33 3799999999998 2211 1111111 115699999
Q ss_pred ccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccc--cCcccccCCCCCCEEEcCCCCC
Q 002094 393 LSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNG--TIPPQIGGAVSLKELKLEKNFL 470 (967)
Q Consensus 393 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l 470 (967)
+++|.+.... .+..+++|++|++++|++.+.+|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++
T Consensus 309 l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l 386 (520)
T 2z7x_B 309 VSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSV 386 (520)
T ss_dssp EESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCC
T ss_pred cCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcC
Confidence 9999987543 23688999999999999999899999999999999999999986 5678899999999999999999
Q ss_pred CCcCCc-cccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCC
Q 002094 471 SGRIPS-QIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG 549 (967)
Q Consensus 471 ~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 549 (967)
++.+|. .+..+++|+.|+|++|++++..|..+. ++|++|||++|+++ .+|..+..+++|+.|++++|+++ .+|..
T Consensus 387 ~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 462 (520)
T 2z7x_B 387 SYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDG 462 (520)
T ss_dssp BCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTT
T ss_pred CcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHH
Confidence 985665 588999999999999999988887765 79999999999999 78888889999999999999999 57754
Q ss_pred C--CCCccCCCcccCCCCCCCccc
Q 002094 550 G--FFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 550 ~--~~~~~~~~~~~~n~~lc~~~~ 571 (967)
. .+..+....+.+||+.|.|++
T Consensus 463 ~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 463 IFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HhccCCcccEEECcCCCCcccCCc
Confidence 2 244566667899999998876
No 32
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4e-47 Score=422.84 Aligned_cols=249 Identities=21% Similarity=0.343 Sum_probs=207.9
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
..|+..++||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 45788889999999999999965 69999999997654 33456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
|+||+|.++++... +++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 230 ~~gG~L~~~i~~~~----l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp CTTEEHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCCcHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 99999999997532 8999999999999999999999999999999999999999999999999998764322 23
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
.....||+.|||||++ ....++.++||||+||++|||++|++||...... ..+ ..+.... .. ....
T Consensus 304 ~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~-~~i~~~~---------~~--~~~~ 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAM-KMIRDNL---------PP--RLKN 369 (423)
T ss_dssp BCCCEECTTTCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHH-HHHHHSC---------CC--CCSC
T ss_pred ccccccCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHH-HHHHcCC---------CC--CCcc
Confidence 3467899999999998 6668999999999999999999999999754322 111 1111100 00 1122
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+...+.++.+|+.+|++.||++|||++|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3455677999999999999999999999876
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.3e-47 Score=411.43 Aligned_cols=260 Identities=23% Similarity=0.313 Sum_probs=200.1
Q ss_pred cCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC----ceeEEEE
Q 002094 684 LNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS----LQLLIYE 759 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e 759 (967)
|...+.||+|+||+||+|+++ |+.||||++.... .....++.|+..+.+++|||||++++++.+++ ..++|||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 456788999999999999984 8999999997543 22233455666677899999999999998654 5689999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CcccCCCCCCCEEeCCCCCeEEeecccccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT--------NIIHYNLKSTNVLIDSSGEPKVGDFGLARL 831 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~--------~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~ 831 (967)
||++|+|.++++... ++|..+.+++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 82 y~~~gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp CCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCCcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999998642 89999999999999999999987 899999999999999999999999999987
Q ss_pred cCCCcccc--ccccccccccccCcccccCc-----ccCCcccchhhHHHHHHHHHcCCCCCCCCccchH----------h
Q 002094 832 LPMLDRCI--LSSKIQSALGYMAPEFACRT-----VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVV----------V 894 (967)
Q Consensus 832 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~----------~ 894 (967)
........ ......||+.|+|||++... ..++.++|||||||++|||+||++||........ .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 65432221 22346799999999988432 2477899999999999999999887753322111 1
Q ss_pred HHHHHHhhhccCCchhhcchhhcCCCC-----hhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 895 LCDMVRGALEDGRVEDCVDARLRGNFP-----ADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
..++... ..+..+++..| .+.+..+.+++.+||+.||++||||+||+++|+++.++
T Consensus 238 ~~~~~~~---------~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKV---------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHH---------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHH---------HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1111111 11222233333 24556799999999999999999999999999998754
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-45 Score=446.72 Aligned_cols=491 Identities=20% Similarity=0.156 Sum_probs=342.1
Q ss_pred CeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEe
Q 002094 69 KRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVS 148 (967)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~ 148 (967)
..++.|+|++|.+++..+.+|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|+++ .+|...|+++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEE
Confidence 46788888888888877778888999999999999888888888888899999999999887 56767788889999999
Q ss_pred ccccccCCCCccccccccccceeeecccccccc-cCccccccccCCeEeecCCcCCCcccccccCCCCCC----eeeccC
Q 002094 149 FANNNLTGPIPESLSFCSSLESVNFSSNRLSGQ-LPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLR----AIKLGK 223 (967)
Q Consensus 149 L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~ 223 (967)
|++|++++..+..|+++++|++|+|++|++++. .|..+..+++|++|+|++|++++..+..|..+.+++ .++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 999988887777888888999999999888753 577788888899999999988888888777665544 577888
Q ss_pred ccccccCCcCccCCCCccEEeccccccCCC-CChhhhcCCCCCEEEccCCC------CCCc-------------------
Q 002094 224 NKFSGQLPEDIGGCSMLKVLDFGVNSLSGS-LPDSLQRLNSCSSLSLKGNS------FTGE------------------- 277 (967)
Q Consensus 224 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~L~~n~------l~~~------------------- 277 (967)
|.++...+..+. ...++.+++.+|..... .+..+..+..++...+..+. +...
T Consensus 211 n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 888765544443 34566677776654421 23334455555544432221 1111
Q ss_pred --------CchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCC
Q 002094 278 --------VPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGN 349 (967)
Q Consensus 278 --------~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 349 (967)
....+..+.+++.+++.+|.+.... .+.....|+.|++.+|.+....+. .++.|+.++++.|.+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~- 363 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGN- 363 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCC-
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCC-
Confidence 1122334445555555555554321 244455666677776666644332 34556666666666552
Q ss_pred CChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccC-C
Q 002094 350 IPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIP-A 428 (967)
Q Consensus 350 ~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~ 428 (967)
.+......+|+.|++++|.+...... ........+|+.|+++.|.+.. .+..+..+++|+.+++++|......+ .
T Consensus 364 ~~~~~~l~~L~~L~ls~n~l~~~~~~---~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~ 439 (635)
T 4g8a_A 364 AFSEVDLPSLEFLDLSRNGLSFKGCC---SQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS 439 (635)
T ss_dssp BCCCCBCTTCCEEECCSSCCBEEEEC---CHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSC
T ss_pred Ccccccccccccchhhcccccccccc---ccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccc
Confidence 22333334677777777776432211 1122345667777777777764 34556777888888887777665443 4
Q ss_pred CcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCC-CCcCCccccccCccceeeccCCcCcCccchhhhcccC
Q 002094 429 SIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFL-SGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSN 507 (967)
Q Consensus 429 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 507 (967)
.+..+.+++.++++.|.+.+..+..+..+++|+.|+|++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.++++
T Consensus 440 ~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~ 519 (635)
T 4g8a_A 440 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 519 (635)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCC
Confidence 567788888888888888877777788888888888888864 3456777888888888888888888877888888888
Q ss_pred ccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCC--CCCccCCCcccCCCCCCCccc
Q 002094 508 LKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGG--FFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 508 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~lc~~~~ 571 (967)
|++|+|++|+|++..|..|..+++|+.|+|++|++++.+|..- ....+....+.+|||.|+|.+
T Consensus 520 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 520 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 8888888888888888888888888888888888887666421 113455556788888888765
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-47 Score=409.44 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=196.1
Q ss_pred ccCCCCccCCCCceEEEEEEeC----CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ----DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
.|+..+.||+|+||+||+|+.. .++.||||++..... ......+.+|++++++++|||||++++++.+++..|+|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4788899999999999999852 478999999976532 23345688999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
||||+||+|.+++.+... +++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 105 mEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 179 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-- 179 (304)
T ss_dssp ECCCTTCEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------
T ss_pred EEcCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC--
Confidence 999999999999987543 899999999999999999999999999999999999999999999999999865331
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ ....++.++||||+||++|||++|+.||...... ..+..+... .
T Consensus 180 ~~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~---------------~ 242 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKA---------------K 242 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC---------------C
T ss_pred CccccccccCcccCCHHHh-ccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HHHHHHHcC---------------C
Confidence 2233457799999999998 6668999999999999999999999999754332 222222111 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
..+|...+.++.+++.+|++.||++|||+
T Consensus 243 ~~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 243 LGMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 23455667789999999999999999985
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.7e-46 Score=445.26 Aligned_cols=458 Identities=19% Similarity=0.167 Sum_probs=378.1
Q ss_pred eeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccc
Q 002094 72 VGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFAN 151 (967)
Q Consensus 72 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~ 151 (967)
..+++.++++++ +|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|++++..| ..|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDF-HVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECT-TTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCH-HHhCCCCCCCEEECCC
Confidence 677888888886 676664 899999999999999988999999999999999999996545 4579999999999999
Q ss_pred cccCCCCccccccccccceeeecccccccc-cCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccc--cc
Q 002094 152 NNLTGPIPESLSFCSSLESVNFSSNRLSGQ-LPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKF--SG 228 (967)
Q Consensus 152 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l--~~ 228 (967)
|+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|.+++.....+.++ +|++|++++|++ ++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L-~L~~L~L~~n~l~~~~ 185 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL-HLSCILLDLVSYHIKG 185 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTS-CEEEEEEEESSCCCCS
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhc-eeeEEEeecccccccc
Confidence 9999 56655 899999999999999973 46899999999999999999986443334444 449999999999 88
Q ss_pred cCCcCccCCC-CccEEeccccccCCCCCh-hhhcCCCCCEEEccCCCC-----CCcCchhhccccccccccccccccccc
Q 002094 229 QLPEDIGGCS-MLKVLDFGVNSLSGSLPD-SLQRLNSCSSLSLKGNSF-----TGEVPDWIGKLANLESLDLSLNQFSGR 301 (967)
Q Consensus 229 ~~~~~~~~l~-~L~~L~l~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l-----~~~~~~~l~~l~~L~~L~L~~N~l~~~ 301 (967)
..|..|..++ ..-.++++.|.+.+.++. .+..+++|+.|++++|+. .+ ....+..+++|+.|+++++.+.+.
T Consensus 186 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~ 264 (562)
T 3a79_B 186 GETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWK 264 (562)
T ss_dssp SSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHH
T ss_pred cCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHH
Confidence 8888888765 222568899998876554 467789999999999862 22 234577888888888888777642
Q ss_pred c----CCCCCcccccceEEcccCcCCCCCChhh-----hcCCCCcEEEccCCcCcCCCCh-hhh----cccccEEeccCC
Q 002094 302 I----PSSIGNLVFLKELNISMNQFTGGLPESM-----MNCGNLLAIDVSQNKLTGNIPT-WIF----KMGLQTVSLSGN 367 (967)
Q Consensus 302 ~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~p~-~~~----~~~L~~L~L~~n 367 (967)
. +..+ ..++|++|++++|++++.+|..+ .+++.|+.++++.|.+ .+|. .++ ..+++.|++++|
T Consensus 265 ~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 265 CSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp HHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESS
T ss_pred HHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCC
Confidence 1 1111 23489999999999998888887 7888888888888887 4563 322 246999999999
Q ss_pred CCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhccccccccc--ccCCCcCCcccccEEEecCCc
Q 002094 368 RLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFG--SIPASIGKLKAIQVLDFSDNW 445 (967)
Q Consensus 368 ~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 445 (967)
.+..... ...+++|++|++++|++++.+|..+..+++|++|+|++|++.+ .+|..+..+++|++|++++|+
T Consensus 342 ~~~~~~~-------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 342 PFIHMVC-------PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp CCCCCCC-------CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred CcccccC-------ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 9864321 1467899999999999999999999999999999999999986 446789999999999999999
Q ss_pred ccccCcc-cccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCch
Q 002094 446 LNGTIPP-QIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPK 524 (967)
Q Consensus 446 l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 524 (967)
+++.+|. .+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+.++++|++|+|++|+|++..+.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHH
Confidence 9985555 588899999999999999988777665 79999999999999 6777777999999999999999954444
Q ss_pred hhhhccCCceEEecCCcccccCCCCCC
Q 002094 525 ELINLSHLLSFNISHNHLHGELPVGGF 551 (967)
Q Consensus 525 ~l~~l~~L~~L~l~~N~l~~~~p~~~~ 551 (967)
.+..+++|+.|++++|+|+|.+|...+
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp STTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred HHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 499999999999999999998886544
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.8e-46 Score=401.54 Aligned_cols=247 Identities=21% Similarity=0.351 Sum_probs=190.0
Q ss_pred cCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC----------
Q 002094 684 LNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS---------- 752 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---------- 752 (967)
|+..+.||+|+||+||+|+.+ +|+.||||++.........+.+.+|++++++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 677889999999999999965 689999999987664455678999999999999999999999987544
Q ss_pred --ceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 753 --LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 753 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~ 166 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccce
Confidence 368999999999999999876554446778889999999999999999999999999999999999999999999998
Q ss_pred ccCCCccc----------cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHH
Q 002094 831 LLPMLDRC----------ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVR 900 (967)
Q Consensus 831 ~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~ 900 (967)
........ ...+...||+.|+|||++ .+..++.++||||+||++|||++ ||....+... .+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~----~~~ 238 (299)
T 4g31_A 167 AMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI-HGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR----TLT 238 (299)
T ss_dssp -------------------------CCCTTSCHHHH-TTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH----HHH
T ss_pred ecCCCccccccccccccccccCCcccCccccCHHHH-cCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH----HHH
Confidence 76432211 112345799999999998 56689999999999999999996 7753211111 111
Q ss_pred hhhccCCchhhcchhhcCCCC---hhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 901 GALEDGRVEDCVDARLRGNFP---ADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.. . ...+| ......+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~-~------------~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DV-R------------NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH-H------------TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-h------------cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 1 11122 223345778999999999999999999876
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2e-44 Score=429.04 Aligned_cols=457 Identities=22% Similarity=0.241 Sum_probs=369.8
Q ss_pred CCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeee
Q 002094 94 FLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNF 173 (967)
Q Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 173 (967)
..+++++++|++++ +|..+. ++|++|+|++|.+++ ++...|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISE-LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCC-CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccc-cChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 34899999999996 676554 899999999999995 55556799999999999999999999999999999999999
Q ss_pred cccccccccCccccccccCCeEeecCCcCCCc-ccccccCCCCCCeeeccCccccccCCcCccCCCCc--cEEecccccc
Q 002094 174 SSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGE-IVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSML--KVLDFGVNSL 250 (967)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~l~~n~l 250 (967)
++|+|+ .+|.. .+++|++|+|++|.+++. .|..|+++++|++|+|++|++++ ..+..+++| ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccc
Confidence 999999 56766 899999999999999974 46899999999999999999986 355666666 9999999999
Q ss_pred --CCCCChhhhcCC--CCCEEEccCCCCCCcCch-hhccccccccccccccc-----cccccCCCCCcccccceEEcccC
Q 002094 251 --SGSLPDSLQRLN--SCSSLSLKGNSFTGEVPD-WIGKLANLESLDLSLNQ-----FSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 251 --~~~~~~~l~~l~--~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~N~-----l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
++..|..+..+. .+ .+++++|.+.+.++. .+..+++|+.|++++|+ +.+.+ ..+..+++|+.|+++++
T Consensus 182 ~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEE
T ss_pred cccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCC
Confidence 888898888765 33 568899998876553 56789999999999985 33222 34677888999999888
Q ss_pred cCCCCCChh---hhcCCCCcEEEccCCcCcCCCChhhhc---cc---ccEEeccCCCCCCCCCCCcccccccCCCCccEE
Q 002094 321 QFTGGLPES---MMNCGNLLAIDVSQNKLTGNIPTWIFK---MG---LQTVSLSGNRLGESMQYPSFASMKDSYQGLQVL 391 (967)
Q Consensus 321 ~l~~~~~~~---~~~l~~L~~L~l~~N~l~~~~p~~~~~---~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L 391 (967)
.+.+..... ....++|+.|++++|++++.+|..++. .+ |+.+++..|.+ .... ..+...+ ...+|++|
T Consensus 260 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~-~~~~~~~-~~~~L~~L 336 (562)
T 3a79_B 260 ETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSK-EALYSVF-AEMNIKML 336 (562)
T ss_dssp EECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCH-HHHHHHH-HTCCCSEE
T ss_pred cCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecCh-hhhhhhh-ccCcceEE
Confidence 877432111 123459999999999999999987642 23 44445555544 1110 0011111 12579999
Q ss_pred EccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccc--cCcccccCCCCCCEEEcCCCC
Q 002094 392 DLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNG--TIPPQIGGAVSLKELKLEKNF 469 (967)
Q Consensus 392 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 469 (967)
++++|.+.... ....+++|++|++++|++.+.+|..+.++++|++|+|++|++++ .+|..+..+++|++|+|++|+
T Consensus 337 ~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 337 SISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp EEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred EccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 99999987433 12688999999999999999999999999999999999999996 345779999999999999999
Q ss_pred CCCcCCc-cccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCC
Q 002094 470 LSGRIPS-QIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPV 548 (967)
Q Consensus 470 l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 548 (967)
+++.+|. .+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~ 490 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPD 490 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCH
Confidence 9985554 688999999999999999988777654 79999999999999 67777779999999999999999 5665
Q ss_pred C--CCCCccCCCcccCCCCCCCccc
Q 002094 549 G--GFFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 549 ~--~~~~~~~~~~~~~n~~lc~~~~ 571 (967)
. ..+..+....+.+|||.|+|++
T Consensus 491 ~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 491 GVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCcCCCcch
Confidence 4 3345566777899999998875
No 39
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.4e-44 Score=391.32 Aligned_cols=296 Identities=31% Similarity=0.497 Sum_probs=265.7
Q ss_pred CCChhHHHHHHHHHhcCCCCccccCCCCCCCCCCCc--cceEEeCCCC--CeeeeeeecCCCCCc--cccccccCCCCCC
Q 002094 23 PTFNDDVLGLIVFKAGLEDPKEKLTSWSEDDDNPCN--WVGVKCDPKT--KRVVGLTLDGFSLSG--HIGRGLLRLQFLQ 96 (967)
Q Consensus 23 ~~~~~d~~all~~k~~~~~~~~~l~sw~~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~~--~~~~~l~~l~~L~ 96 (967)
.|.++|++||++||+++.||. .+++|..++ +||. |.||+|+..+ ++|+.|+|.+++++| .+|..+.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~-~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTT-DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTS-CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCC-CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 467899999999999999987 799997754 5788 9999998655 899999999999999 8999999999999
Q ss_pred eEecCC-CccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecc
Q 002094 97 VLSLSN-NNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSS 175 (967)
Q Consensus 97 ~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 175 (967)
+|+|++ |++++.+|..|+.+++|++|+|++|++++.+|.. |..+++|++|+|++|++++.+|..++.+++|++|+|++
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF-LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG-GGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHH-HhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 999995 9999999999999999999999999999888875 58899999999999999999999999999999999999
Q ss_pred cccccccCccccccc-cCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCC
Q 002094 176 NRLSGQLPYGIWFLR-SLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSL 254 (967)
Q Consensus 176 N~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 254 (967)
|++++.+|..+..++ +|++|+|++|.+++.+|..+..+. |++|+|++|++++..|..|+.+++|++|++++|++++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 999999999999988 899999999999988999998887 999999999999888889999999999999999998666
Q ss_pred ChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCc-CCC
Q 002094 255 PDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQ-FTG 324 (967)
Q Consensus 255 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~ 324 (967)
|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|. +.+
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp GG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred Cc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 55 788889999999999998888888888999999999999998888875 788888888888887 443
No 40
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.5e-43 Score=407.75 Aligned_cols=366 Identities=17% Similarity=0.154 Sum_probs=246.7
Q ss_pred CCCceEeccccccCCCCccccccccccceeeeccccccccc-CccccccccCCeEeecCCcCCCcccccccCCCCCCeee
Q 002094 142 GSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQL-PYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIK 220 (967)
Q Consensus 142 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 220 (967)
++|++|+|++|++++..|..|+++++|++|+|++|++.+.+ +..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 45555555555555555555555555556666555554333 34455556666666666665555555566666666666
Q ss_pred ccCccccccCCcC--ccCCCCccEEeccccccCCCCChh-hhcCCCCCEEEccCCCCCCcCchhhccc--cccccccccc
Q 002094 221 LGKNKFSGQLPED--IGGCSMLKVLDFGVNSLSGSLPDS-LQRLNSCSSLSLKGNSFTGEVPDWIGKL--ANLESLDLSL 295 (967)
Q Consensus 221 L~~n~l~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~~ 295 (967)
|++|++++..+.. |+.+++|++|++++|++++..|.. +.++++|++|+|++|.+++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 6666665533333 666666666666666666555554 5666666666666666666666666555 5666677777
Q ss_pred cccccccCCC--------CCcccccceEEcccCcCCCCCChhhhcC---CCCcEEEccCCcCcCCCChhhhcccccEEec
Q 002094 296 NQFSGRIPSS--------IGNLVFLKELNISMNQFTGGLPESMMNC---GNLLAIDVSQNKLTGNIPTWIFKMGLQTVSL 364 (967)
Q Consensus 296 N~l~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L 364 (967)
|.+.+..+.. +..+++|++|++++|++++..|..+... ++|+.|++++|.+.+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------- 256 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------- 256 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------
Confidence 7666443332 2345667777777777776666655543 566666666665543210
Q ss_pred cCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccc--cccchhcccccccccccCCCcCCcccccEEEec
Q 002094 365 SGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDL--SSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFS 442 (967)
Q Consensus 365 ~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 442 (967)
..+.+.+..+..+..+ ++|+.|++++|.+.+..|..+..+++|++|+|+
T Consensus 257 -----------------------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 307 (455)
T 3v47_A 257 -----------------------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLA 307 (455)
T ss_dssp -----------------------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECT
T ss_pred -----------------------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECC
Confidence 1112222222233332 567777788887777777788888888888888
Q ss_pred CCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCC
Q 002094 443 DNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGIL 522 (967)
Q Consensus 443 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 522 (967)
+|++++..|..|.++++|++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|.++++|++|+|++|++++..
T Consensus 308 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (455)
T 3v47_A 308 QNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387 (455)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCC
Confidence 88888777888888888888888888888777888888899999999999998888888999999999999999999877
Q ss_pred chhhhhccCCceEEecCCcccccCCCC
Q 002094 523 PKELINLSHLLSFNISHNHLHGELPVG 549 (967)
Q Consensus 523 p~~l~~l~~L~~L~l~~N~l~~~~p~~ 549 (967)
+..+..+++|+.|++++|+++|.+|..
T Consensus 388 ~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 388 DGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred HhHhccCCcccEEEccCCCcccCCCcc
Confidence 778888999999999999999988854
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.7e-43 Score=407.52 Aligned_cols=375 Identities=18% Similarity=0.162 Sum_probs=297.4
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
++|++|+|++|++++..|..|+.+++|++|+|++|.+.+.++...|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999999999999999999999999998888888889999999999999999988899999999999999
Q ss_pred ecccccccccCcc--ccccccCCeEeecCCcCCCccccc-ccCCCCCCeeeccCccccccCCcCccCC--CCccEEeccc
Q 002094 173 FSSNRLSGQLPYG--IWFLRSLQSLDLSNNLLEGEIVKG-ISNLYDLRAIKLGKNKFSGQLPEDIGGC--SMLKVLDFGV 247 (967)
Q Consensus 173 L~~N~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~ 247 (967)
|++|++++..|.. |..+++|++|+|++|.+++..|.. +.++++|++|+|++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755544 888999999999999998877766 7888888888888888888878777766 6778888888
Q ss_pred cccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcc---cccceEEcccCcCCC
Q 002094 248 NSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNL---VFLKELNISMNQFTG 324 (967)
Q Consensus 248 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~ 324 (967)
|.+.+..+..+.. .....+..+++|++|++++|++.+..|..+..+ ++|+.|++++|.+.+
T Consensus 190 n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 190 ITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp CBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred Ccccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 8777544332210 000112233445555555555544444333332 556666666665443
Q ss_pred CCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCC
Q 002094 325 GLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPS 404 (967)
Q Consensus 325 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~ 404 (967)
.. +..+.+.+..+..+.. -..++|++|++++|++++.+|.
T Consensus 254 ~~--------------~~~~~~~~~~~~~~~~--------------------------~~~~~L~~L~l~~n~l~~~~~~ 293 (455)
T 3v47_A 254 SS--------------FGHTNFKDPDNFTFKG--------------------------LEASGVKTCDLSKSKIFALLKS 293 (455)
T ss_dssp CC--------------TTCCSSCCCCTTTTGG--------------------------GTTSCCCEEECCSSCCCEECTT
T ss_pred cc--------------cchhhhccCccccccc--------------------------ccccCceEEEecCccccccchh
Confidence 21 1112222111111100 0135788999999999988999
Q ss_pred CcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCcc
Q 002094 405 NIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSL 484 (967)
Q Consensus 405 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 484 (967)
.+..+++|++|+|++|++.+..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|++++..|..|..+++|
T Consensus 294 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccc
Confidence 99999999999999999998889999999999999999999998889999999999999999999998889999999999
Q ss_pred ceeeccCCcCcCccchhhhcccCccEEeccCCccccCCc
Q 002094 485 TSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILP 523 (967)
Q Consensus 485 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 523 (967)
+.|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 374 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999998877888999999999999999998887
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-43 Score=391.09 Aligned_cols=262 Identities=19% Similarity=0.255 Sum_probs=202.8
Q ss_pred hhccCCCCccCCCCceEEEEEEeC----CCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCcee
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ----DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 755 (967)
.+.|+..+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++++.+ +|||||++++++.+++..+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 456899999999999999999853 46889999986543 356788999999988 6999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC-CCeEEeecccccccCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS-GEPKVGDFGLARLLPM 834 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~-~~~kl~Dfg~a~~~~~ 834 (967)
+||||+++|+|.+++.. +++.++..++.|++.||+|||++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus 97 lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 97 IAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp EEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred EEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 99999999999999842 8899999999999999999999999999999999999876 7999999999976543
Q ss_pred Cccc--------------------------cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCC
Q 002094 835 LDRC--------------------------ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYM 888 (967)
Q Consensus 835 ~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~ 888 (967)
.... .......||+.|+|||++.+...++.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 2110 11223569999999999866667899999999999999999999999765
Q ss_pred ccchHhHHHHHHhhhc---------------------cCCchhhcc---------h---------hhcCCCChhhHHHHH
Q 002094 889 EDDVVVLCDMVRGALE---------------------DGRVEDCVD---------A---------RLRGNFPADEAIPVI 929 (967)
Q Consensus 889 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~---------~---------~~~~~~~~~~~~~l~ 929 (967)
.++...+..+....-. ........+ + ....+.....+.++.
T Consensus 251 ~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~ 330 (361)
T 4f9c_A 251 SDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAY 330 (361)
T ss_dssp SSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHH
T ss_pred CCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHH
Confidence 5554444333321000 000000000 0 000011233456789
Q ss_pred HHHHhhccCCCCCCCCHHHHHH
Q 002094 930 KLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 930 ~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+|+.+|++.||++|||++|+++
T Consensus 331 DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 331 DLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHCcCChhHCcCHHHHhc
Confidence 9999999999999999999875
No 43
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=396.09 Aligned_cols=264 Identities=21% Similarity=0.277 Sum_probs=203.7
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEc------CCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWT------PSL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 753 (967)
+.|+..+.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|++++++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 34788899999999999999964 699999999976543 3345678899999999999999999998764 356
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.|+|||||+ |+|.+++..... +++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~---l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 799999996 689999976543 8999999999999999999999999999999999999999999999999998664
Q ss_pred CCc--cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh
Q 002094 834 MLD--RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC 911 (967)
Q Consensus 834 ~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (967)
... .........||+.|+|||++.+...++.++||||+||++|||++|++||...... ..+..++.. ...+.....
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~-~g~p~~~~~ 287 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMV-LGTPSPAVI 287 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHH-HCCCCGGGT
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHh-cCCCChHHh
Confidence 321 1223346789999999999866667899999999999999999999999754332 222222221 111111000
Q ss_pred cc----------hhh--cCCC-----ChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 912 VD----------ARL--RGNF-----PADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 912 ~~----------~~~--~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.. ..+ .... .+..+.++.+|+.+|+..||++|||++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 000 0000 1234567899999999999999999999876
No 44
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.7e-42 Score=378.46 Aligned_cols=278 Identities=33% Similarity=0.566 Sum_probs=236.4
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|+.++++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred hccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence 4578899999999999999998889999999887654 345678999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 762 SSGSLYKHLHDGSSR-NCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~-~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
++|+|.+++...... ..+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...........
T Consensus 118 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 999999999765432 2489999999999999999999999999999999999999999999999999986554333333
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCcc-chHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMED-DVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
.....||+.|+|||.+ ....++.++||||||+++|||++|+.||..... +......|.........+.+.+++.....
T Consensus 198 ~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYF-IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276 (321)
T ss_dssp BCCCEEETTTCCHHHH-HHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred ccccCCCccccCHHHh-cCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccc
Confidence 4456689999999988 556789999999999999999999999974322 22334455555555566666777777777
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
.+.+.+..+.+++.+|++.||++|||++|+++.|+.+.+..+
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 788899999999999999999999999999999998876544
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.6e-42 Score=394.72 Aligned_cols=384 Identities=25% Similarity=0.307 Sum_probs=157.6
Q ss_pred CeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCC-------------cEEEcCCCCCCCCCCc
Q 002094 69 KRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTL-------------QVVDFSENNLSGLIPD 135 (967)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~Ls~n~~~~~ip~ 135 (967)
.++..+++.++.+ |.+|.++++|++|++|++++|+++|.+|..++.+++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 3555666666666 6666666666666666666666666666666666554 555555555542 332
Q ss_pred hhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCC
Q 002094 136 EFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYD 215 (967)
Q Consensus 136 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 215 (967)
..++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|.+++ +| .|+++++
T Consensus 89 ----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 89 ----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp ----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred ----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 12445555555555554 3322 2445555555555542 1111 1345555555555543 22 3455555
Q ss_pred CCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccc
Q 002094 216 LRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSL 295 (967)
Q Consensus 216 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 295 (967)
|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|+.|++++|++++ +|.. .++|++|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcC
Confidence 5555555555443 23222 244445555554443 23 34444444444444444443 2211 12444444444
Q ss_pred cccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCC
Q 002094 296 NQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQY 375 (967)
Q Consensus 296 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~ 375 (967)
|+++ .+| .++.+++|++|++++|++++ +|.. .++|+.|++++|++++ +|..
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---------------------- 275 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---------------------- 275 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC----------------------
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc----------------------
Confidence 4444 333 24444444444444444442 2211 2344444444444442 2221
Q ss_pred CcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCc-ccccEEEecCCcccccCcccc
Q 002094 376 PSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKL-KAIQVLDFSDNWLNGTIPPQI 454 (967)
Q Consensus 376 ~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~ 454 (967)
.++|++|++++|++++. |.. .++|+.|++++|++.+ ++ .+ ++|+.|++++|++++ +|..
T Consensus 276 ---------~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~- 335 (454)
T 1jl5_A 276 ---------PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL- 335 (454)
T ss_dssp ---------CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC-
T ss_pred ---------cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc-
Confidence 24455555555555542 110 1345555555555543 11 12 355666666666653 3432
Q ss_pred cCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcC--ccchhhhcccCccEEeccCCccccCCchhhhhccCC
Q 002094 455 GGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTG--PVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHL 532 (967)
Q Consensus 455 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 532 (967)
+++|++|++++|+++ .+|. .+++|+.|+|++|++++ .+|.++..+ +.|.+.+.+|.. +++|
T Consensus 336 --~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L 398 (454)
T 1jl5_A 336 --PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNL 398 (454)
T ss_dssp --CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---------------
T ss_pred --CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcC
Confidence 345666666666665 3443 34556666666666665 444444332 223444444432 2455
Q ss_pred ceEEecCCcccc
Q 002094 533 LSFNISHNHLHG 544 (967)
Q Consensus 533 ~~L~l~~N~l~~ 544 (967)
+.|++++|++++
T Consensus 399 ~~L~ls~N~l~~ 410 (454)
T 1jl5_A 399 KQLHVETNPLRE 410 (454)
T ss_dssp ------------
T ss_pred CEEECCCCcCCc
Confidence 566666666655
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.4e-42 Score=399.60 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=202.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHH---HHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDF---EKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|+.+ +|+.||||++..... ......+ ..++.+++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 34688899999999999999965 689999999975432 1222333 34467788899999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+|||||+||+|.+++..... +++..+..++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 269 lVmEy~~GGdL~~~l~~~~~---l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 99999999999999986543 899999999999999999999999999999999999999999999999999876432
Q ss_pred ccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 836 DRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
......||+.|+|||++..+..++.++|+||+||++|||++|++||........ .++.+....
T Consensus 346 ----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i~~----------- 408 (689)
T 3v5w_A 346 ----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT----------- 408 (689)
T ss_dssp ----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHHHH-----------
T ss_pred ----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhhcC-----------
Confidence 223567999999999985556799999999999999999999999974322111 111111111
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPD-----MEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 951 (967)
....+|...+.++.++|.+|++.||++|++ ++|+++
T Consensus 409 ~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 409 MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 122356667788999999999999999998 577653
No 47
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.3e-42 Score=377.51 Aligned_cols=275 Identities=39% Similarity=0.695 Sum_probs=236.4
Q ss_pred HhhccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 680 ANALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
..+.|+..+.||+|+||.||+|..++++.||||++...........+.+|++++++++||||+++++++..++..++|||
T Consensus 28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 107 (326)
T 3uim_A 28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107 (326)
T ss_dssp TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence 34567999999999999999999888999999999766543344479999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 760 FISSGSLYKHLHDGSSR-NCLSWRQRFNIILGMAKGLAYLHHT---NIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~-~~~~~~~~~~i~~~i~~aL~~LH~~---~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
|+++|+|.+++...... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 108 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred eccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 99999999999875432 3589999999999999999999999 9999999999999999999999999999876532
Q ss_pred ccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCC---CccchHhHHHHHHhhhccCCchhhc
Q 002094 836 DRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEY---MEDDVVVLCDMVRGALEDGRVEDCV 912 (967)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (967)
. ........||+.|+|||.+ ....++.++||||+|+++|||++|+.||+. .........+|+.............
T Consensus 188 ~-~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (326)
T 3uim_A 188 D-THVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV 265 (326)
T ss_dssp S-SCEECCCCSCGGGCCHHHH-HHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSS
T ss_pred c-ccccccccCCcCccCHHHh-ccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhc
Confidence 2 2233456689999999988 556789999999999999999999999962 2333445677888888888888888
Q ss_pred chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhh
Q 002094 913 DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELI 956 (967)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~ 956 (967)
+......++...+..+.+++.+|++.||++|||++|+++.|++.
T Consensus 266 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 266 DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp CTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred ChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 88888888899999999999999999999999999999999863
No 48
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-40 Score=403.98 Aligned_cols=471 Identities=22% Similarity=0.208 Sum_probs=385.5
Q ss_pred eeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEec
Q 002094 70 RVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSF 149 (967)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L 149 (967)
+.+.|+|.+|.+++..+.+|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++ +|...|+++++|++|+|
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~-l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNV 155 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC-STTCCCTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC-CChhhhhcCcccCeecc
Confidence 67889999999999888889999999999999999999888899999999999999999994 66666899999999999
Q ss_pred cccccCC-CCccccccccccceeeecccccccccCccccccccCC----eEeecCCcCCCcccccccCCCCCCeeeccCc
Q 002094 150 ANNNLTG-PIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQ----SLDLSNNLLEGEIVKGISNLYDLRAIKLGKN 224 (967)
Q Consensus 150 ~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 224 (967)
++|++++ ..|..++.+++|++|+|++|+|++..+..+..+.+++ .++++.|.++...+..+.. ..+..+++.+|
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n 234 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNN 234 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhcc
Confidence 9999986 4678899999999999999999998888888877655 6889999998665555544 35677777777
Q ss_pred ccccc-CCcCccCCCCccEEec------------------------------cccccCC---CCChhhhcCCCCCEEEcc
Q 002094 225 KFSGQ-LPEDIGGCSMLKVLDF------------------------------GVNSLSG---SLPDSLQRLNSCSSLSLK 270 (967)
Q Consensus 225 ~l~~~-~~~~~~~l~~L~~L~l------------------------------~~n~l~~---~~~~~l~~l~~L~~L~L~ 270 (967)
..+.. .+..+.+++.++...+ ..+.... ..+..+..+.+++.+.+.
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence 54421 1223334444443333 2222211 123445667889999999
Q ss_pred CCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcC--
Q 002094 271 GNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTG-- 348 (967)
Q Consensus 271 ~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-- 348 (967)
+|.+.... .+....+|+.|++.+|.+.+..+ ..+..|+.+++.+|.+... .....+++|+.|++++|.+..
T Consensus 315 ~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 315 SVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp SCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEE
T ss_pred cccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhcccccccc
Confidence 99887543 35667899999999999985533 3567899999999988743 345678999999999999863
Q ss_pred CCChhhhc-ccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCC-CCcccccccchhccccccccccc
Q 002094 349 NIPTWIFK-MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIP-SNIGDLSSLMLLNMSMNYLFGSI 426 (967)
Q Consensus 349 ~~p~~~~~-~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~ 426 (967)
..+..... .+++.+++..|.+... ...+..+++|+.++++.|+.....+ ..+..+++++.+++++|.+.+..
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~~~------~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~ 461 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVITM------SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 461 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEEEE------CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECC
T ss_pred ccccchhhhhhhhhhhccccccccc------cccccccccccchhhhhcccccccccccccccccccccccccccccccc
Confidence 33444433 4899999999887442 2234567899999999988876554 56889999999999999999999
Q ss_pred CCCcCCcccccEEEecCCcc-cccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcc
Q 002094 427 PASIGKLKAIQVLDFSDNWL-NGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANL 505 (967)
Q Consensus 427 p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 505 (967)
+..+..++.|+.|+|++|++ .+..|..|..+++|++|+|++|+|++..|..|+++++|+.|+|++|+|++..|..|.++
T Consensus 462 ~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 541 (635)
T 4g8a_A 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 541 (635)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC
T ss_pred ccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC
Confidence 99999999999999999985 45678899999999999999999999999999999999999999999999999999999
Q ss_pred cCccEEeccCCccccCCchhhhhc-cCCceEEecCCcccccCCCCCCCCcc
Q 002094 506 SNLKYVDLSFNDLSGILPKELINL-SHLLSFNISHNHLHGELPVGGFFNTI 555 (967)
Q Consensus 506 ~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~p~~~~~~~~ 555 (967)
++|++|||++|+|++..|..|..+ ++|+.|+|++|+|+|.+...++.+++
T Consensus 542 ~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl 592 (635)
T 4g8a_A 542 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 592 (635)
T ss_dssp TTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred CCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHH
Confidence 999999999999999999999998 68999999999999988765554444
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.1e-41 Score=387.79 Aligned_cols=384 Identities=27% Similarity=0.298 Sum_probs=263.6
Q ss_pred CCeeeeeeecCCCCCccccccccCCCCC-------------CeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCC
Q 002094 68 TKRVVGLTLDGFSLSGHIGRGLLRLQFL-------------QVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIP 134 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L-------------~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip 134 (967)
-.+.+.|++.++.++|.+|.+++++++| ++|++++|++++. |. -.++|++|++++|.+++ +|
T Consensus 33 L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~---~~~~L~~L~l~~n~l~~-lp 107 (454)
T 1jl5_A 33 VKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE---LPPHLESLVASCNSLTE-LP 107 (454)
T ss_dssp -CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS---CCTTCSEEECCSSCCSS-CC
T ss_pred ccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC---CcCCCCEEEccCCcCCc-cc
Confidence 3567788999999999999999999875 9999999999974 33 24799999999999997 77
Q ss_pred chhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCC
Q 002094 135 DEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLY 214 (967)
Q Consensus 135 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 214 (967)
.. +++|++|++++|++++. |.. .++|++|+|++|++++ +| .|+.+++|++|++++|++++ +|..+ .
T Consensus 108 ~~----~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~ 173 (454)
T 1jl5_A 108 EL----PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---P 173 (454)
T ss_dssp CC----CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---T
T ss_pred cc----cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---c
Confidence 53 48999999999999963 321 2799999999999996 77 59999999999999999996 44433 5
Q ss_pred CCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccc
Q 002094 215 DLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLS 294 (967)
Q Consensus 215 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 294 (967)
+|++|++++|++++ +| .++++++|++|++++|++++ +|... ++|++|++++|.++ .+|. ++.+++|++|+++
T Consensus 174 ~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~ 245 (454)
T 1jl5_A 174 SLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYAD 245 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECC
T ss_pred cccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECC
Confidence 89999999999997 55 69999999999999999996 44432 58999999999999 5664 8999999999999
Q ss_pred ccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCC
Q 002094 295 LNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQ 374 (967)
Q Consensus 295 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~ 374 (967)
+|++++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++ +|..
T Consensus 246 ~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~--------------------- 295 (454)
T 1jl5_A 246 NNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL--------------------- 295 (454)
T ss_dssp SSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---------------------
T ss_pred CCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---------------------
Confidence 999985 5543 4789999999999996 4543 4789999999999985 2210
Q ss_pred CCcccccccCCCCccEEEccCCcccCCCCCCcccc-cccchhcccccccccccCCCcCCcccccEEEecCCcccccCccc
Q 002094 375 YPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDL-SSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQ 453 (967)
Q Consensus 375 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 453 (967)
.++|++|++++|++++. + .+ ++|++|++++|++.+ +|.. +++|+.|++++|+++ .+|.
T Consensus 296 ----------~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~- 354 (454)
T 1jl5_A 296 ----------PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE- 354 (454)
T ss_dssp ----------CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC-
T ss_pred ----------CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc-
Confidence 13455555555555531 1 12 356666666666664 4443 467788888888887 4555
Q ss_pred ccCCCCCCEEEcCCCCCCC--cCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCcccc--CCchhhhhc
Q 002094 454 IGGAVSLKELKLEKNFLSG--RIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSG--ILPKELINL 529 (967)
Q Consensus 454 ~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l 529 (967)
.+++|++|+|++|++++ .+|..++. |+.|++.+.+|.. +++|++||+++|++++ .+|.+
T Consensus 355 --~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s---- 417 (454)
T 1jl5_A 355 --LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES---- 417 (454)
T ss_dssp --CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------------------
T ss_pred --hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchhh----
Confidence 36788888888888887 56665553 3457777777764 5788999999999987 56644
Q ss_pred cCCceEEecCCcccccCCC
Q 002094 530 SHLLSFNISHNHLHGELPV 548 (967)
Q Consensus 530 ~~L~~L~l~~N~l~~~~p~ 548 (967)
++.|.+.+|.+.+.+|.
T Consensus 418 --l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 418 --VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp -------------------
T ss_pred --HhheeCcCcccCCcccc
Confidence 55667888888887664
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.3e-41 Score=378.16 Aligned_cols=262 Identities=27% Similarity=0.389 Sum_probs=217.7
Q ss_pred hccCCCCccCCCCceEEEEEEeC--------CCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCC
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ--------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPS 752 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 752 (967)
+.|+..+.||+|+||.||+|+.. ++..||||++.........+.+.+|+++++++ +||||+++++++.+++
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 44678889999999999999852 45679999998765455567899999999999 8999999999999999
Q ss_pred ceeEEEEecCCCchhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSS-------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG 819 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~ 819 (967)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 240 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCC
Confidence 99999999999999999986542 12478999999999999999999999999999999999999999
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 898 (967)
.+||+|||+++...............+++.|+|||++ ....++.++|||||||++|||++ |+.||........ ...
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~--~~~ 317 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--FKL 317 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH-HTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHH
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--HHH
Confidence 9999999999876543333333455678899999988 55679999999999999999999 9999975443211 111
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
+ ....+...+..++.++.+++.+|++.||++|||+.|+++.|+++...
T Consensus 318 ~-------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 318 L-------------KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp H-------------HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H-------------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1 11223345566778899999999999999999999999999998643
No 51
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.3e-41 Score=397.54 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=206.8
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|+++++.++|||||++++++.+++..++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 45788899999999999999965 69999999997654 34467799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC--CCeEEeecccccccCCCccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS--GEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~--~~~kl~Dfg~a~~~~~~~~~ 838 (967)
|+||+|.+++..... .+++.++..++.||+.||+|||+++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311 (573)
T ss_dssp CCCCBHHHHHTCTTS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred cCCCcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence 999999999975432 38999999999999999999999999999999999999854 899999999998775422
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
......||+.|+|||++ .+..++.++||||+||++|||++|++||...... ..+..+..... ....
T Consensus 312 -~~~~~~GT~~y~APEv~-~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~~~i~~~~~-----------~~~~ 377 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVA-EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLRNVKSCDW-----------NMDD 377 (573)
T ss_dssp -EEEEECSSGGGCCHHHH-TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCC-----------CCCS
T ss_pred -ceeeeEECccccCHHHh-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHhCCC-----------CCCc
Confidence 23346799999999998 6668999999999999999999999999754432 22221111100 0111
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+...+.++.+||.+|++.||++|||++|+++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112345667899999999999999999999876
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.6e-41 Score=367.54 Aligned_cols=265 Identities=32% Similarity=0.480 Sum_probs=207.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|+. +|+.||||++..... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred hHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence 4567888999999999999987 489999999976543 23456799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN--IIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
+++|+|.+++........+++..++.++.|++.||+|||++| |+||||||+||+++.++.+||+|||+++.... ..
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~--~~ 193 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TF 193 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc--cc
Confidence 999999999987543334889999999999999999999999 99999999999999999999999999975432 12
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||.+ ....++.++||||+|+++|||++|+.||......... ..+. ....+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~--~~~~------------~~~~~~ 258 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVL-RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV--AAVG------------FKCKRL 258 (309)
T ss_dssp --------CCTTSCHHHH-TTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--HHHH------------HSCCCC
T ss_pred cccccCCCCccccChhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHH------------hcCCCC
Confidence 223456789999999998 5667899999999999999999999999755432111 1110 011123
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
..+...+.++.+++.+|++.||++|||++|+++.|+.+.+...+..
T Consensus 259 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~ 304 (309)
T 3p86_A 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304 (309)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC------
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCC
Confidence 4456677789999999999999999999999999999987765543
No 53
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.7e-40 Score=379.19 Aligned_cols=364 Identities=19% Similarity=0.178 Sum_probs=263.2
Q ss_pred CCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcc
Q 002094 81 LSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPE 160 (967)
Q Consensus 81 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~ 160 (967)
..+..+..++++++|++|+|++|++++. | .++.+++|++|+|++|++++ +| ++.+++|++|+|++|++++. +
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e-
Confidence 3344455677888888888888888875 4 68888888888888888885 44 57788888888888888864 3
Q ss_pred ccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCc
Q 002094 161 SLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSML 240 (967)
Q Consensus 161 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 240 (967)
++.+++|++|+|++|++++. | ++.+++|++|++++|.+++. .++++++|++|++++|+..+.+ .++.+++|
T Consensus 102 -~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred -cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 77888888888888888753 3 77788888888888888764 2677777777777777554444 46677777
Q ss_pred cEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccC
Q 002094 241 KVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 241 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 777777777775 33 66667777777777777654 25666666677777776665 34 566666666666666
Q ss_pred cCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccC
Q 002094 321 QFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSG 400 (967)
Q Consensus 321 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~ 400 (967)
++++.. +..+++|+.|++++|+ |+.|++++|.+.+
T Consensus 244 ~l~~~~---~~~l~~L~~L~l~~n~------------------------------------------L~~L~l~~n~~~~ 278 (457)
T 3bz5_A 244 PLTELD---VSTLSKLTTLHCIQTD------------------------------------------LLEIDLTHNTQLI 278 (457)
T ss_dssp CCSCCC---CTTCTTCCEEECTTCC------------------------------------------CSCCCCTTCTTCC
T ss_pred cCCCcC---HHHCCCCCEEeccCCC------------------------------------------CCEEECCCCccCC
Confidence 666543 3345555666555443 3445666666666
Q ss_pred CCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccc
Q 002094 401 VIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKN 480 (967)
Q Consensus 401 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 480 (967)
.+| ++.+++|+.|++++|.+.+.+|. ...+|+.|++++| ++|++|+|++|++++. + +++
T Consensus 279 ~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~ 337 (457)
T 3bz5_A 279 YFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSH 337 (457)
T ss_dssp EEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTT
T ss_pred ccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--ccc
Confidence 665 45678888888888887777764 3345566666555 5789999999999874 3 888
Q ss_pred cCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCC
Q 002094 481 CSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG 549 (967)
Q Consensus 481 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 549 (967)
+++|+.|++++|+|++ ++.|..|++++|.++|. ..+..|..+++++|+++|.||..
T Consensus 338 l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 338 NTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 9999999999999986 35677788999999876 35677888999999999999864
No 54
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=367.58 Aligned_cols=263 Identities=27% Similarity=0.408 Sum_probs=214.9
Q ss_pred hccCCCCccCCCCceEEEEEEeC----CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ----DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|... .+..||||++.........+.+.+|++++++++||||+++++++.+++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 34677889999999999999974 35569999998765455667899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.++++.... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 129 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999999976433 389999999999999999999999999999999999999999999999999987654221
Q ss_pred -ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 838 -CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 838 -~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
........+|+.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ... +...
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-----~~~----------~~~~ 270 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----ISS----------VEEG 270 (325)
T ss_dssp CCEECC---CCGGGSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-----HHH----------HHTT
T ss_pred ceeeccCCCCcccccCHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHH----------HHcC
Confidence 1122334467789999998 55678999999999999999999 9999975543211 111 1111
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
.+...+...+..+.+++.+|++.||++|||++|++++|+.+.+..++
T Consensus 271 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 23334566778899999999999999999999999999999866554
No 55
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.9e-41 Score=380.12 Aligned_cols=259 Identities=24% Similarity=0.341 Sum_probs=214.8
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|...+.||+|+||.||+|..+ +++.||||.+.........+++.+|++++++++||||+++++++..++..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 34677889999999999999976 78999999997654334456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++|+|.++++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..........
T Consensus 194 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999999975432 388999999999999999999999999999999999999999999999999986543222222
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
.....+++.|+|||.+ ....++.++||||||+++|||++ |+.||........ .+. +....+..
T Consensus 272 ~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--~~~-------------~~~~~~~~ 335 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEAL-NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--REF-------------VEKGGRLP 335 (377)
T ss_dssp SSCCEEEGGGSCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--HHH-------------HHTTCCCC
T ss_pred CCCCCCCcCcCCHhHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH-------------HHcCCCCC
Confidence 2234467789999988 55678999999999999999998 9999976543211 111 11222334
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.+..++.++.+++.+||+.||++|||++++++.|+++.+
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 566677889999999999999999999999999999865
No 56
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.1e-40 Score=355.43 Aligned_cols=256 Identities=28% Similarity=0.413 Sum_probs=214.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 3467788999999999999999889999999998654 34578999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... .....
T Consensus 88 ~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHST
T ss_pred CCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccc-ccccc
Confidence 99999999976443 3899999999999999999999999999999999999999999999999999866432 22233
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ .... ........
T Consensus 165 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~-----~~~~----------~~~~~~~~ 228 (269)
T 4hcu_A 165 TGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDI----------STGFRLYK 228 (269)
T ss_dssp TSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHH----------HTTCCCCC
T ss_pred cCcccccccCCHHHh-cCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH-----HHHH----------hcCccCCC
Confidence 455667889999998 56678999999999999999999 9999975443211 1111 11112233
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+...+..+.+++.+|++.||++|||++|+++.|+++.+
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 45566779999999999999999999999999998864
No 57
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=361.46 Aligned_cols=263 Identities=26% Similarity=0.385 Sum_probs=213.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 34677889999999999999965 58999999886543 45567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc-
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI- 839 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~- 839 (967)
+++|+|.+++..... .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 89 IKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999987433 38999999999999999999999999999999999999999999999999998764322111
Q ss_pred -----------ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc
Q 002094 840 -----------LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV 908 (967)
Q Consensus 840 -----------~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (967)
......||+.|+|||.+ ....++.++||||||+++|||++|..||..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~------------- 232 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF------------- 232 (310)
T ss_dssp -------------CCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------------
T ss_pred ccccccccccccccccCCCcceeCHHHh-cCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------------
Confidence 11145689999999998 66788999999999999999999999987433221100
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
............+..++..+.+++.+|++.||++|||++|+++.|++++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 233 GLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp SBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00011111222345566679999999999999999999999999999876543
No 58
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.4e-39 Score=356.35 Aligned_cols=281 Identities=31% Similarity=0.545 Sum_probs=224.3
Q ss_pred CcHHHHHHHhhccCCC------CccCCCCceEEEEEEeCCCcEEEEEEeecCCc---cccHHHHHHHHHHHcCCCCCcee
Q 002094 672 GDAEFAAGANALLNKD------CELGRGGFGVVYRTILQDGRSVAIKKLTVSGL---IKSQEDFEKEMKTLGKIRHHNLV 742 (967)
Q Consensus 672 ~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~h~niv 742 (967)
...++...+.++ ... +.||+|+||.||+|.. +++.||||++..... ....+.+.+|++++++++||||+
T Consensus 16 ~~~~l~~~~~~f-~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 93 (307)
T 2nru_A 16 SFYELKNVTNNF-DERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93 (307)
T ss_dssp CHHHHHHHTTTT-CCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBC
T ss_pred cHHHHHHHHccc-ccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeE
Confidence 345566655543 444 8899999999999987 589999999875432 23467899999999999999999
Q ss_pred eeeeEEEcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeE
Q 002094 743 ALEGYYWTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPK 822 (967)
Q Consensus 743 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~k 822 (967)
++++++.+.+..++||||+++++|.+++........+++..++.++.|++.||+|||++||+||||||+||+++.++.+|
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~k 173 (307)
T 2nru_A 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 173 (307)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEE
T ss_pred EEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEE
Confidence 99999999999999999999999999997654444589999999999999999999999999999999999999999999
Q ss_pred EeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhh
Q 002094 823 VGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGA 902 (967)
Q Consensus 823 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 902 (967)
|+|||++................|++.|+|||.+ . +.++.++||||+|+++|+|++|+.||....... ....+....
T Consensus 174 l~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~-~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~ 250 (307)
T 2nru_A 174 ISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-R-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEI 250 (307)
T ss_dssp ECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHH-T-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHH
T ss_pred EeecccccccccccccccccccCCCcCcCChHHh-c-CCCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHh
Confidence 9999999876543333334456789999999987 3 358899999999999999999999997543321 112222221
Q ss_pred hc-cCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 903 LE-DGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 903 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.. ...+.+.++..+ ...+...+..+.+++.+|++.||++|||++++++.|+++..
T Consensus 251 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 251 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11 122333333333 23466778889999999999999999999999999998864
No 59
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.1e-40 Score=371.78 Aligned_cols=260 Identities=30% Similarity=0.438 Sum_probs=204.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC----CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ----DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ ++..||||+++........+++.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 35788999999999999999864 57789999998765445567899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.++++.... .+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999999986533 389999999999999999999999999999999999999999999999999987643221
Q ss_pred c-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 838 C-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 838 ~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
. .......+++.|+|||.+ ....++.++||||||+++|||++ |+.||....... .... +...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~-------------i~~~ 266 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKA-------------VDEG 266 (373)
T ss_dssp -----------CTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHH-------------HHTT
T ss_pred cceeccCCCcCCCccChhhh-ccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH-------------HHcC
Confidence 1 111223356789999998 56678999999999999999998 999997544321 1111 1222
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.+...+..++..+.+++.+|++.||++|||+.|++++|+++.+.
T Consensus 267 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 23344556778899999999999999999999999999998654
No 60
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.9e-40 Score=381.31 Aligned_cols=262 Identities=26% Similarity=0.412 Sum_probs=217.7
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|..+++..||||+++... ...+.+.+|++++++++|||||++++++. .+..++||||+
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 3467788999999999999999889999999997654 45788999999999999999999999986 56789999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++|+|.++++..... .+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 265 ~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~-~~~~~ 342 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-EYTAR 342 (454)
T ss_dssp TTCBHHHHHHSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH-HHHTT
T ss_pred CCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC-ceecc
Confidence 999999999754321 2788999999999999999999999999999999999999999999999999876432 12223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||||+++|||++ |+.||........ . ..+ ....+...
T Consensus 343 ~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~-~-~~i-------------~~~~~~~~ 406 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAI-NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-I-RAL-------------ERGYRMPR 406 (454)
T ss_dssp CSSSSCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-H-HHH-------------HHTCCCCC
T ss_pred CCCcccccccCHHHh-ccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH-H-HHH-------------HcCCCCCC
Confidence 344567889999998 55679999999999999999999 9999976543211 1 111 11223344
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
+..++.++.+++.+||+.||++|||+++++++|+++....+++-
T Consensus 407 ~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~ 450 (454)
T 1qcf_A 407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQY 450 (454)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCSS
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccccc
Confidence 56677889999999999999999999999999999987766553
No 61
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4e-40 Score=353.08 Aligned_cols=258 Identities=26% Similarity=0.388 Sum_probs=214.2
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|..+++..||||++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 4467888999999999999999988899999997654 34577999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.++|+|||.+....... ....
T Consensus 86 ~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEEC
T ss_pred CCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhcc
Confidence 99999999976432 38899999999999999999999999999999999999999999999999998765422 2233
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ .... ........
T Consensus 163 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~----------~~~~~~~~ 226 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVF-HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-----VLKV----------SQGHRLYR 226 (268)
T ss_dssp CSCCCCGGGCCHHHH-HHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHHH----------HTTCCCCC
T ss_pred cCCCcCcccCCHHHH-hccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-----HHHH----------HcCCCCCC
Confidence 445567789999988 56678999999999999999999 9999975443211 1111 11112223
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
+...+..+.+++.+|++.||++|||++|+++.|+.+++..
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 4445677999999999999999999999999999998653
No 62
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=364.61 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=199.6
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|+. .+|+.||||++...........+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 4578889999999999999995 478999999997765444456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++....... ...
T Consensus 90 ~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-~~~ 165 (347)
T 3zgw_A 90 CPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYH 165 (347)
T ss_dssp CTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-Ccc
Confidence 999999999976543 8999999999999999999999999999999999999999999999999987654321 222
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
.....||+.|+|||.+......+.++||||+||++|||++|+.||...... .....+..+ ....
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~~~i~~~---------------~~~~ 229 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKIMRG---------------KYDV 229 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT---------------CCCC
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcC---------------CCCC
Confidence 345678999999999854444589999999999999999999999754322 111111111 1223
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
+...+.++.+++.+|++.||++|||++|+++.
T Consensus 230 p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 45566778999999999999999999999864
No 63
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-39 Score=354.93 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=207.9
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4578899999999999999995 568999999997654 34467799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++|+|.+++... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++....... ..
T Consensus 99 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SK 172 (297)
T ss_dssp CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--CC
T ss_pred CCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--cc
Confidence 9999999999764 27899999999999999999999999999999999999999999999999998664322 22
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
.....||+.|+|||.+ ....++.++||||+|+++|||++|+.||........ ........ ......
T Consensus 173 ~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~------------~~~~~~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVV-TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNG------------TPELQN 238 (297)
T ss_dssp BCCCCSCGGGCCHHHH-HCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHC------------SCCCSC
T ss_pred cCCccCCcCccChhhh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCC------------CCCCCC
Confidence 3456789999999998 556789999999999999999999999975443221 11111110 011223
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+...+..+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 4556677999999999999999999999876
No 64
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=366.74 Aligned_cols=266 Identities=25% Similarity=0.395 Sum_probs=215.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.+.+..+
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 126 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence 45688889999999999999964 348899999987654455678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEE
Q 002094 756 LIYEFISSGSLYKHLHDGSS---------------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVL 814 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nil 814 (967)
+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++||+||||||+||+
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 206 (343)
T 1luf_A 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL 206 (343)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEE
Confidence 99999999999999976431 134899999999999999999999999999999999999
Q ss_pred eCCCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchH
Q 002094 815 IDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVV 893 (967)
Q Consensus 815 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~ 893 (967)
++.++.+||+|||++................+++.|+|||.+ ....++.++||||||+++|||++ |+.||........
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 285 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI-FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh-ccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH
Confidence 999999999999999866443332334456678899999988 55678999999999999999999 9999975443211
Q ss_pred hHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 894 VLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
.. .+..+ .....+...+.++.+++.+|++.||++|||+.++++.|+++.+...+.
T Consensus 286 -----~~-~~~~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 286 -----IY-YVRDG---------NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp -----HH-HHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred -----HH-HHhCC---------CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 11 11111 112345566778999999999999999999999999999998877654
No 65
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=370.85 Aligned_cols=265 Identities=28% Similarity=0.368 Sum_probs=219.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC--------CCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCC
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ--------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPS 752 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 752 (967)
+.|...+.||+|+||.||+|+.. .+..||||++..........++.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 45678889999999999999852 34679999998765555667899999999999 8999999999999999
Q ss_pred ceeEEEEecCCCchhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSS-------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG 819 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~ 819 (967)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 228 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 228 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCC
Confidence 99999999999999999986542 12489999999999999999999999999999999999999999
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 898 (967)
.+||+|||+++...............+|+.|+|||.+ ....++.++||||||+++|||++ |+.||....... ..+.
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--~~~~ 305 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFKL 305 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH-HSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHh-cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence 9999999999876543333344456678899999988 56678999999999999999999 999997544321 1111
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
+ ....+...+...+.++.+++.+|++.||++|||++|+++.|+++......
T Consensus 306 ~-------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 306 L-------------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp H-------------HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred H-------------HcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 1 11122334556677899999999999999999999999999998754433
No 66
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.2e-40 Score=371.39 Aligned_cols=264 Identities=28% Similarity=0.359 Sum_probs=216.7
Q ss_pred hhccCCCCccCCCCceEEEEEEe------CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCc
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL------QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSL 753 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 753 (967)
.+.|+..+.||+|+||.||+|++ .+++.||||++.........+.+.+|+++++++ +||||+++++++.+++.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 45578889999999999999973 246899999998765445567899999999999 79999999999987654
Q ss_pred -eeEEEEecCCCchhhhhhcCCC---------------------------------------------------------
Q 002094 754 -QLLIYEFISSGSLYKHLHDGSS--------------------------------------------------------- 775 (967)
Q Consensus 754 -~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 775 (967)
.++||||+++|+|.++++....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 8999999999999999986543
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccccccccccc
Q 002094 776 ------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALG 849 (967)
Q Consensus 776 ------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~ 849 (967)
...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++................||+.
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 11288999999999999999999999999999999999999999999999999987654444444556778899
Q ss_pred ccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHH
Q 002094 850 YMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPV 928 (967)
Q Consensus 850 y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 928 (967)
|+|||++ ....++.++||||||+++|||++ |+.||............ + ........+...+.++
T Consensus 261 y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~l 325 (359)
T 3vhe_A 261 WMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-L-------------KEGTRMRAPDYTTPEM 325 (359)
T ss_dssp GCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-H-------------HHTCCCCCCTTCCHHH
T ss_pred eEChhhh-cCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH-H-------------HcCCCCCCCCCCCHHH
Confidence 9999988 56678999999999999999998 99999765443222111 1 1112233455567789
Q ss_pred HHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 929 IKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 929 ~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.+++.+|++.||++|||++|+++.|+++.++
T Consensus 326 ~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 326 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988753
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-39 Score=354.28 Aligned_cols=265 Identities=27% Similarity=0.434 Sum_probs=208.1
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|...+.||+|+||.||+|... ..+|+|+++.... ....+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 34677889999999999999864 4689998876443 334578999999999999999999999875 5568999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++++|.+++..... .+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++...........
T Consensus 113 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 113 CEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp CSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred CCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 999999999975433 389999999999999999999999999999999999999999999999999986543333333
Q ss_pred cccccccccccCccccc--CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 841 SSKIQSALGYMAPEFAC--RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~--~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.....||+.|+|||.+. ....++.++||||||+++|||++|+.||........... .+........ ..
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~~~~~~~~~~---------~~ 260 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF-MVGRGYASPD---------LS 260 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH-HHHHTCCCCC---------ST
T ss_pred ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHH-HHhcCCCCcc---------hh
Confidence 44567899999999873 255688899999999999999999999986554332221 1111111110 11
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
.....++..+.+++.+|++.||++|||+.|+++.|+.+...+.
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 2334566789999999999999999999999999999987764
No 68
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.9e-40 Score=360.92 Aligned_cols=267 Identities=24% Similarity=0.280 Sum_probs=208.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc----eeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL----QLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~lv 757 (967)
+.|+..+.||+|+||.||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++..... .++|
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 34688889999999999999886 8999999997543 344566779999999999999999999987543 6999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT----------NIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~----------~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
|||+++|+|.++++... +++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 101 ~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 99999999999997642 89999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCccccccccccccccccCcccccCc----ccCCcccchhhHHHHHHHHHcCCCCCCCCccchH-hHHHHHHhh
Q 002094 828 LARLLPMLDRCILSSKIQSALGYMAPEFACRT----VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVV-VLCDMVRGA 902 (967)
Q Consensus 828 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~-~~~~~~~~~ 902 (967)
+++...............||+.|+|||.+... ..++.++||||||+++|||++|+.||....+... ..... .
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~---~ 253 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE---I 253 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH---H
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh---h
Confidence 99876543333334456789999999988432 4567789999999999999999999975332111 00000 0
Q ss_pred hccCCchhhcc----hhhcCCC-----ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 903 LEDGRVEDCVD----ARLRGNF-----PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 903 ~~~~~~~~~~~----~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.......+..+ ...+... ....+.++.+++.+|++.||++|||++|+++.|+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00111111111 1111111 22456679999999999999999999999999999864
No 69
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.5e-40 Score=359.84 Aligned_cols=248 Identities=23% Similarity=0.290 Sum_probs=206.6
Q ss_pred ccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 683 LLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
.|+..+.||+|+||.||+|.. .+|+.||||++..... ....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 468889999999999999996 5799999999976542 33456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ..
T Consensus 96 ~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~ 169 (328)
T 3fe3_A 96 ASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GK 169 (328)
T ss_dssp CTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS---CG
T ss_pred CCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC---Cc
Confidence 999999999976543 889999999999999999999999999999999999999999999999999766432 22
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
.....||+.|+|||.+......+.++||||+||++|||++|+.||+...... ....+..+ ....
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~---------------~~~~ 233 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-LRERVLRG---------------KYRI 233 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC---------------CCCC
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhC---------------CCCC
Confidence 3456799999999998544444689999999999999999999997543221 11111110 1123
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
|...+.++.+++.+|++.||.+|||++|+++.
T Consensus 234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 45566779999999999999999999998763
No 70
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-39 Score=352.49 Aligned_cols=256 Identities=25% Similarity=0.360 Sum_probs=211.0
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||++..+++..||||++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 3467788999999999999999988999999998654 34577999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... .....
T Consensus 102 ~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~ 178 (283)
T 3gen_A 102 ANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSS 178 (283)
T ss_dssp TTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH-HHHST
T ss_pred CCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccc-ccccc
Confidence 99999999976432 2899999999999999999999999999999999999999999999999999866432 22223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ... + ....+...
T Consensus 179 ~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-~~~-~-------------~~~~~~~~ 242 (283)
T 3gen_A 179 VGSKFPVRWSPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-AEH-I-------------AQGLRLYR 242 (283)
T ss_dssp TSTTSCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH-H-------------HTTCCCCC
T ss_pred cCCccCcccCCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-HHH-H-------------hcccCCCC
Confidence 345567889999998 55678999999999999999998 9999975543211 111 1 11122233
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+...+..+.+++.+|++.||++|||++|+++.|+++.+
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 45556789999999999999999999999999998864
No 71
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.4e-40 Score=360.89 Aligned_cols=255 Identities=23% Similarity=0.325 Sum_probs=207.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 34678889999999999999966 78999999997665444557789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...........
T Consensus 87 ~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 999999999976543 89999999999999999999999999999999999999999999999999986644333333
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
.....||+.|+|||++......+.++||||+|+++|||++|+.||............+..... ....
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------------~~~~ 230 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------------YLNP 230 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT-------------TSTT
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc-------------cCCc
Confidence 446779999999999855444588999999999999999999999865544333333322111 1111
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
....+..+.+++.+|++.||++|||++|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 23456678999999999999999999998763
No 72
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=370.32 Aligned_cols=262 Identities=24% Similarity=0.371 Sum_probs=214.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|.+. +++.||||++..........++.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 44678889999999999999943 467899999976554556678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC---CeEEeeccc
Q 002094 756 LIYEFISSGSLYKHLHDGSS----RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG---EPKVGDFGL 828 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~---~~kl~Dfg~ 828 (967)
+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++||+||||||+||+++.++ .+||+|||+
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 99999999999999976432 12489999999999999999999999999999999999999555 599999999
Q ss_pred ccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCC
Q 002094 829 ARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGR 907 (967)
Q Consensus 829 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (967)
++...............+|+.|+|||.+ ....++.++|||||||++|||++ |+.||....... ....+
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~~~i-------- 299 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFV-------- 299 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH--------
T ss_pred ccccccccccccCCCcCCcccEECHHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH--------
Confidence 9765332333334456678899999988 56679999999999999999998 999997544321 11111
Q ss_pred chhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 908 VEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
....+...+...+..+.+++.+|++.||++|||++|+++.|+.+.+.
T Consensus 300 -----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 300 -----TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----HcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11112334556677899999999999999999999999999887643
No 73
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.7e-40 Score=360.24 Aligned_cols=261 Identities=26% Similarity=0.376 Sum_probs=217.2
Q ss_pred hccCCCCccCCCCceEEEEEEe------CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL------QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|...+.||+|+||.||+|.. .+++.||||++.........+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 3467788999999999999985 2458899999986654555678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEE
Q 002094 756 LIYEFISSGSLYKHLHDGSS---------------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVL 814 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nil 814 (967)
+||||+++++|.+++..... ...+++..++.++.||+.||+|||++||+||||||+||+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIl 182 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL 182 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEE
Confidence 99999999999999986543 123789999999999999999999999999999999999
Q ss_pred eCCCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchH
Q 002094 815 IDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVV 893 (967)
Q Consensus 815 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~ 893 (967)
++.++.+||+|||++................+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhh-cCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999876543333334455678889999988 55678999999999999999999 9999975543211
Q ss_pred hHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 894 VLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.+.+ ........+...+..+.+++.+|++.||++|||++|+++.|+++..
T Consensus 262 --~~~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 --FNLL-------------KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp --HHHH-------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHh-------------hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111 1112233455667789999999999999999999999999998864
No 74
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.4e-40 Score=362.05 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=205.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCc----EEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGR----SVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLL 756 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 756 (967)
+.|+..+.||+|+||.||+|+.. +++ +||+|.+.........+++.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 34688889999999999999954 344 468888866554556788999999999999999999999998754 789
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+||+++|+|.+++..... .+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 94 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999987543 38999999999999999999999999999999999999999999999999998775544
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.........+|+.|+|||.+ .+..++.++||||||+++|||++ |+.||....... ... .+...
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~-------------~~~~~ 235 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISS-------------ILEKG 235 (327)
T ss_dssp C-------CCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH-------------HHHTT
T ss_pred ccccccCCCccccccChHHh-ccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHH-------------HHHcC
Confidence 43344455678899999998 56688999999999999999999 999997554322 111 11222
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.+...+..++..+.+++.+|++.||++|||+.|+++.|+.+..
T Consensus 236 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 236 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 2334456677889999999999999999999999999988765
No 75
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.9e-40 Score=355.48 Aligned_cols=268 Identities=22% Similarity=0.325 Sum_probs=212.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 45788899999999999999954 689999999865432 233568999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ..
T Consensus 91 e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SL 166 (294)
T ss_dssp ECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc-cc
Confidence 99999999999976543 899999999999999999999999999999999999999999999999999866432 22
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||.+ ....++.++||||+|+++|||++|+.||......... ....... .. ....
T Consensus 167 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-----~~~~~~~-~~-----~~~~ 234 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-----IKHIQDS-VP-----NVTT 234 (294)
T ss_dssp --------CCSSCCHHHH-HTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-----HHHHSSC-CC-----CHHH
T ss_pred cccCccccCccccCHhHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhhcc-CC-----Ccch
Confidence 223356689999999998 5567899999999999999999999999755432211 1111111 00 0111
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCC-CHHHHHHHHHhhcCCCCCccc
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRP-DMEEVVNILELIQSPLDGQEE 965 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~evl~~L~~~~~~~~~~~~ 965 (967)
..+.+.+..+.+++.+|++.||++|| +++++.+.|+.+..+-...++
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~ 282 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANED 282 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCC
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcc
Confidence 12344567799999999999999998 999999999998876655544
No 76
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.7e-40 Score=382.99 Aligned_cols=259 Identities=28% Similarity=0.395 Sum_probs=218.0
Q ss_pred ccCCCCccCCCCceEEEEEEeCC-CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 683 LLNKDCELGRGGFGVVYRTILQD-GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
.|+..+.||+|+||.||+|+++. +..||||.+.... ...++|.+|++++++++|||||++++++...+..++||||+
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 35778899999999999999764 8899999997654 35678999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++|+|.+++...... .+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 299 ~~g~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~ 376 (495)
T 1opk_A 299 TYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 376 (495)
T ss_dssp TTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC-CEECC
T ss_pred CCCCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCC-ceeec
Confidence 999999999865433 3899999999999999999999999999999999999999999999999999876432 22223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||||+++|||++ |+.||........ .+ .+....+...
T Consensus 377 ~~~~~~~~y~aPE~~-~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--~~-------------~~~~~~~~~~ 440 (495)
T 1opk_A 377 AGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YE-------------LLEKDYRMER 440 (495)
T ss_dssp TTCCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HH-------------HHHTTCCCCC
T ss_pred CCCcCCcceeCHhHH-hcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--HH-------------HHHcCCCCCC
Confidence 345567889999998 55678999999999999999999 9999976543311 11 1222334445
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
+..++.++.+++.+||+.||++|||+.++++.|+.+.+...
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 481 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSC
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhccc
Confidence 66778889999999999999999999999999999876544
No 77
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-40 Score=364.72 Aligned_cols=266 Identities=23% Similarity=0.347 Sum_probs=213.8
Q ss_pred hccCCCCccCCCCceEEEEEEe------CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL------QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 754 (967)
+.|+..+.||+|+||.||+|.. .++..||||++.........+.+.+|+++++++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4568888999999999999995 245689999997654444557899999999999 899999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEE
Q 002094 755 LLIYEFISSGSLYKHLHDGSSR--------------------NCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVL 814 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nil 814 (967)
++||||+++|+|.+++...... ..+++..++.++.||+.||+|||++||+||||||+||+
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl 204 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL 204 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEE
Confidence 9999999999999999865431 23789999999999999999999999999999999999
Q ss_pred eCCCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchH
Q 002094 815 IDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVV 893 (967)
Q Consensus 815 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~ 893 (967)
++.++.+||+|||++................+|+.|+|||.+ ....++.++||||||+++|||++ |+.||........
T Consensus 205 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 283 (344)
T 1rjb_A 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283 (344)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred EcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh-ccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence 999999999999999876543333344456678899999988 55678999999999999999998 9999976543322
Q ss_pred hHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 894 VLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
....+. .......+...+.++.+++.+|++.||++|||+.|+++.|+.+.....+
T Consensus 284 -~~~~~~-------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 284 -FYKLIQ-------------NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp -HHHHHH-------------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred -HHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 111121 1122334556677899999999999999999999999999998876544
No 78
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.8e-40 Score=363.56 Aligned_cols=276 Identities=26% Similarity=0.388 Sum_probs=218.2
Q ss_pred ccCCCCccCCCCceEEEEEEeC-----CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC--Ccee
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-----DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP--SLQL 755 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 755 (967)
.|+..+.||+|+||.||++.++ +++.||||++.........+.+.+|++++++++||||+++++++.+. ...+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3578889999999999998743 68899999998765455567899999999999999999999999874 5678
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+||||+++|+|.+++.... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 112 lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 9999999999999997643 789999999999999999999999999999999999999999999999999877543
Q ss_pred ccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 836 DRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 836 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
... .......+++.|+|||.+ ....++.++||||+|+++|||++|+.||............+...........+..+.
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECL-KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCCceeeChHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 221 223345678889999998 566788999999999999999999999964322211111110011111112233333
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
......+...+.++.+++.+|++.||++|||++|+++.|+.+.+.+.++
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 3444556777888999999999999999999999999999987665543
No 79
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-40 Score=361.58 Aligned_cols=273 Identities=24% Similarity=0.365 Sum_probs=210.4
Q ss_pred hccCCCCccCCCCceEEEEEEe-----CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC--Cce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-----QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP--SLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 754 (967)
+.|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 4568888999999999999984 368899999997554 34457899999999999999999999998643 558
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999999999987543 388999999999999999999999999999999999999999999999999987643
Q ss_pred Cccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc----cCCch
Q 002094 835 LDRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE----DGRVE 909 (967)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~ 909 (967)
.... .......++..|+|||.+ ....++.++||||+|+++|||++|..||.....+ .......... .....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ---------CTTCGGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHh-cCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 2221 222344567789999998 5567899999999999999999999998643211 1111100000 00011
Q ss_pred hhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 910 DCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
+......+...+..++.++.+++.+|++.||++|||++|+++.|+++++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 1222223444566778889999999999999999999999999999987654
No 80
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.5e-39 Score=357.26 Aligned_cols=263 Identities=26% Similarity=0.391 Sum_probs=218.6
Q ss_pred hccCCCCccCCCCceEEEEEEe------CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL------QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 754 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++.........+.+.+|+++++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4567888999999999999984 346899999998765445567899999999999 999999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSR---------------NCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG 819 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~---------------~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~ 819 (967)
++||||+++|+|.+++...... ..+++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 182 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCC
Confidence 9999999999999999865431 1389999999999999999999999999999999999999999
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 898 (967)
.+||+|||++................+++.|+|||.+ ....++.++||||+|+++|||++ |+.||......... ...
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~ 260 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-YKM 260 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH-HHH
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH-HHH
Confidence 9999999999877554433344456678899999988 55678999999999999999999 99999765443221 111
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
+. ...+...+...+..+.+++.+|++.||++|||++|+++.|+++.+.
T Consensus 261 ~~-------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 261 IK-------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HH-------------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hc-------------cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 1122233455677899999999999999999999999999987643
No 81
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.6e-40 Score=376.41 Aligned_cols=262 Identities=29% Similarity=0.418 Sum_probs=211.5
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|..+++..||||++.... ...++|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 3467788999999999999999888899999997654 346789999999999999999999999866 6789999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++|+|.+++...... .+++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 261 ~~gsL~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~ 338 (452)
T 1fmk_A 261 SKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTAR 338 (452)
T ss_dssp TTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred cCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCC-ceecc
Confidence 999999999753222 2889999999999999999999999999999999999999999999999999866432 12222
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||||+++|||++ |+.||........ ... +....+...
T Consensus 339 ~~~~~~~~y~aPE~~-~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-----~~~----------i~~~~~~~~ 402 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQ----------VERGYRMPC 402 (452)
T ss_dssp ----CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHH----------HHTTCCCCC
T ss_pred cCCcccccccCHhHH-hcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH-----HHH----------HHcCCCCCC
Confidence 345567889999988 55678999999999999999999 9999975543211 111 111223345
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
+..++..+.+++.+||+.||++|||++++++.|+++....+++.
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~ 446 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 446 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCC
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCccc
Confidence 66778889999999999999999999999999999987665543
No 82
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.4e-38 Score=367.38 Aligned_cols=346 Identities=25% Similarity=0.411 Sum_probs=157.6
Q ss_pred CCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccce
Q 002094 91 RLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLES 170 (967)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 170 (967)
.+++|+.|++++++++. +| .+..+++|++|+|++|.+++. |. +..+++|++|+|++|++++..+ ++.+++|++
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34555666666665553 22 245555555555555555532 22 3455555555555555553322 445555555
Q ss_pred eeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEecccccc
Q 002094 171 VNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSL 250 (967)
Q Consensus 171 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 250 (967)
|+|++|++++..+ +..+++|++|+|++|.+++. + .++.+++|++|+++ |.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-------------------------~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-------------------------S-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-------------------------G-GGTTCTTCSEEEEE-ESC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-------------------------h-hhccCCcccEeecC-Ccc
Confidence 5555555443321 44444444444444444432 1 24444444444443 223
Q ss_pred CCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhh
Q 002094 251 SGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESM 330 (967)
Q Consensus 251 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 330 (967)
.+.. .+.++++|+.|++++|.+++. ..+..+++|++|++++|++.+..| ++.+++|+.|++++|++++. ..+
T Consensus 168 ~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l 239 (466)
T 1o6v_A 168 TDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTL 239 (466)
T ss_dssp CCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGG
T ss_pred cCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhh
Confidence 2211 144445555555555554432 124444555555555555443322 34444555555555554432 234
Q ss_pred hcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCccccc
Q 002094 331 MNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLS 410 (967)
Q Consensus 331 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 410 (967)
..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +.
T Consensus 240 ~~l~~L~~L~l~~n~l~~~~~------------------------------~~~l~~L~~L~l~~n~l~~~~~--~~--- 284 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQISNLAP------------------------------LSGLTKLTELKLGANQISNISP--LA--- 284 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG------------------------------GTTCTTCSEEECCSSCCCCCGG--GT---
T ss_pred hcCCCCCEEECCCCccccchh------------------------------hhcCCCCCEEECCCCccCcccc--cc---
Confidence 444445555554444442111 0122344444444444443322 33
Q ss_pred ccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeecc
Q 002094 411 SLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILS 490 (967)
Q Consensus 411 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 490 (967)
.+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|+++
T Consensus 285 ---------------------~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 285 ---------------------GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY 339 (466)
T ss_dssp ---------------------TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC
T ss_pred ---------------------CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC
Confidence 33444444444444443222 3444444555555554444333 4445555555555
Q ss_pred CCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccc
Q 002094 491 QNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHG 544 (967)
Q Consensus 491 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 544 (967)
+|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 340 ~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 340 NNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555433 234555555555555555554444 4455555555555555554
No 83
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.5e-40 Score=358.79 Aligned_cols=271 Identities=26% Similarity=0.354 Sum_probs=211.5
Q ss_pred hccCCCCccCCCCceEEEEEEe-----CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC--Cce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-----QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP--SLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 754 (967)
..|+..+.||+|+||.||+|++ .+++.||||++.........+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4467888999999999999983 368999999998665555668899999999999999999999999876 667
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 999999999999999965433 289999999999999999999999999999999999999999999999999987654
Q ss_pred Cccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc---cCCchh
Q 002094 835 LDRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE---DGRVED 910 (967)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~ 910 (967)
.... .......+|..|+|||.+ ....++.++||||+|+++|||++|+.|+...... .......... ......
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECL-MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHH
T ss_pred CCcceeccCCCCCCccccCCeee-cCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHH
Confidence 3221 233456678889999988 5567889999999999999999999987422110 0000000000 000111
Q ss_pred hcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 911 CVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
......+...+...+..+.+++.+|++.||++|||++|++++|+++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 255 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 122222344566777889999999999999999999999999998754
No 84
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-39 Score=360.43 Aligned_cols=263 Identities=27% Similarity=0.394 Sum_probs=216.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC--------CCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCC
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ--------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPS 752 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 752 (967)
+.|+..+.||+|+||.||+|... ++..||||++.........+.+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 45688899999999999999863 46789999998765455567899999999999 8999999999999999
Q ss_pred ceeEEEEecCCCchhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSS-------------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG 819 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~ 819 (967)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCC
Confidence 99999999999999999986542 12388999999999999999999999999999999999999999
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 898 (967)
.+||+|||++................+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... ....
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~ 271 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKL 271 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHh-cCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--HHHH
Confidence 9999999999876543333334455677889999988 55678999999999999999999 999997543321 1111
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
+. ...+...+...+.++.+++.+|++.||++|||+.|+++.|+++....
T Consensus 272 ~~-------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 272 LK-------------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HH-------------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred Hh-------------cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11 11122345566778999999999999999999999999999987543
No 85
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=373.82 Aligned_cols=330 Identities=17% Similarity=0.147 Sum_probs=224.1
Q ss_pred cCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEcc
Q 002094 191 SLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLK 270 (967)
Q Consensus 191 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~ 270 (967)
+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 44455555555544444445555555555555555554445555555555555555555554444445555555555555
Q ss_pred CCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCC
Q 002094 271 GNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNI 350 (967)
Q Consensus 271 ~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 350 (967)
+|++++..+..|..+++|++|+|++|++.+..+..|..+++|+.|+|++|++++..+..|.++++|+.|++++|.+
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i---- 188 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNI---- 188 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCC----
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcC----
Confidence 5555555555556666666666666666655555566666666666666666654444555555555555554444
Q ss_pred ChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCc
Q 002094 351 PTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASI 430 (967)
Q Consensus 351 p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 430 (967)
.+..+..|..+++|+.|++++|.+.+.+|..+
T Consensus 189 ------------------------------------------------~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 220 (477)
T 2id5_A 189 ------------------------------------------------NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC 220 (477)
T ss_dssp ------------------------------------------------CEECTTCSCSCTTCCEEEEECCTTCCEECTTT
T ss_pred ------------------------------------------------cEeChhhcccCcccceeeCCCCccccccCccc
Confidence 44444455566666666666666666666666
Q ss_pred CCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccE
Q 002094 431 GKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKY 510 (967)
Q Consensus 431 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 510 (967)
....+|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++|++
T Consensus 221 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 300 (477)
T 2id5_A 221 LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 300 (477)
T ss_dssp TTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCE
T ss_pred ccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCE
Confidence 66668888888888888555567888889999999999998878888899999999999999999888899999999999
Q ss_pred EeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCCCCCCcccc
Q 002094 511 VDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCGSVVN 572 (967)
Q Consensus 511 L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~ 572 (967)
|+|++|+|++..+..|..+++|+.|+|++|+|.+.++..+++.+.....+.++...|..+..
T Consensus 301 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 301 LNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp EECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred EECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchH
Confidence 99999999988888888999999999999999987775555555555667888888877653
No 86
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3e-38 Score=366.56 Aligned_cols=345 Identities=24% Similarity=0.360 Sum_probs=223.5
Q ss_pred CCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeee
Q 002094 141 CGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIK 220 (967)
Q Consensus 141 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 220 (967)
+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++..+ +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4455555555555553 33 25555566666666665554332 5556666666666666554443 55566666666
Q ss_pred ccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccccc
Q 002094 221 LGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSG 300 (967)
Q Consensus 221 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 300 (967)
+++|++++..+ +..+++|++|++++|.+++. + .+..+++|+.|+++ |.+.+..+ +.++++|++|++++|.+.+
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC
Confidence 66666554322 56666666666666666642 2 35566666666664 33332221 4555555555555555442
Q ss_pred ccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccc
Q 002094 301 RIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFAS 380 (967)
Q Consensus 301 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 380 (967)
. ..+..+++|+.|++++|.+.+..| .
T Consensus 192 ~--------------------------~~l~~l~~L~~L~l~~n~l~~~~~-~--------------------------- 217 (466)
T 1o6v_A 192 I--------------------------SVLAKLTNLESLIATNNQISDITP-L--------------------------- 217 (466)
T ss_dssp C--------------------------GGGGGCTTCSEEECCSSCCCCCGG-G---------------------------
T ss_pred C--------------------------hhhccCCCCCEEEecCCccccccc-c---------------------------
Confidence 2 224445555555555555543222 0
Q ss_pred cccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCC
Q 002094 381 MKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSL 460 (967)
Q Consensus 381 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 460 (967)
..+++|+.|++++|++++. ..+..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|
T Consensus 218 --~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 289 (466)
T 1o6v_A 218 --GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTAL 289 (466)
T ss_dssp --GGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTC
T ss_pred --cccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCcc
Confidence 1123444444545444432 235556666666666666665444 7778889999999999986544 8899999
Q ss_pred CEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCC
Q 002094 461 KELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHN 540 (967)
Q Consensus 461 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 540 (967)
+.|+|++|++++..+ ++.+++|+.|+|++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN 363 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCC
Confidence 999999999997655 8999999999999999998776 88999999999999999976 57899999999999999
Q ss_pred cccccCCCCCCCCccCCCcccCCCCCC
Q 002094 541 HLHGELPVGGFFNTISPSSVSGNPSLC 567 (967)
Q Consensus 541 ~l~~~~p~~~~~~~~~~~~~~~n~~lc 567 (967)
++++.+| ...+..+....+.+|++..
T Consensus 364 ~l~~~~~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 364 QISDLTP-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCCBCGG-GTTCTTCCEEECCCEEEEC
T ss_pred ccCccch-hhcCCCCCEEeccCCcccC
Confidence 9999888 3334556666677887654
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=352.26 Aligned_cols=272 Identities=22% Similarity=0.280 Sum_probs=216.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC--ceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS--LQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 758 (967)
+.|...+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45788899999999999999976 489999999986655556778899999999999999999999998655 678999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe----CCCCCeEEeecccccccCC
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI----DSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill----~~~~~~kl~Dfg~a~~~~~ 834 (967)
||+++++|.+++........+++..++.++.|++.||+|||++||+||||||+||++ +.++.+||+|||+++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999999999876554458999999999999999999999999999999999999 7788899999999987643
Q ss_pred CccccccccccccccccCcccccC-------cccCCcccchhhHHHHHHHHHcCCCCCCCCccch---HhHHHHHHhhhc
Q 002094 835 LDRCILSSKIQSALGYMAPEFACR-------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDV---VVLCDMVRGALE 904 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~---~~~~~~~~~~~~ 904 (967)
.. ......||+.|+|||++.. ...++.++||||+|+++|||++|+.||....... .....+..+..
T Consensus 169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p- 244 (319)
T 4euu_A 169 DE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP- 244 (319)
T ss_dssp TC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC-
T ss_pred CC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC-
Confidence 22 2334568999999998732 4678999999999999999999999997433322 22222222111
Q ss_pred cCCchhhc-----------chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhc
Q 002094 905 DGRVEDCV-----------DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQ 957 (967)
Q Consensus 905 ~~~~~~~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~ 957 (967)
...+.... +.......+...+..+.+++.+|++.||++|||++|+++...+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00000000 001112345677888999999999999999999999999887654
No 88
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-39 Score=345.87 Aligned_cols=256 Identities=27% Similarity=0.398 Sum_probs=213.2
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 3467788999999999999999889999999998654 34578999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++++|.+++..... .+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||.+...... .....
T Consensus 86 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHST
T ss_pred CCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc-ccccc
Confidence 99999999986533 3789999999999999999999999999999999999999999999999999866431 22223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... ...... ...+...
T Consensus 163 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~i~----------~~~~~~~ 226 (267)
T 3t9t_A 163 TGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVEDIS----------TGFRLYK 226 (267)
T ss_dssp TSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHH----------TTCCCCC
T ss_pred ccccccccccChhhh-cCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-----HHHHHh----------cCCcCCC
Confidence 345567889999998 55678999999999999999999 999997543321 111111 1112223
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+...+..+.+++.+|++.||++|||++|+++.|+++.+
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 44556789999999999999999999999999999864
No 89
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.7e-39 Score=349.19 Aligned_cols=257 Identities=26% Similarity=0.350 Sum_probs=200.3
Q ss_pred hccCCCCccCCCCceEEEEEEeCC----CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD----GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|.... +..||+|++.........+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 456788899999999999999643 45799999876554455678999999999999999999999984 5678999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 170 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST- 170 (281)
T ss_dssp EECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc-
Confidence 999999999999986532 38999999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
........+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ...+. ...
T Consensus 171 ~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~i~-------------~~~ 234 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIE-------------NGE 234 (281)
T ss_dssp --------CCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHH-------------TTC
T ss_pred ccccccCCCcccccChhhc-ccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHHHH-------------cCC
Confidence 1222344567889999988 56678999999999999999997 9999975543321 11111 111
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+...+...+..+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 223456677889999999999999999999999999998864
No 90
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.2e-39 Score=359.75 Aligned_cols=257 Identities=29% Similarity=0.397 Sum_probs=206.9
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCc----EEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGR----SVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
.|+..+.||+|+||.||+|... +++ +||+|.+...........+.+|+.++++++||||+++++++. .+..++|
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v 92 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV 92 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence 4677889999999999999964 344 388888765543344456889999999999999999999885 5668899
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.+++..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp EECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred EEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999999999976532 388899999999999999999999999999999999999999999999999988765444
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
........+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ .+.+ ....
T Consensus 171 ~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~-------------~~~~ 234 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESI-HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--PDLL-------------EKGE 234 (325)
T ss_dssp CCC-----CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--HHHH-------------HTTC
T ss_pred cccccCCCCcccccChHHh-ccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--HHHH-------------HcCC
Confidence 4444566788899999998 56679999999999999999999 9999975443211 1111 1112
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+...+..++.++.+++.+|++.||++|||++|+++.|+++..
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 235 RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 233344556678899999999999999999999999998764
No 91
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.3e-39 Score=352.85 Aligned_cols=248 Identities=23% Similarity=0.294 Sum_probs=206.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|+.+ +|+.||+|++..... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 34678889999999999999965 689999999976431 234677899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.... ..
T Consensus 85 E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--TT
T ss_pred eCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc--CC
Confidence 99999999999976443 88999999999999999999999999999999999999999999999999975432 11
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||++ ....++.++||||+||++|||++|+.||...... .....+... ..
T Consensus 160 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~---------------~~ 222 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILME---------------EI 222 (337)
T ss_dssp CCBCCCEECGGGCCGGGG-SSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC---------------CC
T ss_pred CcccccccChhhCChhhh-cCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-HHHHHHHcC---------------CC
Confidence 223456799999999998 5667899999999999999999999999754322 111111110 12
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRP-----DMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 951 (967)
.++...+.++.+++.+|++.||++|| +++|+++
T Consensus 223 ~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 24556677899999999999999999 8998865
No 92
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.8e-39 Score=348.70 Aligned_cols=263 Identities=25% Similarity=0.448 Sum_probs=199.8
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|+.. ..||||++..... ....+.+.+|++++++++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 45788889999999999999864 4699999976543 33457899999999999999999999965 55678999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...........
T Consensus 101 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999975433 389999999999999999999999999999999999999999999999999976644333333
Q ss_pred cccccccccccCccccc--CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 841 SSKIQSALGYMAPEFAC--RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~--~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.....||+.|+|||.+. ....++.++||||+|+++|||++|+.||.......... +.+........ ..
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~---------~~ 248 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII-EMVGRGSLSPD---------LS 248 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHH-HHHHHTSCCCC---------TT
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHH-HHhcccccCcc---------hh
Confidence 44567899999999873 24567889999999999999999999997654433222 22211110000 11
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.....++..+.+++.+|++.||++|||++|+++.|+++.++
T Consensus 249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 12345667899999999999999999999999999998753
No 93
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.7e-39 Score=356.91 Aligned_cols=263 Identities=25% Similarity=0.334 Sum_probs=198.0
Q ss_pred hccCCCCccCCCCceEEEEEEeCCC----cEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce--
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDG----RSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ-- 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 754 (967)
+.|+..+.||+|+||.||+|..... ..||||++..... ....+.+.+|++++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 3467888999999999999996543 2799999976532 34467899999999999999999999999877655
Q ss_pred ----eEEEEecCCCchhhhhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 755 ----LLIYEFISSGSLYKHLHDGSS---RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 755 ----~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecc
Confidence 899999999999999964321 1148999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccC
Q 002094 828 LARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDG 906 (967)
Q Consensus 828 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (967)
+++...............+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ...+.
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~~------- 253 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYLI------- 253 (323)
T ss_dssp C-----------------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHHH-------
T ss_pred ccccccccccccccccccCcccccCchhh-cCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-HHHHh-------
Confidence 99876543333334455677889999998 56678999999999999999999 9999975543321 11111
Q ss_pred CchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 907 RVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
.......+...+.++.+++.+|++.||++|||+.++++.|+++....
T Consensus 254 -------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 254 -------GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -------cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11122345566778999999999999999999999999999987543
No 94
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.7e-39 Score=352.24 Aligned_cols=263 Identities=25% Similarity=0.329 Sum_probs=204.1
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||+||+|+..+|+.||||++..... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 45788899999999999999998899999999976543 23356789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++ +|.+++..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...... ..
T Consensus 101 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~ 175 (311)
T 3niz_A 101 MEK-DLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--RS 175 (311)
T ss_dssp CSE-EHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C-
T ss_pred CCC-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--cc
Confidence 985 88888876443 38999999999999999999999999999999999999999999999999998764321 22
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc---h---
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD---A--- 914 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 914 (967)
.....+|+.|+|||.+.....++.++||||+|+++|||++|+.||........ ...+.. ........++.. .
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~-~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFS-ILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHH-HHCCCCTTTSGGGTTSHHH
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH-HHCCCChHHhhhhhccchh
Confidence 33456899999999985556789999999999999999999999975544322 222221 111111111000 0
Q ss_pred ---hh-------cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 915 ---RL-------RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 915 ---~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.. .....+..+.++.+++.+|++.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 00012234567899999999999999999999986
No 95
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=354.80 Aligned_cols=259 Identities=24% Similarity=0.373 Sum_probs=205.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCc----EEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGR----SVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLL 756 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 756 (967)
+.|+..+.||+|+||.||+|... +++ +||+|.+.........+.+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 34678889999999999999954 344 368887766555566788999999999999999999999998754 789
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 94 v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999987543 28999999999999999999999999999999999999999999999999998765433
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.........+|+.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ... +...
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~-------------~~~~ 235 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESI-LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSI-------------LEKG 235 (327)
T ss_dssp --------CCCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHH-------------HHTT
T ss_pred ccccccCCCccccccCHHHH-cCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHH-------------HHcC
Confidence 33334455677889999998 56678999999999999999999 9999975543321 111 1222
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.....+...+.++.+++.+|++.||++|||++|+++.|+++...
T Consensus 236 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 236 ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 23334566777899999999999999999999999999988753
No 96
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.9e-39 Score=357.28 Aligned_cols=252 Identities=22% Similarity=0.340 Sum_probs=205.8
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-----ccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-----KSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 754 (967)
.+.|+..+.||+|+||.||+|+.+ +|+.||||.+...... ...+.+.+|+.++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 345788899999999999999965 6899999999765432 2357899999999999999999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC----CeEEeeccccc
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG----EPKVGDFGLAR 830 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~----~~kl~Dfg~a~ 830 (967)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++ .+||+|||++.
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999997643 389999999999999999999999999999999999998776 79999999998
Q ss_pred ccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchh
Q 002094 831 LLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVED 910 (967)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (967)
..... .......||+.|+|||++ ....++.++||||+||++|+|++|..||...... ..+..+......
T Consensus 168 ~~~~~---~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~------ 236 (361)
T 2yab_A 168 EIEDG---VEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITAVSYD------ 236 (361)
T ss_dssp ECCTT---CCCCCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCC------
T ss_pred EcCCC---CccccCCCCccEECchHH-cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCC------
Confidence 76432 223456799999999998 5667899999999999999999999999754332 222221111000
Q ss_pred hcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 911 CVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+.. ++...+..+.+++.+|+..||++|||++|+++
T Consensus 237 -~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEE----FFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCch----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0001 11234567899999999999999999999875
No 97
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4e-39 Score=370.98 Aligned_cols=252 Identities=25% Similarity=0.375 Sum_probs=209.9
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC-ceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS-LQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|..+ ++.||||+++... ..+.|.+|++++++++||||+++++++.+.. ..++||||
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 34577789999999999999986 7899999997653 4567999999999999999999999987665 78999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++|+|.++++..... .+++..++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----
Confidence 9999999999865432 2789999999999999999999999999999999999999999999999999854321
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
.....+++.|+|||.+ ....++.++||||||+++|||++ |+.||........ . ..+....+..
T Consensus 343 ~~~~~~~~~y~aPE~~-~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~-------------~~i~~~~~~~ 406 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--V-------------PRVEKGYKMD 406 (450)
T ss_dssp ----CCCTTTSCHHHH-HSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--H-------------HHHHTTCCCC
T ss_pred ccCCCCCcceeCHHHh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--H-------------HHHHcCCCCC
Confidence 1223567889999998 56679999999999999999998 9999975543221 1 1111223344
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.+..++..+.++|.+||+.||++|||+.++++.|+++...
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 5677888999999999999999999999999999998743
No 98
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-39 Score=353.22 Aligned_cols=259 Identities=27% Similarity=0.399 Sum_probs=216.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCC-CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD-GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 346778899999999999999764 8899999997544 4567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++++|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...... ....
T Consensus 91 ~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~ 168 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTA 168 (288)
T ss_dssp CTTEEHHHHHHHCCTT-TSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS-SSEE
T ss_pred CCCCcHHHHHHhcccC-CccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCC-cccc
Confidence 9999999999875443 3899999999999999999999999999999999999999999999999999876532 2233
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
.....+++.|+|||.+ ....++.++||||+|+++|+|++ |..||........ .+. .....+..
T Consensus 169 ~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~--~~~-------------~~~~~~~~ 232 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YEL-------------LEKDYRME 232 (288)
T ss_dssp ETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHH-------------HHTTCCCC
T ss_pred ccCCccccCcCChhhh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH-------------HhccCCCC
Confidence 3455677889999988 55678999999999999999999 9999975443211 111 11222334
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
.+...+..+.+++.+|++.||++|||++|+++.|+.+.++.
T Consensus 233 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 45667788999999999999999999999999999876543
No 99
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.1e-38 Score=343.46 Aligned_cols=254 Identities=29% Similarity=0.542 Sum_probs=207.8
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccH------HHHHHHHHHHcCCCCCceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQ------EDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 754 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++......... +.+.+|++++++++||||+++++++.++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 34677889999999999999964 7899999998665432221 67999999999999999999999986554
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCEEeCCCCC-----eEEeecc
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN--IIHYNLKSTNVLIDSSGE-----PKVGDFG 827 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--ivH~Dik~~Nill~~~~~-----~kl~Dfg 827 (967)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||++| |+||||||+||+++.++. +||+|||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred eEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 799999999999998876543 3899999999999999999999999 999999999999988776 9999999
Q ss_pred cccccCCCccccccccccccccccCccccc-CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccC
Q 002094 828 LARLLPMLDRCILSSKIQSALGYMAPEFAC-RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDG 906 (967)
Q Consensus 828 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (967)
+++.... ......||+.|+|||.+. ....++.++||||+|+++|||++|+.||.............+.
T Consensus 175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------ 243 (287)
T 4f0f_A 175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR------ 243 (287)
T ss_dssp TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH------
T ss_pred ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh------
Confidence 9974432 233467899999999873 3445788999999999999999999999765544332222221
Q ss_pred CchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhh
Q 002094 907 RVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELI 956 (967)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~ 956 (967)
........+...+..+.+++.+|++.||++|||++|+++.|+++
T Consensus 244 ------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 ------EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ------HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ------ccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 12223345667778899999999999999999999999999864
No 100
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=9.3e-39 Score=343.09 Aligned_cols=253 Identities=27% Similarity=0.397 Sum_probs=208.8
Q ss_pred ccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcC--CceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP--SLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|+.+ ++.||||++..... ....+.+.+|++++++++||||+++++++.++ +..++|||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 4677889999999999999986 89999999976543 34456799999999999999999999999877 77899999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN--IIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|+++|+|.++++..... .+++..++.++.|++.||+|||+++ ++||||||+||+++.++.++++|||++....
T Consensus 90 ~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---- 164 (271)
T 3kmu_A 90 WMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---- 164 (271)
T ss_dssp CCTTCBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS----
T ss_pred ccCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec----
Confidence 99999999999875432 3899999999999999999999999 9999999999999999999999998875432
Q ss_pred ccccccccccccccCcccccCc--ccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 838 CILSSKIQSALGYMAPEFACRT--VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~--~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.....||+.|+|||.+... ..++.++||||+|+++|||++|+.||........ ... .....
T Consensus 165 ---~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~-------------~~~~~ 227 (271)
T 3kmu_A 165 ---SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMK-------------VALEG 227 (271)
T ss_dssp ---CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHH-------------HHHSC
T ss_pred ---ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHH-------------HHhcC
Confidence 2345678999999988432 2233489999999999999999999975543221 111 11112
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.+...+...+..+.+++.+|++.||++|||++|+++.|+++.+
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 2334556677889999999999999999999999999999875
No 101
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-39 Score=360.92 Aligned_cols=262 Identities=26% Similarity=0.357 Sum_probs=202.0
Q ss_pred cCCCCccCCCCceEEEEEEeC--CC--cEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEc-CCceeEEE
Q 002094 684 LNKDCELGRGGFGVVYRTILQ--DG--RSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWT-PSLQLLIY 758 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 758 (967)
|+..+.||+|+||.||+|... ++ ..||||.+.........+++.+|+.++++++||||+++++++.+ ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 456678999999999999854 22 46899998765544566889999999999999999999998754 46789999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++|+|.+++..... .+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++........
T Consensus 171 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp ECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred ECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999976443 2789999999999999999999999999999999999999999999999999865432211
Q ss_pred --cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 839 --ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 839 --~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.......+++.|+|||.+ ....++.++||||||+++|||++ |.+||........ ...+. ..
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~~~-------------~~ 312 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLL-------------QG 312 (373)
T ss_dssp ---------CCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHHHH-------------TT
T ss_pred cccccCCCCCcccccChHHh-cCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHHHH-------------cC
Confidence 122345577889999998 56688999999999999999999 7888864433211 11111 11
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
.+...+..++..+.+++.+||+.||++|||++|+++.|+++...+.+.
T Consensus 313 ~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 313 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 122335566778999999999999999999999999999998776654
No 102
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.8e-38 Score=347.64 Aligned_cols=248 Identities=21% Similarity=0.316 Sum_probs=204.4
Q ss_pred cCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecC
Q 002094 684 LNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFIS 762 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 762 (967)
|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 125 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence 455678999999999999976 79999999997654 3456789999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccccc
Q 002094 763 SGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSS 842 (967)
Q Consensus 763 ~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 842 (967)
+++|.+++... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++....... ....
T Consensus 126 ~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 199 (321)
T 2c30_A 126 GGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRK 199 (321)
T ss_dssp SCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBC
T ss_pred CCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc--cccc
Confidence 99999998653 28999999999999999999999999999999999999999999999999998664321 2234
Q ss_pred cccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCCh
Q 002094 843 KIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPA 922 (967)
Q Consensus 843 ~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (967)
...||+.|+|||.+ ....++.++||||+|+++|||++|+.||...... ... ..+... . .+ ....+.
T Consensus 200 ~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~-~~~~~~---~------~~--~~~~~~ 265 (321)
T 2c30_A 200 SLVGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAM-KRLRDS---P------PP--KLKNSH 265 (321)
T ss_dssp CCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHH-HHHHHS---S------CC--CCTTGG
T ss_pred cccCCccccCHhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH-HHHhcC---C------CC--CcCccc
Confidence 56789999999998 5667899999999999999999999999754322 111 111110 0 00 011123
Q ss_pred hhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 923 DEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..+..+.+++.+|++.||++|||++|+++.
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 456679999999999999999999999863
No 103
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.7e-39 Score=348.48 Aligned_cols=264 Identities=26% Similarity=0.364 Sum_probs=210.2
Q ss_pred hccCCCCccCCCCceEEEEEEeCC----CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEE-cCCceeE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD----GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYW-TPSLQLL 756 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 756 (967)
..|+..+.||+|+||.||+|+..+ ...||+|.+.........+.+.+|++++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 346777899999999999998543 23689999876554555678999999999999999999999864 4567899
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
||||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 105 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999976433 37899999999999999999999999999999999999999999999999998664322
Q ss_pred c--ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 837 R--CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 837 ~--~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
. ........+|+.|+|||.+ ....++.++||||+|+++|||++ |.+||........ ...+.
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~~~~~-------------- 246 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLL-------------- 246 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-HHHHH--------------
T ss_pred hhccccccCCCCCccccChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-HHHHh--------------
Confidence 1 1223345677889999988 56678999999999999999999 6666654332211 11111
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
.......+...+..+.+++.+|++.||++|||++|+++.|+++...+.+.
T Consensus 247 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 247 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 11122234556678999999999999999999999999999999877664
No 104
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-38 Score=344.78 Aligned_cols=262 Identities=24% Similarity=0.332 Sum_probs=203.1
Q ss_pred ccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 683 LLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
.|+..+.||+|+||.||+|...+|+.||||++..... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (288)
T 1ob3_A 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82 (288)
T ss_dssp SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence 3677889999999999999998899999999976543 223467889999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++ +|.+++..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ....
T Consensus 83 ~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 157 (288)
T 1ob3_A 83 DQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKY 157 (288)
T ss_dssp SE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred CC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc--cccc
Confidence 86 99998876433 3889999999999999999999999999999999999999999999999999765421 1122
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhc--------c
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV--------D 913 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 913 (967)
....+|+.|+|||.+.....++.++||||+|+++|||++|+.||...... .....+.+. ........+. +
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRI-LGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHH-HCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-HCCCChhhchhhhcccccc
Confidence 34568999999999855567899999999999999999999999755432 222222221 1111100000 0
Q ss_pred hhhc-------CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 914 ARLR-------GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 914 ~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+... ..+....+.++.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 0112345677999999999999999999999875
No 105
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.8e-39 Score=354.59 Aligned_cols=267 Identities=27% Similarity=0.348 Sum_probs=217.5
Q ss_pred hhccCCCCccCCCCceEEEEEEe------CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCC-
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL------QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPS- 752 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~- 752 (967)
.+.|+..+.||+|+||.||+|.. .+++.||||++.........+.+.+|+++++++ +||||+++++++..++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 35578889999999999999984 356899999998765445567899999999999 7999999999987654
Q ss_pred ceeEEEEecCCCchhhhhhcCCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSSR-------------NCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG 819 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~ 819 (967)
..++||||+++++|.+++...... ..+++..++.++.|++.||+|||++||+||||||+||+++.++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC
Confidence 489999999999999999875431 2278999999999999999999999999999999999999999
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 898 (967)
.+||+|||+++...............+|+.|+|||.+ ....++.++||||+|+++|||++ |+.||............+
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI-FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhh-ccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 9999999999876543333344556678899999988 56678999999999999999998 999997554432221111
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
.. ......+...+..+.+++.+|++.||++|||+.|+++.|+.+.++-.+
T Consensus 265 ~~--------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 314 (316)
T 2xir_A 265 KE--------------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314 (316)
T ss_dssp HH--------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred cc--------------CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcc
Confidence 11 112233455667899999999999999999999999999998765443
No 106
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.8e-39 Score=359.89 Aligned_cols=263 Identities=25% Similarity=0.375 Sum_probs=215.2
Q ss_pred hccCCCCccCCCCceEEEEEEeCC------CcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD------GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 754 (967)
+.|+..+.||+|+||.||+|.... ...||+|.+.........+.+.+|+++++++ +||||+++++++..++..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 446778899999999999999642 2479999998765445567899999999999 899999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEE
Q 002094 755 LLIYEFISSGSLYKHLHDGSS-----------RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKV 823 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl 823 (967)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEB
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEE
Confidence 999999999999999975321 123789999999999999999999999999999999999999999999
Q ss_pred eecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhh
Q 002094 824 GDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGA 902 (967)
Q Consensus 824 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~ 902 (967)
+|||++................+++.|+|||.+ ....++.++||||||+++|||++ |..||........ ....+.
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~-- 281 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLVK-- 281 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHHHHH--
T ss_pred CccccccccccccceeecCCCCCCccccCHHHh-ccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHHHHh--
Confidence 999999866443333334456678899999988 55678999999999999999999 9999975443322 111111
Q ss_pred hccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 903 LEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.......+...+..+.+++.+|++.||++|||++|+++.|+++.++
T Consensus 282 -----------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 282 -----------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp -----------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------cCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1122233455667899999999999999999999999999987643
No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=349.36 Aligned_cols=255 Identities=29% Similarity=0.500 Sum_probs=203.8
Q ss_pred ccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecC
Q 002094 683 LLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFIS 762 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 762 (967)
.|+..+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 4677889999999999999986 789999998643 34678999999999999999999999876 45799999999
Q ss_pred CCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCCCCEEeCCCCC-eEEeecccccccCCCccc
Q 002094 763 SGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHH---TNIIHYNLKSTNVLIDSSGE-PKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 763 ~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~---~~ivH~Dik~~Nill~~~~~-~kl~Dfg~a~~~~~~~~~ 838 (967)
+|+|.+++........+++..++.++.|+++||+|||+ +||+||||||+||+++.++. +||+|||++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~---- 158 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---- 158 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc----
Confidence 99999999876544347899999999999999999999 89999999999999998887 79999999975532
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
......||+.|+|||.+ ....++.++||||||+++|||++|+.||.............+. ...+.
T Consensus 159 -~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-------------~~~~~ 223 (307)
T 2eva_A 159 -HMTNNKGSAAWMAPEVF-EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-------------NGTRP 223 (307)
T ss_dssp -------CCTTSSCHHHH-TCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH-------------TTCCC
T ss_pred -ccccCCCCCceEChhhh-CCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh-------------cCCCC
Confidence 12244689999999998 5667899999999999999999999999754433221111111 11122
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
..+...+..+.+++.+|++.||++|||++|+++.|+.+.+.+.+
T Consensus 224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 33445667799999999999999999999999999998866544
No 108
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-39 Score=353.39 Aligned_cols=263 Identities=30% Similarity=0.465 Sum_probs=207.2
Q ss_pred ccCCCCccCCCCceEEEEEEeCC-----CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQD-----GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
.|+..+.||+|+||.||+|.... +..||||.+...........+.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 34566889999999999998643 2469999998665445567899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus 125 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999976433 389999999999999999999999999999999999999999999999999987643221
Q ss_pred c-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 838 C-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 838 ~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
. .......+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... ....+. ..
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~-------------~~ 266 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAIN-------------DG 266 (333)
T ss_dssp --------CCCGGGSCHHHH-HSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHH-------------TT
T ss_pred cccccCCCCccccccCchhc-ccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHH-------------CC
Confidence 1 112234457789999988 55678999999999999999999 999996543321 111111 11
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
.+...+...+..+.+++.+|++.||++||++.++++.|+++....+..
T Consensus 267 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 314 (333)
T 1mqb_A 267 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314 (333)
T ss_dssp CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 122335566778999999999999999999999999999987655443
No 109
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.1e-39 Score=347.45 Aligned_cols=262 Identities=27% Similarity=0.413 Sum_probs=212.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|..++++.||||.+.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 3467788999999999999999888899999997654 34678999999999999999999999986 45689999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++++|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+....... ....
T Consensus 90 ~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 167 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAR 167 (279)
T ss_dssp TTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EECC
T ss_pred CCCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cccc
Confidence 999999999753211 38899999999999999999999999999999999999999999999999998765422 2223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... ..... ....+...
T Consensus 168 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~----------~~~~~~~~ 231 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQNL----------ERGYRMVR 231 (279)
T ss_dssp TTCCCCTTTSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHH----------HTTCCCCC
T ss_pred cCCCCccCccChhhh-ccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----HHHHH----------hcccCCCC
Confidence 345567889999988 55678999999999999999999 999997544321 11111 11112233
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
+...+..+.+++.+|++.||++|||++++++.|+++.....++.
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 275 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence 45667789999999999999999999999999999886655543
No 110
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-39 Score=348.15 Aligned_cols=258 Identities=24% Similarity=0.361 Sum_probs=211.7
Q ss_pred CCccCCCCceEEEEEEeC---CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecCC
Q 002094 687 DCELGRGGFGVVYRTILQ---DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFISS 763 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 763 (967)
.+.||+|+||.||+|+.. ++..||||++.........+.+.+|++++++++||||+++++++ ..+..++||||+++
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred hccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 348999999999999854 57889999998765455667899999999999999999999999 45668999999999
Q ss_pred CchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc-cccc
Q 002094 764 GSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC-ILSS 842 (967)
Q Consensus 764 gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~ 842 (967)
++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++......... ....
T Consensus 94 ~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 171 (287)
T 1u59_A 94 GPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171 (287)
T ss_dssp EEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred CCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence 999999975432 3899999999999999999999999999999999999999999999999999876432221 2223
Q ss_pred cccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCC
Q 002094 843 KIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFP 921 (967)
Q Consensus 843 ~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (967)
...+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... ....+ ....+...+
T Consensus 172 ~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i-------------~~~~~~~~~ 235 (287)
T 1u59_A 172 AGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFI-------------EQGKRMECP 235 (287)
T ss_dssp SSCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHH-------------HTTCCCCCC
T ss_pred cccccccccCHHHh-ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH-------------hcCCcCCCC
Confidence 44568899999988 55678999999999999999998 999997554321 11111 111223455
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 922 ADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
...+.++.+++.+|++.||++|||+.++++.|+++..+...+
T Consensus 236 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 667788999999999999999999999999999987654443
No 111
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.2e-39 Score=355.24 Aligned_cols=263 Identities=24% Similarity=0.369 Sum_probs=214.7
Q ss_pred hhccCCCCccCCCCceEEEEEEeC------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 754 (967)
.+.|+..+.||+|+||.||+|+.. +++.||||.+...........+.+|++++++++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 345788899999999999999854 36889999998665445566799999999999999999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 755 LLIYEFISSGSLYKHLHDGS-------SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
++||||+++|+|.+++.... ....+++..+++++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCc
Confidence 99999999999999997532 11237899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccC
Q 002094 828 LARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDG 906 (967)
Q Consensus 828 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (967)
++................+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... .......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~~~~-- 255 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----VLRFVME-- 255 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----HHHHHHT--
T ss_pred cccccccccccccccCCCCCCCccChhhh-ccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----HHHHHHc--
Confidence 99866443322333445678889999988 55678999999999999999999 899997544321 1111111
Q ss_pred CchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 907 RVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
......+...+..+.+++.+|++.||++|||+.|+++.|+++...
T Consensus 256 --------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 256 --------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp --------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred --------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 111223456677899999999999999999999999999987653
No 112
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=378.84 Aligned_cols=262 Identities=29% Similarity=0.418 Sum_probs=216.9
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
+.|+..+.||+|+||.||+|.++++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 3467788999999999999999888899999998654 346789999999999999999999999866 6789999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++|+|.++++..... .+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 344 ~~gsL~~~l~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~ 421 (535)
T 2h8h_A 344 SKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTAR 421 (535)
T ss_dssp TTEEHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-HHHTT
T ss_pred cCCcHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-ceecc
Confidence 999999999753222 2889999999999999999999999999999999999999999999999999866431 11222
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....++..|+|||.+ ....++.++||||||+++|||++ |+.||........ ... +....+...
T Consensus 422 ~~~~~~~~y~aPE~~-~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~-----~~~----------i~~~~~~~~ 485 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAA-LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQ----------VERGYRMPC 485 (535)
T ss_dssp CSTTSCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH-----HHH----------HHTTCCCCC
T ss_pred cCCcCcccccCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHH----------HHcCCCCCC
Confidence 344567889999988 55678999999999999999999 9999975543211 111 111223344
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
+..++..+.++|.+||+.||++|||+++++++|+++....+++.
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~ 529 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 529 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSS
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCccc
Confidence 56777889999999999999999999999999999987766653
No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=346.26 Aligned_cols=264 Identities=27% Similarity=0.359 Sum_probs=211.2
Q ss_pred cCCCCccCCCCceEEEEEEeCC----CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce-eEEE
Q 002094 684 LNKDCELGRGGFGVVYRTILQD----GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ-LLIY 758 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~ 758 (967)
|+..+.||+|+||.||+|...+ +..||+|.+.........+.+.+|++++++++||||+++++++.+++.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 4556889999999999998532 2379999997655445567899999999999999999999999766555 8999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc--
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD-- 836 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~-- 836 (967)
||+.+|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 103 e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 99999999999987433 37899999999999999999999999999999999999999999999999997654322
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.........+++.|+|||.. ....++.++||||+|+++|||++|..|+....... .....+. ...
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~-------------~~~ 245 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESL-QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFLA-------------QGR 245 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHH-TTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHHH-------------TTC
T ss_pred ccccCcCCCCCccccChhhh-ccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHhh-------------cCC
Confidence 11223355678899999998 66678999999999999999999555543222221 1111111 111
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
....+...+..+.+++.+|++.||.+|||++++++.|+++.+++.+.+
T Consensus 246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 223345566789999999999999999999999999999988776554
No 114
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.3e-38 Score=343.91 Aligned_cols=263 Identities=22% Similarity=0.263 Sum_probs=204.9
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
.|+..+.||+|+||+||+|... +++.||||++..... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 3677889999999999999965 689999999976543 23457789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++ ++.+.+..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ...
T Consensus 83 ~~~-~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 157 (292)
T 3o0g_A 83 CDQ-DLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--VRC 157 (292)
T ss_dssp CSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--CSC
T ss_pred CCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--ccc
Confidence 986 55555554322 2899999999999999999999999999999999999999999999999999876432 223
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch------
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA------ 914 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 914 (967)
.....||+.|+|||.+.....++.++||||+|+++|||++|..||............+.... .......+...
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL-GTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH-CCCCTTTCTTGGGSTTC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh-CCCChhhhhhhcccccc
Confidence 34567899999999985555589999999999999999998888654444333333333221 11111110000
Q ss_pred ---------hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 915 ---------RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 915 ---------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..........+..+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0011122345678999999999999999999999875
No 115
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.2e-38 Score=348.04 Aligned_cols=262 Identities=26% Similarity=0.349 Sum_probs=199.9
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcC--CCCCceeeeeeEEEc----CCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGK--IRHHNLVALEGYYWT----PSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~ 755 (967)
+.|+..+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 4578889999999999999988 5899999998653 34455566666554 799999999998654 34578
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLH--------HTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH--------~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
+||||+++|+|.++++.. .+++..+++++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 83 lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 158 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158 (301)
T ss_dssp EEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC
Confidence 999999999999999643 3899999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCcccc--ccccccccccccCcccccCcc-----cCCcccchhhHHHHHHHHHcC----------CCCCCCCcc
Q 002094 828 LARLLPMLDRCI--LSSKIQSALGYMAPEFACRTV-----KITEKCDVYGFGVLVLEVVTG----------KRPVEYMED 890 (967)
Q Consensus 828 ~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----~~t~~~Dv~slGvll~elltg----------~~p~~~~~~ 890 (967)
+++......... ......||+.|+|||.+.... .++.++||||||+++|||++| +.||.....
T Consensus 159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~ 238 (301)
T 3q4u_A 159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238 (301)
T ss_dssp TCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC
Confidence 997654322211 123457899999999884332 455799999999999999999 888864333
Q ss_pred chHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhh
Q 002094 891 DVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELI 956 (967)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~ 956 (967)
.......+.............. ....+...+..+.+++.+|++.||++|||++|+++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 239 NDPSFEDMRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcchhhhhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2222222222111111000000 0012234678899999999999999999999999999986
No 116
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=350.12 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=204.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 34678889999999999999965 58899999987543 4456789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC--CCCeEEeecccccccCCCccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS--SGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 999999999976432 3899999999999999999999999999999999999987 7899999999998764322
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
......||+.|+|||.+ ....++.++||||+|+++|+|++|+.||...... .....+...... .....
T Consensus 159 -~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~-------~~~~~-- 226 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVH-QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYT-------FDEEA-- 226 (321)
T ss_dssp -EEEEEESCGGGSCHHHH-TTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC-------CCHHH--
T ss_pred -ccccccCChhhcCcHHh-cCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHcCCCC-------CChhh--
Confidence 23356789999999998 5557899999999999999999999999754332 222222211110 00000
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....+.++.+++.+|++.||++|||+.|+++
T Consensus 227 --~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 227 --FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp --HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1234567999999999999999999999987
No 117
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2e-39 Score=358.42 Aligned_cols=277 Identities=26% Similarity=0.381 Sum_probs=213.7
Q ss_pred hccCCCCccCCCCceEEEEEEe-----CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEE--cCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-----QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYW--TPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~ 754 (967)
+.|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 3467788999999999999984 368899999997654 344567999999999999999999999887 45568
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 899999999999999976432 289999999999999999999999999999999999999999999999999987654
Q ss_pred Cccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 835 LDRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
.... .......+++.|+|||.+ ....++.++||||+|+++|+|++|+.||.....+..................+...
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred CCccceeeccCCccccccCHHHh-ccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 2222 223345678889999988 55678999999999999999999999986432211100000000000001112223
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
...+...+...+..+.+++.+|++.||++|||++|+++.|+.+.....+
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 3334455677788899999999999999999999999999998765443
No 118
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=360.78 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=205.2
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
.+.|+..+.||+|+||.||+|... +|+.||+|++..... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 345788899999999999999854 689999999976653 234567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC---CCCCeEEeecccccccCCC
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID---SSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~---~~~~~kl~Dfg~a~~~~~~ 835 (967)
||+++|+|.+.+..... +++..+..++.||+.||+|||++||+||||||+||+++ .++.+||+|||++......
T Consensus 90 E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 90 DLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 99999999999987543 89999999999999999999999999999999999998 4678999999999766432
Q ss_pred ccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 836 DRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
. .......||+.|+|||++ ....++.++||||+||++|+|++|++||...... .....+..+...
T Consensus 167 ~--~~~~~~~gt~~Y~APE~l-~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~~~----------- 231 (444)
T 3soa_A 167 Q--QAWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RLYQQIKAGAYD----------- 231 (444)
T ss_dssp C--CBCCCSCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCC-----------
T ss_pred C--ceeecccCCcccCCHHHh-cCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhCCCC-----------
Confidence 2 223456799999999998 5667899999999999999999999999654322 222222211110
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.........+.++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 011112345677999999999999999999999986
No 119
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.3e-39 Score=352.39 Aligned_cols=247 Identities=20% Similarity=0.269 Sum_probs=202.9
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|...+.||+|+||.||+|.. .+++.||||++..... ......+.+|+++++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3468888999999999999996 5789999999975421 123457899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+ +|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--- 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--- 161 (336)
T ss_dssp CCC-CEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS---
T ss_pred ECC-CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC---
Confidence 999 6789998876443 899999999999999999999999999999999999999999999999999866432
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||.+......+.++||||+|+++|+|++|+.||+...... ....+. ....
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---------------~~~~i~-~~~~ 225 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---------------LFKKVN-SCVY 225 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---------------CBCCCC-SSCC
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---------------HHHHHH-cCCC
Confidence 223455689999999998544445789999999999999999999997432210 000000 0112
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+...+..+.+++.+|++.||.+|||++|+++
T Consensus 226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 345566778999999999999999999999976
No 120
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.8e-38 Score=348.81 Aligned_cols=265 Identities=22% Similarity=0.301 Sum_probs=195.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|..+ +|+.||||++.........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 34688899999999999999964 68999999997665444557789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 761 ISSGSLYKHLHDGS---SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 761 ~~~gsL~~~l~~~~---~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
++ |+|.+++.... ....+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV- 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC-
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc-
Confidence 98 59999886532 11238899999999999999999999999999999999999999999999999998664321
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCC---chhhc--
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGR---VEDCV-- 912 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-- 912 (967)
.......+|+.|+|||.+.....++.++||||+||++|||++|+.||...... .....+... ..... .....
T Consensus 163 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 163 -NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDI-MGTPNESLWPSVTKL 239 (317)
T ss_dssp -CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHH-HCSCCTTTCGGGGGC
T ss_pred -ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHH-hCCCChhHhhhhhhh
Confidence 12334568999999999855567899999999999999999999999755432 222222221 11110 00000
Q ss_pred ---------------chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 913 ---------------DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 913 ---------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+....+...+.++.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000011112234567999999999999999999999875
No 121
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=350.74 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=205.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-----ccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-----KSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|... +|+.||||.+...... ...+.+.+|++++++++||||+++++++..+...+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45788899999999999999965 5899999999765421 24678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC----CeEEeecccccc
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG----EPKVGDFGLARL 831 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~----~~kl~Dfg~a~~ 831 (967)
+||||+++++|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++ .+||+|||++..
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999997643 389999999999999999999999999999999999998877 899999999987
Q ss_pred cCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh
Q 002094 832 LPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC 911 (967)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (967)
..... ......||+.|+|||++ ....++.++||||+|+++|+|++|+.||...... .....+...... .
T Consensus 168 ~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~---~--- 236 (326)
T 2y0a_A 168 IDFGN---EFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANVSAVNYE---F--- 236 (326)
T ss_dssp CCTTS---CCCCCCSCTTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCC---C---
T ss_pred CCCCC---ccccccCCcCcCCceee-cCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCC---c---
Confidence 64322 23356789999999998 6667899999999999999999999999654322 111111111000 0
Q ss_pred cchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 912 VDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.. ......+..+.+++.+|++.||++|||++|+++
T Consensus 237 -~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 237 -ED----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -CH----HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -Cc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 011234567899999999999999999999986
No 122
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.2e-38 Score=342.23 Aligned_cols=250 Identities=30% Similarity=0.452 Sum_probs=196.5
Q ss_pred ccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc---cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL---IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|... ++.||||++..... ....+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 4677889999999999999985 89999999875432 2335789999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCCCCEEeCC--------CCCeEEeeccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN---IIHYNLKSTNVLIDS--------SGEPKVGDFGL 828 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~---ivH~Dik~~Nill~~--------~~~~kl~Dfg~ 828 (967)
|+++++|.+++... .+++..++.++.|++.||+|||++| |+||||||+||+++. ++.+||+|||.
T Consensus 87 ~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 87 FARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp CCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred cCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999998643 3889999999999999999999998 899999999999986 67899999999
Q ss_pred ccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc
Q 002094 829 ARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV 908 (967)
Q Consensus 829 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (967)
+...... ......|++.|+|||.+ ....++.++||||+|+++|||++|+.||......... ..
T Consensus 163 ~~~~~~~----~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~----------- 225 (271)
T 3dtc_A 163 AREWHRT----TKMSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA-YG----------- 225 (271)
T ss_dssp -----------------CCGGGSCHHHH-HHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH-HH-----------
T ss_pred ccccccc----cccCCCCccceeCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-Hh-----------
Confidence 9765432 12245689999999988 5667899999999999999999999999755432211 11
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhh
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELI 956 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~ 956 (967)
..........+...+..+.+++.+|++.||++|||++|+++.|+++
T Consensus 226 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 --VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --hhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1111222334566677899999999999999999999999999864
No 123
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.6e-38 Score=354.72 Aligned_cols=335 Identities=17% Similarity=0.179 Sum_probs=191.8
Q ss_pred CCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEe
Q 002094 117 GTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLD 196 (967)
Q Consensus 117 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (967)
++|+.|++++|.++ .+|..+|..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 34444444444444 45555566666666666666666655555666666666666666666655555566666666666
Q ss_pred ecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCC
Q 002094 197 LSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTG 276 (967)
Q Consensus 197 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 276 (967)
|++|.++..++..|.++++|++|++++|++++..+..|+.+++|++|++++|+++ +
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~ 179 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT------------------------H 179 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS------------------------B
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC------------------------c
Confidence 6666665444444455555555555555555444444444444554444444444 2
Q ss_pred cCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhc
Q 002094 277 EVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFK 356 (967)
Q Consensus 277 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 356 (967)
. .+..+++|+.|++++|.+++. ...++|++|++++|+++.. |.
T Consensus 180 ~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-------------------------~~---- 222 (390)
T 3o6n_A 180 V---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-------------------------RG---- 222 (390)
T ss_dssp C---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-------------------------EC----
T ss_pred c---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-------------------------cc----
Confidence 2 123334444444444444321 1112333333333333211 00
Q ss_pred ccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccc
Q 002094 357 MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAI 436 (967)
Q Consensus 357 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 436 (967)
...++|+.|++++|++++. .. +..+++|
T Consensus 223 --------------------------~~~~~L~~L~l~~n~l~~~--~~------------------------l~~l~~L 250 (390)
T 3o6n_A 223 --------------------------PVNVELTILKLQHNNLTDT--AW------------------------LLNYPGL 250 (390)
T ss_dssp --------------------------CCCSSCCEEECCSSCCCCC--GG------------------------GGGCTTC
T ss_pred --------------------------cccccccEEECCCCCCccc--HH------------------------HcCCCCc
Confidence 0113455555555555532 22 3344455
Q ss_pred cEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCC
Q 002094 437 QVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFN 516 (967)
Q Consensus 437 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 516 (967)
++|+|++|++++..|..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N 328 (390)
T 3o6n_A 251 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN 328 (390)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSS
T ss_pred cEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCC
Confidence 555555555555555666666666666666666663 4555567778888888888887 46666778888888888888
Q ss_pred ccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCCCCCCccc
Q 002094 517 DLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCGSVV 571 (967)
Q Consensus 517 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 571 (967)
++++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|.++.
T Consensus 329 ~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 329 SIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTC
T ss_pred cccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccc
Confidence 88754 2 56778888888888888875432 2344555666778888887543
No 124
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.6e-38 Score=339.57 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=209.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|... +++.||||++.........+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 44688899999999999999975 68999999997665445567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++++|.+++.... .+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||.+...........
T Consensus 87 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999987543 389999999999999999999999999999999999999999999999999986643333233
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
.....|++.|+|||.+......+.++||||+|+++|||++|+.||............+..... ....
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~ 230 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------------YLNP 230 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-------------TSTT
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-------------ccCc
Confidence 445678999999999844444578999999999999999999999865544333333322110 0111
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....+..+.+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 2345667899999999999999999999876
No 125
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=354.14 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=201.8
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCC--CceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRH--HNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||++...+++.||||++..... ....+.+.+|++++++++| |||+++++++..+...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 45788899999999999999988899999999976543 2345779999999999976 99999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
| +.+++|.+++..... +++.++..++.||+.||+|||++||+||||||+||+++ ++.+||+|||+++........
T Consensus 89 e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp C-CCSEEHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred e-CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 9 567899999987543 88999999999999999999999999999999999996 678999999999876543333
Q ss_pred cccccccccccccCcccccC----------cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc
Q 002094 839 ILSSKIQSALGYMAPEFACR----------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV 908 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~----------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (967)
.......||+.|+|||++.. ...++.++||||+||++|||++|+.||...........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~------------ 231 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH------------ 231 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH------------
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH------------
Confidence 33446679999999998732 25688999999999999999999999975443322221
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
...+......++...+..+.+++.+|++.||++|||+.|+++.
T Consensus 232 -~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 -AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1222333344555566789999999999999999999999864
No 126
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=360.67 Aligned_cols=274 Identities=20% Similarity=0.236 Sum_probs=217.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC--ceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS--LQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 758 (967)
+.|...+.||+|+||.||+|+.. +|+.||||++.........+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45788899999999999999976 489999999986655556778899999999999999999999998655 679999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe----CCCCCeEEeecccccccCC
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI----DSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill----~~~~~~kl~Dfg~a~~~~~ 834 (967)
||+++|+|.+++........+++..++.++.||+.||+|||++||+||||||+||++ +.++.+||+|||+++....
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999999999875544458999999999999999999999999999999999999 7777899999999987643
Q ss_pred CccccccccccccccccCcccccC-------cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCC
Q 002094 835 LDRCILSSKIQSALGYMAPEFACR-------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGR 907 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (967)
. .......||+.|+|||++.. ...++.++||||||+++|||++|+.||......... .+.+........
T Consensus 169 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~~~~p 244 (396)
T 4eut_A 169 D---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKIITGKP 244 (396)
T ss_dssp G---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHHHSCC
T ss_pred C---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHhcCCC
Confidence 2 22335668999999998732 156788999999999999999999999743322111 112222221111
Q ss_pred c---hhhc-----------chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 908 V---EDCV-----------DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 908 ~---~~~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
. .... +.......+...+..+.+++.+|++.||++|||++|+++.++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 0000 00111233467788899999999999999999999999999988754
No 127
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.9e-39 Score=353.92 Aligned_cols=251 Identities=20% Similarity=0.316 Sum_probs=200.1
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC---------
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS--------- 752 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 752 (967)
.|+..+.||+|+||.||+|+.+ +|+.||||++.........+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 4678899999999999999976 799999999987665556788999999999999999999999986543
Q ss_pred ------------------------------------------------ceeEEEEecCCCchhhhhhcCCCCCCCCHHHH
Q 002094 753 ------------------------------------------------LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQR 784 (967)
Q Consensus 753 ------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~ 784 (967)
..++||||+++++|.+++.........++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 27899999999999999988766555778889
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc----------cccccccccccccCcc
Q 002094 785 FNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC----------ILSSKIQSALGYMAPE 854 (967)
Q Consensus 785 ~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~gt~~y~aPE 854 (967)
+.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++........ .......||+.|+|||
T Consensus 167 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 999999999999999999999999999999999999999999999876543211 1233456899999999
Q ss_pred cccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHh
Q 002094 855 FACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLI 934 (967)
Q Consensus 855 ~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 934 (967)
.+ ....++.++||||+|+++|||++|..|+.. .. ...... ...... ......+..+.+++.+
T Consensus 247 ~~-~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~---~~~~~~-~~~~~~---------~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 247 QI-HGNNYSHKVDIFSLGLILFELLYSFSTQME----RV---RIITDV-RNLKFP---------LLFTQKYPQEHMMVQD 308 (332)
T ss_dssp HH-HCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HH---HHHHHH-HTTCCC---------HHHHHHCHHHHHHHHH
T ss_pred Hh-cCCCCcchhhHHHHHHHHHHHHHcCCChhH----HH---HHHHHh-hccCCC---------cccccCChhHHHHHHH
Confidence 98 556789999999999999999998877521 01 111111 000000 0112334567899999
Q ss_pred hccCCCCCCCCHHHHHH
Q 002094 935 CASQVPSNRPDMEEVVN 951 (967)
Q Consensus 935 cl~~dP~~Rpt~~evl~ 951 (967)
|++.||++|||++|+++
T Consensus 309 ~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHCSSGGGSCCHHHHHH
T ss_pred HccCCCCcCCCHHHHhh
Confidence 99999999999999876
No 128
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=378.76 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=205.9
Q ss_pred ccCCCCceEEEEEEeC---CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecCCCc
Q 002094 689 ELGRGGFGVVYRTILQ---DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFISSGS 765 (967)
Q Consensus 689 ~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 765 (967)
.||+|+||.||+|.++ ++..||||+++........+++.+|++++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 4678999999876545567889999999999999999999999976 56899999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc-cccccc
Q 002094 766 LYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC-ILSSKI 844 (967)
Q Consensus 766 L~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~ 844 (967)
|.+++..... .+++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++........ ......
T Consensus 422 L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999976432 3899999999999999999999999999999999999999999999999999876432221 112233
Q ss_pred cccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChh
Q 002094 845 QSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPAD 923 (967)
Q Consensus 845 ~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (967)
.+++.|+|||++ ....++.++|||||||++|||++ |+.||........ .+ .+....+...+..
T Consensus 500 ~~~~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~-------------~i~~~~~~~~p~~ 563 (613)
T 2ozo_A 500 KWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MA-------------FIEQGKRMECPPE 563 (613)
T ss_dssp --CCTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--HH-------------HHHTTCCCCCCTT
T ss_pred CCccceeCHhhh-cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HH-------------HHHcCCCCCCCCc
Confidence 456789999998 56689999999999999999998 9999986554321 11 1112223445677
Q ss_pred hHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 924 EAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 924 ~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
++.++.++|.+||+.||++|||+.++++.|+.+....
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999999875433
No 129
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.2e-38 Score=343.16 Aligned_cols=265 Identities=14% Similarity=0.144 Sum_probs=212.4
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +|++++++++++......++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 4478888999999999999995 578999999987544 234588899999999 79999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC-----eEEeecccccccCC
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE-----PKVGDFGLARLLPM 834 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~-----~kl~Dfg~a~~~~~ 834 (967)
|+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+||+++.++. +||+|||++.....
T Consensus 87 ~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred ec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 99 9999999986533 3899999999999999999999999999999999999987776 99999999987654
Q ss_pred Cccc-----cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccc--hHhHHHHHHhhhccCC
Q 002094 835 LDRC-----ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDD--VVVLCDMVRGALEDGR 907 (967)
Q Consensus 835 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~ 907 (967)
.... .......||+.|+|||.+ ....++.++||||+|+++|||++|+.||...... ......+...... ..
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 241 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTH-LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS-TP 241 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-SC
T ss_pred ccccccccccCccCCCCCcccCCchhh-cCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-cc
Confidence 2221 123456789999999998 6667899999999999999999999999854321 1111211111111 00
Q ss_pred chhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 908 VEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
. .. .....+.++.+++.+|++.||++|||++++++.|+++.+.....
T Consensus 242 ~-----~~----~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 242 L-----RE----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp H-----HH----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred H-----HH----HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 0 01 12245567999999999999999999999999999988665443
No 130
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=352.82 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=205.8
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+++++.++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 34688899999999999999965 588999999975432 234578899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+.||+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT---
T ss_pred ecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC---
Confidence 99999999999986543 899999999999999999999999999999999999999999999999999876432
Q ss_pred cccccccccccccCcccccC--cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 839 ILSSKIQSALGYMAPEFACR--TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~--~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......||+.|+|||++.. ...++.++||||+||++|||++|+.||........ .+...... ..
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~-----------~~ 235 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFE-----------TT 235 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHH-----------HC
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHh-----------hc
Confidence 23345679999999999843 34588999999999999999999999974322111 11111110 01
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCC-HHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPD-MEEVVN 951 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~evl~ 951 (967)
...++...+..+.+++.+|++.||++||+ ++++.+
T Consensus 236 ~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 22345666778999999999999999998 666543
No 131
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=345.46 Aligned_cols=250 Identities=26% Similarity=0.311 Sum_probs=195.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-------------------------ccHHHHHHHHHHHcC
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-------------------------KSQEDFEKEMKTLGK 735 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-------------------------~~~~~~~~E~~~l~~ 735 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 34688889999999999999964 6889999999754321 113568999999999
Q ss_pred CCCCceeeeeeEEEc--CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCE
Q 002094 736 IRHHNLVALEGYYWT--PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNV 813 (967)
Q Consensus 736 l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Ni 813 (967)
++||||+++++++.+ .+..++||||+++++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 999999999999986 5678999999999999887543 2389999999999999999999999999999999999
Q ss_pred EeCCCCCeEEeecccccccCCCccccccccccccccccCcccccCccc--CCcccchhhHHHHHHHHHcCCCCCCCCccc
Q 002094 814 LIDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVK--ITEKCDVYGFGVLVLEVVTGKRPVEYMEDD 891 (967)
Q Consensus 814 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~t~~~Dv~slGvll~elltg~~p~~~~~~~ 891 (967)
+++.++.+||+|||++....... .......||+.|+|||.+..... .+.++||||+|+++|||++|+.||......
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 99999999999999998764322 22345678999999999843322 478899999999999999999999644321
Q ss_pred hHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 892 VVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. ....+. . ...........+..+.+++.+|++.||++|||++|+++
T Consensus 247 -~-~~~~~~---~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 247 -C-LHSKIK---S---------QALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -H-HHHHHH---H---------CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -H-HHHHHh---c---------ccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 111111 0 01111112345677999999999999999999999864
No 132
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=355.12 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=198.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ +++.||||++..... ....+.+.+|.++++.+ +||||+++++++.+++..++|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 45688899999999999999965 589999999976431 23456788999999988 799999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.... .
T Consensus 103 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~--~ 177 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--N 177 (353)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred EeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc--C
Confidence 999999999999976543 89999999999999999999999999999999999999999999999999975432 2
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ ....++.++||||+||++|||++|+.||...... .....+... .
T Consensus 178 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~---------------~ 240 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEIL-QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAILND---------------E 240 (353)
T ss_dssp --------CCGGGCCHHHH-HHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC---------------C
T ss_pred CccccccCCCcCeEChhhc-CCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-HHHHHHHcC---------------C
Confidence 2233456799999999988 5667899999999999999999999999754432 112211111 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
..++...+..+.+++.+|++.||++||++
T Consensus 241 ~~~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 241 VVYPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CCCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 23455566779999999999999999998
No 133
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-38 Score=348.76 Aligned_cols=263 Identities=24% Similarity=0.333 Sum_probs=200.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC----CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc---
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ----DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL--- 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 753 (967)
+.|...+.||+|+||.||+|... .+..||||++..... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 45678889999999999999854 345899999976543 3345679999999999999999999999987553
Q ss_pred --eeEEEEecCCCchhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccc
Q 002094 754 --QLLIYEFISSGSLYKHLHDGS---SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGL 828 (967)
Q Consensus 754 --~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~ 828 (967)
.++||||+++++|.+++.... ....+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCc
Confidence 489999999999999985432 223489999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCC
Q 002094 829 ARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGR 907 (967)
Q Consensus 829 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (967)
+................+++.|+|||.+ ....++.++||||||+++|||++ |+.||........ ...+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~~------- 263 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YDYLL------- 263 (313)
T ss_dssp C----------------CCGGGSCHHHH-HSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHH-------
T ss_pred ceecccccccCcccccCCCccccCchhh-cCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHHH-------
Confidence 9876543333334455678899999998 56678999999999999999999 9999975443211 11111
Q ss_pred chhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 908 VEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
...+...+...+..+.+++.+|++.||++|||+.++++.|+++.+.+
T Consensus 264 ------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 264 ------HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp ------TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ------cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11122345566778999999999999999999999999999987654
No 134
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3e-38 Score=345.84 Aligned_cols=244 Identities=25% Similarity=0.348 Sum_probs=205.1
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|+.+ +|+.||+|++..... ....+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e 86 (318)
T 1fot_A 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86 (318)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence 4678889999999999999965 689999999976432 2345778899999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----- 158 (318)
T 1fot_A 87 YIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----- 158 (318)
T ss_dssp CCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS-----
T ss_pred CCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC-----
Confidence 9999999999986543 88999999999999999999999999999999999999999999999999986543
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......||+.|+|||.+ ....++.++|+||+|+++|||++|+.||...... .....+... ...
T Consensus 159 ~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~---------------~~~ 221 (318)
T 1fot_A 159 VTYTLCGTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEKILNA---------------ELR 221 (318)
T ss_dssp CBCCCCSCTTTCCHHHH-TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHC---------------CCC
T ss_pred ccccccCCccccCHhHh-cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC---------------CCC
Confidence 12345789999999998 5667899999999999999999999999654322 111111111 112
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRP-----DMEEVVN 951 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 951 (967)
++...+.++.+++.+|++.||++|| +++|+++
T Consensus 222 ~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 4555667899999999999999999 8888874
No 135
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.6e-38 Score=353.28 Aligned_cols=252 Identities=22% Similarity=0.345 Sum_probs=205.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|..+ +|+.||+|++..... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45788899999999999999965 689999999976543 2345678999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC---CCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS---GEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~---~~~kl~Dfg~a~~~~~~~ 836 (967)
|+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.+ +.+||+|||++......
T Consensus 109 ~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~- 184 (362)
T 2bdw_A 109 LVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS- 184 (362)
T ss_dssp CCCSCBHHHHHTTCSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC-
T ss_pred cCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC-
Confidence 9999999999876543 8999999999999999999999999999999999999865 45999999999866432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......||+.|+|||++ ....++.++||||+||++|+|++|+.||...... .....+..+... .
T Consensus 185 --~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~-----------~ 249 (362)
T 2bdw_A 185 --EAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYD-----------Y 249 (362)
T ss_dssp --CSCCCSCSCTTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC-----------C
T ss_pred --cccccCCCCccccCHHHH-ccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCC-----------C
Confidence 223356789999999998 5667899999999999999999999999654322 111111111110 0
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
........+.++.+++.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 011123456779999999999999999999998754
No 136
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-38 Score=343.90 Aligned_cols=257 Identities=26% Similarity=0.351 Sum_probs=207.0
Q ss_pred hccCCCCccCCCCceEEEEEEeCC----CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD----GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|...+.||+|+||.||+|+..+ +..||||.+.........+.+.+|++++++++||||+++++++.+ +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 346788899999999999998542 346999999876545567889999999999999999999999864 457899
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 91 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 167 (281)
T 3cc6_A 91 MELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED- 167 (281)
T ss_dssp EECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccc-
Confidence 999999999999976432 38899999999999999999999999999999999999999999999999998664322
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
........+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ...+. ...
T Consensus 168 ~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--~~~~~-------------~~~ 231 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--IGVLE-------------KGD 231 (281)
T ss_dssp -----CCCCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--HHHHH-------------HTC
T ss_pred ccccccCCCCcceeCchhh-ccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--HHHHh-------------cCC
Confidence 2223345577889999988 56678999999999999999998 9999975443221 11111 111
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
....+...+..+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 223345566789999999999999999999999999998764
No 137
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=352.24 Aligned_cols=249 Identities=22% Similarity=0.378 Sum_probs=190.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++..++..++||||
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 45788899999999999999976 57899999997643 346788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecccccccCCCcc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg~a~~~~~~~~ 837 (967)
+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~--- 203 (349)
T 2w4o_A 130 VTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--- 203 (349)
T ss_dssp CCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc---
Confidence 999999999976443 899999999999999999999999999999999999975 88999999999986542
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ .+..++.++|||||||++|||++|+.||............+..... ...
T Consensus 204 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-----------~~~ 271 (349)
T 2w4o_A 204 QVLMKTVCGTPGYCAPEIL-RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-----------YFI 271 (349)
T ss_dssp ---------CGGGSCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-----------CCC
T ss_pred ccccccccCCCCccCHHHh-cCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-----------ccC
Confidence 1223356789999999998 5667899999999999999999999999755443322222221110 011
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+.....+.++.+++.+|++.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1223455677999999999999999999999886
No 138
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-38 Score=355.53 Aligned_cols=249 Identities=21% Similarity=0.284 Sum_probs=200.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ +++.||||+++.... ....+.+.+|..++.++ +|||||++++++.+++..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 34688899999999999999966 578999999976532 22234688899998877 899999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|..++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.... .
T Consensus 132 ~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~--~ 206 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--P 206 (396)
T ss_dssp EECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC--T
T ss_pred EEcCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc--C
Confidence 999999999999986543 89999999999999999999999999999999999999999999999999975322 1
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccch---HhHHHHHHhhhccCCchhhcch
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDV---VVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
........||+.|+|||++ ....++.++||||+||++|||++|+.||....... ....+.+...+..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l-~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--------- 276 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--------- 276 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH---------
T ss_pred CCccccccCCcccCCchhh-cCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc---------
Confidence 2234456799999999998 56678999999999999999999999996432111 0001111111111
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
....+|...+.++.+++.+|++.||++||++
T Consensus 277 -~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 277 -KQIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -cccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1223566677889999999999999999996
No 139
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-37 Score=358.33 Aligned_cols=356 Identities=19% Similarity=0.229 Sum_probs=302.6
Q ss_pred CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceE
Q 002094 68 TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREV 147 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L 147 (967)
-.+++.|++.++.+++. | .+..+++|++|+|++|++++. | ++.+++|++|+|++|++++ +| ++.+++|++|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~---~~~l~~L~~L 111 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD---VTPLTKLTYL 111 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC---CTTCTTCCEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee---cCCCCcCCEE
Confidence 35789999999999985 4 799999999999999999985 3 9999999999999999996 44 6899999999
Q ss_pred eccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCcccc
Q 002094 148 SFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFS 227 (967)
Q Consensus 148 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 227 (967)
+|++|++++. | ++.+++|++|++++|++++. + ++.+++|++|++++|...+.+ .+..+++|++|++++|+++
T Consensus 112 ~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 112 NCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp ECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccc
Confidence 9999999974 4 89999999999999999974 3 889999999999999655555 5889999999999999999
Q ss_pred ccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCC
Q 002094 228 GQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIG 307 (967)
Q Consensus 228 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 307 (967)
+ +| ++.+++|++|++++|++++. .+..+++|+.|++++|++++ +| +..+++|++|++++|++++.. ++
T Consensus 184 ~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~ 251 (457)
T 3bz5_A 184 E-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VS 251 (457)
T ss_dssp C-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CT
T ss_pred e-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HH
Confidence 7 44 88999999999999999975 48899999999999999997 45 889999999999999999753 56
Q ss_pred cccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCC
Q 002094 308 NLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQG 387 (967)
Q Consensus 308 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~ 387 (967)
.+++|+.|++++|+ |+.|++++|++.+.+|. ..+++
T Consensus 252 ~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~~------------------------------~~l~~ 287 (457)
T 3bz5_A 252 TLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQA------------------------------EGCRK 287 (457)
T ss_dssp TCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEEC------------------------------TTCTT
T ss_pred HCCCCCEEeccCCC--------------CCEEECCCCccCCcccc------------------------------ccccc
Confidence 78889999988764 56788899987765541 13467
Q ss_pred ccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCC
Q 002094 388 LQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEK 467 (967)
Q Consensus 388 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 467 (967)
|+.|++++|...+.+|. ..++|+.|++++| ++|++|++++|++++. .++.+++|+.|++++
T Consensus 288 L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~ 348 (457)
T 3bz5_A 288 IKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVN 348 (457)
T ss_dssp CCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCS
T ss_pred CCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECCC
Confidence 88888888887777764 3456677776665 5789999999999974 388999999999999
Q ss_pred CCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhh
Q 002094 468 NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELIN 528 (967)
Q Consensus 468 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 528 (967)
|+|++ ++.|..|++++|.++|. +.+..|..+++++|+++|.+|..+..
T Consensus 349 N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 349 AHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp SCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred CCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 99985 35678889999999975 46778899999999999999976543
No 140
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.6e-38 Score=355.93 Aligned_cols=253 Identities=22% Similarity=0.339 Sum_probs=202.1
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCC--CCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIR--HHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 758 (967)
..|+..+.||+|+||.||++...+++.||||++..... ....+.+.+|++++++++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 34788899999999999999988899999999976543 334578999999999996 599999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
| +.+++|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++ ++.+||+|||+++........
T Consensus 136 E-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 567899999987543 88999999999999999999999999999999999995 589999999999876543333
Q ss_pred cccccccccccccCcccccC----------cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc
Q 002094 839 ILSSKIQSALGYMAPEFACR----------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV 908 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~----------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (967)
.......||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+..
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~----------- 279 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA----------- 279 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH-----------
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH-----------
Confidence 33445679999999998743 236889999999999999999999999754332222211
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..+......++...+.++.+++.+|++.||++|||++|+++.
T Consensus 280 --~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 --IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 122222333444556779999999999999999999999864
No 141
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.1e-38 Score=355.48 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=208.0
Q ss_pred hccCCCCccCCCCceEEEEEEeCC------CcEEEEEEeecCCccc----------cHHHHHHHHHHHcCCCCCceeeee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD------GRSVAIKKLTVSGLIK----------SQEDFEKEMKTLGKIRHHNLVALE 745 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~ 745 (967)
+.|+..+.||+|+||.||+|..+. ++.||||++....... ....+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 457888999999999999999764 4789999987654210 012344566678888999999999
Q ss_pred eEEEcC----CceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC--CCC
Q 002094 746 GYYWTP----SLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID--SSG 819 (967)
Q Consensus 746 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~--~~~ 819 (967)
+++... ...++||||+ +++|.+++..... .+++..++.++.||+.||+|||++||+||||||+||+++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence 998764 4479999999 9999999987432 389999999999999999999999999999999999998 889
Q ss_pred CeEEeecccccccCCCcccc-----ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHh
Q 002094 820 EPKVGDFGLARLLPMLDRCI-----LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVV 894 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 894 (967)
.+||+|||+++.+....... ......||+.|+|||.+ ....++.++|||||||++|||++|+.||.....+...
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~ 270 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH-NGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY 270 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh-CCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence 99999999998764322111 11344599999999998 5667899999999999999999999999853332221
Q ss_pred HHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 895 LCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
......... ..+.+..+..+. ....+.++.+++..|++.||++||++++++++|+++.+....
T Consensus 271 -~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 271 -VRDSKIRYR-ENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp -HHHHHHHHH-HCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHhh-hhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 111111111 122333333221 234566799999999999999999999999999988765443
No 142
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.1e-38 Score=349.46 Aligned_cols=244 Identities=23% Similarity=0.305 Sum_probs=205.3
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|+.+ +|+.||||++..... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 4678889999999999999965 689999999975432 2345788999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 122 ~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---- 194 (350)
T 1rdq_E 122 YVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194 (350)
T ss_dssp CCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----
T ss_pred CCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC----
Confidence 9999999999986543 899999999999999999999999999999999999999999999999999866431
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
.....||+.|+|||.+ ....++.++||||+||++|||++|+.||...... .....+..+ ...
T Consensus 195 -~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~---------------~~~ 256 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVSG---------------KVR 256 (350)
T ss_dssp -BCCCEECGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC---------------CCC
T ss_pred -cccccCCccccCHHHh-cCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHcC---------------CCC
Confidence 2345789999999998 5567899999999999999999999999754322 212222211 122
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPD-----MEEVVN 951 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 951 (967)
++...+.++.+++.+|++.||++||+ ++|+++
T Consensus 257 ~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 45566778999999999999999998 777764
No 143
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2e-38 Score=350.47 Aligned_cols=262 Identities=24% Similarity=0.369 Sum_probs=209.1
Q ss_pred hhccCCCCccCCCCceEEEEEEe------CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL------QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 754 (967)
.+.|+..+.||+|+||.||+|.. .+++.||||.+..........++.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 44578889999999999999983 357789999997655455667899999999999999999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCC----CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecc
Q 002094 755 LLIYEFISSGSLYKHLHDGSSR----NCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFG 827 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg 827 (967)
++||||+++++|.+++...... ..+++..++.++.|++.||+|||++||+||||||+||+++. +..+||+|||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc
Confidence 9999999999999999865422 24889999999999999999999999999999999999984 4469999999
Q ss_pred cccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccC
Q 002094 828 LARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDG 906 (967)
Q Consensus 828 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (967)
++................+++.|+|||.+ ....++.++||||||+++|||++ |+.||....... ..+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~------ 259 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAF-MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVT------ 259 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHH------
T ss_pred cccccccccccccCCCcCCCcceeCHhHh-cCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HHHHHh------
Confidence 99765433333334456678899999988 55678999999999999999998 999997543321 111111
Q ss_pred CchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 907 RVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.......+...+..+.+++.+|++.||++|||+.++++.|+.+..
T Consensus 260 -------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 260 -------SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp -------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 111223345667789999999999999999999999999988764
No 144
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.8e-38 Score=353.09 Aligned_cols=253 Identities=22% Similarity=0.286 Sum_probs=193.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 45788899999999999999966 78999999997654 2346789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC--eEEeecccccccCCCccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE--PKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~--~kl~Dfg~a~~~~~~~~~ 838 (967)
+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++. +||+|||+++.... .
T Consensus 98 ~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~---~ 171 (361)
T 3uc3_A 98 ASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL---H 171 (361)
T ss_dssp CCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc---c
Confidence 999999999976443 899999999999999999999999999999999999987665 99999999874322 1
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||.+......+.++||||+||++|||++|+.||....... .....+..... .....
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~---------~~~~~ 241 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILS---------VKYSI 241 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHT---------TCCCC
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhc---------CCCCC
Confidence 223355689999999998444334455999999999999999999997543321 11122221111 11111
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
......+..+.+++.+|++.||++|||++|+++.
T Consensus 242 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1122346779999999999999999999999864
No 145
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.8e-38 Score=348.19 Aligned_cols=260 Identities=25% Similarity=0.372 Sum_probs=208.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcE--EEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRS--VAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.. ++.. ||||.+.........+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 44688889999999999999954 4554 4999987654445567799999999999 899999999999999999999
Q ss_pred EEecCCCchhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEe
Q 002094 758 YEFISSGSLYKHLHDGS-------------SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVG 824 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~ 824 (967)
|||+++++|.+++.... ....+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence 99999999999998653 12348999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhh
Q 002094 825 DFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGAL 903 (967)
Q Consensus 825 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (967)
|||+++.... ........+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... .....
T Consensus 185 Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~- 254 (327)
T 1fvr_A 185 DFGLSRGQEV---YVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----LYEKL- 254 (327)
T ss_dssp CTTCEESSCE---ECCC----CCTTTCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHG-
T ss_pred ccCcCccccc---cccccCCCCCccccChhhh-ccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-----HHHHh-
Confidence 9999874322 2223344567889999988 55678999999999999999998 999997544321 11111
Q ss_pred ccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 904 EDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
....+...+...+..+.+++.+|++.||++|||++|+++.|+++....
T Consensus 255 ---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 ---------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp ---------GGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ---------hcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 111223345566788999999999999999999999999999887544
No 146
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.7e-38 Score=344.48 Aligned_cols=255 Identities=21% Similarity=0.361 Sum_probs=204.1
Q ss_pred hccCCCCccCCCCceEEEEEEeCC-C-------cEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD-G-------RSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 753 (967)
+.|...+.||+|+||.||+|+... + ..||+|++.... ....+.+.+|++++++++||||+++++++.+++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 456778899999999999998553 3 579999986544 3456789999999999999999999999999999
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC--------eEEee
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE--------PKVGD 825 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~--------~kl~D 825 (967)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++. +||+|
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred CEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999986533 3889999999999999999999999999999999999988876 99999
Q ss_pred cccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCC-CCCCCCccchHhHHHHHHhhhc
Q 002094 826 FGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGK-RPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 826 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~-~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
||.+..... .....+++.|+|||.+.....++.++||||+|+++|||++|. +||...... . .......
T Consensus 165 fg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~-~~~~~~~--- 233 (289)
T 4fvq_A 165 PGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-R-KLQFYED--- 233 (289)
T ss_dssp CCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-H-HHHHHHT---
T ss_pred CcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-H-HHHHhhc---
Confidence 999875432 223457888999999855477899999999999999999955 454433221 1 1111110
Q ss_pred cCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 905 DGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
....+...+.++.+++.+|++.||++|||++|+++.|+++..+-..
T Consensus 234 ------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 234 ------------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp ------------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred ------------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 1122333455688999999999999999999999999999876543
No 147
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.8e-38 Score=346.52 Aligned_cols=260 Identities=14% Similarity=0.137 Sum_probs=207.8
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 3467888999999999999995 5789999999876542 23588999999999 99999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC-----eEEeecccccccCC
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE-----PKVGDFGLARLLPM 834 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~-----~kl~Dfg~a~~~~~ 834 (967)
|+ +++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++. +||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred eC-CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 99 9999999986522 3899999999999999999999999999999999999998887 99999999987643
Q ss_pred Ccccc-----ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccch--HhHHHHHHhhhccCC
Q 002094 835 LDRCI-----LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDV--VVLCDMVRGALEDGR 907 (967)
Q Consensus 835 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~ 907 (967)
..... ......||+.|+|||.+ .+..++.++||||||+++|||++|+.||....... .....+........
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTH-LGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP- 240 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC-
T ss_pred CCCCccccccccCCcCCCccccChHHH-cCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC-
Confidence 22211 12456799999999998 56678999999999999999999999998543221 11111111111000
Q ss_pred chhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 908 VEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
... .....+ ++.+++.+|++.||.+||+++++.+.|+++.+.
T Consensus 241 -----~~~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 241 -----IEV----LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp -----HHH----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----HHH----HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 000 012234 799999999999999999999999999987644
No 148
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.6e-38 Score=351.20 Aligned_cols=254 Identities=23% Similarity=0.338 Sum_probs=203.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc----cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL----IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLL 756 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 756 (967)
+.|+..+.||+|+||.||+|..+ +++.||||++..... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45788899999999999999965 689999999864321 2246789999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC---eEEeeccccccc
Q 002094 757 IYEFISSGSLYKHLHDGS-SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE---PKVGDFGLARLL 832 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~---~kl~Dfg~a~~~ 832 (967)
||||+++++|.+++.... ....+++..+..++.||+.||+|||++||+||||||+||+++.++. +||+|||++...
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999999988876432 2223789999999999999999999999999999999999986654 999999999876
Q ss_pred CCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhc
Q 002094 833 PMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV 912 (967)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (967)
... ........||+.|+|||++ ....++.++||||+||++|||++|+.||..... .....+...... .
T Consensus 184 ~~~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~-------~ 251 (351)
T 3c0i_A 184 GES--GLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYK-------M 251 (351)
T ss_dssp CTT--SCBCCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCC-------C
T ss_pred cCC--CeeecCCcCCcCccCHHHH-cCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCC-------C
Confidence 532 1223456799999999998 556789999999999999999999999975321 112222211100 0
Q ss_pred chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 913 DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.... ....+.++.+++.+|++.||++|||+.|+++
T Consensus 252 ~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Cccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 1234567999999999999999999999975
No 149
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8e-38 Score=351.30 Aligned_cols=251 Identities=21% Similarity=0.317 Sum_probs=205.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+....++||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 45788899999999999999965 68999999997654 23456799999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC--CCCeEEeecccccccCCCccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS--SGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
+++|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||++.......
T Consensus 130 ~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-- 205 (387)
T ss_dssp CCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--
T ss_pred CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc--
Confidence 999999999976432 3899999999999999999999999999999999999974 5789999999998764322
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
......||+.|+|||++ ....++.++||||+||++|||++|+.||...... .....+..... ....
T Consensus 206 -~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~-----------~~~~ 271 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDW-----------EFDE 271 (387)
T ss_dssp -CEEEECSSGGGCCHHHH-TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCC-----------CCCS
T ss_pred -ceeeeccCCCccCchhc-cCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC-----------CCCc
Confidence 22345689999999998 5667899999999999999999999999754332 11211111100 0111
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
......+.++.+++.+|++.||++|||++|+++
T Consensus 272 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 223345677999999999999999999999986
No 150
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.3e-38 Score=336.42 Aligned_cols=246 Identities=20% Similarity=0.278 Sum_probs=182.6
Q ss_pred ccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence 478899999999999999985 4689999999976542 2345689999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+ ++++.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+...... .
T Consensus 94 ~~-~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~ 166 (275)
T 2eue_A 94 YA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---N 166 (275)
T ss_dssp CC-CEEHHHHHHTSSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred hc-CCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc---c
Confidence 99 6688888876543 899999999999999999999999999999999999999999999999999765432 2
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......||+.|+|||.+......+.++||||+|+++|||++|+.||....... ....+.. ....
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~---------------~~~~ 230 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISN---------------GVYT 230 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH---------------TCCC
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh---------------CCCC
Confidence 23345689999999998544445789999999999999999999997543221 1111111 0123
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+...+..+.+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 231 LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 45556677999999999999999999999875
No 151
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.3e-38 Score=347.01 Aligned_cols=248 Identities=22% Similarity=0.283 Sum_probs=200.5
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 758 (967)
.|+..+.||+|+||.||+|+.+ +++.||+|++..... ....+.+.+|..+++++ +||||+++++++.+++..++||
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 3677889999999999999965 588999999976542 23356788999999887 8999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... .
T Consensus 90 e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~--~ 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--G 164 (345)
T ss_dssp CCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT--T
T ss_pred eCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCC--C
Confidence 99999999999976443 899999999999999999999999999999999999999999999999999754321 1
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchH---hHHHHHHhhhccCCchhhcchh
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVV---VLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.......||+.|+|||.+ ....++.++||||+||++|||++|+.||........ .....+...+..
T Consensus 165 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~---------- 233 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEIL-RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---------- 233 (345)
T ss_dssp CCBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH----------
T ss_pred CcccccCCCccccCcccc-CCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc----------
Confidence 223456799999999998 556789999999999999999999999964221100 000111111111
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
....++...+.++.+++.+|++.||++||++
T Consensus 234 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 234 KQIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1223456667789999999999999999996
No 152
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6e-38 Score=355.30 Aligned_cols=269 Identities=16% Similarity=0.254 Sum_probs=204.9
Q ss_pred hccCCCCccCCC--CceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRG--GFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+| +||.||+|+.. +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 457888999999 99999999976 699999999976543 23456788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.+++....... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.+........
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDG-MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEccCCCCHHHHHhhhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999998754333 89999999999999999999999999999999999999999999999998865422111
Q ss_pred -----ccccccccccccccCcccccCc-ccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhcc----C-
Q 002094 838 -----CILSSKIQSALGYMAPEFACRT-VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALED----G- 906 (967)
Q Consensus 838 -----~~~~~~~~gt~~y~aPE~~~~~-~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~- 906 (967)
........||+.|+|||.+... ..++.++||||+||++|||++|+.||........... ...+.... .
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-KLNGTVPCLLDTST 262 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH-C-------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HhcCCCCccccccc
Confidence 1112234688899999998443 5789999999999999999999999975443322211 11110000 0
Q ss_pred -----------------Cchhhcc---------hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 907 -----------------RVEDCVD---------ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 907 -----------------~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
...+... ......++...+..+.+++.+|++.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000 000111234456679999999999999999999999853
No 153
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.3e-38 Score=340.89 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=205.0
Q ss_pred ccCCCC-ccCCCCceEEEEEEe---CCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 683 LLNKDC-ELGRGGFGVVYRTIL---QDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 683 ~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
.|+..+ .||+|+||.||+|.. .+++.||||++..... ....+++.+|++++++++||||+++++++ ..+..++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 345555 899999999999964 3468899999976543 23357899999999999999999999999 56678999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus 96 ~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp EECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred EEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 999999999999987543 88999999999999999999999999999999999999999999999999987644222
Q ss_pred c-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 838 C-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 838 ~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
. .......+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... ....+ ...
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~-------------~~~ 236 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAML-------------EKG 236 (291)
T ss_dssp EEEC----CCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH-------------HTT
T ss_pred cccccccCCCCceeeChHHh-ccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH-------------HcC
Confidence 1 112234467889999988 55678899999999999999999 999997554321 11111 111
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.+...+...+..+.+++.+|++.||++|||+.++++.|+++..
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 237 ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1233456677889999999999999999999999999998753
No 154
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.2e-38 Score=360.38 Aligned_cols=253 Identities=19% Similarity=0.229 Sum_probs=204.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCC-CcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD-GRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||+||+|+.+. ++.||||++..... ......+.+|..++..++||||+++++++.+++..++||
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 456888999999999999999764 78999999975321 112334889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 154 Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~-~~ 230 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED-GT 230 (437)
T ss_dssp CCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-SC
T ss_pred ecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC-CC
Confidence 99999999999987432 3899999999999999999999999999999999999999999999999999766432 22
Q ss_pred cccccccccccccCccccc----CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 839 ILSSKIQSALGYMAPEFAC----RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~----~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
.......||+.|+|||++. ....++.++||||+||++|||++|+.||...... .....++...
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~------------ 297 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHK------------ 297 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHH------------
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhcc------------
Confidence 2334567999999999984 1456899999999999999999999999754332 2222222111
Q ss_pred hhcCCCC---hhhHHHHHHHHHhhccCCCCC--CCCHHHHHH
Q 002094 915 RLRGNFP---ADEAIPVIKLGLICASQVPSN--RPDMEEVVN 951 (967)
Q Consensus 915 ~~~~~~~---~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~ 951 (967)
.+..+| ...+.++.+++.+|+..+|++ ||+++|+++
T Consensus 298 -~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 298 -ERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -ccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 111122 335677999999999888888 999999875
No 155
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.7e-38 Score=347.18 Aligned_cols=248 Identities=22% Similarity=0.311 Sum_probs=204.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ +++.||||++..... ....+.+..|.+++..+ +||+|+++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 44688889999999999999976 478999999976432 23456788999999988 899999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||++||+|.+++..... +++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.... .
T Consensus 100 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~ 174 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW--D 174 (353)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC--T
T ss_pred EeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc--C
Confidence 999999999999986443 89999999999999999999999999999999999999999999999999975422 1
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ ....++.++||||+||++|||++|+.||...... .....+... .
T Consensus 175 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~---------------~ 237 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEH---------------N 237 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHH-TTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC---------------C
T ss_pred CcccccccCCccccChhhh-cCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHHHhC---------------C
Confidence 2223456799999999998 5667899999999999999999999999754322 212111111 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCC-----HHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPD-----MEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 951 (967)
..++...+.++.+++.+|++.||++||+ ++|+++
T Consensus 238 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 238 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2345566778999999999999999996 456543
No 156
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.3e-38 Score=350.14 Aligned_cols=247 Identities=21% Similarity=0.304 Sum_probs=203.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ +|+.||||++..... ....+.+..|.+++..+ +||||+++++++.+++..++|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 45688899999999999999975 589999999976432 23456788899998876 899999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||++||+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 171 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-- 171 (345)
T ss_dssp EECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred EeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC--
Confidence 999999999999976443 899999999999999999999999999999999999999999999999999754321
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||.+ .+..++.++|+||+||++|||++|+.||...... .....+.. . .
T Consensus 172 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~-----~----------~ 234 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEIL-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFHSIRM-----D----------N 234 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-----C----------C
T ss_pred CCcccCCCCCcccCChhhh-cCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHh-----C----------C
Confidence 1223456799999999998 5567899999999999999999999999754332 11111111 0 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHH-HHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDME-EVV 950 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~-evl 950 (967)
..++...+.++.+++.+|++.||++||++. |++
T Consensus 235 ~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 234455667899999999999999999997 553
No 157
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9.7e-38 Score=358.76 Aligned_cols=247 Identities=22% Similarity=0.342 Sum_probs=205.3
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|...+.||+|+||.||+|+.. +|+.||||++..... ......+.+|+++++.++||||+++++++..++..++|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4677889999999999999965 799999999975432 2345679999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~---~ 170 (476)
T 2y94_A 97 YVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---E 170 (476)
T ss_dssp CCSSEEHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT---C
T ss_pred CCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc---c
Confidence 9999999999976433 899999999999999999999999999999999999999999999999999876432 2
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......||+.|+|||.+......+.++||||+||++|||++|+.||+..... .....+..+ ...
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~---------------~~~ 234 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFKKICDG---------------IFY 234 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-HHHHHHHTT---------------CCC
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-HHHHHHhcC---------------CcC
Confidence 2335578999999999854444578999999999999999999999754322 111111111 112
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+...+.++.+++.+|++.||++|||++|+++
T Consensus 235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 34445677999999999999999999999986
No 158
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=351.60 Aligned_cols=246 Identities=22% Similarity=0.309 Sum_probs=197.1
Q ss_pred CCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecCCCc
Q 002094 687 DCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFISSGS 765 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 765 (967)
.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 567999999999999964 68999999998654 2456789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe--CCCCCeEEeecccccccCCCcccccccc
Q 002094 766 LYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI--DSSGEPKVGDFGLARLLPMLDRCILSSK 843 (967)
Q Consensus 766 L~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 843 (967)
|.+++..... .+++..+..++.||+.||+|||++||+||||||+||++ +.++.+||+|||+++...... ....
T Consensus 173 L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~ 247 (373)
T 2x4f_A 173 LFDRIIDESY--NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKV 247 (373)
T ss_dssp EHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCCC
T ss_pred HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cccc
Confidence 9999875432 38899999999999999999999999999999999999 667899999999998764322 2334
Q ss_pred ccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChh
Q 002094 844 IQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPAD 923 (967)
Q Consensus 844 ~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (967)
..||+.|+|||++ ....++.++|||||||++|||++|+.||...... ..+..+....+. ........
T Consensus 248 ~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~-----------~~~~~~~~ 314 (373)
T 2x4f_A 248 NFGTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWD-----------LEDEEFQD 314 (373)
T ss_dssp CCSSCTTCCHHHH-TTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC-----------SCSGGGTT
T ss_pred ccCCCcEeChhhc-cCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC-----------CChhhhcc
Confidence 5689999999988 6667899999999999999999999999754432 222222221111 00011123
Q ss_pred hHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 924 EAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 924 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+.++.+++.+|++.||.+|||++|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4567999999999999999999999987
No 159
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.2e-38 Score=344.47 Aligned_cols=248 Identities=23% Similarity=0.320 Sum_probs=195.0
Q ss_pred hccCCCCccCCCCceEEEEEEe----CCCcEEEEEEeecCCc---cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL----QDGRSVAIKKLTVSGL---IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 754 (967)
+.|+..+.||+|+||.||+++. .+++.||+|++..... ......+.+|++++++++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4478889999999999999996 4789999999976532 23345688999999999999999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+++++|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999976443 78999999999999999999999999999999999999999999999999875432
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
. ........||+.|+|||.+ ....++.++||||+|+++|||++|+.||...... .....+...
T Consensus 174 ~--~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~------------- 236 (327)
T 3a62_A 174 D--GTVTHTFCGTIEYMAPEIL-MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTIDKILKC------------- 236 (327)
T ss_dssp -------CTTSSCCTTSCHHHH-TTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHT-------------
T ss_pred C--CccccccCCCcCccCHhhC-cCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhC-------------
Confidence 1 1223356789999999998 5567899999999999999999999999754332 111111111
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRP-----DMEEVVN 951 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 951 (967)
...++...+.++.+++.+|++.||++|| ++.|+++
T Consensus 237 --~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 --KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1224455677899999999999999999 6777764
No 160
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.2e-38 Score=357.76 Aligned_cols=254 Identities=18% Similarity=0.193 Sum_probs=204.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|+.+ +++.||+|++..... ....+.+.+|+.+++.++|||||++++++.+++..++||
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 45688899999999999999976 588999999975321 122345889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||++||+|.+++.... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 149 E~~~gg~L~~~l~~~~----~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~-~ 223 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-M 223 (410)
T ss_dssp CCCTTEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-E
T ss_pred eCCCCCcHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC-c
Confidence 9999999999997642 7899999999999999999999999999999999999999999999999998764322 2
Q ss_pred cccccccccccccCcccccCcc---cCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 839 ILSSKIQSALGYMAPEFACRTV---KITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~---~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.......||+.|+|||++.... .++.++||||+||++|||++|+.||...... .....++.... .
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~~-----------~ 291 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHKN-----------S 291 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHH-----------H
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHHHhccc-----------c
Confidence 2234567999999999884332 2788999999999999999999999744322 22222221110 0
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCC--CCCHHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSN--RPDMEEVVNI 952 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~~ 952 (967)
...+.....+.++.+++.+|++.+|.+ ||+++|+++.
T Consensus 292 ~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 292 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111112345677999999999999988 9999998863
No 161
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-37 Score=340.90 Aligned_cols=265 Identities=18% Similarity=0.222 Sum_probs=202.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc--ccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI--KSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 45788899999999999999965 6889999999765322 23477999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++....... .
T Consensus 114 e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~ 189 (309)
T 2h34_A 114 RLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK-L 189 (309)
T ss_dssp ECCCCEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred EecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc-c
Confidence 99999999999986533 8999999999999999999999999999999999999999999999999987654321 1
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......|++.|+|||.+ ....++.++||||+|+++|||++|+.||...... .....+.... . . ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~----~----~---~~ 255 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERF-SESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI----P----R---PS 255 (309)
T ss_dssp -------CCGGGCCGGGT-CC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC----C----C---GG
T ss_pred ccccccCCCcCccCHHHH-cCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC----C----C---cc
Confidence 223355689999999998 5667899999999999999999999999754322 1111111100 0 0 11
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCC-CHHHHHHHHHhhcCCCCCcc
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRP-DMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~evl~~L~~~~~~~~~~~ 964 (967)
..+...+..+.+++.+|++.||++|| |++++++.|+++....++.+
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~ 302 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDR 302 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence 12344566799999999999999999 99999999999887665543
No 162
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3e-37 Score=369.18 Aligned_cols=334 Identities=17% Similarity=0.188 Sum_probs=199.8
Q ss_pred CCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEe
Q 002094 117 GTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLD 196 (967)
Q Consensus 117 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (967)
.+++.|++++|.+. .+|..+|..+++|++|+|++|++++..|..|+.+++|++|+|++|+|++..|..|+.+++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34455555555554 45555566666666666666666666666666666666666666666665555566666666666
Q ss_pred ecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCC
Q 002094 197 LSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTG 276 (967)
Q Consensus 197 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 276 (967)
|++|.+++.++..|+++++|++|+|++|.+++..|..|+++++|++|++++|.++ +
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT------------------------H 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS------------------------B
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC------------------------C
Confidence 6666666544444555555555555555555444444444445554444444444 2
Q ss_pred cCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhc
Q 002094 277 EVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFK 356 (967)
Q Consensus 277 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 356 (967)
.. +..+++|+.|++++|.+++. ...++ |+.|++++|.+.. ++.
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~------------------------L~~L~ls~n~l~~-~~~---- 228 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLSTL-----AIPIA------------------------VEELDASHNSINV-VRG---- 228 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE-----ECCTT------------------------CSEEECCSSCCCE-EEC----
T ss_pred cC---hhhhhhhhhhhcccCccccc-----cCCch------------------------hheeeccCCcccc-ccc----
Confidence 21 23334444444444444321 11122 3333333333321 000
Q ss_pred ccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccc
Q 002094 357 MGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAI 436 (967)
Q Consensus 357 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 436 (967)
...++|+.|+|++|.+++. ..+..+++|
T Consensus 229 --------------------------~~~~~L~~L~L~~n~l~~~--------------------------~~l~~l~~L 256 (597)
T 3oja_B 229 --------------------------PVNVELTILKLQHNNLTDT--------------------------AWLLNYPGL 256 (597)
T ss_dssp --------------------------SCCSCCCEEECCSSCCCCC--------------------------GGGGGCTTC
T ss_pred --------------------------ccCCCCCEEECCCCCCCCC--------------------------hhhccCCCC
Confidence 0012455555555555431 234445556
Q ss_pred cEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCC
Q 002094 437 QVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFN 516 (967)
Q Consensus 437 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 516 (967)
+.|+|++|.+++..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|
T Consensus 257 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N 334 (597)
T 3oja_B 257 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN 334 (597)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSS
T ss_pred CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCC
Confidence 666666666666666666666677777777777764 4556677788888888888888 57777888888888899888
Q ss_pred ccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCCCCCCcc
Q 002094 517 DLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCGSV 570 (967)
Q Consensus 517 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 570 (967)
++++.. +..+++|+.|++++|+|+|..+. .++..+....+.+++..|+.+
T Consensus 335 ~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 335 SIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 888653 56678899999999999886543 345566667788999999864
No 163
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.7e-38 Score=339.74 Aligned_cols=251 Identities=25% Similarity=0.377 Sum_probs=200.7
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC-CceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP-SLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||++..+ |+.||||.+.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 34688889999999999999875 8999999987543 456799999999999999999999997654 478999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++++|.+++...... .+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc-----
Confidence 9999999999754321 2688999999999999999999999999999999999999999999999998755321
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
.....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||........ ... +.......
T Consensus 171 ~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~-------------~~~~~~~~ 234 (278)
T 1byg_A 171 QDTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPR-------------VEKGYKMD 234 (278)
T ss_dssp -----CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHH-------------HTTTCCCC
T ss_pred ccCCCccccccCHHHh-CCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH-------------HhcCCCCC
Confidence 2234567889999988 56678999999999999999998 9999975433211 111 11112233
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
.+...+..+.+++.+|++.||++|||+.|+++.|++++.
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 456677889999999999999999999999999999864
No 164
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.6e-38 Score=374.15 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=204.4
Q ss_pred CCccCCCCceEEEEEEeC---CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecC
Q 002094 687 DCELGRGGFGVVYRTILQ---DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFIS 762 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 762 (967)
.+.||+|+||.||+|.+. .++.||||+++.... ....+++.+|++++++++|||||++++++.. +..++||||++
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 357999999999999753 467899999976543 3346789999999999999999999999964 55889999999
Q ss_pred CCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc-cccc
Q 002094 763 SGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR-CILS 841 (967)
Q Consensus 763 ~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 841 (967)
+|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....... ....
T Consensus 453 ~g~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 453 LGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp TEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCCHHHHHhhCCC---CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999976543 89999999999999999999999999999999999999999999999999987654222 1223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCC
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF 920 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (967)
....+|+.|+|||++ ....++.++|||||||++|||++ |+.||........ . +.+....+...
T Consensus 530 ~~~~~t~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~-------------~~i~~~~~~~~ 593 (635)
T 4fl3_A 530 THGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--T-------------AMLEKGERMGC 593 (635)
T ss_dssp -----CGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--H-------------HHHHTTCCCCC
T ss_pred cCCCCceeeeChhhh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--H-------------HHHHcCCCCCC
Confidence 344567889999998 66689999999999999999998 9999976544311 1 11122223445
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 921 PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+..++.++.++|.+||+.||++|||++++++.|+++..
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 66778889999999999999999999999999998753
No 165
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.4e-38 Score=342.59 Aligned_cols=262 Identities=23% Similarity=0.279 Sum_probs=200.3
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
.|+..+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 4677889999999999999975 589999999866543 22356788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
+++++|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 84 ~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 158 (311)
T 4agu_A 84 CDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--DY 158 (311)
T ss_dssp CSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--cc
Confidence 999999998876543 8999999999999999999999999999999999999999999999999998764322 22
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc--h------hhc
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV--E------DCV 912 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~ 912 (967)
.....||+.|+|||.+.....++.++||||+|+++|||++|+.||........ ... +......... . ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYL-IRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH-HHHHHCSCCHHHHHHHHTCGGG
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-HHHHhccccccccccccccccc
Confidence 33557899999999986557789999999999999999999999975543322 111 1111110000 0 000
Q ss_pred c-hhhcC--C------CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 913 D-ARLRG--N------FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 913 ~-~~~~~--~------~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. ..... . .....+.++.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 00000 0 01245667999999999999999999999986
No 166
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=345.33 Aligned_cols=245 Identities=24% Similarity=0.305 Sum_probs=192.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||+||+|+.. +|+.||||++..... ......+..|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 44788899999999999999976 799999999865432 23334555666655555 8999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+ +++|.+++..... .+++..++.++.|++.||+|||+++|+||||||+||+++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred ecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC---
Confidence 999 6699988876533 3899999999999999999999999999999999999999999999999999866432
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......||+.|+|||++. + .++.++|||||||++|||++|..|+..... ... +.... ...
T Consensus 211 ~~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~-----~~~~~--------~~~ 271 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQ-G-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQ-----LRQGY--------LPP 271 (311)
T ss_dssp ----CCCCCGGGCCGGGGG-T-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHH-----HTTTC--------CCH
T ss_pred CCCcccCCCccccCHhHhc-C-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHH-----HhccC--------CCc
Confidence 2234556899999999883 3 689999999999999999999776542211 111 11110 011
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.++...+.++.+++.+|++.||++|||++|+++
T Consensus 272 ~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 112334567999999999999999999999886
No 167
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=359.09 Aligned_cols=319 Identities=22% Similarity=0.199 Sum_probs=178.3
Q ss_pred EEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCC
Q 002094 121 VVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNN 200 (967)
Q Consensus 121 ~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 200 (967)
.++.++++++ .+|..+ .++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3444444444 344433 245666666666666665666666666666666666666666666666666666666666
Q ss_pred cCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCch
Q 002094 201 LLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPD 280 (967)
Q Consensus 201 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 280 (967)
.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|.++++|+.|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 66665555666666666666666666666666666666777777777666666666666666677777777766665556
Q ss_pred hhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhccccc
Q 002094 281 WIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQ 360 (967)
Q Consensus 281 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~ 360 (967)
.+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~-------------------------- 224 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-------------------------- 224 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC--------------------------
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCc--------------------------
Confidence 666666666666666666655555555566666666655554433333222222
Q ss_pred EEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEE
Q 002094 361 TVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLD 440 (967)
Q Consensus 361 ~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 440 (967)
+|+.|+|++|++++..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|+
T Consensus 225 --------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (477)
T 2id5_A 225 --------------------------NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQ 278 (477)
T ss_dssp --------------------------CCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEE
T ss_pred --------------------------cccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEE
Confidence 344444444444433223344444444444444444433344444444444444
Q ss_pred ecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCc
Q 002094 441 FSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLT 495 (967)
Q Consensus 441 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 495 (967)
|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 279 LVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp CCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred CCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 4444444444444444444444444444444333334444444444444444443
No 168
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=350.09 Aligned_cols=271 Identities=17% Similarity=0.202 Sum_probs=204.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC----CCcEEEEEEeecCCccc----------cHHHHHHHHHHHcCCCCCceeeeeeE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ----DGRSVAIKKLTVSGLIK----------SQEDFEKEMKTLGKIRHHNLVALEGY 747 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~ 747 (967)
+.|+..+.||+|+||.||+|... ++..||||++....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45788899999999999999975 57889999987654210 11346778899999999999999999
Q ss_pred EEc----CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC--Ce
Q 002094 748 YWT----PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG--EP 821 (967)
Q Consensus 748 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~--~~ 821 (967)
+.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+||+++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcE
Confidence 987 67889999999 999999998654 389999999999999999999999999999999999998877 99
Q ss_pred EEeecccccccCCCccc-----cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHH
Q 002094 822 KVGDFGLARLLPMLDRC-----ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLC 896 (967)
Q Consensus 822 kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~ 896 (967)
||+|||+++.+...... .......||+.|+|||.+ ....++.++||||||+++|||++|+.||...........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH-KGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH-HTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHh-cCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 99999999876432211 112355789999999998 556789999999999999999999999964323222222
Q ss_pred HHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 897 DMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
......... ......... .....+.++.+++.+|++.||++|||++++++.|+++...+.+
T Consensus 272 ~~~~~~~~~--~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 332 (345)
T 2v62_A 272 TAKTNLLDE--LPQSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGP 332 (345)
T ss_dssp HHHHHHHHT--TTHHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCC
T ss_pred HHHHhhccc--ccHHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccC
Confidence 222211110 011010000 1124566799999999999999999999999999987765543
No 169
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-37 Score=336.31 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=199.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|...+.||+|+||.||++... ++..||+|++.........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 45788899999999999999964 68999999998766556678899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe---CCCCCeEEeecccccccCCCc
Q 002094 761 ISSGSLYKHLHDGS-SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI---DSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 761 ~~~gsL~~~l~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
+++|+|.+++.... ....+++..++.++.|++.||+|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~- 180 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD- 180 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc-
Confidence 99999999986432 11238999999999999999999999999999999999999 45678999999999765432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......|++.|+|||.+ . ..++.++||||+|+++|||++|+.||......... ..... .. ...
T Consensus 181 --~~~~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~~~--~~--------~~~ 244 (285)
T 3is5_A 181 --EHSTNAAGTALYMAPEVF-K-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKATY--KE--------PNY 244 (285)
T ss_dssp --------CTTGGGCCHHHH-T-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHH--CC--------CCC
T ss_pred --ccCcCcccccCcCChHHh-c-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhhcc--CC--------ccc
Confidence 223456689999999987 3 46889999999999999999999999754432111 11100 00 000
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. ......+.++.+++.+|++.||++|||++|+++
T Consensus 245 ~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 A-VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C-C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c-cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 011124567899999999999999999999875
No 170
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7e-38 Score=349.94 Aligned_cols=248 Identities=21% Similarity=0.260 Sum_probs=195.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHH-HcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKT-LGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ +++.||||++..... ......+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 34688899999999999999976 588999999976543 2234456677776 5778999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||++||+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.... .
T Consensus 118 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~--~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE--H 192 (373)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC--C
T ss_pred EeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc--C
Confidence 999999999999976443 88999999999999999999999999999999999999999999999999975432 1
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ ....++.++|+||+||++|||++|+.||...... .....+... .
T Consensus 193 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~---------------~ 255 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVL-HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNILNK---------------P 255 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHHHHS---------------C
T ss_pred CCccccccCCccccCHHHh-CCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhc---------------c
Confidence 2233456799999999998 5667899999999999999999999999754322 212222111 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..++...+..+.+++.+|++.||++||++.+.++
T Consensus 256 ~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 256 LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 1234556677999999999999999999864333
No 171
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=343.08 Aligned_cols=270 Identities=23% Similarity=0.334 Sum_probs=208.7
Q ss_pred hhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEE----cCCcee
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYW----TPSLQL 755 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~ 755 (967)
.+.|+..+.||+|+||.||++.. .+++.||||++.... ....+.+.+|++++++++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 34578899999999999999996 578999999987643 345678999999999999999999999986 345778
Q ss_pred EEEEecCCCchhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 756 LIYEFISSGSLYKHLHDGS-SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+.....
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 9999999999999997632 122489999999999999999999999999999999999999999999999999876532
Q ss_pred Ccccc-------ccccccccccccCcccccCc--ccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhcc
Q 002094 835 LDRCI-------LSSKIQSALGYMAPEFACRT--VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALED 905 (967)
Q Consensus 835 ~~~~~-------~~~~~~gt~~y~aPE~~~~~--~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (967)
..... ......||+.|+|||.+... ..++.++||||||+++|||++|+.||.............+
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~------ 260 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV------ 260 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH------
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh------
Confidence 11100 11234568899999988432 2368899999999999999999999953111100111111
Q ss_pred CCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 906 GRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
........+...+.++.+++.+|++.||++|||++|+++.|+.+....-+++
T Consensus 261 -------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 261 -------QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp -------HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred -------hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 1111222234556789999999999999999999999999999987765543
No 172
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8e-38 Score=344.44 Aligned_cols=250 Identities=22% Similarity=0.372 Sum_probs=181.2
Q ss_pred CCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEEcCCceeEEEEecC
Q 002094 685 NKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYWTPSLQLLIYEFIS 762 (967)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 762 (967)
...+.||+|+||.||+|..+ +++.||||++... ....+.+|+++++.+. ||||+++++++.++...++||||++
T Consensus 14 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp TTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cCCCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 34578999999999999965 6899999999643 4567889999999996 9999999999999999999999999
Q ss_pred CCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC---CeEEeecccccccCCCcccc
Q 002094 763 SGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG---EPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 763 ~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~ 839 (967)
+|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|||+++..... ..
T Consensus 90 ~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~ 164 (325)
T 3kn6_A 90 GGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQ 164 (325)
T ss_dssp SCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred CCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC--CC
Confidence 9999999987543 89999999999999999999999999999999999997665 7999999999865432 22
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccch--HhHHHHHHhhhccCCchhhcchhhc
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDV--VVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
......||+.|+|||.+ ....++.++||||+|+++|||++|+.||....... ....+..... ..+... ..
T Consensus 165 ~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i-~~~~~~------~~ 236 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-KKGDFS------FE 236 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH-TTTCCC------CC
T ss_pred cccccCCCcCccCHHHh-cCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH-HcCCCC------CC
Confidence 23345679999999998 66678999999999999999999999997433210 0011111111 111000 00
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.......+.++.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0011235677999999999999999999998864
No 173
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-37 Score=343.16 Aligned_cols=263 Identities=23% Similarity=0.329 Sum_probs=202.4
Q ss_pred HhhccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCC--CCCceeeeeeEEEcC----Cc
Q 002094 680 ANALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI--RHHNLVALEGYYWTP----SL 753 (967)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~~ 753 (967)
..+.|+..+.||+|+||.||+|+.. ++.||||++... ....+..|.+++... +||||+++++++... ..
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 3456789999999999999999986 899999998643 234455566666554 899999999999876 67
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CcccCCCCCCCEEeCCCCCeEEee
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT--------NIIHYNLKSTNVLIDSSGEPKVGD 825 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~--------~ivH~Dik~~Nill~~~~~~kl~D 825 (967)
.++||||+++|+|.++++.. .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred eEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 89999999999999999764 289999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCcccc--ccccccccccccCcccccCcccCCc------ccchhhHHHHHHHHHcC----------CCCCCC
Q 002094 826 FGLARLLPMLDRCI--LSSKIQSALGYMAPEFACRTVKITE------KCDVYGFGVLVLEVVTG----------KRPVEY 887 (967)
Q Consensus 826 fg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~t~------~~Dv~slGvll~elltg----------~~p~~~ 887 (967)
||++.......... ......||+.|+|||.+ .....+. ++|||||||++|||++| +.||..
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL-DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHH-TTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhc-ccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 99997664322211 12345789999999988 3333333 49999999999999999 666653
Q ss_pred CccchHhHHHHHHhhhccCCchhhcchhhcCCCC-----hhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 888 MEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFP-----ADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
..........+.... . ....+...+ ..++.++.+++.+|++.||++|||++|+++.|+++.+..+
T Consensus 265 ~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 265 LVPSDPSYEDMREIV-C--------IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TSCSSCCHHHHHHHH-T--------TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hcCCCCchhhhHHHH-h--------hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 322221111111111 1 011122222 3677889999999999999999999999999999886654
No 174
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.7e-38 Score=342.25 Aligned_cols=266 Identities=22% Similarity=0.373 Sum_probs=201.3
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|.. .+|+.||||++..... ......+.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 3478889999999999999996 4789999999975432 334567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 759 EFISSGSLYKHLHDGS-SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
||+++++|.+++.... ....+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~- 190 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 190 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC-
Confidence 9999999999987521 12238899999999999999999999999999999999999999999999999987654321
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
.......|++.|+|||.+ ....++.++||||||+++|||++|+.||.............+. .. ...
T Consensus 191 -~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~--------~~~ 256 (310)
T 2wqm_A 191 -TAAHSLVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE----QC--------DYP 256 (310)
T ss_dssp ---------CCSSCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH----TT--------CSC
T ss_pred -ccccccCCCeeEeChHHh-CCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh----cc--------cCC
Confidence 222345688999999988 5667899999999999999999999999754333222221111 11 011
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCC
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDG 962 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 962 (967)
.......+.++.+++.+|++.||++|||++++++.|+++.....+
T Consensus 257 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 257 PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 111234567799999999999999999999999999998754433
No 175
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=350.62 Aligned_cols=272 Identities=24% Similarity=0.368 Sum_probs=212.6
Q ss_pred hccCCCCccCCCCceEEEEEEe-----CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC--ce
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-----QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS--LQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 754 (967)
+.|+..+.||+|+||.||++.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 4467788999999999999984 368999999997643 345678999999999999999999999987644 67
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999987543 389999999999999999999999999999999999999999999999999987654
Q ss_pred Cccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc----cCCch
Q 002094 835 LDRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE----DGRVE 909 (967)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~ 909 (967)
.... .......++..|+|||.+ ....++.++||||+|+++|||++|..||...... ..+....... ...+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESL-TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhh-cCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 3221 122344567789999988 5557889999999999999999999998532111 1111000000 00011
Q ss_pred hhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 910 DCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
+.+....+...+...+.++.+++.+|++.||++|||+.|+++.|++++.++
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 122222233445667788999999999999999999999999999987643
No 176
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=346.06 Aligned_cols=245 Identities=21% Similarity=0.301 Sum_probs=203.3
Q ss_pred HhhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCcc-------ccHHHHHHHHHHHcCCCCCceeeeeeEEEcC
Q 002094 680 ANALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLI-------KSQEDFEKEMKTLGKIRHHNLVALEGYYWTP 751 (967)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 751 (967)
..+.|+..+.||+|+||.||+|+. .+++.||||++...... .....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 445678899999999999999995 46899999999765421 1234678899999999999999999999999
Q ss_pred CceeEEEEecCCC-chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 752 SLQLLIYEFISSG-SLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 752 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
+..++||||+.+| +|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999776 99999986544 8999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchh
Q 002094 831 LLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVED 910 (967)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (967)
...... ......||+.|+|||.+......+.++||||+|+++|||++|+.||......
T Consensus 179 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------- 236 (335)
T 3dls_A 179 YLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------- 236 (335)
T ss_dssp ECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------
T ss_pred ECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------
Confidence 764322 2334668999999999844444488999999999999999999999642210
Q ss_pred hcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 911 CVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
... ....+...+.++.+++.+|++.||++|||++|+++.
T Consensus 237 -~~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEA--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTT--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -Hhh--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 112233456779999999999999999999999874
No 177
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4e-38 Score=345.29 Aligned_cols=261 Identities=21% Similarity=0.301 Sum_probs=197.5
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce----
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ---- 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 754 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ......+.+|++++++++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4578889999999999999995 5789999999976542 22346789999999999999999999998765443
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+++++|.++++.... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999976543 89999999999999999999999999999999999999999999999999986643
Q ss_pred Cccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 835 LDRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
.... .......||+.|+|||.+ ....++.++||||+|+++|||++|+.||........ ..... ...... .
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~----~~~~~~---~ 239 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQA-RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHV----REDPIP---P 239 (311)
T ss_dssp -------------CCTTCCHHHH-HTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH----HCCCCC---H
T ss_pred cccccccccccCcCcccCCHHHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHh----cCCCCC---c
Confidence 2221 223345689999999998 556789999999999999999999999975443221 11111 111000 0
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHH-HHHHHHhhcC
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEE-VVNILELIQS 958 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e-vl~~L~~~~~ 958 (967)
.. .....+.++.+++.+|++.||++||++.+ +.+.+.++..
T Consensus 240 ~~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 240 SA----RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp HH----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred cc----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 00 12235567999999999999999996555 5566665543
No 178
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.4e-37 Score=335.49 Aligned_cols=247 Identities=28% Similarity=0.427 Sum_probs=202.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|... ++..||||++..... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 34678889999999999999865 577999999865432 223567999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~---- 161 (279)
T 3fdn_A 89 EYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---- 161 (279)
T ss_dssp CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred ecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc----
Confidence 99999999999976543 88999999999999999999999999999999999999999999999999865432
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......|++.|+|||.+ ....++.++||||+|+++|+|++|+.||........ ...+. ....
T Consensus 162 ~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~---------------~~~~ 224 (279)
T 3fdn_A 162 SRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS---------------RVEF 224 (279)
T ss_dssp ------CCCCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHH---------------HTCC
T ss_pred ccccccCCCCCccCHhHh-ccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHHHH---------------hCCC
Confidence 122355789999999988 566788999999999999999999999975432211 11111 1122
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
.++...+..+.+++.+|++.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 3455566779999999999999999999999864
No 179
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-37 Score=346.49 Aligned_cols=247 Identities=28% Similarity=0.415 Sum_probs=200.9
Q ss_pred ccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|+. .+++.||||++..... ....+++.+|++++++++||||+++++++..++..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 367788999999999999995 5789999999976542 2234678999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+. |++.+++..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 135 ~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----- 206 (348)
T 1u5q_A 135 YCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206 (348)
T ss_dssp CCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred cCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence 997 588888764332 389999999999999999999999999999999999999999999999999976542
Q ss_pred ccccccccccccCccccc--CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 840 LSSKIQSALGYMAPEFAC--RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~--~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
.....||+.|+|||.+. ....++.++||||||+++|||++|+.||........ ...+.. .. ..
T Consensus 207 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-~~~~~~----~~---------~~ 271 (348)
T 1u5q_A 207 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQ----NE---------SP 271 (348)
T ss_dssp -BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHH----SC---------CC
T ss_pred -CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHh----cC---------CC
Confidence 23456899999999874 356789999999999999999999999975433211 111111 10 01
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
...+...+..+.+++.+|++.||++|||++++++.
T Consensus 272 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 272 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11233456679999999999999999999998764
No 180
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-37 Score=361.35 Aligned_cols=251 Identities=24% Similarity=0.326 Sum_probs=207.1
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|..+ +|+.||||++..... ......+.+|++++++++|||||++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 34677889999999999999975 689999999976432 234567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||++||+|.+++...... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 264 Ey~~gg~L~~~l~~~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp CCCCSCBHHHHHHSSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred EcCCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 999999999999865433 38999999999999999999999999999999999999999999999999998764322
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccc--hHhHHHHHHhhhccCCchhhcchhh
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDD--VVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
......||+.|+|||++ ....++.++||||+||++|||++|+.||...... .......+. ..
T Consensus 341 -~~~~~~GT~~Y~APEvl-~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--------------~~ 404 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--------------EV 404 (576)
T ss_dssp -CEECCCSCGGGCCHHHH-TTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--------------HC
T ss_pred -cccccCCCccccCHHHH-cCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--------------cc
Confidence 22345799999999998 5567899999999999999999999999754321 111111111 01
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRP-----DMEEVVN 951 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 951 (967)
...++...+.++.+++.+|++.||++|| +++|+++
T Consensus 405 ~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 405 PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 2234556677899999999999999999 7788764
No 181
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.6e-37 Score=342.04 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=205.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-----ccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-----KSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|... +|+.||||.+...... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45788899999999999999965 6899999999765432 24678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC----CeEEeecccccc
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG----EPKVGDFGLARL 831 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~----~~kl~Dfg~a~~ 831 (967)
+||||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++ .+||+|||++..
T Consensus 92 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEECCCCSCBHHHHHHTCSC---EEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 99999999999999976433 88999999999999999999999999999999999999887 799999999987
Q ss_pred cCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh
Q 002094 832 LPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC 911 (967)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (967)
.... .......||+.|+|||.+ ....++.++||||+|+++|+|++|+.||...... .....+..... .
T Consensus 169 ~~~~---~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~---~---- 236 (321)
T 2a2a_A 169 IEDG---VEFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITSVSY---D---- 236 (321)
T ss_dssp CCTT---CCCCCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCC---C----
T ss_pred cCcc---ccccccCCCCCccCcccc-cCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhccc---c----
Confidence 6432 223455689999999998 5667899999999999999999999999754332 11111111000 0
Q ss_pred cchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 912 VDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.... .+...+..+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 237 FDEE----FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCHH----HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred cChh----hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 11234567999999999999999999999986
No 182
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.2e-39 Score=349.66 Aligned_cols=262 Identities=22% Similarity=0.335 Sum_probs=189.2
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcC--CCCCceeeeeeEEEcCC----cee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGK--IRHHNLVALEGYYWTPS----LQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~ 755 (967)
+.|+..+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 45788999999999999999875 899999998643 34667788888887 79999999999998766 679
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLH--------HTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH--------~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
+||||+++|+|.+++.... +++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 78 lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCCHHHHHHHCC----BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EEEeccCCCCHHHHHhccC----cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecC
Confidence 9999999999999997642 778889999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCcccc--ccccccccccccCcccccCcc-----cCCcccchhhHHHHHHHHHcC----------CCCCCCCcc
Q 002094 828 LARLLPMLDRCI--LSSKIQSALGYMAPEFACRTV-----KITEKCDVYGFGVLVLEVVTG----------KRPVEYMED 890 (967)
Q Consensus 828 ~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----~~t~~~Dv~slGvll~elltg----------~~p~~~~~~ 890 (967)
++.......... ......||+.|+|||.+.... .++.++||||||+++|||++| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 997654322211 123346899999999884332 344789999999999999999 666643221
Q ss_pred chHhHHHHHHhhhccCCchhhcchhhcCCCCh-----hhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 891 DVVVLCDMVRGALEDGRVEDCVDARLRGNFPA-----DEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
......++. ........+...+. ..+..+.+++.+|++.||++|||++|++++|+++.++..
T Consensus 234 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 234 SDPSVEEMR---------KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp -CCCCC-CH---------HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred CCccHHHHH---------HHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 110000000 11111222233332 556789999999999999999999999999999987643
No 183
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=349.34 Aligned_cols=273 Identities=23% Similarity=0.275 Sum_probs=198.9
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHH--HcCCCCCceeeeeeEEEc-----CCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKT--LGKIRHHNLVALEGYYWT-----PSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~-----~~~~ 754 (967)
+.|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 3467788999999999999987 58999999997543 3344445444 455899999999986532 2356
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CcccCCCCCCCEEeCCCCCeEEee
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT---------NIIHYNLKSTNVLIDSSGEPKVGD 825 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~---------~ivH~Dik~~Nill~~~~~~kl~D 825 (967)
++||||+++|+|.+++.... .++..+++++.||+.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 89999999999999997643 58899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCcc------ccccccccccccccCcccccCc------ccCCcccchhhHHHHHHHHHcCCCCCCCCccchH
Q 002094 826 FGLARLLPMLDR------CILSSKIQSALGYMAPEFACRT------VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVV 893 (967)
Q Consensus 826 fg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~------~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~ 893 (967)
||++........ ........||+.|+|||++... ..++.++||||||+++|||++|..||........
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 999987643211 1122345689999999988431 4567899999999999999999777643221110
Q ss_pred hHHHHHHhhhccCCchh----hcchhhcCCC------ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 894 VLCDMVRGALEDGRVED----CVDARLRGNF------PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 894 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
....+...........+ ......+..+ ....+..+.+++.+|++.||++|||++|+++.|+++....+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 00000000000000000 0001111222 2345678999999999999999999999999999998776654
No 184
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.3e-37 Score=338.07 Aligned_cols=250 Identities=26% Similarity=0.421 Sum_probs=209.0
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.+.|+..+.||+|+||.||+|... +++.||||++.........+.+.+|+.++++++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 345788899999999999999854 6899999999876655567889999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++++|.+++... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+....... .
T Consensus 101 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I 174 (303)
T ss_dssp CCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--C
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--c
Confidence 99999999998652 38999999999999999999999999999999999999999999999999997664321 2
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......|++.|+|||.+ ....++.++||||||+++|||++|+.||........ ...+. ......
T Consensus 175 ~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~-------------~~~~~~ 238 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIP-------------KNNPPT 238 (303)
T ss_dssp CBCCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHH-------------HSCCCC
T ss_pred ccCccCCCcCccCHHHH-hcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHHhh-------------cCCCCC
Confidence 23456789999999998 566789999999999999999999999975433211 11110 011222
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
.+...+..+.+++.+|++.||++|||+.|+++.
T Consensus 239 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 344566779999999999999999999999874
No 185
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3e-37 Score=333.84 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=204.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|..+ +++.||+|++..... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45788889999999999999965 589999999976543 3345678899999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC---eEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE---PKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~---~kl~Dfg~a~~~~~~~ 836 (967)
|+++++|.+.+..... +++..+..++.|++.||+|||++||+||||||+||+++.++. +||+|||.+......
T Consensus 86 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~- 161 (284)
T 3kk8_A 86 LVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS- 161 (284)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS-
T ss_pred cCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC-
Confidence 9999999998876543 899999999999999999999999999999999999986655 999999999766432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......|++.|+|||.+ ....++.++||||+|+++|+|++|+.||...... .....+...... .
T Consensus 162 --~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-----------~ 226 (284)
T 3kk8_A 162 --EAWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYD-----------Y 226 (284)
T ss_dssp --CBCCCSCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC-----------C
T ss_pred --ccccCCCCCcCCcCchhh-cCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhcccc-----------C
Confidence 223356789999999998 5667899999999999999999999999654332 111111111110 0
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
........+.++.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11112345667999999999999999999999977
No 186
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=354.60 Aligned_cols=255 Identities=17% Similarity=0.182 Sum_probs=202.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+++.+ +|+.||||++..... ....+.+.+|..++..++||||+++++++.+++..++||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 45688899999999999999975 689999999975321 122345889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||++||+|.+++..... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 141 E~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~-~ 217 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-T 217 (412)
T ss_dssp CCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-C
T ss_pred cCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC-c
Confidence 99999999999976432 38999999999999999999999999999999999999999999999999998764322 1
Q ss_pred cccccccccccccCcccccC------cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhc
Q 002094 839 ILSSKIQSALGYMAPEFACR------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV 912 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (967)
.......||+.|+|||++.. ...++.++||||+||++|||++|+.||...... .....++......
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~------- 289 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHL------- 289 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHC-------
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCc-------
Confidence 22334679999999998842 356899999999999999999999999754332 2222222111000
Q ss_pred chhhcCCCChhhHHHHHHHHHhhccCCCCCC---CCHHHHHH
Q 002094 913 DARLRGNFPADEAIPVIKLGLICASQVPSNR---PDMEEVVN 951 (967)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---pt~~evl~ 951 (967)
.....+...+.++.++|.+|+. +|++| |+++|+++
T Consensus 290 ---~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 ---SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ---CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ---CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0011223456779999999999 99988 58888864
No 187
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.2e-37 Score=331.30 Aligned_cols=246 Identities=20% Similarity=0.310 Sum_probs=203.9
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.+.|+..+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 345788899999999999999965 47799999997654 3456789999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe---CCCCCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI---DSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||++ +.++.++|+|||.+......
T Consensus 87 ~~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~- 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG- 162 (277)
T ss_dssp CCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-
T ss_pred ccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-
Confidence 9999999999876543 8899999999999999999999999999999999999 78899999999999866432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......||+.|+|||.+ .+ .++.++||||+|+++|||++|+.||...... .....+....
T Consensus 163 --~~~~~~~~t~~y~aPE~~-~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~-------------- 223 (277)
T 3f3z_A 163 --KMMRTKVGTPYYVSPQVL-EG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EVMLKIREGT-------------- 223 (277)
T ss_dssp --SCBCCCCSCTTTCCHHHH-TT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCC--------------
T ss_pred --cchhccCCCCCccChHHh-cc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCC--------------
Confidence 223456689999999988 33 4899999999999999999999999754432 1111111111
Q ss_pred cCCCCh----hhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 917 RGNFPA----DEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 917 ~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+. ..+..+.+++.+|++.||++|||+.|+++
T Consensus 224 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 224 -FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111 34567999999999999999999999975
No 188
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=333.02 Aligned_cols=249 Identities=22% Similarity=0.354 Sum_probs=185.8
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|+. .+|+.||||.+..... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 3468888999999999999996 4789999999965432 223477999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++..... .+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||.+.......
T Consensus 91 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-- 166 (278)
T ss_dssp ECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred ecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC--
Confidence 99999999999986432 38999999999999999999999999999999999999999999999999998664321
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......|++.|+|||.+ ....++.++||||+|+++|||++|+.||........ .. ..... ..
T Consensus 167 ~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~---------~~~~~--~~ 229 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIA-TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LN---------KVVLA--DY 229 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCSS--CC
T ss_pred CcceeccCCCCcCCcchh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HH---------HHhhc--cc
Confidence 122345688999999988 556788999999999999999999999975432211 00 00000 11
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+...+.++.+++.+|++.||++|||++++++
T Consensus 230 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 234456678999999999999999999999876
No 189
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-37 Score=358.94 Aligned_cols=248 Identities=23% Similarity=0.287 Sum_probs=196.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCC--ccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSG--LIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|... +|+.||||++.... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 45788899999999999999954 68999999997542 1234467889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHH-TNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~-~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
||+++|+|.+++..... +++..+..++.||+.||+|||+ +||+||||||+||+++.++.+||+|||+++.... .
T Consensus 228 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--D 302 (446)
T ss_dssp CCCSSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred eeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC--C
Confidence 99999999999976543 8999999999999999999998 9999999999999999999999999999975432 1
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ ....++.++||||+||++|||++|+.||...... .....+... .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~---------------~ 365 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELILME---------------E 365 (446)
T ss_dssp ----CCSSSCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC---------------C
T ss_pred CcccccccCCccccCHhhc-CCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-HHHHHHHhC---------------C
Confidence 2233456799999999998 6668899999999999999999999999754332 111111110 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCC-----CHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRP-----DMEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 951 (967)
..++...+.++.+++.+|++.||++|| |++|+++
T Consensus 366 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 366 IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 224555677899999999999999999 9999875
No 190
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=345.80 Aligned_cols=262 Identities=22% Similarity=0.297 Sum_probs=196.7
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEec
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
.|...+.||+|+||.||+|... +++.||||++...........+.+|++++++++||||+++++++..++..++||||+
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 82 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence 3677889999999999999975 689999999975543222234567999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILS 841 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 841 (967)
++ +|.+++..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ....
T Consensus 83 ~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~ 157 (324)
T 3mtl_A 83 DK-DLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TKTY 157 (324)
T ss_dssp SE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred cc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC--cccc
Confidence 85 89998876543 3889999999999999999999999999999999999999999999999999765421 2223
Q ss_pred ccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc---hhhcchh---
Q 002094 842 SKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV---EDCVDAR--- 915 (967)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--- 915 (967)
....||+.|+|||.+.....++.++||||+|+++|||++|+.||....... .... +......+.. .......
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~-i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHF-IFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH-HHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHhCCCChHhchhhhcchhhc
Confidence 345679999999998555678999999999999999999999997554322 2222 2222211111 1111000
Q ss_pred ------hcC----CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 ------LRG----NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ------~~~----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
... ......+.++.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 011234567899999999999999999999987
No 191
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5e-38 Score=339.92 Aligned_cols=253 Identities=23% Similarity=0.392 Sum_probs=204.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEc----------
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWT---------- 750 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 750 (967)
..|+..+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 44688899999999999999976 79999999997543 357889999999999999999998854
Q ss_pred ------CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEe
Q 002094 751 ------PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVG 824 (967)
Q Consensus 751 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~ 824 (967)
....++||||+++++|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence 34578999999999999999764322 38999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc
Q 002094 825 DFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 825 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
|||++....... ......|++.|+|||.+ ....++.++||||+|+++|||++|..|+... . ..... +.
T Consensus 165 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~---~~~~~-~~ 232 (284)
T 2a19_B 165 DFGLVTSLKNDG---KRTRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELLHVCDTAFET----S---KFFTD-LR 232 (284)
T ss_dssp CCTTCEESSCCS---CCCCCCSCCTTSCHHHH-HCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----H---HHHHH-HH
T ss_pred cchhheeccccc---cccccCCcccccChhhh-ccCCCcchhhhHHHHHHHHHHHhcCCcchhH----H---HHHHH-hh
Confidence 999998764322 23345689999999998 5567899999999999999999999987311 0 11111 11
Q ss_pred cCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCcc
Q 002094 905 DGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQE 964 (967)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 964 (967)
....+...+..+.+++.+|++.||++|||+.|+++.|+.+.+..+..+
T Consensus 233 ------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~ 280 (284)
T 2a19_B 233 ------------DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 280 (284)
T ss_dssp ------------TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC------
T ss_pred ------------cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCccc
Confidence 112234455678999999999999999999999999999987766543
No 192
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=337.41 Aligned_cols=263 Identities=22% Similarity=0.278 Sum_probs=200.7
Q ss_pred hhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc----cccHHHHHHHHHHHcCC---CCCceeeeeeEEEcCC
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL----IKSQEDFEKEMKTLGKI---RHHNLVALEGYYWTPS 752 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~ 752 (967)
.+.|+..+.||+|+||.||+|+. .+++.||||++..... ......+.+|+++++++ +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 44678899999999999999995 4689999999875431 12234677788777766 4999999999997655
Q ss_pred -----ceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 753 -----LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 753 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
..++||||+. ++|.+++....... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTC-SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 4789999997 59999998765433 8999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCC
Q 002094 828 LARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGR 907 (967)
Q Consensus 828 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (967)
+++.... ........||+.|+|||.+ ....++.++||||+||++|||++|++||...... .....+... .....
T Consensus 166 ~a~~~~~---~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~-~~~~~ 239 (308)
T 3g33_A 166 LARIYSY---QMALTPVVVTLWYRAPEVL-LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDL-IGLPP 239 (308)
T ss_dssp CTTTSTT---CCCSGGGGCCCSSCCHHHH-HTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHH-HCCCC
T ss_pred cccccCC---CcccCCccccccccCchHH-cCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-hCCCC
Confidence 9986643 2223456789999999998 5567899999999999999999999999754432 222222221 11111
Q ss_pred chhhcc------hhhcC-------CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 908 VEDCVD------ARLRG-------NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 908 ~~~~~~------~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+.. ..... ...++.+..+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 111000 00000 011245567899999999999999999999876
No 193
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=333.66 Aligned_cols=251 Identities=22% Similarity=0.361 Sum_probs=201.6
Q ss_pred CCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEecCC
Q 002094 685 NKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEFISS 763 (967)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 763 (967)
.....||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 4455899999999999995 468899999997654 34457899999999999999999999999999999999999999
Q ss_pred CchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC-CCCeEEeecccccccCCCccccccc
Q 002094 764 GSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS-SGEPKVGDFGLARLLPMLDRCILSS 842 (967)
Q Consensus 764 gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~ 842 (967)
++|.+++.........++..+..++.|++.||+|||++||+||||||+||+++. ++.+||+|||.+....... ....
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 181 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCTE 181 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------C
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Cccc
Confidence 999999987654444778999999999999999999999999999999999987 8999999999998664321 1233
Q ss_pred cccccccccCcccccCc-ccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCC
Q 002094 843 KIQSALGYMAPEFACRT-VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFP 921 (967)
Q Consensus 843 ~~~gt~~y~aPE~~~~~-~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (967)
...|++.|+|||.+... ..++.++||||||+++|||++|+.||.............. ........+
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-------------~~~~~~~~~ 248 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-------------MFKVHPEIP 248 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH-------------HHCCCCCCC
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc-------------ccccccccc
Confidence 55689999999988432 2478999999999999999999999964333221111100 011223445
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 922 ADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 922 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+.++.+++.+|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 666778999999999999999999999875
No 194
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-37 Score=344.25 Aligned_cols=264 Identities=25% Similarity=0.307 Sum_probs=201.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-ccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-KSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 34677889999999999999975 4899999998765432 234668899999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++++|.++...... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++...... ..
T Consensus 105 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--GE 179 (331)
T ss_dssp CCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC--cc
Confidence 9999999888765443 899999999999999999999999999999999999999999999999999765432 12
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc-----------cCCc
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE-----------DGRV 908 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~ 908 (967)
......|++.|+|||.+.....++.++||||+|+++|||++|+.||........ ...++...-. ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcccc
Confidence 233456899999999985555789999999999999999999999975543322 2222211100 0000
Q ss_pred hhhcchhhcCC-----CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 909 EDCVDARLRGN-----FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 909 ~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.....+..... ..+..+..+.+++.+|++.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000 11245677999999999999999999998875
No 195
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-37 Score=350.53 Aligned_cols=265 Identities=22% Similarity=0.310 Sum_probs=194.5
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCC-CCceeeeeeEEEcCC--cee
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIR-HHNLVALEGYYWTPS--LQL 755 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~ 755 (967)
.+.|+..+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++++. ||||+++++++..++ ..+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 345788899999999999999954 689999999865422 344567889999999997 999999999997544 679
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+||||++ ++|.+++... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 88 lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 9999998 5899998763 2889999999999999999999999999999999999999999999999999865321
Q ss_pred c-------------------cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHH
Q 002094 836 D-------------------RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLC 896 (967)
Q Consensus 836 ~-------------------~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~ 896 (967)
. .........||+.|+|||++.....++.++||||+||++|||++|++||...... ..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~ 241 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-NQLE 241 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHH
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 1 1112234578999999999865578999999999999999999999999754432 2222
Q ss_pred HHHHhhhccCCchhh-----------cc----------------------hhhcCCCChhhHHHHHHHHHhhccCCCCCC
Q 002094 897 DMVRGALEDGRVEDC-----------VD----------------------ARLRGNFPADEAIPVIKLGLICASQVPSNR 943 (967)
Q Consensus 897 ~~~~~~~~~~~~~~~-----------~~----------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 943 (967)
.++ ..+..+....+ .+ .......+...+.++.+++.+|++.||++|
T Consensus 242 ~i~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 242 RII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHH-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHH-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 222 22211111100 00 000000112446679999999999999999
Q ss_pred CCHHHHHHH
Q 002094 944 PDMEEVVNI 952 (967)
Q Consensus 944 pt~~evl~~ 952 (967)
||++|+++.
T Consensus 321 ~t~~e~l~H 329 (388)
T 3oz6_A 321 ISANDALKH 329 (388)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhCC
Confidence 999998864
No 196
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5e-37 Score=341.71 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=209.2
Q ss_pred HHHhhccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcC--CCCCceeeeeeEEEcCC---
Q 002094 678 AGANALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGK--IRHHNLVALEGYYWTPS--- 752 (967)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~--- 752 (967)
....+.|+..+.||+|+||.||+|+.. ++.||||++... ....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 344556789999999999999999984 899999998643 35667888888776 78999999999998775
Q ss_pred -ceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCcccCCCCCCCEEeCCCCCeEE
Q 002094 753 -LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLH--------HTNIIHYNLKSTNVLIDSSGEPKV 823 (967)
Q Consensus 753 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH--------~~~ivH~Dik~~Nill~~~~~~kl 823 (967)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred ceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence 789999999999999999764 2899999999999999999999 899999999999999999999999
Q ss_pred eecccccccCCCcccc--ccccccccccccCcccccCcc-----cCCcccchhhHHHHHHHHHcC----------CCCCC
Q 002094 824 GDFGLARLLPMLDRCI--LSSKIQSALGYMAPEFACRTV-----KITEKCDVYGFGVLVLEVVTG----------KRPVE 886 (967)
Q Consensus 824 ~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----~~t~~~Dv~slGvll~elltg----------~~p~~ 886 (967)
+|||++.......... ......||+.|+|||.+.... .++.++||||||+++|||++| +.||.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 9999997664322211 234557899999999884332 234789999999999999999 77886
Q ss_pred CCccchHhHHHHHHhhhccCCchhhcchhhcCCC-----ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 887 YMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNF-----PADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
...........+...... ...+... ..+.+..+.+++.+|++.||++|||++|+++.|+++.++
T Consensus 269 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 269 DLVPSDPSVEEMRKVVCE---------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTSCSSCCHHHHHHHHTT---------SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccCcCcccHHHHHHHHHH---------HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 443322222222222111 1112222 235667899999999999999999999999999998765
No 197
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=349.82 Aligned_cols=266 Identities=14% Similarity=0.160 Sum_probs=207.3
Q ss_pred hccCCCCccCCCCceEEEEEEeCC---------CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceee---------
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD---------GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVA--------- 743 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 743 (967)
+.|+..+.||+|+||.||+|+... ++.||||.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 457888999999999999999763 789999998754 35889999999999999987
Q ss_pred ------eeeEEEc-CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC
Q 002094 744 ------LEGYYWT-PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID 816 (967)
Q Consensus 744 ------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~ 816 (967)
+++++.. ....++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+||+++
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK-HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD 193 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence 5677765 67889999999 9999999986522 2389999999999999999999999999999999999999
Q ss_pred CCC--CeEEeecccccccCCCccc-----cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCc
Q 002094 817 SSG--EPKVGDFGLARLLPMLDRC-----ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYME 889 (967)
Q Consensus 817 ~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~ 889 (967)
.++ .+||+|||+++........ .......||+.|+|||.+ .+..++.++||||||+++|||++|+.||....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH-KGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHH-ccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 988 8999999999876432211 112345789999999988 56678999999999999999999999998554
Q ss_pred cchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 890 DDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
................. ....+. .......+.++.+++.+|++.||++|||+++++++|+++.+...
T Consensus 273 ~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKP--GPFVGP---CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TCHHHHHHHHHHHHHSC--CCEECT---TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHhccCCh--hhhhhh---ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 33333333222221110 000000 00112345779999999999999999999999999999875543
No 198
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.4e-37 Score=344.60 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=200.8
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-----CCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-----HHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++.... .....+..|+++++.+. ||||+++++++...+..+
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 4578889999999999999996 468999999997432 34567788999998886 999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC------------------
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS------------------ 817 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~------------------ 817 (967)
+||||+ +++|.+++....... +++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~ 190 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNG-FHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK 190 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred EEEcCC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccc
Confidence 999999 889999998765433 889999999999999999999999999999999999975
Q ss_pred -------CCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCcc
Q 002094 818 -------SGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMED 890 (967)
Q Consensus 818 -------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~ 890 (967)
++.+||+|||++..... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||.....
T Consensus 191 ~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 264 (360)
T 3llt_A 191 IQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVI-LNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH 264 (360)
T ss_dssp EEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHH-cCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH
Confidence 78999999999986533 22356789999999998 566799999999999999999999999975443
Q ss_pred chHhHHHHHHhhhccCC-----------chhhcc-hhhcCCCC--------------------hhhHHHHHHHHHhhccC
Q 002094 891 DVVVLCDMVRGALEDGR-----------VEDCVD-ARLRGNFP--------------------ADEAIPVIKLGLICASQ 938 (967)
Q Consensus 891 ~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~--------------------~~~~~~l~~li~~cl~~ 938 (967)
. ..... +........ .....+ ......++ ......+.+++.+|++.
T Consensus 265 ~-~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 342 (360)
T 3llt_A 265 M-EHLAM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQI 342 (360)
T ss_dssp H-HHHHH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCS
T ss_pred H-HHHHH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcC
Confidence 2 11111 111111000 000000 00000011 11125688999999999
Q ss_pred CCCCCCCHHHHHH
Q 002094 939 VPSNRPDMEEVVN 951 (967)
Q Consensus 939 dP~~Rpt~~evl~ 951 (967)
||++|||++|+++
T Consensus 343 dP~~Rpta~elL~ 355 (360)
T 3llt_A 343 DPTLRPSPAELLK 355 (360)
T ss_dssp SGGGSCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999874
No 199
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.8e-37 Score=335.23 Aligned_cols=265 Identities=15% Similarity=0.164 Sum_probs=208.0
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEE-EcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYY-WTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++.++|++++..+.++ ...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 4578889999999999999996 5789999999876542 24589999999999988766666655 56677799999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC---CCCCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID---SSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~---~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+ +++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++ .++.+||+|||++.......
T Consensus 86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred ec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 99 8999999975433 389999999999999999999999999999999999994 78899999999998765422
Q ss_pred cc-----cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCcc--chHhHHHHHHhhhccCCch
Q 002094 837 RC-----ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMED--DVVVLCDMVRGALEDGRVE 909 (967)
Q Consensus 837 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 909 (967)
.. .......||+.|+|||.+ .+..++.++||||||+++|||++|+.||..... .......+........
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 238 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTH-LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--- 238 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC---
T ss_pred cccccccccccccccccccCChhhh-cCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc---
Confidence 21 123456789999999998 566789999999999999999999999975332 1112222222111110
Q ss_pred hhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCCCc
Q 002094 910 DCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLDGQ 963 (967)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 963 (967)
... .....+.++.+++.+|++.||++|||++++++.|+++.+.....
T Consensus 239 ---~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 239 ---IEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp ---HHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ---hHH----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 000 12334567999999999999999999999999999987655443
No 200
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.4e-37 Score=333.19 Aligned_cols=259 Identities=22% Similarity=0.357 Sum_probs=205.9
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-----ccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-----KSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|... +++.||+|.+...... ...+.+.+|++++++++||||+++++++..+...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 34688899999999999999976 6899999999765421 24678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC----CeEEeecccccc
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG----EPKVGDFGLARL 831 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~----~~kl~Dfg~a~~ 831 (967)
+||||+++++|.+++..... +++..+..++.|++.||+|||++|++||||||+||+++.++ .+||+|||.+..
T Consensus 85 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 99999999999999976433 89999999999999999999999999999999999998877 899999999986
Q ss_pred cCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh
Q 002094 832 LPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC 911 (967)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (967)
..... ......+++.|+|||.+ ....++.++||||+|+++|+|++|+.||...... .....+... ...
T Consensus 162 ~~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~-----~~~-- 229 (283)
T 3bhy_A 162 IEAGN---EFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAV-----NYD-- 229 (283)
T ss_dssp CC-----------CCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTT-----CCC--
T ss_pred ccCCC---cccccCCCcCccCccee-cCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-HHHHHhHhc-----ccC--
Confidence 64321 22345689999999988 6667899999999999999999999999754332 111111110 000
Q ss_pred cchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH--HHHhhcCC
Q 002094 912 VDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN--ILELIQSP 959 (967)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~--~L~~~~~~ 959 (967)
.... .....+..+.+++.+|++.||++|||+.|+++ .++.++..
T Consensus 230 ~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 230 FDEE----YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp CCHH----HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred Ccch----hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0000 11234567899999999999999999999987 45665543
No 201
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.4e-37 Score=341.75 Aligned_cols=263 Identities=19% Similarity=0.247 Sum_probs=196.2
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
.+.|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 345788999999999999999854 689999999976543 223456889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC-----CCCCeEEeecccccccC
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID-----SSGEPKVGDFGLARLLP 833 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~-----~~~~~kl~Dfg~a~~~~ 833 (967)
||+++ +|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++ .++.+||+|||++....
T Consensus 113 e~~~~-~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 113 EYAEN-DLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp ECCSE-EHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred ecCCC-CHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 99985 99999987554 88999999999999999999999999999999999994 45569999999998664
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh--
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC-- 911 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 911 (967)
.. ........+|+.|+|||.+.....++.++||||+||++|||++|+.||...... .....+... ........+
T Consensus 189 ~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 264 (329)
T 3gbz_A 189 IP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEV-LGLPDDTTWPG 264 (329)
T ss_dssp -------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH-HCCCCTTTSTT
T ss_pred Cc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHH-hCCCchhhhhh
Confidence 32 122334567999999999855566899999999999999999999999754432 222222221 111100000
Q ss_pred -cc-hhhcCC------------CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 912 -VD-ARLRGN------------FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 912 -~~-~~~~~~------------~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.. ...... .+...+.++.+++.+|++.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 000000 11224567899999999999999999999875
No 202
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.4e-37 Score=339.91 Aligned_cols=264 Identities=20% Similarity=0.314 Sum_probs=187.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|... +++.||||++.........+++.+|++++++++||||+++++++..++..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 45788889999999999999854 68999999987654444567789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 761 ISSGSLYKHLHDG-----SSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 761 ~~~gsL~~~l~~~-----~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+++++|.+++... .....+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||.+......
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 9999999998641 12234899999999999999999999999999999999999999999999999998766432
Q ss_pred cc---ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhc
Q 002094 836 DR---CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV 912 (967)
Q Consensus 836 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (967)
.. ........||+.|+|||.+.....++.++||||+|+++|||++|+.||......... ...... . .....
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~----~-~~~~~ 248 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQN----D-PPSLE 248 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH-HHHHTS----S-CCCTT
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH-HHHhcc----C-CCccc
Confidence 11 112234568999999998844456899999999999999999999999755443221 111111 0 00111
Q ss_pred chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 913 DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
............+.++.+++.+|++.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111112223445667999999999999999999999986
No 203
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.5e-37 Score=336.20 Aligned_cols=255 Identities=20% Similarity=0.311 Sum_probs=195.3
Q ss_pred ccCC-CCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNK-DCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~-~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+. .+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 3555 46899999999999995 478999999997654 34567899999999885 79999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC---eEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE---PKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~---~kl~Dfg~a~~~~~~~ 836 (967)
|+++++|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++. +||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp CCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred cCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 9999999999976543 889999999999999999999999999999999999988775 9999999987653211
Q ss_pred cc-----cccccccccccccCcccccC----cccCCcccchhhHHHHHHHHHcCCCCCCCCccchH---------hHHHH
Q 002094 837 RC-----ILSSKIQSALGYMAPEFACR----TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVV---------VLCDM 898 (967)
Q Consensus 837 ~~-----~~~~~~~gt~~y~aPE~~~~----~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~---------~~~~~ 898 (967)
.. .......||+.|+|||.+.. ...++.++||||+|+++|||++|+.||........ .....
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 11 11223458999999998832 24588999999999999999999999975432110 00000
Q ss_pred HHhhhccCCchhhcchhhcCCCC----hhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 899 VRGALEDGRVEDCVDARLRGNFP----ADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+...+... ...++ ...+..+.+++.+|++.||++|||++|+++
T Consensus 249 ~~~~i~~~----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 249 LFESIQEG----------KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHC----------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhcc----------CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11111111 01112 134567999999999999999999999986
No 204
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=346.07 Aligned_cols=253 Identities=14% Similarity=0.172 Sum_probs=204.5
Q ss_pred hccCCCCccCCCCceEEEEEE------eCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCC---CCceeeeeeEEEcCC
Q 002094 682 ALLNKDCELGRGGFGVVYRTI------LQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR---HHNLVALEGYYWTPS 752 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 752 (967)
+.|...+.||+|+||.||+|+ ..+++.||||++... ...++..|++++++++ |+||+++++++..++
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 456888899999999999994 456899999999754 3557888888888876 999999999999999
Q ss_pred ceeEEEEecCCCchhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC-----------CC
Q 002094 753 LQLLIYEFISSGSLYKHLHDGS--SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS-----------SG 819 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~-----------~~ 819 (967)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||++||+||||||+|||++. ++
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccC
Confidence 9999999999999999997522 2234899999999999999999999999999999999999998 89
Q ss_pred CeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHH
Q 002094 820 EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMV 899 (967)
Q Consensus 820 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 899 (967)
.+||+|||+++...............||+.|+|||++ .+..++.++|||||||++|||++|+.||........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------ 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML-SNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------ 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH-TTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHh-cCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------
Confidence 9999999999765433333444567799999999998 556799999999999999999999999853322100
Q ss_pred HhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCC-CCHHHHHHHHHhhcCC
Q 002094 900 RGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNR-PDMEEVVNILELIQSP 959 (967)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-pt~~evl~~L~~~~~~ 959 (967)
......+ .+ .....+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 294 -----------~~~~~~~-~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 -----------KPEGLFR-RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -----------EECSCCT-TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----------eechhcc-cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0011111 11 235668899999999999988 6888888888887654
No 205
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6e-37 Score=333.60 Aligned_cols=263 Identities=16% Similarity=0.172 Sum_probs=203.6
Q ss_pred hhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEE-EcCCceeEEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYY-WTPSLQLLIY 758 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 758 (967)
.+.|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+++++.++|++++..++++ ...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 45678899999999999999995 5789999998765442 23588899999999888777666655 5677789999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe---CCCCCeEEeecccccccCCC
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI---DSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill---~~~~~~kl~Dfg~a~~~~~~ 835 (967)
||+ +++|.+++..... .+++..+..++.|++.||+|||++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 85 e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp ECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred Ecc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 999 8999999985433 28999999999999999999999999999999999999 78899999999999876542
Q ss_pred ccc-----cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccc--hHhHHHHHHhhhccCCc
Q 002094 836 DRC-----ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDD--VVVLCDMVRGALEDGRV 908 (967)
Q Consensus 836 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 908 (967)
... .......||+.|+|||.+ ....++.++||||+|+++|||++|+.||...... ...............
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTH-LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred ccCccCCCCcccccCCCccccchHHh-cCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--
Confidence 221 123356789999999998 5667899999999999999999999999754321 111111111111100
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
... .....+.++.+++.+|++.||++|||++++++.|+++.+..
T Consensus 239 ----~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 239 ----IEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp ----HHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----hhh----hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 000 11234567999999999999999999999999999887543
No 206
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-37 Score=344.02 Aligned_cols=267 Identities=21% Similarity=0.240 Sum_probs=203.8
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCC----ccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSG----LIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
.+.|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 345788999999999999999964 68899999986542 1345678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcCCC-------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Q 002094 756 LIYEFISSGSLYKHLHDGSS-------------------------------------RNCLSWRQRFNIILGMAKGLAYL 798 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~~~~~~~~~i~~~i~~aL~~L 798 (967)
+||||+++|+|.+++..... ...+++..++.++.||+.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999852110 11135677889999999999999
Q ss_pred hcCCcccCCCCCCCEEeCCCC--CeEEeecccccccCCCcc--ccccccccccccccCcccccC-cccCCcccchhhHHH
Q 002094 799 HHTNIIHYNLKSTNVLIDSSG--EPKVGDFGLARLLPMLDR--CILSSKIQSALGYMAPEFACR-TVKITEKCDVYGFGV 873 (967)
Q Consensus 799 H~~~ivH~Dik~~Nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~t~~~Dv~slGv 873 (967)
|+++|+||||||+||+++.++ .+||+|||++........ ........||+.|+|||.+.. ...++.++||||+|+
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 999999999999999998776 899999999986533211 112345678999999998843 367889999999999
Q ss_pred HHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH--
Q 002094 874 LVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN-- 951 (967)
Q Consensus 874 ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~-- 951 (967)
++|||++|+.||........ .......... .........+..+.+++.+|++.||++|||+.|+++
T Consensus 265 il~el~~g~~pf~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp 332 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVNDADT-ISQVLNKKLC-----------FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332 (345)
T ss_dssp HHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC-----------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSH
T ss_pred HHHHHHHCCCCCCCCChHHH-HHHHHhcccc-----------cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCh
Confidence 99999999999975543321 1111111100 001111234667999999999999999999999987
Q ss_pred HHHhhcCC
Q 002094 952 ILELIQSP 959 (967)
Q Consensus 952 ~L~~~~~~ 959 (967)
.++++...
T Consensus 333 ~~~~~~~~ 340 (345)
T 3hko_A 333 WISQFSDK 340 (345)
T ss_dssp HHHTTSSC
T ss_pred hhccChHh
Confidence 34554443
No 207
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.4e-37 Score=337.63 Aligned_cols=261 Identities=27% Similarity=0.412 Sum_probs=198.8
Q ss_pred hccCCCCccCCCCceEEEEEEeC--CCc--EEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ--DGR--SVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 755 (967)
+.|+..+.||+|+||.||+|++. +++ .||||++..... ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 34688889999999999999853 233 689999875532 234578999999999999999999999997654 88
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+||||+++++|.+++..... .+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 99999999999999976432 3889999999999999999999999999999999999999999999999999876542
Q ss_pred ccc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 836 DRC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 836 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
... .......+++.|+|||.+ ....++.++||||+|+++|||++ |+.||....... .......
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~--------- 239 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESL-KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-----ILHKIDK--------- 239 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHT---------
T ss_pred ccchhhhccCCCCceeeCchhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-----HHHHHHc---------
Confidence 221 123345677889999988 55678899999999999999999 999997554321 1111111
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
.......+...+.++.+++.+|++.||++|||+.++++.|+++....
T Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 11122334566778999999999999999999999999999887543
No 208
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-37 Score=343.32 Aligned_cols=250 Identities=22% Similarity=0.350 Sum_probs=198.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+++..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45788899999999999999965 688999999976542 245688888777 79999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC-C---CeEEeecccccccCCC
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS-G---EPKVGDFGLARLLPML 835 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~-~---~~kl~Dfg~a~~~~~~ 835 (967)
|+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||++..+ + .+||+|||++......
T Consensus 97 ~~~gg~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 97 LMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CCCSCBHHHHHHTCTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 9999999999976543 8999999999999999999999999999999999998533 3 4999999999866432
Q ss_pred ccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 836 DRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
. .......||+.|+|||++ ....++.++||||+||++|||++|+.||.....+.. .++.... ..+.. .
T Consensus 174 ~--~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~i-~~~~~------~ 241 (342)
T 2qr7_A 174 N--GLLMTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP--EEILARI-GSGKF------S 241 (342)
T ss_dssp T--CCBCCSSCCSSCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH--HHHHHHH-HHCCC------C
T ss_pred C--CceeccCCCccccCHHHh-cCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH--HHHHHHH-ccCCc------c
Confidence 2 223345689999999998 555688999999999999999999999975322111 1111111 11110 1
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.....+...+.++.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112233456778999999999999999999999876
No 209
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.3e-37 Score=338.65 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=202.0
Q ss_pred hccCCC-CccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKD-CELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
++|... +.||+|+||.||+|... +++.||||++..... ......+.+|+.+++++ .||||+++++++..++..++|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 344555 78999999999999965 689999999976543 34467899999999999 569999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecccccccCC
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFGLARLLPM 834 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg~a~~~~~ 834 (967)
|||+++|+|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++. ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp EECCTTEEGGGGGSSCC-C-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred EEecCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 9999999999998654333 3899999999999999999999999999999999999987 78999999999987643
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
. .......||+.|+|||.+ ....++.++||||+|+++|||++|+.||........ ...+... ..
T Consensus 187 ~---~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~-----------~~ 250 (327)
T 3lm5_A 187 A---CELREIMGTPEYLAPEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQV-----------NV 250 (327)
T ss_dssp ----------CCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHT-----------CC
T ss_pred c---cccccccCCcCccCCeee-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHhc-----------cc
Confidence 2 223346789999999998 666889999999999999999999999975443211 1111111 01
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..........+..+.+++.+|++.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11122234556779999999999999999999998753
No 210
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.8e-37 Score=329.54 Aligned_cols=248 Identities=22% Similarity=0.343 Sum_probs=196.8
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.|+..+.||+|+||.||+|... +|+.||||.+..... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4677889999999999999976 789999999975431 2345689999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++++|.+++..... +++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+...... .
T Consensus 92 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~---~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---E 165 (276)
T ss_dssp CCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred ccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC---c
Confidence 9999999999976543 889999999999999999999999999999999999999999999999999866432 1
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCC
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGN 919 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (967)
......+++.|+|||.+......+.++||||+|+++|+|++|+.||...... . ..+.+.. . ...
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~-~~~~~~~----~----------~~~ 229 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-T-LFKKIRG----G----------VFY 229 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-H-HHHHHHH----C----------CCC
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-H-HHHHhhc----C----------ccc
Confidence 2234568899999999844434478999999999999999999999754322 1 1111110 0 112
Q ss_pred CChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 920 FPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 920 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
.+...+..+.+++.+|++.||++|||++|+++.
T Consensus 230 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 344556779999999999999999999999873
No 211
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=345.41 Aligned_cols=256 Identities=24% Similarity=0.331 Sum_probs=204.7
Q ss_pred hccCCCCccCCCCceEEEEEEe----CCCcEEEEEEeecCCc---cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL----QDGRSVAIKKLTVSGL---IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 753 (967)
+.|+..+.||+|+||.||+++. .+++.||||++..... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 3468889999999999999997 3689999999865431 22345678899999999 69999999999999999
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.++||||+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999976543 8899999999999999999999999999999999999999999999999998654
Q ss_pred CCccccccccccccccccCcccccC-cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhc
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACR-TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV 912 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (967)
.. .........||+.|+|||++.. ...++.++|||||||++|||++|+.||....... ....+......
T Consensus 211 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~-------- 280 (355)
T 1vzo_A 211 AD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILK-------- 280 (355)
T ss_dssp GG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHH--------
T ss_pred cC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhc--------
Confidence 32 2222335678999999999843 2457899999999999999999999997432211 11122221111
Q ss_pred chhhcCCCChhhHHHHHHHHHhhccCCCCCCC-----CHHHHHHHH
Q 002094 913 DARLRGNFPADEAIPVIKLGLICASQVPSNRP-----DMEEVVNIL 953 (967)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~L 953 (967)
....++...+..+.+++.+|++.||++|| |++|+++..
T Consensus 281 ---~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 281 ---SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 12334566677899999999999999999 999987643
No 212
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.3e-37 Score=332.33 Aligned_cols=247 Identities=27% Similarity=0.403 Sum_probs=198.9
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEc----CCceeE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWT----PSLQLL 756 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 756 (967)
.|...+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4667778999999999999964 578999999976543 3345779999999999999999999998864 355789
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCEEeC-CCCCeEEeecccccccC
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN--IIHYNLKSTNVLID-SSGEPKVGDFGLARLLP 833 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--ivH~Dik~~Nill~-~~~~~kl~Dfg~a~~~~ 833 (967)
||||+++++|.+++..... +++..++.++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHccC---CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999999976433 889999999999999999999998 99999999999997 78999999999997543
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
.. ......|++.|+|||.+ . +.++.++||||+|+++|+|++|+.||............ ......
T Consensus 184 ~~----~~~~~~~t~~y~aPE~~-~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~----~~~~~~------ 247 (290)
T 1t4h_A 184 AS----FAKAVIGTPEFMAPEMY-E-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR----VTSGVK------ 247 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGG-G-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH----HTTTCC------
T ss_pred cc----ccccccCCcCcCCHHHH-h-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH----HhccCC------
Confidence 21 22345689999999987 3 45899999999999999999999999754443222111 111000
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....+...+.++.+++.+|++.||++|||++|+++
T Consensus 248 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 248 ---PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 01122333457999999999999999999999875
No 213
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.5e-37 Score=352.52 Aligned_cols=254 Identities=21% Similarity=0.304 Sum_probs=192.2
Q ss_pred HhhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-------cccHHHHHHHHHHHcCCCCCceeeeeeEEEcC
Q 002094 680 ANALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-------IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP 751 (967)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 751 (967)
..+.|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 3456788999999999999999965 589999999975431 1122358899999999999999999999854
Q ss_pred CceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC---CeEEeeccc
Q 002094 752 SLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG---EPKVGDFGL 828 (967)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~---~~kl~Dfg~ 828 (967)
+..++||||+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred CceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence 557999999999999999876543 89999999999999999999999999999999999997544 599999999
Q ss_pred ccccCCCccccccccccccccccCcccccC--cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccC
Q 002094 829 ARLLPMLDRCILSSKIQSALGYMAPEFACR--TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDG 906 (967)
Q Consensus 829 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (967)
++.... ........||+.|+|||++.. ...++.++||||+|+++|||++|+.||............+.. +
T Consensus 289 a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~-----~ 360 (419)
T 3i6u_A 289 SKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS-----G 360 (419)
T ss_dssp TTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT-----T
T ss_pred ceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc-----C
Confidence 987643 222345678999999998742 456788999999999999999999999754332221111111 1
Q ss_pred CchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 907 RVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.... .+. .....+..+.+++.+|++.||++|||++|+++
T Consensus 361 ~~~~--~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 361 KYNF--IPE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCCC--CHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC--Cch----hhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0000 000 01234567999999999999999999999876
No 214
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.8e-37 Score=344.20 Aligned_cols=260 Identities=21% Similarity=0.335 Sum_probs=205.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|... +++.||+|++.........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 34678889999999999999966 68999999998765445567899999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
+++++|.+++..... +++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++..... .
T Consensus 113 ~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~ 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 185 (360)
T ss_dssp CTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----H
T ss_pred CCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc----c
Confidence 999999999976543 88999999999999999999996 999999999999999999999999999875422 1
Q ss_pred ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhh-----------------
Q 002094 840 LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGA----------------- 902 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~----------------- 902 (967)
......||+.|+|||.+ ....++.++||||+|+++|||++|+.||.......... .....
T Consensus 186 ~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERL-QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL--MFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp C----CCCCTTCCHHHH-TTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHH--HHC-------------------
T ss_pred cccCCCCCCCeECHHHH-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhcccccccCCCCCCCcccCCC
Confidence 22345789999999998 56678999999999999999999999997544322111 00000
Q ss_pred ---------hccCCchhhcchhhc---CC-CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 903 ---------LEDGRVEDCVDARLR---GN-FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 903 ---------~~~~~~~~~~~~~~~---~~-~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.......+..+.... .. .....+.++.+++.+|++.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000001111111111 11 12235667999999999999999999999976
No 215
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5.2e-37 Score=332.78 Aligned_cols=246 Identities=17% Similarity=0.271 Sum_probs=200.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|... +++.||||++..... .....++.+|+..+.++ +||||+++++++.+++..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 44688899999999999999976 799999999976532 33456788999999998 9999999999999999999999
Q ss_pred EecCCCchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC-------------------
Q 002094 759 EFISSGSLYKHLHDGSS-RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS------------------- 818 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~-~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~------------------- 818 (967)
||+++++|.+++..... ...+++..++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------C
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 99999999999976421 1238999999999999999999999999999999999999844
Q ss_pred CCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHH
Q 002094 819 GEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 819 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~ 898 (967)
..+||+|||.+...... ....||+.|+|||.+.....++.++||||+|+++|||++|.+|+..... ...+
T Consensus 171 ~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~ 240 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----WHEI 240 (289)
T ss_dssp CCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----HHHH
T ss_pred eEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----HHHH
Confidence 47999999999866431 2345899999999985555677899999999999999999987643211 1111
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. . ......+...+.++.+++.+|++.||++|||+.|+++
T Consensus 241 ~-----~---------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 241 R-----Q---------GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp H-----T---------TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H-----c---------CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 1 1122345556778999999999999999999999875
No 216
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.3e-37 Score=333.61 Aligned_cols=249 Identities=21% Similarity=0.299 Sum_probs=206.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|...+.||+|+||.||++... +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45788899999999999999976 578999999876532 234567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 95 e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-- 169 (294)
T ss_dssp ECCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred ecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc--
Confidence 99999999999876433 8899999999999999999999999999999999999999999999999998664321
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
.......|++.|+|||.+ ....++.++||||+|+++|||++|+.||........ ...+. .. ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~-----~~----------~~ 232 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRIK-----KN----------EY 232 (294)
T ss_dssp CCBCCCCSCCSSCCHHHH-TTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHH-----TT----------CC
T ss_pred cccccccCCCCcCCcchh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHh-----hc----------cC
Confidence 223446689999999998 566789999999999999999999999975443211 11111 00 11
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..+...+..+.+++.+|++.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2344556779999999999999999999999863
No 217
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.1e-37 Score=355.23 Aligned_cols=250 Identities=24% Similarity=0.321 Sum_probs=204.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|...+.||+|+||.||+|+.+ +|+.||+|++..... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 34567788999999999999975 689999999975432 234567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 759 EFISSGSLYKHLHDGSS-RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~-~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
||++||+|.+++..... ...+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~- 343 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ- 343 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC-
Confidence 99999999999976542 2348999999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
.......||+.|+|||++ .+..++.++||||+||++|||++|+.||....... ...++...... ..
T Consensus 344 -~~~~~~~GT~~Y~APE~l-~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~-----------~~ 409 (543)
T 3c4z_A 344 -TKTKGYAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLE-----------QA 409 (543)
T ss_dssp -CCBCCCCSCTTTSCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHH-----------CC
T ss_pred -cccccccCCccccChhhh-cCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhh-----------cc
Confidence 123345799999999998 55678999999999999999999999997543211 11111111111 01
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
..++...+..+.+++.+|++.||++||++
T Consensus 410 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 410 VTYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred cCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 23456667789999999999999999975
No 218
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.4e-37 Score=331.19 Aligned_cols=254 Identities=24% Similarity=0.369 Sum_probs=208.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 34688889999999999999965 578899999865432 223567999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+......
T Consensus 94 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---
T ss_pred EeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc---
Confidence 99999999999976543 889999999999999999999999999999999999999999999999998765431
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
......|++.|+|||.+ ....++.++||||+|+++|||++|+.||........ ...+. . ...
T Consensus 168 -~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~----~-----------~~~ 229 (284)
T 2vgo_A 168 -RRRTMCGTLDYLPPEMI-EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRRIV----N-----------VDL 229 (284)
T ss_dssp -CBCCCCSCGGGCCHHHH-TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHH----T-----------TCC
T ss_pred -ccccccCCCCcCCHHHh-ccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHHHh----c-----------ccc
Confidence 22345689999999998 566789999999999999999999999975433211 11111 0 112
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH--HHHhhcCC
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN--ILELIQSP 959 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~--~L~~~~~~ 959 (967)
.++...+..+.+++.+|++.||++|||++|+++ .++...+.
T Consensus 230 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~ 272 (284)
T 2vgo_A 230 KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272 (284)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCC
T ss_pred CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccc
Confidence 344556678999999999999999999999986 44444433
No 219
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.2e-36 Score=339.62 Aligned_cols=265 Identities=22% Similarity=0.268 Sum_probs=201.4
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEc--------C
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWT--------P 751 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------~ 751 (967)
+.|+..+.||+|+||.||+|+. .+|+.||||++..... ......+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 3478889999999999999997 4789999999866543 2334678899999999999999999999876 3
Q ss_pred CceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccc
Q 002094 752 SLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARL 831 (967)
Q Consensus 752 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~ 831 (967)
+..++||||+++ +|.+.+..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 467899999986 77777765433 289999999999999999999999999999999999999999999999999987
Q ss_pred cCCCc--cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccC---
Q 002094 832 LPMLD--RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDG--- 906 (967)
Q Consensus 832 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 906 (967)
..... .........||+.|+|||.+.....++.++||||+|+++|||++|+.||....... ....+. ......
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~-~~~~~~~~~ 251 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALIS-QLCGSITPE 251 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH-HHHCCCCTT
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH-HHhCCCChh
Confidence 64322 12223456789999999988555678999999999999999999999997544322 122221 111111
Q ss_pred CchhhcchhhcC-------CC-C-h------hhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 907 RVEDCVDARLRG-------NF-P-A------DEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 907 ~~~~~~~~~~~~-------~~-~-~------~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
............ .. . . ..+..+.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 011100000000 00 0 0 11355889999999999999999999886
No 220
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.2e-37 Score=334.70 Aligned_cols=253 Identities=21% Similarity=0.273 Sum_probs=189.5
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCcccc-HHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKS-QEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|.. .+|+.||||++........ .+.+.++...++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 4468888999999999999996 4789999999976543333 3344555556888899999999999999999999999
Q ss_pred ecCCCchhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 760 FISSGSLYKHLHDG-SSRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 760 ~~~~gsL~~~l~~~-~~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|+++ +|.+++... .....+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus 87 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 163 (290)
T 3fme_A 87 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD-- 163 (290)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred hhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc--
Confidence 9975 887777542 1122389999999999999999999998 9999999999999999999999999999766432
Q ss_pred ccccccccccccccCcccc---cCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 838 CILSSKIQSALGYMAPEFA---CRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~---~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
.......||+.|+|||.+ .....++.++||||+|+++|||++|+.||+............+...
T Consensus 164 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 230 (290)
T 3fme_A 164 -VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP------------ 230 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC------------
T ss_pred -ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC------------
Confidence 223345689999999986 2456789999999999999999999999976544433332222211
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.....+...+.++.+++.+|++.||++|||++|+++
T Consensus 231 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 -SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111122345667999999999999999999999987
No 221
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=338.79 Aligned_cols=264 Identities=22% Similarity=0.250 Sum_probs=201.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccc----cHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIK----SQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLL 756 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 756 (967)
+.|+..+.||+|+||.||+|+.. +|+.||||++....... ....+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 45788899999999999999965 58999999997543211 12468899999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
||||+++ +|.+++..... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 v~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp EEECCSE-EHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred EEEcCCC-CHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 9999986 88888876432 37889999999999999999999999999999999999999999999999998664322
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch--
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA-- 914 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 914 (967)
.......+|+.|+|||.+.....++.++||||+|+++|||++|.+||...... ..+..+.... .......+.+.
T Consensus 167 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 167 --RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETL-GTPTEEQWPDMCS 242 (346)
T ss_dssp --CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-CCCCTTTSSSTTS
T ss_pred --ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHc-CCCChhhhhhhcc
Confidence 22345678999999999855556899999999999999999999999754432 2223332221 11111111110
Q ss_pred -------hhcCCC-----ChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 915 -------RLRGNF-----PADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 915 -------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
...... ....+.++.+++.+|++.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000001 13445779999999999999999999999864
No 222
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.8e-37 Score=344.76 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=200.4
Q ss_pred ccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHH-HcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 683 LLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKT-LGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
.|+..+.||+|+||.||+|.. .+|+.||||++..........++..|..+ ++.++||||+++++++..++..++||||
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 456778899999999999996 47899999999776544445566666665 7888999999999999999999999999
Q ss_pred cCCCchhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 761 ISSGSLYKHLHDGS-SRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 761 ~~~gsL~~~l~~~~-~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
+++ +|.+++.... ....+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--- 207 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--- 207 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH---
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc---
Confidence 986 9988886421 122389999999999999999999987 9999999999999999999999999999766431
Q ss_pred cccccccccccccCccccc---CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 839 ILSSKIQSALGYMAPEFAC---RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~---~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
.......||+.|+|||++. ....++.++||||||+++|||++|+.||.........+...+...
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~------------- 274 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP------------- 274 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-------------
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCC-------------
Confidence 1223356899999999862 334688999999999999999999999975444333222222111
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.....+...+.++.+++.+|++.||++|||+.|+++
T Consensus 275 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 275 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 011112345677999999999999999999999986
No 223
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-36 Score=335.75 Aligned_cols=256 Identities=18% Similarity=0.221 Sum_probs=203.2
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEEc--CCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYWT--PSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 4578889999999999999985 57899999998743 3577999999999997 9999999999987 5678999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC-CeEEeecccccccCCCc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG-EPKVGDFGLARLLPMLD 836 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~-~~kl~Dfg~a~~~~~~~ 836 (967)
|||+++++|.+++.. +++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|||+++......
T Consensus 112 ~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp EECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred EeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 999999999999854 78899999999999999999999999999999999999776 89999999998664322
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc---
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD--- 913 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 913 (967)
......+++.|+|||.+.....++.++||||+|+++|||++|+.||.........+..+....- .....+..+
T Consensus 186 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~ 261 (330)
T 3nsz_A 186 ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG-TEDLYDYIDKYN 261 (330)
T ss_dssp ---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC-HHHHHHHHHHTT
T ss_pred ---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC-CchhhhHHHHhc
Confidence 2344568889999999855577899999999999999999999999655444333333222110 000000000
Q ss_pred --------------------hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 914 --------------------ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 914 --------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.......+...+.++.+++.+|++.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00111122335678999999999999999999999986
No 224
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5e-37 Score=347.58 Aligned_cols=244 Identities=21% Similarity=0.279 Sum_probs=187.4
Q ss_pred CCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHc-CCCCCceeeeeeEEEc----CCceeEEEEe
Q 002094 687 DCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLG-KIRHHNLVALEGYYWT----PSLQLLIYEF 760 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~----~~~~~lv~e~ 760 (967)
.+.||+|+||.||++..+ +++.||||++... ..+.+|++++. ..+||||+++++++.. ....++||||
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~ 140 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 140 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence 368999999999999965 6899999998632 35778888864 4589999999998865 5668999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecccccccCCCcc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg~a~~~~~~~~ 837 (967)
+++|+|.+++...... .+++..+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 141 ~~gg~L~~~l~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-- 217 (400)
T 1nxk_A 141 LDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-- 217 (400)
T ss_dssp CCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CCCCcHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC--
Confidence 9999999999875432 3899999999999999999999999999999999999987 789999999999865421
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchH---hHHHHHHhhhccCCchhhcch
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVV---VLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 914 (967)
.......||+.|+|||++ ....++.++|||||||++|||++|+.||........ ....+..+..
T Consensus 218 -~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~----------- 284 (400)
T 1nxk_A 218 -NSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY----------- 284 (400)
T ss_dssp ----------CTTCCGGGS-CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC-----------
T ss_pred -CccccCCCCCCccCHhhc-CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc-----------
Confidence 223456689999999998 667899999999999999999999999974432110 1111111100
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..........+.++.+++.+|++.||++|||++|+++.
T Consensus 285 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00111123456779999999999999999999999874
No 225
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-36 Score=352.01 Aligned_cols=266 Identities=20% Similarity=0.216 Sum_probs=188.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcC-----Cce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP-----SLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 754 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++..... ....+++.+|++++++++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 45788999999999999999855 689999999965432 33457899999999999999999999998533 568
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||+. ++|.+++..... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPVY---LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcccCCC---CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999985 699999876543 89999999999999999999999999999999999999999999999999987643
Q ss_pred Cccc-------------------------cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc---------
Q 002094 835 LDRC-------------------------ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT--------- 880 (967)
Q Consensus 835 ~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt--------- 880 (967)
.... .......||+.|+|||++.....++.++||||+||++|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 2111 122345679999999987566779999999999999999999
Q ss_pred --CCCCCCCCccc------------------hHhHHHHHHhhhccCCchhh-----------cch---hh---cCCCChh
Q 002094 881 --GKRPVEYMEDD------------------VVVLCDMVRGALEDGRVEDC-----------VDA---RL---RGNFPAD 923 (967)
Q Consensus 881 --g~~p~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~-----------~~~---~~---~~~~~~~ 923 (967)
|+++|...... .......+...+.......+ ... .. .....+.
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 66666432210 00111111111111110000 000 00 0001133
Q ss_pred hHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 924 EAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 924 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+.++.+|+.+|+..||++|||++|+++
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~ 396 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLA 396 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 4677999999999999999999999987
No 226
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.2e-37 Score=338.81 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=206.5
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
.+.|...+.||+|+||.||++... +++.||+|++..... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 345788899999999999999965 478999999876532 23457789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++++|.+++..... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EecCCCCCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-
Confidence 999999999999876433 8999999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
.......|++.|+|||.+ ....++.++||||||+++|||++|+.||........ ...+... .
T Consensus 196 -~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~---------------~ 257 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRIKKN---------------E 257 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHH-HTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHT---------------C
T ss_pred -ccccccCCCccccCHHHh-ccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHhcC---------------C
Confidence 223456689999999998 556789999999999999999999999975433211 1111110 1
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+...+..+.+++.+|++.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 258 YSIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1234455677999999999999999999999986
No 227
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.5e-36 Score=331.79 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=202.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|...+.||+|+||.||+++.. +|+.||+|.+.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 44688899999999999999965 68999999998654 23446789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe---CCCCCeEEeecccccccCCCcc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI---DSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill---~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
+++++|.+++..... +++..+..++.|++.||+|||++||+||||||+||++ +.++.++|+|||++.....
T Consensus 88 ~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~--- 161 (304)
T 2jam_A 88 VSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN--- 161 (304)
T ss_dssp CCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---
T ss_pred CCCccHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---
Confidence 999999999876443 8899999999999999999999999999999999999 7888999999999875432
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
.......|++.|+|||.+ ....++.++||||+|+++|||++|+.||...... .....+..+.. ...
T Consensus 162 -~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~-----------~~~ 227 (304)
T 2jam_A 162 -GIMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYY-----------EFE 227 (304)
T ss_dssp -BTTHHHHSCCCBCCTTTB-SSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHCCC-----------CCC
T ss_pred -CccccccCCCCccChHHh-ccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCC-----------CCC
Confidence 122345688999999998 5667899999999999999999999999754322 11111111110 011
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.......+..+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1233456678999999999999999999999986
No 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=339.68 Aligned_cols=260 Identities=23% Similarity=0.375 Sum_probs=200.3
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|+..+.||+|+||.||+|..+. .||+|++..... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~ 110 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL 110 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence 346888999999999999998753 499999876532 23345688999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc---c
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD---R 837 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~---~ 837 (967)
+++++|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++ ++.+||+|||++....... .
T Consensus 111 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 111 CKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp CCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred ccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 999999999976542 388999999999999999999999999999999999998 6899999999987553211 1
Q ss_pred ccccccccccccccCcccccC--------cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCch
Q 002094 838 CILSSKIQSALGYMAPEFACR--------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVE 909 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~--------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (967)
........|++.|+|||.+.. ...++.++||||||+++|||++|+.||........ ..... . ..
T Consensus 188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~----~-~~-- 259 (319)
T 2y4i_B 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMG----T-GM-- 259 (319)
T ss_dssp CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHHHH----T-TC--
T ss_pred ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhc----c-CC--
Confidence 122234558899999998843 24578899999999999999999999975543211 11111 0 00
Q ss_pred hhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCC
Q 002094 910 DCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPL 960 (967)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 960 (967)
. ....+...+.++.+++.+|++.||++|||+++++++|+++.+..
T Consensus 260 ---~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 ---K---PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp ---C---CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ---C---CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 0 00111234456999999999999999999999999999988654
No 229
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=342.81 Aligned_cols=257 Identities=24% Similarity=0.291 Sum_probs=189.0
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEE--------cCC
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYW--------TPS 752 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~~ 752 (967)
.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++++. ||||+++++++. ...
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 5788899999999999999964 68999999986554 344567899999999996 999999999984 334
Q ss_pred ceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN--IIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~--ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
..++||||+. |+|.+++........+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||++.
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 4789999996 699998876433345899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCcccc----------ccccccccccccCccccc--CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHH
Q 002094 831 LLPMLDRCI----------LSSKIQSALGYMAPEFAC--RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDM 898 (967)
Q Consensus 831 ~~~~~~~~~----------~~~~~~gt~~y~aPE~~~--~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~ 898 (967)
......... ......||+.|+|||.+. ....++.++||||||+++|||++|+.||...... .+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~ 261 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-----RI 261 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-----Hh
Confidence 764322211 111345889999999873 3456889999999999999999999999643221 11
Q ss_pred HHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCC
Q 002094 899 VRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSP 959 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~ 959 (967)
.........+...+..+.+++.+|++.||++|||++|+++.|+++...
T Consensus 262 -------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 262 -------------VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp -----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111122233345588999999999999999999999999988643
No 230
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.4e-36 Score=329.38 Aligned_cols=264 Identities=22% Similarity=0.293 Sum_probs=202.0
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
.|+..+.||+|+||.||+|+.+ +|+.||||++..... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 4677889999999999999975 689999999875532 22346788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCIL 840 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 840 (967)
++ ++|.+++....... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 84 ~~-~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~ 159 (299)
T 2r3i_A 84 LH-QDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RT 159 (299)
T ss_dssp CS-EEHHHHHHHTTTTC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS--BC
T ss_pred cc-CCHHHHHHhhhccC-CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc--cc
Confidence 98 59999998654333 8899999999999999999999999999999999999999999999999997654321 22
Q ss_pred cccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCC--chhhcc-hhhc
Q 002094 841 SSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGR--VEDCVD-ARLR 917 (967)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~ 917 (967)
.....+++.|+|||.+.....++.++||||+|+++|||++|+.||...... .....+....-.... ...... +...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 334567899999999855555899999999999999999999999754432 222222222111000 000000 0001
Q ss_pred CCC-----------ChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNF-----------PADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~-----------~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+ ....+.++.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 011 1234567899999999999999999999987
No 231
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.2e-37 Score=333.90 Aligned_cols=255 Identities=21% Similarity=0.338 Sum_probs=203.7
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEE--cCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYW--TPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv 757 (967)
+.|+..+.||+|+||.||++... +++.||+|.+..... ....+.+.+|++++++++||||+++++++. .....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 34678889999999999999965 689999999976543 334567999999999999999999999875 35678999
Q ss_pred EEecCCCchhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCC-----cccCCCCCCCEEeCCCCCeEEeecccccc
Q 002094 758 YEFISSGSLYKHLHDGSS-RNCLSWRQRFNIILGMAKGLAYLHHTN-----IIHYNLKSTNVLIDSSGEPKVGDFGLARL 831 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~i~~~i~~aL~~LH~~~-----ivH~Dik~~Nill~~~~~~kl~Dfg~a~~ 831 (967)
|||+++++|.+++..... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.+..
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 999999999999975322 224899999999999999999999998 99999999999999999999999999976
Q ss_pred cCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh
Q 002094 832 LPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC 911 (967)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (967)
..... .......|++.|+|||.+ ....++.++||||+|+++|||++|+.||...... . ....+ ..+
T Consensus 166 ~~~~~--~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~-~~~~i----~~~----- 231 (279)
T 2w5a_A 166 LNHDT--SFAKTFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-E-LAGKI----REG----- 231 (279)
T ss_dssp C---C--HHHHHHHSCCTTCCHHHH-HCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-H-HHHHH----HHT-----
T ss_pred ecccc--ccccccCCCccccChHHh-ccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-H-HHHHH----hhc-----
Confidence 54321 112345688999999998 5557899999999999999999999999754322 1 11111 111
Q ss_pred cchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHH
Q 002094 912 VDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILE 954 (967)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 954 (967)
.....+...+.++.+++.+|++.||++|||++|+++.+.
T Consensus 232 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 232 ----KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ----ccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 112334556778999999999999999999999987654
No 232
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.5e-37 Score=346.97 Aligned_cols=261 Identities=21% Similarity=0.286 Sum_probs=197.6
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc------ee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL------QL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~ 755 (967)
..|+..+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+. .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 35788899999999999999988788899999865432 22479999999999999999999865433 67
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC-CCCCeEEeecccccccCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID-SSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~-~~~~~kl~Dfg~a~~~~~ 834 (967)
+||||++++.+....+.......+++..+..++.||+.||+|||++||+||||||+||+++ .++.+||+|||+++....
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9999998754444333222223489999999999999999999999999999999999998 799999999999987643
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh---
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC--- 911 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 911 (967)
.. ......+|+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+..++... ..+....+
T Consensus 195 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~-g~p~~~~~~~~ 269 (394)
T 4e7w_A 195 GE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVL-GTPSREQIKTM 269 (394)
T ss_dssp TC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-CCCCHHHHHHH
T ss_pred CC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-CCCCHHHHHhh
Confidence 22 2335668999999998856667999999999999999999999999754432 2222332211 11110000
Q ss_pred ------------cchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 912 ------------VDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 912 ------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
........++...+.++.+++.+|++.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000111233456789999999999999999999999863
No 233
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.9e-37 Score=366.24 Aligned_cols=257 Identities=26% Similarity=0.355 Sum_probs=207.2
Q ss_pred hccCCCCccCCCCceEEEEEEeCC----CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQD----GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|.... +..||||++.........+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 446778899999999999999642 46799999876554445578999999999999999999999985 4668999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~- 545 (656)
T 2j0j_A 469 MELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST- 545 (656)
T ss_dssp EECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc-
Confidence 999999999999986532 38899999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
........+++.|+|||.+ ....++.++||||||+++|||++ |..||........ . ..+. ...
T Consensus 546 ~~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~-~~i~-------------~~~ 609 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-I-GRIE-------------NGE 609 (656)
T ss_dssp --------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-H-HHHH-------------HTC
T ss_pred ceeccCCCCCcceeCHHHh-cCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH-H-HHHH-------------cCC
Confidence 1222344567889999998 56688999999999999999997 9999975443211 1 1111 111
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
+...+..++..+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 233456677889999999999999999999999999998863
No 234
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-36 Score=353.39 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=203.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||+||+|+.+ +++.||||++..... ......+.+|++++++++||||+++++++.++...++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45788999999999999999965 689999999965432 3456789999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC---CCCCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID---SSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~---~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+++|+|.+.+..... +++..+..++.||+.||+|||++||+||||||+||+++ .++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 177 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177 (486)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-
Confidence 9999999999876543 89999999999999999999999999999999999995 4567999999999866432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......||+.|+|||++. +.++.++||||+||++|+|++|++||...... .....+..+... .
T Consensus 178 --~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~-----------~ 241 (486)
T 3mwu_A 178 --TKMKDRIGTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKYA-----------F 241 (486)
T ss_dssp ------CCTTGGGGCCGGGGG--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC-----------S
T ss_pred --CccCCCcCCCCCCCHHHhC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC-----------C
Confidence 2233557899999999983 35899999999999999999999999754332 112211111110 0
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..+.....+.++.+++.+|++.||++|||+.|+++.
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001123456679999999999999999999999874
No 235
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2e-36 Score=348.90 Aligned_cols=258 Identities=21% Similarity=0.225 Sum_probs=193.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC------c
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS------L 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 753 (967)
+.|+..+.||+|+||.||+|... +++.||||++..... ....+++.+|+++++.++||||+++++++.... .
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 44788899999999999999854 689999999976532 334577899999999999999999999996553 4
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.++||||+++ ++.+.+... +++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~~~-----l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 6999999987 466666432 7899999999999999999999999999999999999999999999999998654
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc-----
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV----- 908 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 908 (967)
. ........||+.|+|||++ .+..++.++||||+||++|||++|+.||...... ..+..++... ..+..
T Consensus 216 ~---~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~l-g~p~~~~~~~ 289 (464)
T 3ttj_A 216 T---SFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQL-GTPCPEFMKK 289 (464)
T ss_dssp ----CCCC----CCCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-CSCCHHHHTT
T ss_pred C---CcccCCCcccccccCHHHH-cCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc-CCCCHHHHHH
Confidence 3 2223456789999999998 5568999999999999999999999999754432 2222222211 10000
Q ss_pred -----hhhcch---------------hhcCCC---ChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 909 -----EDCVDA---------------RLRGNF---PADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 909 -----~~~~~~---------------~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...++. ...... ....+.++.+++.+|++.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 000000 0112567999999999999999999999876
No 236
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.2e-36 Score=337.24 Aligned_cols=256 Identities=22% Similarity=0.354 Sum_probs=204.3
Q ss_pred HHHhhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc-------ccHHHHHHHHHHHcCC-CCCceeeeeeEE
Q 002094 678 AGANALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI-------KSQEDFEKEMKTLGKI-RHHNLVALEGYY 748 (967)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-------~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 748 (967)
....+.|+..+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 334455788899999999999999975 7999999999765421 1145688999999999 799999999999
Q ss_pred EcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccc
Q 002094 749 WTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGL 828 (967)
Q Consensus 749 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~ 828 (967)
...+..++||||+++++|.+++..... +++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 999999999999999999999976433 89999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccccccccccccccCcccccC-----cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhh
Q 002094 829 ARLLPMLDRCILSSKIQSALGYMAPEFACR-----TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGAL 903 (967)
Q Consensus 829 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (967)
+....... ......||+.|+|||++.. ...++.++||||||+++|||++|+.||...... .....+.....
T Consensus 247 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~ 322 (365)
T 2y7j_A 247 SCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LMLRMIMEGQY 322 (365)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC
T ss_pred ccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCC
Confidence 98764322 2345678999999998732 235788999999999999999999999654321 11111111100
Q ss_pred ccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 904 EDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. ...+ .....+..+.+++.+|++.||++|||++|+++
T Consensus 323 ~------~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 323 Q------FSSP-----EWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp C------CCHH-----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred C------CCCc-----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 0000 01234566999999999999999999999976
No 237
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=331.83 Aligned_cols=253 Identities=22% Similarity=0.359 Sum_probs=200.0
Q ss_pred HHHhhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeE
Q 002094 678 AGANALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLL 756 (967)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 756 (967)
....+.|+..+.||+|+||.||+|... +|+.||||.+.... ....+.+|++++++++||||+++++++...+..++
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 334556788899999999999999975 58999999997653 34678999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
||||+++++|.+++..... .+++..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||.+......
T Consensus 102 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT- 178 (314)
T ss_dssp EEECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT-
T ss_pred EeecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh-
Confidence 9999999999999874322 3899999999999999999999999999999999999999999999999999765432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
........|++.|+|||.+ ....++.++||||+|+++|+|++|+.||......... .. ..... ..
T Consensus 179 -~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~----~~~~~--------~~ 243 (314)
T 3com_A 179 -MAKRNTVIGTPFWMAPEVI-QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FM----IPTNP--------PP 243 (314)
T ss_dssp -BSCBCCCCSCGGGCCHHHH-SSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HH----HHHSC--------CC
T ss_pred -ccccCccCCCCCccChhhc-CCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-HH----HhcCC--------Cc
Confidence 1223455789999999998 5567899999999999999999999999754332111 10 00000 00
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....+...+..+.+++.+|++.||.+|||+.++++
T Consensus 244 ~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 244 TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11123445677999999999999999999999975
No 238
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.9e-36 Score=353.58 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=198.7
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|+.+ ++..||||++..... ......+.+|+++++.++|||||++++++.++...++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 35788899999999999999965 688999999976542 2345779999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||++......
T Consensus 117 ~~~~g~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~- 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ- 192 (494)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-
T ss_pred cCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-
Confidence 9999999998876543 889999999999999999999999999999999999976 445999999999876432
Q ss_pred cccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhh
Q 002094 837 RCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARL 916 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (967)
.......||+.|+|||++ . ..++.++||||+||++|+|++|++||...... .....+.......
T Consensus 193 --~~~~~~~gt~~y~aPE~l-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~----------- 256 (494)
T 3lij_A 193 --KKMKERLGTAYYIAPEVL-R-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYTF----------- 256 (494)
T ss_dssp --BCBCCCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC-----------
T ss_pred --ccccccCCCcCeeCHHHH-c-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCC-----------
Confidence 223456799999999988 3 46899999999999999999999999754432 2122211111100
Q ss_pred cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 917 RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+.....+..+.+++.+|++.||.+|||+.|+++
T Consensus 257 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 257 DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00111234567999999999999999999999875
No 239
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=340.96 Aligned_cols=258 Identities=22% Similarity=0.279 Sum_probs=196.5
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC------c
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS------L 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 753 (967)
+.|+..+.||+|+||.||+|.. .+|+.||||++..... ....+++.+|+++++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 4478888999999999999996 4689999999965432 234567899999999999999999999997653 4
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.++||||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 78999999763 28899999999999999999999999999999999999999999999999998654
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc-----
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV----- 908 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 908 (967)
. ......+|+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+..++... .....
T Consensus 180 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~-g~~~~~~~~~ 252 (367)
T 1cm8_A 180 S-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVT-GTPPAEFVQR 252 (367)
T ss_dssp S-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-CCCCHHHHHT
T ss_pred c-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc-CCCCHHHHHH
Confidence 2 1234568999999999855578999999999999999999999999754432 2222222111 10000
Q ss_pred ------hhhcch------hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 909 ------EDCVDA------RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 909 ------~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...... .-........+..+.+++.+|++.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000000 0001122345677999999999999999999999987
No 240
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-36 Score=355.06 Aligned_cols=250 Identities=22% Similarity=0.338 Sum_probs=205.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45788899999999999999965 789999999976543 345678999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe---CCCCCeEEeecccccccCCC
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI---DSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill---~~~~~~kl~Dfg~a~~~~~~ 835 (967)
||+.+|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||++ +.++.+||+|||++......
T Consensus 106 e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 106 EVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp CCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred ecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 99999999999976543 8999999999999999999999999999999999999 46789999999999866432
Q ss_pred ccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 836 DRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
. ......||+.|+|||.+. +.++.++||||+||++|+|++|++||...... .....+..+...
T Consensus 183 ~---~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~----------- 245 (484)
T 3nyv_A 183 K---KMKDKIGTAYYIAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYT----------- 245 (484)
T ss_dssp C---SHHHHTTGGGTCCHHHHH--TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC-----------
T ss_pred c---ccccCCCCccccCceeec--CCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCC-----------
Confidence 2 233456899999999883 36899999999999999999999999754432 112111111100
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+.....+.++.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 001112345677999999999999999999999986
No 241
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.7e-36 Score=347.46 Aligned_cols=266 Identities=19% Similarity=0.212 Sum_probs=197.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcC-----Cce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP-----SLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 754 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++..... ....+++.+|++++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 45788899999999999999965 588999999975432 33457899999999999999999999998765 568
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||++ ++|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPIF---LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999987 499999976543 89999999999999999999999999999999999999999999999999987643
Q ss_pred Cccc--------------------cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCC--------
Q 002094 835 LDRC--------------------ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVE-------- 886 (967)
Q Consensus 835 ~~~~--------------------~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~-------- 886 (967)
.... .......||+.|+|||++.....++.++||||+||++|||++|..||.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2211 122456789999999987567779999999999999999998554443
Q ss_pred ---CCcc---------------chHhHHHHHHhhhccCCchh-----------hcchh-hcCCC-----ChhhHHHHHHH
Q 002094 887 ---YMED---------------DVVVLCDMVRGALEDGRVED-----------CVDAR-LRGNF-----PADEAIPVIKL 931 (967)
Q Consensus 887 ---~~~~---------------~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~-----~~~~~~~l~~l 931 (967)
.... ........+...+..+.... .+... ..... .+..+.++.++
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 1110 00011111111111111100 00000 00000 12356679999
Q ss_pred HHhhccCCCCCCCCHHHHHH
Q 002094 932 GLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 932 i~~cl~~dP~~Rpt~~evl~ 951 (967)
+.+|++.||++|||++|+++
T Consensus 342 l~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 99999999999999999987
No 242
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-36 Score=333.23 Aligned_cols=253 Identities=21% Similarity=0.337 Sum_probs=199.8
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCC--CCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIR--HHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||++..++++.||||++..... ....+.+.+|++++++++ ||||+++++++..++..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 45788899999999999999988899999999976543 334578999999999997 599999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
| +.+++|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++ ++.+||+|||++.........
T Consensus 108 e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 9 567899999987543 88999999999999999999999999999999999996 489999999999876543333
Q ss_pred cccccccccccccCcccccC----------cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc
Q 002094 839 ILSSKIQSALGYMAPEFACR----------TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV 908 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~----------~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (967)
.......|++.|+|||.+.. ...++.++||||+|+++|||++|+.||............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~----------- 251 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA----------- 251 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-----------
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH-----------
Confidence 33345668999999998733 146888999999999999999999999754433222211
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
..+......++...+.++.+++.+|++.||++|||++|+++.
T Consensus 252 --~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 --IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp --HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 122222334455556789999999999999999999999864
No 243
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-36 Score=339.88 Aligned_cols=264 Identities=20% Similarity=0.268 Sum_probs=204.1
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccc----------------cHHHHHHHHHHHcCCCCCceeeee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIK----------------SQEDFEKEMKTLGKIRHHNLVALE 745 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~----------------~~~~~~~E~~~l~~l~h~niv~~~ 745 (967)
+.|+..+.||+|+||.||+|.. +++.||||++....... ..+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3478888999999999999999 89999999997543211 117899999999999999999999
Q ss_pred eEEEcCCceeEEEEecCCCchhhh------hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCCCEEeCCC
Q 002094 746 GYYWTPSLQLLIYEFISSGSLYKH------LHDGSSRNCLSWRQRFNIILGMAKGLAYLHH-TNIIHYNLKSTNVLIDSS 818 (967)
Q Consensus 746 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~-~~ivH~Dik~~Nill~~~ 818 (967)
+++.+.+..++||||+++++|.++ +.... ...+++..++.++.|++.||+|||+ +||+||||||+||+++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 999999999999999999999999 54422 2348999999999999999999999 999999999999999999
Q ss_pred CCeEEeecccccccCCCccccccccccccccccCcccccCcccCCc-ccchhhHHHHHHHHHcCCCCCCCCccchHhHHH
Q 002094 819 GEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITE-KCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCD 897 (967)
Q Consensus 819 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~-~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~ 897 (967)
+.+||+|||.+...... ......|++.|+|||.+.....++. ++||||+|+++|||++|+.||............
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 264 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 99999999999865432 2345678999999999844435655 999999999999999999999755442222222
Q ss_pred HHHhhhccCCchh-hcch---hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 898 MVRGALEDGRVED-CVDA---RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 898 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+.......+.... .... ..........+.++.+++.+|++.||++|||++|+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2111111000000 0000 0000011445678999999999999999999999986
No 244
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.2e-36 Score=353.84 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=200.4
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCcc------------ccHHHHHHHHHHHcCCCCCceeeeeeE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLI------------KSQEDFEKEMKTLGKIRHHNLVALEGY 747 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 747 (967)
.+.|...+.||+|+||.||+|..+ +++.||||++...... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 345788899999999999999965 5789999999764321 335679999999999999999999999
Q ss_pred EEcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCC---CeEEe
Q 002094 748 YWTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSG---EPKVG 824 (967)
Q Consensus 748 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~---~~kl~ 824 (967)
+.++...++||||+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++ .+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 9999999999999999999999876543 89999999999999999999999999999999999998765 69999
Q ss_pred ecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc
Q 002094 825 DFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 825 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
|||++...... .......||+.|+|||.+ . +.++.++||||+||++|+|++|++||...... .....+..+...
T Consensus 192 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~-~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~ 265 (504)
T 3q5i_A 192 DFGLSSFFSKD---YKLRDRLGTAYYIAPEVL-K-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKKVEKGKYY 265 (504)
T ss_dssp CCTTCEECCTT---SCBCCCCSCTTTCCHHHH-T-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC
T ss_pred ECCCCEEcCCC---CccccccCCcCCCCHHHh-c-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCC
Confidence 99999876432 223456789999999988 3 46899999999999999999999999754432 111111111000
Q ss_pred cCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 905 DGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.... .....+.++.+++.+|++.||.+|||++|+++
T Consensus 266 -------~~~~----~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 266 -------FDFN----DWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -------CCHH----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------CCcc----ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 01234567999999999999999999999975
No 245
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=328.75 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=201.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc---cccHHHHHHHHHHHcCCCCCceeeeeeEEE--cCCcee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL---IKSQEDFEKEMKTLGKIRHHNLVALEGYYW--TPSLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 755 (967)
+.|+..+.||+|+||.||++... +++.||+|++..... ....+.+.+|++++++++||||+++++++. +....+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 45789999999999999999964 688999999975431 234578999999999999999999999984 456789
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+||||++++ +.+++...... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.+......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTC-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCccc-ccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999886 77777654333 3899999999999999999999999999999999999999999999999999876543
Q ss_pred ccccccccccccccccCcccccCc-ccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 836 DRCILSSKIQSALGYMAPEFACRT-VKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
..........|++.|+|||..... ...+.++||||+|+++|||++|+.||...... .....+. ..
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i~-----~~-------- 228 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KLFENIG-----KG-------- 228 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH-----HC--------
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHHh-----cC--------
Confidence 333333456689999999988432 23478999999999999999999999754321 1111111 00
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
....+...+..+.+++.+|++.||++|||++|+++.
T Consensus 229 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 229 --SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 122445667789999999999999999999999864
No 246
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.8e-36 Score=336.27 Aligned_cols=262 Identities=21% Similarity=0.317 Sum_probs=203.8
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC-----CceeE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP-----SLQLL 756 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 756 (967)
.|+..+.||+|+||.||+|... +++.||||++...........+.+|++++++++||||+++++++..+ ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4788899999999999999965 68899999997655444557899999999999999999999998754 36799
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
||||+++ +|.+++.... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 108 v~e~~~~-~L~~~l~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLMET-DLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCSE-EHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccCc-CHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 9999975 9999987632 8899999999999999999999999999999999999999999999999998765322
Q ss_pred cc-cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh----
Q 002094 837 RC-ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC---- 911 (967)
Q Consensus 837 ~~-~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 911 (967)
.. .......||+.|+|||.+.....++.++||||+|+++|||++|+.||........ +..++ ..........+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~-~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHIL-GILGSPSQEDLNCII 260 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHH-HHHCSCCHHHHHTCC
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHH-HHhCCCCHHHHHHhh
Confidence 21 1124567899999999875666789999999999999999999999975443221 22222 11111111000
Q ss_pred -------cchhh-cCC-----CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 912 -------VDARL-RGN-----FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 912 -------~~~~~-~~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..... ... .....+.++.+++.+|++.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 000 11334567999999999999999999999986
No 247
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.3e-36 Score=345.00 Aligned_cols=260 Identities=15% Similarity=0.204 Sum_probs=206.0
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCC-CceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRH-HNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++| ++++.+..++...+..++|||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 4578899999999999999995 5689999998876542 2347899999999976 566666667777888899999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe---CCCCCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI---DSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+ +++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 84 ~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 99 8999999985433 38999999999999999999999999999999999999 578999999999998765422
Q ss_pred cc-----cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccc--hHhHHHHHHhhhccCCch
Q 002094 837 RC-----ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDD--VVVLCDMVRGALEDGRVE 909 (967)
Q Consensus 837 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 909 (967)
.. .......||+.|+|||.+ ....++.++|||||||++|||++|+.||...... ...+..+...... ..+.
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTH-LGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSIE 238 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCHH
T ss_pred cccccccccccccCCCccccCHHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccHH
Confidence 21 122356789999999998 6667899999999999999999999999864432 1222222221111 0010
Q ss_pred hhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcC
Q 002094 910 DCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQS 958 (967)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~ 958 (967)
. .....+.++.+++.+|++.||++||++++++++|+++..
T Consensus 239 -----~----l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 -----A----LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp -----H----HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred -----H----HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1 112345679999999999999999999999999998864
No 248
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.8e-37 Score=349.49 Aligned_cols=243 Identities=16% Similarity=0.163 Sum_probs=188.6
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHH---HHHcCCCCCceeeee-------eEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEM---KTLGKIRHHNLVALE-------GYY 748 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~~ 748 (967)
+.|+..+.||+|+||.||+|+. .+|+.||||++..... ....+.+.+|+ +.+++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4567788999999999999995 5699999999975432 33467899999 556666899999998 666
Q ss_pred EcCCc-----------------eeEEEEecCCCchhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCC
Q 002094 749 WTPSL-----------------QLLIYEFISSGSLYKHLHDGSS----RNCLSWRQRFNIILGMAKGLAYLHHTNIIHYN 807 (967)
Q Consensus 749 ~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~D 807 (967)
..++. .++||||+ +|+|.+++..... ...+++..++.++.||+.||+|||++||+|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 55532 78999999 5799999975321 11244688889999999999999999999999
Q ss_pred CCCCCEEeCCCCCeEEeecccccccCCCccccccccccccccccCcccccCc----------ccCCcccchhhHHHHHHH
Q 002094 808 LKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRT----------VKITEKCDVYGFGVLVLE 877 (967)
Q Consensus 808 ik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~~~t~~~Dv~slGvll~e 877 (967)
|||+||+++.++.+||+|||+++.... ......| +.|+|||++... ..++.++|||||||++||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999985432 2234556 899999998333 278999999999999999
Q ss_pred HHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 878 VVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 878 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
|++|+.||....... ..... . ......+.++.+++.+|++.||++|||+.|+++
T Consensus 306 lltg~~Pf~~~~~~~--------------~~~~~----~--~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 306 IWCADLPITKDAALG--------------GSEWI----F--RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHSSCCC------C--------------CSGGG----G--SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHCCCCCccccccc--------------chhhh----h--hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999996432210 00111 0 112344567999999999999999999999985
No 249
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.3e-36 Score=331.91 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=199.5
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
.+.|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 345788899999999999999976 58999999987554 3456789999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
|+++++|.+++..... .+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++..... ...
T Consensus 97 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK--TLQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH--HHH
T ss_pred eCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc--ccc
Confidence 9999999999875332 289999999999999999999999999999999999999999999999998754321 111
Q ss_pred ccccccccccccCccccc----CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 840 LSSKIQSALGYMAPEFAC----RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~----~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
......|++.|+|||.+. ....++.++||||+|+++|||++|+.||....... ....+... . .
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~----~--------~ 239 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKS----D--------P 239 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS----C--------C
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhcc----C--------C
Confidence 223456889999999873 35568899999999999999999999997544321 11111111 0 0
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.....+...+..+.+++.+|++.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011123445677999999999999999999999875
No 250
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.2e-37 Score=345.84 Aligned_cols=252 Identities=15% Similarity=0.042 Sum_probs=181.5
Q ss_pred cCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHH---HHHcCCCCCceeeee-------eEEEc
Q 002094 684 LNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEM---KTLGKIRHHNLVALE-------GYYWT 750 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~~~~ 750 (967)
|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|+ +.++. +||||++++ +++..
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence 677889999999999999965 789999999987653 23455677884 55555 799988754 44443
Q ss_pred CC-----------------ceeEEEEecCCCchhhhhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCcccCC
Q 002094 751 PS-----------------LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQR------FNIILGMAKGLAYLHHTNIIHYN 807 (967)
Q Consensus 751 ~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~------~~i~~~i~~aL~~LH~~~ivH~D 807 (967)
++ ..++||||++ |+|.+++...... +.+..+ ..++.||+.||+|||++||+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV--YVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc--cchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 32 3799999999 7999999864221 344455 67889999999999999999999
Q ss_pred CCCCCEEeCCCCCeEEeecccccccCCCccccccccccccccccCcccccC-cccCCcccchhhHHHHHHHHHcCCCCCC
Q 002094 808 LKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACR-TVKITEKCDVYGFGVLVLEVVTGKRPVE 886 (967)
Q Consensus 808 ik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~t~~~Dv~slGvll~elltg~~p~~ 886 (967)
|||+||+++.++.+||+|||+++..... .....+|+.|+|||.+.. ...++.++||||+||++|||++|+.||.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999865421 114456689999999832 2578999999999999999999999997
Q ss_pred CCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 887 YMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....... ........................+..+.+++.+|++.||++|||+.|+++
T Consensus 295 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 295 LVTPGIK-------GSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp BCCTTCT-------TCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CcCcccc-------cchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 5432210 000000001111111222223466788999999999999999999999864
No 251
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-36 Score=335.99 Aligned_cols=253 Identities=22% Similarity=0.316 Sum_probs=196.5
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-------cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-------IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS 752 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 752 (967)
.+.|...+.||+|+||.||+|... +++.||||.+..... ......+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 345788999999999999999965 578999999865431 122345889999999999999999999987654
Q ss_pred ceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC---eEEeecccc
Q 002094 753 LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE---PKVGDFGLA 829 (967)
Q Consensus 753 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~---~kl~Dfg~a 829 (967)
.++||||+++++|.+++..... +++..+..++.||+.||+|||++||+||||||+||+++.++. +||+|||++
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred -eEEEEecCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 8999999999999999876443 899999999999999999999999999999999999987654 999999999
Q ss_pred cccCCCccccccccccccccccCccccc--CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCC
Q 002094 830 RLLPMLDRCILSSKIQSALGYMAPEFAC--RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGR 907 (967)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (967)
...... .......||+.|+|||.+. ....++.++||||+|+++|||++|+.||............+.....
T Consensus 165 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---- 237 (322)
T 2ycf_A 165 KILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY---- 237 (322)
T ss_dssp EECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC----
T ss_pred eecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc----
Confidence 866431 1223456899999999863 3557889999999999999999999999754332221111111100
Q ss_pred chhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 908 VEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.. .+. .....+..+.+++.+|++.||++|||++|+++
T Consensus 238 -~~--~~~----~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 -NF--IPE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -CC--CHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cc--Cch----hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 000 01234567999999999999999999999874
No 252
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-36 Score=341.96 Aligned_cols=260 Identities=21% Similarity=0.283 Sum_probs=197.9
Q ss_pred hhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC--------
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP-------- 751 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------- 751 (967)
.+.|+..+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 34578889999999999999985 5789999999875432 234799999999999999999998543
Q ss_pred ------------------------------CceeEEEEecCCCchhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 002094 752 ------------------------------SLQLLIYEFISSGSLYKHLHDG-SSRNCLSWRQRFNIILGMAKGLAYLHH 800 (967)
Q Consensus 752 ------------------------------~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~~i~~~i~~aL~~LH~ 800 (967)
...++||||+++ +|.+.+... .....+++..+..++.||+.||+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 159 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS 159 (383)
T ss_dssp -----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 337899999985 877777542 112238999999999999999999999
Q ss_pred CCcccCCCCCCCEEeC-CCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHH
Q 002094 801 TNIIHYNLKSTNVLID-SSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVV 879 (967)
Q Consensus 801 ~~ivH~Dik~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~ell 879 (967)
+||+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||.+.....++.++||||+||++|||+
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 9999999999999997 68899999999998664322 2345567899999998855567899999999999999999
Q ss_pred cCCCCCCCCccchHhHHHHHHhhhccCCchhhc---------------chhhcCCCChhhHHHHHHHHHhhccCCCCCCC
Q 002094 880 TGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV---------------DARLRGNFPADEAIPVIKLGLICASQVPSNRP 944 (967)
Q Consensus 880 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 944 (967)
+|+.||...... ..+..++.. ...+...++. ....+..++...+..+.+++.+|++.||++||
T Consensus 237 ~g~~pf~~~~~~-~~~~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 237 LGKPLFSGETSI-DQLVRIIQI-MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HSSCSSCCSSHH-HHHHHHHHH-HCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred hCCCCCCCCChH-HHHHHHHHH-hCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 999999754432 222233221 1111111100 01111113445677799999999999999999
Q ss_pred CHHHHHH
Q 002094 945 DMEEVVN 951 (967)
Q Consensus 945 t~~evl~ 951 (967)
|+.|+++
T Consensus 315 t~~e~l~ 321 (383)
T 3eb0_A 315 NPYEAMA 321 (383)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999974
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=334.54 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=195.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEc------CCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWT------PSL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~ 753 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.+++++ +||||+++++++.. .+.
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 44688899999999999999964 68999999997654 3456799999999998 79999999999976 467
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.++||||+++++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 8999999999999999986532 238899999999999999999999999999999999999999999999999987654
Q ss_pred CCccccccccccccccccCcccccC----cccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCch
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACR----TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVE 909 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (967)
.. ........|++.|+|||.+.. ...++.++||||+|+++|+|++|+.||........ ...+.. ..
T Consensus 181 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~----~~--- 250 (326)
T 2x7f_A 181 RT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPR----NP--- 250 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHH----SC---
T ss_pred cC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhc----Cc---
Confidence 21 112334568999999998842 45688999999999999999999999975443211 111111 00
Q ss_pred hhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 910 DCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.....+...+..+.+++.+|++.||++|||++|+++
T Consensus 251 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 251 ------APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ------CCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ------cccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 011112344567999999999999999999999987
No 254
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-36 Score=362.67 Aligned_cols=243 Identities=23% Similarity=0.310 Sum_probs=202.9
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
+.|+..+.||+|+||.||+|+.+ +++.||||++..... ....+.+..|.+++..+ +||+|+++++++.+.+..++|
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 34678889999999999999965 578999999975421 23456788999999988 799999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||+++|+|.+++..... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 421 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-- 495 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-- 495 (674)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT--
T ss_pred EeCcCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccC--
Confidence 999999999999986543 899999999999999999999999999999999999999999999999999854321
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
........||+.|+|||++ ....++.++|||||||++|||++|+.||...... .....+. . ..
T Consensus 496 ~~~~~~~~GT~~Y~APE~l-~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-~~~~~i~----~-----------~~ 558 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIM----E-----------HN 558 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHH-TCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH----S-----------SC
T ss_pred CcccccccCCCcccCHhhh-cCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-HHHHHHH----h-----------CC
Confidence 2234457799999999998 6668999999999999999999999999754332 1111111 1 01
Q ss_pred CCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 918 GNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
..++...+.++.+++.+|++.||++||++
T Consensus 559 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 VAYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred CCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 23556677889999999999999999997
No 255
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-36 Score=346.25 Aligned_cols=258 Identities=20% Similarity=0.254 Sum_probs=199.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCC------CCCceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI------RHHNLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 754 (967)
..|+..+.||+|+||.||+|... +++.||||++.... .....+.+|+++++.+ .|+||+++++++......
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 34788899999999999999865 58999999997542 3345677788877665 578999999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC--eEEeeccccccc
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE--PKVGDFGLARLL 832 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~--~kl~Dfg~a~~~ 832 (967)
++||||+. ++|.+++....... +++..+..++.||+.||+|||+++|+||||||+||+++.++. +||+|||++...
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEEeccC-CCHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 99999996 59999988755433 899999999999999999999999999999999999999887 999999999754
Q ss_pred CCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccC------
Q 002094 833 PMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDG------ 906 (967)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 906 (967)
.. ......||+.|+|||++ ....++.++|||||||++|||++|++||...... ..+..++.. ....
T Consensus 253 ~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~-~~l~~i~~~-~~~p~~~~~~ 324 (429)
T 3kvw_A 253 HQ-----RVYTYIQSRFYRAPEVI-LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIEL-LGMPSQKLLD 324 (429)
T ss_dssp TC-----CCCSSCSCGGGCCHHHH-HTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH-HCCCCHHHHH
T ss_pred CC-----cccccCCCCCccChHHH-hCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-cCCCCHHHHH
Confidence 32 22345789999999998 5567899999999999999999999999755433 222222221 1100
Q ss_pred ---Cchhhcchhh---------------------------cC---------CCChhhHHHHHHHHHhhccCCCCCCCCHH
Q 002094 907 ---RVEDCVDARL---------------------------RG---------NFPADEAIPVIKLGLICASQVPSNRPDME 947 (967)
Q Consensus 907 ---~~~~~~~~~~---------------------------~~---------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ 947 (967)
+...+++... +. ..+...+..+.+++.+|++.||++|||++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0001110000 00 01112356789999999999999999999
Q ss_pred HHHH
Q 002094 948 EVVN 951 (967)
Q Consensus 948 evl~ 951 (967)
|+++
T Consensus 405 e~L~ 408 (429)
T 3kvw_A 405 QALR 408 (429)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9986
No 256
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.5e-36 Score=327.82 Aligned_cols=252 Identities=23% Similarity=0.366 Sum_probs=194.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEc----------
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWT---------- 750 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 750 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 34688899999999999999964 78999999996532 445779999999999999999999998864
Q ss_pred ---CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 751 ---PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 751 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
.+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENL--NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCG--GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcccc--ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 3567899999999999999986432 37889999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcc------------ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhH
Q 002094 828 LARLLPMLDR------------CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVL 895 (967)
Q Consensus 828 ~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~ 895 (967)
.+........ ........|++.|+|||.+.....++.++||||+|+++|||++ ||.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~--- 235 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV--- 235 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH---
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH---
Confidence 9976542110 1122345688999999998555578999999999999999998 554222111
Q ss_pred HHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 896 CDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+..... ... .......++...+..+.+++.+|++.||++|||++|+++
T Consensus 236 -~~~~~~-~~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 236 -NILKKL-RSV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -HHHHHH-HST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -HHHHhc-ccc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111 110 111223345566677999999999999999999999986
No 257
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.2e-36 Score=344.91 Aligned_cols=264 Identities=22% Similarity=0.305 Sum_probs=196.6
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC------Ccee
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP------SLQL 755 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~ 755 (967)
.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+|++++++++|||||++++++... ...+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 4677889999999999999975 58999999986543 2235799999999999999999988532 1256
Q ss_pred EEEEecCCCchhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC-CCeEEeecccccccC
Q 002094 756 LIYEFISSGSLYKHLHDG-SSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS-GEPKVGDFGLARLLP 833 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~-~~~kl~Dfg~a~~~~ 833 (967)
+||||+++ ++.+.+... .....+++..+..++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+++...
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 89999986 566655431 112248999999999999999999999999999999999999965 568999999998664
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhc-
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV- 912 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 912 (967)
... ......+|+.|+|||++.....++.++||||+||++|||++|+.||...... ..+.+++... ..+....+.
T Consensus 209 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~l-g~p~~~~~~~ 283 (420)
T 1j1b_A 209 RGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVL-GTPTREQIRE 283 (420)
T ss_dssp TTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-CSCCHHHHHH
T ss_pred cCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-CCCCHHHHHh
Confidence 322 2334678999999999855557899999999999999999999999754432 2233333211 111111100
Q ss_pred ---------chhh-----cCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH--HHHhhc
Q 002094 913 ---------DARL-----RGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN--ILELIQ 957 (967)
Q Consensus 913 ---------~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~--~L~~~~ 957 (967)
.+.+ ...++...+.++.+++.+|++.||++|||+.|+++ .++++.
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0000 00123345678999999999999999999999985 344443
No 258
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.6e-36 Score=337.51 Aligned_cols=264 Identities=19% Similarity=0.233 Sum_probs=196.2
Q ss_pred HhhccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCcc----------ccHHHHHHHHHHHcCCCCCceeeeeeEEE
Q 002094 680 ANALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLI----------KSQEDFEKEMKTLGKIRHHNLVALEGYYW 749 (967)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 749 (967)
..+.|+..+.||+|+||.||+|...+|+.||||++...... ...+.+.+|++++++++||||+++++++.
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 34567889999999999999999888999999998654321 11378999999999999999999999985
Q ss_pred c-----CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEe
Q 002094 750 T-----PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVG 824 (967)
Q Consensus 750 ~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~ 824 (967)
. ....++||||++ |+|.+++..... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE
Confidence 3 335799999998 588888875432 38999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc
Q 002094 825 DFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 825 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
|||++..... ........+|+.|+|||.+.....++.++||||+|+++|+|++|+.||...... .....++. ...
T Consensus 177 Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~-~~~ 251 (362)
T 3pg1_A 177 DFNLAREDTA---DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVE-VVG 251 (362)
T ss_dssp CTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH-HHC
T ss_pred ecCccccccc---ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HcC
Confidence 9999975432 222345678899999998855577899999999999999999999999754332 12222221 111
Q ss_pred cCCchhh-----------cchhhc-------CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 905 DGRVEDC-----------VDARLR-------GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 905 ~~~~~~~-----------~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.+..... ...... .......+..+.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111110 000000 0012334567999999999999999999999986
No 259
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=5.3e-36 Score=326.50 Aligned_cols=253 Identities=25% Similarity=0.339 Sum_probs=203.9
Q ss_pred hhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--------cccHHHHHHHHHHHcCCC-CCceeeeeeEEEc
Q 002094 681 NALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--------IKSQEDFEKEMKTLGKIR-HHNLVALEGYYWT 750 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 750 (967)
.+.|+..+.||+|+||.||+|..+ +|+.||||++..... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 345788899999999999999975 689999999976531 122456889999999995 9999999999999
Q ss_pred CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 751 PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
++..++||||+++++|.+++..... +++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||.+.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 9999999999999999999976433 8999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCccccccccccccccccCccccc-----CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhcc
Q 002094 831 LLPMLDRCILSSKIQSALGYMAPEFAC-----RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALED 905 (967)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (967)
...... ......+++.|+|||.+. ....++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 173 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~-- 246 (298)
T 1phk_A 173 QLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNY-- 246 (298)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC--
T ss_pred hcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-HHHHHHhcCCc--
Confidence 664321 233456899999999873 2446788999999999999999999999654322 11111111110
Q ss_pred CCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 906 GRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..........+..+.+++.+|++.||++|||+.|+++
T Consensus 247 ---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 247 ---------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ---------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0011112345677999999999999999999999875
No 260
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=340.42 Aligned_cols=263 Identities=20% Similarity=0.347 Sum_probs=183.6
Q ss_pred cCC-CCccCCCCceEEEEEEeC---CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEE--cCCceeEE
Q 002094 684 LNK-DCELGRGGFGVVYRTILQ---DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYW--TPSLQLLI 757 (967)
Q Consensus 684 ~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv 757 (967)
|+. +++||+|+||.||+|+.+ +++.||||++.... ....+.+|++++++++||||+++++++. .....++|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 444 568999999999999965 57899999997543 2346889999999999999999999995 46778999
Q ss_pred EEecCCCchhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe----CCCCCeEEeecc
Q 002094 758 YEFISSGSLYKHLHDGS------SRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI----DSSGEPKVGDFG 827 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~------~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill----~~~~~~kl~Dfg 827 (967)
|||+++ +|.+++.... ....+++..++.++.||+.||+|||++||+||||||+||++ +.++.+||+|||
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 999975 7877775321 11238999999999999999999999999999999999999 677899999999
Q ss_pred cccccCCCcc-ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccc--------hHhHHHH
Q 002094 828 LARLLPMLDR-CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDD--------VVVLCDM 898 (967)
Q Consensus 828 ~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~--------~~~~~~~ 898 (967)
+++....... ........||+.|+|||++.....++.++||||+||++|||++|++||.....+ ...+..+
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 9987643211 122345678999999999855567899999999999999999999999744332 1112222
Q ss_pred HHhhhccCCchhhcchh-----------h-cC------------CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 899 VRGALEDGRVEDCVDAR-----------L-RG------------NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 899 ~~~~~~~~~~~~~~~~~-----------~-~~------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+. .+..+....+.+.. . +. ......+..+.+|+.+|++.||++|||++|+++
T Consensus 258 ~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 258 FN-VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HH-HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HH-hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 11111100000000 0 00 001112456889999999999999999999986
No 261
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.7e-36 Score=338.99 Aligned_cols=258 Identities=20% Similarity=0.265 Sum_probs=183.8
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcC------Cc
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP------SL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 753 (967)
+.|+..+.||+|+||.||+|.. .+|+.||||++..... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 4578889999999999999985 4689999999965432 33457788999999999999999999998654 56
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.++||||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 67999888652 38999999999999999999999999999999999999999999999999998653
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCch----
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVE---- 909 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 909 (967)
. ......||+.|+|||.+.....++.++||||+||++|||++|+.||...... ..+..+.. ....+...
T Consensus 184 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~-~~g~p~~~~~~~ 256 (367)
T 2fst_X 184 D-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILR-LVGTPGAELLKK 256 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH-HHCSCCHHHHTT
T ss_pred c-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HhCCCCHHHHHH
Confidence 2 1334678999999999855578899999999999999999999999754432 22222221 11111000
Q ss_pred -------hhcchhhc-CC-----CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 910 -------DCVDARLR-GN-----FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 910 -------~~~~~~~~-~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
........ .. .....+..+.+++.+|++.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000000 00 01234567899999999999999999999976
No 262
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.9e-36 Score=334.37 Aligned_cols=258 Identities=21% Similarity=0.233 Sum_probs=190.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCC------c
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPS------L 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 753 (967)
+.|+..+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 34788889999999999999854 689999999976432 334567889999999999999999999997654 6
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
.++||||+++ +|.+.+.. .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7999999975 78888753 27899999999999999999999999999999999999999999999999998653
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccC-------
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDG------- 906 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 906 (967)
. ........||+.|+|||.+ ....++.++||||+||++|||++|+.||...... .....++.. ...+
T Consensus 179 ~---~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~-~~~~~~~~~~~ 252 (371)
T 2xrw_A 179 T---SFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQ-LGTPCPEFMKK 252 (371)
T ss_dssp --------------CTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC--CCCCCHHHHTT
T ss_pred c---ccccCCceecCCccCHHHh-cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-hCCCCHHHHHH
Confidence 2 1223456789999999998 5567899999999999999999999999754432 111111111 0000
Q ss_pred -------------C-----chhhcchhhcCC---CChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 907 -------------R-----VEDCVDARLRGN---FPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 907 -------------~-----~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. ............ .+...+..+.+++.+|++.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 000000000000 01123667999999999999999999999986
No 263
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1e-35 Score=328.74 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=201.2
Q ss_pred hccCCCCccCCCCceEEEEEEe--CCCcEEEEEEeecCCc-cccHHHHHHHHHHHcCC---CCCceeeeeeEEE-----c
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL--QDGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKI---RHHNLVALEGYYW-----T 750 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~ 750 (967)
+.|+..+.||+|+||.||+|.. .+|+.||||++..... ......+.+|+++++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 4578889999999999999997 4688999999875432 12223566777776665 8999999999987 5
Q ss_pred CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 751 PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 751 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
....++||||++ |+|.+++....... +++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||.+.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTC-SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999998 59999998754433 8999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchh
Q 002094 831 LLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVED 910 (967)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (967)
.... ........|++.|+|||.+ ....++.++||||+|+++|||++|+.||...... .....++.. ........
T Consensus 169 ~~~~---~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~-~~~~~~~~ 242 (326)
T 1blx_A 169 IYSF---QMALTSVVVTLWYRAPEVL-LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDV-IGLPGEED 242 (326)
T ss_dssp CCCG---GGGGCCCCCCCTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHH-HCCCCGGG
T ss_pred cccC---CCCccccccccceeCHHHH-hcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHH-cCCCCccc
Confidence 6542 1223456789999999998 5567899999999999999999999999755432 222222221 11111111
Q ss_pred hcc------hh-------hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 911 CVD------AR-------LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 911 ~~~------~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
+.. .. ....+....+..+.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 100 00 011123456678999999999999999999999984
No 264
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.7e-36 Score=335.10 Aligned_cols=271 Identities=21% Similarity=0.252 Sum_probs=192.3
Q ss_pred HHhhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc----
Q 002094 679 GANALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL---- 753 (967)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 753 (967)
...+.|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence 34456799999999999999999975 68999999986543 223456778888888999999999999865433
Q ss_pred ---eeEEEEecCCCchhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCcccCCCCCCCEEeCC-CCCeEEeec
Q 002094 754 ---QLLIYEFISSGSLYKHLHD-GSSRNCLSWRQRFNIILGMAKGLAYLH--HTNIIHYNLKSTNVLIDS-SGEPKVGDF 826 (967)
Q Consensus 754 ---~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~~i~~~i~~aL~~LH--~~~ivH~Dik~~Nill~~-~~~~kl~Df 826 (967)
.++||||+++ +|.+.+.. ......+++..+..++.|++.|++||| ++||+||||||+||+++. ++.+||+||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Df 176 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCC
T ss_pred ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeC
Confidence 7899999987 44444332 122234889999999999999999999 999999999999999996 899999999
Q ss_pred ccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccC
Q 002094 827 GLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDG 906 (967)
Q Consensus 827 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (967)
|++....... ......||+.|+|||.+.....++.++||||+|+++|||++|+.||...... ..+..+++... ..
T Consensus 177 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~-~~ 251 (360)
T 3e3p_A 177 GSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG-CP 251 (360)
T ss_dssp TTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC-CC
T ss_pred CCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC-CC
Confidence 9998764322 2335568999999998855666899999999999999999999999754432 22333332111 00
Q ss_pred Cch------------hhc------chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH--HHhhc
Q 002094 907 RVE------------DCV------DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI--LELIQ 957 (967)
Q Consensus 907 ~~~------------~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~--L~~~~ 957 (967)
... ... ............+.++.+++.+|++.||++|||+.|+++. ++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 000 000 0011112233467789999999999999999999999863 44443
No 265
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-35 Score=321.86 Aligned_cols=252 Identities=24% Similarity=0.319 Sum_probs=203.0
Q ss_pred HhhccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEE
Q 002094 680 ANALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 757 (967)
..+.|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3456788999999999999999975 689999999976543 34567899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC---CCeEEeecccccccCC
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS---GEPKVGDFGLARLLPM 834 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~---~~~kl~Dfg~a~~~~~ 834 (967)
|||+++++|.+++..... +++..++.++.|++.||+|||++|++||||||+||+++.+ +.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 999999999998876443 8999999999999999999999999999999999999754 4799999999986543
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
.. ......+++.|+|||.+ .+ .++.++||||+|+++|+|++|+.||...... .....+..+.. .
T Consensus 177 ~~---~~~~~~~~~~y~aPE~~-~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~-----~----- 240 (287)
T 2wei_A 177 NT---KMKDRIGTAYYIAPEVL-RG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKY-----A----- 240 (287)
T ss_dssp CS---SCSCHHHHHTTCCHHHH-TT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC-----C-----
T ss_pred CC---ccccccCcccccChHHh-cC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC-----C-----
Confidence 21 22345588899999988 33 4889999999999999999999999754332 11111111100 0
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.........+.++.+++.+|++.||++|||++|+++
T Consensus 241 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 -FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 000011234567999999999999999999999987
No 266
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.1e-36 Score=336.69 Aligned_cols=258 Identities=21% Similarity=0.254 Sum_probs=197.3
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCce-----
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQ----- 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~----- 754 (967)
+.|...+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 34677889999999999999965 689999999976542 23357789999999999999999999999877655
Q ss_pred -eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccC
Q 002094 755 -LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLP 833 (967)
Q Consensus 755 -~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~ 833 (967)
++||||+. ++|.+++... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGME-----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 5888887432 8899999999999999999999999999999999999999999999999998553
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc-----
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV----- 908 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 908 (967)
. ......||+.|+|||.+.....++.++||||+|+++|||++|+.||...... ..+..+.... .....
T Consensus 196 ~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~ 268 (371)
T 4exu_A 196 A-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVT-GVPGTEFVQK 268 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH-CCCCHHHHTT
T ss_pred c-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh-CCCcHHHHHH
Confidence 2 2234568999999999855578999999999999999999999999754432 2222222111 00000
Q ss_pred ------hhhcchhhcC------CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 002094 909 ------EDCVDARLRG------NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNI 952 (967)
Q Consensus 909 ------~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 952 (967)
.......... ......+..+.+++.+|++.||++|||++|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000000 0123446779999999999999999999999763
No 267
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.4e-35 Score=331.58 Aligned_cols=263 Identities=22% Similarity=0.236 Sum_probs=201.6
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcC-----Ccee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTP-----SLQL 755 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 755 (967)
+.|+..+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 34678889999999999999965 68999999997654444566788999999999999999999988654 6789
Q ss_pred EEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCC
Q 002094 756 LIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPML 835 (967)
Q Consensus 756 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~ 835 (967)
+||||++ ++|.+++... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 91 lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999997 5899998763 2889999999999999999999999999999999999999999999999999876432
Q ss_pred cccc--------ccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCC
Q 002094 836 DRCI--------LSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGR 907 (967)
Q Consensus 836 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (967)
.... ......||+.|+|||.+.....++.++||||+|+++|||++|+.||........ ...+ ........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~-~~~~~~~~ 243 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLI-FGIIGTPH 243 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHH-HHHHCCCC
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHH-HHHhCCCc
Confidence 1111 122356899999999875667889999999999999999999999975543221 1111 11111110
Q ss_pred c------------hhhcchhhcC------CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 908 V------------EDCVDARLRG------NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 908 ~------------~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
. .+........ ......+.++.+++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 0000000000 011345667899999999999999999999987
No 268
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.9e-36 Score=339.90 Aligned_cols=260 Identities=19% Similarity=0.227 Sum_probs=198.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCC--------CCceeeeeeEEE---
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR--------HHNLVALEGYYW--- 749 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~--- 749 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 45788899999999999999854 68899999997542 34567899999998885 788999999987
Q ss_pred -cCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeCCCC--------
Q 002094 750 -TPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLIDSSG-------- 819 (967)
Q Consensus 750 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~~~~-------- 819 (967)
.....++||||+ ++++.+++...... .+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQ-GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 556789999999 55666666544322 389999999999999999999998 999999999999999775
Q ss_pred -----------------------------------------CeEEeecccccccCCCccccccccccccccccCcccccC
Q 002094 820 -----------------------------------------EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACR 858 (967)
Q Consensus 820 -----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 858 (967)
.+||+|||.+..... ......||+.|+|||++ .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----~~~~~~gt~~y~aPE~~-~ 266 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----HFTEDIQTRQYRSLEVL-I 266 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----CSCSCCSCGGGCCHHHH-H
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----cCccCCCCCcccCChhh-c
Confidence 899999999986543 13345689999999998 5
Q ss_pred cccCCcccchhhHHHHHHHHHcCCCCCCCCccch----HhHHHHHHhhhccCCc---------hhhcch-----------
Q 002094 859 TVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDV----VVLCDMVRGALEDGRV---------EDCVDA----------- 914 (967)
Q Consensus 859 ~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~----------- 914 (967)
...++.++|||||||++|||++|+.||....... ......+......... .++...
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 5578999999999999999999999997543211 1111111111111000 000000
Q ss_pred --------hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 915 --------RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 915 --------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
......+...+..+.+++.+|++.||++|||++|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0011245667788999999999999999999999875
No 269
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-35 Score=328.29 Aligned_cols=256 Identities=22% Similarity=0.314 Sum_probs=180.7
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHH-HHcCCCCCceeeeeeEEEcCCceeEEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMK-TLGKIRHHNLVALEGYYWTPSLQLLIYE 759 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e 759 (967)
+.|+..+.||+|+||.||+|... +|+.||||++..........++..|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 34678889999999999999975 689999999987654444455666666 7788899999999999999999999999
Q ss_pred ecCCCchhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeCCCCCeEEeecccccccCCCc
Q 002094 760 FISSGSLYKHLHDG--SSRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 760 ~~~~gsL~~~l~~~--~~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~ 836 (967)
|+++ +|.+++... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 179 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS- 179 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc-
Confidence 9986 787777531 1122388999999999999999999999 9999999999999999999999999999765432
Q ss_pred cccccccccccccccCccccc---CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 837 RCILSSKIQSALGYMAPEFAC---RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~---~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
.......|++.|+|||.+. ....++.++||||||+++|||++|+.||........ .+.... ....
T Consensus 180 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~------~~~~ 247 (327)
T 3aln_A 180 --IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLTQVV------KGDP 247 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCC------CSCC
T ss_pred --cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHHHHh------cCCC
Confidence 1223446899999999873 345688999999999999999999999975332111 010000 0000
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+........+..+.+++.+|++.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111222346678999999999999999999999976
No 270
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=324.97 Aligned_cols=262 Identities=21% Similarity=0.269 Sum_probs=194.0
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEE-----------
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYW----------- 749 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----------- 749 (967)
+.|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 34678889999999999999976 48999999987654 345678999999999999999999999874
Q ss_pred ---cCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC-CCCCeEEee
Q 002094 750 ---TPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID-SSGEPKVGD 825 (967)
Q Consensus 750 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~-~~~~~kl~D 825 (967)
+....++||||++ |+|.+++... .+++..++.++.|++.||+|||++||+||||||+||+++ .++.+||+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467789999998 5999998642 378999999999999999999999999999999999997 567999999
Q ss_pred cccccccCCCcc-ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhc
Q 002094 826 FGLARLLPMLDR-CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALE 904 (967)
Q Consensus 826 fg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (967)
||++........ ........++..|+|||.+.....++.++||||+|+++|||++|+.||...... .....+.... .
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~-~ 242 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESI-P 242 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHS-C
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc-C
Confidence 999986643211 112234556888999998856577899999999999999999999999755432 2222222111 0
Q ss_pred cCC----------chhhcchhhc-C-----CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 905 DGR----------VEDCVDARLR-G-----NFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 905 ~~~----------~~~~~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
... +......... . ......+.++.+++.+|++.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 0000001010 0 012345677999999999999999999999986
No 271
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.6e-35 Score=327.45 Aligned_cols=264 Identities=21% Similarity=0.271 Sum_probs=203.3
Q ss_pred hccCCCCccCCCCceEEEEEEe--CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCC------ceeeeeeEEEcCCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL--QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHH------NLVALEGYYWTPSL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~ 753 (967)
+.|+..+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++.++|+ +++++++++...+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 3578889999999999999986 368899999986532 3456788999998887654 59999999999999
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC----------------
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---------------- 817 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---------------- 817 (967)
.++||||+ +++|.+++...... .+++..+..++.|++.||+|||++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFL-PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCC-CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 99999999 88999999875432 3889999999999999999999999999999999999987
Q ss_pred ---CCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHh
Q 002094 818 ---SGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVV 894 (967)
Q Consensus 818 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 894 (967)
++.+||+|||++..... ......||+.|+|||.+ ....++.++||||+|+++|||++|+.||........
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 242 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVI-LALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH- 242 (339)
T ss_dssp EESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHH-TTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH-
T ss_pred cccCCCceEeeCcccccCcc-----ccccccCCccccChHHh-hCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-
Confidence 66899999999986432 22345789999999998 566789999999999999999999999975443221
Q ss_pred HHHHHHhhhccCCc--------hhhc---------------------ch-hhcCCCChhhHHHHHHHHHhhccCCCCCCC
Q 002094 895 LCDMVRGALEDGRV--------EDCV---------------------DA-RLRGNFPADEAIPVIKLGLICASQVPSNRP 944 (967)
Q Consensus 895 ~~~~~~~~~~~~~~--------~~~~---------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 944 (967)
.. .+......... .... .. ......+...+.++.+++.+|++.||++||
T Consensus 243 ~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 243 LA-MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HH-HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HH-HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 11 11111110000 0000 00 000112345577899999999999999999
Q ss_pred CHHHHHHH--HHhhc
Q 002094 945 DMEEVVNI--LELIQ 957 (967)
Q Consensus 945 t~~evl~~--L~~~~ 957 (967)
|++|+++. ++.++
T Consensus 322 t~~ell~hp~f~~~~ 336 (339)
T 1z57_A 322 TLREALKHPFFDLLK 336 (339)
T ss_dssp CHHHHTTSGGGGGGG
T ss_pred CHHHHhcCHHHHHHh
Confidence 99999853 44443
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=329.73 Aligned_cols=256 Identities=21% Similarity=0.259 Sum_probs=196.8
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc------e
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL------Q 754 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~ 754 (967)
.|...+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|+.++++++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 4677889999999999999965 689999999976532 2335678999999999999999999999987654 4
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||++ ++|.+++.. .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred EEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 99999997 588887743 288999999999999999999999999999999999999999999999999976432
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc------
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV------ 908 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 908 (967)
......+|+.|+|||.+.....++.++||||+|+++|||++|+.||...... ..+..+.... .....
T Consensus 179 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~~ 251 (353)
T 3coi_A 179 -----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVT-GVPGTEFVQKL 251 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHH-CBCCHHHHTTC
T ss_pred -----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-CCCCHHHHHHH
Confidence 1234568899999998855567899999999999999999999999754432 1222222111 00000
Q ss_pred -----hhhcc---hhhc---CCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 909 -----EDCVD---ARLR---GNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 909 -----~~~~~---~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..... ...+ .......+..+.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 0000 1123456778999999999999999999999975
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.2e-35 Score=324.90 Aligned_cols=269 Identities=21% Similarity=0.263 Sum_probs=187.5
Q ss_pred CChhHHHHHHHHHhcC-CCCccccCCCC---CCCCCCCccceEEeCC--------CCCeeeeeeecCCCCCccccccccC
Q 002094 24 TFNDDVLGLIVFKAGL-EDPKEKLTSWS---EDDDNPCNWVGVKCDP--------KTKRVVGLTLDGFSLSGHIGRGLLR 91 (967)
Q Consensus 24 ~~~~d~~all~~k~~~-~~~~~~l~sw~---~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~~~~~~~l~~ 91 (967)
...+|++||++||+++ .||.+.+++|. ....++|.|.|++|+. ...+|+.|+|.++.++ .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 3568999999999999 68877889994 3345689999999952 3467888888888887 67777888
Q ss_pred CCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcccccc-------
Q 002094 92 LQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSF------- 164 (967)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~------- 164 (967)
+++|++|+|++|+++ .+|..++.+++|++|+|++|.++ .+|.. ++.+++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~-l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPAS-IASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGG-GGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHH-HhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 888888888888888 77777888888888888888887 67765 577888888888888777777776654
Q ss_pred --ccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccE
Q 002094 165 --CSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKV 242 (967)
Q Consensus 165 --l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 242 (967)
+++|++|+|++|+++ .+|..+..+++|++|+|++|.+++ +|..+..+++|++|+|++|++.+.+|..|+++++|++
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 666666666666666 556666666666666666666664 3334666666666666666666566666666666666
Q ss_pred EeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccc
Q 002094 243 LDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQF 298 (967)
Q Consensus 243 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 298 (967)
|++++|++.+.+|..+.++++|+.|+|++|.+.+.+|..++.+++|+.+++..|.+
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 66666555555555555555555555555555555555555555555555554444
No 274
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=9.3e-36 Score=349.12 Aligned_cols=269 Identities=26% Similarity=0.287 Sum_probs=206.8
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEc------CCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWT------PSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 754 (967)
+.|+..+.||+|+||.||+|... +|+.||||++.........+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 45899999999999999999964 6899999998766545556789999999999999999999998755 6777
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCC---eEEeecccccc
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGE---PKVGDFGLARL 831 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~---~kl~Dfg~a~~ 831 (967)
++||||+++|+|.+++........+++..++.++.|++.||+|||++||+||||||+||+++.++. +||+|||.+..
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 999999999999999987655445889999999999999999999999999999999999987665 89999999987
Q ss_pred cCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhh
Q 002094 832 LPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDC 911 (967)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (967)
.... .......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... ..|.............
T Consensus 174 ~~~~---~~~~~~~gt~~Y~APE~l-~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 174 LDQG---ELCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSNEHIV 245 (676)
T ss_dssp TTSC---CCCCCCCSCCTTCSSCSS-CCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC------CC
T ss_pred cccc---cccccccCCcccCChHHh-ccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccchhhh
Confidence 6432 223456789999999998 6678999999999999999999999999643221 1111111000000000
Q ss_pred cch------------hhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHH-----HHHHHHhhcC
Q 002094 912 VDA------------RLRGNFPADEAIPVIKLGLICASQVPSNRPDMEE-----VVNILELIQS 958 (967)
Q Consensus 912 ~~~------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e-----vl~~L~~~~~ 958 (967)
... ..........+..+.+++.+|++.||++|||++| +.+.++++.+
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 000 0112234567889999999999999999999987 5666666553
No 275
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=322.80 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=181.2
Q ss_pred ccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccH-HHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEEEe
Q 002094 683 LLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQ-EDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
.|+..+.||+|+||.||+|... +|+.||||++......... +.+.++..+++.++||||+++++++..++..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 105 (318)
T 2dyl_A 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105 (318)
T ss_dssp GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence 3577889999999999999975 6899999999876543333 3444555678888999999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCI 839 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 839 (967)
+ ++.+..+..... ..+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++...... .
T Consensus 106 ~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~---~ 179 (318)
T 2dyl_A 106 M-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD---K 179 (318)
T ss_dssp C-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred c-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC---c
Confidence 9 445555544322 2388999999999999999999995 9999999999999999999999999999765431 2
Q ss_pred ccccccccccccCccccc----CcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchh
Q 002094 840 LSSKIQSALGYMAPEFAC----RTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDAR 915 (967)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~----~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (967)
......+++.|+|||.+. ....++.++||||||+++|||++|+.||..................
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------ 247 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP------------ 247 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC------------
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC------------
Confidence 233456899999999884 2456788999999999999999999999764443332222221110
Q ss_pred hcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 916 LRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
.........+.++.+++.+|++.||.+|||++|+++
T Consensus 248 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000111235667999999999999999999999876
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-35 Score=326.77 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=171.8
Q ss_pred ccCC-CCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEc----CCceeE
Q 002094 683 LLNK-DCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWT----PSLQLL 756 (967)
Q Consensus 683 ~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 756 (967)
.|.. .+.||+|+||.||+|..+ +++.||||++.... ....+....++.++||||+++++++.. ....++
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 3566 456999999999999976 68999999986432 222233334566799999999999875 445789
Q ss_pred EEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecccccccC
Q 002094 757 IYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFGLARLLP 833 (967)
Q Consensus 757 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg~a~~~~ 833 (967)
||||+++|+|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++. ++.+||+|||++....
T Consensus 104 v~e~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CC-CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred EEeccCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 99999999999999875432 3899999999999999999999999999999999999976 4559999999997654
Q ss_pred CCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcc
Q 002094 834 MLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVD 913 (967)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (967)
.. ......+|+.|+|||.+ ....++.++||||+|+++|+|++|+.||.......... . ....+... .
T Consensus 183 ~~----~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~-~~~~~~~~------~ 249 (336)
T 3fhr_A 183 QN----ALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-G-MKRRIRLG------Q 249 (336)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred cc----ccccCCCCcCccChhhh-CCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-h-HHHhhhcc------c
Confidence 21 22345678999999998 66678999999999999999999999996443321100 0 00000000 0
Q ss_pred hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 914 ARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...........+.++.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 250 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111122456678999999999999999999999987
No 277
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2e-35 Score=338.56 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=190.1
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEEEe
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 760 (967)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..++||||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 445667789999999998777778999999998753 345678999999876 899999999999999999999999
Q ss_pred cCCCchhhhhhcCCCCC----CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC-------------CCeEE
Q 002094 761 ISSGSLYKHLHDGSSRN----CLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS-------------GEPKV 823 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~----~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~-------------~~~kl 823 (967)
+. |+|.+++....... ..++..++.++.||+.||+|||++||+||||||+||+++.+ +.+||
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 96 59999998654321 11333567899999999999999999999999999999654 47999
Q ss_pred eecccccccCCCcccc--ccccccccccccCcccccC------cccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHh
Q 002094 824 GDFGLARLLPMLDRCI--LSSKIQSALGYMAPEFACR------TVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVV 894 (967)
Q Consensus 824 ~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~ 894 (967)
+|||++.......... ......||+.|+|||++.. ...++.++||||+||++|||++ |+.||.......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-- 247 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-- 247 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--
Confidence 9999998765422211 1234578999999998843 2568999999999999999999 999997443322
Q ss_pred HHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 895 LCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
..+......... .....+...+.++.+++.+|++.||++|||+.|+++
T Consensus 248 -~~i~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 -SNIIRGIFSLDE--------MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHHHTCCCCCC--------CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHhcCCCCccc--------ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 122222211111 111123456788999999999999999999999975
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.7e-36 Score=328.75 Aligned_cols=242 Identities=26% Similarity=0.398 Sum_probs=198.6
Q ss_pred hhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccc-----cHHHHHHHHHHHcCCC--CCceeeeeeEEEcCC
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIK-----SQEDFEKEMKTLGKIR--HHNLVALEGYYWTPS 752 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~-----~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~ 752 (967)
.+.|+..+.||+|+||.||+|+. .+++.||||++....... ....+.+|+.++++++ |+||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 34578889999999999999985 468999999997654211 2245778999999986 599999999999999
Q ss_pred ceeEEEEecCC-CchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC-CCCCeEEeeccccc
Q 002094 753 LQLLIYEFISS-GSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID-SSGEPKVGDFGLAR 830 (967)
Q Consensus 753 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~-~~~~~kl~Dfg~a~ 830 (967)
..++||||+.+ ++|.+++..... +++..++.++.||+.||+|||++||+||||||+||+++ .++.+||+|||++.
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cEEEEEEcCCCCccHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99999999986 899999976433 88999999999999999999999999999999999998 78899999999998
Q ss_pred ccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchh
Q 002094 831 LLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVED 910 (967)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (967)
..... ......||+.|+|||++......+.++||||||+++|||++|+.||..... ....
T Consensus 199 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~--------- 258 (320)
T 3a99_A 199 LLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRG--------- 258 (320)
T ss_dssp ECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHC---------
T ss_pred ccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhcc---------
Confidence 76432 223456899999999884444457889999999999999999999963211 1110
Q ss_pred hcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 911 CVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...++...+.++.+++.+|++.||++|||++|+++
T Consensus 259 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 259 ------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11133445667999999999999999999999976
No 279
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.3e-34 Score=326.82 Aligned_cols=198 Identities=23% Similarity=0.317 Sum_probs=167.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CC-----ceeeeeeEEEcCCce
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HH-----NLVALEGYYWTPSLQ 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~ 754 (967)
+.|+..+.||+|+||.||+|... +++.||||++.... ....++..|+++++.++ |+ +|+++++++...+..
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 45788899999999999999965 68899999997432 33566788888887774 44 599999999999999
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCCCCEEeC--CCCCeEEeeccccc
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHH--TNIIHYNLKSTNVLID--SSGEPKVGDFGLAR 830 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~--~~ivH~Dik~~Nill~--~~~~~kl~Dfg~a~ 830 (967)
++||||+++ +|.+++....... +++..+..++.|++.||+|||+ .||+||||||+||+++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~~-~L~~~l~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLSY-NLYDLLRNTNFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCCC-BHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCCC-CHHHHHhhcCcCC-CCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 999999965 9999998754333 8999999999999999999994 6999999999999995 57889999999998
Q ss_pred ccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCc
Q 002094 831 LLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYME 889 (967)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~ 889 (967)
.... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||....
T Consensus 210 ~~~~-----~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQ-----RIYQYIQSRFYRSPEVL-LGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTC-----CCCSSCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccc-----ccccccCCccccChHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 6643 12346789999999998 55678999999999999999999999997544
No 280
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.7e-34 Score=317.07 Aligned_cols=86 Identities=31% Similarity=0.377 Sum_probs=50.5
Q ss_pred ccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCc
Q 002094 454 IGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLL 533 (967)
Q Consensus 454 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 533 (967)
+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..| +..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 336 (347)
T 4fmz_A 261 VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMD 336 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCS
T ss_pred HhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccc
Confidence 44445555555555555532 235566666666666666666666666666666666666666665554 56666666
Q ss_pred eEEecCCccc
Q 002094 534 SFNISHNHLH 543 (967)
Q Consensus 534 ~L~l~~N~l~ 543 (967)
.|++++|+++
T Consensus 337 ~L~l~~N~i~ 346 (347)
T 4fmz_A 337 SADFANQVIK 346 (347)
T ss_dssp EESSSCC---
T ss_pred eeehhhhccc
Confidence 6666666654
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=325.61 Aligned_cols=242 Identities=24% Similarity=0.367 Sum_probs=192.3
Q ss_pred hhccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCcc-----ccHHHHHHHHHHHcCC----CCCceeeeeeEEEc
Q 002094 681 NALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLI-----KSQEDFEKEMKTLGKI----RHHNLVALEGYYWT 750 (967)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~-----~~~~~~~~E~~~l~~l----~h~niv~~~~~~~~ 750 (967)
.+.|+..+.||+|+||.||+|+. .+++.||||++...... .....+.+|++++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 34578899999999999999985 46889999999765421 1223456788888887 89999999999999
Q ss_pred CCceeEEEEe-cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC-CCCCeEEeeccc
Q 002094 751 PSLQLLIYEF-ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID-SSGEPKVGDFGL 828 (967)
Q Consensus 751 ~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~-~~~~~kl~Dfg~ 828 (967)
.+..++|||| +.+++|.+++..... +++..++.++.||+.||+|||++||+||||||+||+++ .++.+||+|||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 9999999999 789999999986443 89999999999999999999999999999999999999 789999999999
Q ss_pred ccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCc
Q 002094 829 ARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRV 908 (967)
Q Consensus 829 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (967)
+...... ......|++.|+|||.+......+.++||||+|+++|||++|+.||..... ...
T Consensus 187 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~-------- 247 (312)
T 2iwi_A 187 GALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------ILE-------- 247 (312)
T ss_dssp CEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHH--------
T ss_pred hhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------Hhh--------
Confidence 9876432 223456899999999884444445689999999999999999999963211 110
Q ss_pred hhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 909 EDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....++...+..+.+++.+|++.||++|||++|+++
T Consensus 248 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 248 -------AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------TCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------hccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 012234556677999999999999999999999986
No 282
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.4e-35 Score=329.47 Aligned_cols=260 Identities=21% Similarity=0.238 Sum_probs=198.7
Q ss_pred hccCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-----------CCceeeeeeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-----------HHNLVALEGYYW 749 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 749 (967)
+.|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 3478889999999999999996 468999999997532 34567889999988875 899999999987
Q ss_pred cCC----ceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCEEeC------CC
Q 002094 750 TPS----LQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT-NIIHYNLKSTNVLID------SS 818 (967)
Q Consensus 750 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-~ivH~Dik~~Nill~------~~ 818 (967)
..+ ..++||||+ +++|.+++....... +++..+..++.||+.||+|||++ ||+||||||+||+++ ..
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRG-IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccC-CcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCc
Confidence 644 678999999 889999998754333 88999999999999999999998 999999999999994 44
Q ss_pred CCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccc-----hH
Q 002094 819 GEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDD-----VV 893 (967)
Q Consensus 819 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~-----~~ 893 (967)
+.+||+|||++..... ......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... ..
T Consensus 175 ~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 175 IQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVL-LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp EEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHH-HTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred ceEEEcccccccccCC-----CCCCCCCCccccCcHHH-hCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4799999999986643 12345689999999998 5567899999999999999999999999744321 11
Q ss_pred hHHHHHHhhhccC-------C-chhhcc-------------------hhhcCCCChhhHHHHHHHHHhhccCCCCCCCCH
Q 002094 894 VLCDMVRGALEDG-------R-VEDCVD-------------------ARLRGNFPADEAIPVIKLGLICASQVPSNRPDM 946 (967)
Q Consensus 894 ~~~~~~~~~~~~~-------~-~~~~~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 946 (967)
....++...-..+ . ...+.+ ......++...+.++.+++.+|++.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 1222221110000 0 000000 001223567778899999999999999999999
Q ss_pred HHHHH
Q 002094 947 EEVVN 951 (967)
Q Consensus 947 ~evl~ 951 (967)
+|+++
T Consensus 329 ~ell~ 333 (373)
T 1q8y_A 329 GGLVN 333 (373)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99986
No 283
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.8e-33 Score=313.54 Aligned_cols=308 Identities=23% Similarity=0.335 Sum_probs=244.2
Q ss_pred ccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCc
Q 002094 161 SLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSML 240 (967)
Q Consensus 161 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 240 (967)
.+..+++|++|++++|+++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|++++|+++.. ..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 46678889999999988874 34 37788888889998888886554 88888888888888888753 357888888
Q ss_pred cEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccC
Q 002094 241 KVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 241 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
++|++++|.+++. +. +..+++|+.|++++|......+ .+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 8888888888754 33 7778888888888886554433 37777888888888887775433 677777777777777
Q ss_pred cCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccC
Q 002094 321 QFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSG 400 (967)
Q Consensus 321 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~ 400 (967)
.+++..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~------------------------------~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP------------------------------VANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG------------------------------GGGCTTCCEEECCSSCCCC
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch------------------------------hhcCCcCCEEEccCCccCC
Confidence 7774433 6777777777777777663221 2346789999999999997
Q ss_pred CCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccc
Q 002094 401 VIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKN 480 (967)
Q Consensus 401 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 480 (967)
..+ +..+++|++|++++|.+.+. ..+..+++|+.|++++|++++. +.+..+++|++|++++|++++..|..|+.
T Consensus 236 ~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 236 LSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred Ccc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 665 88999999999999999753 4688999999999999999864 46888999999999999999888999999
Q ss_pred cCccceeeccCCcCcCccchhhhcccCccEEeccCCccc
Q 002094 481 CSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLS 519 (967)
Q Consensus 481 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 519 (967)
+++|+.|+|++|++++..| +..+++|++||+++|+|+
T Consensus 310 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999999997766 889999999999999986
No 284
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.4e-34 Score=323.63 Aligned_cols=257 Identities=20% Similarity=0.282 Sum_probs=197.2
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CC-cEEEEEEeecCCccccHHHHHHHHHHHcCCCCCc------eeeeeeEEEcCCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DG-RSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHN------LVALEGYYWTPSL 753 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 753 (967)
+.|+..+.||+|+||.||+|... ++ +.||||++.... ...+.+.+|++++++++|++ ++.+++++...+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 45788899999999999999964 34 689999997532 34567888999998886655 8999999999999
Q ss_pred eeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEe------------------
Q 002094 754 QLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLI------------------ 815 (967)
Q Consensus 754 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill------------------ 815 (967)
.++||||+ ++++.+++...... .+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQ-PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEEEecc-CCChHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 99999999 56777777654322 38999999999999999999999999999999999999
Q ss_pred -CCCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHh
Q 002094 816 -DSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVV 894 (967)
Q Consensus 816 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 894 (967)
+.++.+||+|||++..... ......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||........
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 247 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVI-LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH- 247 (355)
T ss_dssp EESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred ccCCCcEEEeecCccccccc-----cccCCcCCCcccCCeee-ecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 5678999999999986432 22345789999999998 566789999999999999999999999975443221
Q ss_pred HHHHHHhhhccCCchhhc----------c---------------------hhhcCCCChhhHHHHHHHHHhhccCCCCCC
Q 002094 895 LCDMVRGALEDGRVEDCV----------D---------------------ARLRGNFPADEAIPVIKLGLICASQVPSNR 943 (967)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~----------~---------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 943 (967)
... +....... ...+. . ...........+.++.+++.+|++.||++|
T Consensus 248 ~~~-~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 248 LVM-MEKILGPI-PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHH-HHHHHCCC-CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHH-HHHHcCCC-cHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 111 11111100 00000 0 000011223446689999999999999999
Q ss_pred CCHHHHHH
Q 002094 944 PDMEEVVN 951 (967)
Q Consensus 944 pt~~evl~ 951 (967)
||++|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999874
No 285
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=330.35 Aligned_cols=249 Identities=21% Similarity=0.281 Sum_probs=187.0
Q ss_pred ccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEEEEec
Q 002094 683 LLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 761 (967)
.|+..+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+....++||||+
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 3677889999999997665566799999999975442 2357899999998 7999999999999999999999999
Q ss_pred CCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC-----CCCeEEeecccccccCCCc
Q 002094 762 SSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS-----SGEPKVGDFGLARLLPMLD 836 (967)
Q Consensus 762 ~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~-----~~~~kl~Dfg~a~~~~~~~ 836 (967)
. |+|.+++...... ..+..++.++.||+.||+|||++||+||||||+||+++. ...+||+|||+++......
T Consensus 101 ~-g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 101 A-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp S-EEHHHHHHSSSCC--CCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred C-CCHHHHHHhcCCC--ccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 7 5999999865432 344566789999999999999999999999999999953 2368899999998764322
Q ss_pred cc-cccccccccccccCcccccC--cccCCcccchhhHHHHHHHHHc-CCCCCCCCccchHhHHHHHHhhhccCCchhhc
Q 002094 837 RC-ILSSKIQSALGYMAPEFACR--TVKITEKCDVYGFGVLVLEVVT-GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCV 912 (967)
Q Consensus 837 ~~-~~~~~~~gt~~y~aPE~~~~--~~~~t~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (967)
.. .......||+.|+|||++.. ...++.++||||+||++|||++ |..||........ ... .......
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~~~---~~~~~~~--- 248 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NIL---LGACSLD--- 248 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---HHH---TTCCCCT---
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---HHH---hccCCcc---
Confidence 11 22345679999999999843 4567889999999999999999 9999964332211 111 1110000
Q ss_pred chhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 913 DARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
....+...+..+.+++.+|++.||++|||++|+++
T Consensus 249 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 ----CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ----TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 01112344566889999999999999999999983
No 286
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.9e-34 Score=321.69 Aligned_cols=314 Identities=19% Similarity=0.191 Sum_probs=205.7
Q ss_pred ccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEe
Q 002094 165 CSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLD 244 (967)
Q Consensus 165 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 244 (967)
+++|++|++++|.++...+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~---------------- 107 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY---------------- 107 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC----------------
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc----------------
Confidence 4566666666666654333334555566666666555554444444444444444444444444
Q ss_pred ccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCC
Q 002094 245 FGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTG 324 (967)
Q Consensus 245 l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 324 (967)
..|..|.++++|++|+|++|+++...+..|..+++|++|++++|++.+..+..+..+++|++|++++|++++
T Consensus 108 --------~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 108 --------LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp --------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred --------CCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 444444444444444444444443333334555555555555555554444555555556666666655553
Q ss_pred CCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCC
Q 002094 325 GLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPS 404 (967)
Q Consensus 325 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~ 404 (967)
. .+..+++|+.|++++|.+++. ...++|+.|++++|.+..
T Consensus 180 ~---~~~~l~~L~~L~l~~n~l~~~---------------------------------~~~~~L~~L~l~~n~l~~---- 219 (390)
T 3o6n_A 180 V---DLSLIPSLFHANVSYNLLSTL---------------------------------AIPIAVEELDASHNSINV---- 219 (390)
T ss_dssp C---CGGGCTTCSEEECCSSCCSEE---------------------------------ECCSSCSEEECCSSCCCE----
T ss_pred c---ccccccccceeeccccccccc---------------------------------CCCCcceEEECCCCeeee----
Confidence 3 234445555666655554410 011245555555555442
Q ss_pred CcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCcc
Q 002094 405 NIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSL 484 (967)
Q Consensus 405 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 484 (967)
. |.. ..++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|
T Consensus 220 --------------------~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 220 --------------------V-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp --------------------E-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred --------------------c-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 2 111 135788899999998753 578899999999999999999899999999999
Q ss_pred ceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCC
Q 002094 485 TSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNP 564 (967)
Q Consensus 485 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 564 (967)
+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+++. +|. ..+..+....+.+||
T Consensus 275 ~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~~-~~~~~L~~L~l~~N~ 350 (390)
T 3o6n_A 275 ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LKL-STHHTLKNLTLSHND 350 (390)
T ss_dssp CEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CCC-CTTCCCSEEECCSSC
T ss_pred CEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-eCc-hhhccCCEEEcCCCC
Confidence 999999999995 6777889999999999999999 567789999999999999999985 453 345667778899999
Q ss_pred CCCCccc
Q 002094 565 SLCGSVV 571 (967)
Q Consensus 565 ~lc~~~~ 571 (967)
+.|.+..
T Consensus 351 ~~~~~~~ 357 (390)
T 3o6n_A 351 WDCNSLR 357 (390)
T ss_dssp EEHHHHH
T ss_pred ccchhHH
Confidence 9997654
No 287
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.7e-35 Score=317.83 Aligned_cols=258 Identities=31% Similarity=0.498 Sum_probs=190.6
Q ss_pred CCCEEEccCCCCCC--cCchhhccccccccccccc-cccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEE
Q 002094 263 SCSSLSLKGNSFTG--EVPDWIGKLANLESLDLSL-NQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAI 339 (967)
Q Consensus 263 ~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 339 (967)
+++.|+|++|.+++ .+|..+..+++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~---- 126 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT---- 126 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTT----
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCC----
Confidence 45566666666665 5555566666666666653 5555555555555555555555555555555555555444
Q ss_pred EccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccc
Q 002094 340 DVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSM 419 (967)
Q Consensus 340 ~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 419 (967)
|++|+|++|++++.+|..+..+++|++|+|++
T Consensus 127 ------------------------------------------------L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 127 ------------------------------------------------LVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp ------------------------------------------------CCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred ------------------------------------------------CCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 45555555555555566666667777777777
Q ss_pred cccccccCCCcCCcc-cccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCcc
Q 002094 420 NYLFGSIPASIGKLK-AIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPV 498 (967)
Q Consensus 420 N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 498 (967)
|++.+.+|..+..++ +|+.|++++|++++.+|..+..+. |++|+|++|.+++.+|..|..+++|+.|+|++|++++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 777767777777776 788888888888878888888776 888888888888888888888888999999999888766
Q ss_pred chhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCCCCCCccccCCC
Q 002094 499 PAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCGSVVNRSC 575 (967)
Q Consensus 499 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~c 575 (967)
|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|....+..+....+.+||++||.++. .|
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp GG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred Cc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 65 78889999999999999989999999999999999999999999998777777888889999999998774 45
No 288
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.5e-34 Score=310.04 Aligned_cols=235 Identities=12% Similarity=0.074 Sum_probs=185.4
Q ss_pred hccCCCCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34788899999999999999975 489999999986643 223478999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||++|++|.+++... ....++.+++.|++.||+|||++||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999999999542 3556788999999999999999999999999999999999999998443
Q ss_pred cccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcC
Q 002094 839 ILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRG 918 (967)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (967)
|++ .++.++||||||+++|||++|+.||......... ..... ....... ...
T Consensus 175 -----------~~~--------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-----~~~~~--~~~~~~~--~~~ 226 (286)
T 3uqc_A 175 -----------TMP--------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-----APAER--DTAGQPI--EPA 226 (286)
T ss_dssp -----------CCT--------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-----EECCB--CTTSCBC--CHH
T ss_pred -----------ccC--------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-----HHHHH--HhccCCC--Chh
Confidence 333 3678999999999999999999999754332100 00000 0000000 000
Q ss_pred CCChhhHHHHHHHHHhhccCCCCCCCCHHHHHHHHHhhcCCCC
Q 002094 919 NFPADEAIPVIKLGLICASQVPSNRPDMEEVVNILELIQSPLD 961 (967)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 961 (967)
......+.++.+++.+|++.||++| |+.|+++.|+++....+
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 1123456679999999999999999 99999999999876544
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-33 Score=337.09 Aligned_cols=314 Identities=19% Similarity=0.180 Sum_probs=219.6
Q ss_pred ccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEe
Q 002094 165 CSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLD 244 (967)
Q Consensus 165 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 244 (967)
+++++.|++++|.++...+..|..+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788888888888765555567778888888887777766666666666666666666666655555555555555555
Q ss_pred ccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCC
Q 002094 245 FGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTG 324 (967)
Q Consensus 245 l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 324 (967)
|++|.+++ ..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++
T Consensus 130 L~~n~l~~------------------------l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 130 LERNDLSS------------------------LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCC------------------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCCCCC------------------------CCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 55555553 333334444455555555555544444445555555555555555553
Q ss_pred CCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCC
Q 002094 325 GLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPS 404 (967)
Q Consensus 325 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~ 404 (967)
.. +..+++|+.|++++|.+++. ....+|+.|++++|.++.
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~l---------------------------------~~~~~L~~L~ls~n~l~~---- 225 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLSTL---------------------------------AIPIAVEELDASHNSINV---- 225 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE---------------------------------ECCTTCSEEECCSSCCCE----
T ss_pred cC---hhhhhhhhhhhcccCccccc---------------------------------cCCchhheeeccCCcccc----
Confidence 31 33445566666666655420 011345555555555542
Q ss_pred CcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCcc
Q 002094 405 NIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSL 484 (967)
Q Consensus 405 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 484 (967)
..+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|+.+++|
T Consensus 226 --------------------~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 280 (597)
T 3oja_B 226 --------------------VRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 280 (597)
T ss_dssp --------------------EECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred --------------------cccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCC
Confidence 2111 1 1478999999999986 4789999999999999999999999999999999
Q ss_pred ceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCCCCccCCCcccCCC
Q 002094 485 TSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNP 564 (967)
Q Consensus 485 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 564 (967)
+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++. |. ..+..+....+.+||
T Consensus 281 ~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 281 ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KL-STHHTLKNLTLSHND 356 (597)
T ss_dssp CEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CC-CTTCCCSEEECCSSC
T ss_pred CEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-Ch-hhcCCCCEEEeeCCC
Confidence 999999999996 6778888999999999999999 6788899999999999999999864 43 335667777899999
Q ss_pred CCCCccc
Q 002094 565 SLCGSVV 571 (967)
Q Consensus 565 ~lc~~~~ 571 (967)
|.|.+..
T Consensus 357 ~~~~~~~ 363 (597)
T 3oja_B 357 WDCNSLR 363 (597)
T ss_dssp EEHHHHH
T ss_pred CCChhHH
Confidence 9998644
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.4e-34 Score=346.39 Aligned_cols=239 Identities=20% Similarity=0.258 Sum_probs=192.5
Q ss_pred hccCCCCccCCCCceEEEEEEeC--CCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeEEEcCCc-----e
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQ--DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGYYWTPSL-----Q 754 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~ 754 (967)
+.|+..+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45788899999999999999975 5899999998765544556788999999999999999999999987655 6
Q ss_pred eEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCC
Q 002094 755 LLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPM 834 (967)
Q Consensus 755 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~ 834 (967)
++||||++|++|.+++.. .+++.+++.++.||+.||+|||++||+||||||+||+++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999987754 38999999999999999999999999999999999999875 899999999986543
Q ss_pred CccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcch
Q 002094 835 LDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDA 914 (967)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (967)
. ....||+.|+|||++ .. .++.++|||||||++|+|++|.+||...... ...
T Consensus 234 ~------~~~~gt~~y~aPE~~-~~-~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------------~~~-- 285 (681)
T 2pzi_A 234 F------GYLYGTPGFQAPEIV-RT-GPTVATDIYTVGRTLAALTLDLPTRNGRYVD------------------GLP-- 285 (681)
T ss_dssp C------SCCCCCTTTSCTTHH-HH-CSCHHHHHHHHHHHHHHHHSCCCEETTEECS------------------SCC--
T ss_pred C------CccCCCccccCHHHH-cC-CCCCceehhhhHHHHHHHHhCCCCCcccccc------------------ccc--
Confidence 1 456689999999988 33 3488999999999999999999988532110 000
Q ss_pred hhcCCCChhhHHHHHHHHHhhccCCCCCCCC-HHHHHHHHHhh
Q 002094 915 RLRGNFPADEAIPVIKLGLICASQVPSNRPD-MEEVVNILELI 956 (967)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~evl~~L~~~ 956 (967)
........+..+.+++.+|++.||++||+ ++++.+.|..+
T Consensus 286 --~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 --EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp --TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred --ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 00001122356889999999999999995 66677666654
No 291
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.4e-36 Score=349.61 Aligned_cols=385 Identities=18% Similarity=0.126 Sum_probs=213.4
Q ss_pred CCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCC----CCccccccccccceeeecccccccccCcccc-ccc-
Q 002094 117 GTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTG----PIPESLSFCSSLESVNFSSNRLSGQLPYGIW-FLR- 190 (967)
Q Consensus 117 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 190 (967)
++|++|||++|+++......++..+++|++|+|++|++++ .++..+..+++|++|+|++|++++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 4678888888888755445556778888888888888774 2355666677888888888877754443332 244
Q ss_pred ---cCCeEeecCCcCCC----cccccccCCCCCCeeeccCccccccCCcCcc-----CCCCccEEeccccccCCCCChhh
Q 002094 191 ---SLQSLDLSNNLLEG----EIVKGISNLYDLRAIKLGKNKFSGQLPEDIG-----GCSMLKVLDFGVNSLSGSLPDSL 258 (967)
Q Consensus 191 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~~~~~~l 258 (967)
+|++|+|++|.++. .++..+..+++|++|+|++|++++..+..+. ..++|++|++++|++++....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--
Confidence 57777777777663 3355566666666666666666543332222 133455555555555432210
Q ss_pred hcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCC-----cccccceEEcccCcCCCC----CChh
Q 002094 259 QRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIG-----NLVFLKELNISMNQFTGG----LPES 329 (967)
Q Consensus 259 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~ 329 (967)
.++..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.+++. ++..
T Consensus 161 ------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 161 ------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp ------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred ------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 1123333444555555555544432222222 133566666666666543 3555
Q ss_pred hhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCC----CCCC
Q 002094 330 MMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGV----IPSN 405 (967)
Q Consensus 330 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~----~~~~ 405 (967)
+..+++|+.|++++|++.+.....+. ..+...+++|++|++++|++++. ++..
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~-----------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELC-----------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHH-----------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHH-----------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 55666666666666665532111110 00111234455555555555432 3344
Q ss_pred cccccccchhcccccccccccCCCcCC-----cccccEEEecCCccccc----CcccccCCCCCCEEEcCCCCCCCcCCc
Q 002094 406 IGDLSSLMLLNMSMNYLFGSIPASIGK-----LKAIQVLDFSDNWLNGT----IPPQIGGAVSLKELKLEKNFLSGRIPS 476 (967)
Q Consensus 406 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~ 476 (967)
+..+++|++|++++|.+.+..+..+.. .++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+.
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 444555555555555554332222222 24666777777766643 344555566777777777776654444
Q ss_pred cccc-----cCccceeeccCCcCcC----ccchhhhcccCccEEeccCCccccCCchhhhh-----ccCCceEEecCCcc
Q 002094 477 QIKN-----CSSLTSLILSQNNLTG----PVPAAIANLSNLKYVDLSFNDLSGILPKELIN-----LSHLLSFNISHNHL 542 (967)
Q Consensus 477 ~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~l~~N~l 542 (967)
.+.. .++|+.|+|++|++++ .+|..+..+++|++|||++|++++.-...+.. ...|+.|++.++.+
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~ 439 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 439 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCC
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeeccccc
Confidence 3332 5577777777777765 56666777777777777777776443322221 23466666666655
Q ss_pred cc
Q 002094 543 HG 544 (967)
Q Consensus 543 ~~ 544 (967)
..
T Consensus 440 ~~ 441 (461)
T 1z7x_W 440 SE 441 (461)
T ss_dssp CH
T ss_pred CH
Confidence 53
No 292
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2e-36 Score=351.56 Aligned_cols=392 Identities=19% Similarity=0.151 Sum_probs=284.3
Q ss_pred CCCCCeEecCCCccCcccccc-ccCCCCCcEEEcCCCCCCCC----CCchhhhcCCCCceEeccccccCCCCccccc-cc
Q 002094 92 LQFLQVLSLSNNNFTGTINAD-LASFGTLQVVDFSENNLSGL----IPDEFFRQCGSLREVSFANNNLTGPIPESLS-FC 165 (967)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~~~~~----ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l 165 (967)
+++|++|+|++|+++...... +..+++|++|+|++|++++. ++ ..+..+++|++|+|++|++++..+..+. .+
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~-~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 80 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDIS-SALRVNPALAELNLRSNELGDVGVHCVLQGL 80 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHH-HHHHTCTTCCEEECTTCCCHHHHHHHHHHTT
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHH-HHHHhCCCcCEEeCCCCcCChHHHHHHHHHH
Confidence 357899999999998765444 78899999999999999743 23 3467889999999999999875554443 45
Q ss_pred c----ccceeeeccccccc----ccCccccccccCCeEeecCCcCCCccccccc-----CCCCCCeeeccCccccccC--
Q 002094 166 S----SLESVNFSSNRLSG----QLPYGIWFLRSLQSLDLSNNLLEGEIVKGIS-----NLYDLRAIKLGKNKFSGQL-- 230 (967)
Q Consensus 166 ~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~-- 230 (967)
+ +|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|++++..
T Consensus 81 ~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 81 QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp CSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 5 79999999999994 5688899999999999999999876555443 3568999999999998744
Q ss_pred --CcCccCCCCccEEeccccccCCCCChhhhc-----CCCCCEEEccCCCCCCc----Cchhhccccccccccccccccc
Q 002094 231 --PEDIGGCSMLKVLDFGVNSLSGSLPDSLQR-----LNSCSSLSLKGNSFTGE----VPDWIGKLANLESLDLSLNQFS 299 (967)
Q Consensus 231 --~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~-----l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~ 299 (967)
+..+..+++|++|++++|.++...+..+.. .++|++|+|++|.+++. ++..+..+++|++|++++|++.
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 556777899999999999988655555543 67999999999999864 4777888899999999999887
Q ss_pred ccc-----CCCCCcccccceEEcccCcCCCC----CChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCC
Q 002094 300 GRI-----PSSIGNLVFLKELNISMNQFTGG----LPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLG 370 (967)
Q Consensus 300 ~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~ 370 (967)
+.. +..+..+++|++|++++|++++. ++..+..+++|+.|++++|.+.+..+..+..
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~-------------- 306 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE-------------- 306 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH--------------
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH--------------
Confidence 542 22233578889999999888854 5667777888888888888876432222211
Q ss_pred CCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccC
Q 002094 371 ESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTI 450 (967)
Q Consensus 371 ~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 450 (967)
......++|++|++++|.+++.... .++..+..+++|++|+|++|++++..
T Consensus 307 ---------~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 307 ---------TLLEPGCQLESLWVKSCSFTAACCS--------------------HFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp ---------HHTSTTCCCCEEECTTSCCBGGGHH--------------------HHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred ---------HhccCCccceeeEcCCCCCchHHHH--------------------HHHHHHhhCCCccEEEccCCcccccc
Confidence 0111224677777777766532100 13344555566777777777766544
Q ss_pred cccccC-----CCCCCEEEcCCCCCCC----cCCccccccCccceeeccCCcCcCccchhhhc-----ccCccEEeccCC
Q 002094 451 PPQIGG-----AVSLKELKLEKNFLSG----RIPSQIKNCSSLTSLILSQNNLTGPVPAAIAN-----LSNLKYVDLSFN 516 (967)
Q Consensus 451 p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N 516 (967)
+..+.. .++|++|+|++|.+++ .+|..+..+++|++|+|++|++++.....+.. ..+|+.|++.+|
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~ 437 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDI 437 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTC
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeeccc
Confidence 444432 5678888888888875 67777888888888888888887653333331 335777777777
Q ss_pred ccccCCchhhh
Q 002094 517 DLSGILPKELI 527 (967)
Q Consensus 517 ~l~~~~p~~l~ 527 (967)
.+....++.+.
T Consensus 438 ~~~~~~~~~l~ 448 (461)
T 1z7x_W 438 YWSEEMEDRLQ 448 (461)
T ss_dssp CCCHHHHHHHH
T ss_pred ccCHHHHHHHH
Confidence 77655554443
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.2e-32 Score=300.19 Aligned_cols=289 Identities=21% Similarity=0.227 Sum_probs=142.4
Q ss_pred ccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEecc
Q 002094 167 SLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFG 246 (967)
Q Consensus 167 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 246 (967)
+|+.+++++|.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3444444444444 333332 1344444454444444444444444444444444444444444444445555555555
Q ss_pred ccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCC
Q 002094 247 VNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGL 326 (967)
Q Consensus 247 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 326 (967)
+|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. .+..
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~ 165 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN----------------------SGFE 165 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG----------------------GGSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc----------------------CCCC
Confidence 55444 2222222 344455555555444444444444555555555544431 0122
Q ss_pred ChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCc
Q 002094 327 PESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNI 406 (967)
Q Consensus 327 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~ 406 (967)
+..+..+ +|+.|++++|++++ +|..+ .++|++|++++|++++..+..+
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~------------------------------~~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDL------------------------------PETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSS------------------------------CSSCSCCBCCSSCCCCCCTTSS
T ss_pred cccccCC-ccCEEECcCCCCCc-cCccc------------------------------cCCCCEEECCCCcCCccCHHHh
Confidence 3333333 34444444444331 12110 1345556666666666666666
Q ss_pred ccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCcccccc-----
Q 002094 407 GDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNC----- 481 (967)
Q Consensus 407 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l----- 481 (967)
..+++|+.|+|++|++.+..+..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+|++..+..|...
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 292 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVK 292 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSS
T ss_pred cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccc
Confidence 66677777777777766655556666666666666666665 555556666666666666666665444444432
Q ss_pred -CccceeeccCCcCc--CccchhhhcccCccEEeccCC
Q 002094 482 -SSLTSLILSQNNLT--GPVPAAIANLSNLKYVDLSFN 516 (967)
Q Consensus 482 -~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N 516 (967)
++|+.|++++|++. +..|..|..+++|+.|++++|
T Consensus 293 ~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 293 RAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 34555555555554 344444555555555555544
No 294
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.7e-33 Score=303.05 Aligned_cols=221 Identities=22% Similarity=0.340 Sum_probs=175.0
Q ss_pred CCccCCCCceEEEEEEe-CCCcEEEEEEeecCCccccHHHHHHHHHHH-cCCCCCceeeeeeEEEc----CCceeEEEEe
Q 002094 687 DCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGLIKSQEDFEKEMKTL-GKIRHHNLVALEGYYWT----PSLQLLIYEF 760 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~ 760 (967)
.+.||+|+||.||+|.. .+++.||||++.. ...+.+|++++ +..+||||+++++++.. ....++||||
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 96 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 96 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence 37799999999999996 4689999999863 24577888887 55699999999999876 6678999999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCC---CCCeEEeecccccccCCCcc
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDS---SGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~---~~~~kl~Dfg~a~~~~~~~~ 837 (967)
+++|+|.+++...... .+++..++.++.|++.||+|||++||+||||||+||+++. ++.+||+|||++....
T Consensus 97 ~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 97 LDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp CCSCBHHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred cCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 9999999999875432 3899999999999999999999999999999999999997 7889999999986431
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhc
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLR 917 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (967)
...++.++||||+|+++|||++|+.||........ .. . ....... ..
T Consensus 172 ---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----~~-----~-~~~~~~~-~~ 218 (299)
T 3m2w_A 172 ---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SP-----G-MKTRIRM-GQ 218 (299)
T ss_dssp ---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------C-----C-SCCSSCT-TC
T ss_pred ---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----hH-----H-HHHHHhh-cc
Confidence 23467799999999999999999999964332110 00 0 0000000 00
Q ss_pred CCCC----hhhHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 002094 918 GNFP----ADEAIPVIKLGLICASQVPSNRPDMEEVVN 951 (967)
Q Consensus 918 ~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 951 (967)
...+ ...+.++.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1112 345677999999999999999999999987
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.5e-32 Score=298.67 Aligned_cols=289 Identities=20% Similarity=0.279 Sum_probs=160.9
Q ss_pred CCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCc
Q 002094 56 PCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPD 135 (967)
Q Consensus 56 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~ 135 (967)
.|.|+.+.|... +++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..|.
T Consensus 32 ~c~l~~l~~~~~------------~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 96 (332)
T 2ft3_A 32 HCHLRVVQCSDL------------GLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEK 96 (332)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG
T ss_pred cccCCEEECCCC------------Ccc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHh
Confidence 478888888632 111 2233221 4566666666666655555566666666666666666533332
Q ss_pred hhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCC--cccccccCC
Q 002094 136 EFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEG--EIVKGISNL 213 (967)
Q Consensus 136 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l 213 (967)
.|+.+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. ..+..+..+
T Consensus 97 -~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 172 (332)
T 2ft3_A 97 -AFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL 172 (332)
T ss_dssp -GSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC
T ss_pred -HhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC
Confidence 3455666666666666665 3343333 566666666666664444455566666666666666542 445555555
Q ss_pred CCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccc
Q 002094 214 YDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDL 293 (967)
Q Consensus 214 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 293 (967)
+|++|++++|++++ +|..+. ++|++|++++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|++|+|
T Consensus 173 -~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 173 -KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp -CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred -ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 66666666666653 333332 45666666666666555556666666666666666666555555666666666666
Q ss_pred cccccccccCCCCCcccccceEEcccCcCCCCCChhhhcC------CCCcEEEccCCcCc--CCCChhhhc-ccccEEec
Q 002094 294 SLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNC------GNLLAIDVSQNKLT--GNIPTWIFK-MGLQTVSL 364 (967)
Q Consensus 294 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~--~~~p~~~~~-~~L~~L~L 364 (967)
++|+++ .+|..+..+++|++|++++|++++..+..|... .+|+.|++++|++. +..|..+.. .+|+.+++
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l 327 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQF 327 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhc
Confidence 666665 455556666666666666666665555555432 45566666666655 233333322 25666666
Q ss_pred cCCC
Q 002094 365 SGNR 368 (967)
Q Consensus 365 ~~n~ 368 (967)
++|+
T Consensus 328 ~~n~ 331 (332)
T 2ft3_A 328 GNYK 331 (332)
T ss_dssp ----
T ss_pred cccc
Confidence 6553
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=8.4e-32 Score=297.60 Aligned_cols=291 Identities=18% Similarity=0.261 Sum_probs=212.5
Q ss_pred CCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCC
Q 002094 55 NPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIP 134 (967)
Q Consensus 55 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip 134 (967)
|.|.|+.+.|... +++ .+|..+. +.|++|+|++|++++..+..|+.+++|++|+|++|++++..|
T Consensus 29 c~c~l~~l~~~~~------------~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (330)
T 1xku_A 29 CQCHLRVVQCSDL------------GLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP 93 (330)
T ss_dssp CEEETTEEECTTS------------CCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCT
T ss_pred CcCCCeEEEecCC------------Ccc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCH
Confidence 3477888888642 221 1233232 567888888888887777778888888888888888875545
Q ss_pred chhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCC--cccccccC
Q 002094 135 DEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEG--EIVKGISN 212 (967)
Q Consensus 135 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~ 212 (967)
.. |+.+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|.++. ..+..+.+
T Consensus 94 ~~-~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 169 (330)
T 1xku_A 94 GA-FAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 169 (330)
T ss_dssp TT-TTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGG
T ss_pred HH-hcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccC
Confidence 43 578888888888888887 4555443 678888888888887766677788888888888888764 56677888
Q ss_pred CCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccc
Q 002094 213 LYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLD 292 (967)
Q Consensus 213 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 292 (967)
+++|++|++++|+++. +|..+. ++|++|++++|++++..|..|.++++|+.|+|++|.+++..+..+..+++|++|+
T Consensus 170 l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 170 MKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp CTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred CCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 8888888888888874 454443 7788888888888877778888888888888888888877777788888888888
Q ss_pred ccccccccccCCCCCcccccceEEcccCcCCCCCChhhhc------CCCCcEEEccCCcCcC--CCChhhhc-ccccEEe
Q 002094 293 LSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMN------CGNLLAIDVSQNKLTG--NIPTWIFK-MGLQTVS 363 (967)
Q Consensus 293 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~l~~N~l~~--~~p~~~~~-~~L~~L~ 363 (967)
|++|+++ .+|..+..+++|++|++++|++++..+..|.. .+.|+.|++++|++.. ..|..+.. ..++.++
T Consensus 247 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~ 325 (330)
T 1xku_A 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 325 (330)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEE
T ss_pred CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEE
Confidence 8888887 67777888888888888888888777766653 3677888888888753 23333332 3688888
Q ss_pred ccCCC
Q 002094 364 LSGNR 368 (967)
Q Consensus 364 L~~n~ 368 (967)
|++|+
T Consensus 326 L~~N~ 330 (330)
T 1xku_A 326 LGNYK 330 (330)
T ss_dssp C----
T ss_pred ecccC
Confidence 88774
No 297
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=4.8e-33 Score=316.57 Aligned_cols=240 Identities=15% Similarity=0.127 Sum_probs=177.1
Q ss_pred cCCCCccCCCCceEEEEEEe-CCCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCCC-Cce---------eeeeeE---
Q 002094 684 LNKDCELGRGGFGVVYRTIL-QDGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIRH-HNL---------VALEGY--- 747 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~h-~ni---------v~~~~~--- 747 (967)
|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+.+|+.+++.++| ++. +...+.
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 46677899999999999994 4799999999874432 2235779999999999976 211 111111
Q ss_pred ---------EEc-----CCceeEEEEecCCCchhhhhhc----CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Q 002094 748 ---------YWT-----PSLQLLIYEFISSGSLYKHLHD----GSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLK 809 (967)
Q Consensus 748 ---------~~~-----~~~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik 809 (967)
+.. ....+++|+++ +++|.+++.. ......+++..++.++.||+.||+|||++||+|||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiK 238 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR 238 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 111 12346667755 6799988852 1122247788999999999999999999999999999
Q ss_pred CCCEEeCCCCCeEEeecccccccCCCccccccccccccccccCccccc---------CcccCCcccchhhHHHHHHHHHc
Q 002094 810 STNVLIDSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFAC---------RTVKITEKCDVYGFGVLVLEVVT 880 (967)
Q Consensus 810 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~t~~~Dv~slGvll~ellt 880 (967)
|+|||++.++.+||+|||+++..... .....| +.|+|||++. ....++.++|||||||++|||++
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999998865431 334556 8999999883 44457889999999999999999
Q ss_pred CCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHHhhccCCCCCCCCHHHHH
Q 002094 881 GKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGLICASQVPSNRPDMEEVV 950 (967)
Q Consensus 881 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl 950 (967)
|+.||....... ..+.... .....+.++.+++.+|++.||++|||+.|++
T Consensus 313 g~~Pf~~~~~~~------------------~~~~~~~--~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 313 ADLPNTDDAALG------------------GSEWIFR--SCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp SSCCCCTTGGGS------------------CSGGGGS--SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCCCCCcchhh------------------hHHHHHh--hcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999997443211 0111111 1123456799999999999999999976664
No 298
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=2.6e-31 Score=293.67 Aligned_cols=290 Identities=19% Similarity=0.222 Sum_probs=158.6
Q ss_pred ccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEc
Q 002094 190 RSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSL 269 (967)
Q Consensus 190 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 269 (967)
.+|+.++++++.++. +|..+. ++++.|+|++|++++..+..|+++++|++|++++|++++..|..|.++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 356677777766663 233222 34555555555555444445555555555555555555444444444455555555
Q ss_pred cCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcC-
Q 002094 270 KGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTG- 348 (967)
Q Consensus 270 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~- 348 (967)
++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|++..
T Consensus 108 s~n~l~-------------------------~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 160 (330)
T 1xku_A 108 SKNQLK-------------------------ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS 160 (330)
T ss_dssp CSSCCS-------------------------BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG
T ss_pred CCCcCC-------------------------ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCcc
Confidence 444444 2333222 455555555555555555555555555555555555531
Q ss_pred -CCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccC
Q 002094 349 -NIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIP 427 (967)
Q Consensus 349 -~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 427 (967)
..+. .+..+++|++|++++|+++. +|..+. ++|++|++++|++.+..|
T Consensus 161 ~~~~~----------------------------~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~ 209 (330)
T 1xku_A 161 GIENG----------------------------AFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDA 209 (330)
T ss_dssp GBCTT----------------------------GGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECT
T ss_pred CcChh----------------------------hccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCH
Confidence 1111 11223445555555555543 222222 455566666666655555
Q ss_pred CCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhc---
Q 002094 428 ASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIAN--- 504 (967)
Q Consensus 428 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--- 504 (967)
..+..+++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|..
T Consensus 210 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~ 288 (330)
T 1xku_A 210 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGY 288 (330)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSC
T ss_pred HHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccc
Confidence 56666666666666666666555556666666666666666666 55666666666666666666666555555543
Q ss_pred ---ccCccEEeccCCcccc--CCchhhhhccCCceEEecCCc
Q 002094 505 ---LSNLKYVDLSFNDLSG--ILPKELINLSHLLSFNISHNH 541 (967)
Q Consensus 505 ---l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~l~~N~ 541 (967)
...|+.|++++|++.. ..|..|..+..++.++|++|+
T Consensus 289 ~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 289 NTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 2566777777777652 556677777777777777764
No 299
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=3.8e-33 Score=309.20 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=180.9
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCc-------cccHHHHHHHHHHHcCCC---------CCceeeee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGL-------IKSQEDFEKEMKTLGKIR---------HHNLVALE 745 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-------~~~~~~~~~E~~~l~~l~---------h~niv~~~ 745 (967)
+.|+..+.||+|+||.||+|+. +|+.||||++..... ....+.+.+|+++++.++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4468889999999999999998 689999999986532 233477889999988875 66666665
Q ss_pred eEE-----------------Ec-------------CCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 002094 746 GYY-----------------WT-------------PSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGL 795 (967)
Q Consensus 746 ~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL 795 (967)
+++ .+ .+..++||||+++|++.+.+.+ ..+++..+..++.||+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 543 32 6788999999999977777643 2378999999999999999
Q ss_pred HHHh-cCCcccCCCCCCCEEeCCCC--------------------CeEEeecccccccCCCccccccccccccccccCcc
Q 002094 796 AYLH-HTNIIHYNLKSTNVLIDSSG--------------------EPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPE 854 (967)
Q Consensus 796 ~~LH-~~~ivH~Dik~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE 854 (967)
+||| ++||+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|||
T Consensus 175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE 247 (336)
T 2vuw_A 175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDED 247 (336)
T ss_dssp HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSG
T ss_pred HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChh
Confidence 9999 89999999999999999887 899999999986542 2347899999999
Q ss_pred cccCcccCCcccchhhHHHH-HHHHHcCCCCCCCCccchHhHHHHHHhhhccCCchhhcchhhcCCCChhhHHHHHHHHH
Q 002094 855 FACRTVKITEKCDVYGFGVL-VLEVVTGKRPVEYMEDDVVVLCDMVRGALEDGRVEDCVDARLRGNFPADEAIPVIKLGL 933 (967)
Q Consensus 855 ~~~~~~~~t~~~Dv~slGvl-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 933 (967)
++.+. . +.++||||++++ .+++++|..||... ................. .......+...+.++.+++.
T Consensus 248 ~~~g~-~-~~~~Diwsl~~~~~~~~~~g~~p~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~dli~ 317 (336)
T 2vuw_A 248 LFTGD-G-DYQFDIYRLMKKENNNRWGEYHPYSNV----LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRKIQEFHR 317 (336)
T ss_dssp GGCCC-S-SHHHHHHHHHHHHHTTCTTSCCTHHHH----HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHHHHHHHH
T ss_pred hhcCC-C-ccceehhhhhCCCCcccccccCCCcch----hhhhHHHHhhhhhhccC----cccchhhhhhcCHHHHHHHH
Confidence 98433 3 889999998766 78888899998421 00001111111100000 00011123456788999999
Q ss_pred hhccCCCCCCCCHHHHH
Q 002094 934 ICASQVPSNRPDMEEVV 950 (967)
Q Consensus 934 ~cl~~dP~~Rpt~~evl 950 (967)
+|++.| |++|++
T Consensus 318 ~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 318 TMLNFS-----SATDLL 329 (336)
T ss_dssp HGGGSS-----SHHHHH
T ss_pred HHhccC-----CHHHHH
Confidence 999976 998887
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=6.2e-34 Score=341.73 Aligned_cols=477 Identities=16% Similarity=0.122 Sum_probs=272.8
Q ss_pred CChhHHHHHHHHHhcCCCCccccCCCCCCCCCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCC
Q 002094 24 TFNDDVLGLIVFKAGLEDPKEKLTSWSEDDDNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNN 103 (967)
Q Consensus 24 ~~~~d~~all~~k~~~~~~~~~l~sw~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n 103 (967)
..|+|. |..+-+-+.++. .+.++. --|+.|+++.+.. .+ .+.+.. .....++..+.++++|++|+|+++
T Consensus 15 ~LPdei--l~~I~~~L~~~~-d~~~~s---~vck~W~~~~~~~--~~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~ 83 (592)
T 3ogk_B 15 ATVDDV--IEQVMTYITDPK-DRDSAS---LVCRRWFKIDSET--RE--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGK 83 (592)
T ss_dssp CCGGGT--HHHHHTTCCCHH-HHHHHT---TSCHHHHHHHHHH--CC--EEEESC-GGGSCHHHHHHHCTTCSEEEEECS
T ss_pred CCCHHH--HHHHHHhcCCHH-HHHHHH---HHhHHHHHhhhcc--cc--EEEEee-ccccChHHHHHhCCCCeEEEecCC
Confidence 356664 677777774432 223332 2135899996532 22 222222 223334455678899999999875
Q ss_pred cc---Ccccccccc------------CCCCCcEEEcCCCCCCCCCCchhhhcCCC-CceEeccccc-cCC-CCccccccc
Q 002094 104 NF---TGTINADLA------------SFGTLQVVDFSENNLSGLIPDEFFRQCGS-LREVSFANNN-LTG-PIPESLSFC 165 (967)
Q Consensus 104 ~l---~~~~~~~~~------------~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~-L~~L~L~~n~-l~~-~~p~~l~~l 165 (967)
.. .+.+|..++ .+++|++|+|++|.+++..+..+...+++ |++|+|++|. ++. .++.....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 163 (592)
T 3ogk_B 84 PRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHC 163 (592)
T ss_dssp CGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHC
T ss_pred cchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhC
Confidence 32 133443333 56777777777776665444333222333 7777777665 211 111222366
Q ss_pred cccceeeecccccccc----cCccccccccCCeEeecCCcCCC----cccccccCCCCCCeeeccCccccccCCcCccCC
Q 002094 166 SSLESVNFSSNRLSGQ----LPYGIWFLRSLQSLDLSNNLLEG----EIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGC 237 (967)
Q Consensus 166 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 237 (967)
++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ ..+..+.++++|++|+|++|.+.+ ++..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 7777777777776544 22334456777777777777652 233344556667777777766664 45566666
Q ss_pred CCccEEeccccccC---CCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccC-CCCCcccccc
Q 002094 238 SMLKVLDFGVNSLS---GSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIP-SSIGNLVFLK 313 (967)
Q Consensus 238 ~~L~~L~l~~n~l~---~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~ 313 (967)
++|++|+++.+... +..+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 66666666643322 223344555666666666654332 445555566666666666666543322 2234556666
Q ss_pred eEEcccCcCCCCCChhhhcCCCCcEEEccC-----------CcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccc
Q 002094 314 ELNISMNQFTGGLPESMMNCGNLLAIDVSQ-----------NKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMK 382 (967)
Q Consensus 314 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-----------N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 382 (967)
.|+++++...+.++..+..+++|+.|++++ |.+++. .+....
T Consensus 322 ~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~---------------------------~~~~l~ 374 (592)
T 3ogk_B 322 VLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR---------------------------GLIALA 374 (592)
T ss_dssp EEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH---------------------------HHHHHH
T ss_pred EEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH---------------------------HHHHHH
Confidence 666662222222233334556666666652 233211 111222
Q ss_pred cCCCCccEEEccCCcccCCCCCCccc-ccccchhccc----ccccccc-----cCCCcCCcccccEEEecCC--cccccC
Q 002094 383 DSYQGLQVLDLSSNALSGVIPSNIGD-LSSLMLLNMS----MNYLFGS-----IPASIGKLKAIQVLDFSDN--WLNGTI 450 (967)
Q Consensus 383 ~~~~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~ 450 (967)
..+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|++++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34567777777777777655555554 6777777775 5566542 3334566788888888743 355554
Q ss_pred cccccC-CCCCCEEEcCCCCCCCc-CCccccccCccceeeccCCcCcCc-cchhhhcccCccEEeccCCccccCCchhhh
Q 002094 451 PPQIGG-AVSLKELKLEKNFLSGR-IPSQIKNCSSLTSLILSQNNLTGP-VPAAIANLSNLKYVDLSFNDLSGILPKELI 527 (967)
Q Consensus 451 p~~~~~-l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 527 (967)
+..+.. +++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|++++.-...+.
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~ 534 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQ 534 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGG
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHH
Confidence 444443 67788888888888753 445567788888888888887654 344456788888888888888765333333
Q ss_pred -hccCCceEEecCC
Q 002094 528 -NLSHLLSFNISHN 540 (967)
Q Consensus 528 -~l~~L~~L~l~~N 540 (967)
.++.+....+..+
T Consensus 535 ~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 535 MARPYWNIELIPSR 548 (592)
T ss_dssp GCCTTEEEEEECCC
T ss_pred HhCCCcEEEEecCc
Confidence 4566655555543
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=297.14 Aligned_cols=283 Identities=19% Similarity=0.182 Sum_probs=227.9
Q ss_pred CCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCC
Q 002094 54 DNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLI 133 (967)
Q Consensus 54 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~i 133 (967)
.++|.|.|+ |+.. +++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 27 ~~~C~~~~~-c~~~----------~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CKGS----------SGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EECC----------STTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-eeCC----------CCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 357999998 8643 23333 2454444 48999999999999887779999999999999999998644
Q ss_pred CchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccC-ccccccccCCeEeecCC-cCCCccccccc
Q 002094 134 PDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLP-YGIWFLRSLQSLDLSNN-LLEGEIVKGIS 211 (967)
Q Consensus 134 p~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~ 211 (967)
| ..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..+..+++|++|++++| .+++..+..|.
T Consensus 93 ~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 171 (353)
T 2z80_A 93 E-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 171 (353)
T ss_dssp T-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT
T ss_pred H-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHcc
Confidence 4 457899999999999999997766668999999999999999995444 47889999999999999 57777788899
Q ss_pred CCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhc---ccccc
Q 002094 212 NLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIG---KLANL 288 (967)
Q Consensus 212 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~---~l~~L 288 (967)
++++|++|++++|++++..|..|+.+++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+. ....+
T Consensus 172 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l 251 (353)
T 2z80_A 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLI 251 (353)
T ss_dssp TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCC
T ss_pred CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchh
Confidence 999999999999999988899999999999999999999754444456689999999999999876554433 34556
Q ss_pred cccccccccccc----ccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCC
Q 002094 289 ESLDLSLNQFSG----RIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIP 351 (967)
Q Consensus 289 ~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 351 (967)
+.++|+++.+++ .+|..+..+++|++|++++|+++...+..|..+++|+.|++++|++.+..|
T Consensus 252 ~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 252 KKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 666676666654 356678888999999999999985544456889999999999999987766
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=7.4e-31 Score=286.78 Aligned_cols=254 Identities=21% Similarity=0.245 Sum_probs=183.1
Q ss_pred CCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCC-
Q 002094 54 DNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGL- 132 (967)
Q Consensus 54 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~- 132 (967)
.|.|.|.+|.|+.. .++ .+|..+. ++|++|+|++|+++...+..|+.+++|++|+|++|.++..
T Consensus 4 ~C~C~~~~l~c~~~--~l~-----------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNSK--GLT-----------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCSS--CCS-----------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCCC--Ccc-----------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 35689999999743 121 1233222 5788999999988866556678888888888888888732
Q ss_pred -CCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccC-ccccccccCCeEeecCCcCCCcccccc
Q 002094 133 -IPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLP-YGIWFLRSLQSLDLSNNLLEGEIVKGI 210 (967)
Q Consensus 133 -ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~ 210 (967)
+|.. +..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..+..|
T Consensus 69 ~~~~~-~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 146 (306)
T 2z66_A 69 CCSQS-DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146 (306)
T ss_dssp EEEHH-HHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT
T ss_pred Ccccc-cccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc
Confidence 2333 456788888888888887 456668888888888888888876554 567778888888888888777777777
Q ss_pred cCCCCCCeeeccCccccc-cCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccc
Q 002094 211 SNLYDLRAIKLGKNKFSG-QLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLE 289 (967)
Q Consensus 211 ~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 289 (967)
.++++|++|+|++|++++ ..|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..+..+++|+
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 226 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCC
T ss_pred ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCC
Confidence 777778888888777775 5667777777777777777777766677777777777777777777766666666677777
Q ss_pred cccccccccccccCCCCCccc-ccceEEcccCcCCC
Q 002094 290 SLDLSLNQFSGRIPSSIGNLV-FLKELNISMNQFTG 324 (967)
Q Consensus 290 ~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 324 (967)
+|+|++|++++..|..+..++ +|++|+|++|.+++
T Consensus 227 ~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp EEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred EeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 777777777666666666663 66666666666654
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.1e-31 Score=295.42 Aligned_cols=289 Identities=19% Similarity=0.215 Sum_probs=183.5
Q ss_pred HHhcCCCCccccCCCCCCC-CCCCccceEEeCCCC--CeeeeeeecCCCCCccccccc--cCCCCCCeEecCCCccCccc
Q 002094 35 FKAGLEDPKEKLTSWSEDD-DNPCNWVGVKCDPKT--KRVVGLTLDGFSLSGHIGRGL--LRLQFLQVLSLSNNNFTGTI 109 (967)
Q Consensus 35 ~k~~~~~~~~~l~sw~~~~-~~~c~w~gv~c~~~~--~~v~~l~l~~~~l~~~~~~~l--~~l~~L~~L~L~~n~l~~~~ 109 (967)
.|+++.|+..+|.+|...- .++|.|.++-|.... ..+.. ..+... ..++..+ ...++++.|+|++|+++ .+
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~--~~g~~~-~~~~~~l~~~~~~~l~~L~L~~n~l~-~l 96 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET--RTGRAL-KATADLLEDATQPGRVALELRSVPLP-QF 96 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC--SHHHHH-HHHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc--cCCcch-hhhHHHHhcccccceeEEEccCCCch-hc
Confidence 4566778878899997532 357999988883221 11111 111000 0111111 23577888888888887 66
Q ss_pred cccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCcccccc
Q 002094 110 NADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFL 189 (967)
Q Consensus 110 ~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 189 (967)
|..+..+++|++|+|++|.++ .+|.. ++.+++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..+...
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~~-~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~ 173 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPDT-MQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST 173 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCSC-GGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhHH-HhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc
Confidence 777888888888888888887 67765 477888888888888888 667778888888888888877777777765440
Q ss_pred ccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEc
Q 002094 190 RSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSL 269 (967)
Q Consensus 190 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 269 (967)
.....|.++++|++|+|++|+++ .+|..++.+++|++|++++|++++ +|..+..+++|++|+|
T Consensus 174 ---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 174 ---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp ---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred ---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 01112334555555555555555 455555566666666666666653 4445666666666666
Q ss_pred cCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCc
Q 002094 270 KGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLT 347 (967)
Q Consensus 270 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 347 (967)
++|.+.+.+|..+..+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666666666666666666666666666666666666666666666666666666666666666666665554
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=283.11 Aligned_cols=281 Identities=19% Similarity=0.181 Sum_probs=219.6
Q ss_pred CCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEE
Q 002094 237 CSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELN 316 (967)
Q Consensus 237 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 316 (967)
++.....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 344455677777776 4555443 4778888888888766666788888888888888888877777788888888888
Q ss_pred cccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCC
Q 002094 317 ISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSN 396 (967)
Q Consensus 317 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N 396 (967)
+++|++++..+..|.++++|++|++++|++++ +|. ...+..+++|++|++++|
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~--------------------------~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGE--------------------------TSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCS--------------------------SCSCTTCTTCCEEEEEES
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCc--------------------------hhhhccCCCCcEEECCCC
Confidence 88888886666668888888888888888773 322 012234678888888888
Q ss_pred -cccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCC
Q 002094 397 -ALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIP 475 (967)
Q Consensus 397 -~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 475 (967)
.+++..+..|.++++|++|++++|.+.+..|..+..+++|++|++++|+++...+..+..+++|++|+|++|.+++..+
T Consensus 160 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 239 (353)
T 2z80_A 160 DTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHF 239 (353)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCC
T ss_pred ccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccc
Confidence 4776777889999999999999999998889999999999999999999874444445568899999999999987665
Q ss_pred cccc---ccCccceeeccCCcCcC----ccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 476 SQIK---NCSSLTSLILSQNNLTG----PVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 476 ~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
..+. ..+.++.++|++|.+++ .+|..+..+++|++|||++|+++...+..|..+++|+.|++++|++.|.+|
T Consensus 240 ~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 240 SELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp C------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5443 46678888999888876 478889999999999999999995544446899999999999999999887
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.4e-30 Score=279.31 Aligned_cols=249 Identities=20% Similarity=0.247 Sum_probs=186.6
Q ss_pred CeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCC--Cccccccccccceeee
Q 002094 96 QVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGP--IPESLSFCSSLESVNF 173 (967)
Q Consensus 96 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L 173 (967)
+.+++++++++. +|..+. ++|++|+|++|+++ .+|..+|+.+++|++|+|++|+++.. .|..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCccc-CCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 467777888774 444333 68888999998888 67777778888888888888888743 3566777888888888
Q ss_pred cccccccccCccccccccCCeEeecCCcCCCccc-ccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCC
Q 002094 174 SSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIV-KGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSG 252 (967)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 252 (967)
++|+++ .+|..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|++++..+..|.++++|++|++++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 888887 456667788888888888888876655 567778888888888888877777777777888888888887775
Q ss_pred -CCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhh
Q 002094 253 -SLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMM 331 (967)
Q Consensus 253 -~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 331 (967)
..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|++++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 4667777777777777777777766677777777777777777777765555666777777777777777777777776
Q ss_pred cCC-CCcEEEccCCcCcCC
Q 002094 332 NCG-NLLAIDVSQNKLTGN 349 (967)
Q Consensus 332 ~l~-~L~~L~l~~N~l~~~ 349 (967)
.++ +|+.|++++|++++.
T Consensus 245 ~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCCTTCCEEECTTCCEECS
T ss_pred hhhccCCEEEccCCCeecc
Confidence 663 677777777777654
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8.3e-31 Score=286.74 Aligned_cols=250 Identities=16% Similarity=0.179 Sum_probs=194.4
Q ss_pred ccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCC-CCCCCchhh------hcCCCCceEeccccccCCCCccc
Q 002094 89 LLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNL-SGLIPDEFF------RQCGSLREVSFANNNLTGPIPES 161 (967)
Q Consensus 89 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~-~~~ip~~~~------~~l~~L~~L~L~~n~l~~~~p~~ 161 (967)
++..++|+.|++++|++ .+|..+... |+.|+|++|.+ .+.+|..++ .++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45667788888888888 667666655 88888888888 445665432 15888888888888888888877
Q ss_pred c--ccccccceeeecccccccccCcccccc-----ccCCeEeecCCcCCCcccccccCCCCCCeeeccCcccccc--CCc
Q 002094 162 L--SFCSSLESVNFSSNRLSGQLPYGIWFL-----RSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQ--LPE 232 (967)
Q Consensus 162 l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~ 232 (967)
+ +.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|+++++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8888888888888888876 7777777 8888888888888888888888888888888888887664 233
Q ss_pred Cc--cCCCCccEEeccccccCCC--C-ChhhhcCCCCCEEEccCCCCCCcCc-hhhccccccccccccccccccccCCCC
Q 002094 233 DI--GGCSMLKVLDFGVNSLSGS--L-PDSLQRLNSCSSLSLKGNSFTGEVP-DWIGKLANLESLDLSLNQFSGRIPSSI 306 (967)
Q Consensus 233 ~~--~~l~~L~~L~l~~n~l~~~--~-~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~ 306 (967)
.+ +.+++|++|++++|++++. + ...+..+++|++|+|++|++++..| ..+..+++|++|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 7888888888888888732 2 2344677888888888888887664 45667788888888888888 667766
Q ss_pred CcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcC
Q 002094 307 GNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTG 348 (967)
Q Consensus 307 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 348 (967)
. ++|++|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6 7888888888888866 55 8888888888888888874
No 307
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=5.2e-32 Score=324.99 Aligned_cols=406 Identities=13% Similarity=0.110 Sum_probs=234.7
Q ss_pred ccccccCCCCCcEEEcCCCCC---CCCCCc-----------hhhhcCCCCceEeccccccCCCCccccccc-c-ccceee
Q 002094 109 INADLASFGTLQVVDFSENNL---SGLIPD-----------EFFRQCGSLREVSFANNNLTGPIPESLSFC-S-SLESVN 172 (967)
Q Consensus 109 ~~~~~~~l~~L~~L~Ls~n~~---~~~ip~-----------~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-~-~L~~L~ 172 (967)
++..+..+++|++|+|+++.. .+.+|. .++..+++|++|+|++|.+++..+..++.+ + +|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 344455666777777765432 122221 112245566666666665554444444442 2 366666
Q ss_pred ecccc-ccc-ccCccccccccCCeEeecCCcCCCc----ccccccCCCCCCeeeccCcccc----ccCCcCccCCCCccE
Q 002094 173 FSSNR-LSG-QLPYGIWFLRSLQSLDLSNNLLEGE----IVKGISNLYDLRAIKLGKNKFS----GQLPEDIGGCSMLKV 242 (967)
Q Consensus 173 L~~N~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~ 242 (967)
|++|. ++. .++.....+++|++|+|++|.+++. ++..+.++++|++|++++|.++ +.++..+.++++|++
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 65554 111 1111223455555555555555433 2223344455555555555554 222233344455555
Q ss_pred EeccccccCCCCChhhhcCCCCCEEEccCCCCC---CcCchhhccccccccccccccccccccCCCCCcccccceEEccc
Q 002094 243 LDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFT---GEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISM 319 (967)
Q Consensus 243 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~---~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 319 (967)
|++++|.+.+ ++..+.++++|+.|+++.+... +..+..+..+++|+.|+++++... .+|..+..+++|++|+|++
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~ 302 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLY 302 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETT
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCC
Confidence 5555555543 3444555555555555432211 112233444445555555443222 3334444445555555555
Q ss_pred CcCCCCCC-hhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccC---
Q 002094 320 NQFTGGLP-ESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSS--- 395 (967)
Q Consensus 320 N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~--- 395 (967)
|.+++... ..+..+++|+.|+++ |.+. . ..+......+++|++|++++
T Consensus 303 ~~l~~~~~~~~~~~~~~L~~L~L~-~~~~-----------------------~----~~l~~~~~~~~~L~~L~L~~g~~ 354 (592)
T 3ogk_B 303 ALLETEDHCTLIQKCPNLEVLETR-NVIG-----------------------D----RGLEVLAQYCKQLKRLRIERGAD 354 (592)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEE-GGGH-----------------------H----HHHHHHHHHCTTCCEEEEECCCC
T ss_pred CcCCHHHHHHHHHhCcCCCEEecc-CccC-----------------------H----HHHHHHHHhCCCCCEEEeecCcc
Confidence 54433222 223444555555554 2221 1 11222334567899999993
Q ss_pred --------CcccCCC-CCCcccccccchhcccccccccccCCCcCC-cccccEEEec----CCccccc-----CcccccC
Q 002094 396 --------NALSGVI-PSNIGDLSSLMLLNMSMNYLFGSIPASIGK-LKAIQVLDFS----DNWLNGT-----IPPQIGG 456 (967)
Q Consensus 396 --------N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~ 456 (967)
|.+++.. +.....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~ 434 (592)
T 3ogk_B 355 EQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIG 434 (592)
T ss_dssp SSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHH
T ss_pred ccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHh
Confidence 5665432 222445889999999999998877777766 8999999996 7778753 3444677
Q ss_pred CCCCCEEEcCCCC--CCCcCCccccc-cCccceeeccCCcCcC-ccchhhhcccCccEEeccCCccccC-CchhhhhccC
Q 002094 457 AVSLKELKLEKNF--LSGRIPSQIKN-CSSLTSLILSQNNLTG-PVPAAIANLSNLKYVDLSFNDLSGI-LPKELINLSH 531 (967)
Q Consensus 457 l~~L~~L~L~~N~--l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~ 531 (967)
+++|++|+|++|. +++..+..+.. +++|+.|+|++|++++ .++..+.++++|++|+|++|++++. ++..+..+++
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 8999999998544 66665555544 8999999999999986 3456678899999999999998765 4455568999
Q ss_pred CceEEecCCcccc
Q 002094 532 LLSFNISHNHLHG 544 (967)
Q Consensus 532 L~~L~l~~N~l~~ 544 (967)
|+.|+|++|+++.
T Consensus 515 L~~L~ls~n~it~ 527 (592)
T 3ogk_B 515 LRYLWVQGYRASM 527 (592)
T ss_dssp CCEEEEESCBCCT
T ss_pred cCeeECcCCcCCH
Confidence 9999999999875
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.8e-29 Score=268.09 Aligned_cols=228 Identities=20% Similarity=0.199 Sum_probs=174.7
Q ss_pred cEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecC
Q 002094 120 QVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSN 199 (967)
Q Consensus 120 ~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (967)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 34455555554 345432 35666677777776666666677777777777777777766667777777777777777
Q ss_pred Cc-CCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcC
Q 002094 200 NL-LEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEV 278 (967)
Q Consensus 200 n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 278 (967)
|. ++...+..|..+++|++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 75 66666777777777777777777777777777888888888888888888666667888888888888888888777
Q ss_pred chhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCC
Q 002094 279 PDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIP 351 (967)
Q Consensus 279 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 351 (967)
+..+..+++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++....+
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 7778888999999999999988888889999999999999999998777889999999999999999886544
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.6e-30 Score=284.48 Aligned_cols=269 Identities=19% Similarity=0.188 Sum_probs=229.5
Q ss_pred cCCCCCCCCCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccC-cccccccc-------CCC
Q 002094 46 LTSWSEDDDNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFT-GTINADLA-------SFG 117 (967)
Q Consensus 46 l~sw~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~-------~l~ 117 (967)
..+|.... .|+.|..+.......+++.+++.++.+ .+|..+... |++|+|++|+++ +.+|..+. .++
T Consensus 21 ~~~~~~~~-~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 21 KPDWSSAF-NCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp SCCGGGGG-GSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS
T ss_pred ccchHHHh-hhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC
Confidence 45686543 356677665544456788999999999 778777665 999999999994 56777766 799
Q ss_pred CCcEEEcCCCCCCCCCCchhh-hcCCCCceEeccccccCCCCccccccc-----cccceeeecccccccccCcccccccc
Q 002094 118 TLQVVDFSENNLSGLIPDEFF-RQCGSLREVSFANNNLTGPIPESLSFC-----SSLESVNFSSNRLSGQLPYGIWFLRS 191 (967)
Q Consensus 118 ~L~~L~Ls~n~~~~~ip~~~~-~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (967)
+|++|+|++|++++.+|..+| +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 999999999999999998865 8999999999999999987 8888888 99999999999999888899999999
Q ss_pred CCeEeecCCcCCCc--ccccc--cCCCCCCeeeccCccccc---cCCcCccCCCCccEEeccccccCCCCC-hhhhcCCC
Q 002094 192 LQSLDLSNNLLEGE--IVKGI--SNLYDLRAIKLGKNKFSG---QLPEDIGGCSMLKVLDFGVNSLSGSLP-DSLQRLNS 263 (967)
Q Consensus 192 L~~L~L~~n~l~~~--~~~~~--~~l~~L~~L~L~~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~ 263 (967)
|++|+|++|++.+. .+..+ .++++|++|+|++|++++ .....+.++++|++|++++|++++..| ..+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 99999999998865 33444 899999999999999983 222445688999999999999998775 56777899
Q ss_pred CCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCC
Q 002094 264 CSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGG 325 (967)
Q Consensus 264 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 325 (967)
|++|+|++|+|+ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++++.
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 999999999999 6677666 8999999999999966 65 99999999999999999853
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4e-28 Score=280.23 Aligned_cols=231 Identities=22% Similarity=0.238 Sum_probs=164.3
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
++|++|+|++|++++..+..|..+++|++|+|++|++++ ++...|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC-cChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 578888888888888778888888888888888888774 3334457777777777777777766666677777777777
Q ss_pred ecccccccccCccccccccCCeEeecCC-cCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccC
Q 002094 173 FSSNRLSGQLPYGIWFLRSLQSLDLSNN-LLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS 251 (967)
Q Consensus 173 L~~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 251 (967)
|++|+|++..+..|..+++|++|+|++| .+....+ ..|.++++|++|++++|+++
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~------------------------~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE------------------------GAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT------------------------TTTTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh------------------------hhccCCCCCCEEECCCCccc
Confidence 7777776555556666666666666653 3332222 34555555555555555555
Q ss_pred CCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhh
Q 002094 252 GSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMM 331 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 331 (967)
+. | .+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|.
T Consensus 210 ~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 210 DM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp SC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred cc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 32 2 356667777777777777777777777778888888888888777777788888888888888888877777788
Q ss_pred cCCCCcEEEccCCcCcCCC
Q 002094 332 NCGNLLAIDVSQNKLTGNI 350 (967)
Q Consensus 332 ~l~~L~~L~l~~N~l~~~~ 350 (967)
.+++|+.|+|++|++....
T Consensus 288 ~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TCTTCCEEECCSSCEECST
T ss_pred cccCCCEEEccCCCcCCCC
Confidence 8888888888888887543
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=278.80 Aligned_cols=229 Identities=21% Similarity=0.241 Sum_probs=163.2
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
++++.|+|++|++++..+..|..+++|++|+|++|++++ ++...|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-ECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-cChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 578888888888888777788888888888888888773 4545567777777777777777766666677777777777
Q ss_pred ecccccccccCccccccccCCeEeecCC-cCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccC
Q 002094 173 FSSNRLSGQLPYGIWFLRSLQSLDLSNN-LLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS 251 (967)
Q Consensus 173 L~~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 251 (967)
|++|+|++..+..|..+++|++|+|++| .+....+ ..|.++++|++|++++|+++
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~------------------------~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE------------------------GAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT------------------------TTTTTCSSCCEEECTTSCCS
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc------------------------chhhcccccCeecCCCCcCc
Confidence 7777777555556666666666666663 3332223 34445555555555555555
Q ss_pred CCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhh
Q 002094 252 GSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMM 331 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 331 (967)
.+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..|.
T Consensus 199 -~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 199 -EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp -SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred -ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 223 356666777777777777766677777777888888888888777777788888888888888888877777788
Q ss_pred cCCCCcEEEccCCcCcC
Q 002094 332 NCGNLLAIDVSQNKLTG 348 (967)
Q Consensus 332 ~l~~L~~L~l~~N~l~~ 348 (967)
.+++|+.|+|++|++..
T Consensus 277 ~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWNC 293 (440)
T ss_dssp SCTTCCEEECCSSCEEC
T ss_pred cccCCCEEEcCCCCccC
Confidence 88888888888888864
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.6e-28 Score=279.68 Aligned_cols=230 Identities=20% Similarity=0.176 Sum_probs=189.1
Q ss_pred CCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeec
Q 002094 142 GSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKL 221 (967)
Q Consensus 142 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 221 (967)
++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45666666666666666667777777777777777777666677777777777777777777777777777888888888
Q ss_pred cCccccccCCcCccCCCCccEEeccc-cccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccccc
Q 002094 222 GKNKFSGQLPEDIGGCSMLKVLDFGV-NSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSG 300 (967)
Q Consensus 222 ~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 300 (967)
++|+++...+..|.++++|++|++++ |.+....+..|.++++|++|+|++|++++. | .+..+++|++|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 88888777677888888899999988 445544455799999999999999999965 4 48899999999999999999
Q ss_pred ccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhc-ccccEEeccCCCCCCCC
Q 002094 301 RIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFK-MGLQTVSLSGNRLGESM 373 (967)
Q Consensus 301 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~ 373 (967)
..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+.. .+|+.|+|++|++....
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 88999999999999999999999999999999999999999999999655555443 48999999999987654
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.6e-28 Score=277.92 Aligned_cols=238 Identities=21% Similarity=0.234 Sum_probs=185.3
Q ss_pred cceEEeCCC---------CCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCC
Q 002094 59 WVGVKCDPK---------TKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNL 129 (967)
Q Consensus 59 w~gv~c~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~ 129 (967)
|..|.|... ...++.|+|.++.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 678999643 34678899999999999889999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecc-cccccccCccccccccCCeEeecCCcCCCcccc
Q 002094 130 SGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSS-NRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVK 208 (967)
Q Consensus 130 ~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~ 208 (967)
+ .+|...|..+++|++|+|++|+++...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|.++...
T Consensus 125 ~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~-- 201 (440)
T 3zyj_A 125 T-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-- 201 (440)
T ss_dssp S-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC--
T ss_pred C-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc--
Confidence 9 57777789999999999999999988888999999999999999 4555455557899999999999999988542
Q ss_pred cccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccc
Q 002094 209 GISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANL 288 (967)
Q Consensus 209 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 288 (967)
.+..+++|++|+|++|++++..|..|.++++|++|++++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 46666777777777777766666666666666666666666665555555555555555555555555444445555555
Q ss_pred ccccccccccc
Q 002094 289 ESLDLSLNQFS 299 (967)
Q Consensus 289 ~~L~L~~N~l~ 299 (967)
+.|+|++|.+.
T Consensus 282 ~~L~L~~Np~~ 292 (440)
T 3zyj_A 282 ERIHLHHNPWN 292 (440)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEcCCCCcc
Confidence 55555555443
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.6e-29 Score=273.52 Aligned_cols=266 Identities=20% Similarity=0.197 Sum_probs=194.0
Q ss_pred cEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccC
Q 002094 241 KVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 241 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
+.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|++++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344444555443333344445556666666666665555566666666666666666654433 556666666666666
Q ss_pred cCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccC
Q 002094 321 QFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSG 400 (967)
Q Consensus 321 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~ 400 (967)
++++.. ..++|+.|++++|++++..+ ..+++|++|++++|++++
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~-------------------------------~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSC-------------------------------SRGQGKKNIYLANNKITM 134 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEE-------------------------------CCCSSCEEEECCSSCCCS
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCc-------------------------------cccCCCCEEECCCCCCCC
Confidence 665322 23566666666666653211 124668888888888888
Q ss_pred CCCCCcccccccchhcccccccccccCCCcC-CcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCcccc
Q 002094 401 VIPSNIGDLSSLMLLNMSMNYLFGSIPASIG-KLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIK 479 (967)
Q Consensus 401 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 479 (967)
..+..+..+++|++|+|++|.+.+..+..+. .+++|++|+|++|++++. +. ...+++|++|+|++|++++ +|..+.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~ 211 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQ 211 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhc
Confidence 8888888899999999999999887777764 789999999999999865 33 3458899999999999995 555699
Q ss_pred ccCccceeeccCCcCcCccchhhhcccCccEEeccCCccc-cCCchhhhhccCCceEEec-CCcccccCCC
Q 002094 480 NCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLS-GILPKELINLSHLLSFNIS-HNHLHGELPV 548 (967)
Q Consensus 480 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~-~N~l~~~~p~ 548 (967)
.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.++++ .+.++|..|.
T Consensus 212 ~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 212 SAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp GGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 9999999999999999 57888999999999999999998 8888999999999999999 5567765553
No 315
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.6e-28 Score=259.47 Aligned_cols=267 Identities=19% Similarity=0.179 Sum_probs=213.4
Q ss_pred eeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEecccc
Q 002094 73 GLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANN 152 (967)
Q Consensus 73 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n 152 (967)
.++..+++++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|. .|..+++|++|+|++|
T Consensus 15 ~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 15 TTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDN 90 (285)
T ss_dssp EEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSC
T ss_pred EEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHh-hcCCccCCCEEeCCCC
Confidence 34444555543 33332 46889999999999988888899999999999999999854444 4688999999999999
Q ss_pred c-cCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCC
Q 002094 153 N-LTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLP 231 (967)
Q Consensus 153 ~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 231 (967)
+ ++...|..|..+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 887778889999999999999999998888888899999999999999998888888999999999999999987777
Q ss_pred cCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccc
Q 002094 232 EDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVF 311 (967)
Q Consensus 232 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 311 (967)
..|..+++|++|++++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|++|++++|++....+. ..-...
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHH
Confidence 7889999999999999999988888999999999999999999987778889999999999999998754321 122345
Q ss_pred cceEEcccCcCCCCCChhhhc--CCCCcEEEccCC
Q 002094 312 LKELNISMNQFTGGLPESMMN--CGNLLAIDVSQN 344 (967)
Q Consensus 312 L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l~~N 344 (967)
++.+..+.+.+....|+.+.+ +..+...++++|
T Consensus 250 l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp HHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred HHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 667777788888777777654 334444444443
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=3.1e-28 Score=287.73 Aligned_cols=301 Identities=25% Similarity=0.257 Sum_probs=169.4
Q ss_pred CccccCCCCCCCCCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcE
Q 002094 42 PKEKLTSWSEDDDNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQV 121 (967)
Q Consensus 42 ~~~~l~sw~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (967)
.....++|.... +||.|+|..|..... ..+....++.|++++|+++ .+|..+. ++|++
T Consensus 8 ~~~~w~~W~~~~-~~~~~~~r~~~~~~~------------------~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~ 65 (622)
T 3g06_A 8 YDAVWSAWRRAA-PAEESRGRAAVVQKM------------------RACLNNGNAVLNVGESGLT-TLPDCLP--AHITT 65 (622)
T ss_dssp --CHHHHHHHTC-CGGGHHHHHHHHHHH------------------HHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSE
T ss_pred HHHHHHHHHhcC-CcchhccccccCccc------------------ccccCCCCcEEEecCCCcC-ccChhhC--CCCcE
Confidence 344567897654 479997754421000 0000112444444444444 3333333 44555
Q ss_pred EEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCc
Q 002094 122 VDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNL 201 (967)
Q Consensus 122 L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 201 (967)
|+|++|+++ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+
T Consensus 66 L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 66 LVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQ 132 (622)
T ss_dssp EEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSC
T ss_pred EEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCC
Confidence 555555554 3333 24455555555555552 332 44555555555555553 222 34555555555555
Q ss_pred CCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchh
Q 002094 202 LEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDW 281 (967)
Q Consensus 202 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 281 (967)
+++. |.. +++|++|+|++|++++ +|. .+++|+.|++++|+|++ +| ..+++|+.|+|++|.|++ +|.
T Consensus 133 l~~l-p~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~- 198 (622)
T 3g06_A 133 LTSL-PVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT- 198 (622)
T ss_dssp CSCC-CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-
T ss_pred CCcC-CCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC-
Confidence 5542 221 2555666666665553 222 23456666666666663 33 345666777777777764 332
Q ss_pred hccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccE
Q 002094 282 IGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQT 361 (967)
Q Consensus 282 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~ 361 (967)
.+++|+.|++++|.++ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|++++|+|+ .+|.
T Consensus 199 --~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~--------- 258 (622)
T 3g06_A 199 --LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM--------- 258 (622)
T ss_dssp --CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---------
T ss_pred --ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---------
Confidence 2366777777777776 34432 3677888888888775 44 44577888888888776 3332
Q ss_pred EeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcc
Q 002094 362 VSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLK 434 (967)
Q Consensus 362 L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 434 (967)
.+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|.+.+..|..+..++
T Consensus 259 ----------------------~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 ----------------------LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ----------------------CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ----------------------ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 1356777777777777 5567778888888888888888877776665554
No 317
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=5.1e-31 Score=316.51 Aligned_cols=461 Identities=14% Similarity=0.104 Sum_probs=265.8
Q ss_pred CCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCcc---cc------------ccccCCCCCc
Q 002094 56 PCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGT---IN------------ADLASFGTLQ 120 (967)
Q Consensus 56 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~---~~------------~~~~~l~~L~ 120 (967)
|+.|+++.. .....+++..+... .....+.++++|++|+|+++..... .| ..+..+++|+
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhh----hhceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 457998822 22334555443211 1123466788999999998753211 11 1124567888
Q ss_pred EEEcCCCCCCCCCCchhhhcCCCCceEecccc-ccCCC-CccccccccccceeeecccccccccCcccc----ccccCCe
Q 002094 121 VVDFSENNLSGLIPDEFFRQCGSLREVSFANN-NLTGP-IPESLSFCSSLESVNFSSNRLSGQLPYGIW----FLRSLQS 194 (967)
Q Consensus 121 ~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~ 194 (967)
+|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 88888887776555554446778888888877 44432 333345778888888888877655444333 4567888
Q ss_pred EeecCCc--CCCc-ccccccCCCCCCeeeccCccccccCCcCccCCCCccEEecccc-------ccCCCCChhhhcCCCC
Q 002094 195 LDLSNNL--LEGE-IVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVN-------SLSGSLPDSLQRLNSC 264 (967)
Q Consensus 195 L~L~~n~--l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n-------~l~~~~~~~l~~l~~L 264 (967)
|+|++|. ++.. ....+.++++|++|+|++|...+.++..+..+++|++|+++.+ .+.+ ++..+.++++|
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L 267 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKEL 267 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTC
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCc
Confidence 8887775 2211 1112234577777777777322235666667777777774433 2332 33456666777
Q ss_pred CEE-EccCCCCCCcCchhhccccccccccccccccccccCC-CCCcccccceEEcccCcCCCC-CChhhhcCCCCcEEEc
Q 002094 265 SSL-SLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPS-SIGNLVFLKELNISMNQFTGG-LPESMMNCGNLLAIDV 341 (967)
Q Consensus 265 ~~L-~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l 341 (967)
+.| .+.+... +.++..+..+++|++|+|++|.+++.... .+..+++|++|++++| +++. ++.....+++|+.|++
T Consensus 268 ~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L 345 (594)
T 2p1m_B 268 RCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRV 345 (594)
T ss_dssp CEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEE
T ss_pred ccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEE
Confidence 766 3332222 23344444566677777766665533211 2345566666666666 3321 1122234666666666
Q ss_pred cCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcc-cccccchhccc--
Q 002094 342 SQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIG-DLSSLMLLNMS-- 418 (967)
Q Consensus 342 ~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls-- 418 (967)
+++.-.| ....+.+++ ..+..+...+++|+.|+++.|.+++..+..+. .+++|+.|+++
T Consensus 346 ~~~~~~g--------------~~~~~~l~~----~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~ 407 (594)
T 2p1m_B 346 FPSEPFV--------------MEPNVALTE----QGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 (594)
T ss_dssp ECSCTTC--------------SSCSSCCCH----HHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEES
T ss_pred ecCcccc--------------cccCCCCCH----HHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecc
Confidence 3321000 001111111 00111222356677777777776654444443 36677777777
Q ss_pred c----ccccc-----ccCCCcCCcccccEEEecCCcccccCcccccC-CCCCCEEEcCCCCCCCcCCccc-cccCcccee
Q 002094 419 M----NYLFG-----SIPASIGKLKAIQVLDFSDNWLNGTIPPQIGG-AVSLKELKLEKNFLSGRIPSQI-KNCSSLTSL 487 (967)
Q Consensus 419 ~----N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L 487 (967)
+ |.+++ .++..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|
T Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L 486 (594)
T 2p1m_B 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKL 486 (594)
T ss_dssp STTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEE
T ss_pred cCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEE
Confidence 3 34431 1222355677888888877 666555555555 7788889998888876555444 668889999
Q ss_pred eccCCcCcCccch-hhhcccCccEEeccCCccccCCchhh-hhccCCceEEecCCccc
Q 002094 488 ILSQNNLTGPVPA-AIANLSNLKYVDLSFNDLSGILPKEL-INLSHLLSFNISHNHLH 543 (967)
Q Consensus 488 ~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~l~~N~l~ 543 (967)
+|++|.+++.... ....+++|++|++++|+++..-...+ ..+++|+...+..+.-.
T Consensus 487 ~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 487 EIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp EEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred ECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 9999988655444 34458889999999998864444445 45677777666665443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.3e-29 Score=272.48 Aligned_cols=253 Identities=17% Similarity=0.149 Sum_probs=130.9
Q ss_pred eecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEecccccc
Q 002094 75 TLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNL 154 (967)
Q Consensus 75 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l 154 (967)
++..+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|+|++|++
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEE
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCcc
Confidence 333333333333333445556666666666665555555666666666666665554322 45555566666665555
Q ss_pred CCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCc
Q 002094 155 TGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDI 234 (967)
Q Consensus 155 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 234 (967)
++. ...++|++|++++|++++..+.. +++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..+
T Consensus 93 ~~l-----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 93 QEL-----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp EEE-----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred ccc-----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 532 12355555555555555443332 3455555555555555555555555555555555555555444444
Q ss_pred c-CCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccc
Q 002094 235 G-GCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLK 313 (967)
Q Consensus 235 ~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 313 (967)
. .+++|++|++++|.+++. + ....+++|++|+|++|++++.. ..+..+++|++|+|++|+++ .+|..+..+++|+
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~ 240 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLE 240 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCC
T ss_pred hhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhhcCCCCC
Confidence 2 455555555555555533 1 1223555555555555555332 23555555555555555555 3444455555555
Q ss_pred eEEcccCcCC-CCCChhhhcCCCCcEEEcc
Q 002094 314 ELNISMNQFT-GGLPESMMNCGNLLAIDVS 342 (967)
Q Consensus 314 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~ 342 (967)
.|++++|.+. +..|..+..+++|+.|+++
T Consensus 241 ~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 241 HFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred EEEccCCCccCcCHHHHHhccccceEEECC
Confidence 5555555555 4444555555555555554
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=8.5e-27 Score=249.27 Aligned_cols=217 Identities=18% Similarity=0.224 Sum_probs=171.9
Q ss_pred CCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCC
Q 002094 55 NPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIP 134 (967)
Q Consensus 55 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip 134 (967)
++|.|.|+.|... ..++.+++.+++++. +|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|
T Consensus 3 ~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~ 77 (270)
T 2o6q_A 3 ALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLP 77 (270)
T ss_dssp CCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCC
T ss_pred ccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeC
Confidence 4799999998653 346678888888875 555444 67899999999998877778888999999999999888 577
Q ss_pred chhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCC
Q 002094 135 DEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLY 214 (967)
Q Consensus 135 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 214 (967)
..+|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 77778888888888888888877777788888888888888888877777778888888888888888877777777788
Q ss_pred CCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCC
Q 002094 215 DLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTG 276 (967)
Q Consensus 215 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 276 (967)
+|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|.+..
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 88888888888776666667777777777777777776655567777777777777777653
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.5e-26 Score=271.53 Aligned_cols=88 Identities=32% Similarity=0.345 Sum_probs=67.9
Q ss_pred ccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEec
Q 002094 434 KAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDL 513 (967)
Q Consensus 434 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 513 (967)
++|+.|+|++|++++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 566777777777764 44 34567888888888887 4554 5678888888888888 67888888899999999
Q ss_pred cCCccccCCchhhhhcc
Q 002094 514 SFNDLSGILPKELINLS 530 (967)
Q Consensus 514 s~N~l~~~~p~~l~~l~ 530 (967)
++|++++..|..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999888888887776
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.7e-28 Score=283.32 Aligned_cols=186 Identities=15% Similarity=0.097 Sum_probs=132.0
Q ss_pred ccCCCCceEEEEEE-eCCCcEEEEEEeecCCc---------cccHHHHHHHHHHHcCC-CCCceeeeeeEEEcCCceeEE
Q 002094 689 ELGRGGFGVVYRTI-LQDGRSVAIKKLTVSGL---------IKSQEDFEKEMKTLGKI-RHHNLVALEGYYWTPSLQLLI 757 (967)
Q Consensus 689 ~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 757 (967)
..+.|+.|.++.++ ...|+.||||.+..... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777666655 33589999999976532 12346799999999999 799999999999999999999
Q ss_pred EEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcc
Q 002094 758 YEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDR 837 (967)
Q Consensus 758 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 837 (967)
|||++|++|.+.+..... ++.. +|+.||+.||+|+|++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-- 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-- 392 (569)
T ss_dssp EECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC--
Confidence 999999999999987543 5543 58999999999999999999999999999999999999999999866432
Q ss_pred ccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCC
Q 002094 838 CILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRP 884 (967)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p 884 (967)
........||++|+|||++. +.+..++|+||+|++++++.++..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~--g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFA--ENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC-------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhC--CCCCCcccccccccchhhhccccch
Confidence 22334567999999999983 3567789999999998887765544
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=8.1e-28 Score=278.99 Aligned_cols=234 Identities=19% Similarity=0.199 Sum_probs=166.6
Q ss_pred CCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEcc
Q 002094 263 SCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVS 342 (967)
Q Consensus 263 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 342 (967)
+|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.|++.. ..++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 55556666665555555556666666666666666654443 555666666666666655322 12566666666
Q ss_pred CCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhccccccc
Q 002094 343 QNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYL 422 (967)
Q Consensus 343 ~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 422 (967)
+|.+++..+ ..+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+
T Consensus 108 ~N~l~~~~~-------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 156 (487)
T 3oja_A 108 NNNISRVSC-------------------------------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156 (487)
T ss_dssp SSCCCCEEE-------------------------------CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCC
T ss_pred CCcCCCCCc-------------------------------cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCC
Confidence 666653211 1245688888888888888788888888888888888888
Q ss_pred ccccCCCcC-CcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchh
Q 002094 423 FGSIPASIG-KLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAA 501 (967)
Q Consensus 423 ~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 501 (967)
.+..|..+. .+++|+.|+|++|.+++. | .+..+++|++|+|++|.|++. |..|..+++|+.|+|++|+|++ +|..
T Consensus 157 ~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~ 232 (487)
T 3oja_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKA 232 (487)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTT
T ss_pred CCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchh
Confidence 887777776 688888888888888865 3 234578888888888888854 4458888888888888888885 6777
Q ss_pred hhcccCccEEeccCCccc-cCCchhhhhccCCceEEec
Q 002094 502 IANLSNLKYVDLSFNDLS-GILPKELINLSHLLSFNIS 538 (967)
Q Consensus 502 ~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~ 538 (967)
+..+++|+.|++++|+++ +.+|..+..++.|+.++++
T Consensus 233 l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 233 LRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 888888888888888887 6777778888888777775
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1e-27 Score=278.18 Aligned_cols=234 Identities=18% Similarity=0.175 Sum_probs=129.6
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
++|++|+|++|++++..|..|+.+++|++|+|++|.+++.+| |+.+++|++|+|++|++++.. ..++|++|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 366777777777666666666666666666666666664433 456666666666666665322 225666666
Q ss_pred ecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCcc-CCCCccEEeccccccC
Q 002094 173 FSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIG-GCSMLKVLDFGVNSLS 251 (967)
Q Consensus 173 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~ 251 (967)
|++|+|++..+. .+++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..+. .+++|++|+|++|.|+
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 666666654443 235566666666666655555555556666666666666555555544 4555555555555555
Q ss_pred CCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCC-CCCChhh
Q 002094 252 GSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFT-GGLPESM 330 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~ 330 (967)
+.. .+..+++|+.|+|++|.|++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..+
T Consensus 183 ~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred ccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 431 12235555555555555554333 25555555555555555553 4444555555555555555554 3344444
Q ss_pred hcCCCCcEEEc
Q 002094 331 MNCGNLLAIDV 341 (967)
Q Consensus 331 ~~l~~L~~L~l 341 (967)
..++.|+.+++
T Consensus 259 ~~l~~L~~l~~ 269 (487)
T 3oja_A 259 SKNQRVQTVAK 269 (487)
T ss_dssp TTCHHHHHHHH
T ss_pred HhCCCCcEEec
Confidence 44444444444
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=7.8e-29 Score=297.46 Aligned_cols=415 Identities=15% Similarity=0.145 Sum_probs=239.2
Q ss_pred CeEecCCCccCccccccccCCCCCcEEEcCCCCCCC---CCC-----------chhhhcCCCCceEeccccccCCCCccc
Q 002094 96 QVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSG---LIP-----------DEFFRQCGSLREVSFANNNLTGPIPES 161 (967)
Q Consensus 96 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~---~ip-----------~~~~~~l~~L~~L~L~~n~l~~~~p~~ 161 (967)
+.++++++... .....+..+++|+.|+|+++.... ..| ..++..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 34555443222 122345667778888887765321 111 122345667777777777666555555
Q ss_pred cc-cccccceeeeccc-ccccc-cCccccccccCCeEeecCCcCCCccccccc----CCCCCCeeeccCcc--cccc-CC
Q 002094 162 LS-FCSSLESVNFSSN-RLSGQ-LPYGIWFLRSLQSLDLSNNLLEGEIVKGIS----NLYDLRAIKLGKNK--FSGQ-LP 231 (967)
Q Consensus 162 l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n~--l~~~-~~ 231 (967)
+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 54 5667777777666 44432 233334566677777766666554433332 44466666666654 2110 11
Q ss_pred cCccCCCCccEEecccc-ccCCCCChhhhcCCCCCEEEccCCC-------CCCcCchhhccccccccc-ccccccccccc
Q 002094 232 EDIGGCSMLKVLDFGVN-SLSGSLPDSLQRLNSCSSLSLKGNS-------FTGEVPDWIGKLANLESL-DLSLNQFSGRI 302 (967)
Q Consensus 232 ~~~~~l~~L~~L~l~~n-~l~~~~~~~l~~l~~L~~L~L~~n~-------l~~~~~~~l~~l~~L~~L-~L~~N~l~~~~ 302 (967)
..+..+++|++|++++| .+.+ ++..+..+++|+.|++..+. +.+ ++..+.++++|+.| .+.+... +.+
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l 281 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYL 281 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGG
T ss_pred HHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhH
Confidence 11233456666666655 2332 45555555666666544332 221 22234444555544 2222221 122
Q ss_pred CCCCCcccccceEEcccCcCCCCCC-hhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCccccc
Q 002094 303 PSSIGNLVFLKELNISMNQFTGGLP-ESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASM 381 (967)
Q Consensus 303 ~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 381 (967)
+..+..+++|++|+|++|.+++... ..+..+++|+.|++++| +. . ..+...
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~-----------------------~----~~l~~l 333 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IE-----------------------D----AGLEVL 333 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GH-----------------------H----HHHHHH
T ss_pred HHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cC-----------------------H----HHHHHH
Confidence 2223344455555555555432211 11334455555555444 21 1 111222
Q ss_pred ccCCCCccEEEccC---------CcccCCCCCCcc-cccccchhcccccccccccCCCcC-CcccccEEEec--C----C
Q 002094 382 KDSYQGLQVLDLSS---------NALSGVIPSNIG-DLSSLMLLNMSMNYLFGSIPASIG-KLKAIQVLDFS--D----N 444 (967)
Q Consensus 382 ~~~~~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N 444 (967)
...+++|++|++++ +.+++.....+. .+++|+.|.++.|.+++..+..+. .+++|+.|+++ + |
T Consensus 334 ~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~ 413 (594)
T 2p1m_B 334 ASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPD 413 (594)
T ss_dssp HHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCC
T ss_pred HHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcc
Confidence 33467788888843 445433222232 478899999999999876665565 58899999999 4 5
Q ss_pred cccc-----cCcccccCCCCCCEEEcCCCCCCCcCCccccc-cCccceeeccCCcCcCccchhh-hcccCccEEeccCCc
Q 002094 445 WLNG-----TIPPQIGGAVSLKELKLEKNFLSGRIPSQIKN-CSSLTSLILSQNNLTGPVPAAI-ANLSNLKYVDLSFND 517 (967)
Q Consensus 445 ~l~~-----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~ 517 (967)
.+++ .++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .++++|++|+|++|+
T Consensus 414 ~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~ 492 (594)
T 2p1m_B 414 YLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCP 492 (594)
T ss_dssp TTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCS
T ss_pred cccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCC
Confidence 5652 1222356788999999987 777665566665 8999999999999987766666 779999999999999
Q ss_pred cccCCch-hhhhccCCceEEecCCccc
Q 002094 518 LSGILPK-ELINLSHLLSFNISHNHLH 543 (967)
Q Consensus 518 l~~~~p~-~l~~l~~L~~L~l~~N~l~ 543 (967)
+++..+. ....+++|+.|++++|+++
T Consensus 493 ~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 493 FGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp CCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred CcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 9765544 3455899999999999885
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.8e-25 Score=239.99 Aligned_cols=225 Identities=22% Similarity=0.196 Sum_probs=172.0
Q ss_pred EEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCc
Q 002094 122 VDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNL 201 (967)
Q Consensus 122 L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 201 (967)
++.++..++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.
T Consensus 12 ~~c~~~~l~-~ip~~l---~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 12 YQCMELNFY-KIPDNL---PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EECTTSCCS-SCCSSS---CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEecCCCcc-ccCCCC---CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 344444444 455433 2456777777777776666667777777777777777776666667777777777777777
Q ss_pred CCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCC-CChhhhcCCCCCEEEccCCCCCCcCch
Q 002094 202 LEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGS-LPDSLQRLNSCSSLSLKGNSFTGEVPD 280 (967)
Q Consensus 202 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~ 280 (967)
+++..+..|.++++|++|++++|++++..+..++.+++|++|++++|++++. +|..|.++++|++|+|++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 7777777777777777777777777766666788888888888888888764 588888889999999999999887778
Q ss_pred hhccccccc----cccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCCC
Q 002094 281 WIGKLANLE----SLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNIP 351 (967)
Q Consensus 281 ~l~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 351 (967)
.+..+++|+ .|++++|++++..+..+ ...+|++|++++|++++..+..|..+++|+.|++++|++++..+
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 888888887 78999999986555444 44589999999999998877788999999999999999997765
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.2e-25 Score=235.80 Aligned_cols=207 Identities=23% Similarity=0.258 Sum_probs=127.1
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
++|++|+|++|++++..+..|..+++|++|+|++|++++ ++...|..+++|++|+|++|++++..+..|.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 467788888888777666677777777777777777763 3433456666666666666666655555666666666666
Q ss_pred ecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCC
Q 002094 173 FSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSG 252 (967)
Q Consensus 173 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 252 (967)
+++|++++..+..+..+++|++|+|++|.+++.. +|..|+.+++|++|++++|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-----------------------l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFK-----------------------LPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC-----------------------CCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceec-----------------------CchhhccCCCCCEEECCCCCCCc
Confidence 6666666544445555555555555555555421 24444455555555555555554
Q ss_pred CCChhhhcCCCCC----EEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCC
Q 002094 253 SLPDSLQRLNSCS----SLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTG 324 (967)
Q Consensus 253 ~~~~~l~~l~~L~----~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 324 (967)
..+..+..+++|+ .|++++|.+++..+..+.. .+|+.|+|++|++++..+..+..+++|+.|++++|.+..
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 4444444444444 6667777776554444433 467777777777776555556777777777777777764
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=9e-25 Score=233.70 Aligned_cols=211 Identities=18% Similarity=0.187 Sum_probs=144.9
Q ss_pred ccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcccccccccc
Q 002094 89 LLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSL 168 (967)
Q Consensus 89 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 168 (967)
+..+++|+.|++++|.++.. ..++.+++|++|+|++|.+++ ++ .+..+++|++|+|++|++++..+..|+.+++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 45667777777777777642 346677777777777777764 32 35677777777777777776666667777777
Q ss_pred ceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEecccc
Q 002094 169 ESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVN 248 (967)
Q Consensus 169 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 248 (967)
++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|++++|++++..+..|+.+++|++|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 77777777777666666677777777777777777666666677777777777777777666666677777777777777
Q ss_pred ccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccc
Q 002094 249 SLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVF 311 (967)
Q Consensus 249 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 311 (967)
++++..+..+..+++|+.|+|++|.+.+. +++|+.|++..|.++|.+|..++.+..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 77766666667777777777777766533 345666677777777766666665543
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.9e-25 Score=237.56 Aligned_cols=229 Identities=16% Similarity=0.150 Sum_probs=153.1
Q ss_pred CCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcccccccccccee
Q 002094 92 LQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESV 171 (967)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 171 (967)
+..+..+++.++.+... ..+..+++|+.|++++|.++ .++. +..+++|++|+|++|++++. ..++.+++|++|
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 90 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQG--IQYLPNVRYLALGGNKLHDI--SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCTT--GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-cccc--cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEE
Confidence 33455566666666644 34566777777777777776 3332 46777777777777777753 367777777777
Q ss_pred eecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccC
Q 002094 172 NFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS 251 (967)
Q Consensus 172 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 251 (967)
+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|+.+++|++|++++|+++
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 170 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC
Confidence 77777777666666677777777777777777666666777777777777777777666666667777777777777776
Q ss_pred CCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhh
Q 002094 252 GSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMM 331 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 331 (967)
+..+..|..+++|++|+|++|++++..+..+..+++|++|++++|.+.+. +++|+.|+++.|+++|.+|..++
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 66555666667777777777777666666666666666666666665533 33566666666666666666555
Q ss_pred cCC
Q 002094 332 NCG 334 (967)
Q Consensus 332 ~l~ 334 (967)
.+.
T Consensus 244 ~~~ 246 (272)
T 3rfs_A 244 SVA 246 (272)
T ss_dssp CBC
T ss_pred ccC
Confidence 443
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=5.9e-24 Score=227.17 Aligned_cols=205 Identities=20% Similarity=0.203 Sum_probs=122.5
Q ss_pred CCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEee
Q 002094 118 TLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDL 197 (967)
Q Consensus 118 ~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (967)
.++.+++++++++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCEEEccCCCCC-ccCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 4566666666666 455433 245666666666666555555666666666666666655444444455555555555
Q ss_pred cCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCc
Q 002094 198 SNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGE 277 (967)
Q Consensus 198 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 277 (967)
++|.+++..+.. |.++++|++|++++|++++..+..|..+++|++|+|++|.+++.
T Consensus 93 ~~n~l~~~~~~~------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 148 (270)
T 2o6q_A 93 TDNKLQALPIGV------------------------FDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148 (270)
T ss_dssp CSSCCCCCCTTT------------------------TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCcCCcCCHhH------------------------cccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc
Confidence 555555444444 44455555555555555544445555555555566666665555
Q ss_pred CchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCCC
Q 002094 278 VPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGNI 350 (967)
Q Consensus 278 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 350 (967)
.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++....
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 5555666666666666666666555555666777777777777777666666777777777777777776544
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=7.9e-24 Score=228.12 Aligned_cols=204 Identities=23% Similarity=0.224 Sum_probs=103.1
Q ss_pred ccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccC
Q 002094 113 LASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSL 192 (967)
Q Consensus 113 ~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (967)
++.+++|+.+++++|.++ .+|..++ ++|++|+|++|++++..+..|..+++|++|+|++|+|++..+. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 344455555555555554 3444331 4555555555555555555555555555555555555533221 344455
Q ss_pred CeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCC
Q 002094 193 QSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGN 272 (967)
Q Consensus 193 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 272 (967)
++|+|++|.++ .+|..+..+++|++|++++|+|++..+..|.++++|++|+|++|
T Consensus 80 ~~L~Ls~N~l~-------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 80 GTLDLSHNQLQ-------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECCSSCCS-------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 55555555444 23333444444444444444444433444444445555555555
Q ss_pred CCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcC
Q 002094 273 SFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTG 348 (967)
Q Consensus 273 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 348 (967)
+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++..
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 554444444455555555555555555433334455555555555555555 444555555566666666666653
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=6.1e-26 Score=251.42 Aligned_cols=264 Identities=20% Similarity=0.202 Sum_probs=163.7
Q ss_pred CCccceEEeCCCCCeeeeeeecCCCCCccccccccCC--CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCC-
Q 002094 56 PCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRL--QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGL- 132 (967)
Q Consensus 56 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~- 132 (967)
|+.|+++.|++ ..++.+++.++.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 45799999874 34667788777665 3456666 7888888888888876555 55678888888888877654
Q ss_pred CCchhhhcCCCCceEeccccccCCCCccccccccccceeeeccc-ccccc-cCccccccccCCeEeecCC-cCCCc-ccc
Q 002094 133 IPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSN-RLSGQ-LPYGIWFLRSLQSLDLSNN-LLEGE-IVK 208 (967)
Q Consensus 133 ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~n-~l~~~-~~~ 208 (967)
+| ..+..+++|++|+|++|++++..+..++.+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++. ++.
T Consensus 110 ~~-~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 110 LH-GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HH-HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HH-HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 33 34577778888888888777777777777777777777777 56653 5555667777777777777 77654 455
Q ss_pred cccCCC-CCCeeeccCc--ccc-ccCCcCccCCCCccEEeccccc-cCCCCChhhhcCCCCCEEEccCCC-CCCcCchhh
Q 002094 209 GISNLY-DLRAIKLGKN--KFS-GQLPEDIGGCSMLKVLDFGVNS-LSGSLPDSLQRLNSCSSLSLKGNS-FTGEVPDWI 282 (967)
Q Consensus 209 ~~~~l~-~L~~L~L~~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l 282 (967)
.+..++ +|++|+|++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|+|++|. +.......+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 566666 6777777776 333 3344455556666666666666 454555555556666666666653 221111234
Q ss_pred ccccccccccccccccccccCCCCCccc-ccceEEcccCcCCCCCChhh
Q 002094 283 GKLANLESLDLSLNQFSGRIPSSIGNLV-FLKELNISMNQFTGGLPESM 330 (967)
Q Consensus 283 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~ 330 (967)
..+++|++|++++| ++ ...+..+. .++.|++++|++++..|..+
T Consensus 269 ~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 269 GEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred hcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 45555555555555 21 11223332 24444455555554444433
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.1e-23 Score=226.98 Aligned_cols=206 Identities=24% Similarity=0.219 Sum_probs=165.3
Q ss_pred cccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCcc
Q 002094 162 LSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLK 241 (967)
Q Consensus 162 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 241 (967)
++.+++|+++++++|+++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|++++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 444555555555555555 3343332 4566666666666666666666677777777777777654332 6789999
Q ss_pred EEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCc
Q 002094 242 VLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQ 321 (967)
Q Consensus 242 ~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 321 (967)
+|++++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 678889999999999999999998888999999999999999999998877788999999999999999
Q ss_pred CCCCCChhhhcCCCCcEEEccCCcCcCCCChhhhc-ccccEEeccCCCCCCCCC
Q 002094 322 FTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWIFK-MGLQTVSLSGNRLGESMQ 374 (967)
Q Consensus 322 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~L~~n~l~~~~~ 374 (967)
+++..+..|..+++|+.|+|++|+++ .+|..++. ..|+.|+|++|++.....
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 99887888899999999999999999 56666555 489999999999976443
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=5.5e-24 Score=232.38 Aligned_cols=224 Identities=15% Similarity=0.190 Sum_probs=163.7
Q ss_pred CCcEEEcCCCCCCCCCCchh--hhcCCCCceEeccccccCCCCcccc--ccccccceeeecccccccccC----cccccc
Q 002094 118 TLQVVDFSENNLSGLIPDEF--FRQCGSLREVSFANNNLTGPIPESL--SFCSSLESVNFSSNRLSGQLP----YGIWFL 189 (967)
Q Consensus 118 ~L~~L~Ls~n~~~~~ip~~~--~~~l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l 189 (967)
.++.|.++++.++...-..+ +..+++|++|+|++|++++..|..+ +.+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 45666666666542111111 2245678888888888888888777 788888888888888886554 334568
Q ss_pred ccCCeEeecCCcCCCcccccccCCCCCCeeeccCcccccc--C--CcCccCCCCccEEeccccccCCCCCh----hhhcC
Q 002094 190 RSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQ--L--PEDIGGCSMLKVLDFGVNSLSGSLPD----SLQRL 261 (967)
Q Consensus 190 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~l~~n~l~~~~~~----~l~~l 261 (967)
++|++|+|++|.+++..+..|+++++|++|+|++|++.+. + +..++.+++|++|++++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 8888888888888888888888888888888888887642 2 2334678888888888888863 233 25677
Q ss_pred CCCCEEEccCCCCCCcCchhhccc---cccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcE
Q 002094 262 NSCSSLSLKGNSFTGEVPDWIGKL---ANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLA 338 (967)
Q Consensus 262 ~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 338 (967)
++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 888888888888887777666666 58888888888888 5666664 6888888888888854 33 577788888
Q ss_pred EEccCCcCc
Q 002094 339 IDVSQNKLT 347 (967)
Q Consensus 339 L~l~~N~l~ 347 (967)
|++++|+++
T Consensus 299 L~L~~N~l~ 307 (310)
T 4glp_A 299 LTLDGNPFL 307 (310)
T ss_dssp EECSSTTTS
T ss_pred EECcCCCCC
Confidence 888888876
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.1e-25 Score=246.95 Aligned_cols=253 Identities=17% Similarity=0.160 Sum_probs=136.9
Q ss_pred EecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCc---hhhhcCC-CCceEeccccccCCCCccccccc-----ccc
Q 002094 98 LSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPD---EFFRQCG-SLREVSFANNNLTGPIPESLSFC-----SSL 168 (967)
Q Consensus 98 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~---~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~L 168 (967)
+.|++|++++.+|..+...++|++|||++|.+++..+. ..|..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 44555555555555555555555666665555532221 2344555 56666666666665555555554 566
Q ss_pred ceeeecccccccccCcccccc-----ccCCeEeecCCcCCCccccccc----C-CCCCCeeeccCccccccCC----cCc
Q 002094 169 ESVNFSSNRLSGQLPYGIWFL-----RSLQSLDLSNNLLEGEIVKGIS----N-LYDLRAIKLGKNKFSGQLP----EDI 234 (967)
Q Consensus 169 ~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~----~-l~~L~~L~L~~n~l~~~~~----~~~ 234 (967)
++|+|++|++++..+..+... ++|++|+|++|.+++..+..+. . .++|++|+|++|++++... ..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 666666666655444433332 5566666666666555444332 2 1456666666666653222 223
Q ss_pred cCCC-CccEEeccccccCCCCChhhh----cC-CCCCEEEccCCCCCCc----Cchhhcc-ccccccccccccccccccC
Q 002094 235 GGCS-MLKVLDFGVNSLSGSLPDSLQ----RL-NSCSSLSLKGNSFTGE----VPDWIGK-LANLESLDLSLNQFSGRIP 303 (967)
Q Consensus 235 ~~l~-~L~~L~l~~n~l~~~~~~~l~----~l-~~L~~L~L~~n~l~~~----~~~~l~~-l~~L~~L~L~~N~l~~~~~ 303 (967)
..++ +|++|++++|++++..+..+. .+ ++|++|+|++|.|++. ++..+.. .++|++|+|++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 3333 666666666666655544333 23 4666666666666642 2333433 2366666666666654322
Q ss_pred ----CCCCcccccceEEcccCcCCCCCC-------hhhhcCCCCcEEEccCCcCcCCC
Q 002094 304 ----SSIGNLVFLKELNISMNQFTGGLP-------ESMMNCGNLLAIDVSQNKLTGNI 350 (967)
Q Consensus 304 ----~~~~~l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~l~~N~l~~~~ 350 (967)
..+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++....
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 234555667777777776443332 24556666777777777776443
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.4e-23 Score=221.67 Aligned_cols=191 Identities=18% Similarity=0.256 Sum_probs=107.2
Q ss_pred CCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCc
Q 002094 56 PCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPD 135 (967)
Q Consensus 56 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~ 135 (967)
||.|.|++|.. ....+++.+++++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.+++ ++.
T Consensus 4 Cp~~~gC~C~~---~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~ 76 (251)
T 3m19_A 4 CETVTGCTCNE---GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSA 76 (251)
T ss_dssp CHHHHSSEEEG---GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-CCT
T ss_pred CCCCCceEcCC---CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-cCH
Confidence 68999999953 23345666666553 343333 456666666666666655566666666666666666653 333
Q ss_pred hhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCC
Q 002094 136 EFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYD 215 (967)
Q Consensus 136 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 215 (967)
..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---------------------- 134 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK---------------------- 134 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC----------------------
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCccc----------------------
Confidence 3345555555555555555554444555555555555555555544444444444444
Q ss_pred CCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCc
Q 002094 216 LRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGE 277 (967)
Q Consensus 216 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 277 (967)
+|+|++|++++..+..|+.+++|++|++++|++++..+..|..+++|+.|+|++|.++..
T Consensus 135 --~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 135 --ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp --EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred --EEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 445555554444444455555555555555555555555555666666666666666543
No 336
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.5e-24 Score=253.44 Aligned_cols=186 Identities=16% Similarity=0.198 Sum_probs=146.0
Q ss_pred CCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccc-------cHHHHHHHHHHHcCCCCCceeeeeeEEEcCCceeEEE
Q 002094 686 KDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIK-------SQEDFEKEMKTLGKIRHHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 686 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 758 (967)
..+.||+|+||.||+|.. .++.+++|+........ ..+++.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356899999999999954 48899999875433211 1345899999999999999997777777778889999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCccc
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRC 838 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 838 (967)
||+++++|.+++.. +..++.|+++||+|||+++|+||||||+||+++. .+||+|||+++........
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~ 485 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK 485 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence 99999999999875 4579999999999999999999999999999998 9999999999877542221
Q ss_pred c-----ccccccccccccCcccccC-cccCCcccchhhHHHHHHHHHcCCCCC
Q 002094 839 I-----LSSKIQSALGYMAPEFACR-TVKITEKCDVYGFGVLVLEVVTGKRPV 885 (967)
Q Consensus 839 ~-----~~~~~~gt~~y~aPE~~~~-~~~~t~~~Dv~slGvll~elltg~~p~ 885 (967)
. ......||+.|+|||++.. ...|+..+|+|+..+-..+-+.++.+|
T Consensus 486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1 1235679999999999832 145778899999998888888777766
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2.9e-25 Score=250.82 Aligned_cols=247 Identities=22% Similarity=0.281 Sum_probs=156.4
Q ss_pred ccccccCCCCCCeEecCCCccCcccc----ccccCCCCCcEEEcCCC---CCCCCCCchh------hhcCCCCceEeccc
Q 002094 85 IGRGLLRLQFLQVLSLSNNNFTGTIN----ADLASFGTLQVVDFSEN---NLSGLIPDEF------FRQCGSLREVSFAN 151 (967)
Q Consensus 85 ~~~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~Ls~n---~~~~~ip~~~------~~~l~~L~~L~L~~ 151 (967)
+...+..+++|++|+|++|++++..+ ..+..+++|++|+|++| ++++.+|..+ +..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 45667788999999999999987643 45778999999999986 4455566554 46778888888888
Q ss_pred cccCC----CCccccccccccceeeecccccccccCcccc----cc---------ccCCeEeecCCcCCC-ccc---ccc
Q 002094 152 NNLTG----PIPESLSFCSSLESVNFSSNRLSGQLPYGIW----FL---------RSLQSLDLSNNLLEG-EIV---KGI 210 (967)
Q Consensus 152 n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~n~l~~-~~~---~~~ 210 (967)
|++++ .+|..+..+++|++|+|++|++++..+..+. .+ ++|++|+|++|.++. ..+ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 88887 4666778888888888888888754444333 33 777777777777762 233 345
Q ss_pred cCCCCCCeeeccCccccc-----cCCcCccCCCCccEEeccccccC----CCCChhhhcCCCCCEEEccCCCCCCcCchh
Q 002094 211 SNLYDLRAIKLGKNKFSG-----QLPEDIGGCSMLKVLDFGVNSLS----GSLPDSLQRLNSCSSLSLKGNSFTGEVPDW 281 (967)
Q Consensus 211 ~~l~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 281 (967)
..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++ ..+|..+..+++|+.|+|++|.+++.....
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 566666666666666652 22335555555666665555553 334444555555555555555544331100
Q ss_pred hccccccccccccccccccccCCCC--CcccccceEEcccCcCCC----CCChhh-hcCCCCcEEEccCCcCcCCCC
Q 002094 282 IGKLANLESLDLSLNQFSGRIPSSI--GNLVFLKELNISMNQFTG----GLPESM-MNCGNLLAIDVSQNKLTGNIP 351 (967)
Q Consensus 282 l~~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~p 351 (967)
++..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|++++..+
T Consensus 264 --------------------l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 264 --------------------VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp --------------------HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred --------------------HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 22233 225556666666666664 345555 456677777777777765553
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.2e-23 Score=218.48 Aligned_cols=196 Identities=18% Similarity=0.188 Sum_probs=134.9
Q ss_pred CCCeEecCCCccCccccccccCCCCCcEEEcCCCC-CCCCCCchhhhcCCCCceEeccc-cccCCCCcccccccccccee
Q 002094 94 FLQVLSLSNNNFTGTINADLASFGTLQVVDFSENN-LSGLIPDEFFRQCGSLREVSFAN-NNLTGPIPESLSFCSSLESV 171 (967)
Q Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-~~~~ip~~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L 171 (967)
+|++|+|++|++++..+..|+.+++|++|+|++|+ ++ .++...|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 78899999999988777788888888888888886 66 56665678888888888887 88887766778888888888
Q ss_pred eecccccccccCccccccccCC---eEeecCC-cCCCcccccccCCCCCC-eeeccCccccccCCcCccCCCCccEEecc
Q 002094 172 NFSSNRLSGQLPYGIWFLRSLQ---SLDLSNN-LLEGEIVKGISNLYDLR-AIKLGKNKFSGQLPEDIGGCSMLKVLDFG 246 (967)
Q Consensus 172 ~L~~N~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 246 (967)
+|++|++++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++...+..|.. ++|++|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888875 555 66777777 7777777 77766666677777777 7777777776333333433 566666666
Q ss_pred ccc-cCCCCChhhhcC-CCCCEEEccCCCCCCcCchhhcccccccccccccc
Q 002094 247 VNS-LSGSLPDSLQRL-NSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLN 296 (967)
Q Consensus 247 ~n~-l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N 296 (967)
+|+ +++..+..|.++ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 663 654445555555 5555565555555533222 3444555554443
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=2.4e-23 Score=231.26 Aligned_cols=246 Identities=16% Similarity=0.158 Sum_probs=174.9
Q ss_pred CCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCC
Q 002094 55 NPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIP 134 (967)
Q Consensus 55 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip 134 (967)
|-|.|+.|.|+.. +++ .+|..+ .+++++|+|++|+|+...+.+|+++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~~~------------~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 7 CHCSNRVFLCQES------------KVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp SEEETTEEEEEST------------TCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred cEeeCCEEEecCC------------CCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 3478999999642 222 245444 3579999999999997777789999999999999999988888
Q ss_pred chhhhcCCCCce-EeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecC-CcCCCcccccccC
Q 002094 135 DEFFRQCGSLRE-VSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSN-NLLEGEIVKGISN 212 (967)
Q Consensus 135 ~~~~~~l~~L~~-L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~ 212 (967)
...|.++++|++ +.+++|+++...|..|..+++|++|++++|+|++..+..+....++..|++.+ |.+....+..|..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 888899988775 66677899988888899999999999999999877666777777888888865 5677666667776
Q ss_pred CC-CCCeeeccCccccccCCcCccCCCCccEEeccc-cccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccc
Q 002094 213 LY-DLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGV-NSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLES 290 (967)
Q Consensus 213 l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 290 (967)
+. .++.|+|++|+|+.. +.......+|++|++++ |.++...+..|.++++|+.|+|++|+|+...+..+.++++|+.
T Consensus 152 ~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~ 230 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA 230 (350)
T ss_dssp SBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEEC
T ss_pred cchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhh
Confidence 64 577788888888744 33333456777777764 5555444455677777777777777777555555555555555
Q ss_pred ccccccccccccCCCCCcccccceEEcccC
Q 002094 291 LDLSLNQFSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 291 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
+++. .+. .+| .+.++++|+.+++.++
T Consensus 231 l~~~--~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 231 RSTY--NLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TTCT--TCC-CCC-CTTTCCSCCEEECSCH
T ss_pred ccCC--CcC-cCC-CchhCcChhhCcCCCC
Confidence 4432 233 334 3555566666665443
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.9e-24 Score=241.51 Aligned_cols=257 Identities=16% Similarity=0.140 Sum_probs=209.7
Q ss_pred eeecCCCCCccccccccCCCCCCeEecCCCccCcccc----ccccCCC-CCcEEEcCCCCCCCCCCchhhhcC-----CC
Q 002094 74 LTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTIN----ADLASFG-TLQVVDFSENNLSGLIPDEFFRQC-----GS 143 (967)
Q Consensus 74 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~Ls~n~~~~~ip~~~~~~l-----~~ 143 (967)
.++..++++|.++..+...++|++|+|++|++++..+ ..|..++ +|++|+|++|.+++..+.. +..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~-l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDE-LVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHH-HHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHH-HHHHHhccCCC
Confidence 4677889999988888888889999999999998877 7888998 9999999999999766654 3554 99
Q ss_pred CceEeccccccCCCCccccccc-----cccceeeecccccccccCccccc-----cccCCeEeecCCcCCCcccc----c
Q 002094 144 LREVSFANNNLTGPIPESLSFC-----SSLESVNFSSNRLSGQLPYGIWF-----LRSLQSLDLSNNLLEGEIVK----G 209 (967)
Q Consensus 144 L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~n~l~~~~~~----~ 209 (967)
|++|+|++|++++..+..++.. ++|++|+|++|+|++..+..+.. .++|++|+|++|.+++.... .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999998888766554 89999999999999776655543 36999999999999965544 4
Q ss_pred ccCCC-CCCeeeccCccccccCCcCcc----CC-CCccEEeccccccCCC----CChhhhcC-CCCCEEEccCCCCCCcC
Q 002094 210 ISNLY-DLRAIKLGKNKFSGQLPEDIG----GC-SMLKVLDFGVNSLSGS----LPDSLQRL-NSCSSLSLKGNSFTGEV 278 (967)
Q Consensus 210 ~~~l~-~L~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~l~~n~l~~~----~~~~l~~l-~~L~~L~L~~n~l~~~~ 278 (967)
+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.|++. ++..+..+ ++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45565 999999999999977765444 44 6999999999999864 45566664 59999999999999765
Q ss_pred c----hhhcccccccccccccccccc-------ccCCCCCcccccceEEcccCcCCCCCChhhh
Q 002094 279 P----DWIGKLANLESLDLSLNQFSG-------RIPSSIGNLVFLKELNISMNQFTGGLPESMM 331 (967)
Q Consensus 279 ~----~~l~~l~~L~~L~L~~N~l~~-------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 331 (967)
+ ..+..+++|++|+|++|.+.+ .++..+..+++|+.|++++|++.+..+..+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHH
Confidence 5 345677999999999999543 2445788899999999999999876555443
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3.6e-25 Score=250.06 Aligned_cols=268 Identities=21% Similarity=0.224 Sum_probs=153.2
Q ss_pred ChhhhcCCCCCEEEccCCCCCCcCc----hhhcccccccccccccc---ccccccCCC-------CCcccccceEEcccC
Q 002094 255 PDSLQRLNSCSSLSLKGNSFTGEVP----DWIGKLANLESLDLSLN---QFSGRIPSS-------IGNLVFLKELNISMN 320 (967)
Q Consensus 255 ~~~l~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~L~~N---~l~~~~~~~-------~~~l~~L~~L~L~~N 320 (967)
+..+..+++|+.|+|++|.++...+ ..+..+++|++|+|++| ++.+.+|.. +..+++|++|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 3444444444555555554443322 22334555555555543 222233322 356677777788777
Q ss_pred cCCC----CCChhhhcCCCCcEEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCC
Q 002094 321 QFTG----GLPESMMNCGNLLAIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSN 396 (967)
Q Consensus 321 ~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N 396 (967)
++++ .+|..+..+++|+.|+|++|.++...+..+... +..+ ..|++ ....++|++|+|++|
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~l--~~~~~------------~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA-LQEL--AVNKK------------AKNAPPLRSIICGRN 169 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-HHHH--HHHHH------------HHTCCCCCEEECCSS
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-HHHH--hhhhh------------cccCCCCcEEECCCC
Confidence 7776 356677778888888888887753333222210 0000 00000 000156667777777
Q ss_pred ccc-CCCC---CCcccccccchhcccccccc--c---ccCCCcCCcccccEEEecCCccc----ccCcccccCCCCCCEE
Q 002094 397 ALS-GVIP---SNIGDLSSLMLLNMSMNYLF--G---SIPASIGKLKAIQVLDFSDNWLN----GTIPPQIGGAVSLKEL 463 (967)
Q Consensus 397 ~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L 463 (967)
+++ +.++ ..+..+++|++|+|++|++. + ..+..+..+++|+.|+|++|.++ +.+|..+..+++|++|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 665 2223 34455666777777777665 2 34446677777777777777775 4566667777777777
Q ss_pred EcCCCCCCCc----CCcccc--ccCccceeeccCCcCcC----ccchhh-hcccCccEEeccCCccccCCc--hhhh-hc
Q 002094 464 KLEKNFLSGR----IPSQIK--NCSSLTSLILSQNNLTG----PVPAAI-ANLSNLKYVDLSFNDLSGILP--KELI-NL 529 (967)
Q Consensus 464 ~L~~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p--~~l~-~l 529 (967)
+|++|.|++. +|..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..+ ..+. .+
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l 329 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVF 329 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHH
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHh
Confidence 7777777654 455553 37777777777777776 366665 557777777777777776653 3332 34
Q ss_pred cCCceEEe
Q 002094 530 SHLLSFNI 537 (967)
Q Consensus 530 ~~L~~L~l 537 (967)
++++.+++
T Consensus 330 ~~~~~~~l 337 (386)
T 2ca6_A 330 STRGRGEL 337 (386)
T ss_dssp HHHTCCEE
T ss_pred hhcCcchh
Confidence 44444444
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=229.41 Aligned_cols=228 Identities=18% Similarity=0.201 Sum_probs=189.0
Q ss_pred CCCCCCeEecCCCccCccccc---cccCCCCCcEEEcCCCCCCCCCCchhh-hcCCCCceEeccccccCCCCc----ccc
Q 002094 91 RLQFLQVLSLSNNNFTGTINA---DLASFGTLQVVDFSENNLSGLIPDEFF-RQCGSLREVSFANNNLTGPIP----ESL 162 (967)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~Ls~n~~~~~ip~~~~-~~l~~L~~L~L~~n~l~~~~p----~~l 162 (967)
+-..++.|.++++.++...-. .+..+++|++|+|++|.+++.+|..++ ..+++|++|+|++|++++..+ ..+
T Consensus 62 ~~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~ 141 (310)
T 4glp_A 62 KALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQ 141 (310)
T ss_dssp SSCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHT
T ss_pred hhcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHh
Confidence 344578899999888643111 223457799999999999998888766 889999999999999998665 345
Q ss_pred ccccccceeeecccccccccCccccccccCCeEeecCCcCCCc--c--cccccCCCCCCeeeccCccccccCCc----Cc
Q 002094 163 SFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGE--I--VKGISNLYDLRAIKLGKNKFSGQLPE----DI 234 (967)
Q Consensus 163 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~n~l~~~~~~----~~ 234 (967)
..+++|++|+|++|++++..|..|..+++|++|+|++|++.+. . +..+..+++|++|+|++|+++.. +. .+
T Consensus 142 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 220 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALA 220 (310)
T ss_dssp TBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHH
T ss_pred hhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHH
Confidence 6799999999999999988889999999999999999998753 2 23347899999999999999732 22 35
Q ss_pred cCCCCccEEeccccccCCCCChhhhcC---CCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccc
Q 002094 235 GGCSMLKVLDFGVNSLSGSLPDSLQRL---NSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVF 311 (967)
Q Consensus 235 ~~l~~L~~L~l~~n~l~~~~~~~l~~l---~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 311 (967)
+.+++|++|++++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|++++. |. +..+++
T Consensus 221 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~ 295 (310)
T 4glp_A 221 AAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPE 295 (310)
T ss_dssp HHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCC
T ss_pred hcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCC
Confidence 788999999999999998888888777 69999999999999 5676664 8999999999999964 43 788999
Q ss_pred cceEEcccCcCCC
Q 002094 312 LKELNISMNQFTG 324 (967)
Q Consensus 312 L~~L~L~~N~l~~ 324 (967)
|+.|+|++|++++
T Consensus 296 L~~L~L~~N~l~~ 308 (310)
T 4glp_A 296 VDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECSSTTTSC
T ss_pred ccEEECcCCCCCC
Confidence 9999999999974
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.6e-24 Score=240.07 Aligned_cols=253 Identities=16% Similarity=0.166 Sum_probs=156.2
Q ss_pred CCCeEecCCCccCccccccccCC--CCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCC-Cccccccccccce
Q 002094 94 FLQVLSLSNNNFTGTINADLASF--GTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGP-IPESLSFCSSLES 170 (967)
Q Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~ 170 (967)
.++.|++++|++. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|++++. +|..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3677777777766 3455555 6777777777777765554 23567777777777777654 5666677777777
Q ss_pred eeecccccccccCccccccccCCeEeecCC-cCCCc-ccccccCCCCCCeeeccCc-ccccc-CCcCccCCC-CccEEec
Q 002094 171 VNFSSNRLSGQLPYGIWFLRSLQSLDLSNN-LLEGE-IVKGISNLYDLRAIKLGKN-KFSGQ-LPEDIGGCS-MLKVLDF 245 (967)
Q Consensus 171 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~l 245 (967)
|+|++|++++..+..+..+++|++|+|++| .+++. .+..+.++++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 777777777666666667777777777777 56542 4555666677777777777 66643 455566666 7777777
Q ss_pred ccc--ccC-CCCChhhhcCCCCCEEEccCCC-CCCcCchhhccccccccccccccc-cccccCCCCCcccccceEEcccC
Q 002094 246 GVN--SLS-GSLPDSLQRLNSCSSLSLKGNS-FTGEVPDWIGKLANLESLDLSLNQ-FSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 246 ~~n--~l~-~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
++| .++ +.++..+..+++|+.|+|++|. +++..+..+..+++|++|++++|. +.......+.++++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 776 343 3345556666677777777666 555555566666666666666663 22221124556666666666666
Q ss_pred cCCCCCChhhhcCCCCcEEEccCCcCcCCCChhh
Q 002094 321 QFTGGLPESMMNCGNLLAIDVSQNKLTGNIPTWI 354 (967)
Q Consensus 321 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 354 (967)
++......+. .++..|++++|++++..|..+
T Consensus 283 -i~~~~~~~l~--~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 283 -VPDGTLQLLK--EALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp -SCTTCHHHHH--HHSTTSEESCCCSCCTTCSSC
T ss_pred -cCHHHHHHHH--hhCcceEEecccCccccCCcc
Confidence 3322222221 124444566666666555443
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.7e-23 Score=215.30 Aligned_cols=211 Identities=18% Similarity=0.199 Sum_probs=182.0
Q ss_pred CCcc-ce--EEeCC------CCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCc-cCccccccccCCCCCcEEEcC
Q 002094 56 PCNW-VG--VKCDP------KTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNN-FTGTINADLASFGTLQVVDFS 125 (967)
Q Consensus 56 ~c~w-~g--v~c~~------~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls 125 (967)
.|.+ .+ |.|.. -...++.|++.++.+++..+..+.++++|++|+|++|+ +++..+..|..+++|++|+|+
T Consensus 9 ~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~ 88 (239)
T 2xwt_C 9 ECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIR 88 (239)
T ss_dssp SEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEE
T ss_pred eeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECC
Confidence 4543 44 55964 23478999999999998877789999999999999997 888877899999999999999
Q ss_pred C-CCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccc---eeeeccc-ccccccCccccccccCC-eEeecC
Q 002094 126 E-NNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLE---SVNFSSN-RLSGQLPYGIWFLRSLQ-SLDLSN 199 (967)
Q Consensus 126 ~-n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~ 199 (967)
+ |+++ .+|...|.++++|++|+|++|++++ +|. |+.+++|+ +|++++| ++++..+..|..+++|+ +|+|++
T Consensus 89 ~~n~l~-~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 89 NTRNLT-YIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EETTCC-EECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCee-EcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 9 9998 5666678999999999999999997 665 88899998 9999999 99988778899999999 999999
Q ss_pred CcCCCcccccccCCCCCCeeeccCcc-ccccCCcCccCC-CCccEEeccccccCCCCChhhhcCCCCCEEEccCCC
Q 002094 200 NLLEGEIVKGISNLYDLRAIKLGKNK-FSGQLPEDIGGC-SMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNS 273 (967)
Q Consensus 200 n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 273 (967)
|.++...+..|.. ++|+.|+|++|+ +++..+..|.++ ++|++|++++|++++. |.. .+++|+.|+++++.
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 9999665556666 899999999995 998778889999 9999999999999954 443 67899999998763
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.2e-22 Score=211.20 Aligned_cols=179 Identities=21% Similarity=0.238 Sum_probs=108.5
Q ss_pred cceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccc
Q 002094 168 LESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGV 247 (967)
Q Consensus 168 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 247 (967)
.++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 334444444444 2333222 3445555555555544444555555555555555555555555555556666666666
Q ss_pred cccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCC
Q 002094 248 NSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLP 327 (967)
Q Consensus 248 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 327 (967)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 66665555556666666666666666665555556667777777777777765555567777777777777777776666
Q ss_pred hhhhcCCCCcEEEccCCcCcCC
Q 002094 328 ESMMNCGNLLAIDVSQNKLTGN 349 (967)
Q Consensus 328 ~~~~~l~~L~~L~l~~N~l~~~ 349 (967)
..|..+++|+.|++++|++.+.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHhCCCCCCEEEeeCCceeCC
Confidence 6777777777777777777765
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.2e-23 Score=243.18 Aligned_cols=212 Identities=23% Similarity=0.382 Sum_probs=169.5
Q ss_pred cccCCCCCCCCCCC-----ccceE-EeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCC
Q 002094 44 EKLTSWSEDDDNPC-----NWVGV-KCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFG 117 (967)
Q Consensus 44 ~~l~sw~~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 117 (967)
..+.+|..+. .+| .|.|+ .|.. .+++.|++.++++++ +|..+. ++|++|+|++|+|+ .+| ..++
T Consensus 31 ~~l~~W~~~~-~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~ 100 (571)
T 3cvr_A 31 SAWDKWEKQA-LPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPA 100 (571)
T ss_dssp HHHHHHHTTC-CTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCT
T ss_pred HHHHHHhccC-Cccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccC
Confidence 3567786543 468 79999 8863 478999999999988 777664 88999999999998 556 5678
Q ss_pred CCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEee
Q 002094 118 TLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDL 197 (967)
Q Consensus 118 ~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (967)
+|++|+|++|++++ +|. + .. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 101 ~L~~L~Ls~N~l~~-ip~-l-~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 101 SLEYLDACDNRLST-LPE-L-PA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TCCEEECCSSCCSC-CCC-C-CT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCEEEccCCCCCC-cch-h-hc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 99999999999996 777 3 43 89999999999997 565 68899999999999986 565 5789999999
Q ss_pred cCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCc-------cEEeccccccCCCCChhhhcCCCCCEEEcc
Q 002094 198 SNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSML-------KVLDFGVNSLSGSLPDSLQRLNSCSSLSLK 270 (967)
Q Consensus 198 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~ 270 (967)
++|.|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| ++|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~ 238 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILE 238 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECC
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEee
Confidence 9999987 444 65 88999999999998 5565 554 66 88888888888 577777778888888888
Q ss_pred CCCCCCcCchhhccccc
Q 002094 271 GNSFTGEVPDWIGKLAN 287 (967)
Q Consensus 271 ~n~l~~~~~~~l~~l~~ 287 (967)
+|.+++.+|..+..++.
T Consensus 239 ~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 239 DNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SSSCCHHHHHHHHHHHH
T ss_pred CCcCCCcCHHHHHHhhc
Confidence 88888888877776554
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.1e-22 Score=205.99 Aligned_cols=187 Identities=20% Similarity=0.241 Sum_probs=144.1
Q ss_pred CCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCC
Q 002094 54 DNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLI 133 (967)
Q Consensus 54 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~i 133 (967)
.|.|.|++|.|+... ++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|+++ .+
T Consensus 4 ~C~C~~~~v~c~~~~--l~-----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~ 67 (208)
T 2o6s_A 4 RCSCSGTTVECYSQG--RT-----------SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SL 67 (208)
T ss_dssp TCEEETTEEECCSSC--CS-----------SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CC
T ss_pred CCEECCCEEEecCCC--cc-----------CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-cc
Confidence 356899999997431 11 123222 357899999999999877777888999999999999988 56
Q ss_pred CchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCC
Q 002094 134 PDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNL 213 (967)
Q Consensus 134 p~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 213 (967)
|...|..+++|++|+|++|++++..+..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|.+++..+..|..+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 66667888899999999998887777778888888888888888887766677888888888888888887777777888
Q ss_pred CCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCC
Q 002094 214 YDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNS 263 (967)
Q Consensus 214 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 263 (967)
++|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 148 ~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 888888888887653 3456777777777777777776665543
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.7e-22 Score=218.37 Aligned_cols=207 Identities=22% Similarity=0.344 Sum_probs=108.5
Q ss_pred EecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccc
Q 002094 98 LSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNR 177 (967)
Q Consensus 98 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 177 (967)
+.+..+.+++.+ .+..+++|++|++++|.++. +|. +..+++|++|+|++|++++..+ +..+++|++|+|++|+
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~~--~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IEG--VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-chh--hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 344455554432 23445556666666665552 332 3555555555555555554322 5555555555555555
Q ss_pred cccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChh
Q 002094 178 LSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDS 257 (967)
Q Consensus 178 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 257 (967)
+++. + .+..+++|++|+|++|.+++.. .+..+++|++|++++|.+++..+
T Consensus 97 l~~~-~-~~~~l~~L~~L~l~~n~l~~~~--------------------------~l~~l~~L~~L~l~~n~l~~~~~-- 146 (308)
T 1h6u_A 97 LKNV-S-AIAGLQSIKTLDLTSTQITDVT--------------------------PLAGLSNLQVLYLDLNQITNISP-- 146 (308)
T ss_dssp CSCC-G-GGTTCTTCCEEECTTSCCCCCG--------------------------GGTTCTTCCEEECCSSCCCCCGG--
T ss_pred CCCc-h-hhcCCCCCCEEECCCCCCCCch--------------------------hhcCCCCCCEEECCCCccCcCcc--
Confidence 5532 1 3444555555555555544322 14444555555555555543222
Q ss_pred hhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCc
Q 002094 258 LQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLL 337 (967)
Q Consensus 258 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 337 (967)
+..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++.. .+..+++|+
T Consensus 147 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~ 220 (308)
T 1h6u_A 147 LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLF 220 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCC
T ss_pred ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCC
Confidence 5555555555555555554322 5555666666666666654322 555666666666666666443 256666666
Q ss_pred EEEccCCcCc
Q 002094 338 AIDVSQNKLT 347 (967)
Q Consensus 338 ~L~l~~N~l~ 347 (967)
.|++++|+++
T Consensus 221 ~L~l~~N~i~ 230 (308)
T 1h6u_A 221 IVTLTNQTIT 230 (308)
T ss_dssp EEEEEEEEEE
T ss_pred EEEccCCeee
Confidence 6666666665
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4.2e-22 Score=216.84 Aligned_cols=207 Identities=18% Similarity=0.268 Sum_probs=159.1
Q ss_pred eecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEecccccc
Q 002094 75 TLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNL 154 (967)
Q Consensus 75 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l 154 (967)
.+....+++.+ .+.++++|++|++++|+++.. + .+..+++|++|+|++|.+++ ++. +..+++|++|+|++|++
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCC
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcC
Confidence 34444444432 345788999999999999864 4 68999999999999999985 444 78999999999999999
Q ss_pred CCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCc
Q 002094 155 TGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDI 234 (967)
Q Consensus 155 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 234 (967)
++. ..+..+++|++|+|++|++++. + .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++..+ +
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h
Confidence 864 3689999999999999999864 3 38899999999999999987654 7788888888888888875433 7
Q ss_pred cCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccccc
Q 002094 235 GGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSG 300 (967)
Q Consensus 235 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 300 (967)
..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 777778888887777775433 6677777777777777765442 6666777777777777663
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.6e-22 Score=221.85 Aligned_cols=240 Identities=18% Similarity=0.126 Sum_probs=166.8
Q ss_pred CeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCc-cccccccccce-eee
Q 002094 96 QVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIP-ESLSFCSSLES-VNF 173 (967)
Q Consensus 96 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~-L~L 173 (967)
++++.++++++ .+|..+ .+++++|+|++|+|+ .||...|+++++|++|+|++|++.+.+| ..|.++++|+. +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 45677788887 456555 367888888888887 6777778888888888888888866554 46778887765 566
Q ss_pred cccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccC-ccccccCCcCccCCC-CccEEeccccccC
Q 002094 174 SSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGK-NKFSGQLPEDIGGCS-MLKVLDFGVNSLS 251 (967)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~l~~n~l~ 251 (967)
++|+|+...|..|..+++|++|++++|.+++..+..+....++..|++.+ |++....+..|..+. .+++|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 67888877778888888888888888888877777777777777888755 566655556676664 5777888888887
Q ss_pred CCCChhhhcCCCCCEEEccC-CCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhh
Q 002094 252 GSLPDSLQRLNSCSSLSLKG-NSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESM 330 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 330 (967)
.. |.......+|+.|++.+ |.++.+.++.|.++++|++|+|++|+|+...+..+.++++|+.+++ +.++ .+| .+
T Consensus 168 ~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l 242 (350)
T 4ay9_X 168 EI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TL 242 (350)
T ss_dssp EE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CT
T ss_pred CC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cc
Confidence 43 33333456677777764 5666555566777888888888888887544444444444444333 2233 444 36
Q ss_pred hcCCCCcEEEccCC
Q 002094 331 MNCGNLLAIDVSQN 344 (967)
Q Consensus 331 ~~l~~L~~L~l~~N 344 (967)
.++++|+.++++++
T Consensus 243 ~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 243 EKLVALMEASLTYP 256 (350)
T ss_dssp TTCCSCCEEECSCH
T ss_pred hhCcChhhCcCCCC
Confidence 67777777777644
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=6.9e-21 Score=194.73 Aligned_cols=163 Identities=21% Similarity=0.190 Sum_probs=100.4
Q ss_pred CCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeec
Q 002094 142 GSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKL 221 (967)
Q Consensus 142 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 221 (967)
++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 34555555555555444444555555555555555555444444555555666666666555555555556666666666
Q ss_pred cCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccc
Q 002094 222 GKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGR 301 (967)
Q Consensus 222 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 301 (967)
++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|.+.+ .+++|++|+++.|+++|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCce
Confidence 6666665555556666667777777777665555556677777777777776653 345677888888888888
Q ss_pred cCCCCCcccc
Q 002094 302 IPSSIGNLVF 311 (967)
Q Consensus 302 ~~~~~~~l~~ 311 (967)
+|..++.++.
T Consensus 181 ip~~~~~l~~ 190 (208)
T 2o6s_A 181 VRNSAGSVAP 190 (208)
T ss_dssp BBCTTSSBCT
T ss_pred eeccCccccC
Confidence 8877776654
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.1e-21 Score=209.92 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=117.0
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCcc-----------------ccHHHHHHHHHHHcCCCCCceeee
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLI-----------------KSQEDFEKEMKTLGKIRHHNLVAL 744 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-----------------~~~~~~~~E~~~l~~l~h~niv~~ 744 (967)
..|...+.||+|+||.||+|...+|+.||||.++..... .....+.+|++++++++ | +++
T Consensus 90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 345566899999999999999977999999999643311 13467899999999998 4 666
Q ss_pred eeEEEcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCCCCeEEe
Q 002094 745 EGYYWTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVG 824 (967)
Q Consensus 745 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~ 824 (967)
.+++.. +..++||||++|++|.+ +.. .....++.|++.||+|||++||+||||||+||+++ ++.+||+
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEE
Confidence 665543 56699999999999998 421 12446999999999999999999999999999999 9999999
Q ss_pred ecccccccCCCccccccccccccccccCcccc
Q 002094 825 DFGLARLLPMLDRCILSSKIQSALGYMAPEFA 856 (967)
Q Consensus 825 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 856 (967)
|||+++.. ..+.|||++
T Consensus 235 DFG~a~~~---------------~~~~a~e~l 251 (282)
T 1zar_A 235 DFPQSVEV---------------GEEGWREIL 251 (282)
T ss_dssp CCTTCEET---------------TSTTHHHHH
T ss_pred ECCCCeEC---------------CCCCHHHHH
Confidence 99998733 236788876
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.1e-20 Score=220.53 Aligned_cols=188 Identities=26% Similarity=0.336 Sum_probs=107.6
Q ss_pred CCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeee
Q 002094 94 FLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNF 173 (967)
Q Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 173 (967)
+|+.|+|++|++++ +|..+ +++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 66666666666665 44444 256666666666666 455 234566666666666664 444 433 5666666
Q ss_pred cccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCC
Q 002094 174 SSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGS 253 (967)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 253 (967)
++|+|++ +|. .+++|++|+|++|.|++ +|. .+++|++|+|++|+|++
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-------------------------lp~---~l~~L~~L~Ls~N~L~~- 174 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-------------------------LPE---LPTSLEVLSVRNNQLTF- 174 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-------------------------CCC---CCTTCCEEECCSSCCSC-
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-------------------------CCC---cCCCcCEEECCCCCCCC-
Confidence 6666654 333 34555555555555554 222 23444455555555443
Q ss_pred CChhhhcCCCCCEEEccCCCCCCcCchhhcccccc-------ccccccccccccccCCCCCcccccceEEcccCcCCCCC
Q 002094 254 LPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANL-------ESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGL 326 (967)
Q Consensus 254 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 326 (967)
+|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+
T Consensus 175 lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 175 LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 333 33 45555555555555 3333 332 44 77777777777 46666777778888888888887777
Q ss_pred ChhhhcCC
Q 002094 327 PESMMNCG 334 (967)
Q Consensus 327 ~~~~~~l~ 334 (967)
|..+..++
T Consensus 247 p~~l~~l~ 254 (571)
T 3cvr_A 247 RESLSQQT 254 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 77776654
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=6.9e-21 Score=196.15 Aligned_cols=178 Identities=22% Similarity=0.280 Sum_probs=145.7
Q ss_pred cEEEccCCcccCCCCCCcccccccchhcccccccccccC-CCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCC
Q 002094 389 QVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIP-ASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEK 467 (967)
Q Consensus 389 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 467 (967)
+.+++++|.++. +|..+. ..+++|+|++|++.+..+ ..|..+++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 478888888875 455443 346789999999887754 4588999999999999999988888899999999999999
Q ss_pred CCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 468 NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 468 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998889999999999999999999999989999999999999999999998887
Q ss_pred CCCCCCccCCCc-ccCCCCCCCcc
Q 002094 548 VGGFFNTISPSS-VSGNPSLCGSV 570 (967)
Q Consensus 548 ~~~~~~~~~~~~-~~~n~~lc~~~ 570 (967)
...+..++.... +.+|+ .|..|
T Consensus 171 l~~l~~~~~~~~~~~~~~-~C~~P 193 (220)
T 2v70_A 171 LAWLGEWLRKKRIVTGNP-RCQKP 193 (220)
T ss_dssp GHHHHHHHHHSCCBCCCC-EEEES
T ss_pred hHHHHHHHHhcCccccCC-ccCCC
Confidence 544433332222 23443 46544
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.4e-20 Score=193.91 Aligned_cols=158 Identities=22% Similarity=0.290 Sum_probs=136.4
Q ss_pred cEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCC
Q 002094 389 QVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKN 468 (967)
Q Consensus 389 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 468 (967)
+.+++++|.++. +|..+. ++|+.|+|++|++.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 567788888774 444443 67888999999988777778899999999999999999888889999999999999999
Q ss_pred CCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCC
Q 002094 469 FLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPV 548 (967)
Q Consensus 469 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 548 (967)
+|+...+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|.+....
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99977777788999999999999999988899999999999999999999988888899999999999999999876654
Q ss_pred C
Q 002094 549 G 549 (967)
Q Consensus 549 ~ 549 (967)
.
T Consensus 171 ~ 171 (220)
T 2v9t_B 171 K 171 (220)
T ss_dssp H
T ss_pred H
Confidence 3
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=6.3e-20 Score=190.30 Aligned_cols=158 Identities=24% Similarity=0.284 Sum_probs=128.3
Q ss_pred CCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCC
Q 002094 54 DNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLI 133 (967)
Q Consensus 54 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~i 133 (967)
.+.|.|.+|.|+.. ++ +.+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+++ .+
T Consensus 16 ~~~Cs~~~v~c~~~--~l-----------~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i 79 (229)
T 3e6j_A 16 QCSCSGTTVDCRSK--RH-----------ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-AL 79 (229)
T ss_dssp TCEEETTEEECTTS--CC-----------SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCEEeCCEeEccCC--Cc-----------CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-Cc
Confidence 45799999999743 11 12344333 78999999999999988999999999999999999996 67
Q ss_pred CchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCC
Q 002094 134 PDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNL 213 (967)
Q Consensus 134 p~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 213 (967)
|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 7777888999999999999999877777888999999999999988 678888888888888888888887766677777
Q ss_pred CCCCeeeccCccccc
Q 002094 214 YDLRAIKLGKNKFSG 228 (967)
Q Consensus 214 ~~L~~L~L~~n~l~~ 228 (967)
++|+.|+|++|.+..
T Consensus 159 ~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTCCEEECTTSCBCT
T ss_pred CCCCEEEeeCCCccC
Confidence 777777777777664
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=1.5e-21 Score=236.53 Aligned_cols=218 Identities=18% Similarity=0.167 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHhcCCC-CccccCCCCCCCCCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCc
Q 002094 26 NDDVLGLIVFKAGLED-PKEKLTSWSEDDDNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNN 104 (967)
Q Consensus 26 ~~d~~all~~k~~~~~-~~~~l~sw~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~ 104 (967)
..|+++|+++..+... .+..-.+|.......+.|.+++++ +.+++.|+|.++++... +..+ |+.++|++|.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~~~ 202 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDEA-NQAL-----LQHKKLSQYS 202 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCcc-hhhH-----hhcCccCccc
Confidence 4688999999988742 233445686555556789999986 47899999988887763 3332 3444455554
Q ss_pred cCc---------cccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecc
Q 002094 105 FTG---------TINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSS 175 (967)
Q Consensus 105 l~~---------~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 175 (967)
|.+ ..+..+..++.|+.|+|++|.+. .+|..+| .+++|++|+|++|+|+ .+|..|+.|++|++|+|++
T Consensus 203 i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 203 IDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp -------------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTT
T ss_pred ccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcC
Confidence 443 34566666667777777777666 5665554 5666677777766666 5666666666666666666
Q ss_pred cccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCC-ccEEeccccccCCCC
Q 002094 176 NRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSM-LKVLDFGVNSLSGSL 254 (967)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~ 254 (967)
|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+++++|++|+|++|++++.+|..+..+.. +..|+|++|.+++.+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~ 357 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPL 357 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcC
Confidence 6666 55666666666666666666665 34555666666666666666666666555544321 223555666665555
Q ss_pred Ch
Q 002094 255 PD 256 (967)
Q Consensus 255 ~~ 256 (967)
|.
T Consensus 358 p~ 359 (727)
T 4b8c_D 358 PH 359 (727)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=5.4e-20 Score=198.27 Aligned_cols=171 Identities=21% Similarity=0.309 Sum_probs=98.7
Q ss_pred CCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCe
Q 002094 115 SFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQS 194 (967)
Q Consensus 115 ~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (967)
.+++|+.|++++|.+++ ++. +..+++|++|+|++|++++..+ ++.+++|++|+|++|++++ +| .+..+++|++
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hcCcccEEEccCCCccc-Chh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 34444445555444442 222 3445555555555555554322 5555555555555555543 22 2555555555
Q ss_pred EeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCC
Q 002094 195 LDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSF 274 (967)
Q Consensus 195 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 274 (967)
|+|++|.+++. ..+..+++|+.|++++|++++. ..++.+++|++|++++|++++..+ +..+++|+.|+|++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 55555555543 3455566666666666666543 456666677777777777765433 66777777777777777
Q ss_pred CCcCchhhcccccccccccccccccc
Q 002094 275 TGEVPDWIGKLANLESLDLSLNQFSG 300 (967)
Q Consensus 275 ~~~~~~~l~~l~~L~~L~L~~N~l~~ 300 (967)
++. + .+..+++|+.|++++|++..
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccC
Confidence 743 3 36777778888888877764
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=9.7e-20 Score=203.04 Aligned_cols=162 Identities=25% Similarity=0.205 Sum_probs=139.0
Q ss_pred CCccEEEccCCcccCCCCCCcc-cccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEE
Q 002094 386 QGLQVLDLSSNALSGVIPSNIG-DLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELK 464 (967)
Q Consensus 386 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 464 (967)
..++.|+|++|+|++..+..+. ++++|+.|+|++|+|.+..+..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4578899999999888888887 899999999999999888888899999999999999999887777889999999999
Q ss_pred cCCCCCCCcCCccccccCccceeeccCCcCcCccchhh---hcccCccEEeccCCccccCCchhhhhccCC--ceEEecC
Q 002094 465 LEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAI---ANLSNLKYVDLSFNDLSGILPKELINLSHL--LSFNISH 539 (967)
Q Consensus 465 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~l~~ 539 (967)
|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++..+..+..++.+ +.|+|++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 99999998888899999999999999999997655556 678999999999999998777888888874 7888888
Q ss_pred CcccccCC
Q 002094 540 NHLHGELP 547 (967)
Q Consensus 540 N~l~~~~p 547 (967)
|+|.+...
T Consensus 199 N~~~C~C~ 206 (361)
T 2xot_A 199 NPLECDCK 206 (361)
T ss_dssp SCEECCHH
T ss_pred CCccCCcC
Confidence 88886543
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=7.6e-20 Score=197.11 Aligned_cols=172 Identities=22% Similarity=0.329 Sum_probs=97.0
Q ss_pred hcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCe
Q 002094 139 RQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRA 218 (967)
Q Consensus 139 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 218 (967)
..+++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++. ..+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCE
Confidence 4455566666666665533 2 35556666666666666654333 55566666666666665542 23555666666
Q ss_pred eeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccc
Q 002094 219 IKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQF 298 (967)
Q Consensus 219 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 298 (967)
|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..+ +..+++|++|++++|++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 66666665542 3455556666666666666543 455556666666666666654433 55566666666666666
Q ss_pred ccccCCCCCcccccceEEcccCcCCC
Q 002094 299 SGRIPSSIGNLVFLKELNISMNQFTG 324 (967)
Q Consensus 299 ~~~~~~~~~~l~~L~~L~L~~N~l~~ 324 (967)
++. + .+..+++|+.|++++|+++.
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccC
Confidence 532 2 25556666666666666553
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=4.2e-20 Score=218.12 Aligned_cols=106 Identities=25% Similarity=0.333 Sum_probs=53.1
Q ss_pred ccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccc
Q 002094 234 IGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLK 313 (967)
Q Consensus 234 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 313 (967)
+..+++|++|+|++|++.+. ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.+..| +..+++|+
T Consensus 105 l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 178 (605)
T 1m9s_A 105 LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 178 (605)
T ss_dssp STTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCC
Confidence 44444444444444444421 2344445555555555555433 344555555555555555554433 55555555
Q ss_pred eEEcccCcCCCCCChhhhcCCCCcEEEccCCcCc
Q 002094 314 ELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLT 347 (967)
Q Consensus 314 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 347 (967)
.|+|++|+|++. ..+..+++|+.|+|++|++.
T Consensus 179 ~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 179 NLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp EEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred EEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 555555555542 23555555566666655555
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=8.6e-20 Score=215.48 Aligned_cols=171 Identities=21% Similarity=0.308 Sum_probs=80.2
Q ss_pred CCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCe
Q 002094 115 SFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQS 194 (967)
Q Consensus 115 ~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (967)
.+++|+.|+|++|.++ .+|. +..+++|++|+|++|++++..| +..+++|++|+|++|+|++ +| .+..+++|+.
T Consensus 41 ~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred cCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 3444444444444443 2221 3444444444444444443322 4444444444444444442 11 3444444444
Q ss_pred EeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCC
Q 002094 195 LDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSF 274 (967)
Q Consensus 195 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 274 (967)
|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|.|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 55544444432 2344444455555555544432 344455555555555555554333 55555555555555555
Q ss_pred CCcCchhhcccccccccccccccccc
Q 002094 275 TGEVPDWIGKLANLESLDLSLNQFSG 300 (967)
Q Consensus 275 ~~~~~~~l~~l~~L~~L~L~~N~l~~ 300 (967)
++. ..+..+++|+.|+|++|++.+
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCC--hHHccCCCCCEEEccCCcCcC
Confidence 532 235555555555555555553
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=2e-19 Score=200.49 Aligned_cols=156 Identities=22% Similarity=0.124 Sum_probs=76.0
Q ss_pred CceEeccccccCCCCccccc-cccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeecc
Q 002094 144 LREVSFANNNLTGPIPESLS-FCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLG 222 (967)
Q Consensus 144 L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 222 (967)
+++|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 34444444444433333343 44444444444444444444444444444444444444444444444445555555555
Q ss_pred CccccccCCcCccCCCCccEEeccccccCCCCChhh---hcCCCCCEEEccCCCCCCcCchhhccccc--cccccccccc
Q 002094 223 KNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSL---QRLNSCSSLSLKGNSFTGEVPDWIGKLAN--LESLDLSLNQ 297 (967)
Q Consensus 223 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l---~~l~~L~~L~L~~n~l~~~~~~~l~~l~~--L~~L~L~~N~ 297 (967)
+|+|++..+..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 555554445555555555555555555554333333 34556666666666666554455555554 2555555555
Q ss_pred cc
Q 002094 298 FS 299 (967)
Q Consensus 298 l~ 299 (967)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.3e-19 Score=184.77 Aligned_cols=113 Identities=23% Similarity=0.265 Sum_probs=44.7
Q ss_pred hhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCC
Q 002094 138 FRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLR 217 (967)
Q Consensus 138 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 217 (967)
|..+++|++|+|++|+|++..+..|+++++|++|+|++|+|++..+..|..+++|++|+|++|.+++..+..|.++++|+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 33444444444444444433333344444444444444444433333333444444444444444433333333333333
Q ss_pred eeeccCccccccCCcCccCCCCccEEecccccc
Q 002094 218 AIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSL 250 (967)
Q Consensus 218 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 250 (967)
+|+|++|++++..|..|..+++|++|++++|.+
T Consensus 133 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 133 LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 333333333333333333333333333333333
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.4e-21 Score=229.39 Aligned_cols=217 Identities=20% Similarity=0.142 Sum_probs=127.4
Q ss_pred cCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccc
Q 002094 90 LRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLE 169 (967)
Q Consensus 90 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 169 (967)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|.....+|. .+..+++.+.+|..++.+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~------------ll~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL------------LMRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH------------HHHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH------------HHHhcccccCCHHHHHHHHhcc
Confidence 45666666666666665 5566666666666666654431100000 0111224556677777777777
Q ss_pred eee-ecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEecccc
Q 002094 170 SVN-FSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVN 248 (967)
Q Consensus 170 ~L~-L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 248 (967)
.|+ ++.|++. +|+.+.+++|.++...+. .|+.|+|++|++++ +|. |+.+++|++|+|++|
T Consensus 413 ~L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 413 AVDPMRAAYLD-----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HHCGGGHHHHH-----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cCcchhhcccc-----------hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 777 6665443 344445555554432221 35666666666664 344 666666666666666
Q ss_pred ccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccccccc-CCCCCcccccceEEcccCcCCCCCC
Q 002094 249 SLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRI-PSSIGNLVFLKELNISMNQFTGGLP 327 (967)
Q Consensus 249 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~ 327 (967)
+|+ .+|..|.++++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.. |..++.+++|+.|+|++|++++.+|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 666 556666666666666666666664 34 5666666666666666666554 6666666667777777776665543
Q ss_pred h---hhhcCCCCcEEEc
Q 002094 328 E---SMMNCGNLLAIDV 341 (967)
Q Consensus 328 ~---~~~~l~~L~~L~l 341 (967)
. .+..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 2 2344677777754
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=7.1e-19 Score=182.36 Aligned_cols=156 Identities=22% Similarity=0.213 Sum_probs=125.6
Q ss_pred ccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCC
Q 002094 388 LQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEK 467 (967)
Q Consensus 388 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 467 (967)
-+.+++++++++. +|..+. ++|++|+|++|.+.+..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 4567777777763 344333 6788888888888877788888888888888888888765556678888888888888
Q ss_pred CCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 468 NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 468 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.+.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888777777888888888888888888 678888888888889999888887777788888888888888888887665
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.2e-21 Score=230.00 Aligned_cols=90 Identities=24% Similarity=0.358 Sum_probs=43.7
Q ss_pred cCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCcc-chhhhcccCc
Q 002094 430 IGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPV-PAAIANLSNL 508 (967)
Q Consensus 430 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L 508 (967)
++.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..|+.+++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 444444444444444444 344444444445555555555443 33 4455555555555555555443 4555555555
Q ss_pred cEEeccCCccccCC
Q 002094 509 KYVDLSFNDLSGIL 522 (967)
Q Consensus 509 ~~L~Ls~N~l~~~~ 522 (967)
+.|+|++|++++.+
T Consensus 536 ~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 536 VLLNLQGNSLCQEE 549 (567)
T ss_dssp CEEECTTSGGGGSS
T ss_pred CEEEecCCcCCCCc
Confidence 55555555555443
No 368
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=6.3e-19 Score=181.45 Aligned_cols=134 Identities=22% Similarity=0.268 Sum_probs=81.5
Q ss_pred CCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeec
Q 002094 142 GSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKL 221 (967)
Q Consensus 142 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 221 (967)
++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45555666666665555555666666666666666666555666666666666666666666555555566666666666
Q ss_pred cCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCC
Q 002094 222 GKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFT 275 (967)
Q Consensus 222 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 275 (967)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666555566666666666666666666555555666666666666666654
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=4.3e-19 Score=188.07 Aligned_cols=168 Identities=22% Similarity=0.268 Sum_probs=86.6
Q ss_pred CCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcccccccccccee
Q 002094 92 LQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESV 171 (967)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 171 (967)
+..+..+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ ++.+++|++|
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 444555666666666432 4556666666666666665 344 24566666666666666664433 6666666666
Q ss_pred eecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccC
Q 002094 172 NFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS 251 (967)
Q Consensus 172 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 251 (967)
+|++|++++. |.. .. ++|++|+|++|.+++. ..+..+++|+.|+|++|++++. + .++.+++|++|++++|+++
T Consensus 91 ~L~~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Ccc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 6666666532 221 12 5555555555555542 2344555555555555554432 1 3444444444444444444
Q ss_pred CCCChhhhcCCCCCEEEccCCCCC
Q 002094 252 GSLPDSLQRLNSCSSLSLKGNSFT 275 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~n~l~ 275 (967)
+. ..+..+++|+.|++++|.++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 32 33444444444444444443
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=5.8e-19 Score=213.91 Aligned_cols=222 Identities=20% Similarity=0.218 Sum_probs=109.5
Q ss_pred CCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceee
Q 002094 93 QFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVN 172 (967)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 172 (967)
++++.|+|++|.+... +. ..|+.++|+.|.|++ +++..|++. ..|..+..+++|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i~~---------------~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSIDE---------------DDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCcc-hh-----hHhhcCccCcccccC---------------cccccccee-cChhhhccCCCCcEEE
Confidence 5688889998888753 22 345666677766653 234455555 5566777777777777
Q ss_pred ecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCC
Q 002094 173 FSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSG 252 (967)
Q Consensus 173 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 252 (967)
|++|++. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..|+++++|++|+|++|.|+
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~- 306 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT- 306 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-
Confidence 7777777 56666667777888888888777 56677778888888888888887 66888888888888888888887
Q ss_pred CCChhhhcCCCCCEEEccCCCCCCcCchhhccccc-cccccccccccccccCCCCCcccccceEEcccC--------cCC
Q 002094 253 SLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLAN-LESLDLSLNQFSGRIPSSIGNLVFLKELNISMN--------QFT 323 (967)
Q Consensus 253 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~ 323 (967)
.+|..|.++++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++++| .+.
T Consensus 307 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~ 380 (727)
T 4b8c_D 307 TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQ 380 (727)
T ss_dssp CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------------------
T ss_pred ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCcc
Confidence 66777888888888999999988888888766533 335789999998887754 456666666 233
Q ss_pred CCCChhhhcCCCCcEEEccCCcC
Q 002094 324 GGLPESMMNCGNLLAIDVSQNKL 346 (967)
Q Consensus 324 ~~~~~~~~~l~~L~~L~l~~N~l 346 (967)
+..+..+.++..+....+++|-+
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil 403 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTL 403 (727)
T ss_dssp ---------------------CC
T ss_pred ccccchhhcccccceeeeecccc
Confidence 33333344444444555555544
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=8.9e-19 Score=176.21 Aligned_cols=113 Identities=25% Similarity=0.327 Sum_probs=55.3
Q ss_pred cccEEEecCCcccccCcc-cccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEec
Q 002094 435 AIQVLDFSDNWLNGTIPP-QIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDL 513 (967)
Q Consensus 435 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 513 (967)
+|++|+|++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 344444444444433322 2444444555555555554444444555555555555555555444444555555555555
Q ss_pred cCCccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 514 SFNDLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 514 s~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
++|+|++..|..|..+++|+.|+|++|+|+|.++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 5555555555555555555555555555555444
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=5.3e-18 Score=171.47 Aligned_cols=153 Identities=16% Similarity=0.224 Sum_probs=129.7
Q ss_pred CCCCccEEEccCCcccCCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEE
Q 002094 384 SYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKEL 463 (967)
Q Consensus 384 ~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 463 (967)
.+++|+.|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|++++..+..+..+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 4567899999999998 444 6888999999999999764 34578889999999999999998788899999999999
Q ss_pred EcCCCCCCCcCCccccccCccceeeccCCc-CcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcc
Q 002094 464 KLEKNFLSGRIPSQIKNCSSLTSLILSQNN-LTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHL 542 (967)
Q Consensus 464 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 542 (967)
+|++|++++..|..++.+++|+.|+|++|+ ++ .+| .+..+++|++|++++|++++. + .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 999999998888899999999999999998 65 455 689999999999999999864 3 788999999999999998
Q ss_pred cc
Q 002094 543 HG 544 (967)
Q Consensus 543 ~~ 544 (967)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 64
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.2e-18 Score=182.57 Aligned_cols=168 Identities=21% Similarity=0.315 Sum_probs=87.6
Q ss_pred CCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeee
Q 002094 141 CGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIK 220 (967)
Q Consensus 141 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 220 (967)
+.++..+++++|.+++.. .+..+++|++|++++|+++ .+| .+..+++|++|+|++|.+++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344555555555555322 3555555555666555555 233 45555556666666665554433 55555555555
Q ss_pred ccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhcccccccccccccccccc
Q 002094 221 LGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSG 300 (967)
Q Consensus 221 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 300 (967)
|++|++++. +. +.. ++|++|++++|++++. ..+..+++|+.|+|++|++++. + .+..+++|++|+|++|++++
T Consensus 92 L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 555555532 22 112 5555666666655532 2355555555555555555543 2 35555555555555555554
Q ss_pred ccCCCCCcccccceEEcccCcCC
Q 002094 301 RIPSSIGNLVFLKELNISMNQFT 323 (967)
Q Consensus 301 ~~~~~~~~l~~L~~L~L~~N~l~ 323 (967)
. ..+..+++|+.|++++|.++
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEE
T ss_pred h--HHhccCCCCCEEeCCCCccc
Confidence 3 34445555555555555544
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=7.9e-18 Score=170.18 Aligned_cols=154 Identities=18% Similarity=0.285 Sum_probs=94.9
Q ss_pred cccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCcc
Q 002094 162 LSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLK 241 (967)
Q Consensus 162 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 241 (967)
.+.+++|++|++++|+++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677777777777776 444 56667777777777775542 23566666677777777776665666666666677
Q ss_pred EEeccccccCCCCChhhhcCCCCCEEEccCCC-CCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccC
Q 002094 242 VLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNS-FTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMN 320 (967)
Q Consensus 242 ~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (967)
+|++++|++++..|..+..+++|++|+|++|. ++ .++ .+..+++|++|++++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 76666666665556666666666666666665 44 233 45566666666666666653 22 4555555666666555
Q ss_pred cCC
Q 002094 321 QFT 323 (967)
Q Consensus 321 ~l~ 323 (967)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 554
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.8e-17 Score=166.54 Aligned_cols=132 Identities=23% Similarity=0.278 Sum_probs=110.3
Q ss_pred cEEEccCCcccCCCCCCcccccccchhcccccccccccCC-CcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCC
Q 002094 389 QVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFGSIPA-SIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEK 467 (967)
Q Consensus 389 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 467 (967)
+.+++++|+++ .+|..+.. +|++|++++|++.+..+. .|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57778888776 44544433 788888888888766654 488888999999999999888888899999999999999
Q ss_pred CCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCc
Q 002094 468 NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILP 523 (967)
Q Consensus 468 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 523 (967)
|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999998889999999999999999999987665
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=5.6e-18 Score=178.92 Aligned_cols=138 Identities=20% Similarity=0.197 Sum_probs=106.5
Q ss_pred ccCCCCccCCCCceEEEEEEe-CCCcE--EEEEEeecCCcc-----------------------ccHHHHHHHHHHHcCC
Q 002094 683 LLNKDCELGRGGFGVVYRTIL-QDGRS--VAIKKLTVSGLI-----------------------KSQEDFEKEMKTLGKI 736 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~l~~~~~~-----------------------~~~~~~~~E~~~l~~l 736 (967)
.|...+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356678899999999999997 67989 999987543211 0123688999999999
Q ss_pred CCCce--eeeeeEEEcCCceeEEEEecCC-C----chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCcccCCC
Q 002094 737 RHHNL--VALEGYYWTPSLQLLIYEFISS-G----SLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLH-HTNIIHYNL 808 (967)
Q Consensus 737 ~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH-~~~ivH~Di 808 (967)
.|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.|++||| +.||+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence 87754 333332 356899999942 4 66665432 224457789999999999999 999999999
Q ss_pred CCCCEEeCCCCCeEEeeccccccc
Q 002094 809 KSTNVLIDSSGEPKVGDFGLARLL 832 (967)
Q Consensus 809 k~~Nill~~~~~~kl~Dfg~a~~~ 832 (967)
||+|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999988 9999999999754
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=7.9e-18 Score=185.11 Aligned_cols=291 Identities=12% Similarity=0.070 Sum_probs=143.6
Q ss_pred ccccceeeecccccccccCccccc-cccCCeEeecCCcCC--CcccccccCCCCCCeeeccCccccccCCcCccC-----
Q 002094 165 CSSLESVNFSSNRLSGQLPYGIWF-LRSLQSLDLSNNLLE--GEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGG----- 236 (967)
Q Consensus 165 l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----- 236 (967)
+.+++.|.++++ +....-..+.. +++|+.|||++|++. ..... .++.++.+.+..|.+ .+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhccccccc
Confidence 667888888764 22121123333 667777777777776 22211 122234444444422 2334444
Q ss_pred ---CCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccc
Q 002094 237 ---CSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLK 313 (967)
Q Consensus 237 ---l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 313 (967)
+++|+.|++.. +++...+.+|.++++|+.|++.+|.+..+.+.+|.++.++..+.+..+...
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~-------------- 161 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY-------------- 161 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH--------------
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh--------------
Confidence 55555555555 555444445555555555555555555444444544444444433332110
Q ss_pred eEEcccCcCCCCCChhhhcCCCCc-EEEccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEE
Q 002094 314 ELNISMNQFTGGLPESMMNCGNLL-AIDVSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLD 392 (967)
Q Consensus 314 ~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~ 392 (967)
.........+|.++.+|+ .+++... +.++..++... -...+++.+.
T Consensus 162 ------~~~~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~------------------------~~~~~~~~l~ 208 (329)
T 3sb4_A 162 ------RFKNRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKAG------------------------LQPRDINFLT 208 (329)
T ss_dssp ------HTSTTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHTT------------------------CCGGGCSEEE
T ss_pred ------hccccccccccccccccceeEEecCC---CcHHHHHhhcc------------------------cCccccceEE
Confidence 011112233444555555 3444322 12233222110 0012223333
Q ss_pred ccCCcccCCCCCCc-ccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCC-EEEcCCCCC
Q 002094 393 LSSNALSGVIPSNI-GDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLK-ELKLEKNFL 470 (967)
Q Consensus 393 L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l 470 (967)
+.++-.. .....+ ..+++|+.|+|++|.+....+..|.++.+|+.|+|++| ++...+..|.++.+|+ .+++.+ .+
T Consensus 209 ~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l 285 (329)
T 3sb4_A 209 IEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SV 285 (329)
T ss_dssp EEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TC
T ss_pred EeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cc
Confidence 3322110 000001 11345555555555555444455666666666666665 5545555666666666 666666 55
Q ss_pred CCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEec
Q 002094 471 SGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDL 513 (967)
Q Consensus 471 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 513 (967)
+...+.+|.++++|+.|+|++|+++.+.+.+|.++++|+.|+.
T Consensus 286 ~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 286 TAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred eEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 5455667777777777777777777666667777777777653
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=2.1e-17 Score=181.73 Aligned_cols=85 Identities=19% Similarity=0.124 Sum_probs=46.8
Q ss_pred CCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccc-eEEcccCcCCCCCChhhhcCCCCcEE
Q 002094 261 LNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLK-ELNISMNQFTGGLPESMMNCGNLLAI 339 (967)
Q Consensus 261 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L 339 (967)
+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| +..+.+.+|.++.+|+ .+++.+ .++.+.+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 455555555555555444555555555555555555 4444444555555555 555555 4444455555555555555
Q ss_pred EccCCcCc
Q 002094 340 DVSQNKLT 347 (967)
Q Consensus 340 ~l~~N~l~ 347 (967)
++++|+++
T Consensus 303 ~l~~n~i~ 310 (329)
T 3sb4_A 303 LATGDKIT 310 (329)
T ss_dssp EECSSCCC
T ss_pred EeCCCccC
Confidence 55555555
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2.7e-17 Score=165.19 Aligned_cols=134 Identities=24% Similarity=0.282 Sum_probs=104.0
Q ss_pred hhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCc
Q 002094 414 LLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNN 493 (967)
Q Consensus 414 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 493 (967)
.+++++|.+. .+|..+. ++|+.|+|++|+++ .+|..|..+++|++|+|++|.|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3444444443 3343332 46777888888876 567778888888888888888887777888888889999999999
Q ss_pred CcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccCCCCCC
Q 002094 494 LTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGF 551 (967)
Q Consensus 494 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 551 (967)
|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|.+......+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l 147 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWL 147 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHH
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHH
Confidence 9888888888899999999999999877777888899999999999999876654433
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.3e-16 Score=155.01 Aligned_cols=130 Identities=19% Similarity=0.166 Sum_probs=69.9
Q ss_pred cchhcccccccc-cccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeecc
Q 002094 412 LMLLNMSMNYLF-GSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILS 490 (967)
Q Consensus 412 L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 490 (967)
|+.|++++|.+. +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+|+
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 444444444443 33444444445555555555555433 445555555555555555554455555556666666666
Q ss_pred CCcCcCcc-chhhhcccCccEEeccCCccccCCc---hhhhhccCCceEEecCCccc
Q 002094 491 QNNLTGPV-PAAIANLSNLKYVDLSFNDLSGILP---KELINLSHLLSFNISHNHLH 543 (967)
Q Consensus 491 ~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~l~~N~l~ 543 (967)
+|++++.. +..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66665432 1455666666666666666664444 35556666666666666554
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.9e-16 Score=154.27 Aligned_cols=135 Identities=21% Similarity=0.191 Sum_probs=122.1
Q ss_pred CCCccEEEccCCccc-CCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEE
Q 002094 385 YQGLQVLDLSSNALS-GVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKEL 463 (967)
Q Consensus 385 ~~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 463 (967)
.++|++|++++|+++ +.+|..+..+++|++|++++|.+.+. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999998 77888899999999999999999865 889999999999999999998788888889999999
Q ss_pred EcCCCCCCCcC-CccccccCccceeeccCCcCcCccc---hhhhcccCccEEeccCCccccC
Q 002094 464 KLEKNFLSGRI-PSQIKNCSSLTSLILSQNNLTGPVP---AAIANLSNLKYVDLSFNDLSGI 521 (967)
Q Consensus 464 ~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~ 521 (967)
+|++|.+++.. +..+..+++|+.|+|++|++++..+ ..|..+++|++||+++|.+...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 99999999643 3789999999999999999997665 5899999999999999998843
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=6.7e-16 Score=153.06 Aligned_cols=136 Identities=18% Similarity=0.255 Sum_probs=95.2
Q ss_pred CCCCccceEEeCCCCCeeeeeeecCCCCCccccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCC
Q 002094 54 DNPCNWVGVKCDPKTKRVVGLTLDGFSLSGHIGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLI 133 (967)
Q Consensus 54 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~i 133 (967)
.|.|.|++|.|+.. +++ . +|..+ .++|++|++++|++++..+..|..+++|++|+|++|+++ .+
T Consensus 4 ~C~C~~~~l~~~~~--~l~----------~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~ 67 (177)
T 2o6r_A 4 RCSCSGTEIRCNSK--GLT----------S-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SL 67 (177)
T ss_dssp TCEEETTEEECCSS--CCS----------S-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CC
T ss_pred CCEeCCCEEEecCC--CCc----------c-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-Ee
Confidence 34589999999743 111 1 23222 257888888888888776677778888888888888887 45
Q ss_pred CchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCc
Q 002094 134 PDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGE 205 (967)
Q Consensus 134 p~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 205 (967)
|...|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 555567777777777777777766666677777777777777777755555556677777777777766643
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2.9e-16 Score=150.84 Aligned_cols=128 Identities=21% Similarity=0.248 Sum_probs=86.2
Q ss_pred cccchhcccccccc-cccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceee
Q 002094 410 SSLMLLNMSMNYLF-GSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLI 488 (967)
Q Consensus 410 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 488 (967)
++|+.|++++|.+. +.+|..+..+++|+.|++++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 45555556666666666666666644 5566677777777777777766666666777777777
Q ss_pred ccCCcCcCc-cchhhhcccCccEEeccCCccccCCc---hhhhhccCCceEEecC
Q 002094 489 LSQNNLTGP-VPAAIANLSNLKYVDLSFNDLSGILP---KELINLSHLLSFNISH 539 (967)
Q Consensus 489 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~l~~ 539 (967)
|++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 777777753 34677777777777777777776655 5677777777777653
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=3.8e-15 Score=167.07 Aligned_cols=265 Identities=13% Similarity=0.155 Sum_probs=209.0
Q ss_pred CCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcccccccccccee
Q 002094 92 LQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESV 171 (967)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 171 (967)
...++.+.+.+ +++.+-..+|.+. +|+.++|..| ++ .|+...|.++ +|+.+.|.+ +++.+.+.+|.+|++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 46777777765 4666667788875 7999998877 55 5777778874 699999986 7777777889999999999
Q ss_pred eecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccC
Q 002094 172 NFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLS 251 (967)
Q Consensus 172 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 251 (967)
+|++|+++......|. ..+|+.+.|.++ ++.+....|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .++++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 9999999866556665 689999999854 77788888999999999999875 56566777877 78999999 55677
Q ss_pred CCCChhhhcCCCCCEEEccCCCCC-----CcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCC
Q 002094 252 GSLPDSLQRLNSCSSLSLKGNSFT-----GEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGL 326 (967)
Q Consensus 252 ~~~~~~l~~l~~L~~L~L~~n~l~-----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 326 (967)
.....+|.++++|+.+.+.+|.+. .+.+.+|.++++|+.++|.+ .++.+...+|.++.+|+.+.|..| ++...
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 667888999999999999888775 46677899999999999984 577677778999999999999655 77677
Q ss_pred ChhhhcCCCCcEEEccCCcCcCCCChhhhc--ccccEEeccCCCCC
Q 002094 327 PESMMNCGNLLAIDVSQNKLTGNIPTWIFK--MGLQTVSLSGNRLG 370 (967)
Q Consensus 327 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--~~L~~L~L~~n~l~ 370 (967)
..+|.++ +|+.+++++|.+....+..+.. ..++.|++..+.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 8899999 9999999999887544443333 25778888777653
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.1e-15 Score=151.44 Aligned_cols=113 Identities=20% Similarity=0.214 Sum_probs=64.6
Q ss_pred cccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEecc
Q 002094 435 AIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLS 514 (967)
Q Consensus 435 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 514 (967)
+|+.|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44555555555554444445555555555555555554444455566666666666666665555555666666666666
Q ss_pred CCccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 515 FNDLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 515 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
+|++++..+..+..+++|+.|++++|+++|.+|
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 666665555455556666666666666665544
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.2e-16 Score=149.70 Aligned_cols=129 Identities=22% Similarity=0.215 Sum_probs=117.5
Q ss_pred CCCccEEEccCCccc-CCCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEE
Q 002094 385 YQGLQVLDLSSNALS-GVIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKEL 463 (967)
Q Consensus 385 ~~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 463 (967)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+.+. ..+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467999999999998 78888999999999999999999866 789999999999999999998789888889999999
Q ss_pred EcCCCCCCCc-CCccccccCccceeeccCCcCcCccc---hhhhcccCccEEeccC
Q 002094 464 KLEKNFLSGR-IPSQIKNCSSLTSLILSQNNLTGPVP---AAIANLSNLKYVDLSF 515 (967)
Q Consensus 464 ~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 515 (967)
++++|++++. .+..++.+++|+.|++++|++++..+ ..+..+++|++||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999974 45889999999999999999997766 5899999999999974
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.5e-15 Score=152.46 Aligned_cols=84 Identities=27% Similarity=0.304 Sum_probs=33.2
Q ss_pred CCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeecc
Q 002094 143 SLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLG 222 (967)
Q Consensus 143 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 222 (967)
+|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3344444444443 233334444444444444444443333334444444444444444443333333333333333333
Q ss_pred Ccccc
Q 002094 223 KNKFS 227 (967)
Q Consensus 223 ~n~l~ 227 (967)
+|+++
T Consensus 111 ~N~l~ 115 (193)
T 2wfh_A 111 GNDIS 115 (193)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 33333
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=5.2e-15 Score=165.98 Aligned_cols=267 Identities=12% Similarity=0.133 Sum_probs=175.1
Q ss_pred CCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCccccccccCCe
Q 002094 115 SFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIWFLRSLQS 194 (967)
Q Consensus 115 ~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (967)
.+..++.+.+.++ ++ .|+...|.++ +|+.+.|.+| ++.+...+|.++ +|+.+.|.. .++...+.+|.++++|+.
T Consensus 111 ~~~~l~~i~ip~~-i~-~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 111 ILKGYNEIILPNS-VK-SIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp ECSSCSEEECCTT-CC-EECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred ecCCccEEEECCc-cC-EehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 3466677776643 33 4666667764 6777777665 665666667664 577777764 566566677777777888
Q ss_pred EeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCCCEEEccCCCC
Q 002094 195 LDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSCSSLSLKGNSF 274 (967)
Q Consensus 195 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 274 (967)
++|++|.++.+....|. ..+|+.+.|..+ +..+...+|.++++|+.+++..| ++.....+|.+ .+|+.+.| .+.+
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i 259 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGV 259 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCc
Confidence 88877777766666666 467777777744 66566677777777877777764 55455566666 67777777 4456
Q ss_pred CCcCchhhccccccccccccccccc-----cccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCCcCcCC
Q 002094 275 TGEVPDWIGKLANLESLDLSLNQFS-----GRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQNKLTGN 349 (967)
Q Consensus 275 ~~~~~~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 349 (967)
+.+...+|.++++|+.+++.+|.+. .+.+..|.++++|+.+.|. +.++.....+|.+|++|+.+++..| ++..
T Consensus 260 ~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I 337 (401)
T 4fdw_A 260 TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQI 337 (401)
T ss_dssp CEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEE
T ss_pred cEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEE
Confidence 6566677777777887777776654 3455667777778887777 4466666777777777887777554 4422
Q ss_pred CChhhhcccccEEeccCCCCCCCCCCCcccccccCC-CCccEEEccCCccc
Q 002094 350 IPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSY-QGLQVLDLSSNALS 399 (967)
Q Consensus 350 ~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~-~~L~~L~L~~N~l~ 399 (967)
-+..+...+|+.+++.+|.+..... ..+..+ .+++.|++..+.+.
T Consensus 338 ~~~aF~~~~L~~l~l~~n~~~~l~~-----~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 338 NFSAFNNTGIKEVKVEGTTPPQVFE-----KVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTSSSSSCCCEEEECCSSCCBCCC-----SSCCCSCTTCCEEEECGGGHH
T ss_pred cHHhCCCCCCCEEEEcCCCCccccc-----ccccCCCCCccEEEeCHHHHH
Confidence 2333333477777777776654332 122233 35677777666554
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=1.3e-16 Score=174.02 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=100.0
Q ss_pred hccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCcc-------------ccHHH--------HHHHHHHHcCCCCCc
Q 002094 682 ALLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLI-------------KSQED--------FEKEMKTLGKIRHHN 740 (967)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-------------~~~~~--------~~~E~~~l~~l~h~n 740 (967)
..|...+.||+|++|.||+|...+|+.||||+++..... ..... ...|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 357888999999999999999989999999987542110 01111 234566666664433
Q ss_pred ee--eeeeEEEcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeCCC
Q 002094 741 LV--ALEGYYWTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLIDSS 818 (967)
Q Consensus 741 iv--~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~~~ 818 (967)
+. ..+++ ...++||||++|++|.+.... .....++.|++.++.|||+.|||||||||.|||++++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence 32 22222 123799999999888765421 1234688999999999999999999999999999876
Q ss_pred C----------CeEEeeccccccc
Q 002094 819 G----------EPKVGDFGLARLL 832 (967)
Q Consensus 819 ~----------~~kl~Dfg~a~~~ 832 (967)
+ .+.|+||+-+...
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCcccccccccceEEEEeCCcccC
Confidence 6 3899999987643
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=2.4e-14 Score=161.39 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=64.9
Q ss_pred CCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCc
Q 002094 404 SNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSS 483 (967)
Q Consensus 404 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 483 (967)
..|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++......|.++.+|+.++|.++ ++..-..+|.++.+
T Consensus 270 ~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~ 344 (394)
T 4fs7_A 270 SLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTS 344 (394)
T ss_dssp CTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTT
T ss_pred cccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCC
Confidence 3444444444444433322 1234555556666666543 44344455666666666666533 44344456666666
Q ss_pred cceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCce
Q 002094 484 LTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLS 534 (967)
Q Consensus 484 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 534 (967)
|+.++|..| ++.+...+|.++.+|+.+++..+ ++ .+..+|.+.++|+.
T Consensus 345 L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 345 LSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 666666655 55455566666666666666544 22 22345555555544
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=4.5e-17 Score=164.76 Aligned_cols=138 Identities=22% Similarity=0.248 Sum_probs=95.3
Q ss_pred ccCCCCCCeEecCCCccCccccc------cccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCcccc
Q 002094 89 LLRLQFLQVLSLSNNNFTGTINA------DLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESL 162 (967)
Q Consensus 89 l~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l 162 (967)
+.....++.++++.++++|.+|. .|..+++|++|+|++|.+++ +| .+..+++|++|+|++|+++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchh
Confidence 44556777777777777777665 67777777777777777774 55 3577777777777777777 456666
Q ss_pred ccccccceeeecccccccccCccccccccCCeEeecCCcCCCccc-ccccCCCCCCeeeccCccccccCCc
Q 002094 163 SFCSSLESVNFSSNRLSGQLPYGIWFLRSLQSLDLSNNLLEGEIV-KGISNLYDLRAIKLGKNKFSGQLPE 232 (967)
Q Consensus 163 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~ 232 (967)
..+++|++|+|++|++++ +| .+..+++|++|+|++|.+++... ..+..+++|++|++++|++++..|.
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 677777777777777775 34 56677777777777777775433 4566666677777777766655443
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=2.3e-14 Score=161.54 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=60.6
Q ss_pred CcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCcc
Q 002094 405 NIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSL 484 (967)
Q Consensus 405 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 484 (967)
.|..+.+|+.+.+..+ +.......|.++.+|+.++|.++ ++......|.++.+|+.+.+..| ++..-..+|.++++|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 4445555555555433 33334455666666666666543 54444566667777777777655 554555677777777
Q ss_pred ceeeccCCcCcCccchhhhcccCccEE
Q 002094 485 TSLILSQNNLTGPVPAAIANLSNLKYV 511 (967)
Q Consensus 485 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L 511 (967)
+.+++..+ ++ .+..+|.++++|+.+
T Consensus 369 ~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 369 KKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CEEEECCC-CE-EhhheecCCCCCcEE
Confidence 77777654 33 234567777777654
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.7e-16 Score=160.55 Aligned_cols=136 Identities=20% Similarity=0.261 Sum_probs=92.4
Q ss_pred ccCCCCCcEEEcCCCCCCCCCCc-----hhhhcCCCCceEeccccccCCCCccccccccccceeeecccccccccCcccc
Q 002094 113 LASFGTLQVVDFSENNLSGLIPD-----EFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIW 187 (967)
Q Consensus 113 ~~~l~~L~~L~Ls~n~~~~~ip~-----~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 187 (967)
+.....++.++++.+.++|.+|. ..|..+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777777777777777665 235777888888888888876 55 7777888888888888877 5666667
Q ss_pred ccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCC-cCccCCCCccEEeccccccCCC
Q 002094 188 FLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLP-EDIGGCSMLKVLDFGVNSLSGS 253 (967)
Q Consensus 188 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~ 253 (967)
.+++|++|+|++|.+++. + .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+.+.
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 777788888887777753 2 46666667777777776664322 3455556666666666655543
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=7.7e-15 Score=145.15 Aligned_cols=131 Identities=19% Similarity=0.201 Sum_probs=79.9
Q ss_pred cccccchhcccccccccccCCCcCCcc-cccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccce
Q 002094 408 DLSSLMLLNMSMNYLFGSIPASIGKLK-AIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTS 486 (967)
Q Consensus 408 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 486 (967)
++.+|+.|++++|.+.. +|. +..+. +|+.|++++|++++. ..+..+++|++|+|++|+|++..+..|..+++|+.
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 34445555555555542 232 33332 666666666666643 45666667777777777776544444567777777
Q ss_pred eeccCCcCcCccch--hhhcccCccEEeccCCccccCCch----hhhhccCCceEEecCCcccc
Q 002094 487 LILSQNNLTGPVPA--AIANLSNLKYVDLSFNDLSGILPK----ELINLSHLLSFNISHNHLHG 544 (967)
Q Consensus 487 L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~l~~L~~L~l~~N~l~~ 544 (967)
|+|++|+|+ .+|. .+..+++|+.|++++|+++. +|. .+..+++|+.||+++|....
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 777777775 3444 66777777777777777763 344 36777777777777776653
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=9.7e-15 Score=143.29 Aligned_cols=109 Identities=24% Similarity=0.231 Sum_probs=81.4
Q ss_pred ccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccC
Q 002094 436 IQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSF 515 (967)
Q Consensus 436 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 515 (967)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356777777776 4565553 6777777777777777777777788888888888888776666777788888888888
Q ss_pred CccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 516 NDLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 516 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
|+|++..+..|..+++|+.|+|++|+|++.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88877766677778888888888888877665
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.9e-14 Score=142.24 Aligned_cols=105 Identities=23% Similarity=0.236 Sum_probs=49.8
Q ss_pred cCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCCh--hhhcCCCCCEEE
Q 002094 191 SLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPD--SLQRLNSCSSLS 268 (967)
Q Consensus 191 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~ 268 (967)
+|++|+|++|.+++. ..|..+++|++|+|++|++++..+..|..+++|++|++++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444432 33444444444444444444332233344555555555555553 2333 445555555555
Q ss_pred ccCCCCCCcCch----hhccccccccccccccccc
Q 002094 269 LKGNSFTGEVPD----WIGKLANLESLDLSLNQFS 299 (967)
Q Consensus 269 L~~n~l~~~~~~----~l~~l~~L~~L~L~~N~l~ 299 (967)
+++|.++. .|. .+..+++|++||+++|.+.
T Consensus 120 l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 55555542 233 2555555555555555543
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=9.4e-14 Score=136.65 Aligned_cols=108 Identities=22% Similarity=0.279 Sum_probs=69.9
Q ss_pred cEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCC
Q 002094 437 QVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFN 516 (967)
Q Consensus 437 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 516 (967)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666664 4555443 56666666666666666666666777777777777776655555666777777777777
Q ss_pred ccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 517 DLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 517 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
+|++..+..|..+++|+.|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7775555556667777777777776665443
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.2e-13 Score=131.51 Aligned_cols=107 Identities=26% Similarity=0.241 Sum_probs=80.0
Q ss_pred chhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCC
Q 002094 413 MLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQN 492 (967)
Q Consensus 413 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 492 (967)
+.+++++|.+. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44555555554 3444332 56777778888877777777888888888888888888777777788888888888888
Q ss_pred cCcCccchhhhcccCccEEeccCCccccCC
Q 002094 493 NLTGPVPAAIANLSNLKYVDLSFNDLSGIL 522 (967)
Q Consensus 493 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 522 (967)
+|++..+..|.++++|++|+|++|+++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 888777777888888888888888887553
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=3e-15 Score=166.32 Aligned_cols=171 Identities=19% Similarity=0.157 Sum_probs=87.3
Q ss_pred CCCCCeEecCCCccCccccccccCC-----CCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccccCCCCccccc---
Q 002094 92 LQFLQVLSLSNNNFTGTINADLASF-----GTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNNLTGPIPESLS--- 163 (967)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~--- 163 (967)
+++|+.|+|++|+++......++.. ++|++|+|++|.+++.....+...+++|++|+|++|+++......++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567777777777775444333332 56777777777765433334444556666666666666543333332
Q ss_pred --cccccceeeecccccccc----cCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCC
Q 002094 164 --FCSSLESVNFSSNRLSGQ----LPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGC 237 (967)
Q Consensus 164 --~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 237 (967)
..++|++|+|++|+|+.. ++..+..+++|++|+|++|.|++.... .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 235566666666665532 222334455555555555555432211 112233344
Q ss_pred CCccEEeccccccCCC----CChhhhcCCCCCEEEccCCCCCCcCchhh
Q 002094 238 SMLKVLDFGVNSLSGS----LPDSLQRLNSCSSLSLKGNSFTGEVPDWI 282 (967)
Q Consensus 238 ~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~l 282 (967)
++|++|+|++|.|+.. ++..+...++|++|+|++|.|+......+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 4555555555555432 22333444555666666665554433333
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=5.8e-13 Score=130.97 Aligned_cols=106 Identities=26% Similarity=0.234 Sum_probs=76.6
Q ss_pred chhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCC
Q 002094 413 MLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQN 492 (967)
Q Consensus 413 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 492 (967)
+.+++++|.+. .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34455555553 4444443 56777777777777666777777778888888888887666666788888888888888
Q ss_pred cCcCccchhhhcccCccEEeccCCccccC
Q 002094 493 NLTGPVPAAIANLSNLKYVDLSFNDLSGI 521 (967)
Q Consensus 493 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 521 (967)
+|++..+..|..+++|++|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 88866666688888888888888888743
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.36 E-value=3.1e-11 Score=135.89 Aligned_cols=135 Identities=14% Similarity=0.217 Sum_probs=82.3
Q ss_pred CCCCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccc
Q 002094 401 VIPSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKN 480 (967)
Q Consensus 401 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 480 (967)
+-..+|.++..|+.+.+..+.. ......|.++..|+.+.+. +.++......|.++.+|+.+.|..+ ++..-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 4455666777777777655443 2445567777777777775 3455455566777777777777654 55445567777
Q ss_pred cCccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcc
Q 002094 481 CSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHL 542 (967)
Q Consensus 481 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l 542 (967)
+.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 888888887644 665666778888888888887775431 3455566677776665544
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=2.5e-14 Score=158.88 Aligned_cols=158 Identities=22% Similarity=0.247 Sum_probs=75.9
Q ss_pred CCCceEeccccccCCCCccccccc-----cccceeeecccccccccCccc-cccccCCeEeecCCcCCCccccccc----
Q 002094 142 GSLREVSFANNNLTGPIPESLSFC-----SSLESVNFSSNRLSGQLPYGI-WFLRSLQSLDLSNNLLEGEIVKGIS---- 211 (967)
Q Consensus 142 ~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~~~---- 211 (967)
++|++|+|++|+++......+... ++|++|+|++|+|+......+ ..+++|++|+|++|.+++.....++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 344455555555443322222222 455566666665543322222 2345566666666666544433332
Q ss_pred -CCCCCCeeeccCcccccc----CCcCccCCCCccEEeccccccCCC----CChhhhcCCCCCEEEccCCCCCCcC----
Q 002094 212 -NLYDLRAIKLGKNKFSGQ----LPEDIGGCSMLKVLDFGVNSLSGS----LPDSLQRLNSCSSLSLKGNSFTGEV---- 278 (967)
Q Consensus 212 -~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~---- 278 (967)
..++|++|+|++|.++.. ++..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 334566666666665432 222334555666666666665532 2334445555666666666655322
Q ss_pred chhhccccccccccccccccc
Q 002094 279 PDWIGKLANLESLDLSLNQFS 299 (967)
Q Consensus 279 ~~~l~~l~~L~~L~L~~N~l~ 299 (967)
...+...++|++|+|++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 222233344555555555444
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=2.5e-11 Score=136.72 Aligned_cols=336 Identities=12% Similarity=0.188 Sum_probs=161.1
Q ss_pred cCccccccccCCC-CCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccc---cCCCCccccccccccceeeeccccccc
Q 002094 105 FTGTINADLASFG-TLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNN---LTGPIPESLSFCSSLESVNFSSNRLSG 180 (967)
Q Consensus 105 l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~N~l~~ 180 (967)
++.+-..+|.++. .|+.+.|..+ ++ .|....|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 3444455666664 4777777654 44 4666667777777777776653 44444556666666666665443 333
Q ss_pred ccCccccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhc
Q 002094 181 QLPYGIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQR 260 (967)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 260 (967)
....+|..+.+|+.+.+..+ +.......|..+..|+.+.+..+ ++.....+|.+ ..|+.+.+..+-.. ....+|.+
T Consensus 128 I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~ 203 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSE 203 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTT
T ss_pred ehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhh
Confidence 44455566666666666432 33344455555555555555443 22233333432 34555544433221 22334444
Q ss_pred CCCCCEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEE
Q 002094 261 LNSCSSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAID 340 (967)
Q Consensus 261 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 340 (967)
+.+++......+..... ...+.......... + ..+.....+..+.+. +.++.....+|.++.+
T Consensus 204 c~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~----- 266 (394)
T 4gt6_A 204 CFALSTITSDSESYPAI-DNVLYEKSANGDYA-----L-----IRYPSQREDPAFKIP-NGVARIETHAFDSCAY----- 266 (394)
T ss_dssp CTTCCEEEECCSSSCBS-SSCEEEECTTSCEE-----E-----EECCTTCCCSEEECC-TTEEEECTTTTTTCSS-----
T ss_pred ccccceecccccccccc-cceeeccccccccc-----c-----cccccccccceEEcC-CcceEcccceeeeccc-----
Confidence 44444444333332211 10000000000000 0 000011112222221 1112222333444444
Q ss_pred ccCCcCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhccccc
Q 002094 341 VSQNKLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMN 420 (967)
Q Consensus 341 l~~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 420 (967)
|+.+.+.++..+ +...+|.++++|+.+.+. +
T Consensus 267 -----------------------------------------------L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 267 -----------------------------------------------LASVKMPDSVVS-IGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp -----------------------------------------------CCEEECCTTCCE-ECTTTTTTCTTCCEEECC-T
T ss_pred -----------------------------------------------ccEEecccccce-ecCcccccccccccccCC-C
Confidence 444444332221 334455555556655554 3
Q ss_pred ccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccch
Q 002094 421 YLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPA 500 (967)
Q Consensus 421 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 500 (967)
.+.......|.++.+|+.++|.++ ++......|.++.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... .
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~ 372 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---N 372 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---H
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---h
Confidence 344344556666677777777654 44445566777777777777644 554555678888888888888775431 3
Q ss_pred hhhcccCccEEeccCCcc
Q 002094 501 AIANLSNLKYVDLSFNDL 518 (967)
Q Consensus 501 ~~~~l~~L~~L~Ls~N~l 518 (967)
.|....+|+.+.+..|.+
T Consensus 373 ~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 373 AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCBCCCCC----------
T ss_pred hhhccCCCCEEEeCCCCE
Confidence 566677788877776654
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.8e-12 Score=143.42 Aligned_cols=106 Identities=26% Similarity=0.326 Sum_probs=61.9
Q ss_pred EEecCC-cccccCcccccCCCCCCEEEcCC-CCCCCcCCccccccCccceeeccCCcCcCccchhhhcccCccEEeccCC
Q 002094 439 LDFSDN-WLNGTIPPQIGGAVSLKELKLEK-NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFN 516 (967)
Q Consensus 439 L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 516 (967)
++++++ .|+ .+|. +..+++|++|+|++ |.|++..+..|+++++|+.|+|++|+|++..|..|.+|++|++|||++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 555 3455 55555666666654 6666555555666666666666666666655556666666666666666
Q ss_pred ccccCCchhhhhccCCceEEecCCcccccCC
Q 002094 517 DLSGILPKELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 517 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
+|++..+..|..++ |+.|+|.+|+|.+...
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 66655555554444 6666666666665443
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.2e-11 Score=136.80 Aligned_cols=130 Identities=20% Similarity=0.105 Sum_probs=81.2
Q ss_pred hccccc-ccccccCCCcCCcccccEEEecC-CcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCC
Q 002094 415 LNMSMN-YLFGSIPASIGKLKAIQVLDFSD-NWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQN 492 (967)
Q Consensus 415 L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 492 (967)
++++++ .|. .+|. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 345554 554 3555 66666677777774 7777666667777777777777777777777777777777777777777
Q ss_pred cCcCccchhhhcccCccEEeccCCccccCCc-hhhhhccCCceEEecCCcccccCC
Q 002094 493 NLTGPVPAAIANLSNLKYVDLSFNDLSGILP-KELINLSHLLSFNISHNHLHGELP 547 (967)
Q Consensus 493 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p 547 (967)
+|++..+..|..++ |+.|+|++|++...-. .+|..+.......+..+.+++.-|
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 77766555666555 7777777777764322 233333333333344455554444
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.11 E-value=7.2e-11 Score=124.91 Aligned_cols=137 Identities=12% Similarity=0.056 Sum_probs=107.7
Q ss_pred cCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEEcCCceeEEEEecC
Q 002094 684 LNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYWTPSLQLLIYEFIS 762 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 762 (967)
|+....++.|+.+.||++... ++.+++|+...... .....+.+|+++++.+. +..+.++++++...+..++||||++
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 455667888888999999754 78999999875321 22345889999988884 6678889999988888999999999
Q ss_pred CCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 002094 763 SGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHH------------------------------------------ 800 (967)
Q Consensus 763 ~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~------------------------------------------ 800 (967)
|.++.+.+.. ......++.+++++++.||+
T Consensus 94 G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 94 GVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred CeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 9999876421 12234688899999999998
Q ss_pred -----------------CCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 801 -----------------TNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 801 -----------------~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
..++|+|+++.||+++.+..+.|+||+.+.
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348899999999999876556799999775
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.04 E-value=5.4e-11 Score=130.70 Aligned_cols=210 Identities=15% Similarity=0.131 Sum_probs=108.7
Q ss_pred CCeeeeeeecCCCCCc-c-------ccccccCCCCCCeEecCCCccCccccccccCCCCCcEEEcCCCCCCCCCCchhhh
Q 002094 68 TKRVVGLTLDGFSLSG-H-------IGRGLLRLQFLQVLSLSNNNFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFR 139 (967)
Q Consensus 68 ~~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~ 139 (967)
..+|+.|.+...+..| . +..++.++++|+.|.+.++..... ++++... +.+ ..++.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~--------------~is~~~~-~~L-~~ll~ 169 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ--------------EISWIEQ-VDL-SPVLD 169 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC--------------CGGGCBC-CBC-HHHHH
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc--------------ccccccc-cCH-HHHHh
Confidence 4567788877665543 2 133455677888887765432110 0000000 011 12334
Q ss_pred cCCCCceEeccccccCCCCccccccccccceeeecccccccccCcccc--ccccCCeEeecC--CcCCCc-----ccccc
Q 002094 140 QCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSSNRLSGQLPYGIW--FLRSLQSLDLSN--NLLEGE-----IVKGI 210 (967)
Q Consensus 140 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--n~l~~~-----~~~~~ 210 (967)
.+++|+.|+|++|.-. .++. +. +++|++|+|..+.+.......+. .+++|++|+|+. |...+. +...+
T Consensus 170 ~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred cCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 5555555555554211 1122 22 55666666665555433222332 456666666542 111110 01112
Q ss_pred --cCCCCCCeeeccCccccccCCcCcc---CCCCccEEeccccccCCC----CChhhhcCCCCCEEEccCCCCCCcCchh
Q 002094 211 --SNLYDLRAIKLGKNKFSGQLPEDIG---GCSMLKVLDFGVNSLSGS----LPDSLQRLNSCSSLSLKGNSFTGEVPDW 281 (967)
Q Consensus 211 --~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 281 (967)
..+++|++|+|.+|.+.+..+..+. .+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.|+...-..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~ 326 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKE 326 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHH
Confidence 2356777777777777643333222 467888888888887753 2334456788888888888877543333
Q ss_pred hccccccccccccccc
Q 002094 282 IGKLANLESLDLSLNQ 297 (967)
Q Consensus 282 l~~l~~L~~L~L~~N~ 297 (967)
+...- ...++++.++
T Consensus 327 l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 327 LQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHC-CSEEECCSBC
T ss_pred HHHHc-CCEEEecCCc
Confidence 33311 2457777776
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=2.5e-10 Score=125.41 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=28.3
Q ss_pred CCCCCEEEccCCCCCCcCchhhc---cccccccccccccccccc----cCCCCCcccccceEEcccCcCC
Q 002094 261 LNSCSSLSLKGNSFTGEVPDWIG---KLANLESLDLSLNQFSGR----IPSSIGNLVFLKELNISMNQFT 323 (967)
Q Consensus 261 l~~L~~L~L~~n~l~~~~~~~l~---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 323 (967)
+++|+.|+|.+|.+.+..+..+. .+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.|+
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 45555555555555432222222 244555555555555432 2222233445555555555444
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=7.6e-10 Score=116.88 Aligned_cols=127 Identities=14% Similarity=0.117 Sum_probs=96.2
Q ss_pred ccC-CCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCc--eeeeeeEEEcCCceeEEEEecCCCc
Q 002094 689 ELG-RGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHN--LVALEGYYWTPSLQLLIYEFISSGS 765 (967)
Q Consensus 689 ~lG-~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gs 765 (967)
.++ .|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++...++..++||||++|.+
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~ 101 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD 101 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcc
Confidence 344 55569999998777888999987643 1245788888888885434 5568888887788899999999988
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------
Q 002094 766 LYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTN------------------------------------------- 802 (967)
Q Consensus 766 L~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~------------------------------------------- 802 (967)
+. ... .+ ...++.++++.++.||+..
T Consensus 102 l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 102 LL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp TT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred cC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 84 211 11 2256778888888888643
Q ss_pred ---------------cccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 803 ---------------IIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 803 ---------------ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
++|+|++|.||+++.++.+.++|||.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 8999999999999876666799999875
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=1.3e-09 Score=120.96 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=104.4
Q ss_pred CCccCCCCceEEEEEEeCCCcEEEEEEee--cCCccccHHHHHHHHHHHcCCC--CCceeeeeeEEEcC---CceeEEEE
Q 002094 687 DCELGRGGFGVVYRTILQDGRSVAIKKLT--VSGLIKSQEDFEKEMKTLGKIR--HHNLVALEGYYWTP---SLQLLIYE 759 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e 759 (967)
.+.++.|.++.||+.... +..+++|+.. ..........+.+|+++++.+. +..+++++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456899999999999876 4688888776 3332233457889999998886 45578888888766 45799999
Q ss_pred ecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 002094 760 FISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHH--------------------------------------- 800 (967)
Q Consensus 760 ~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~--------------------------------------- 800 (967)
|++|..+.+... ..++..++..++.+++++|+.||+
T Consensus 122 ~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 999977743211 126778888999999999999996
Q ss_pred -------------------CCcccCCCCCCCEEeCCCCC--eEEeeccccccc
Q 002094 801 -------------------TNIIHYNLKSTNVLIDSSGE--PKVGDFGLARLL 832 (967)
Q Consensus 801 -------------------~~ivH~Dik~~Nill~~~~~--~kl~Dfg~a~~~ 832 (967)
.+++|||+++.||+++.++. +.++||+.+..-
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 35899999999999997753 589999988643
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.95 E-value=3.5e-08 Score=110.29 Aligned_cols=123 Identities=14% Similarity=0.150 Sum_probs=66.0
Q ss_pred CCCcccccccchhcccccccccccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccC
Q 002094 403 PSNIGDLSSLMLLNMSMNYLFGSIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCS 482 (967)
Q Consensus 403 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 482 (967)
..+|.++..|+.+.+..+ +...-...|.++.+|+.+.+..+ ++......|.++.+|+.+.+.++.++.....+|.++.
T Consensus 233 ~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 233 DGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCC
Confidence 344555555555555443 33333445555566666666433 3333344555666666666666655544455666666
Q ss_pred ccceeeccCCcCcCccchhhhcccCccEEeccCCccccCCchhhhhc
Q 002094 483 SLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINL 529 (967)
Q Consensus 483 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 529 (967)
+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.+.
T Consensus 311 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 311 KLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred CCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 6666666543 54444556666666666666543 443444445443
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.94 E-value=2.7e-08 Score=111.17 Aligned_cols=303 Identities=12% Similarity=0.054 Sum_probs=180.6
Q ss_pred cccccccCCeEeecCCcCCCcccccccCCCCCCeeeccCccccccCCcCccCCCCccEEeccccccCCCCChhhhcCCCC
Q 002094 185 GIWFLRSLQSLDLSNNLLEGEIVKGISNLYDLRAIKLGKNKFSGQLPEDIGGCSMLKVLDFGVNSLSGSLPDSLQRLNSC 264 (967)
Q Consensus 185 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 264 (967)
++....+|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~---------------- 101 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER---------------- 101 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT----------------
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce----------------
Confidence 345566677776653 355455556666666666666543 444444455554 3444443321
Q ss_pred CEEEccCCCCCCcCchhhccccccccccccccccccccCCCCCcccccceEEcccCcCCCCCChhhhcCCCCcEEEccCC
Q 002094 265 SSLSLKGNSFTGEVPDWIGKLANLESLDLSLNQFSGRIPSSIGNLVFLKELNISMNQFTGGLPESMMNCGNLLAIDVSQN 344 (967)
Q Consensus 265 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 344 (967)
++.+...+|.. .+|+.+.+..+- .......|.+. +|+.+.+..+ ++......|..+.+++.+.+..+
T Consensus 102 ---------l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~ 168 (379)
T 4h09_A 102 ---------VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSN 168 (379)
T ss_dssp ---------CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTT
T ss_pred ---------eeEeccceecc-CCcccccCCCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccc
Confidence 22222233332 245555554332 21222233332 3444444332 33344556666777777666554
Q ss_pred cCcCCCChhhhcccccEEeccCCCCCCCCCCCcccccccCCCCccEEEccCCcccCCCCCCcccccccchhccccccccc
Q 002094 345 KLTGNIPTWIFKMGLQTVSLSGNRLGESMQYPSFASMKDSYQGLQVLDLSSNALSGVIPSNIGDLSSLMLLNMSMNYLFG 424 (967)
Q Consensus 345 ~l~~~~p~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 424 (967)
.................. .........+..+.+..+. .......+....+|+.+.+..+ +..
T Consensus 169 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~ 230 (379)
T 4h09_A 169 NKNYVAENYVLYNKNKTI----------------LESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTT 230 (379)
T ss_dssp CSSEEEETTEEEETTSSE----------------EEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCE
T ss_pred cceeecccceecccccce----------------eccccccccccccccccce-eEEeecccccccccceeeeccc-eeE
Confidence 432111111000000000 0011122334444443322 2244556677778888877654 444
Q ss_pred ccCCCcCCcccccEEEecCCcccccCcccccCCCCCCEEEcCCCCCCCcCCccccccCccceeeccCCcCcCccchhhhc
Q 002094 425 SIPASIGKLKAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIAN 504 (967)
Q Consensus 425 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 504 (967)
.....|.++..|+.+.+..+ ++......|.++.+|+.+.+..+ +.......|.++++|+.+.+.++.++.+...+|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 56678889999999999876 66566778888999999999754 55456678999999999999999998777889999
Q ss_pred ccCccEEeccCCccccCCchhhhhccCCceEEecCC
Q 002094 505 LSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHN 540 (967)
Q Consensus 505 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N 540 (967)
+.+|+.++|..+ ++.+-..+|.++.+|+.+.+..+
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 999999999865 77677789999999999888654
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.92 E-value=1.1e-11 Score=128.88 Aligned_cols=23 Identities=9% Similarity=-0.126 Sum_probs=17.3
Q ss_pred CCccceEEeCCCCCeeeeeeecC
Q 002094 56 PCNWVGVKCDPKTKRVVGLTLDG 78 (967)
Q Consensus 56 ~c~w~gv~c~~~~~~v~~l~l~~ 78 (967)
.|.|.|+.|++...+|+.+...+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHhcCcEEECCCCCEEEEEEecC
Confidence 58999999997766776665544
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=2.9e-09 Score=115.03 Aligned_cols=184 Identities=17% Similarity=0.129 Sum_probs=119.9
Q ss_pred CCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-CCCc--eeeeeeEEEcCC---ceeEEEEe
Q 002094 687 DCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-RHHN--LVALEGYYWTPS---LQLLIYEF 760 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~~~~~~~~~~---~~~lv~e~ 760 (967)
.+.++.|....||+.. +.+++|+.... .....+.+|+++++.+ .+.. +.+++.+..... ..|+||||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4468999999999873 56888876432 3456789999998877 3322 344444433332 34799999
Q ss_pred cCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 002094 761 ISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHH---------------------------------------- 800 (967)
Q Consensus 761 ~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~---------------------------------------- 800 (967)
++|.++.+.... .++..++..++.++++.++.||+
T Consensus 98 i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 98 IKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred cCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 999888653321 15677777888888888888885
Q ss_pred ------------------CCcccCCCCCCCEEeCC--CCCeEEeecccccccCCCccccccccc---c---------ccc
Q 002094 801 ------------------TNIIHYNLKSTNVLIDS--SGEPKVGDFGLARLLPMLDRCILSSKI---Q---------SAL 848 (967)
Q Consensus 801 ------------------~~ivH~Dik~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~---~---------gt~ 848 (967)
..++|+|+++.||++++ ...+.++||+.+..-+...+-...... . ..+
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 13699999999999987 456789999998654321110000000 0 001
Q ss_pred cccC-cccccCcccCCcccchhhHHHHHHHHHcCCCCC
Q 002094 849 GYMA-PEFACRTVKITEKCDVYGFGVLVLEVVTGKRPV 885 (967)
Q Consensus 849 ~y~a-PE~~~~~~~~t~~~Dv~slGvll~elltg~~p~ 885 (967)
+... |+.. . ......+.|+++.++|++.+|+.+|
T Consensus 253 ~~~~~~~~~-~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVL-E--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHH-H--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHH-H--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1112 2222 0 1122368999999999999999876
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.57 E-value=5.7e-09 Score=103.37 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=42.2
Q ss_pred cccccccCCCCCCeEecCCC-ccCcc----ccccccCCCCCcEEEcCCCCCCCCCCc---hhhhcCCCCceEeccccccC
Q 002094 84 HIGRGLLRLQFLQVLSLSNN-NFTGT----INADLASFGTLQVVDFSENNLSGLIPD---EFFRQCGSLREVSFANNNLT 155 (967)
Q Consensus 84 ~~~~~l~~l~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~Ls~n~~~~~ip~---~~~~~l~~L~~L~L~~n~l~ 155 (967)
.+...+...+.|++|+|++| ++... +...+...+.|++|+|++|.|...... ..+...++|++|+|++|+|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34556677788888888888 77643 334455566777777777776532111 11233345555555555554
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=2.3e-08 Score=103.84 Aligned_cols=105 Identities=20% Similarity=0.189 Sum_probs=62.6
Q ss_pred cCCcccccE--EEecCCccc---ccCcccccCCCCCCEEEcCCCCCCC--cCCccccccCccceeeccCCcCcCccchhh
Q 002094 430 IGKLKAIQV--LDFSDNWLN---GTIPPQIGGAVSLKELKLEKNFLSG--RIPSQIKNCSSLTSLILSQNNLTGPVPAAI 502 (967)
Q Consensus 430 ~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 502 (967)
+...+.|+. ++++.|+.. +.++.....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444444444 555555332 1112222345667777777777776 3455666777777777777777754 234
Q ss_pred hccc--CccEEeccCCccccCCc-------hhhhhccCCceEE
Q 002094 503 ANLS--NLKYVDLSFNDLSGILP-------KELINLSHLLSFN 536 (967)
Q Consensus 503 ~~l~--~L~~L~Ls~N~l~~~~p-------~~l~~l~~L~~L~ 536 (967)
..+. +|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 77777777777776555 2356677777665
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=3.6e-07 Score=99.28 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=98.3
Q ss_pred ccCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCC----CceeeeeeEEEcCCceeEEE
Q 002094 683 LLNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRH----HNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~ 758 (967)
.+...+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~---~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD---SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH---HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 3455667999999999998 677888876432 224568899988877755 224455544 5678999
Q ss_pred EecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 002094 759 EFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT------------------------------------- 801 (967)
Q Consensus 759 e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~------------------------------------- 801 (967)
||++|.++...... .++..++..++.++++.++.||+.
T Consensus 107 e~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 107 KYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp ECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99999888643321 156666777888888888888842
Q ss_pred --------------------------CcccCCCCCCCEEeCCCCCeEEeeccccccc
Q 002094 802 --------------------------NIIHYNLKSTNVLIDSSGEPKVGDFGLARLL 832 (967)
Q Consensus 802 --------------------------~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~ 832 (967)
.++|+|++|.||+++.+..+.++||+.+..-
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 2389999999999998666799999998654
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=6.7e-08 Score=95.59 Aligned_cols=112 Identities=13% Similarity=0.157 Sum_probs=54.2
Q ss_pred CcccccEEEecCC-ccccc----CcccccCCCCCCEEEcCCCCCCCc----CCccccccCccceeeccCCcCcCc----c
Q 002094 432 KLKAIQVLDFSDN-WLNGT----IPPQIGGAVSLKELKLEKNFLSGR----IPSQIKNCSSLTSLILSQNNLTGP----V 498 (967)
Q Consensus 432 ~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 498 (967)
..+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|+.|+|++|.|+.. +
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 3344444444444 44321 122233344555555555555422 223334445566666666666532 2
Q ss_pred chhhhcccCccEEec--cCCccccC----CchhhhhccCCceEEecCCccc
Q 002094 499 PAAIANLSNLKYVDL--SFNDLSGI----LPKELINLSHLLSFNISHNHLH 543 (967)
Q Consensus 499 p~~~~~l~~L~~L~L--s~N~l~~~----~p~~l~~l~~L~~L~l~~N~l~ 543 (967)
...+...++|++|+| ++|.|... +...+...+.|+.|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334444556666666 55665533 2233444456666666666554
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=2.9e-06 Score=89.64 Aligned_cols=131 Identities=20% Similarity=0.213 Sum_probs=92.9
Q ss_pred ccCCCCce-EEEEEEeC-CCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEEcCCceeEEEEecCCCc
Q 002094 689 ELGRGGFG-VVYRTILQ-DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYWTPSLQLLIYEFISSGS 765 (967)
Q Consensus 689 ~lG~G~~g-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gs 765 (967)
.+..|..| .||+.... ++..+++|+-.. ....++.+|.+.++.+. +--+.++++++.+++..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 35556665 69998754 467889997653 24567888999887773 3346788888888889999999999988
Q ss_pred hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 002094 766 LYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT-------------------------------------------- 801 (967)
Q Consensus 766 L~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~-------------------------------------------- 801 (967)
+.+...... .....++.+++..++.||+.
T Consensus 107 ~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 776543211 12233455555555555531
Q ss_pred --------------CcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 802 --------------NIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 802 --------------~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 15899999999999887767799999875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.24 E-value=4.1e-06 Score=90.12 Aligned_cols=132 Identities=16% Similarity=0.095 Sum_probs=91.4
Q ss_pred CccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCC---ceeeeeeEEE-cCCceeEEEEecCC
Q 002094 688 CELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHH---NLVALEGYYW-TPSLQLLIYEFISS 763 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 763 (967)
+.++.|....||+. |+.+++|+... ......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 45788888899998 67788887432 23456799999999988642 3556666664 45567899999999
Q ss_pred CchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 002094 764 GSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHT------------------------------------------ 801 (967)
Q Consensus 764 gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~------------------------------------------ 801 (967)
.++.+..... ++......++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~-----l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 98 QILGEDGMAV-----LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp EECHHHHHTT-----SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred eECchhhhhh-----CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8886632111 23444444555555555555431
Q ss_pred ------------------CcccCCCCCCCEEeCC---CCCe-EEeecccccc
Q 002094 802 ------------------NIIHYNLKSTNVLIDS---SGEP-KVGDFGLARL 831 (967)
Q Consensus 802 ------------------~ivH~Dik~~Nill~~---~~~~-kl~Dfg~a~~ 831 (967)
.++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3589999999999987 4665 8999998764
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.19 E-value=3.5e-06 Score=89.43 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=60.5
Q ss_pred CCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCC---ceeeeeeEEEcCCceeEEEEec
Q 002094 685 NKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHH---NLVALEGYYWTPSLQLLIYEFI 761 (967)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~ 761 (967)
...+.+|.|.++.||++...+|+.++||+..... ......+..|++.++.+.+. .+++++++. ..++||||+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 3356799999999999998889999999865432 22346789999999999764 577777763 468999999
Q ss_pred CCCch
Q 002094 762 SSGSL 766 (967)
Q Consensus 762 ~~gsL 766 (967)
+|+++
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 99864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.98 E-value=8.8e-06 Score=89.60 Aligned_cols=139 Identities=15% Similarity=0.180 Sum_probs=87.4
Q ss_pred CCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCc--eeeeeeEEEcC-CceeEEEEecCC
Q 002094 687 DCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHN--LVALEGYYWTP-SLQLLIYEFISS 763 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~~~ 763 (967)
.+.++.|....+|+... +++.+++|..... ..+..|+.+++.+.... +.+++.++... +..++||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 45688899999999876 5888999977432 25888888887775432 55667766654 668999999998
Q ss_pred Cchhhh------------------hhcCCCCC--------------CCCHHHHH---------------------HHHHH
Q 002094 764 GSLYKH------------------LHDGSSRN--------------CLSWRQRF---------------------NIILG 790 (967)
Q Consensus 764 gsL~~~------------------l~~~~~~~--------------~~~~~~~~---------------------~i~~~ 790 (967)
.++.+. +|...... .-.|...+ .....
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 665421 11111000 00111110 11111
Q ss_pred HHHHHHHHhc----CCcccCCCCCCCEEeCCCCCeEEeeccccccc
Q 002094 791 MAKGLAYLHH----TNIIHYNLKSTNVLIDSSGEPKVGDFGLARLL 832 (967)
Q Consensus 791 i~~aL~~LH~----~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~ 832 (967)
+....+++.. ..++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1222223322 35799999999999987777889999988754
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.92 E-value=1.2e-05 Score=88.73 Aligned_cols=81 Identities=2% Similarity=-0.026 Sum_probs=54.5
Q ss_pred Ccc-CCCCceEEEEEEeC-------CCcEEEEEEeecCCc--cccHHHHHHHHHHHcCCC-C--CceeeeeeEEEcC---
Q 002094 688 CEL-GRGGFGVVYRTILQ-------DGRSVAIKKLTVSGL--IKSQEDFEKEMKTLGKIR-H--HNLVALEGYYWTP--- 751 (967)
Q Consensus 688 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~--- 751 (967)
+.| +.|....+|+.... +++.+++|+...... ......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88889999998754 267888887654320 101245778888887773 2 3466777776554
Q ss_pred CceeEEEEecCCCchhh
Q 002094 752 SLQLLIYEFISSGSLYK 768 (967)
Q Consensus 752 ~~~~lv~e~~~~gsL~~ 768 (967)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876543
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.88 E-value=3.5e-06 Score=80.88 Aligned_cols=63 Identities=8% Similarity=0.106 Sum_probs=27.9
Q ss_pred cccccccceeeecccc-cccccCcccccc----ccCCeEeecCCc-CCCcccccccCCCCCCeeeccCc
Q 002094 162 LSFCSSLESVNFSSNR-LSGQLPYGIWFL----RSLQSLDLSNNL-LEGEIVKGISNLYDLRAIKLGKN 224 (967)
Q Consensus 162 l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n 224 (967)
+.++++|++|+|++|. |++..-..+..+ ++|++|+|++|. +++..-..+.++++|++|+|+++
T Consensus 81 L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 81 MEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp GTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred hcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 3444445555555442 333222222221 245555555552 55444444444455555555444
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.83 E-value=4.5e-05 Score=85.40 Aligned_cols=76 Identities=16% Similarity=0.092 Sum_probs=49.3
Q ss_pred CCccCCCCceEEEEEEeC-CCcEEEEEEeecCCc------cccHHHHHHHHHHHcCCCC--C-ceeeeeeEEEcCCceeE
Q 002094 687 DCELGRGGFGVVYRTILQ-DGRSVAIKKLTVSGL------IKSQEDFEKEMKTLGKIRH--H-NLVALEGYYWTPSLQLL 756 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~l 756 (967)
.+.+|.|.++.||++... +++.|+||....... .....++..|.++++.+.. + .+.+++.+ ++...++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 347999999999999754 468899998653221 1123456778888876632 3 34455543 3455689
Q ss_pred EEEecCCC
Q 002094 757 IYEFISSG 764 (967)
Q Consensus 757 v~e~~~~g 764 (967)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.81 E-value=8.7e-06 Score=78.14 Aligned_cols=86 Identities=19% Similarity=0.199 Sum_probs=56.0
Q ss_pred ccccEEEecCCcccccCcccccCCCCCCEEEcCCCC-CCCcCCcccccc----CccceeeccCCc-CcCccchhhhcccC
Q 002094 434 KAIQVLDFSDNWLNGTIPPQIGGAVSLKELKLEKNF-LSGRIPSQIKNC----SSLTSLILSQNN-LTGPVPAAIANLSN 507 (967)
Q Consensus 434 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 507 (967)
..|+.||++++.++..--..+.++++|++|+|++|. |+..--..+..+ ++|+.|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777665545556667777777777764 554333334443 367788888774 77665666777778
Q ss_pred ccEEeccCCc-cc
Q 002094 508 LKYVDLSFND-LS 519 (967)
Q Consensus 508 L~~L~Ls~N~-l~ 519 (967)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 8888888775 44
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=5.7e-05 Score=82.69 Aligned_cols=136 Identities=15% Similarity=0.253 Sum_probs=77.5
Q ss_pred ccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCC-----CCCceeeee-e--EEEcCCceeEEEEe
Q 002094 689 ELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKI-----RHHNLVALE-G--YYWTPSLQLLIYEF 760 (967)
Q Consensus 689 ~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~-~--~~~~~~~~~lv~e~ 760 (967)
.++.|..+.||+....+| .+++|+.... ..++..|+++++.+ ..|.++... | +....+..++||||
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 466677899999987654 5899988642 23344455554443 234443311 1 12245667899999
Q ss_pred cCCCchh--------------hhhhcCC-----CC------CCCCHHHHH------------------------------
Q 002094 761 ISSGSLY--------------KHLHDGS-----SR------NCLSWRQRF------------------------------ 785 (967)
Q Consensus 761 ~~~gsL~--------------~~l~~~~-----~~------~~~~~~~~~------------------------------ 785 (967)
++|..+. ..+|... .. ....|...+
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1122110 00 011232211
Q ss_pred -HHHHHHHHHHHHHh-------------cCCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 786 -NIILGMAKGLAYLH-------------HTNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 786 -~i~~~i~~aL~~LH-------------~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
.+...+..++++|+ ..+++|+|+++.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11112334566665 3579999999999999888899999999775
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.42 E-value=0.00057 Score=72.95 Aligned_cols=135 Identities=19% Similarity=0.142 Sum_probs=91.4
Q ss_pred CCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCC---CCceeeeeeEEEcCCceeEEEEecCC
Q 002094 687 DCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR---HHNLVALEGYYWTPSLQLLIYEFISS 763 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~ 763 (967)
.+.++.|....+|+... +++.+++|+.... ....+..|++.++.+. ...+++++.++...+..++||||++|
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 35689999999999886 4778899987642 3567889988888773 35688888888888889999999998
Q ss_pred Cchhh-----------hhhcCCC-CC------------------CCCHHHHH---HHHH----------------HHHHH
Q 002094 764 GSLYK-----------HLHDGSS-RN------------------CLSWRQRF---NIIL----------------GMAKG 794 (967)
Q Consensus 764 gsL~~-----------~l~~~~~-~~------------------~~~~~~~~---~i~~----------------~i~~a 794 (967)
..+.. .+|.... .. .-+|.... ++.. .++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 75421 2333221 00 12454332 1111 11111
Q ss_pred -HHHHh----cCCcccCCCCCCCEEeCCCCCeEEeecc
Q 002094 795 -LAYLH----HTNIIHYNLKSTNVLIDSSGEPKVGDFG 827 (967)
Q Consensus 795 -L~~LH----~~~ivH~Dik~~Nill~~~~~~kl~Dfg 827 (967)
...|. ...++|+|+.+.|++++.++ +.++||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22343 23689999999999999887 8899974
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.42 E-value=0.00027 Score=75.07 Aligned_cols=77 Identities=19% Similarity=0.220 Sum_probs=55.6
Q ss_pred cCCCCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCC---CceeeeeeEEEcCCceeEEEEe
Q 002094 684 LNKDCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRH---HNLVALEGYYWTPSLQLLIYEF 760 (967)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~ 760 (967)
....+.+|.|..+.||+.+..||+.|+||+..... ......|..|++.|+.+.. -.+++++++. ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34456789999999999999999999999865443 2334568889988877632 2344555542 34799999
Q ss_pred cCCCc
Q 002094 761 ISSGS 765 (967)
Q Consensus 761 ~~~gs 765 (967)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.36 E-value=2.2e-05 Score=76.84 Aligned_cols=71 Identities=17% Similarity=0.137 Sum_probs=37.8
Q ss_pred ccccccCCCCCCeEecCCC-ccCcc----ccccccCCCCCcEEEcCCCCCCCCCC---chhhhcCCCCceEeccccccC
Q 002094 85 IGRGLLRLQFLQVLSLSNN-NFTGT----INADLASFGTLQVVDFSENNLSGLIP---DEFFRQCGSLREVSFANNNLT 155 (967)
Q Consensus 85 ~~~~l~~l~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~Ls~n~~~~~ip---~~~~~~l~~L~~L~L~~n~l~ 155 (967)
+...+.+-+.|++|+|++| +|... +-+.+..-+.|+.|+|++|+|.+..- .+.+..-+.|++|+|++|.|+
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3344555677888888774 66532 33445555666666666666652211 111233344555555555554
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.33 E-value=0.00061 Score=76.69 Aligned_cols=79 Identities=14% Similarity=0.057 Sum_probs=47.8
Q ss_pred hcCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccccccc--ccccccCcccccCc--ccCCcccchhhHHHH
Q 002094 799 HHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSSKIQ--SALGYMAPEFACRT--VKITEKCDVYGFGVL 874 (967)
Q Consensus 799 H~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~--~~~t~~~Dv~slGvl 874 (967)
+...++|||+++.||+++.++ ++++||+.+..-+...+ -.... -...|++|+..... .......++......
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D---la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD---IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ 305 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH---HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH---HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHH
Confidence 456899999999999998776 99999998875432111 00111 11346666654211 111223455577777
Q ss_pred HHHHHcC
Q 002094 875 VLEVVTG 881 (967)
Q Consensus 875 l~elltg 881 (967)
+|+.+++
T Consensus 306 ~~~~y~~ 312 (420)
T 2pyw_A 306 TWNLFNK 312 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.18 E-value=0.00011 Score=71.99 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=29.6
Q ss_pred ccccccceeeeccc-ccccc----cCccccccccCCeEeecCCcCCCccccccc----CCCCCCeeeccCcccc
Q 002094 163 SFCSSLESVNFSSN-RLSGQ----LPYGIWFLRSLQSLDLSNNLLEGEIVKGIS----NLYDLRAIKLGKNKFS 227 (967)
Q Consensus 163 ~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n~l~ 227 (967)
.+-+.|++|+|++| +|... +...+..-+.|+.|+|++|.|.+.....|+ .-+.|++|+|++|+|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33455666666654 55421 222333445555555555555533322222 2334444444444443
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.98 E-value=0.0035 Score=67.79 Aligned_cols=139 Identities=12% Similarity=0.110 Sum_probs=80.8
Q ss_pred CccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCC--ceeeeeeE-----EEcCCceeEEEEe
Q 002094 688 CELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHH--NLVALEGY-----YWTPSLQLLIYEF 760 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~-----~~~~~~~~lv~e~ 760 (967)
..++ |....||+....+|+.+++|...... .....+..|..+++.+... .+++++.. ....+..+++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 88889999887778789999886432 2345677787777666311 23444432 1224556789999
Q ss_pred cCCCchhh-----------h---hhc----CC--CCCCCCHHHH----------------------HHHHHHHHHHHHHH
Q 002094 761 ISSGSLYK-----------H---LHD----GS--SRNCLSWRQR----------------------FNIILGMAKGLAYL 798 (967)
Q Consensus 761 ~~~gsL~~-----------~---l~~----~~--~~~~~~~~~~----------------------~~i~~~i~~aL~~L 798 (967)
++|..+.. . +|. .. .....++... ...+..++..++..
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 98854321 0 111 00 0111222211 01111222222222
Q ss_pred ----hcCCcccCCCCCCCEEeCCCCCeEEeecccccc
Q 002094 799 ----HHTNIIHYNLKSTNVLIDSSGEPKVGDFGLARL 831 (967)
Q Consensus 799 ----H~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~ 831 (967)
+...++|||+++.||+++ + .+.++||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234589999999999998 4 899999988754
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.97 E-value=0.00087 Score=61.23 Aligned_cols=59 Identities=20% Similarity=0.232 Sum_probs=39.5
Q ss_pred eeeccCCcCc-CccchhhhcccCccEEeccCCccccCCchhhhhccCCceEEecCCcccccC
Q 002094 486 SLILSQNNLT-GPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGEL 546 (967)
Q Consensus 486 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 546 (967)
.++.+++.|+ ..+|..+. ++|++|||++|+|+.+.+..|..+++|+.|+|++|+|.+..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 5667777765 23443322 35788888888888777777788888888877766665433
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.93 E-value=0.00063 Score=72.69 Aligned_cols=136 Identities=11% Similarity=0.098 Sum_probs=73.6
Q ss_pred CCccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCce-eeeeeEEEcCCceeEEEEec-CCC
Q 002094 687 DCELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNL-VALEGYYWTPSLQLLIYEFI-SSG 764 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g 764 (967)
.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .+++++ .++..++|+||+ +|.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 457888999999998 55888877643211 1123457776666532222 344443 344457899999 665
Q ss_pred chhh------------------hhhcCCCCC--CCC-HHHHHHHHHH--------------HHHHHH----HHhc----C
Q 002094 765 SLYK------------------HLHDGSSRN--CLS-WRQRFNIILG--------------MAKGLA----YLHH----T 801 (967)
Q Consensus 765 sL~~------------------~l~~~~~~~--~~~-~~~~~~i~~~--------------i~~aL~----~LH~----~ 801 (967)
++.. .+|...... ... +.....+... +...+. .+.. .
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 173 (301)
T 3dxq_A 94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL 173 (301)
T ss_dssp ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 4421 112211100 011 1111111110 111111 1111 2
Q ss_pred CcccCCCCCCCEEeCCCCCeEEeeccccccc
Q 002094 802 NIIHYNLKSTNVLIDSSGEPKVGDFGLARLL 832 (967)
Q Consensus 802 ~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~ 832 (967)
.++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 4799999999999 56678899999987643
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.92 E-value=0.0015 Score=71.00 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=27.5
Q ss_pred CCcccCCCCCCCEEeCCC----CCeEEeeccccccc
Q 002094 801 TNIIHYNLKSTNVLIDSS----GEPKVGDFGLARLL 832 (967)
Q Consensus 801 ~~ivH~Dik~~Nill~~~----~~~kl~Dfg~a~~~ 832 (967)
..++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 469999999999999874 67899999988654
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.65 E-value=0.0031 Score=69.20 Aligned_cols=138 Identities=14% Similarity=0.166 Sum_probs=81.9
Q ss_pred CccCCCCceEEEEEEeC--------CCcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEEcCCceeEEE
Q 002094 688 CELGRGGFGVVYRTILQ--------DGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.+..|....+|++... +++.|++|+.... ......+.+|.++++.+. +.-..++++++.. .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45666888889998864 2578999876332 234566778999888774 3223566665533 3999
Q ss_pred EecCCCchhhh-----------------hhcCCC--CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 002094 759 EFISSGSLYKH-----------------LHDGSS--RNCLS--WRQRFNIILGMAK-------------------GLAYL 798 (967)
Q Consensus 759 e~~~~gsL~~~-----------------l~~~~~--~~~~~--~~~~~~i~~~i~~-------------------aL~~L 798 (967)
||++|..+... +|.... ..... |.++.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 122211 11122 4555555544321 22333
Q ss_pred h----c----CCcccCCCCCCCEEeCCC----CCeEEeecccccc
Q 002094 799 H----H----TNIIHYNLKSTNVLIDSS----GEPKVGDFGLARL 831 (967)
Q Consensus 799 H----~----~~ivH~Dik~~Nill~~~----~~~kl~Dfg~a~~ 831 (967)
. . ..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 2 258999999999999876 7899999998753
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.60 E-value=0.01 Score=58.14 Aligned_cols=101 Identities=10% Similarity=0.041 Sum_probs=66.3
Q ss_pred chhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCCCEEeCCCCCeEEeecccccccCCCcccccccc
Q 002094 765 SLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLH-HTNIIHYNLKSTNVLIDSSGEPKVGDFGLARLLPMLDRCILSSK 843 (967)
Q Consensus 765 sL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH-~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 843 (967)
+|.+.|..... +++++++|.++.|.+.+|.-.- ++.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 78888876544 4999999999999999988762 22111233456889999999888763 1110
Q ss_pred ccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCC
Q 002094 844 IQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRP 884 (967)
Q Consensus 844 ~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p 884 (967)
.....+.|||.. . ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~-~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLG-Y-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCS-S-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhc-c-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 112236788876 2 3567888999999999999974444
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.55 E-value=0.0036 Score=70.24 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=48.2
Q ss_pred CccCCCCceEEEEEEeCC--------CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCc-eeeeeeEEEcCCceeEEE
Q 002094 688 CELGRGGFGVVYRTILQD--------GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHN-LVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 758 (967)
+.|+.|....||++...+ ++.+++|+..... ..+.+.+|..+++.+...+ .+++++.+.. .+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC---cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 457888889999998753 5789999874321 1245567888888774323 3566665432 3899
Q ss_pred EecCCCch
Q 002094 759 EFISSGSL 766 (967)
Q Consensus 759 e~~~~gsL 766 (967)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987544
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.49 E-value=0.003 Score=57.63 Aligned_cols=54 Identities=15% Similarity=0.285 Sum_probs=22.2
Q ss_pred eEecCCCccC-ccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEeccccc
Q 002094 97 VLSLSNNNFT-GTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANNN 153 (967)
Q Consensus 97 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n~ 153 (967)
.++.++++++ ..+|..+. .+|++|+|++|+|+ .+|..+|..+++|++|+|++|.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCC
Confidence 4555555554 22332211 13444444444444 3344444444444444444443
No 441
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.45 E-value=0.008 Score=64.69 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=76.1
Q ss_pred CccCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCc--eeeeeeE------EEcCCceeEEEE
Q 002094 688 CELGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHN--LVALEGY------YWTPSLQLLIYE 759 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e 759 (967)
+.|+.|....+|+....+| .+++|...... ...++..|+++++.+.... +.+++.. ....+..+++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 3577788899999987655 67889876521 1234556666665552111 2333321 122356689999
Q ss_pred ecCCCchhh--------------hhhcC----CCCC--C---CCHHHHHH------------HHHHHHHHHHHHhc----
Q 002094 760 FISSGSLYK--------------HLHDG----SSRN--C---LSWRQRFN------------IILGMAKGLAYLHH---- 800 (967)
Q Consensus 760 ~~~~gsL~~--------------~l~~~----~~~~--~---~~~~~~~~------------i~~~i~~aL~~LH~---- 800 (967)
|++|..+.. .+|.. .... . ..|...+. +...+...++++++
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 999865321 12211 0000 0 11322111 01123444555542
Q ss_pred ---CCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 801 ---TNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 801 ---~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
.+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 368999999999999877656899999775
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.17 E-value=0.0042 Score=68.42 Aligned_cols=73 Identities=11% Similarity=0.033 Sum_probs=42.5
Q ss_pred CccCCCCceEEEEEEeCC---------CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCc-eeeeeeEEEcCCceeEE
Q 002094 688 CELGRGGFGVVYRTILQD---------GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHN-LVALEGYYWTPSLQLLI 757 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv 757 (967)
+.++.|..-.+|+....+ ++.+++|+...... ...+...|.++++.+.... +.++++.. + -++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 357778888999998654 26888887654321 1112356777777663222 34555543 2 3789
Q ss_pred EEecCCCch
Q 002094 758 YEFISSGSL 766 (967)
Q Consensus 758 ~e~~~~gsL 766 (967)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.92 E-value=0.025 Score=61.18 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=27.5
Q ss_pred CcccCCCCCCCEEeCCCCCeEEeeccccccc
Q 002094 802 NIIHYNLKSTNVLIDSSGEPKVGDFGLARLL 832 (967)
Q Consensus 802 ~ivH~Dik~~Nill~~~~~~kl~Dfg~a~~~ 832 (967)
.++|+|+.+.||+++.++.+.++||+.+..-
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 6899999999999998889999999887643
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.57 E-value=0.023 Score=63.97 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=45.7
Q ss_pred CccCCCCceEEEEEEeCC-CcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCce-eeeeeEEEcCCceeEEEEecCCCc
Q 002094 688 CELGRGGFGVVYRTILQD-GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNL-VALEGYYWTPSLQLLIYEFISSGS 765 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gs 765 (967)
+.|+.|-...+|++...+ ++.+++|+..... ...-+..+|..+++.+...++ .++++.+. + ..||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 457888889999998765 4788888774322 111112578888877754333 56666652 2 35999999855
Q ss_pred h
Q 002094 766 L 766 (967)
Q Consensus 766 L 766 (967)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.09 E-value=0.029 Score=61.61 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=80.2
Q ss_pred CccCCCCceEEEEEEeCC--------CcEEEEEEeecCCcc----------ccH-------HHHHHHHHHHcCCC-CCce
Q 002094 688 CELGRGGFGVVYRTILQD--------GRSVAIKKLTVSGLI----------KSQ-------EDFEKEMKTLGKIR-HHNL 741 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~----------~~~-------~~~~~E~~~l~~l~-h~ni 741 (967)
+.+..|-...+|++...+ ++.|.+++....... -++ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346667788899988653 367888876543210 001 12335888877774 4445
Q ss_pred eeeeeEEEcCCceeEEEEecCCCchhhh-----------------hhcCCC--CCCCC--HHHHHHHHHHHH--------
Q 002094 742 VALEGYYWTPSLQLLIYEFISSGSLYKH-----------------LHDGSS--RNCLS--WRQRFNIILGMA-------- 792 (967)
Q Consensus 742 v~~~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~~--~~~~~--~~~~~~i~~~i~-------- 792 (967)
.++++++.. ..|+||++|.+|... +|.... ..... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566766532 289999997554211 122111 11122 334444443321
Q ss_pred --------------HHH----HHHhcC----CcccCCCCCCCEEeCCC------CCeEEeeccccc
Q 002094 793 --------------KGL----AYLHHT----NIIHYNLKSTNVLIDSS------GEPKVGDFGLAR 830 (967)
Q Consensus 793 --------------~aL----~~LH~~----~ivH~Dik~~Nill~~~------~~~kl~Dfg~a~ 830 (967)
.-+ +++... .++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 58999999999999876 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.62 E-value=0.03 Score=62.25 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=46.0
Q ss_pred CccCCCCceEEEEEEeCC--------CcEEEEEEeecCCccccHHHHHHHHHHHcCCC-CCceeeeeeEEEcCCceeEEE
Q 002094 688 CELGRGGFGVVYRTILQD--------GRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIR-HHNLVALEGYYWTPSLQLLIY 758 (967)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 758 (967)
+.+..|....+|+....+ ++.|++|+..... ....+..+|.++++.+. +.-..++++.+ + -+.||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 356778888999998763 5788998864432 11122456777776663 22234555433 2 37899
Q ss_pred EecCCCch
Q 002094 759 EFISSGSL 766 (967)
Q Consensus 759 e~~~~gsL 766 (967)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.40 E-value=0.25 Score=54.60 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=24.8
Q ss_pred cccCCCCCCCEEe------CCCCCeEEeecccccc
Q 002094 803 IIHYNLKSTNVLI------DSSGEPKVGDFGLARL 831 (967)
Q Consensus 803 ivH~Dik~~Nill------~~~~~~kl~Dfg~a~~ 831 (967)
++|+|+.+.||++ +++..+.++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998763
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=87.11 E-value=0.48 Score=32.94 Aligned_cols=10 Identities=20% Similarity=0.265 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 002094 612 LIAIGAAAFI 621 (967)
Q Consensus 612 ii~i~~~~~~ 621 (967)
..|++.++++
T Consensus 13 A~gVVgGv~~ 22 (44)
T 2l2t_A 13 AAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred EEeehHHHHH
Confidence 3333333333
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=79.17 E-value=1.7 Score=29.26 Aligned_cols=19 Identities=5% Similarity=0.193 Sum_probs=10.7
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 002094 608 SISALIAIGAAAFIAIGVI 626 (967)
Q Consensus 608 ~~~~ii~i~~~~~~~~~~~ 626 (967)
+..++.|+++++++.++++
T Consensus 9 s~GaIAGiVvG~v~gv~li 27 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALL 27 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHHHHH
Confidence 3456667666665544433
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.27 E-value=3.8 Score=40.04 Aligned_cols=116 Identities=10% Similarity=0.169 Sum_probs=76.6
Q ss_pred CCCceeeeeeEEEcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEeC
Q 002094 737 RHHNLVALEGYYWTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLAYLHHTNIIHYNLKSTNVLID 816 (967)
Q Consensus 737 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~~LH~~~ivH~Dik~~Nill~ 816 (967)
.||+.++. ..-.+.+...+.|+.-+.+-=...++. .+...+++++.+|+...++++.+ +|--+.|+|++++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~------~~~~eKlr~l~ni~~l~~~~~~r--~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS------FTKNEKLRYLLNIKNLEEVNRTR--YTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG------SCHHHHHHHHHHGGGGGGGGGSS--EECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh------cCHHHHHHHHHHHHHHHHHhcCc--eEEEEecceEEEc
Confidence 58888866 455556666666665443222222332 67899999999998888655544 6778999999999
Q ss_pred CCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccchhhHHHHHHHHHcCCCCCC
Q 002094 817 SSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVE 886 (967)
Q Consensus 817 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv~slGvll~elltg~~p~~ 886 (967)
.++.+++.=.|+...+ +|.-. +...=.-.+=+++..+++++..|+
T Consensus 114 ~~~~p~i~~RGik~~l-------------------~P~~~------~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 114 RDGLPIAKTRGLQNVV-------------------DPLPV------SEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp TTSCEEESCCEETTTB-------------------SCCCC------CHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCEEEEEccCccCC-------------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999866654322 22211 111122346688899999999885
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.06 E-value=5.5 Score=39.10 Aligned_cols=114 Identities=10% Similarity=0.095 Sum_probs=76.3
Q ss_pred CCCceeeeeeEEEcCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCcccCCCCCCCEEe
Q 002094 737 RHHNLVALEGYYWTPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGMAKGLA-YLHHTNIIHYNLKSTNVLI 815 (967)
Q Consensus 737 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i~~aL~-~LH~~~ivH~Dik~~Nill 815 (967)
.||++ -...-.+.+...+.|+.-+++-=...++. .+...+++++.+|+.... +++.+ +|--+.|+|+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~------~~~~eKlrll~nl~~L~~~~~~~r--~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK------TTLLSRIRAAIHLVSKVKHHSARR--LIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT------SCHHHHHHHHHHHHHHHSSCCSSS--EECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh------cCHHHHHHHHHHHHHHHHHhhhCc--eeEEEeCceEEE
Confidence 57777 33344566777777776645433334433 678899999999887766 55444 667789999999
Q ss_pred CCCCCeEEeecccccccCCCccccccccccccccccCcccccCcccCCcccch-hhHHHHHHHHHcCCCCCC
Q 002094 816 DSSGEPKVGDFGLARLLPMLDRCILSSKIQSALGYMAPEFACRTVKITEKCDV-YGFGVLVLEVVTGKRPVE 886 (967)
Q Consensus 816 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~t~~~Dv-~slGvll~elltg~~p~~ 886 (967)
|.++.+++.-.|+-.. ++|.-. + ..|. -.+=+++..++.++..|+
T Consensus 118 ~~~~~p~i~hRGi~~~-------------------lpP~e~------~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 118 NRALEPFFLHVGVKES-------------------LPPDEW------D-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CTTCCEEESCCEETTT-------------------BSSCSC------C-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eCCCcEEEEEcCCccc-------------------CCCCCC------C-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999987765432 333322 1 1222 246678888998888874
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.20 E-value=0.6 Score=52.50 Aligned_cols=60 Identities=8% Similarity=0.037 Sum_probs=17.6
Q ss_pred CCccCCCCceEEEEEEeCC-CcEEEE------EEeecCCc-cccHHHHHHHHHHHcCCCCCceeeeeeEEE
Q 002094 687 DCELGRGGFGVVYRTILQD-GRSVAI------KKLTVSGL-IKSQEDFEKEMKTLGKIRHHNLVALEGYYW 749 (967)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~-~~~vav------K~l~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 749 (967)
.+.+| ||.||+|.+.. ..+||| |..+.... .+....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45566 99999999764 367888 76654332 233456888999999999999999998865
No 453
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=64.17 E-value=6.5 Score=26.93 Aligned_cols=12 Identities=0% Similarity=0.213 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHH
Q 002094 612 LIAIGAAAFIAI 623 (967)
Q Consensus 612 ii~i~~~~~~~~ 623 (967)
+++++.++++++
T Consensus 16 ~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 16 IGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EeehhHHHHHHH
Confidence 444444444433
No 454
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=58.26 E-value=10 Score=28.50 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhheeec
Q 002094 612 LIAIGAAAFIAIGVIAVTVLNIRVR 636 (967)
Q Consensus 612 ii~i~~~~~~~~~~~~~~~~~~r~r 636 (967)
++|.++++++.+++.+++..++++|
T Consensus 13 vlGg~~~lll~~glcI~ccvkcrhR 37 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIFFSVRSRHR 37 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHhHHHHHHHHHHHHHHHhhHHHHH
Confidence 4454455555555544433333333
No 455
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=53.81 E-value=13 Score=24.15 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhee
Q 002094 608 SISALIAIGAAAFIAIGVIAVTVLNIR 634 (967)
Q Consensus 608 ~~~~ii~i~~~~~~~~~~~~~~~~~~r 634 (967)
..+++.|+.++.+++.++++..++++.
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~~ 31 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFLG 31 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhee
Confidence 346778888777777766666555543
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=49.29 E-value=34 Score=28.74 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=19.5
Q ss_pred CCchhhhcCCCCceEeccccccCCCCccccccccccceeeecc
Q 002094 133 IPDEFFRQCGSLREVSFANNNLTGPIPESLSFCSSLESVNFSS 175 (967)
Q Consensus 133 ip~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 175 (967)
|....|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33444445555555544432 3333344455555555555543
No 457
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=48.10 E-value=5.5 Score=22.07 Aligned_cols=10 Identities=40% Similarity=1.318 Sum_probs=7.6
Q ss_pred CCCCccceEE
Q 002094 54 DNPCNWVGVK 63 (967)
Q Consensus 54 ~~~c~w~gv~ 63 (967)
+.-|+|+|..
T Consensus 5 dgacswrgle 14 (23)
T 3ox7_P 5 DGACSWRGLE 14 (26)
T ss_pred Ccccccccch
Confidence 4469999975
No 458
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=44.27 E-value=30 Score=24.03 Aligned_cols=18 Identities=0% Similarity=0.038 Sum_probs=10.8
Q ss_pred eehhhHHHHHHHHHHHHH
Q 002094 605 IVLSISALIAIGAAAFIA 622 (967)
Q Consensus 605 ~~~~~~~ii~i~~~~~~~ 622 (967)
..+..+++.|+.+.++++
T Consensus 10 ~aIA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVG 27 (44)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeehHHHHHHHHHH
Confidence 345666666666666554
No 459
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=40.51 E-value=39 Score=23.51 Aligned_cols=30 Identities=7% Similarity=-0.052 Sum_probs=15.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhheeecc
Q 002094 607 LSISALIAIGAAAFIAIGVIAVTVLNIRVRS 637 (967)
Q Consensus 607 ~~~~~ii~i~~~~~~~~~~~~~~~~~~r~r~ 637 (967)
++.+++.|+.+.+++ ++++.+++-++++++
T Consensus 13 IA~gVVgGv~~~~ii-~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVV-ALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHH-HHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHH-HHHHHHHhhhhHhhc
Confidence 334444444443333 345556666777654
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.76 E-value=48 Score=27.81 Aligned_cols=47 Identities=17% Similarity=0.343 Sum_probs=30.3
Q ss_pred ccCccccccccCCCCCcEEEcCCCCCCCCCCchhhhcCCCCceEecccc
Q 002094 104 NFTGTINADLASFGTLQVVDFSENNLSGLIPDEFFRQCGSLREVSFANN 152 (967)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~L~~n 152 (967)
.++.+-..+|.++..|+.+.|-.+ ++ .|....|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcCC
Confidence 344445566667777777776654 22 466667788888888877654
No 461
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=37.12 E-value=1.1e+02 Score=31.94 Aligned_cols=131 Identities=11% Similarity=0.094 Sum_probs=70.5
Q ss_pred cCCCCceEEEEEEeCCCcEEEEEEeecCCccccHHHHHHHHHHHcCCCCCceeeeeeE-------------EE-------
Q 002094 690 LGRGGFGVVYRTILQDGRSVAIKKLTVSGLIKSQEDFEKEMKTLGKIRHHNLVALEGY-------------YW------- 749 (967)
Q Consensus 690 lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~-------------~~------- 749 (967)
.-.|. +.||.+.. ++..|+||-. . ....+.+-.++...-.+.-|+..-+... +.
T Consensus 77 s~~Gs-tgvff~~t-d~~~~VVK~s--~--~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~ 150 (342)
T 1cja_A 77 SEKGT-EGLFFVET-ESGVFIVKRS--T--NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVIT 150 (342)
T ss_dssp CCSTT-SCEEEEEE-SSCEEEEECC--T--THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred ccCCC-CCeEEEEe-CCCEEEEeCc--H--HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHH
Confidence 34444 45665555 5889999944 1 2244556666666666666653322211 00
Q ss_pred --cCCceeEEEEecCCCchhhhhhcCCCCCCCCHHHHHHHHHHH--HHHHHHHhcC----Cccc-CCCCCCCEEeCCCC-
Q 002094 750 --TPSLQLLIYEFISSGSLYKHLHDGSSRNCLSWRQRFNIILGM--AKGLAYLHHT----NIIH-YNLKSTNVLIDSSG- 819 (967)
Q Consensus 750 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~i~~~i--~~aL~~LH~~----~ivH-~Dik~~Nill~~~~- 819 (967)
..+..+++|||.+|..|.+.-+..... .+..+ .+.++ +-++..+... ..+. .--.+.|||+++++
T Consensus 151 ~l~~~~~~l~meyv~G~~L~e~~~~~~~~-~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 151 TLANQANILLMELVRGITLNKLTTTSAPE-VLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHTTCSEEEEEECCCEEESTTCCSSSHHH-HSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HhhcccceehhhhcCCCccccchhhhhhh-hcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 122456999999986665432211000 02222 22332 2345555544 2222 23578999998655
Q ss_pred CeEEeecccccc
Q 002094 820 EPKVGDFGLARL 831 (967)
Q Consensus 820 ~~kl~Dfg~a~~ 831 (967)
.+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 489999998864
No 462
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=34.83 E-value=1.9e+02 Score=33.57 Aligned_cols=45 Identities=22% Similarity=0.153 Sum_probs=31.4
Q ss_pred HHHHHHHHHHH--HHHHHHhcCCcccCCCCCCCEEeCCCCCeEEeeccccc
Q 002094 782 RQRFNIILGMA--KGLAYLHHTNIIHYNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 782 ~~~~~i~~~i~--~aL~~LH~~~ivH~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
..+..++..+| ..+.|+=. =+|=.++|||++.+|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG----lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG----VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc----CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555544 23444422 26889999999999999999999864
No 463
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.80 E-value=2e+02 Score=32.85 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=49.0
Q ss_pred eeeeeEEEcCCceeEEEEecCCCchhhhhhc----------CCCCC----CCCHHHHHHHHHHHH--HHHHHHhcCCccc
Q 002094 742 VALEGYYWTPSLQLLIYEFISSGSLYKHLHD----------GSSRN----CLSWRQRFNIILGMA--KGLAYLHHTNIIH 805 (967)
Q Consensus 742 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~----------~~~~~----~~~~~~~~~i~~~i~--~aL~~LH~~~ivH 805 (967)
++.+.+........ +.|++++.++.+.+.. ..... ...+..+..++..+| ..+.|+=.-
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 34455554444333 3577776555554432 11111 123455555555544 234455333
Q ss_pred CCCCCCCEEeCCCCCeEEeeccccc
Q 002094 806 YNLKSTNVLIDSSGEPKVGDFGLAR 830 (967)
Q Consensus 806 ~Dik~~Nill~~~~~~kl~Dfg~a~ 830 (967)
+|=.++|||++.+|++.=+|||..-
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999873
No 464
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=35.44 E-value=11 Score=25.03 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhheeec
Q 002094 612 LIAIGAAAFIAIGVIAVTVLNIRVR 636 (967)
Q Consensus 612 ii~i~~~~~~~~~~~~~~~~~~r~r 636 (967)
+.++.+.+++++..+++.++.++++
T Consensus 11 l~avlal~vi~iisLIiLi~~w~qK 35 (39)
T 2l6w_A 11 ISAILALVVLTIISLIILIMLWQKK 35 (39)
Confidence 3444444444444333333333443
No 465
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=28.17 E-value=32 Score=23.88 Aligned_cols=10 Identities=40% Similarity=0.418 Sum_probs=5.0
Q ss_pred hHHHHHHHHH
Q 002094 609 ISALIAIGAA 618 (967)
Q Consensus 609 ~~~ii~i~~~ 618 (967)
.+.++|+.+.
T Consensus 15 a~~vVGvll~ 24 (44)
T 2jwa_A 15 ISAVVGILLV 24 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455664443
No 466
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=23.33 E-value=1.1e+02 Score=23.25 Aligned_cols=11 Identities=18% Similarity=0.141 Sum_probs=4.6
Q ss_pred HHHHHhhheee
Q 002094 625 VIAVTVLNIRV 635 (967)
Q Consensus 625 ~~~~~~~~~r~ 635 (967)
++..+|.+.|.
T Consensus 30 li~gcwcylrl 40 (90)
T 1zza_A 30 LILGCWCYLRL 40 (90)
T ss_dssp HHHHHHTTTSS
T ss_pred HHHHHHHHHHH
Confidence 34444444443
No 467
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=22.92 E-value=57 Score=21.56 Aligned_cols=24 Identities=33% Similarity=0.457 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhee
Q 002094 611 ALIAIGAAAFIAIGVIAVTVLNIR 634 (967)
Q Consensus 611 ~ii~i~~~~~~~~~~~~~~~~~~r 634 (967)
+++++.+++++++++=.+.+..+|
T Consensus 7 ~ivalivalIiaIVVWtiv~ieYr 30 (36)
T 1pi7_A 7 AIVALVVAIIIAIVVWSIVIIEGR 30 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445544444444443333333333
Done!