BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002096
(967 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/978 (53%), Positives = 654/978 (66%), Gaps = 133/978 (13%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGL- 74
DY +++G L+ EQ+++Q A +LE+ELN+FRSGSAPPTV+GS+S+ GL
Sbjct: 22 DYEKEIGVLLGEQQRRQ----------VEADELERELNLFRSGSAPPTVDGSVSAAGGLF 71
Query: 75 ----------FKKLSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFT 124
F ++ G ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 72 SGGGGAPFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVA 131
Query: 125 QRLRGGGEV-GGIGDRRK--GNGSLFAVQPGFGGKEEENSGGSGGGGEWGGDGLIGLPGL 181
QRL+G V GG+GDRRK N SLF++ PGF G E +G S EW +GLIGLPGL
Sbjct: 132 QRLKGSNNVLGGVGDRRKVNDNRSLFSMPPGFEG---EKTGASAS--EWDANGLIGLPGL 186
Query: 182 GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLSSIDGL 241
GLG +QKS A+I Q DM HG PV++ PSRP SRN F++ ++S+ + L
Sbjct: 187 GLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVDSN--------------NNL 232
Query: 242 GSSANKQGMPSAQSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGVGRASS 301
SA +Q IG + +SYA+ LG+SLSR+ TPDPQ +AR PSP + G GR SS
Sbjct: 233 SPSA-------SQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGSGRMSS 285
Query: 302 MDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTD-GVADQENNSRSQNQHEIDD-RH 359
DKR S P NGV+ L +S+++V ALSGLNLS G+ D RSQ + +++ R+
Sbjct: 286 NDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDD-----RSQAEQDVEKVRN 340
Query: 360 SLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASLMADG 419
+F LQG + QH F +S+ H
Sbjct: 341 YMFGLQGGHNEVNQHEFPNKSDQAH----------------------------------- 365
Query: 420 HKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPSMMGS 479
K+ S NS L+GP NGG + +Q + + N+ LN Y++NP+ SMM +
Sbjct: 366 -KATGSLRNSQLRGPHGSAYNGGVGLANPYQQLDS-----PNYCLNNYALNPAVASMMAN 419
Query: 480 PIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGNHT-- 535
+G+ N P+Y+N SA+ +G+D+R + G N+ +E +++ R N
Sbjct: 420 QLGNNNFAPMYDNV---SALGFSGMDSRHHGRGFVSSGQNL----SESRNLGRFSNRMMG 472
Query: 536 AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDI----GNSYMDLLGLQKAYLGAL 591
G+ LQ+ ++DP+Y QY A + LNDP+MD G+SYMD+L LQ+AYLGA
Sbjct: 473 GGAGLQSHMVDPMYNQY-------ADSLDLLNDPSMDRNFMGGSSYMDMLELQRAYLGA- 524
Query: 592 LSPQKSQYGVPYLNKSGSLNNN-LYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHG 646
QKSQYGVPY KSGS N++ YG+P FG MSYPG PL +PNS + SP+R
Sbjct: 525 ---QKSQYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRD 579
Query: 647 DRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVE 706
+ NMRFPS RN SGG+MG WH +A S DE F SS+L+EFKSNKT+ FELSEIAGHVVE
Sbjct: 580 EVNMRFPSATRNYSGGLMGSWHMDA--SFDEGFGSSMLEEFKSNKTRGFELSEIAGHVVE 637
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
FS+DQYGSRFIQQKLETATT+EKNMV++EIMPQAL LMTDVFGNYVIQKFFEHG Q R
Sbjct: 638 FSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRR 697
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
ELA++L HVL LSLQMYGCRVIQKAIEVV+LDQ+ +MVKELDGH+MRCVRDQNGNHV+Q
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQ 757
Query: 827 KCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVC 886
KCIECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCHD TQS +M+EIL +V
Sbjct: 758 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVS 817
Query: 887 MLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAER 946
MLAQDQYGNYVVQHVLEHGKP ER+ IIK+L G+IVQMSQQKFASNV+EKCL+FG P ER
Sbjct: 818 MLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEER 877
Query: 947 QALVNEMLGSIEENEPLQ 964
+ LVNEMLG+ +ENEPLQ
Sbjct: 878 ELLVNEMLGTTDENEPLQ 895
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/982 (52%), Positives = 653/982 (66%), Gaps = 137/982 (13%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGLF 75
DY +++G L+ EQ+++Q A +LE+ELN++RSGSAPPTV+GS+S+ GLF
Sbjct: 22 DYEKEIGVLLGEQQRRQ----------VEADELERELNLYRSGSAPPTVDGSVSAAGGLF 71
Query: 76 KKLSDNKGGFL-------------NEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWR 122
FL ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 72 SGGGGAP--FLEFGGGNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLR 129
Query: 123 FTQRLRGGGEV-GGIGDRRKGNG--SLFAVQPGFGGKEE---ENSGGSGGGGEWGGDGLI 176
QRL+G V GG+GDRRK N SLF++ PGF +++ E S EW +GLI
Sbjct: 130 VAQRLKGSSNVLGGVGDRRKVNDSQSLFSMPPGFDQRKQHEFEVEKTSASSSEWDANGLI 189
Query: 177 GLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLS 236
GLPGLG+G +QKS A+I Q DM HG PV++ PSRP SRN F++ ++S ++LS
Sbjct: 190 GLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVDSK--------NNLS 241
Query: 237 SIDGLGSSANKQGMPSA-QSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAG 295
PSA Q IG + +SYA+ LG+SLSR+ TPDPQ +AR PSP + G
Sbjct: 242 --------------PSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIG 287
Query: 296 VGRASSMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNSRSQNQHEI 355
GR SS DKR S P NG L +S+++V ALSG+NLS G D+ R Q + ++
Sbjct: 288 SGRVSSNDKRNTSNQSPFNG---GLNESSDLVNALSGMNLSGSGGLDE----RGQAEQDV 340
Query: 356 DD-RHSLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNAS 414
+ R+ +F LQG + QH F +S+
Sbjct: 341 EKVRNYMFGLQGGHNEVNQHGFPNKSDQ-------------------------------- 368
Query: 415 LMADGHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSP 474
K+ NS L+G T N GG + +Q + + N+ LN Y +NP+
Sbjct: 369 ----AQKATGLLRNSQLRGAQGSTYNDGGGVATQYQHLDS-----PNYCLNNYGLNPAVA 419
Query: 475 SMMGSPIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLG 532
SMM + +G+ N P+YENA+AASAM +G+D+R + G N+ +E +++ R
Sbjct: 420 SMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQNL----SESRNLGRFS 475
Query: 533 NHT--AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDI---GNSYMDLLGLQKAY 587
N G+ LQ+ + DP+Y QY A + LNDP+MD+ GNSYM++L LQ+AY
Sbjct: 476 NRMMGGGTGLQSHMADPMYHQY-------ADSLDLLNDPSMDVNFMGNSYMNMLELQRAY 528
Query: 588 LGALLSPQKSQYGVPYLNKSGSLNNNL-YGNPAFGLGMSYPGGP----LLPNSPVGSGSP 642
LGA QKSQYGVPY KSGS N++ YG+P FG SYPG P LLPNS V SP
Sbjct: 529 LGA----QKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSP 579
Query: 643 VRHGDRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAG 702
+R G+ NMR+PS RN +GGVMG WH +A SLDE F SS+L+EFKSNKT+ FEL+EIAG
Sbjct: 580 MRRGEVNMRYPSATRNYAGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELAEIAG 637
Query: 703 HVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTA 762
HVVEFS+DQYGSRFIQQKLETAT++EKNMV++EIMP AL+LMTDVFGNYVIQKFFEHG
Sbjct: 638 HVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLP 697
Query: 763 SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGN 822
Q RELAD+L +VL LSLQMYGCRVIQKAIEVV+LDQ+ +MVKELDGH+MRCVRDQNGN
Sbjct: 698 PQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGN 757
Query: 823 HVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL 882
HV+QKCIECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCHD TQS +MDEI+
Sbjct: 758 HVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIM 817
Query: 883 QSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGT 942
++ MLAQDQYGNYV+QHVLEHGKP ER+ IIK+L G+IVQMSQQKFASNV+EKCL+FG
Sbjct: 818 STISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGG 877
Query: 943 PAERQALVNEMLGSIEENEPLQ 964
P ER+ LVNEMLG+ +ENEPLQ
Sbjct: 878 PEEREFLVNEMLGTTDENEPLQ 899
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
+ E+AG +V+ S ++ S +++ L EE+ + E++ ++M D F N
Sbjct: 849 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFAN 908
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
YV+QK E Q + ++ H+ L YG ++ + ++V ++ ++ L
Sbjct: 909 YVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSL 966
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/975 (51%), Positives = 640/975 (65%), Gaps = 132/975 (13%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGL- 74
DY +++G L+ EQ+++Q A +LE+ELN++RSGSAPPTV+GSLS+ GL
Sbjct: 23 DYEKEIGVLLGEQQRRQ----------VEADELERELNLYRSGSAPPTVDGSLSAAGGLF 72
Query: 75 ----------FKKLSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFT 124
F ++ G ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 73 SGGGGASFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVA 132
Query: 125 QRLRGGGEV-GGIGDRRKGNGS--LFAVQPGFGGKEEENSGGSGGGGEWGGDGLIGLPGL 181
QRL+G V GG+GDRRK N S LF++ PGF E G S EW +GLIGL
Sbjct: 133 QRLKGSNNVLGGVGDRRKVNDSRSLFSMPPGF---EAGKPGASAS--EWDANGLIGL--- 184
Query: 182 GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLSSIDGL 241
GLG +QKS A+I Q DM H PV + PSRP SRN F++ ++S+ + L
Sbjct: 185 GLGGKQKSFADIFQADMGH--PVVQQPSRPASRNTFDENVDSN--------------NNL 228
Query: 242 GSSANKQGMPSAQSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGVGRASS 301
SA +Q IG + + YA+ LG+SLSR+ TPDPQ +AR PSP + G GR SS
Sbjct: 229 SPSA-------SQGIGAPSPYCYAAVLGSSLSRNGTPDPQGIARVPSPCLTPIGSGRVSS 281
Query: 302 MDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNSRSQNQHEIDD-RHS 360
DKR S P NGV+ L +S+++V ALSGLNLS G D+ R Q + +++ R+
Sbjct: 282 NDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSGTGGLDE----RGQAEQDVEKVRNY 337
Query: 361 LFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASLMADGH 420
+F LQ + H F RS+ + +GS + SG G+
Sbjct: 338 MFGLQDGHNEVNPHGFPNRSDQARGTASCRNSQMRGSQGSAYNSGSGV------------ 385
Query: 421 KSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPSMMGSP 480
+N Y HH S N Y++NP+ SMM +
Sbjct: 386 ------ANPY----------------QHHD------------SPNYYALNPAVASMMANQ 411
Query: 481 IGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGNHT--A 536
+G+ N P+YENA+A + + +D+R + G N+ +E +++ R+GN
Sbjct: 412 LGTNNYSPMYENASAT--LGYSAMDSRLHGGSFVSSGQNL----SESRNIGRVGNRMMEG 465
Query: 537 GSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMD--IGNSYMDLLGLQKAYLGALLSP 594
G+ + L DP+Y QY R +E A + LNDP+MD GNSYM++L +Q+AYLG+
Sbjct: 466 GTGHPSHLADPMYHQYARFSENADS-FDLLNDPSMDRNYGNSYMNMLEIQRAYLGS---- 520
Query: 595 QKSQYGVPYLNKSGSLNNN-LYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHGDRN 649
QKSQYG+PY KSGS N++ YG+P FG MSYPG PL +PNS + SP+R G+ N
Sbjct: 521 QKSQYGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVN 578
Query: 650 MRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSA 709
MR+P+ RN +GGVMG WH +A SLDE F SS+L+EFKSNKT+ FELSEIAGHVVEFS+
Sbjct: 579 MRYPAATRNYTGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSS 636
Query: 710 DQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELA 769
DQYGSRFIQQKLETATT+EKNMV++EIMP+AL+LMTDVFGNYVIQKFFEHG Q REL
Sbjct: 637 DQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRRELG 696
Query: 770 DQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCI 829
++L +VL LSLQMYGCRVIQKAIEVV+LDQ+ QMVKELDGH+MRCVRDQNGNHV+QKCI
Sbjct: 697 EKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCI 756
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
ECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCH+ TQS +M+EIL +V ML
Sbjct: 757 ECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLT 816
Query: 890 QDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQAL 949
QDQYGNYVVQHVLEHGKP ER+ IIK+L G+IVQMSQQKFASNV+EKCL+FG P ER+ L
Sbjct: 817 QDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELL 876
Query: 950 VNEMLGSIEENEPLQ 964
VNEMLG+ +ENEPLQ
Sbjct: 877 VNEMLGTTDENEPLQ 891
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 625 bits (1613), Expect = e-178, Method: Compositional matrix adjust.
Identities = 403/985 (40%), Positives = 557/985 (56%), Gaps = 128/985 (12%)
Query: 26 REQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGLFKK-------- 77
R Q++ + L + + + + E+++++ RSGSAPPTVEG L ++D +
Sbjct: 27 RFQRELESLLQQHRNQQSFGRERERDIDVHRSGSAPPTVEGLLRAMDNQYLNNNNSDHRD 86
Query: 78 -------LSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFTQRLRGG 130
+ N L+++ELR P Y++YYYSN + NPRLPPPLLS+EDWR QR
Sbjct: 87 VGNISSITTSNGVELLSDDELRWHPEYLSYYYSNEHSNPRLPPPLLSREDWRVAQRFHNS 146
Query: 131 GEVGG-IGDRRK------GNGSLFAVQPGFGGKEEENS-----GGSGGGG-------EWG 171
V +G+ RK + SLF+VQPG ++ EN G + G
Sbjct: 147 ESVFDPVGEWRKKTVEVDNSSSLFSVQPGVPVEQAENDLMELRNAVAQGRSQKVQRLDQG 206
Query: 172 GDGLIGLPGL-GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAH 230
+ LIGL G GLG R+KS A+I+Q+ + A + SRP S N F D
Sbjct: 207 REDLIGLSGYSGLGPRRKSFADILQEGLERDAALGSQLSRPASCNTFRDM---------- 256
Query: 231 LHHDLSSIDGLGSSANKQGMPSAQSIGTSASHSYASALGASLS----RSTTPDPQLMARA 286
D + + + + S+ ++A +S + LG+++S R+ TPD L+ R+
Sbjct: 257 --KDAAVLSNFSAGGFDSPLAFHDSLHSTAKNSPNTMLGSTMSSPVPRNRTPDSHLVGRS 314
Query: 287 PSPRIPTAGVGRASSMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENN 346
+ +P G R ++K+ G N S + +A++ LS LN+S +EN+
Sbjct: 315 TASGLPPIGT-RVGPVEKKNTFGTAIQNCESYT---AADVADTLSRLNMSEMSQV-KENH 369
Query: 347 SRSQNQHEIDDRHSLFNL--QGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKS 404
+SQ Q E++++ + G + ++Q +E+ L + G ++G S
Sbjct: 370 MQSQLQVELENQSDVMRYIPNGHKKALRQQ---NTAETKDHLFSANYGGMSGYGASLGAS 426
Query: 405 GVGIDMNNASLMADGHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSL 464
VG S+ + P + + S S H +G++ S+ ++
Sbjct: 427 TVG-------------------SHGQVNIPKRTSSSASLYSTSDHSRLGSV--GLSDVNI 465
Query: 465 NGYSMNPSSPSMMGSPIGSGNLPPLYEN-AAAASAMAGNGLDARTLASLGLGPNVMAAAA 523
++N + S G + L L E+ +A S + G+G
Sbjct: 466 RNGNINGTDFSTAGGYMAKNKLNSLAEHYSAEGSHLTGDG-------------------- 505
Query: 524 ELQSMNRLGNHTAGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDIGNSYMDLLG- 582
+ QS+NRL N A S L +P+MDP Y QYL + AA + D ++ I N++ G
Sbjct: 506 DRQSLNRLINQVA-SELHSPVMDPHYSQYLHTASSTAAPI----DHSL-IRNNFGTSNGD 559
Query: 583 LQKAYLGALLSPQKSQYGVPYLNKSGSLNNNLYGNPAFGLGMSYPGGPLLPNSPVGSGSP 642
YL LL+ + Q G LN + N+ + +P++ LG Y G L S S
Sbjct: 560 TANEYLAMLLAQNRQQLG--NLNAA---NSRFFESPSYDLGNMYLGNHL------PSPSK 608
Query: 643 VRHGDRNMRF---PSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSE 699
+NMR S M+ GG+ G H + G + + +SLL+ FK+NKT+ ELSE
Sbjct: 609 NSRNFQNMRMSQSASMMKVPFGGLQGSSHVDIGSTAE----ASLLEGFKNNKTRSLELSE 664
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I GHV+EFS DQYGSRFIQQKLETAT EEKN +F EI+P +LMTDVFGNYVIQKFFEH
Sbjct: 665 IVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEH 724
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQ 819
GT Q +ELA+Q+TGHVL LSLQMYGCRVIQKA+EVVEL+QQ +MVKELDG +M+CV DQ
Sbjct: 725 GTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQ 784
Query: 820 NGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD 879
NGNHVIQKCIE +P+D IQFI+ +FY +V+ LSTHPYGCRVIQRVLEH D +TQ I+M+
Sbjct: 785 NGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIME 844
Query: 880 EILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLS 939
EI+ SVC LAQDQYGNYV+QH+++HGKPHERS II KL GQIV+MSQQKFASNV+EKCL+
Sbjct: 845 EIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLT 904
Query: 940 FGTPAERQALVNEMLGSIEENEPLQ 964
FG P ERQ LVNEMLG +ENEPLQ
Sbjct: 905 FGGPEERQVLVNEMLGYTDENEPLQ 929
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
++++AG +V+ S ++ S +++ L EE+ ++ E++ ++M D FGN
Sbjct: 879 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 938
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVV 796
YV+QK E + + ++ H+ L YG ++ + +++
Sbjct: 939 YVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLI 984
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/432 (50%), Positives = 276/432 (63%), Gaps = 21/432 (4%)
Query: 544 LMDPLYLQYLRSNEYAAAQVASLNDPAMDIGNSYMDLLGLQKAYLG---ALLSPQKSQYG 600
L+DP LQY + AQV + P +S+ Y+ L SP YG
Sbjct: 470 LVDPFQLQY-----FQQAQVDAYAPPFQSSTDSFGQKDQQAVGYMANHEPLNSPLSPGYG 524
Query: 601 VPYLNKSGSLNNNLYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHGDRN-MRF-PS 654
L + N P + YPG PL +P+SPVG G G R+ R+
Sbjct: 525 ---LQSPRHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVG-GMMSHFGRRSETRYHQQ 580
Query: 655 GMRNLSGGVMGPWHSEAGGS---LDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQ 711
G +G G W GG+ +D+ S LDE KS + ELS+IAG VVEFS DQ
Sbjct: 581 GPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQ 640
Query: 712 YGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQ 771
+GSRFIQQKLE + EEK VF E++PQA LMTDVFGNYVIQKF EHGT +Q EL Q
Sbjct: 641 HGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQ 700
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
L G +++LSLQMYGCRVIQKA+EV+++DQ+T++++ELDG++++CVRDQNGNHVIQKCIE
Sbjct: 701 LAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIES 760
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQD 891
+P I F++ F QV TLSTHPYGCRVIQR+LEHC D++ ++DEIL+S LA D
Sbjct: 761 MPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHD 820
Query: 892 QYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVN 951
QYGNYV QHVLE GKP ER II+KLTG +VQMSQ K+ASNV+EKCL ER+ L+
Sbjct: 821 QYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIE 880
Query: 952 EMLGSIEENEPL 963
E++G EE+ L
Sbjct: 881 EIMGKSEEDNHL 892
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 11/277 (3%)
Query: 670 EAGGSLDESFASSLLDEFKSNKTKCFE---LSEIAGHVVEFSADQYGSRFIQQKLETATT 726
+A + + F + ++ +F + T + ++AG +V S YG R IQ+ LE
Sbjct: 668 QASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDV 727
Query: 727 EEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGC 786
++K + +E+ L + D GN+VIQK E A ++ + G V TLS YGC
Sbjct: 728 DQKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGC 787
Query: 787 RVIQKAIEVVELDQQTQ-MVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFY 845
RVIQ+ +E D++T ++ E+ DQ GN+V Q +E D + I+
Sbjct: 788 RVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLT 847
Query: 846 DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL------QSVCMLAQDQYGNYVVQ 899
VV +S H Y V+++ LEH D + +++EI+ + + +DQ+ NYVVQ
Sbjct: 848 GNVVQMSQHKYASNVVEKCLEHA-DSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQ 906
Query: 900 HVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
VLE K +R +++++ + + + + +++ +
Sbjct: 907 KVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVAR 943
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 56 RSGSAPPTVEGSLSSIDGLFKK--------LSDNKGGFLNEEELRADPAYVNYYYSNVNL 107
RS SAPP++EGS +++ L K+ LS + +EEE+R+DPAYV YY SN+NL
Sbjct: 59 RSESAPPSMEGSFAALRNLLKQQEGSSSEVLSRAIENYDSEEEIRSDPAYVAYYLSNINL 118
Query: 108 NPRLPPPLLSKEDWRFTQRLRGGGEVGGIGDRRKG-NGSLFAVQPGFGGKEEENSGGSGG 166
NPRLPPPL+S+E+ + + G SL + + EE +
Sbjct: 119 NPRLPPPLISRENQHLLRHFGDNNQSPTTSWDNMGIRSSLHSSRTALSTHREEPEDEASS 178
Query: 167 GGEWGGDGLIGLPGLGLGSRQKSIAEIIQDDM 198
G + L G R+KSIA++IQ+D
Sbjct: 179 GEQQSYASLAG--------RRKSIADMIQEDF 202
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 170/277 (61%), Positives = 213/277 (76%)
Query: 682 SLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQAL 741
+ L+E KS K + F+LS+I GH+VEFSADQ+GSRFIQQKLE EEK VF+EI+P A
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 742 SLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQ 801
LMTDVFGNYVIQKFFE+G ++Q +ELADQL G ++ LSLQMYGCRVIQKA++V+E DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
++ +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 862 QRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQI 921
QR+LE C + + +EIL+SVC+L++DQYGNYV QHVLE G ER I +KL+G I
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 922 VQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE 958
VQ+S KFASNVIEKCL +G ER ++ E+ G E
Sbjct: 755 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDE 791
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEI------MPQALSLMTDVFGNYV 752
+++GH+V+ S ++ S I++ LE E++++ +EI L +M D +GNYV
Sbjct: 749 KLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYV 808
Query: 753 IQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQK 791
+QK FE TA Q L ++ H L YG ++ +
Sbjct: 809 VQKIFETCTADQRLTLFSRVRMHASALKKYTYGKHIVSR 847
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 357 bits (916), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 162/275 (58%), Positives = 213/275 (77%), Gaps = 3/275 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L ++ GH+VEFS DQ+GSRFIQQKLE AT E+ MVF EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 767
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LMTDVFGNYVIQKFFE G+ Q LA ++ GHVL L+LQMYGCRVIQKA+E + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 801 Q--TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q ++MVKELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 888 RVIQRILEHCTAEQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 946
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
G+++ +SQ KFASNV+EKC++ + AER L++E+
Sbjct: 947 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEV 981
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE T E+ + +E+ L+ D +GNYVIQ
Sbjct: 868 FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQ 927
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G VL LS + V++K + ++ ++ E+ DG
Sbjct: 928 HVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDG 987
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + I+ + TL + YG ++ ++ ++
Sbjct: 988 PHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKY 1047
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R+LE + + ++ + +++ + +QDQ+G+ +Q LE P ER + ++
Sbjct: 709 RLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAY 768
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
Q+ F + VI+K FG+ ++ AL + G +
Sbjct: 769 QLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHV 803
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 356 bits (914), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 161/275 (58%), Positives = 213/275 (77%), Gaps = 3/275 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L ++ GH+VEFS DQ+GSRFIQQKLE AT E+ +VF EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAA 767
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LMTDVFGNYVIQKFFE G+ Q LA ++ GHVL L+LQMYGCRVIQKA+E + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 801 Q--TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q ++MVKELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 888 RVIQRILEHCTAEQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 946
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
G+++ +SQ KFASNV+EKC++ + AER L++E+
Sbjct: 947 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEV 981
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE T E+ + +E+ L+ D +GNYVIQ
Sbjct: 868 FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQ 927
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G VL LS + V++K + ++ ++ E+ DG
Sbjct: 928 HVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDG 987
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + I+ + TL + YG ++ ++ ++
Sbjct: 988 PHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKY 1047
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R+LE + + ++ + +++ + +QDQ+G+ +Q LE P ER + ++
Sbjct: 709 RLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAY 768
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
Q+ F + VI+K FG+ ++ AL + G +
Sbjct: 769 QLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHV 803
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 356 bits (913), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 162/273 (59%), Positives = 208/273 (76%), Gaps = 1/273 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++ + +L ++A H+VEFS DQ+GSRFIQQKLE AT EK MVF EI+ A
Sbjct: 1093 SRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAA 1152
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
SLMTDVFGNYVIQKFFE GT Q L Q+ GHVL L+LQMYGCRVIQKA+E + +Q
Sbjct: 1153 YSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQ 1212
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q ++V ELDGH+++CV+DQNGNHV+QKCIECV A+QFI+ F QV +LSTHPYGCRV
Sbjct: 1213 QQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRV 1272
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 920
IQR+LEHC E+T I +DE+ + L QDQYGNYV+QHVLEHGK ++S +I + G+
Sbjct: 1273 IQRILEHCTAEQTTPI-LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGK 1331
Query: 921 IVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
++ +SQ KFASNV+EKC++ T ER L++E+
Sbjct: 1332 VLVLSQHKFASNVVEKCVTHATRGERTGLIDEV 1364
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 805 VKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+++L HI+ +DQ+G+ IQ+ +E Q + +L T +G VIQ+
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 865 LEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
E E+ ++ M ++ V LA YG V+Q LE P ++ I+ +L G +++
Sbjct: 1169 FEFGTPEQKNTLGM-QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKC 1227
Query: 925 SQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
+ + ++V++KC+ P Q ++N G +
Sbjct: 1228 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQV 1260
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%)
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R+LE +++ ++ + ++ + +QDQ+G+ +Q LE E+ + ++
Sbjct: 1094 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 1153
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
+ F + VI+K FGTP ++ L ++ G +
Sbjct: 1154 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHV 1188
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMP---QALS 742
E + K ++ + G V+ S ++ S +++ + AT E+ + E+ AL
Sbjct: 1314 EHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALH 1373
Query: 743 -LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQK 791
+M D + NYV+QK + +Q+++L ++ H+ L YG + K
Sbjct: 1374 VMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAK 1423
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 355 bits (912), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 211/273 (77%), Gaps = 1/273 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 920
IQR+LEHC ++T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++ G
Sbjct: 1010 IQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1068
Query: 921 IVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
++ +SQ KFASNV+EKC++ + ER L++E+
Sbjct: 1069 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEV 1101
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE ++ + +E+ L+ D +GNYVIQ
Sbjct: 988 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 1047
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1048 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDG 1107
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1108 PHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1167
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 848 VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKP 907
++ S +G R IQ LE + Q ++ +EILQ+ L D +GNYV+Q E G
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQ-LVFNEILQAAYQLMVDVFGNYVIQKFFEFGSL 911
Query: 908 HERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
++ A+ +++ G ++ ++ Q + VI+K L F ++ +V E+ G +
Sbjct: 912 EQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHV 961
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R+LE + + ++ + EI + +QDQ+G+ +Q LE P ER + ++
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
Q+ F + VI+K FG+ ++ AL + G +
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHV 925
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 355 bits (912), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 211/273 (77%), Gaps = 1/273 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 920
IQR+LEHC ++T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++ G
Sbjct: 1010 IQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1068
Query: 921 IVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
++ +SQ KFASNV+EKC++ + ER L++E+
Sbjct: 1069 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEV 1101
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE ++ + +E+ L+ D +GNYVIQ
Sbjct: 988 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 1047
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1048 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDG 1107
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1108 PHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1167
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 848 VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKP 907
++ S +G R IQ LE + Q ++ +EILQ+ L D +GNYV+Q E G
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQ-LVFNEILQAAYQLMVDVFGNYVIQKFFEFGSL 911
Query: 908 HERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
++ A+ +++ G ++ ++ Q + VI+K L F ++ +V E+ G +
Sbjct: 912 EQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHV 961
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R+LE + + ++ + EI + +QDQ+G+ +Q LE P ER + ++
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
Q+ F + VI+K FG+ ++ AL + G +
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHV 925
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 352 bits (902), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 159/275 (57%), Positives = 211/275 (76%), Gaps = 3/275 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 890
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQ 950
Query: 801 QT--QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 1011 RVIQRILEHCLPEQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
G ++ +SQ KFASNV+EKC++ + ER L++E+
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEV 1104
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE E+ + +E+ L+ D +GNYVIQ
Sbjct: 991 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQ 1050
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1051 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDG 1110
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1111 PHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1170
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R+LE + + ++ + EI + +QDQ+G+ +Q LE P ER + ++
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 891
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
Q+ F + VI+K FG+ ++ AL + G +
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHV 926
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 351 bits (900), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 158/275 (57%), Positives = 211/275 (76%), Gaps = 3/275 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAA 890
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 950
Query: 801 QT--QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RVIQR+LEHC ++T I ++E+ Q L QDQYGNYV+QHVLEHG+P ++S I+ ++
Sbjct: 1011 RVIQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 919 GQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
G ++ +SQ KFASNV+EKC++ + ER L++E+
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV 1104
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE ++ + +E+ L+ D +GNYVIQ
Sbjct: 991 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 1050
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1051 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDG 1110
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1111 PHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1170
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 313 bits (803), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 145/281 (51%), Positives = 197/281 (70%), Gaps = 3/281 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIM-PQ 739
S +L F +NK + FELS+I G+VV FS DQ+GSRFIQQKL TAT EE+ VFQEI
Sbjct: 378 SRVLYLFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTS 437
Query: 740 ALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELD 799
L LM D+FGNYV+QK+FE G Q + L Q+ GHV +LSLQMYGCRV+QKAIE + +
Sbjct: 438 CLQLMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPE 497
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR 859
Q Q+++ELDGH++ CV DQNGNHVIQK IEC+ +QFI+ Q+ LS HPYGCR
Sbjct: 498 HQVQLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCR 557
Query: 860 VIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTG 919
VIQR +EHCH E+ ++++E+L + L QDQYGNYVVQH+L G ++ I +
Sbjct: 558 VIQRAIEHCHSER--KLIIEELLPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMID 615
Query: 920 QIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEEN 960
++ +S KFASNV+E+C+S+ + +R+ ++N+++ EN
Sbjct: 616 HLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAEN 656
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F L + + SA YG R IQ+ +E +E K ++ +E++P L L D +GNYV+Q
Sbjct: 537 FILRALRPQIHVLSAHPYGCRVIQRAIEHCHSERK-LIIEELLPHILKLTQDQYGNYVVQ 595
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVV-ELDQQTQMVKELDGHIM 813
G+ S + + D + H+L LS + V+++ I + ++D++ + K +
Sbjct: 596 HILRTGSESDKKYIFDLMIDHLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAE 655
Query: 814 RC------VRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
C ++D+ N+VIQK ++ PE+ ++ Y + L YG +I V
Sbjct: 656 NCSILMLMMKDKYANYVIQKLLDASPEEERDLLISYIYPHISVLKKFTYGKHLIMSV 712
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 252 bits (644), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 176/264 (66%), Gaps = 7/264 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
L +I GH +EF DQ+GSRFIQ++L T+ EK ++F EI A+ L DVFGNYVIQKF
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 757 FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCV 816
FE G+ Q L DQ G++ LSLQMY CRVIQKA+E ++ +Q+ ++V EL +++ +
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMI 655
Query: 817 RDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSI 876
+DQNGNHVIQK IE +P + + FI+ + + LSTH YGCRVIQR+LE E +SI
Sbjct: 656 KDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESI 715
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERS------AIIKKLTGQIVQMSQQKFA 930
++E+ + L QDQYGNYV+Q+VL+ + + II+ + +V+ S+ KFA
Sbjct: 716 -LNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFA 774
Query: 931 SNVIEKCLSFGTPAERQALVNEML 954
SNV+EK + +G+ ++ +++++L
Sbjct: 775 SNVVEKSILYGSKNQKDLIISKIL 798
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 26/239 (10%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMT 745
EF S K + + G++ + S Y R IQ+ LE + ++ + E+ L ++
Sbjct: 597 EFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIK 656
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D GN+VIQK E ++ + LTGH+ LS YGCRVIQ+ +E + Q ++
Sbjct: 657 DQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESIL 716
Query: 806 KELDGHIMRCVRDQNGNHVIQKCI--------ECVPEDAIQFIVLTFYDQVVTLSTHPYG 857
EL I ++DQ GN+VIQ + E V D Q I+ T + VV S H +
Sbjct: 717 NELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMV--DIKQEIIETVANNVVEYSKHKFA 774
Query: 858 CRVIQR-VLEHCHDEKTQSIMMDEIL-------------QSVCMLAQDQYGNYVVQHVL 902
V+++ +L ++K +++ +IL + ++ +DQ+ NYV+Q ++
Sbjct: 775 SNVVEKSILYGSKNQK--DLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQKLV 831
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F LS + GH+ S YG R IQ+ LE ++E++ + E+ L+ D +GNYVIQ
Sbjct: 678 FILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQ 737
Query: 755 ------KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-------------EV 795
+F +E+ + + +V+ S + V++K+I ++
Sbjct: 738 YVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFASNVVEKSILYGSKNQKDLIISKI 797
Query: 796 VELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVL 842
+ D+ + E D ++ ++DQ N+VIQK + + + IV+
Sbjct: 798 LPRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVSEGEGKKLIVI 844
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 856 YGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIK 915
+G R IQR L + ++ +EI L+ D +GNYV+Q E G +++ ++
Sbjct: 551 HGSRFIQRELA-TSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVD 609
Query: 916 KLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
+ G + Q+S Q +A VI+K L + +R LV E+ S+
Sbjct: 610 QFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSV 651
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 41/82 (50%)
Query: 878 MDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKC 937
+ +I +DQ+G+ +Q L E+ I ++ +++S F + VI+K
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 938 LSFGTPAERQALVNEMLGSIEE 959
FG+ ++ LV++ G++++
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQ 617
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 145/254 (57%), Gaps = 2/254 (0%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
+++ F DQ+G R++Q+ LE + VF E P LM D FGNY+ QK FEH +
Sbjct: 346 SNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHAS 405
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVEL-DQQTQMVKELDGHIMRCVRDQN 820
+Q + ++ +S M+G R +QK I++V DQ + +V L +++ +D N
Sbjct: 406 EAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDLN 465
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
GNHVIQKC+ ++ QFI + + +STH +GC V+QR +H + + +++
Sbjct: 466 GNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQ-LVEH 524
Query: 881 ILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSF 940
I+ L QD +GNYV+Q+VLE P+ AII ++ +S QKF+SNV+EKC+ F
Sbjct: 525 IVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFF 584
Query: 941 GTPAERQALVNEML 954
A ++ L++E++
Sbjct: 585 APAAIKEKLISELM 598
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 145/312 (46%), Gaps = 11/312 (3%)
Query: 634 NSPVGSGSPVRHGDRNMRFPSGMRNLS--GGVMGPWHSEAGGSLDESFASSL---LDEFK 688
NS + S +HG R ++ +N S V H + ++F + L L E
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 689 SNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDV 747
S + + IA +V S + +G+R +Q+ ++ ++ ++ + + + P + L D+
Sbjct: 405 SEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDL 464
Query: 748 FGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE 807
GN+VIQK + + + D + L +S +GC V+Q+ + Q Q+V+
Sbjct: 465 NGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLVEH 524
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ H + V+D GN+V+Q +E + + I+ F +V LST + V+++ +
Sbjct: 525 IVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFF 584
Query: 868 CH---DEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
EK S +MDE + + L +D + NYV+Q L++ +R+ +++++ I +
Sbjct: 585 APAAIKEKLISELMDE--KHLPKLLRDSFANYVIQTALDNASVKQRAELVERIKPLIPSI 642
Query: 925 SQQKFASNVIEK 936
++ K
Sbjct: 643 KNTPCGRRILSK 654
>sp|P25339|PUF4_YEAST Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2
Length = 888
Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 156/288 (54%), Gaps = 21/288 (7%)
Query: 669 SEAGGSLDES--FASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATT 726
+E ++ES FA ++LD++ G + DQ+G RF+Q++L+ +
Sbjct: 544 AEKQRKIEESSRFADAVLDQY-------------IGSIHSLCKDQHGCRFLQKQLDILGS 590
Query: 727 EEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGC 786
+ + +F+E + LMTD FGNY+IQK E T Q L + H + +SL +G
Sbjct: 591 KAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGT 650
Query: 787 RVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFY 845
R +QK IE ++ D++ Q+V + L + ++ +D NGNHVIQKC++ + + QFI
Sbjct: 651 RALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIS 710
Query: 846 DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVL--- 902
D + ++TH +GC V+QR L+H E+ + + D++L V L D +GNYVVQ+++
Sbjct: 711 DSCIDIATHRHGCCVLQRCLDHGTTEQCDN-LCDKLLALVDKLTLDPFGNYVVQYIITKE 769
Query: 903 -EHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQAL 949
E K I+ L + +++S KF SNVIEK L +E L
Sbjct: 770 AEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMIL 817
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 768 LADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQK 827
+ DQ G + +L +GCR +QK ++++ + +E + + + D GN++IQK
Sbjct: 560 VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQK 619
Query: 828 CIECVPEDAIQFIVLTFYD--QVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSV 885
+E V + Q IVLT V +S +P+G R +Q+++E ++ I++D +
Sbjct: 620 LLEEVTTE--QRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYT 677
Query: 886 CMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAE 945
L++D GN+V+Q L+ KP I ++ + ++ + V+++CL GT +
Sbjct: 678 VQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQ 737
Query: 946 RQALVNEMLGSIEE 959
L +++L +++
Sbjct: 738 CDNLCDKLLALVDK 751
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 24/264 (9%)
Query: 675 LDESFASSLLDEFKSNKT--KCFELSEIAG-HVVEFSADQYGSRFIQQKLETATT-EEKN 730
+ +SF + L+ + T + L++I+ H VE S + +G+R +Q+ +E T EE
Sbjct: 608 MTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQ 667
Query: 731 MVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQ 790
+V + P + L D+ GN+VIQK + + + D ++ + ++ +GC V+Q
Sbjct: 668 IVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQ 727
Query: 791 KAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPE----DAIQFIVLTFYD 846
+ ++ +Q + +L + + D GN+V+Q I E D IV
Sbjct: 728 RCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKP 787
Query: 847 QVVTLSTHPYGCRVIQRVLEHCHDEKTQSI---MMDEILQS-----VCMLAQDQYGNYVV 898
+ + LS H +G VI+++L KT + M+ EIL + + L D YGNYV+
Sbjct: 788 RAIELSIHKFGSNVIEKIL------KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVL 841
Query: 899 QHVLEHGKPHERSAIIKKLTGQIV 922
Q L+ H+++ + K +IV
Sbjct: 842 QTALDIS--HKQNDYLYKRLSEIV 863
>sp|Q9LM20|PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana
GN=APUM8 PE=3 SV=2
Length = 515
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 154/263 (58%), Gaps = 6/263 (2%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQK 755
++SE G+V + DQ+G RF+Q E + + ++F E++P + LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 756 FFEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGH 811
+ Q ++ +T G ++ +SL YG RV+Q+ +E ++ +Q +VK L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 812 IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +RD NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+ + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGL 374
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
+ + ++ EI ++ LAQD YGNY VQ VLE +A++ +L G V++S QKF+S
Sbjct: 375 QREK-LVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 932 NVIEKCLSFGTPAERQALVNEML 954
+++E+CL+ P R +V E++
Sbjct: 434 HMVERCLT-HCPESRPQIVRELI 455
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHG 760
G ++ S + YG+R +Q+ +E+ T ++ ++V + P L+L+ D+ GN+VIQ+ +
Sbjct: 276 GQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCL 335
Query: 761 TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
+ + + T + ++ +GC V+QK I Q+ ++V E+ + + +D
Sbjct: 336 STEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPY 395
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
GN+ +Q +E AI ++ V LS + +++R L HC + + Q +
Sbjct: 396 GNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELI 455
Query: 881 ILQSVCMLAQDQYGNYVVQHVL 902
+ +L QD Y N+V+Q L
Sbjct: 456 SVPHFDILIQDPYANFVIQAAL 477
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 683 LLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALS 742
L++ K+ K S + + D G+ IQ+ L+ +TE+ +F++ +
Sbjct: 294 LVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCID 353
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
+ T G V+QK + + Q +L +++ + L L+ YG +Q +E+ +
Sbjct: 354 IATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIA 413
Query: 803 QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIV-LTFYDQVVTLSTHPYGCRVI 861
M+ +L GH + + +H++++C+ PE Q + L L PY VI
Sbjct: 414 AMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVI 473
Query: 862 QRVL 865
Q L
Sbjct: 474 QAAL 477
>sp|Q9C9R6|PUM7_ARATH Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
GN=APUM7 PE=3 SV=2
Length = 650
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 159/272 (58%), Gaps = 6/272 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+ +I G+V + DQ+G RF+Q+ + T+ + ++F E++ + LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 757 FEHGTA---SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVK-ELDGHI 812
+ T +Q+ +A + G ++ +SL YG RV+Q+ +E + +Q +VK L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ ++D NGNHVIQ+C++C+ + +FI ++TH +GC V+Q+ + + ++
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQ 510
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
+ ++ EI ++ +LAQD +GNY VQ V+E P + ++ +L G VQ+S QKF+S+
Sbjct: 511 REKLIA-EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 933 VIEKCLSFGTPAERQALVNEMLGSIEENEPLQ 964
++E+CL P R +V E++ ++ LQ
Sbjct: 570 MVERCL-MHCPESRPQIVRELVSVPHFDQLLQ 600
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 698 SEIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+E G ++ S + YG+R +Q+ +ET + ++ ++V + P L L+ D+ GN+VIQ+
Sbjct: 407 TEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRC 466
Query: 757 FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCV 816
+ + + + D T ++ +GC V+QK I Q+ +++ E+ + +
Sbjct: 467 LQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLA 526
Query: 817 RDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSI 876
+D GN+ +Q IE A+ ++ V LS + +++R L HC + + Q +
Sbjct: 527 QDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQIV 586
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGK 906
+ L QD Y N+V+Q L K
Sbjct: 587 RELVSVPHFDQLLQDPYANFVIQAALAATK 616
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 145/255 (56%), Gaps = 2/255 (0%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
GH+ DQYG R++Q+ L+ ++ F EI + LM D FGNY+ QK F + +
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV-KELDGHIMRCVRDQN 820
Q + + + ++ + +YG R +Q I+ + ++Q ++ K + + D N
Sbjct: 525 REQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNN 584
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
G HV+QKCI P + ++ + L+ + ++TL+T+ +GC ++QR L+ + + Q +++
Sbjct: 585 GTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGD-IQERLVNS 643
Query: 881 ILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSF 940
I++S +L Q+ YGNY+VQHVLE II+K G I ++S QKF+SN IE+C+
Sbjct: 644 IIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRT 703
Query: 941 GTPAERQALVNEMLG 955
+P+ R+ ++ E L
Sbjct: 704 ASPSTREQMLQEFLS 718
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/219 (16%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 682 SLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQAL 741
+++D+ SN+ L I + + D G+ +Q+ + E+ +F + +
Sbjct: 554 NIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLI 613
Query: 742 SLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQ 801
+L T+ G ++Q+ + L + + L L YG ++Q +E+
Sbjct: 614 TLATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYT 673
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTF--YDQVVTLSTHPYGCR 859
+++++ G+I + + ++ I++CI + ++ F + + L Y
Sbjct: 674 ERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFLSFPNIEQLLDDCYANY 733
Query: 860 VIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVV 898
V+QR L + DE + +++ I + + ++G +++
Sbjct: 734 VMQRFL-NVADESQKFLILRSISHVIPKIQNTRHGRHIL 771
>sp|P39016|MPT5_YEAST Suppressor protein MPT5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MPT5 PE=1 SV=2
Length = 859
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 146/249 (58%), Gaps = 18/249 (7%)
Query: 705 VEFSADQYGSRFIQQKLETATTEEKNMV----FQEIMPQALSLMTDVFGNYVIQKFFEHG 760
++ + DQ+G RF+Q+KLET + E NMV +++I P L L+ D FGNY++QK ++
Sbjct: 216 IKLATDQFGCRFLQKKLETPS--ESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYL 273
Query: 761 TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV-----KELDG--HIM 813
TA Q L + +V +S+ YG R +QK I+ V+ + Q ++ +E ++
Sbjct: 274 TAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVV 333
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQ--VVTLSTHPYGCRVIQRVLEHCHDE 871
+ D NGNHVIQKCI FI+ +Q ++T+STH +GC V+Q++L C +
Sbjct: 334 TLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTLQ 393
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKP--HERSAIIKKLTGQIVQMSQQKF 929
+ I + +I+Q + L DQ+GNY++Q +L+ + + + + +L+ ++ Q+S KF
Sbjct: 394 QIFKISV-KIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCLKF 452
Query: 930 ASNVIEKCL 938
+SNV+EK +
Sbjct: 453 SSNVVEKFI 461
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 121/262 (46%), Gaps = 45/262 (17%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTE-EKNMVF----QEI-- 736
L ++ + + K + I +V + S +QYG+R +Q+ ++T E + +++ QE
Sbjct: 269 LCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTS 328
Query: 737 MPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT--GHVLTLSLQMYGCRVIQKAIE 794
+ Q ++L+ D+ GN+VIQK + S+ + D + +++T+S +GC V+QK +
Sbjct: 329 IEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLS 388
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLT-----FYDQVV 849
V L Q ++ ++ + + DQ GN++IQ ++ D F +L +++
Sbjct: 389 VCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELD---FYLLAELFNRLSNELC 445
Query: 850 TLSTHPYGCRVIQRVLEHCHDEKTQSIM----------------------------MDEI 881
LS + V+++ ++ T I+ +D
Sbjct: 446 QLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIF 505
Query: 882 LQSVCMLAQDQYGNYVVQHVLE 903
++ +L +D +GNY +Q +L+
Sbjct: 506 TVNLNVLIRDNFGNYALQTLLD 527
>sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2
Length = 596
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 142/263 (53%), Gaps = 5/263 (1%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
++E G + + DQ+G RF+Q+ + M+F EI+ LM D FGNY++QK
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKL 334
Query: 757 FEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-I 812
E Q ++ +T G ++ +S M+G R +QK +E + +++ ++ H I
Sbjct: 335 LEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGI 394
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ +++ NGNHV+Q+C++ + +F+ V L+T +GC V+Q+ L + E+
Sbjct: 395 VHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
Q ++ EI + +L+QD +GNYV+Q+V E I+++L G ++S QK +SN
Sbjct: 455 KQH-LVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 513
Query: 933 VIEKCLSFGTPAERQALVNEMLG 955
V+EKCL R ++ E++
Sbjct: 514 VVEKCLKLADDKHRARIIRELIN 536
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F H VE + D++G +Q+ L + E+K + EI AL L D FGNYV+Q
Sbjct: 421 FLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQ 480
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL--DGHI 812
FE E+ +QL G+ LS+Q V++K +++ + + ++++EL G +
Sbjct: 481 YVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRL 540
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
+ + D GN+VIQ ++ + +V + +L T+PYG +V+
Sbjct: 541 DQVMLDPYGNYVIQAALKQSKGNVHALLVDAIKLNISSLRTNPYGKKVL 589
>sp|Q9LDW3|PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2
Length = 556
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 156/282 (55%), Gaps = 11/282 (3%)
Query: 690 NKTKCFELSEIA---GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTD 746
NK +L+ + G V + DQ G R +Q+ ++ + ++F+E++ + L TD
Sbjct: 229 NKEDSLDLASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTD 288
Query: 747 VFGNYVIQKFFEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
FGNY+IQK E Q ++ +LT G ++ +S+ YG RV+QK IE V +Q
Sbjct: 289 PFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQIS 348
Query: 804 MVKE-LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQ 862
+VK L + R+ NGNHVI C++ + +FI+ + ++T +GC V+Q
Sbjct: 349 LVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQ 408
Query: 863 RVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIV 922
R + + E+ + ++DEI ++ +LAQD +GNY+VQ+++E K ++ +L G V
Sbjct: 409 RCVSYSVGEQHEK-LVDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYV 465
Query: 923 QMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEENEPLQ 964
+++ QKF S+V+EKCL + P R +VNE++ + LQ
Sbjct: 466 KLATQKFGSHVVEKCLRY-YPESRSQIVNELVSVLNFGYLLQ 506
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 131/248 (52%), Gaps = 11/248 (4%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQ 754
L+ G +V+ S + YG+R +Q+ +ET TT+E+ ++V ++P LSL ++ GN+VI
Sbjct: 313 RLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVIL 372
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMR 814
+ + + + + + T + ++ +GC V+Q+ + +Q ++V E+ + +
Sbjct: 373 NCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLL 432
Query: 815 CVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQ 874
+D GN+++Q IE + ++ V L+T +G V+++ L + + ++Q
Sbjct: 433 LAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQ 490
Query: 875 SIMMDEILQSVCM--LAQDQYGNYVVQHVLEHGKPHERSAIIKKLTG----QIVQMSQQK 928
+++E++ + L QD Y NYV+Q L K R+++++K+ ++ ++
Sbjct: 491 --IVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRYENLKMTPYCKRI 548
Query: 929 FASNVIEK 936
F+ N+ +K
Sbjct: 549 FSKNLWKK 556
>sp|Q1PFN9|PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1
Length = 564
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 159/307 (51%), Gaps = 22/307 (7%)
Query: 663 VMGPWHSEAGGSLDESFA--SSLLDEF-------KSNKTKCFELSEIAGHVVEFSADQYG 713
++ P+H + G L S+ + L+ + KSN + EI G V + DQ G
Sbjct: 205 LLSPFHEKVSGKLGASYLEDTVLIGQGSYGKMSPKSN-NDLVSMVEIYGSVNLMAKDQIG 263
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
R +Q+ +E T E ++ I+ + L D FGNY++QK F+ Q + LT
Sbjct: 264 CRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQRTLIVSVLT 323
Query: 774 GH---VLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCI 829
+ ++ + L YG RV+QK IE V+ QQ +VK L + V+D NGNHVIQ C+
Sbjct: 324 SNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQSCL 383
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
+ + + +F++ ++ H +GC V+Q + + + + ++ EI ++ L+
Sbjct: 384 QTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRER-LVAEISRNSLHLS 442
Query: 890 QDQYGNYVVQHVLEHGKPHERSAI--IKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQ 947
QD +GNYVVQ++++ + SA+ + + +++ QKF+S+VIEKCL P R
Sbjct: 443 QDPFGNYVVQYLID----QQVSAVKLLVQFRMHYAELATQKFSSHVIEKCLR-KYPESRA 497
Query: 948 ALVNEML 954
+V E+L
Sbjct: 498 EIVRELL 504
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
Query: 704 VVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTA 762
++ + YG+R +Q+ +ET T+++ +V + P L+L+ D+ GN+VIQ +
Sbjct: 329 LIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGP 388
Query: 763 SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGN 822
+ + + T + +++ +GC V+Q I Q+ ++V E+ + + +D GN
Sbjct: 389 NDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLHLSQDPFGN 448
Query: 823 HVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL 882
+V+Q I+ A++ +V F L+T + VI++ L + + + + +
Sbjct: 449 YVVQYLID-QQVSAVKLLV-QFRMHYAELATQKFSSHVIEKCLRKYPESRAEIVRELLCV 506
Query: 883 QSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKL 917
+ L QD Y NYV+Q L K R+ ++ K+
Sbjct: 507 PNFEYLLQDPYANYVIQTALSVTKGPVRAKLVAKV 541
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 876 IMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIE 935
+ M EI SV ++A+DQ G V+Q ++E G HE I+ + +V++S F + +++
Sbjct: 245 VSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQ 304
Query: 936 KCLSFGTPAERQALVNEMLGSIEENEPLQVC 966
K +R +V+ + + E +++C
Sbjct: 305 KLFDVSDEEQRTLIVSVLTSN--PRELIRIC 333
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 140/257 (54%), Gaps = 6/257 (2%)
Query: 689 SNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVF 748
S + ++ + I ++ S DQ S F+QQKL+ ++ + K + I+ Q LM + F
Sbjct: 352 SERNAVYDWNVIIDKII-VSNDQQSSIFLQQKLKISSYDMKQNIVDSIISQIHPLMLNRF 410
Query: 749 GNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
GN+++Q+ FEHGTA Q+R++ + G++L L+ +GC V+QKAI+ V D + M+ EL
Sbjct: 411 GNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMMDEL 470
Query: 809 DGHIMRCVRDQNGNHVIQKCIEC----VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
I + HV QK E P + + + + ++ G V+Q +
Sbjct: 471 FLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNM 530
Query: 865 LEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
E+C EK + ++EI+ + +A+ Q+GN+VVQH++E+G+ + +I L + V+
Sbjct: 531 FENCV-EKDKRECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEF 589
Query: 925 SQQKFASNVIEKCLSFG 941
S +FAS VIEK + G
Sbjct: 590 SIDQFASKVIEKAIKSG 606
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 122/290 (42%), Gaps = 49/290 (16%)
Query: 710 DQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELA 769
+++G+ +Q+ E T + + ++ L L TD FG +V+QK ++ T +
Sbjct: 408 NRFGNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMM 467
Query: 770 DQLTGHVLTLSLQMYGCRVIQKAIEV---------------------------------- 795
D+L + + Y C V QK E
Sbjct: 468 DELFLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVV 527
Query: 796 -------VELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQV 848
VE D++ + ++E+ H+ R Q GN V+Q +E + ++ ++ ++
Sbjct: 528 QNMFENCVEKDKR-ECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRA 586
Query: 849 VTLSTHPYGCRVIQRVLE-------HCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHV 901
V S + +VI++ ++ + ++ + +D Q + +A DQYGNY++Q +
Sbjct: 587 VEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQI 646
Query: 902 LEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVN 951
++ G+P E++ +I + +V + K+ V + + + +++N
Sbjct: 647 IQLGQPAEKNLVITHIKKHMVSLRGSKYGQKVAYLVEKWNSQKQVSSVIN 696
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 8/169 (4%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
+ G E + + GS +Q E ++K +EI+ + +GN+V+Q E+
Sbjct: 510 LRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIEEIIFHLDGIARGQWGNWVVQHMVEN 569
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE-------VVELDQQTQM-VKELDGH 811
G ++ + D L + S+ + +VI+KAI+ + L Q T V
Sbjct: 570 GQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQP 629
Query: 812 IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
++ DQ GN++IQ+ I+ ++ +V+L YG +V
Sbjct: 630 LIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMVSLRGSKYGQKV 678
Score = 40.0 bits (92), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 46/82 (56%)
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
++D I+ + L +++GN++VQ EHG + + + G +++++ F +V++K
Sbjct: 394 IVDSIISQIHPLMLNRFGNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQK 453
Query: 937 CLSFGTPAERQALVNEMLGSIE 958
+ T + A+++E+ +I+
Sbjct: 454 AIDNVTEDIKLAMMDELFLTID 475
>sp|Q9LP21|PUM10_ARATH Putative pumilio homolog 10 OS=Arabidopsis thaliana GN=APUM10 PE=3
SV=2
Length = 528
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 10/263 (3%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+ EI G V + DQ G R +Q+ +E T + ++F EI+ + L D GNY++QK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 757 FEHGTASQVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHI 812
Q + LT ++ + L G RVIQK I+ V+ QQ +VK L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 813 MRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ V D NG HV+Q C+E VP D +F+V + L+TH YGC V+Q L +
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDN-KFVVEAATEYCAQLATHQYGCYVLQCSLINTVGL 389
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
+ + ++ EI + L+QD +GNYVVQ +++ + ++ ++++ QKF+S
Sbjct: 390 QHER-LVAEISRDSLRLSQDPFGNYVVQCLID--QQVSSVNLLLPFRTHCIELATQKFSS 446
Query: 932 NVIEKCLSFGTPAERQALVNEML 954
+VIEKCL P R +V E+L
Sbjct: 447 HVIEKCLR-KYPESRAEIVRELL 468
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 13/220 (5%)
Query: 704 VVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTA 762
+++ + G+R IQ+ ++T T+++ +V + P L L+ D G +V+Q E
Sbjct: 293 LIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFLVLVNDSNGYHVLQSCLEFLVP 352
Query: 763 SQVRELADQLTGHVLTLSLQMYGCRVIQKA-IEVVELDQQTQMVKELDGHIMRCVRDQNG 821
+ + + + T + L+ YGC V+Q + I V L Q ++V E+ +R +D G
Sbjct: 353 NDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGL-QHERLVAEISRDSLRLSQDPFG 411
Query: 822 NHVIQKCIECVPEDAIQFI--VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD 879
N+V+Q C+ + + + +L F + L+T + VI++ L + + + ++
Sbjct: 412 NYVVQ----CLIDQQVSSVNLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRAE--IVR 465
Query: 880 EILQ--SVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKL 917
E+L + L QD Y NYV+Q L K R+ +++K+
Sbjct: 466 ELLSYPNFEQLLQDPYANYVIQTALSVTKGAVRARLVEKV 505
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 876 IMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIE 935
+ M EI SV ++A+DQ G +Q ++E G + I ++ +V++S + +++
Sbjct: 209 VSMVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQ 268
Query: 936 KCLSFGTPAERQALVNEMLGSIEENEPLQVC 966
K L +R +V+ + + + E +++C
Sbjct: 269 KLLVVSDEEQRTMIVSVL--TSKPRELIKIC 297
>sp|Q09312|FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Caenorhabditis elegans GN=fbf-2 PE=1
SV=1
Length = 632
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 155/299 (51%), Gaps = 46/299 (15%)
Query: 697 LSEI--AGHVVEFSADQYGSRFIQQKLE-TATTEEKNMVFQEIMPQA---LSLMTDVFGN 750
LSE+ +G +++F+ D+ G +F+++ ++ + T+ +K +F++++ + L L T++FGN
Sbjct: 185 LSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGN 244
Query: 751 YVIQKFF-------EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
Y++Q + G + +L + ++ + + L + CRVIQ +++ ++L +
Sbjct: 245 YLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACK 304
Query: 804 MVKEL--DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT------LSTHP 855
+V+ L D ++ DQN NHVIQK + +P +FIV D V T + +
Sbjct: 305 LVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIV----DFVATPEHLRQICSDK 360
Query: 856 YGCRVIQRVLEHCH---------------DEKTQSIMMDEILQSVCMLAQDQYGNYVVQH 900
YGCRV+Q ++E E+ +M + LA ++Y NY++QH
Sbjct: 361 YGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQH 420
Query: 901 VLEHGK-PHERSAIIKK-LTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
++ + R II+K L ++ +SQ+KFAS+V+EK P E L+ EM+ I
Sbjct: 421 IVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAF-LHAPLE---LLAEMMDEI 475
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 48/243 (19%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA--LSLMTDVFGNYVIQKFF 757
I+ + + D++ R IQ L+ + Q + A +++ D N+VIQK
Sbjct: 273 ISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVV 332
Query: 758 EHGTASQVRELADQLTG--HVLTLSLQMYGCRVIQKAIEV-------VELDQQTQMVKE- 807
+ D + H+ + YGCRV+Q IE V+L Q ++E
Sbjct: 333 AVIPLKNWEFIVDFVATPEHLRQICSDKYGCRVVQTIIEKLTADSMNVDLTSAAQNLRER 392
Query: 808 -----LDGHIMRC---VRDQNGNHVIQKCI---------ECVPEDAIQFIVLTFYDQVVT 850
+ RC ++ N++IQ + EC+ E + +++
Sbjct: 393 ALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYRECIIEKCLM-------RNLLS 445
Query: 851 LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQ-----------SVCMLAQDQYGNYVVQ 899
LS + V+++ H E MMDEI ++ ++ Q+GNYVVQ
Sbjct: 446 LSQEKFASHVVEKAFLHAPLELLAE-MMDEIFDGYIPHPDTGKDALDIMMFHQFGNYVVQ 504
Query: 900 HVL 902
+L
Sbjct: 505 CML 507
>sp|Q10238|MPF1_SCHPO Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mpf1 PE=4 SV=1
Length = 581
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 128/236 (54%), Gaps = 5/236 (2%)
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
F DQ S +QQ+L+ E+ + I+P +++LM + FGN++IQK FE+ T +Q++
Sbjct: 263 FQNDQAASLSLQQQLKNEDIEDNINLINTILPFSVTLMKNKFGNFLIQKCFEYSTEAQLQ 322
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
+ L HV LS+ +G V+QK++E+ +++EL + + ++ HV Q
Sbjct: 323 SFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATLMQRHSCHVWQ 382
Query: 827 KCIECVPEDAIQFIVLTFYDQV----VTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL 882
K E + + I F ++ + +S G V+Q + E+C EK + +DEI+
Sbjct: 383 KFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENC-KEKDKRTCLDEII 441
Query: 883 QSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCL 938
++ + Q+GN+V+QH++EHG ++ I+ L ++ S ++AS V+E+ L
Sbjct: 442 NNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKVVERAL 497
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 27/265 (10%)
Query: 693 KCFELSE----------IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALS 742
KCFE S + HV E S D +GS +Q+ LE N + +E++ +
Sbjct: 311 KCFEYSTEAQLQSFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPA 370
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELAD----QLTGHVLTLSLQMYGCRVIQKAIEVVEL 798
+ +V QKFFE S V + D ++ G L +S+ G V+Q E +
Sbjct: 371 TLMQRHSCHVWQKFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENCKE 430
Query: 799 DQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
+ + E+ ++ + + Q GN VIQ IE E Q I+ + +V + ST+ Y
Sbjct: 431 KDKRTCLDEIINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYAS 490
Query: 859 RVIQRVLEHCH----DEKTQSIMMDE------ILQSVCMLAQDQYGNYVVQHVLEHGKPH 908
+V++R L CH D + I + LQ + A +QYGNY+VQ++L+ P
Sbjct: 491 KVVERALRVCHVTFFDRYVKEITTPQNELPTIFLQEI---ASNQYGNYIVQYLLQVATPS 547
Query: 909 ERSAIIKKLTGQIVQMSQQKFASNV 933
+ + + + L +V + K+ +
Sbjct: 548 QINLMAEHLKKHMVSLRGHKYGQRI 572
>sp|Q9N5M6|FBF1_CAEEL Fem-3 mRNA-binding factor 1 OS=Caenorhabditis elegans GN=fbf-1 PE=1
SV=1
Length = 614
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 155/300 (51%), Gaps = 48/300 (16%)
Query: 697 LSEI--AGHVVEFSADQYGSRFIQQKLE-TATTEEKNMVFQEIMPQA---LSLMTDVFGN 750
LSE+ +G +++F+ D+ G +F+++ ++ + T+ +K +F++++ + L L T++FGN
Sbjct: 183 LSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGN 242
Query: 751 YVIQKF-------FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
Y +Q+ ++ + +L + ++ + + L + CRVIQ +++ ++L +
Sbjct: 243 YFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACK 302
Query: 804 MVKEL--DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT------LSTHP 855
+V+ L D ++ DQN NHVIQK + +P +FIV D V T +
Sbjct: 303 LVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIV----DFVATPEHLRQICFDK 358
Query: 856 YGCRVIQRVLE----------------HCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
YGCRV+Q ++E H + Q +M + LA ++Y NY++Q
Sbjct: 359 YGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMT-SVTNRCQELATNEYANYIIQ 417
Query: 900 HVLEHGK-PHERSAIIKK-LTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSI 957
H++ + R II+K L ++ +SQ+KFAS+V+EK P E L+ EM+ I
Sbjct: 418 HIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAF-LHAPME---LLAEMMDEI 473
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 48/243 (19%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA--LSLMTDVFGNYVIQKFF 757
I+ + + D++ R IQ L+ + Q + A +++ D N+VIQK
Sbjct: 271 ISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVV 330
Query: 758 EHGTASQVRELADQLTG--HVLTLSLQMYGCRVIQKAIEV-------VELDQQTQMVKE- 807
+ D + H+ + YGCRV+Q IE V+L Q ++E
Sbjct: 331 AVIPLKNWEFIVDFVATPEHLRQICFDKYGCRVVQTIIEKLTADSINVDLTSAAQHLRER 390
Query: 808 -----LDGHIMRC---VRDQNGNHVIQKCI---------ECVPEDAIQFIVLTFYDQVVT 850
+ RC ++ N++IQ + EC+ E + +++
Sbjct: 391 ALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYRECIIEKCLM-------RNLLS 443
Query: 851 LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQ-----------SVCMLAQDQYGNYVVQ 899
LS + V+++ H E MMDEI ++ ++ Q+GNYVVQ
Sbjct: 444 LSQEKFASHVVEKAFLHAPMELLAE-MMDEIFDGYMPHPGTGKDALDIMMFHQFGNYVVQ 502
Query: 900 HVL 902
+L
Sbjct: 503 CML 505
>sp|Q9FMH4|PUM13_ARATH Putative pumilio homolog 13 OS=Arabidopsis thaliana GN=APUM13 PE=3
SV=1
Length = 527
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 130/302 (43%), Gaps = 21/302 (6%)
Query: 662 GVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKL 721
GV W S G + ++ A+S ++ + G + D+ S+ +++ +
Sbjct: 184 GVNNSWRSNEGCTYNQDQAASSMENGR-------------GSYFSIATDRVWSKELEKTI 230
Query: 722 ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHV---LT 778
T E +M+F ++ LM D FGN V++ ++ Q+ + D +T H+ +
Sbjct: 231 FVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVN 290
Query: 779 LSLQMYGCRVIQKAIEVVELDQQTQMVKELDG---HIMRCVRDQNGNHVIQKCIECVPED 835
+ G IQ + + Q+ + +D ++ R+ N +VI C
Sbjct: 291 ICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSS 350
Query: 836 AIQFIVLTFYDQVVTLSTHPYGCRVIQRVL--EHCHDEKTQSIMMDEILQSVCMLAQDQY 893
+ ++ ++ GC ++Q+ E + + + ++ E+++ L + +
Sbjct: 351 QCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCH 410
Query: 894 GNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEM 953
GNYVVQ+V+E HE ++ KL +++ K+ S+V++K L + +V+ +
Sbjct: 411 GNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDLL 470
Query: 954 LG 955
G
Sbjct: 471 RG 472
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 9/225 (4%)
Query: 719 QKLETATTEEKNMVFQEIMPQ----ALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
Q L T+ E N IM AL L + YVI F T+SQ R L + ++
Sbjct: 302 QVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQ 361
Query: 775 HVLTLSLQMYGCRVIQKAIE---VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
H +++ GC ++Q+ + V + + +++ E+ H ++ + +GN+V+Q +E
Sbjct: 362 HCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVEL 421
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQD 891
+ +V L+ + YG V+Q++L+ ++ I++D +L+ + L D
Sbjct: 422 DNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLK-LRGIDSKLIVVD-LLRGIDTLLLD 479
Query: 892 QYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
+GNYV+Q K R + + I M KF + ++EK
Sbjct: 480 PFGNYVIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNKILEK 524
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 692 TKCFELSEIAG-HVVEFSADQYGSRFIQQKLETATT---EEKNMVFQEIMPQALSLMTDV 747
++C L E+ H + + DQ G +QQ + E + + E++ AL L +
Sbjct: 350 SQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNC 409
Query: 748 FGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE 807
GNYV+Q E + L ++L + L+ YG V+QK +++ +D + +V
Sbjct: 410 HGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDL 469
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
L G I + D GN+VIQ ED Q + + + + +G ++++++
Sbjct: 470 LRG-IDTLLLDPFGNYVIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNKILEKL 525
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 15/258 (5%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLE---------TATTEEKNMVFQEIMPQALSLMTD 746
EL++ A + S R KL T EE + + + L +D
Sbjct: 725 ELTDFAAQIPSISKAFSSRRLNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSD 784
Query: 747 VFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV- 805
GN V+QK F++ + + +++ H+ + + G QK ++V + Q +++
Sbjct: 785 HLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIA 844
Query: 806 KELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
K L +I DQ GN+V+Q C++ P + F+ +Q ++ YG R ++
Sbjct: 845 KHLQPYIPLLFADQFGNYVVQTCLKFGAPMN--DFVFEAILNQFWVIAQSRYGSRAVRAC 902
Query: 865 LEHCHDEKTQSIMMDEILQSVCM-LAQDQYGNYVVQHVLEH-GKPHERSAIIKKLTGQIV 922
LE + Q +++ + + LA + G ++ +++E+ PH + ++ IV
Sbjct: 903 LESPDVTEEQRVLVAAAITVYSVHLAMNGNGTLLLTYLVENMNYPHIPILLTRRFVQDIV 962
Query: 923 QMSQQKFASNVIEKCLSF 940
++ + A N + K +S
Sbjct: 963 RVCTHRLAYNSLLKIISI 980
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 818 DQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIM 877
D GN V+QK + + + ++ + + H G Q++++ E ++
Sbjct: 784 DHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLI 843
Query: 878 MDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKC 937
+ + +L DQ+GNYVVQ L+ G P + + + Q ++Q ++ S + C
Sbjct: 844 AKHLQPYIPLLFADQFGNYVVQTCLKFGAPMN-DFVFEAILNQFWVIAQSRYGSRAVRAC 902
Query: 938 LSFGTPAERQALV 950
L E Q ++
Sbjct: 903 LESPDVTEEQRVL 915
>sp|P47135|JSN1_YEAST Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JSN1 PE=1 SV=1
Length = 1091
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 10/226 (4%)
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLT-LSLQMYGCRVIQKAIEVVELDQQ 801
L +D GN ++QK FEH ++ ++++ + T LT + + G QK I + +Q
Sbjct: 625 LSSDYLGNTIVQKLFEH-SSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQ 683
Query: 802 T-QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q+ + + + + DQ GN+VIQ C+ QFI + + + YG R
Sbjct: 684 IMQVTQGVKDYCTPLINDQFGNYVIQ-CVLKFGFPWNQFIFESIIANFWVIVQNRYGARA 742
Query: 861 IQRVLEHCHDEKT--QSIMMDEILQSVC-MLAQDQYGNYVVQHVLEHGK-PHERSAIIKK 916
++ LE HD T QSI++ ++ + L+ + G +V L+ P+ S + +
Sbjct: 743 VRACLE-AHDIVTPEQSIVLSAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNRHSILAPR 801
Query: 917 LTGQIVQMSQQKFASNVIEKCLSF-GTPAERQALVNEMLGSIEENE 961
LT +IV++ + AS I K L++ G R+ +++ + G++ ++
Sbjct: 802 LTKRIVELCGHRLASLTILKVLNYRGDDNARKIILDSLFGNVNAHD 847
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 20/273 (7%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNM-VFQEIMPQALS 742
L E S+ K L + + ++ + G+ Q+ + A T + M V Q +
Sbjct: 638 LFEHSSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQIMQVTQGVKDYCTP 697
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE---VVELD 799
L+ D FGNYVIQ + G + + + + + + YG R ++ +E +V +
Sbjct: 698 LINDQFGNYVIQCVLKFGFPWN-QFIFESIIANFWVIVQNRYGARAVRACLEAHDIVTPE 756
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q + + + + NG ++ ++ V + + ++V L H
Sbjct: 757 QSIVLSAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNRHSILAPRLTKRIVELCGHRLAS 816
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVC------------MLAQDQYGNYVVQHVLEHGK 906
I +VL + D+ + I++D + +V +L + YG V VL
Sbjct: 817 LTILKVLNYRGDDNARKIILDSLFGNVNAHDSSPPKELTKLLCETNYGPTFVHKVLAMPL 876
Query: 907 PHE--RSAIIKKLTGQIVQMSQQKFASNVIEKC 937
+ R+ IIK++ + +Q + + ++E+
Sbjct: 877 LEDDLRAHIIKQVRKVLTDSTQIQPSRRLLEEV 909
>sp|O60059|YG58_SCHPO Pumilio domain-containing protein C56F2.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC56F2.08c PE=1
SV=1
Length = 661
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 725 TTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMY 784
T EE ++ + ++ L +D GN V+QKFFE+ + + +++ ++ + +
Sbjct: 181 TQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIHKN 240
Query: 785 GCRVIQKAIEVVELDQQTQM-VKELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVL 842
G QK I+V ++Q + VK L + DQ GN+V Q C+ P++ F V+
Sbjct: 241 GTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYPKNTFLFEVM 300
Query: 843 TFYDQVVTLSTHPYGCRVIQRVLEHCHDE-KTQSIMMDEILQSVCMLAQDQYGNYVVQHV 901
+ +G R I+ LE+ + + Q++++ I+ + +LA + G ++ +
Sbjct: 301 A--RHCCEIGQSRFGARAIRACLENENATFEQQALVVASIIINSHLLATNSNGMLLLTWL 358
Query: 902 LEHGKPHERSAIIK-KLTGQIVQMSQQKFASNVIEKCLSFG-TPAERQALVNEMLGSIEE 959
L++ R ++ L + K AS +I K ++ P R L+ + S ++
Sbjct: 359 LDNSFFRNRHRLLAIHLATHLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLFFSEKD 418
Query: 960 NEPLQVCQ 967
N + Q
Sbjct: 419 NVLTYILQ 426
>sp|Q4PSD1|PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis thaliana GN=APUM14 PE=2 SV=1
Length = 518
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 122/275 (44%), Gaps = 16/275 (5%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F+ ++ F+ D+ S + + T E + ++ ++ LM D +G+ V+Q
Sbjct: 196 FDYNQCQASFSAFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQ 255
Query: 755 KFFEHGTASQVRELADQLTGHV---LTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH 811
++ Q+ +L D +T + + + + G IQ + + + Q+ + +D
Sbjct: 256 LLMRRCSSEQIVQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVD-- 313
Query: 812 IMRCVRDQ--NGNH---VIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLE 866
++R V Q NH VI C P + ++ ++ +GC ++Q
Sbjct: 314 VVRTVALQLSKSNHAIFVILACFRLFPLHC-RLLLELIVQNCHQIAIDQHGCCLLQLCFN 372
Query: 867 HCHD---EKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQ 923
E Q ++M+ I ++ L + YGNYVVQ+++E + A++++L G
Sbjct: 373 KDRVPNLEIRQRLIMEAIANAL-RLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAH 431
Query: 924 MSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIE 958
+++ K+ S+ ++K L R +V ++L I+
Sbjct: 432 LARNKYGSHAVQKLLKLRWIDSR-VIVIDLLREID 465
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 10/174 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQ---QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVI 753
L I + + + DQ+G +Q K E + + E + AL L + +GNYV+
Sbjct: 347 LELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVV 406
Query: 754 QKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT---QMVKELDG 810
Q E + L QL G+ L+ YG +QK +++ +D + +++E+D
Sbjct: 407 QYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLKLRWIDSRVIVIDLLREIDT 466
Query: 811 HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
++ D GN+VIQ +D + + + + + +G +V++++
Sbjct: 467 LLL----DPFGNYVIQTAWFVSKDDVRRMLRYHIERNIPMMRCNKFGNKVLEKL 516
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 48/282 (17%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEE----KNMVFQEIMPQALSLMTDVFGNYVIQK 755
+ G + E D YGS +Q + ++E+ ++V Q+ M Q +++ D G IQ
Sbjct: 237 LIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQ-MFQFVNICIDSLGTNAIQV 295
Query: 756 FFEH----------GTASQVRELADQLT--GHVLTLSLQMY------------------- 784
VR +A QL+ H + + L +
Sbjct: 296 LLTCINERAKDQIPRIVDVVRTVALQLSKSNHAIFVILACFRLFPLHCRLLLELIVQNCH 355
Query: 785 -------GCRVIQKAI---EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPE 834
GC ++Q V L+ + +++ E + +R + GN+V+Q +E
Sbjct: 356 QIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNR 415
Query: 835 DAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYG 894
I +V L+ + YG +Q++L+ ++ I++D +L+ + L D +G
Sbjct: 416 YLIDALVRQLIGNYAHLARNKYGSHAVQKLLK-LRWIDSRVIVID-LLREIDTLLLDPFG 473
Query: 895 NYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
NYV+Q K R + + I M KF + V+EK
Sbjct: 474 NYVIQTAWFVSKDDVRRMLRYHIERNIPMMRCNKFGNKVLEK 515
>sp|Q562C7|K0020_RAT Pumilio domain-containing protein KIAA0020 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 647
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ + E++ F+E+ + L + +++KF +
Sbjct: 165 IQGKIKTIAFAHDSTRVIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMY 224
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ Q+ E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 225 GSKPQIAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYK- 283
Query: 819 QNGNH-VIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +H ++K +E P ++ I +LT Q + H +V +
Sbjct: 284 -SADHPTLEKVLEVQP-GKLELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PP 340
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
K +S +++ I ++V LA G V H L HG P +R I+K + + +++ +++
Sbjct: 341 KLRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSH 400
Query: 932 NVIE---KCLSFGTPAERQALVNEMLGSI 957
V+ C+ T +Q +++E++ S+
Sbjct: 401 LVLLAAFDCID-DTKLVKQIIISEVISSL 428
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 843 TFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD--EILQ-SVCMLAQDQYGNYVVQ 899
T YD VV + H + ++R + C EK +M D +++Q + +A V+Q
Sbjct: 129 TNYD-VVVRAKHIWES--LRR--KDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQ 183
Query: 900 HVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
++++G +R ++L G +V++S+ K++ N+++K L +G+ + ++ G + +
Sbjct: 184 CLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRK 243
>sp|Q15397|K0020_HUMAN Pumilio domain-containing protein KIAA0020 OS=Homo sapiens
GN=KIAA0020 PE=1 SV=3
Length = 648
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ E++ F+E+ + L + +++KF +
Sbjct: 166 IQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMY 225
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ Q+ E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 226 GSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKS 285
Query: 819 QNGNHVIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ + + K +E PE ++ I +LT Q + H +V + K
Sbjct: 286 AD-HRTLDKVLEVQPE-KLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PPK 342
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
+S M++ I ++V LA G V H L HG P +R I+K + + +++ +++
Sbjct: 343 LRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHL 402
Query: 933 VI 934
V+
Sbjct: 403 VL 404
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 868 CHDEKTQSIMMD--EILQ-SVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
C EK +M D +++Q + +A V+Q +++G +R ++L +V++
Sbjct: 150 CDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVEL 209
Query: 925 SQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
S+ K++ N+++K L +G+ + ++ G + +
Sbjct: 210 SKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRK 244
>sp|Q8BKS9|K0020_MOUSE Pumilio domain-containing protein KIAA0020 OS=Mus musculus
GN=Kiaa0020 PE=2 SV=2
Length = 647
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 12/243 (4%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ E++ FQE+ + L + +++KF +
Sbjct: 165 IQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMY 224
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ QV E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 225 GSKPQVAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYK- 283
Query: 819 QNGNH-VIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +H + K +E P ++ I +LT Q + H +V +
Sbjct: 284 -SADHPTLDKVLELQPA-KLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PP 340
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFAS 931
K +S +++ I ++V LA G V H L HG P +R I+K + + +++ +++
Sbjct: 341 KPRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSH 400
Query: 932 NVI 934
V+
Sbjct: 401 LVL 403
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 868 CHDEKTQSIMMD--EILQ-SVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQM 924
C EK +M D +++Q + +A V+Q +++G +R ++L G +V++
Sbjct: 149 CDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVEL 208
Query: 925 SQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
S+ K++ N+++K L +G+ + ++ G + +
Sbjct: 209 SKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRK 243
>sp|O81465|PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis thaliana GN=APUM15 PE=3 SV=1
Length = 477
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 111/259 (42%), Gaps = 16/259 (6%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
S +Q + E + +F ++ LM D +G+ V +K E T Q+ + D +
Sbjct: 165 SHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVL 224
Query: 774 ---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHI-MRCVRDQNGNHVIQKCI 829
+ L + +G IQ + + ++Q E ++ + +D + VI C
Sbjct: 225 EEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCF 284
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
++++ ++ GC ++++++ E + ++ EI+ L
Sbjct: 285 NQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRE-LRDPLIKEIISIAVRLC 343
Query: 890 QDQYG----------NYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLS 939
+ YG NYVVQ++L SA+ K L G VQ+S K+ S+V++KCL
Sbjct: 344 GNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE 403
Query: 940 FGTPAERQALVNEMLGSIE 958
+ R+ ++ E+L I+
Sbjct: 404 SREFSSRR-IIAELLSDID 421
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 92/250 (36%), Gaps = 52/250 (20%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQ-------------------- 739
+ HV E D YG + ++ +E T E+ V ++ +
Sbjct: 187 LISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHAIQGL 246
Query: 740 --------------------ALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTL 779
+L L DV + VI F + S R L + + + +
Sbjct: 247 MRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQNCYQV 306
Query: 780 SLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNG----------NHVIQKCI 829
++ GC +++K I + + ++KE+ +R + G N+V+Q +
Sbjct: 307 AIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLL 366
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
+ + V LS YG V+Q+ LE E + ++ E+L + L
Sbjct: 367 RLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE--SREFSSRRIIAELLSDIDSLL 424
Query: 890 QDQYGNYVVQ 899
D YG+YV+Q
Sbjct: 425 VDPYGDYVIQ 434
>sp|Q9FIE9|PUM16_ARATH Putative pumilio homolog 16 OS=Arabidopsis thaliana GN=APUM16 PE=3
SV=2
Length = 332
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 845 YDQVVT----LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQH 900
YDQ++ L+ YGC + ++ D + ++D + + +L+ D YGN+VVQH
Sbjct: 151 YDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQH 210
Query: 901 VLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLSFG 941
VL+ I KL G V++S +K+ S ++E+ L G
Sbjct: 211 VLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAG 251
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKL-ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFF 757
+I + + DQYG + + + + ++ + + AL L D +GN+V+Q
Sbjct: 153 QILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVL 212
Query: 758 EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH---IMR 814
+ + R +AD+L G+ + LS + YG ++++ +E ++ T ++ L ++R
Sbjct: 213 KLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEMLIR 272
Query: 815 CVRDQNGNHVIQKCIECVPE 834
R + GN V+ K +E E
Sbjct: 273 LARSEYGNFVVCKALELTNE 292
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 701 AGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYV-IQ--KFF 757
+ + + ++ GS+ +Q KL + + F+ IM + +MTD + +YV IQ + F
Sbjct: 84 CDYFMVITTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVF 142
Query: 758 EHGTASQVRELA-DQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ---QTQMVKELDGHIM 813
+ REL DQ+ + L+ YGC + + I +LD + Q++ + + +
Sbjct: 143 QQDK----RELMYDQILRYACFLAGDQYGCIALNEII--TDLDDPYYRDQLLDIVANNAL 196
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKT 873
D GN V+Q ++ + I V LS YG +++R+LE D
Sbjct: 197 LLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE-AGDVPM 255
Query: 874 QSIMMDEI---LQSVCMLAQDQYGNYVVQHVLE 903
++++D + + + LA+ +YGN+VV LE
Sbjct: 256 ATVVLDLLACKTEMLIRLARSEYGNFVVCKALE 288
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
L +A + + S D YG+ +Q L+ + + ++ + L +G+Y++++
Sbjct: 188 LDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERL 247
Query: 757 FEHG---TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEV 795
E G A+ V +L T ++ L+ YG V+ KA+E+
Sbjct: 248 LEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALEL 289
>sp|Q9C8B8|PUM17_ARATH Putative pumilio homolog 17 OS=Arabidopsis thaliana GN=APUM17 PE=5
SV=2
Length = 332
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 845 YDQVVT----LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQH 900
YD ++ L+ YGC + +++ D + +MD + + +L+ D YGN+VVQH
Sbjct: 151 YDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQH 210
Query: 901 VLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCL 938
VL+ I KL G V++S +K+ S ++E+ L
Sbjct: 211 VLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLL 248
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 687 FKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKL-ETATTEEKNMVFQEIMPQALSLMT 745
FK +K + I + + + DQYG + + + E ++ + + AL L
Sbjct: 142 FKQDKRELMY-DHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSN 200
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D +GN+V+Q + + +AD+L G+ + LS + YG ++++ +EV ++ T ++
Sbjct: 201 DAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVL 260
Query: 806 KELDGH---IMRCVRDQNGNHVIQKCIE 830
L ++R R +NGN V+ K +E
Sbjct: 261 DLLACKTEMLIRLARSENGNFVVCKLLE 288
Score = 40.8 bits (94), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 44/189 (23%)
Query: 719 QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYV-IQ--KFFEHGTASQVRELA-DQLTG 774
QKL + + F IM + +M D + +YV IQ + F+ REL D +
Sbjct: 101 QKLMRMSDDMDVFFFVAIMRLFIHVMIDKYASYVAIQGMRIFKQDK----RELMYDHILR 156
Query: 775 HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPE 834
+ L L+ YGC + +++KELD R + ++ V
Sbjct: 157 YALFLARDQYGCIALN------------EIIKELDDPYYR-----------DELMDIVSN 193
Query: 835 DAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYG 894
+A+ LS YG V+Q VL+ HD + + D++ L+ +YG
Sbjct: 194 NAL------------LLSNDAYGNFVVQHVLK-LHDSRCTGNIADKLCGYCVELSFKKYG 240
Query: 895 NYVVQHVLE 903
+Y+V+ +LE
Sbjct: 241 SYIVERLLE 249
>sp|Q9LXC5|PUM21_ARATH Putative pumilio homolog 21 OS=Arabidopsis thaliana GN=APUM21 PE=3
SV=1
Length = 517
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+D + + D+ G +I I V + + + Y+ + L+ GC + VL+
Sbjct: 294 VDTNFFLLMSDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQ- 352
Query: 868 CHDEKTQSIMMDEILQSVC----MLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQ 923
+ + I D I + V L+ D YG +VVQ++L P +AI ++L G +
Sbjct: 353 ----EIRGIYRDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFR 408
Query: 924 MSQQKFASNVIEKCLSFGTPAERQALVNEMLGSIEE 959
++ ++ S V+EKCL + R ++ E G+ +E
Sbjct: 409 LAMERQGSYVVEKCLK--SDFARDQVLEEFRGNAKE 442
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 729 KNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRV 788
++++F+ + A L D +G +V+Q +A++L G L+++ G V
Sbjct: 359 RDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYV 418
Query: 789 IQKAIEVVELDQQTQMVKELDGHIMRCVR---DQNGNHVIQKCIECVPEDAIQFIVLTFY 845
++K ++ + Q+++E G+ VR D+ GN V+Q + + E ++ ++ F
Sbjct: 419 VEKCLK--SDFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEMRPLLREFV 476
Query: 846 DQV 848
+++
Sbjct: 477 EKL 479
Score = 37.0 bits (84), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 779 LSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQ 838
LS YG V+Q + + T + + L G R ++ G++V++KC++ D +
Sbjct: 373 LSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKCLKS---DFAR 429
Query: 839 FIVLTFY----DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSV 885
VL + + V ++T +G V+Q L EK ++ E ++ +
Sbjct: 430 DQVLEEFRGNAKEWVRMTTDKFGNFVVQSALR-VMKEKEMRPLLREFVEKL 479
>sp|Q12221|PUF2_YEAST mRNA-binding protein PUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF2 PE=1 SV=1
Length = 1075
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 21/254 (8%)
Query: 715 RFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
+F L T E+ +V + +P+ L +D GN VIQK FE+ +++ +R++ +
Sbjct: 559 QFDSNSLSTIEMEQLAIVMLDQLPE---LSSDYLGNTVIQKLFEN-SSNIIRDIMLRKCN 614
Query: 775 HVLT-LSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIEC- 831
LT + + G V QK I++ +Q +V + + DQ GN+VIQ ++
Sbjct: 615 KYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFGNYVIQGILKFG 674
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLE------HCHDEKTQSIMMDEILQSV 885
P ++ FI + T+ + YG R ++ LE C S+++ +L
Sbjct: 675 FPWNS--FIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQCQLLTITSLII--VLSP- 729
Query: 886 CMLAQDQYGNYVVQHVLEHGK-PHERSAIIKKLTGQ-IVQMSQQKFASNVIEKCLSFGTP 943
LA D G ++ +L+ P++ + KL + +V++ K S + K L+
Sbjct: 730 -YLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLGSLTVLKILNLRGG 788
Query: 944 AERQALVNEMLGSI 957
E N+++ +I
Sbjct: 789 EEEALSKNKIIHAI 802
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNG 821
A ++REL Q + L+ +++M + + +V LDQ + EL D G
Sbjct: 550 APKLRELRKQFDSNSLS-TIEM-------EQLAIVMLDQ----LPELSS-------DYLG 590
Query: 822 NHVIQKCIECVPEDAIQFIVLTFYDQVVT-LSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
N VIQK E + I+ I+L ++ +T + H G V Q++++ + + +++
Sbjct: 591 NTVIQKLFEN-SSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSG 649
Query: 881 ILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCL 938
+ L DQ+GNYV+Q +L+ G P S I + + + Q ++ S + CL
Sbjct: 650 VSDYCTPLFNDQFGNYVIQGILKFGFPWN-SFIFESVLSHFWTIVQNRYGSRAVRACL 706
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 7/188 (3%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALS 742
L E SN + L + ++ + G+ Q+ ++ A T + N+V +
Sbjct: 597 LFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTP 656
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
L D FGNYVIQ + G + + + H T+ YG R ++ +E + Q
Sbjct: 657 LFNDQFGNYVIQGILKFGFPWN-SFIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQC 715
Query: 803 QMVKELDGHIM---RCVRDQNGNHVIQKCIE--CVPEDAIQFIVLTFYDQVVTLSTHPYG 857
Q++ I+ D NG +I ++ +P + +V L H G
Sbjct: 716 QLLTITSLIIVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLG 775
Query: 858 CRVIQRVL 865
+ ++L
Sbjct: 776 SLTVLKIL 783
>sp|Q9LVG3|PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis thaliana GN=APUM18 PE=2 SV=1
Length = 327
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 19/254 (7%)
Query: 666 PWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAG-------HVVEFSADQYGSRFIQ 718
P H+ + + S E SN K EL +A + + ++GSR +Q
Sbjct: 40 PLHAALFNLMTDGDGVSYFKEMISNSDKT-ELQRMASLLTSDSDYFMSIVTTKFGSRRVQ 98
Query: 719 QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLT 778
KL + + I+ + L + TD + +YV + + L +++ H L
Sbjct: 99 -KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALD 157
Query: 779 LSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAI 837
L+ +GC + I + + + Q+++ + + +R D +GN V+Q + I
Sbjct: 158 LACDQHGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCI 217
Query: 838 QFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMM-----DEILQSVCMLAQDQ 892
I + Y Q + LS YG +++++LE + + D +++ LA+++
Sbjct: 218 HNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMR----LARNE 273
Query: 893 YGNYVVQHVLEHGK 906
+GN+VV L K
Sbjct: 274 FGNFVVVKALRFTK 287
>sp|Q9XI17|PUM20_ARATH Putative pumilio homolog 20 OS=Arabidopsis thaliana GN=APUM20 PE=5
SV=2
Length = 332
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 722 ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSL 781
+ T +N +F I +AL L D +GN+VIQ+ + + L GH + LS
Sbjct: 180 DIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSF 239
Query: 782 QMYGCRVIQKAIEVVELDQQTQMVKEL----DGHIMRCVRDQNGNHVIQKCIECVPEDAI 837
Q YG V+ +E E +V+EL +MR R++ GN ++ K + ++ +
Sbjct: 240 QKYGSYVVDVLLETKE--SMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMV 297
Query: 838 Q 838
+
Sbjct: 298 R 298
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 764 QVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
+++ +A LT + L ++ M G + IQK + + D + + + D+
Sbjct: 79 KLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTD-DVDALFAAAILRRFLHIITDKY 137
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH----PYGCRVIQRVLEHCHDEKTQSI 876
++V+++ + + + Y+ ++ ++H +G + ++ + K
Sbjct: 138 ASYVVRRGMTVFDKKKKK----AMYEHILHYASHIARDKHGNLALNDIITDAYRNK---- 189
Query: 877 MMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEK 936
+ D I +L+ D YGN+V+Q VL+ ++ I+ L G V +S QK+ S V++
Sbjct: 190 LFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDV 249
Query: 937 CLSFGTPAERQALVNEML 954
L T +V E++
Sbjct: 250 LLE--TKESMVVVVEELM 265
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 713 GSRFIQQKLETATTEEKNMVFQE-IMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQ 771
GS+ IQ+ L T++ + +F I+ + L ++TD + +YV+++ + + + +
Sbjct: 103 GSKRIQKLL--GKTDDVDALFAAAILRRFLHIITDKYASYVVRRGMTVFDKKKKKAMYEH 160
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
+ + ++ +G + +++ + ++ + + D GN VIQ+ ++
Sbjct: 161 ILHYASHIARDKHGNLALN---DIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKL 217
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQS----VCM 887
+ IV++ V LS YG V+ +LE +++ ++++E+++ +
Sbjct: 218 NDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLE---TKESMVVVVEELMECEGDMLMR 274
Query: 888 LAQDQYGNYVV 898
LA+++YGN++V
Sbjct: 275 LARNEYGNFLV 285
>sp|Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1
Length = 641
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 658 NLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFI 717
NL ++ W ++ + S L+ E + ++ G V E + SR +
Sbjct: 86 NLEQELVSLWEKMRRRNIGKEDRSKLISE---------AIRKMKGKVPEIAVSHVSSRVL 136
Query: 718 QQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVL 777
Q ++ + EK+++F E+ PQ L+L ++ + + IQK + + Q+ L GHV
Sbjct: 137 QTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKMLDGASKQQLAACISSLRGHVA 196
Query: 778 TLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
L ++G V++ A + Q+ +++ EL
Sbjct: 197 PLLRHVFGSLVVEHAYHLGSAAQKQELLAEL 227
Score = 37.4 bits (85), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 647 DRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVE 706
DR+ +R + G V E S S +F S K +E+ +
Sbjct: 107 DRSKLISEAIRKMKGKV-----PEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLN 161
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
++++Y FIQ+ L+ A+ ++ + L+ VFG+ V++ + G+A+Q +
Sbjct: 162 LASNKYAVHFIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQ 221
Query: 767 ELADQLTGHVLTL 779
EL +L L L
Sbjct: 222 ELLAELYSTELQL 234
>sp|Q9LSS8|PUM19_ARATH Putative pumilio homolog 19 OS=Arabidopsis thaliana GN=APUM19 PE=3
SV=2
Length = 327
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 688 KSNKTKCFELSEI----AGHVVEFSADQYGSRFIQQKLETATTEEKNMVF-QEIMPQALS 742
KS+KT+ ++ + + + + ++GSR +Q+ L +++ + F I+ + L
Sbjct: 64 KSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLL--GKSDDVDAFFCAAILRRFLH 121
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQ 801
+ TD + +YV + + L +++ H L L+ +GC + I + + +
Sbjct: 122 ITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYR 181
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
Q+++ + + +R D +GN V+Q + I I + Y Q + LS YG ++
Sbjct: 182 DQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIV 241
Query: 862 QRVLEHCHDEKTQSIMM-----DEILQSVCMLAQDQYGNYVVQHVLEHGK 906
+++LE + + D +++ LA++++GN+VV L K
Sbjct: 242 EKLLEVEESMVVVVVELLGCDGDRLMR----LARNEFGNFVVVKALRFTK 287
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVE 797
+LMTD G ++ ++++ +A LT + +++ +G R +QK + +
Sbjct: 46 FNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD 105
Query: 798 LDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYG 857
D + + D+ ++V + + + + + + L+ +G
Sbjct: 106 -DVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHG 164
Query: 858 CRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKL 917
C + ++ D + +++ ++ + L+ D GN+VVQHVL I L
Sbjct: 165 CIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNL 224
Query: 918 TGQIVQMSQQKFASNVIEK 936
GQ +++S +K+ S ++EK
Sbjct: 225 YGQCIELSFKKYGSYIVEK 243
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALSLMTDVFGNYVIQKFF 757
I H ++ + DQ+G + + A ++ + + ++ AL L D GN+V+Q
Sbjct: 150 RILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVL 209
Query: 758 EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDG-HIMRC 815
+ + +A L G + LS + YG +++K +EV E + DG +MR
Sbjct: 210 TLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRL 269
Query: 816 VRDQNGNHVIQKCIECVPE 834
R++ GN V+ K + E
Sbjct: 270 ARNEFGNFVVVKALRFTKE 288
>sp|O61345|PEN_DROME Protein penguin OS=Drosophila melanogaster GN=pen PE=2 SV=1
Length = 737
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+RC R +N + ++++ + VL D + + RVIQ +L++
Sbjct: 147 LRCRRTENKDKLVEQI----------YKVLNVGDTISKVVKAHDTARVIQSMLKYA-SPA 195
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
++ + +++L + Q +Y + VQ +L++G P ++ ++ L G IV+++ S
Sbjct: 196 LRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSG 255
Query: 933 VIEKCLSFGTPAERQALVNEMLGSI 957
+++ TP +R + E G +
Sbjct: 256 LLDSMYQSATPNQRIYMRQEFYGDL 280
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 52/107 (48%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
+R IQ L+ A+ + + ++++P + + + + +Q+ ++G + +L D L
Sbjct: 182 ARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLY 241
Query: 774 GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
GH++ L+ G ++ + +Q+ M +E G + R +D N
Sbjct: 242 GHIVRLAGHSIGSGLLDSMYQSATPNQRIYMRQEFYGDLYRKAKDSN 288
>sp|Q09622|PUF12_CAEEL Pumilio domain-containing protein 12 OS=Caenorhabditis elegans
GN=puf-12 PE=4 SV=1
Length = 766
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 111/269 (41%), Gaps = 14/269 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
+ GH + SR I+ + T N +F E+ P+ + + +V+ + ++K ++
Sbjct: 278 VKGHAAKLIYAHDTSRVIECLVATEREGIINNLFNELTPEIVRMSKNVYSKFFVKKMLKN 337
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
GT Q + + GH TL + V++ A + Q+ ++ E G R+
Sbjct: 338 GTKEQRDIIINAFRGHAPTLLRIKHAAEVLEYAYNDFANAHQRYNIITEFYGKEFILFRE 397
Query: 819 QNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR--VIQRVL----EHCHDEK 872
N + + E PE + ++L D+V+ R ++ +++ ++C +EK
Sbjct: 398 DNIRSLTEILAE-KPEKKV--VILKHLDEVIGAVNEKETLRLSILHKLMLDFFDNCDEEK 454
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 932
+ ++D + + G + ++ ER I+K V+ + + +
Sbjct: 455 KIN-LLDSLKDKIPEFIHTPDGAKLAIKLIWFAPVKERKLIVKNFKDLSVKAAMEHYGHR 513
Query: 933 VIEKCLSFGTPAERQALVNEMLGSIEENE 961
V+ L+ + L+N+++ S NE
Sbjct: 514 VL---LALFDTVDDTVLLNKVIVSELANE 539
>sp|Q9UU76|PUF6_SCHPO Pumilio homology domain family member 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=puf6 PE=1 SV=1
Length = 642
Score = 40.0 bits (92), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLT 918
RV+Q ++ ++ ++I E+ S L + YG Y+ + ++G P + I+ ++
Sbjct: 177 RVVQTCVKFGSKQQRETICA-ELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMY 235
Query: 919 GQIVQMSQQKFASNVIEKCL-SFGTPAERQALVNEMLG 955
G +V+M + + A+ V+E F +++AL+ E G
Sbjct: 236 GNVVKMIRHREAAYVVEDAFREFTNLQQQRALICEFYG 273
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
SR +Q ++ + +++ + E+ + L +G Y+ K F++GT + ++
Sbjct: 176 SRVVQTCVKFGSKQQRETICAELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMY 235
Query: 774 GHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECV 832
G+V+ + V++ A E L QQ ++ E G + +D+ + I K +
Sbjct: 236 GNVVKMIRHREAAYVVEDAFREFTNLQQQRALICEFYGPEFQVFKDRTQDIHIDKLLIDH 295
Query: 833 PE 834
PE
Sbjct: 296 PE 297
>sp|Q92347|NOP9_SCHPO Nucleolar protein 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nop9 PE=3 SV=1
Length = 655
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 732 VFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQK 791
+++E+ + L + +VFG+ V++K F T+ Q++ L GH + L +G +K
Sbjct: 93 IYREVQGKELIVCNNVFGSKVLEKLFPLSTSRQIKSFFSALNGHYVELIQTTFGSYAFEK 152
Query: 792 AIE--VVELDQQTQMVKE 807
+ L+ +TQ V E
Sbjct: 153 LLSHMAAILNLETQGVTE 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370,741,956
Number of Sequences: 539616
Number of extensions: 17131942
Number of successful extensions: 58459
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 354
Number of HSP's that attempted gapping in prelim test: 51087
Number of HSP's gapped (non-prelim): 5401
length of query: 967
length of database: 191,569,459
effective HSP length: 127
effective length of query: 840
effective length of database: 123,038,227
effective search space: 103352110680
effective search space used: 103352110680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)