Query 002105
Match_columns 966
No_of_seqs 1009 out of 6286
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002105.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002105hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.5E-81 1.2E-85 776.6 45.2 584 17-605 8-749 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.4E-65 8.1E-70 634.6 35.9 517 83-602 75-720 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-57 4.1E-62 560.0 46.3 535 62-597 26-620 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 3E-56 1E-60 547.5 43.4 520 61-581 49-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 1.9E-56 6.5E-61 541.9 37.4 512 63-581 35-565 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 5.7E-56 2E-60 556.1 40.7 518 50-582 14-566 (844)
7 4eco_A Uncharacterized protein 100.0 8.4E-58 2.9E-62 554.0 20.3 496 20-553 29-601 (636)
8 4ecn_A Leucine-rich repeat pro 100.0 1.1E-56 3.6E-61 552.7 24.3 514 17-576 265-864 (876)
9 3t6q_A CD180 antigen; protein- 100.0 3.6E-55 1.2E-59 530.6 34.4 489 61-556 57-564 (606)
10 3vq2_A TLR4, TOLL-like recepto 100.0 7.8E-55 2.7E-59 527.7 33.2 510 62-583 33-565 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-53 3.9E-58 517.5 33.5 485 60-556 55-562 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.5E-52 8.5E-57 523.1 43.7 514 65-596 8-557 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 2.6E-49 9E-54 475.6 35.9 486 87-585 9-540 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1E-49 3.6E-54 476.9 28.5 490 49-582 3-516 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 4.7E-49 1.6E-53 473.5 31.3 486 62-557 29-536 (570)
16 4eco_A Uncharacterized protein 100.0 2.4E-50 8.3E-55 488.6 18.2 448 111-578 82-602 (636)
17 2z81_A CD282 antigen, TOLL-lik 100.0 5.3E-49 1.8E-53 470.7 26.6 474 88-598 8-509 (549)
18 4aoj_A High affinity nerve gro 100.0 9.9E-49 3.4E-53 431.3 21.2 241 689-952 47-319 (329)
19 4asz_A BDNF/NT-3 growth factor 100.0 5E-49 1.7E-53 427.7 16.8 242 689-953 19-290 (299)
20 4gt4_A Tyrosine-protein kinase 100.0 1.7E-48 5.7E-53 425.4 18.2 240 687-949 30-303 (308)
21 4ecn_A Leucine-rich repeat pro 100.0 3.3E-47 1.1E-51 468.4 28.0 437 132-579 323-843 (876)
22 2z7x_B TOLL-like receptor 1, v 100.0 8E-48 2.8E-52 457.2 21.5 451 88-581 3-486 (520)
23 3omv_A RAF proto-oncogene seri 100.0 2.5E-47 8.6E-52 414.1 19.9 243 688-953 41-300 (307)
24 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-46 4.2E-51 447.0 27.2 452 64-556 3-485 (520)
25 3hmm_A TGF-beta receptor type- 100.0 3.7E-47 1.3E-51 415.9 19.1 249 690-952 10-297 (303)
26 4fih_A Serine/threonine-protei 100.0 1.6E-46 5.6E-51 412.6 22.1 240 685-945 76-323 (346)
27 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-46 8.3E-51 410.1 23.1 242 687-953 62-317 (336)
28 4g8a_A TOLL-like receptor 4; l 100.0 2E-45 6.8E-50 447.6 33.6 509 62-580 53-584 (635)
29 3fpq_A Serine/threonine-protei 100.0 1.3E-46 4.5E-51 405.5 20.4 237 690-945 33-282 (290)
30 4b9d_A Serine/threonine-protei 100.0 4.6E-46 1.6E-50 409.7 18.8 238 685-945 26-276 (350)
31 4ase_A Vascular endothelial gr 100.0 3.6E-46 1.2E-50 414.1 16.5 247 686-953 67-348 (353)
32 4fie_A Serine/threonine-protei 100.0 2.5E-45 8.7E-50 413.1 22.5 240 685-945 153-400 (423)
33 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.8E-45 1.3E-49 395.7 16.9 236 685-944 34-283 (311)
34 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.5E-44 1.2E-48 429.7 23.8 454 85-582 31-516 (562)
35 3hyh_A Carbon catabolite-derep 100.0 3.8E-44 1.3E-48 382.8 20.7 236 685-945 15-262 (275)
36 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-42 5.1E-47 422.2 37.3 516 70-598 40-579 (635)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.7E-43 9.2E-48 422.0 28.6 450 64-556 34-514 (562)
38 3ubd_A Ribosomal protein S6 ki 100.0 2.8E-44 9.5E-49 389.2 16.5 232 685-940 26-271 (304)
39 4g31_A Eukaryotic translation 100.0 9.4E-44 3.2E-48 387.0 15.1 236 685-945 7-279 (299)
40 1ogq_A PGIP-2, polygalacturona 100.0 8E-42 2.7E-46 377.2 19.1 290 17-311 2-302 (313)
41 1jl5_A Outer protein YOPM; leu 100.0 4.5E-41 1.5E-45 389.8 25.8 266 110-410 11-291 (454)
42 3v47_A TOLL-like receptor 5B a 100.0 2E-40 6.9E-45 386.7 29.6 363 85-462 30-413 (455)
43 1jl5_A Outer protein YOPM; leu 100.0 1.8E-40 6.2E-45 384.7 27.3 418 62-581 12-434 (454)
44 3v47_A TOLL-like receptor 5B a 100.0 2.6E-40 8.9E-45 385.7 28.8 383 183-585 13-417 (455)
45 4f9c_A Cell division cycle 7-r 100.0 2.4E-40 8.3E-45 370.0 22.5 191 685-881 23-251 (361)
46 3bz5_A Internalin-J, INLJ; leu 100.0 2.7E-39 9.4E-44 375.1 30.2 363 75-535 32-394 (457)
47 4b99_A Mitogen-activated prote 100.0 9.2E-40 3.1E-44 369.1 21.1 252 685-945 56-344 (398)
48 3uto_A Twitchin; kinase, muscl 100.0 6E-40 2E-44 389.1 18.9 243 685-945 159-410 (573)
49 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-38 4.7E-43 369.2 29.5 354 129-557 39-392 (457)
50 3v5w_A G-protein coupled recep 100.0 1.8E-39 6.3E-44 381.0 20.8 239 685-944 191-448 (689)
51 2qkw_B Protein kinase; three-h 100.0 5.2E-39 1.8E-43 356.6 20.0 260 686-954 42-317 (321)
52 3uim_A Brassinosteroid insensi 100.0 8.1E-39 2.8E-43 355.8 21.0 272 672-949 18-308 (326)
53 1o6v_A Internalin A; bacterial 100.0 3.8E-37 1.3E-41 359.7 28.9 344 110-529 46-389 (466)
54 3s95_A LIMK-1, LIM domain kina 100.0 4.9E-38 1.7E-42 346.9 20.1 238 687-949 14-279 (310)
55 3fxz_A Serine/threonine-protei 100.0 1.5E-37 5E-42 340.7 21.1 239 686-945 23-269 (297)
56 2c30_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 343.1 22.5 254 672-946 23-295 (321)
57 1o6v_A Internalin A; bacterial 100.0 2E-36 6.9E-41 353.6 31.2 347 82-458 43-389 (466)
58 3p86_A Serine/threonine-protei 100.0 4.3E-37 1.5E-41 338.7 22.0 246 686-953 40-299 (309)
59 3soc_A Activin receptor type-2 100.0 1.8E-37 6.2E-42 344.2 17.6 255 685-951 26-317 (322)
60 2nru_A Interleukin-1 receptor- 100.0 1.4E-36 4.6E-41 334.8 24.0 265 672-949 13-303 (307)
61 2psq_A Fibroblast growth facto 100.0 1.2E-36 4.2E-41 343.8 21.6 245 686-952 84-364 (370)
62 3kul_A Ephrin type-A receptor 100.0 6.1E-37 2.1E-41 340.2 18.5 247 686-955 52-316 (325)
63 2yab_A Death-associated protei 100.0 1.2E-36 4.2E-41 341.7 21.0 242 686-945 15-272 (361)
64 2id5_A Lingo-1, leucine rich r 100.0 1E-35 3.4E-40 349.1 29.6 303 132-434 32-334 (477)
65 3l9p_A Anaplastic lymphoma kin 100.0 4.6E-37 1.6E-41 347.1 17.5 247 686-953 74-346 (367)
66 4fvq_A Tyrosine-protein kinase 100.0 1.9E-37 6.4E-42 338.5 13.8 251 687-959 12-282 (289)
67 3zgw_A Maternal embryonic leuc 100.0 1.7E-36 5.9E-41 338.3 21.7 236 686-945 13-260 (347)
68 2x4f_A Myosin light chain kina 100.0 1.3E-36 4.4E-41 343.7 20.2 239 689-945 95-342 (373)
69 3q4u_A Activin receptor type-1 100.0 1.3E-36 4.5E-41 333.8 19.8 251 686-949 11-299 (301)
70 2qol_A Ephrin receptor; recept 100.0 4.6E-37 1.6E-41 347.5 16.3 246 686-954 48-311 (373)
71 3op5_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 343.7 19.6 256 685-953 37-330 (364)
72 3fe3_A MAP/microtubule affinit 100.0 2.7E-37 9.3E-42 342.8 14.1 237 685-945 17-264 (328)
73 2id5_A Lingo-1, leucine rich r 100.0 5.4E-36 1.9E-40 351.4 25.8 321 135-458 14-334 (477)
74 1tki_A Titin; serine kinase, m 100.0 1.3E-36 4.3E-41 336.8 19.2 240 687-945 9-257 (321)
75 3cbl_A C-FES, proto-oncogene t 100.0 6.5E-37 2.2E-41 347.3 16.7 242 686-950 117-372 (377)
76 3c0i_A Peripheral plasma membr 100.0 3E-36 1E-40 338.3 21.9 241 686-945 27-286 (351)
77 1csn_A Casein kinase-1; phosph 100.0 8.8E-36 3E-40 326.7 25.1 251 686-953 13-284 (298)
78 2y0a_A Death-associated protei 100.0 2.4E-36 8.3E-41 335.5 20.9 241 687-945 15-271 (326)
79 4eqm_A Protein kinase; transfe 100.0 2E-36 6.8E-41 331.2 19.8 250 686-954 14-277 (294)
80 4f0f_A Serine/threonine-protei 100.0 5.4E-36 1.9E-40 326.6 22.7 246 686-949 22-286 (287)
81 1kob_A Twitchin; kinase, intra 100.0 1.2E-36 4.2E-41 344.8 17.9 243 685-945 53-304 (387)
82 2izr_A Casein kinase I isoform 100.0 3.5E-36 1.2E-40 335.1 21.2 249 686-953 12-282 (330)
83 1o6l_A RAC-beta serine/threoni 100.0 5.3E-36 1.8E-40 333.4 22.4 237 685-945 7-260 (337)
84 2eva_A TAK1 kinase - TAB1 chim 100.0 4.6E-36 1.6E-40 330.5 21.4 243 687-952 12-263 (307)
85 4dc2_A Protein kinase C IOTA t 100.0 7.8E-36 2.7E-40 338.1 23.1 239 685-940 54-307 (396)
86 3ugc_A Tyrosine-protein kinase 100.0 1.4E-36 4.8E-41 332.7 16.4 249 686-951 13-290 (295)
87 3vhe_A Vascular endothelial gr 100.0 1.1E-36 3.9E-41 343.3 16.1 246 686-952 25-355 (359)
88 2bdw_A Hypothetical protein K1 100.0 2.9E-36 9.9E-41 339.5 19.0 242 686-945 32-284 (362)
89 1nxk_A MAP kinase-activated pr 100.0 3.6E-36 1.2E-40 343.4 20.0 237 690-946 69-322 (400)
90 4hcu_A Tyrosine-protein kinase 100.0 4E-36 1.4E-40 324.4 19.3 240 686-950 13-264 (269)
91 3uc3_A Serine/threonine-protei 100.0 5.7E-36 1.9E-40 337.2 20.9 244 685-945 22-274 (361)
92 3kmu_A ILK, integrin-linked ki 100.0 1.6E-36 5.4E-41 327.6 15.6 243 686-949 13-267 (271)
93 3soa_A Calcium/calmodulin-depe 100.0 4.9E-36 1.7E-40 345.7 20.6 242 686-945 14-267 (444)
94 3poz_A Epidermal growth factor 100.0 2.2E-36 7.4E-41 336.2 16.7 244 685-952 17-278 (327)
95 3tki_A Serine/threonine-protei 100.0 2.6E-36 9E-41 334.7 17.2 240 686-946 10-262 (323)
96 1xjd_A Protein kinase C, theta 100.0 4E-36 1.4E-40 335.3 18.8 237 685-944 19-268 (345)
97 2ac3_A MAP kinase-interacting 100.0 7.1E-36 2.4E-40 330.5 20.6 244 690-945 20-295 (316)
98 3p1a_A MYT1 kinase, membrane-a 100.0 6.4E-36 2.2E-40 329.9 20.2 235 685-945 59-304 (311)
99 1qcf_A Haematopoetic cell kina 100.0 5.4E-36 1.9E-40 348.2 20.6 240 687-952 192-444 (454)
100 2w4o_A Calcium/calmodulin-depe 100.0 5.3E-36 1.8E-40 335.9 19.7 240 687-945 57-305 (349)
101 4euu_A Serine/threonine-protei 100.0 2.3E-35 7.8E-40 326.9 24.5 258 687-949 13-306 (319)
102 2v62_A Serine/threonine-protei 100.0 3E-36 1E-40 337.8 17.5 252 685-949 39-325 (345)
103 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.8E-36 2E-40 322.9 19.0 242 686-953 11-264 (268)
104 1opk_A P150, C-ABL, proto-onco 100.0 3.3E-36 1.1E-40 353.4 18.4 244 686-953 223-479 (495)
105 3tt0_A Basic fibroblast growth 100.0 1.1E-35 3.8E-40 337.9 21.1 245 687-953 73-353 (382)
106 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-36 1.1E-40 337.3 16.5 234 684-940 24-269 (353)
107 3gen_A Tyrosine-protein kinase 100.0 8.9E-36 3.1E-40 324.2 19.0 244 685-953 26-281 (283)
108 3kn6_A Ribosomal protein S6 ki 100.0 6.8E-36 2.3E-40 331.7 18.3 241 690-945 18-270 (325)
109 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-35 4E-40 344.8 21.0 238 686-950 196-443 (450)
110 2qr7_A Ribosomal protein S6 ki 100.0 8.9E-36 3.1E-40 332.6 19.2 241 686-945 25-277 (342)
111 1fot_A TPK1 delta, CAMP-depend 100.0 2.5E-35 8.4E-40 325.6 22.3 235 686-944 9-257 (318)
112 3lxl_A Tyrosine-protein kinase 100.0 3.4E-37 1.2E-41 342.9 7.0 253 684-954 24-305 (327)
113 3kex_A Receptor tyrosine-prote 100.0 1.1E-35 3.6E-40 330.4 18.6 244 685-952 15-276 (325)
114 2jii_A Serine/threonine-protei 100.0 1E-35 3.5E-40 334.4 18.4 251 686-954 45-338 (352)
115 3v8s_A RHO-associated protein 100.0 1.2E-35 4E-40 338.6 19.0 242 684-945 70-329 (410)
116 4fr4_A YANK1, serine/threonine 100.0 3.3E-35 1.1E-39 331.9 22.5 238 685-944 17-270 (384)
117 2r5t_A Serine/threonine-protei 100.0 1.2E-35 4.1E-40 334.9 18.9 239 685-946 40-290 (373)
118 2pvf_A Fibroblast growth facto 100.0 1.2E-35 4E-40 331.5 18.6 258 686-965 38-331 (334)
119 3a8x_A Protein kinase C IOTA t 100.0 2.2E-35 7.7E-40 329.8 20.8 238 686-940 12-264 (345)
120 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.8E-36 2E-40 332.7 15.9 235 686-945 12-258 (336)
121 3hko_A Calcium/calmodulin-depe 100.0 8.8E-36 3E-40 334.1 17.3 242 686-945 29-330 (345)
122 2zv2_A Calcium/calmodulin-depe 100.0 2E-35 6.8E-40 324.0 19.6 239 685-945 15-292 (298)
123 2buj_A Serine/threonine-protei 100.0 9.3E-36 3.2E-40 329.7 17.0 248 685-954 31-307 (317)
124 3dtc_A Mitogen-activated prote 100.0 6.7E-36 2.3E-40 322.9 15.4 244 687-949 11-270 (271)
125 1x8b_A WEE1HU, WEE1-like prote 100.0 2.2E-35 7.6E-40 321.6 19.7 237 686-945 14-279 (289)
126 1luf_A Muscle-specific tyrosin 100.0 8.5E-36 2.9E-40 333.9 16.8 245 686-953 50-336 (343)
127 3lb7_A RAF proto-oncogene seri 100.0 1.7E-35 5.7E-40 325.9 18.5 243 686-950 39-298 (307)
128 2i0e_A Protein kinase C-beta I 100.0 1.8E-35 6.2E-40 331.1 18.9 234 684-940 21-266 (353)
129 2a2a_A Death-associated protei 100.0 4.3E-35 1.5E-39 325.0 21.7 241 687-945 16-272 (321)
130 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.7E-35 1.3E-39 328.5 21.2 235 686-944 44-292 (350)
131 2pmi_A Negative RE, cyclin-dep 100.0 8.3E-35 2.8E-39 322.0 23.7 251 686-945 8-293 (317)
132 3mdy_A Bone morphogenetic prot 100.0 7E-35 2.4E-39 325.5 23.0 255 685-952 39-331 (337)
133 1t46_A HOMO sapiens V-KIT hard 100.0 1.7E-35 5.7E-40 327.0 17.7 248 686-954 26-309 (313)
134 2ivs_A Proto-oncogene tyrosine 100.0 2.3E-35 7.8E-40 326.0 18.8 243 687-952 27-311 (314)
135 3qd2_B Eukaryotic translation 100.0 5.5E-35 1.9E-39 325.5 22.0 235 686-945 9-325 (332)
136 3o0g_A Cell division protein k 100.0 4.4E-35 1.5E-39 320.3 20.8 252 686-945 5-282 (292)
137 2wqm_A Serine/threonine-protei 100.0 3E-35 1E-39 324.6 19.4 244 686-949 35-294 (310)
138 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-35 6.2E-40 343.4 18.4 243 688-956 189-444 (452)
139 1rjb_A FL cytokine receptor; k 100.0 2.6E-35 8.9E-40 330.1 18.9 248 685-953 47-335 (344)
140 3dls_A PAS domain-containing s 100.0 3.3E-35 1.1E-39 327.5 19.6 232 685-946 26-275 (335)
141 2yfx_A Tyrosine-protein kinase 100.0 2E-35 6.9E-40 328.5 17.5 248 685-953 32-305 (327)
142 3is5_A Calcium-dependent prote 100.0 3.7E-35 1.3E-39 319.6 19.1 239 687-945 26-278 (285)
143 3o6n_A APL1; leucine-rich repe 100.0 2.2E-34 7.6E-39 328.4 26.1 348 40-434 3-353 (390)
144 3niz_A Rhodanese family protei 100.0 9.2E-35 3.1E-39 320.6 22.1 250 686-945 24-300 (311)
145 1u5q_A Serine/threonine protei 100.0 3.7E-35 1.3E-39 328.6 19.1 237 686-946 57-306 (348)
146 3gni_B Strad alpha; kinase fol 100.0 3.7E-35 1.3E-39 334.7 19.4 189 686-880 28-240 (389)
147 4aw2_A Serine/threonine-protei 100.0 4.5E-35 1.5E-39 336.3 20.1 242 685-945 76-338 (437)
148 3qup_A Tyrosine-protein kinase 100.0 1.9E-35 6.3E-40 328.2 16.3 246 686-954 26-300 (323)
149 4eut_A Serine/threonine-protei 100.0 4.2E-35 1.4E-39 334.7 19.5 260 687-952 13-309 (396)
150 4e5w_A Tyrosine-protein kinase 100.0 6.2E-35 2.1E-39 320.7 19.4 248 686-951 24-301 (302)
151 3kk8_A Calcium/calmodulin depe 100.0 9.5E-35 3.2E-39 316.2 20.7 242 686-945 9-261 (284)
152 3oja_B Anopheles plasmodium-re 100.0 3.2E-34 1.1E-38 345.3 27.4 347 39-435 8-360 (597)
153 1b6c_B TGF-B superfamily recep 100.0 8.1E-35 2.8E-39 325.8 20.6 254 686-952 45-336 (342)
154 4ejn_A RAC-alpha serine/threon 100.0 3.7E-35 1.3E-39 340.7 18.3 238 685-945 150-404 (446)
155 3f3z_A Calcium/calmodulin-depe 100.0 6.1E-35 2.1E-39 316.5 18.8 239 688-945 14-261 (277)
156 2a19_B Interferon-induced, dou 100.0 5.8E-35 2E-39 317.7 18.7 236 686-954 14-275 (284)
157 2i1m_A Macrophage colony-stimu 100.0 3.4E-35 1.2E-39 327.6 17.2 246 685-951 48-325 (333)
158 2h34_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 319.5 21.4 248 686-954 37-298 (309)
159 3g2f_A Bone morphogenetic prot 100.0 1.1E-35 3.9E-40 331.8 13.2 257 686-953 16-319 (336)
160 3bhy_A Death-associated protei 100.0 1E-34 3.4E-39 315.8 20.3 245 687-949 9-271 (283)
161 3gxj_A TGF-beta receptor type- 100.0 6.1E-37 2.1E-41 336.7 2.7 253 687-952 7-297 (303)
162 3a62_A Ribosomal protein S6 ki 100.0 1.4E-34 4.7E-39 321.6 21.4 236 685-944 19-275 (327)
163 3llt_A Serine/threonine kinase 100.0 9.2E-35 3.1E-39 327.9 20.2 190 685-880 37-262 (360)
164 2vd5_A DMPK protein; serine/th 100.0 7.5E-35 2.6E-39 332.1 19.6 241 685-945 63-327 (412)
165 3fdn_A Serine/threonine-protei 100.0 1.2E-34 4.3E-39 314.4 20.5 237 686-946 12-258 (279)
166 3t9t_A Tyrosine-protein kinase 100.0 7.5E-35 2.6E-39 313.9 18.5 239 687-950 12-262 (267)
167 1mqb_A Ephrin type-A receptor 100.0 1.1E-34 3.9E-39 323.1 20.5 245 688-955 49-312 (333)
168 3cok_A Serine/threonine-protei 100.0 4E-35 1.4E-39 318.1 16.1 235 687-945 15-262 (278)
169 2ozo_A Tyrosine-protein kinase 100.0 7.2E-35 2.5E-39 350.1 20.0 240 690-953 343-599 (613)
170 3i6u_A CDS1, serine/threonine- 100.0 4.7E-35 1.6E-39 336.5 17.6 242 686-945 138-399 (419)
171 2acx_A G protein-coupled recep 100.0 7.8E-35 2.7E-39 342.0 19.7 237 686-944 187-443 (576)
172 1ob3_A PFPK5, cell division co 100.0 8.7E-35 3E-39 317.2 18.7 246 687-945 6-280 (288)
173 3ork_A Serine/threonine protei 100.0 2E-35 7E-40 326.0 13.6 244 686-949 15-278 (311)
174 2y94_A 5'-AMP-activated protei 100.0 3.8E-35 1.3E-39 340.4 16.5 235 687-945 20-266 (476)
175 2jam_A Calcium/calmodulin-depe 100.0 2.5E-34 8.7E-39 316.2 22.2 241 687-945 13-261 (304)
176 1mp8_A Focal adhesion kinase 1 100.0 3.5E-35 1.2E-39 319.1 15.2 243 686-952 18-276 (281)
177 3kfa_A Tyrosine-protein kinase 100.0 5.6E-35 1.9E-39 318.7 16.7 244 686-953 16-272 (288)
178 4fl3_A Tyrosine-protein kinase 100.0 5.1E-35 1.7E-39 352.2 17.8 239 690-952 376-631 (635)
179 1qpc_A LCK kinase; alpha beta 100.0 1.4E-34 4.7E-39 314.1 19.5 243 686-954 16-271 (279)
180 2clq_A Mitogen-activated prote 100.0 1.5E-34 5E-39 316.5 19.9 238 688-945 27-278 (295)
181 3c1x_A Hepatocyte growth facto 100.0 8.2E-35 2.8E-39 328.7 18.3 242 689-953 95-356 (373)
182 2zmd_A Dual specificity protei 100.0 9.4E-35 3.2E-39 330.6 18.9 238 685-945 58-320 (390)
183 3lm5_A Serine/threonine-protei 100.0 4.1E-35 1.4E-39 325.9 15.6 240 689-945 35-287 (327)
184 2h8h_A Proto-oncogene tyrosine 100.0 5.4E-35 1.8E-39 346.2 17.5 244 687-956 271-527 (535)
185 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6E-35 2E-39 329.9 17.1 239 686-953 68-340 (365)
186 3g33_A Cell division protein k 100.0 3.8E-34 1.3E-38 315.4 23.1 253 685-945 11-296 (308)
187 3lij_A Calcium/calmodulin depe 100.0 2.1E-34 7.2E-39 338.7 22.1 241 686-945 40-291 (494)
188 3ttj_A Mitogen-activated prote 100.0 6E-35 2.1E-39 339.3 17.3 253 685-945 64-355 (464)
189 3dbq_A Dual specificity protei 100.0 5.5E-35 1.9E-39 327.2 16.2 238 685-946 11-274 (343)
190 3pls_A Macrophage-stimulating 100.0 1.8E-34 6.1E-39 316.3 19.9 243 689-953 27-288 (298)
191 2xir_A Vascular endothelial gr 100.0 4.4E-35 1.5E-39 324.0 15.1 246 686-952 30-310 (316)
192 3ll6_A Cyclin G-associated kin 100.0 1E-34 3.5E-39 324.1 18.1 243 686-952 31-308 (337)
193 1t4h_A Serine/threonine-protei 100.0 2.3E-34 8E-39 314.2 20.5 238 689-945 32-282 (290)
194 3fme_A Dual specificity mitoge 100.0 5.2E-35 1.8E-39 319.2 15.1 241 685-945 9-266 (290)
195 1fvr_A Tyrosine-protein kinase 100.0 1.8E-34 6.1E-39 320.9 19.7 246 686-953 28-301 (327)
196 4hgt_A Casein kinase I isoform 100.0 6.1E-34 2.1E-38 311.7 23.6 249 686-953 12-281 (296)
197 3uzp_A CKI-delta, CKID, casein 100.0 6.2E-34 2.1E-38 311.7 23.5 250 686-954 12-282 (296)
198 2yex_A Serine/threonine-protei 100.0 1.7E-34 5.8E-39 312.7 18.7 238 687-945 11-261 (276)
199 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-34 8.1E-39 337.3 21.1 236 686-941 188-439 (543)
200 3lzb_A Epidermal growth factor 100.0 1.4E-34 4.8E-39 321.5 18.2 245 684-952 16-278 (327)
201 4agu_A Cyclin-dependent kinase 100.0 1.5E-34 5.2E-39 319.0 18.3 252 686-945 6-284 (311)
202 3nsz_A CK II alpha, casein kin 100.0 2.3E-34 8E-39 320.4 20.0 250 686-945 39-319 (330)
203 2eue_A Carbon catabolite derep 100.0 2.1E-34 7.3E-39 311.9 19.1 236 685-945 15-262 (275)
204 1xbb_A Tyrosine-protein kinase 100.0 1.6E-34 5.4E-39 315.7 18.1 240 690-953 24-280 (291)
205 3an0_A Dual specificity mitoge 100.0 6.8E-35 2.3E-39 326.2 15.6 241 685-945 53-310 (340)
206 3mwu_A Calmodulin-domain prote 100.0 2.9E-34 9.9E-39 336.9 21.1 241 686-945 25-276 (486)
207 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-34 5.2E-39 321.6 17.7 253 685-945 36-318 (329)
208 3brb_A Proto-oncogene tyrosine 100.0 2.4E-34 8.1E-39 317.8 19.0 244 687-953 38-309 (313)
209 2j7t_A Serine/threonine-protei 100.0 2.1E-34 7.2E-39 316.4 18.5 239 686-945 22-275 (302)
210 3mtl_A Cell division protein k 100.0 2.5E-34 8.4E-39 319.2 19.2 250 687-945 6-281 (324)
211 3oz6_A Mitogen-activated prote 100.0 8.3E-35 2.8E-39 331.6 15.7 190 685-880 11-234 (388)
212 2vgo_A Serine/threonine-protei 100.0 4.1E-34 1.4E-38 311.2 20.5 236 686-945 17-262 (284)
213 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-34 6.1E-39 315.0 17.4 244 686-951 27-287 (289)
214 3pfq_A PKC-B, PKC-beta, protei 100.0 3.8E-34 1.3E-38 346.9 22.2 235 683-940 341-587 (674)
215 2w5a_A Serine/threonine-protei 100.0 8.6E-35 2.9E-39 315.6 14.8 244 686-949 9-271 (279)
216 2vwi_A Serine/threonine-protei 100.0 8.1E-35 2.8E-39 319.8 14.6 247 685-945 17-287 (303)
217 3f66_A Hepatocyte growth facto 100.0 1.7E-34 6E-39 316.5 17.2 243 688-953 30-292 (298)
218 2rku_A Serine/threonine-protei 100.0 4.4E-34 1.5E-38 312.7 20.0 237 686-946 18-266 (294)
219 1u59_A Tyrosine-protein kinase 100.0 3E-34 1E-38 312.9 18.6 240 690-953 17-273 (287)
220 1p4o_A Insulin-like growth fac 100.0 1.5E-34 5.3E-39 320.7 16.5 245 686-953 28-300 (322)
221 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-34 7.4E-39 320.1 17.7 248 686-950 44-320 (326)
222 2ycf_A Serine/threonine-protei 100.0 4.4E-34 1.5E-38 317.0 20.0 242 686-945 13-274 (322)
223 3byv_A Rhoptry kinase; malaria 100.0 2.3E-35 7.8E-40 334.7 9.8 229 687-945 77-359 (377)
224 1byg_A CSK, protein (C-termina 100.0 1.7E-34 6E-39 313.1 16.2 239 686-952 24-272 (278)
225 3mi9_A Cell division protein k 100.0 1.6E-33 5.5E-38 316.5 24.6 252 685-945 19-311 (351)
226 3a7i_A MST3 kinase, serine/thr 100.0 5.9E-34 2E-38 313.1 20.4 238 686-946 25-271 (303)
227 3q5i_A Protein kinase; CDPK, m 100.0 4.3E-34 1.5E-38 336.9 20.6 242 685-945 38-301 (504)
228 2vx3_A Dual specificity tyrosi 100.0 1E-33 3.4E-38 321.8 22.6 193 685-880 56-261 (382)
229 3kvw_A DYRK2, dual specificity 100.0 4.7E-34 1.6E-38 329.0 19.9 191 685-880 99-302 (429)
230 3cc6_A Protein tyrosine kinase 100.0 3.9E-34 1.3E-38 310.9 18.1 242 687-952 16-273 (281)
231 3oja_B Anopheles plasmodium-re 100.0 8.3E-34 2.8E-38 341.7 22.8 333 227-601 50-383 (597)
232 2owb_A Serine/threonine-protei 100.0 4.6E-34 1.6E-38 318.6 19.0 236 686-945 44-291 (335)
233 3nyv_A Calmodulin-domain prote 100.0 2.4E-34 8.1E-39 337.8 17.5 241 686-945 29-281 (484)
234 1vzo_A Ribosomal protein S6 ki 100.0 5.6E-34 1.9E-38 320.4 19.6 243 685-946 56-322 (355)
235 3fhr_A MAP kinase-activated pr 100.0 2.3E-34 8E-39 321.0 16.2 237 691-945 37-287 (336)
236 3sv0_A Casein kinase I-like; t 100.0 2.2E-33 7.5E-38 326.2 24.9 249 686-952 10-278 (483)
237 3com_A Serine/threonine-protei 100.0 1.6E-33 5.4E-38 311.3 22.6 238 685-945 31-278 (314)
238 4aaa_A Cyclin-dependent kinase 100.0 4E-34 1.4E-38 318.6 17.7 254 685-945 27-306 (331)
239 3eqc_A Dual specificity mitoge 100.0 3.9E-34 1.3E-38 322.7 17.9 190 686-880 36-233 (360)
240 3lxp_A Non-receptor tyrosine-p 100.0 2.3E-35 7.9E-40 326.6 7.0 248 686-951 34-309 (318)
241 2y7j_A Phosphorylase B kinase 100.0 2E-33 6.9E-38 317.0 22.8 241 686-945 97-359 (365)
242 3q60_A ROP5B; pseudokinase, tr 100.0 1E-34 3.6E-39 328.7 12.2 245 686-945 65-352 (371)
243 1j1b_A Glycogen synthase kinas 100.0 1.2E-33 4.2E-38 324.7 20.4 248 685-945 56-336 (420)
244 3rp9_A Mitogen-activated prote 100.0 2.9E-34 9.8E-39 334.6 15.0 182 685-873 55-280 (458)
245 1ua2_A CAK, cell division prot 100.0 6.5E-34 2.2E-38 318.9 17.2 252 686-946 13-292 (346)
246 3eb0_A Putative uncharacterize 100.0 1.4E-33 4.8E-38 320.7 20.2 247 685-944 9-320 (383)
247 1cm8_A Phosphorylated MAP kina 100.0 1.7E-33 5.7E-38 317.8 20.3 250 685-945 27-307 (367)
248 2h6d_A 5'-AMP-activated protei 100.0 1.7E-33 5.7E-38 305.0 19.2 236 687-946 15-262 (276)
249 3o6n_A APL1; leucine-rich repe 100.0 3.7E-33 1.3E-37 318.3 23.0 311 227-578 44-354 (390)
250 2rio_A Serine/threonine-protei 100.0 8E-34 2.7E-38 327.8 17.4 235 690-945 22-295 (434)
251 3rgf_A Cyclin-dependent kinase 100.0 1.4E-33 4.7E-38 323.4 19.1 184 690-880 28-239 (405)
252 1u46_A ACK-1, activated CDC42 100.0 9.9E-34 3.4E-38 309.2 17.1 242 685-949 20-281 (291)
253 1wak_A Serine/threonine-protei 100.0 9.1E-34 3.1E-38 324.1 17.5 256 685-945 39-391 (397)
254 2xrw_A Mitogen-activated prote 100.0 2.1E-33 7.2E-38 317.8 19.5 253 685-945 27-318 (371)
255 2r3i_A Cell division protein k 100.0 2.8E-33 9.6E-38 307.0 19.0 251 687-945 7-283 (299)
256 1phk_A Phosphorylase kinase; g 100.0 3.2E-33 1.1E-37 306.4 19.5 241 686-945 20-283 (298)
257 3qyz_A Mitogen-activated prote 100.0 3.8E-33 1.3E-37 314.9 20.4 252 685-945 29-313 (364)
258 3n9x_A Phosphotransferase; mal 100.0 3.1E-33 1.1E-37 322.8 19.6 187 685-878 28-253 (432)
259 2wei_A Calmodulin-domain prote 100.0 2.7E-33 9.1E-38 305.3 17.9 242 685-945 24-276 (287)
260 4fmz_A Internalin; leucine ric 100.0 2.4E-32 8.2E-37 306.4 26.1 307 81-433 40-346 (347)
261 4fmz_A Internalin; leucine ric 100.0 2.7E-32 9.2E-37 306.0 26.5 305 108-457 42-346 (347)
262 2x7f_A TRAF2 and NCK-interacti 100.0 4.7E-33 1.6E-37 309.3 20.1 238 686-945 27-286 (326)
263 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.5E-33 5E-38 312.3 15.8 240 686-952 36-302 (319)
264 3aln_A Dual specificity mitoge 100.0 1.1E-33 3.7E-38 314.5 14.7 243 686-945 25-285 (327)
265 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-33 4.5E-38 316.7 15.3 253 685-945 33-322 (348)
266 3p23_A Serine/threonine-protei 100.0 3.2E-33 1.1E-37 321.7 18.7 235 687-944 28-282 (432)
267 1z57_A Dual specificity protei 100.0 4.1E-33 1.4E-37 311.2 18.8 251 686-945 17-328 (339)
268 1blx_A Cyclin-dependent kinase 100.0 1.4E-32 4.7E-37 305.4 23.0 250 685-945 13-296 (326)
269 2i6l_A Mitogen-activated prote 100.0 3.1E-33 1.1E-37 309.6 17.6 252 686-945 14-305 (320)
270 4fcg_A Uncharacterized protein 100.0 1.9E-33 6.5E-38 312.0 15.9 276 17-335 23-312 (328)
271 3e3p_A Protein kinase, putativ 100.0 5.6E-33 1.9E-37 313.2 19.8 254 685-945 25-314 (360)
272 2wtk_C Serine/threonine-protei 100.0 8.4E-33 2.9E-37 304.1 20.7 236 686-946 8-264 (305)
273 2dyl_A Dual specificity mitoge 100.0 4.2E-33 1.4E-37 308.4 17.8 241 686-945 28-283 (318)
274 1zy4_A Serine/threonine-protei 100.0 1.5E-33 5.2E-38 309.4 13.8 237 686-945 9-283 (303)
275 4e7w_A Glycogen synthase kinas 100.0 6.5E-33 2.2E-37 316.1 19.1 248 685-945 42-321 (394)
276 1q8y_A SR protein kinase; tran 100.0 2.1E-33 7.4E-38 318.2 15.0 257 685-945 21-333 (373)
277 3a99_A Proto-oncogene serine/t 100.0 2.7E-33 9.2E-38 310.3 15.5 232 686-945 46-293 (320)
278 2fst_X Mitogen-activated prote 100.0 2.1E-33 7.3E-38 316.6 14.9 252 685-945 31-311 (367)
279 4exu_A Mitogen-activated prote 100.0 2.8E-33 9.6E-38 316.7 15.0 252 686-945 45-323 (371)
280 2j0j_A Focal adhesion kinase 1 100.0 4.8E-33 1.7E-37 336.2 17.9 242 687-952 394-651 (656)
281 3cek_A Dual specificity protei 100.0 5E-33 1.7E-37 307.2 16.5 239 685-946 30-293 (313)
282 3uqc_A Probable conserved tran 100.0 2.4E-33 8.1E-38 305.0 13.5 226 686-951 34-264 (286)
283 2ft3_A Biglycan; proteoglycan, 100.0 2.2E-31 7.4E-36 296.6 27.9 294 111-431 34-331 (332)
284 3pg1_A Mitogen-activated prote 100.0 9E-33 3.1E-37 311.8 16.8 251 685-945 24-316 (362)
285 1ogq_A PGIP-2, polygalacturona 100.0 1E-32 3.5E-37 304.3 16.1 250 350-601 52-307 (313)
286 2iwi_A Serine/threonine-protei 100.0 4.5E-33 1.5E-37 307.4 13.2 232 686-945 34-283 (312)
287 2b9h_A MAP kinase FUS3, mitoge 100.0 2.7E-32 9.1E-37 306.8 18.9 251 686-945 14-305 (353)
288 2eu9_A Dual specificity protei 100.0 4.5E-32 1.6E-36 304.9 19.9 253 685-945 21-333 (355)
289 3coi_A Mitogen-activated prote 100.0 1.8E-32 6.2E-37 308.1 16.3 248 687-945 28-305 (353)
290 3qa8_A MGC80376 protein; kinas 100.0 5E-33 1.7E-37 329.5 11.8 257 685-951 16-308 (676)
291 2ft3_A Biglycan; proteoglycan, 100.0 8.5E-31 2.9E-35 291.8 26.5 292 129-455 30-331 (332)
292 1xku_A Decorin; proteoglycan, 100.0 1.2E-30 4.2E-35 290.3 27.7 293 86-431 32-330 (330)
293 1xku_A Decorin; proteoglycan, 100.0 1.5E-30 5.3E-35 289.5 27.8 290 132-455 31-330 (330)
294 2pzi_A Probable serine/threoni 100.0 2.7E-32 9.2E-37 333.1 14.5 234 686-951 83-327 (681)
295 3m2w_A MAP kinase-activated pr 100.0 9.3E-32 3.2E-36 294.9 16.6 221 690-945 25-256 (299)
296 3dzo_A Rhoptry kinase domain; 100.0 9.6E-31 3.3E-35 299.9 14.8 226 689-944 84-362 (413)
297 1z7x_W Ribonuclease inhibitor; 100.0 3.5E-34 1.2E-38 334.5 -15.6 378 180-576 3-440 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 6.1E-34 2.1E-38 332.5 -15.3 356 62-458 4-412 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.7E-34 285.4 18.1 285 42-340 22-317 (353)
300 2vuw_A Serine/threonine-protei 100.0 5.5E-31 1.9E-35 293.9 4.6 190 683-878 20-278 (336)
301 2z80_A TOLL-like receptor 2, v 100.0 5.2E-28 1.8E-32 271.7 20.2 251 83-361 29-290 (353)
302 4fcg_A Uncharacterized protein 100.0 6.6E-28 2.3E-32 267.4 20.1 225 132-361 81-314 (328)
303 3ogk_B Coronatine-insensitive 100.0 1.7E-31 5.8E-36 322.1 -11.0 325 154-481 162-527 (592)
304 2z66_A Variable lymphocyte rec 100.0 6.6E-28 2.3E-32 265.2 17.2 248 113-385 10-261 (306)
305 3ogk_B Coronatine-insensitive 100.0 5.4E-31 1.9E-35 317.7 -8.9 375 178-554 110-528 (592)
306 2z66_A Variable lymphocyte rec 99.9 1.7E-27 5.9E-32 261.8 19.5 277 208-488 11-295 (306)
307 3g06_A SSPH2 (leucine-rich rep 99.9 1.5E-27 5.3E-32 284.5 20.1 289 39-394 11-306 (622)
308 3zyi_A Leucine-rich repeat-con 99.9 1.2E-26 3.9E-31 269.8 25.3 228 132-361 75-303 (452)
309 3zyi_A Leucine-rich repeat-con 99.9 2E-26 6.9E-31 267.8 25.9 244 88-337 57-303 (452)
310 1ozn_A Reticulon 4 receptor; N 99.9 2.4E-27 8.1E-32 257.9 15.6 205 133-337 33-238 (285)
311 1wwl_A Monocyte differentiatio 99.9 1.9E-28 6.4E-33 270.2 6.5 248 82-361 40-309 (312)
312 3zyj_A Leucine-rich repeat-con 99.9 4.9E-26 1.7E-30 263.6 25.8 247 87-361 45-292 (440)
313 1ozn_A Reticulon 4 receptor; N 99.9 6.5E-27 2.2E-31 254.4 17.3 224 207-433 14-238 (285)
314 3zyj_A Leucine-rich repeat-con 99.9 2.4E-26 8.3E-31 266.1 22.5 230 325-579 65-295 (440)
315 3o53_A Protein LRIM1, AGAP0063 99.9 2.6E-28 9E-33 269.6 2.3 265 256-581 14-281 (317)
316 1wwl_A Monocyte differentiatio 99.9 9.3E-28 3.2E-32 264.6 5.4 202 226-433 93-309 (312)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-27 4.7E-32 263.9 6.0 268 229-533 11-281 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.8E-25 6E-30 266.7 23.9 267 229-562 41-307 (622)
319 2o6q_A Variable lymphocyte rec 99.9 2.8E-25 9.5E-30 239.4 22.5 215 47-289 2-218 (270)
320 3oja_A Leucine-rich immune mol 99.9 9.3E-27 3.2E-31 272.3 7.3 234 301-571 35-270 (487)
321 3oja_A Leucine-rich immune mol 99.9 1.6E-26 5.3E-31 270.4 8.7 239 81-356 30-270 (487)
322 4azs_A Methyltransferase WBDD; 99.9 6.8E-27 2.3E-31 277.2 3.4 179 692-876 243-437 (569)
323 2z62_A TOLL-like receptor 4, v 99.9 9.3E-24 3.2E-28 228.3 22.3 205 133-338 29-238 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 1.9E-23 6.3E-28 225.9 22.1 223 136-362 11-238 (276)
325 2p1m_B Transport inhibitor res 99.9 6.1E-28 2.1E-32 291.1 -15.4 157 395-552 371-544 (594)
326 3rfs_A Internalin B, repeat mo 99.9 8.3E-24 2.8E-28 228.1 18.2 205 110-323 41-245 (272)
327 3rfs_A Internalin B, repeat mo 99.9 8.5E-24 2.9E-28 228.0 17.2 211 81-301 37-247 (272)
328 2p1m_B Transport inhibitor res 99.9 2.5E-27 8.6E-32 285.7 -13.0 417 130-574 64-542 (594)
329 2o6q_A Variable lymphocyte rec 99.9 2.2E-22 7.6E-27 216.7 24.2 202 112-338 18-219 (270)
330 1p9a_G Platelet glycoprotein I 99.9 5.1E-22 1.7E-26 215.9 21.2 113 224-337 96-208 (290)
331 3m19_A Variable lymphocyte rec 99.9 3.5E-22 1.2E-26 212.6 19.2 188 48-265 3-192 (251)
332 1p9a_G Platelet glycoprotein I 99.9 7.2E-22 2.4E-26 214.7 21.8 134 226-361 75-208 (290)
333 2ast_B S-phase kinase-associat 99.9 1.3E-24 4.5E-29 242.1 -1.3 231 48-286 35-282 (336)
334 3en9_A Glycoprotease, O-sialog 99.9 1.5E-23 5E-28 247.3 5.7 174 690-878 343-539 (540)
335 3goz_A Leucine-rich repeat-con 99.9 7.8E-24 2.7E-28 238.4 0.2 255 256-530 2-299 (362)
336 4glp_A Monocyte differentiatio 99.9 4.3E-22 1.5E-26 219.1 13.3 203 348-577 91-308 (310)
337 2ca6_A RAN GTPase-activating p 99.9 8.1E-24 2.8E-28 240.6 -2.5 246 316-578 24-318 (386)
338 2ast_B S-phase kinase-associat 99.9 3.1E-23 1.1E-27 231.0 1.8 255 86-370 48-315 (336)
339 2xwt_C Thyrotropin receptor; s 99.9 2.9E-21 9.9E-26 203.9 16.8 196 133-334 32-236 (239)
340 3cvr_A Invasion plasmid antige 99.9 9.5E-22 3.3E-26 231.6 13.1 209 40-300 33-254 (571)
341 4glp_A Monocyte differentiatio 99.9 2.1E-21 7E-26 213.6 14.6 204 132-361 91-307 (310)
342 2ca6_A RAN GTPase-activating p 99.9 8.5E-24 2.9E-28 240.4 -4.7 246 291-556 23-320 (386)
343 2xwt_C Thyrotropin receptor; s 99.9 5.6E-21 1.9E-25 201.7 17.2 195 157-357 32-235 (239)
344 3goz_A Leucine-rich repeat-con 99.9 5E-23 1.7E-27 231.7 0.6 155 160-314 2-181 (362)
345 3m19_A Variable lymphocyte rec 99.8 2.3E-20 7.7E-25 198.6 20.8 179 111-290 15-193 (251)
346 1h6u_A Internalin H; cell adhe 99.8 3.5E-21 1.2E-25 211.3 14.8 193 129-337 38-230 (308)
347 1h6u_A Internalin H; cell adhe 99.8 5.5E-21 1.9E-25 209.8 15.5 193 83-314 39-231 (308)
348 3cvr_A Invasion plasmid antige 99.8 4.9E-20 1.7E-24 217.0 19.2 188 111-324 60-254 (571)
349 4ay9_X Follicle-stimulating ho 99.8 4.6E-20 1.6E-24 206.4 17.7 221 325-549 31-256 (350)
350 2o6s_A Variable lymphocyte rec 99.8 7E-20 2.4E-24 188.8 16.7 61 133-193 29-89 (208)
351 4ay9_X Follicle-stimulating ho 99.8 6.7E-20 2.3E-24 205.1 17.1 197 88-289 12-215 (350)
352 2o6s_A Variable lymphocyte rec 99.8 2.1E-19 7.3E-24 185.2 17.7 181 135-325 10-190 (208)
353 4b8c_D Glucose-repressible alc 99.8 3.9E-20 1.3E-24 226.0 2.1 206 19-273 130-337 (727)
354 3e6j_A Variable lymphocyte rec 99.8 5.1E-18 1.8E-22 177.5 17.5 163 42-242 11-173 (229)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-18 7.4E-23 179.1 14.4 137 445-581 33-171 (220)
356 1m9s_A Internalin B; cell inva 99.8 5.1E-19 1.7E-23 210.8 10.9 171 82-265 40-210 (605)
357 1m9s_A Internalin B; cell inva 99.8 1.2E-18 4E-23 207.7 13.4 187 87-288 23-209 (605)
358 1h6t_A Internalin B; cell adhe 99.8 1.1E-18 3.9E-23 189.6 11.3 161 117-289 31-191 (291)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 6.5E-18 2.2E-22 175.5 16.4 133 134-266 34-167 (220)
360 2xot_A Amphoterin-induced prot 99.8 3.8E-18 1.3E-22 191.6 15.4 176 88-289 21-202 (361)
361 1h6t_A Internalin B; cell adhe 99.8 4.3E-18 1.5E-22 185.0 14.9 169 110-290 46-214 (291)
362 1zar_A RIO2 kinase; serine kin 99.8 2.2E-19 7.6E-24 193.8 4.4 141 688-851 95-253 (282)
363 2v9t_B SLIT homolog 2 protein 99.7 1.6E-17 5.4E-22 172.6 17.3 132 133-264 33-164 (220)
364 2v9t_B SLIT homolog 2 protein 99.7 2E-17 6.7E-22 171.9 17.3 153 135-290 14-166 (220)
365 2xot_A Amphoterin-induced prot 99.7 9.6E-18 3.3E-22 188.3 15.3 177 134-313 20-202 (361)
366 3e6j_A Variable lymphocyte rec 99.7 4.4E-17 1.5E-21 170.4 18.4 134 132-266 40-173 (229)
367 1dce_A Protein (RAB geranylger 99.7 2.5E-20 8.6E-25 220.8 -10.7 202 321-555 346-549 (567)
368 4b8c_D Glucose-repressible alc 99.7 2.7E-18 9.1E-23 209.8 6.4 196 110-334 173-369 (727)
369 4ezg_A Putative uncharacterize 99.7 2E-17 7E-22 168.7 11.3 154 82-265 41-194 (197)
370 1xeu_A Internalin C; cellular 99.7 9.7E-18 3.3E-22 179.3 8.0 167 86-266 20-186 (263)
371 1dce_A Protein (RAB geranylger 99.7 2.9E-19 9.8E-24 211.7 -5.6 204 225-462 346-551 (567)
372 4ezg_A Putative uncharacterize 99.7 4.3E-17 1.5E-21 166.3 11.0 156 127-290 39-195 (197)
373 1xeu_A Internalin C; cellular 99.7 9.4E-17 3.2E-21 171.6 13.2 167 63-243 21-187 (263)
374 1w8a_A SLIT protein; signaling 99.7 5.6E-17 1.9E-21 164.6 10.0 132 447-581 11-144 (192)
375 1w8a_A SLIT protein; signaling 99.6 1.1E-15 3.9E-20 154.9 13.4 87 131-217 53-139 (192)
376 3sb4_A Hypothetical leucine ri 99.6 7.6E-16 2.6E-20 170.5 9.3 280 84-402 24-327 (329)
377 3sb4_A Hypothetical leucine ri 99.6 7.2E-16 2.5E-20 170.7 7.9 101 467-569 226-327 (329)
378 2ell_A Acidic leucine-rich nuc 99.6 3.1E-15 1E-19 148.2 10.8 135 129-265 21-160 (168)
379 1zth_A RIO1 serine protein kin 99.6 1.8E-15 6E-20 161.2 9.1 136 687-833 51-219 (258)
380 2wfh_A SLIT homolog 2 protein 99.6 6.2E-15 2.1E-19 149.5 12.1 131 447-580 13-143 (193)
381 2o6r_A Variable lymphocyte rec 99.6 6.2E-15 2.1E-19 147.4 11.9 133 447-581 10-142 (177)
382 2ell_A Acidic leucine-rich nuc 99.6 9.9E-15 3.4E-19 144.5 12.5 131 180-312 24-159 (168)
383 2je0_A Acidic leucine-rich nuc 99.6 2.6E-15 8.8E-20 145.5 7.1 126 132-259 17-147 (149)
384 2o6r_A Variable lymphocyte rec 99.6 3.7E-14 1.3E-18 141.7 15.0 109 132-240 28-136 (177)
385 2je0_A Acidic leucine-rich nuc 99.5 5E-15 1.7E-19 143.5 7.7 126 156-283 17-147 (149)
386 2wfh_A SLIT homolog 2 protein 99.5 4.1E-14 1.4E-18 143.4 14.4 107 133-240 32-138 (193)
387 4fdw_A Leucine rich hypothetic 99.5 1.1E-12 3.9E-17 148.3 23.4 264 84-361 112-383 (401)
388 1ds9_A Outer arm dynein; leuci 99.5 5.3E-16 1.8E-20 158.3 -5.1 152 419-576 17-185 (198)
389 4fdw_A Leucine rich hypothetic 99.5 2E-12 6.7E-17 146.4 22.2 240 157-431 136-381 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.5 6.3E-14 2.2E-18 139.9 8.6 112 79-193 13-126 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.5 3.8E-14 1.3E-18 141.5 6.9 131 442-577 17-154 (176)
392 1ds9_A Outer arm dynein; leuci 99.4 1.2E-15 4E-20 155.7 -6.8 153 394-553 16-186 (198)
393 3g39_A Variable lymphocyte rec 99.4 3.9E-13 1.3E-17 133.2 10.3 108 470-580 12-119 (170)
394 4fs7_A Uncharacterized protein 99.4 8.3E-12 2.8E-16 141.7 22.6 217 200-428 158-374 (394)
395 4fs7_A Uncharacterized protein 99.4 1.7E-11 5.8E-16 139.1 23.2 332 74-425 60-393 (394)
396 2r9u_A Variable lymphocyte rec 99.4 8.8E-13 3E-17 131.1 10.3 108 470-580 15-122 (174)
397 3g39_A Variable lymphocyte rec 99.4 1.1E-12 3.6E-17 130.0 10.3 109 446-556 11-119 (170)
398 4gyi_A RIO2 kinase; protein ki 99.4 8.7E-14 3E-18 153.7 1.8 140 685-832 97-264 (397)
399 2r9u_A Variable lymphocyte rec 99.3 1.2E-11 4.1E-16 122.8 13.1 15 88-103 15-29 (174)
400 2ifg_A High affinity nerve gro 99.2 3.1E-11 1.1E-15 134.4 9.7 106 471-579 12-119 (347)
401 3un9_A NLR family member X1; l 99.1 1.3E-12 4.3E-17 146.5 -4.1 111 467-577 126-253 (372)
402 3un9_A NLR family member X1; l 99.1 5.3E-13 1.8E-17 149.6 -7.2 166 396-561 72-261 (372)
403 2ifg_A High affinity nerve gro 99.1 3.9E-10 1.3E-14 125.5 11.6 103 136-241 12-116 (347)
404 4gt6_A Cell surface protein; l 99.1 9E-09 3.1E-13 116.5 22.9 110 100-212 53-168 (394)
405 4gt6_A Cell surface protein; l 99.0 1.6E-08 5.6E-13 114.4 23.7 329 78-456 56-390 (394)
406 3tm0_A Aminoglycoside 3'-phosp 98.9 6.1E-09 2.1E-13 110.8 14.3 135 690-830 21-211 (263)
407 1nd4_A Aminoglycoside 3'-phosp 98.7 4E-08 1.4E-12 104.1 11.7 126 693-830 30-212 (264)
408 3dxp_A Putative acyl-COA dehyd 98.7 4E-08 1.4E-12 109.7 11.4 142 688-832 43-248 (359)
409 4h09_A Hypothetical leucine ri 98.7 1.8E-06 6E-11 97.0 24.1 130 319-452 212-341 (379)
410 4h09_A Hypothetical leucine ri 98.6 3E-06 1E-10 95.1 24.3 79 81-165 42-122 (379)
411 3rw6_A Nuclear RNA export fact 98.6 1.8E-10 6.3E-15 121.1 -10.2 41 130-170 168-210 (267)
412 2ra8_A Uncharacterized protein 98.6 1.4E-08 4.8E-13 112.6 3.1 64 275-338 251-321 (362)
413 2ra8_A Uncharacterized protein 98.6 1.5E-08 5.2E-13 112.3 3.0 138 150-290 166-321 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.5 8.3E-08 2.8E-12 104.4 6.6 180 691-877 28-287 (304)
415 3rw6_A Nuclear RNA export fact 98.4 4.2E-08 1.4E-12 103.1 -0.6 101 467-569 141-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.1 4.1E-07 1.4E-11 90.9 0.0 90 487-576 61-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.0 6.3E-07 2.2E-11 89.5 -1.0 40 106-145 32-78 (185)
418 3r70_A Aminoglycoside phosphot 97.9 2.8E-05 9.6E-10 84.9 9.9 131 687-831 41-236 (320)
419 3d1u_A Putative fructosamine-3 97.9 4.3E-05 1.5E-09 81.8 11.0 75 688-768 20-97 (288)
420 3tdw_A Gentamicin resistance p 97.9 6.5E-05 2.2E-09 81.3 12.3 133 691-831 27-223 (306)
421 4gkh_A Aminoglycoside 3'-phosp 97.8 0.00011 3.7E-09 77.9 12.9 127 698-830 40-221 (272)
422 3ats_A Putative uncharacterize 97.5 0.00025 8.5E-09 78.6 9.9 78 692-769 30-121 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 97.2 0.00077 2.6E-08 74.6 9.9 71 690-768 48-121 (362)
424 3jr1_A Putative fructosamine-3 97.1 0.0027 9.1E-08 68.4 11.9 76 688-768 41-118 (312)
425 2olc_A MTR kinase, methylthior 97.1 0.0012 4.1E-08 74.2 9.5 77 688-766 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.0 0.00026 8.8E-09 68.9 2.6 34 205-238 62-95 (176)
427 3e4g_A ATP synthase subunit S, 97.0 0.0002 6.8E-09 69.7 1.7 34 181-214 62-95 (176)
428 3f7w_A Putative fructosamine-3 96.7 0.0055 1.9E-07 65.3 10.4 76 688-768 20-97 (288)
429 2pyw_A Uncharacterized protein 96.6 0.004 1.4E-07 70.4 8.8 73 799-874 231-313 (420)
430 3rfe_A Platelet glycoprotein I 96.3 0.0046 1.6E-07 57.1 6.1 58 519-578 12-70 (130)
431 3rfe_A Platelet glycoprotein I 96.3 0.0066 2.3E-07 56.1 7.1 55 114-168 12-67 (130)
432 2q83_A YTAA protein; 2635576, 96.0 0.028 9.5E-07 61.3 11.5 42 787-830 199-250 (346)
433 1pgv_A TMD-1, tropomodulin TMD 95.9 0.0017 5.9E-08 64.3 1.0 86 489-574 68-168 (197)
434 3csv_A Aminoglycoside phosphot 95.9 0.048 1.6E-06 59.3 12.4 33 799-831 182-216 (333)
435 1pgv_A TMD-1, tropomodulin TMD 95.0 0.0042 1.4E-07 61.5 0.2 86 203-288 69-169 (197)
436 2ppq_A HSK, HK, homoserine kin 94.0 0.11 3.9E-06 55.8 8.7 136 689-830 28-215 (322)
437 1zyl_A Hypothetical protein YI 93.8 0.082 2.8E-06 57.1 7.0 72 694-767 36-113 (328)
438 1nw1_A Choline kinase (49.2 KD 93.5 0.1 3.5E-06 58.8 7.3 71 691-767 81-158 (429)
439 2yle_A Protein spire homolog 1 93.0 0.78 2.7E-05 45.6 11.7 99 766-876 33-135 (229)
440 3feg_A Choline/ethanolamine ki 92.7 0.1 3.6E-06 57.5 5.6 70 694-768 61-137 (379)
441 3dxq_A Choline/ethanolamine ki 92.3 0.56 1.9E-05 49.8 10.8 70 690-768 25-95 (301)
442 2qg7_A Ethanolamine kinase PV0 91.9 0.57 1.9E-05 53.1 10.6 74 690-768 115-188 (458)
443 2jwa_A Receptor tyrosine-prote 89.7 0.51 1.7E-05 33.5 4.6 10 621-630 13-22 (44)
444 3c5i_A Choline kinase; choline 89.3 0.59 2E-05 51.3 7.5 29 799-830 211-239 (369)
445 2l2t_A Receptor tyrosine-prote 88.5 0.53 1.8E-05 33.4 4.0 26 622-647 12-38 (44)
446 3i1a_A Spectinomycin phosphotr 88.1 2.1 7.1E-05 46.3 10.8 69 692-768 32-108 (339)
447 2ks1_B Epidermal growth factor 86.5 0.71 2.4E-05 32.9 3.7 24 623-646 15-38 (44)
448 3f2s_A CK, chetk-alpha, cholin 83.5 1.7 5.7E-05 48.1 7.1 31 799-829 243-277 (401)
449 2k1k_A Ephrin type-A receptor 80.4 2.7 9.4E-05 28.9 4.6 22 616-637 7-28 (38)
450 4ann_A ESSB; membrane protein, 70.2 7.9 0.00027 38.3 6.8 115 739-878 43-158 (215)
451 4ano_A ESSB; membrane protein, 66.8 12 0.0004 37.2 7.2 114 739-878 48-163 (219)
452 3cxl_A N-chimerin; SH2, RHO-GA 56.7 1.3 4.3E-05 50.3 -2.1 55 696-751 152-214 (463)
453 3mes_A Choline kinase; malaria 44.2 40 0.0014 37.3 7.5 72 692-768 79-157 (424)
454 2knc_A Integrin alpha-IIB; tra 43.2 53 0.0018 24.4 5.5 25 617-641 10-34 (54)
455 1iij_A ERBB-2 receptor protein 37.5 12 0.00041 25.1 1.1 7 622-628 10-16 (35)
456 2l8s_A Integrin alpha-1; trans 37.0 60 0.002 24.1 4.8 24 618-641 8-31 (54)
457 2ks1_B Epidermal growth factor 32.1 58 0.002 23.1 4.0 29 619-647 14-42 (44)
458 2l34_A TYRO protein tyrosine k 30.5 64 0.0022 21.3 3.7 24 620-643 7-30 (33)
459 1cja_A Protein (actin-fragmin 29.1 82 0.0028 33.3 6.4 134 690-831 75-236 (342)
460 2k1a_A Integrin alpha-IIB; sin 22.2 1.1E+02 0.0038 21.4 3.9 25 617-641 8-32 (42)
461 2knc_B Integrin beta-3; transm 22.0 1.2E+02 0.0042 24.5 4.8 18 620-637 11-28 (79)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.5e-81 Score=776.59 Aligned_cols=584 Identities=36% Similarity=0.589 Sum_probs=460.4
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcccceeeCCCCCEEEEEcCCCCcccc---cc---------------
Q 002105 17 TCHGAELELLLSFKSTVNDPYNFLSNWDSSVTFCKWNGISCQNSTHVNAIELSAKNISGK---IS--------------- 78 (966)
Q Consensus 17 ~~~~~~~~~Ll~~k~~~~~~~~~l~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~l~~~---~~--------------- 78 (966)
.+.++|++||++||+++.||. .+++|+.++|||+|+||+|+ .++|+.|||++++++|. ++
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECT
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCc
Confidence 456789999999999999988 89999877899999999998 67999999999998886 43
Q ss_pred --------ccccCCCCCCEEEcCCCCCccccCh-hhhhcCCCCcEEECCCCCCCCCCC----------------------
Q 002105 79 --------SSIFHLPHVESINLSSNQLSGEIPS-DIFSSSNSLRFLNLSNNNFTGPVP---------------------- 127 (966)
Q Consensus 79 --------~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~~l~~L~~L~Ls~N~l~~~~~---------------------- 127 (966)
+.+..+++|++|||++|.++|.+|. ..+..+++|++|+|++|.+++..|
T Consensus 86 ~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 165 (768)
T 3rgz_A 86 NSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG 165 (768)
T ss_dssp TSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEE
T ss_pred CCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCC
Confidence 4677888899999999998887776 123445777777777766654333
Q ss_pred ------------------------------CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCC
Q 002105 128 ------------------------------IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSIS 177 (966)
Q Consensus 128 ------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 177 (966)
...+++|++|+|++|.+++.+|. ++++++|++|+|++|.+++.+|..++
T Consensus 166 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~ 244 (768)
T 3rgz_A 166 ANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAIS 244 (768)
T ss_dssp ETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTT
T ss_pred cCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHh
Confidence 12334444444445555544444 55555555555555555555555555
Q ss_pred CCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCC-CCCCEEEeecccccccCCcCCCCCCccce
Q 002105 178 NITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDL-TSLNHLDLVYNNLTGQIPPSFGNLSNLRY 256 (966)
Q Consensus 178 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 256 (966)
++++|++|++++|.+++.+|.. .+++|++|++++|.+++.+|..+..+ ++|++|++++|++++.+|..|+++++|++
T Consensus 245 ~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 322 (768)
T 3rgz_A 245 TCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322 (768)
T ss_dssp TCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCE
T ss_pred cCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccE
Confidence 5555555555555555544443 45555555666665555666666554 67777777777777667777777777777
Q ss_pred EeccccccCCCCChh-hhcCCCCCEEEccCCcCcccCchhhcCCC-CCceecccCCCCCCCCCCCCCC--CCCccEEEcc
Q 002105 257 LFLYQNKLTGSIPKS-ILGLKSLVSFDLSDNYLSGEIPEEVIQLQ-NLEILHLFSNNFTGKIPSSLAS--MPKLQVLQLW 332 (966)
Q Consensus 257 L~L~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~--l~~L~~L~L~ 332 (966)
|++++|++++.+|.. +..+++|++|++++|.+++.+|..+..++ +|+.|++++|.+++.+|..+.. +++|++|+++
T Consensus 323 L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~ 402 (768)
T 3rgz_A 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402 (768)
T ss_dssp EECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECC
T ss_pred EECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECC
Confidence 777777776666654 66777777777777777766777666665 6777777777777666666655 6778888888
Q ss_pred CCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcC
Q 002105 333 SNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGEL 412 (966)
Q Consensus 333 ~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 412 (966)
+|.+++.+|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++.+
T Consensus 403 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 482 (768)
T 3rgz_A 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482 (768)
T ss_dssp SSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcC
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCC-CcCcccccccccccccccccCCCc-----
Q 002105 413 SSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPD-SFGSDQLENLDLSENRFSGTIPRS----- 486 (966)
Q Consensus 413 ~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~L~Ls~N~l~~~~p~~----- 486 (966)
|..+..+++|++|++++|++++.+|..+..+++|++|+|++|+++|.+|. +..+++|+.|++++|+++|.+|..
T Consensus 483 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~ 562 (768)
T 3rgz_A 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTT
T ss_pred CHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhccc
Confidence 88888888888888888888888888888888888888888888888887 456788888888888888776653
Q ss_pred -----------------------------------------------------------------ccCcCCCCEEEccCC
Q 002105 487 -----------------------------------------------------------------FGRLSELMQLKISRN 501 (966)
Q Consensus 487 -----------------------------------------------------------------~~~l~~L~~L~Ls~N 501 (966)
+..+++|+.|||++|
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N 642 (768)
T 3rgz_A 563 GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 642 (768)
T ss_dssp TCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSS
T ss_pred chhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCC
Confidence 444678999999999
Q ss_pred ccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCC
Q 002105 502 KLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 502 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
+++|.+|.+++.+++|+.|+|++|+++|.+|..++.+++|+.||||+|+++|.+|..++.+++|++||+++|+++|.||.
T Consensus 643 ~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp CCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred cccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCccccccCC-CCCCC--CCCC
Q 002105 582 TGAFLAINATAVAGN-DLCGG--DSTS 605 (966)
Q Consensus 582 ~~~~~~~~~~~~~gn-~lcg~--~~~~ 605 (966)
.+++.+++..+|.|| ++||. .+|.
T Consensus 723 ~~~~~~~~~~~~~gN~~Lcg~~l~~C~ 749 (768)
T 3rgz_A 723 MGQFETFPPAKFLNNPGLCGYPLPRCD 749 (768)
T ss_dssp SSSGGGSCGGGGCSCTEEESTTSCCCC
T ss_pred chhhccCCHHHhcCCchhcCCCCcCCC
Confidence 999999999999999 89997 3454
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.4e-65 Score=634.57 Aligned_cols=517 Identities=34% Similarity=0.507 Sum_probs=419.4
Q ss_pred CCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC----CCCCCCCcEEeCCCCCCCCcCCCCc-CCCCC
Q 002105 83 HLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP----IGSLSRLEILDLSNNMLSGKIPEEI-GSFSG 157 (966)
Q Consensus 83 ~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~----~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 157 (966)
+|++|+.++++.|.+. .+|.. +..+++|++|||++|.++|.+| ++.+++|++|||++|.+++.+|..+ .++++
T Consensus 75 ~L~~L~~l~~~~~~~~-~l~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 152 (768)
T 3rgz_A 75 SLTGLESLFLSNSHIN-GSVSG-FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNS 152 (768)
T ss_dssp TCTTCCEEECTTSCEE-ECCCC-CCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTT
T ss_pred ccCcccccCCcCCCcC-CCchh-hccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCC
Confidence 4667777777777665 35554 5667999999999999998544 5889999999999999988777665 56666
Q ss_pred cCEEEccCCCCcccCCcC-------------------------CCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 158 LKVLDLGGNVLVGEIPLS-------------------------ISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 158 L~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
|++|+|++|.+++..|.. +.++++|++|++++|.+++.+|. ++++++|++|+++
T Consensus 153 L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls 231 (768)
T 3rgz_A 153 LEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS 231 (768)
T ss_dssp CSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECC
T ss_pred CCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECc
Confidence 666666666655443322 24556666666666666665555 6666666666666
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeeccc----------------------ccccCCcCCCCC-CccceEeccccccCCCCC
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNN----------------------LTGQIPPSFGNL-SNLRYLFLYQNKLTGSIP 269 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~----------------------l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p 269 (966)
+|.+++.+|..++++++|++|++++|. +++.+|..+..+ ++|++|++++|++++.+|
T Consensus 232 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp SSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred CCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 666666556555555555555555554 444566666554 777777777777777777
Q ss_pred hhhhcCCCCCEEEccCCcCcccCchh-hcCCCCCceecccCCCCCCCCCCCCCCCC-CccEEEccCCcCcccCCccccC-
Q 002105 270 KSILGLKSLVSFDLSDNYLSGEIPEE-VIQLQNLEILHLFSNNFTGKIPSSLASMP-KLQVLQLWSNQFSGEIPSNLGK- 346 (966)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~- 346 (966)
..+.++++|++|++++|.++|.+|.. +..+++|++|++++|.+++.+|..+..++ +|+.|++++|.+++.+|..+..
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~ 391 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCS
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhc
Confidence 77777777888888888777777765 77777888888888888777777777776 7888888888888777777766
Q ss_pred -CCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEE
Q 002105 347 -QNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFL 425 (966)
Q Consensus 347 -~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 425 (966)
+++|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++.+.+|..+..+++|++|
T Consensus 392 ~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 471 (768)
T 3rgz_A 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471 (768)
T ss_dssp TTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEE
Confidence 7789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccCcchhccCCCcEecCCCCcCCccCCC-CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccC
Q 002105 426 DISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPD-SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLF 504 (966)
Q Consensus 426 dLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (966)
++++|++++.+|..+..+++|++|+|++|++++.+|. +..+++|++|+|++|+++|.+|..++.+++|+.|++++|+++
T Consensus 472 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 551 (768)
T 3rgz_A 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred EecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccC
Confidence 9999999999999999999999999999999999998 457799999999999999999999999999999999999999
Q ss_pred CCChhhcc----------------------------------------------------------------------cc
Q 002105 505 GDIPEELS----------------------------------------------------------------------SC 514 (966)
Q Consensus 505 ~~~p~~~~----------------------------------------------------------------------~l 514 (966)
|.+|..+. .+
T Consensus 552 g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l 631 (768)
T 3rgz_A 552 GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631 (768)
T ss_dssp SBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSS
T ss_pred CcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcc
Confidence 88886543 35
Q ss_pred ccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCC-CccCCCccccc
Q 002105 515 KKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPST-GAFLAINATAV 593 (966)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~ 593 (966)
++|++|||++|+++|.+|..++.++.|+.|||++|+++|.+|..+++++.|+.||+++|+++|.+|.. +.+..+....+
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 67899999999999999999999999999999999999999999999999999999999999999965 44556677778
Q ss_pred cCCCCCCCC
Q 002105 594 AGNDLCGGD 602 (966)
Q Consensus 594 ~gn~lcg~~ 602 (966)
.+|.+.|..
T Consensus 712 s~N~l~g~i 720 (768)
T 3rgz_A 712 SNNNLSGPI 720 (768)
T ss_dssp CSSEEEEEC
T ss_pred cCCcccccC
Confidence 888877753
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-57 Score=559.97 Aligned_cols=535 Identities=21% Similarity=0.191 Sum_probs=455.4
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeC
Q 002105 62 HVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDL 139 (966)
Q Consensus 62 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~L 139 (966)
+++.|+|++|++++..+.+|.++++|++|||++|.+.+ +++..+..+++|++|+|++|.+++..+ ++.+++|++|+|
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK-LEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCC-CCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCc-cCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 78999999999999888889999999999999999985 555667778999999999999997443 789999999999
Q ss_pred CCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccc--cCCcceEEEccCCCCC
Q 002105 140 SNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIG--QLRNLKWIYLGYNNLS 217 (966)
Q Consensus 140 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~L~~N~l~ 217 (966)
++|++++..|..|+++++|++|+|++|.+.+..|..++++++|++|++++|.+++..+..+. .+++|++|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988888999999999999999999999999999999999999999999987777664 4589999999999999
Q ss_pred CCCCcCccCC---------------------------CCCCEEEeecccccccCCcCCCCCCc--cceEeccccccCCCC
Q 002105 218 GEIPKEIGDL---------------------------TSLNHLDLVYNNLTGQIPPSFGNLSN--LRYLFLYQNKLTGSI 268 (966)
Q Consensus 218 ~~~p~~l~~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~ 268 (966)
+..|..+..+ ++|++|++++|.+++..|.+|.+++. |++|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 8888776654 56788888888898888888988865 999999999999888
Q ss_pred ChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCC-----CCCC----CCCCCCCccEEEccCCcCccc
Q 002105 269 PKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTG-----KIPS----SLASMPKLQVLQLWSNQFSGE 339 (966)
Q Consensus 269 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~----~l~~l~~L~~L~L~~N~l~~~ 339 (966)
|..|..+++|++|++++|.+++..|..+..+++|+.|++++|...+ .+|. .+..+++|++|++++|.+++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 8889999999999999999999888899999999999998876554 2332 678899999999999999988
Q ss_pred CCccccCCCCCcEEEccCCccccc--CCCCccC--CCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCC-h
Q 002105 340 IPSNLGKQNNLTVIDLSTNFLTGK--IPETLCD--SGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELS-S 414 (966)
Q Consensus 340 ~p~~~~~~~~L~~L~Ls~N~l~~~--~p~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~ 414 (966)
.+..|..+++|+.|++++|.+++. .+..|.. ..+|+.|++++|++++..|..|..+++|+.|++++|++.+.+| .
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 888899999999999999876432 2233332 2578999999999998888899999999999999999987665 6
Q ss_pred hhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCC--ccCCC-CcCcccccccccccccccccCCCcccCcC
Q 002105 415 EFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFS--GKLPD-SFGSDQLENLDLSENRFSGTIPRSFGRLS 491 (966)
Q Consensus 415 ~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 491 (966)
.|..+++|++|++++|++.+..+..+..+++|+.|++++|.++ +.+|. +..+++|+.|++++|++++..|..|..++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 8889999999999999998888888888999999999999887 45666 45678899999999999988888899999
Q ss_pred CCCEEEccCCccCCCCh--------hhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCC
Q 002105 492 ELMQLKISRNKLFGDIP--------EELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVA 563 (966)
Q Consensus 492 ~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~ 563 (966)
+|+.|+|++|++++..+ ..+.++++|+.|+|++|+++...+..|..+++|+.|||++|++++..+..|..++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 99999999999876422 2378889999999999999854445788999999999999999987777788899
Q ss_pred CCCeeeCcCCcccccCCCCC--ccCCCccccccCCC
Q 002105 564 SLVQVNISHNHFHGSLPSTG--AFLAINATAVAGND 597 (966)
Q Consensus 564 ~L~~l~ls~N~l~g~ip~~~--~~~~~~~~~~~gn~ 597 (966)
+|+.|++++|++++..|..- .+..+....+.+|.
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~ 620 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCC
Confidence 99999999999988766421 34556666777774
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3e-56 Score=547.51 Aligned_cols=520 Identities=22% Similarity=0.254 Sum_probs=465.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC--CCCCCCCCcEEe
Q 002105 61 THVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV--PIGSLSRLEILD 138 (966)
Q Consensus 61 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~ 138 (966)
++++.|+|++|.+++..+.+|.++++|++|+|++|.++ .+|...|..+++|++|+|++|.+++.. .++.+++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 47899999999999999999999999999999999998 788888888899999999999998754 378999999999
Q ss_pred CCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCC--CCCCCCEEEccCCCCcccCCcccccC-------------
Q 002105 139 LSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSIS--NITSLQIFTLASNQLIGSIPREIGQL------------- 203 (966)
Q Consensus 139 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l------------- 203 (966)
|++|.+++..|..++++++|++|++++|.+++..+..+. .+++|++|++++|.+++..|..+..+
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 999999999999999999999999999999987776554 56899999999999998888777654
Q ss_pred --------------CcceEEEccCCCCCCCCCcCccCCCC--CCEEEeecccccccCCcCCCCCCccceEeccccccCCC
Q 002105 204 --------------RNLKWIYLGYNNLSGEIPKEIGDLTS--LNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGS 267 (966)
Q Consensus 204 --------------~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 267 (966)
++|+.|++++|.+++..|..|..++. |++|++++|++++..|..|+++++|++|++++|++++.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 45778888889998888899988865 99999999999998899999999999999999999999
Q ss_pred CChhhhcCCCCCEEEccCCcCcc-----cCch----hhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcc
Q 002105 268 IPKSILGLKSLVSFDLSDNYLSG-----EIPE----EVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSG 338 (966)
Q Consensus 268 ~p~~l~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 338 (966)
.|..+.++++|++|++++|...+ .+|. .+..+++|+.|++++|.+++..+..|.++++|++|++++|.+.+
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 99999999999999999876554 2333 67889999999999999999989999999999999999998643
Q ss_pred cC--CccccC--CCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCC-CccccCccCceeeccccccCCcCC
Q 002105 339 EI--PSNLGK--QNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIP-NSLSTCKSLRRVRLQNNRLSGELS 413 (966)
Q Consensus 339 ~~--p~~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~ 413 (966)
.. +..|.. .++|+.|++++|.+++..|..+..+++|+.|++++|.+++.+| ..|.++++|++|++++|++.+..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 22 223332 3589999999999999999999999999999999999998776 689999999999999999999999
Q ss_pred hhhcCCCcccEEcccCCCCC--CccCcchhccCCCcEecCCCCcCCccCCC-CcCcccccccccccccccccCC------
Q 002105 414 SEFTRLPLVYFLDISGNDLS--GRIGEQKWEMTSLQMLNLAGNNFSGKLPD-SFGSDQLENLDLSENRFSGTIP------ 484 (966)
Q Consensus 414 ~~~~~l~~L~~LdLs~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~L~Ls~N~l~~~~p------ 484 (966)
..|..+++|+.|++++|.+. +.+|..+..+++|+.|+|++|++++..|. +.++++|++|++++|++++..+
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 527 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTS
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCC
Confidence 99999999999999999987 57888899999999999999999988777 4578999999999999986532
Q ss_pred --CcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccc-c
Q 002105 485 --RSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLG-R 561 (966)
Q Consensus 485 --~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~-~ 561 (966)
..|..+++|+.|+|++|+++...+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+. .
T Consensus 528 ~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 607 (680)
T 1ziw_A 528 PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 607 (680)
T ss_dssp CCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHH
T ss_pred cchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccc
Confidence 2478999999999999999966566799999999999999999987778889999999999999999999888887 7
Q ss_pred CCCCCeeeCcCCcccccCCC
Q 002105 562 VASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 562 l~~L~~l~ls~N~l~g~ip~ 581 (966)
+++|+.+++++|++.+.++.
T Consensus 608 ~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 608 FRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HTTCSEEECTTCCCCBCCCC
T ss_pred ccccCEEEccCCCcccCCcc
Confidence 89999999999999998875
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-56 Score=541.86 Aligned_cols=512 Identities=20% Similarity=0.209 Sum_probs=343.6
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCC
Q 002105 63 VNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLS 140 (966)
Q Consensus 63 v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls 140 (966)
++.|||++|.+++..+.+|.++++|++|+|++|++.+ +++..|..+++|++|+|++|++++..| ++.+++|++|+|+
T Consensus 35 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp CCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred CcEEEccCCccCcCChhHhccCccceEEECCCCccce-eChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 4445555555554444445555555555555555442 323333444555555555555443222 3444555555555
Q ss_pred CCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcce--EEEccCCCCCC
Q 002105 141 NNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLK--WIYLGYNNLSG 218 (966)
Q Consensus 141 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~--~L~L~~N~l~~ 218 (966)
+|.+++..|..++.+++|++|+|++|.+.+..+..+..+++|++|++++|.+++..|..++.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 5555444344444555555555555544442222222344555555555554444444444444444 44445555444
Q ss_pred CCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccC-----CCCChhhhcCC--CCCEEEccCCcCccc
Q 002105 219 EIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLT-----GSIPKSILGLK--SLVSFDLSDNYLSGE 291 (966)
Q Consensus 219 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~-----~~~p~~l~~l~--~L~~L~Ls~N~l~~~ 291 (966)
..|..+.. .+|++|++++|. .++..+..+.++....+..+.+. ...+..+.++. +|+.|++++|.+++.
T Consensus 194 ~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~ 269 (606)
T 3t6q_A 194 IEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269 (606)
T ss_dssp ECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSC
T ss_pred cChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCcc
Confidence 33333322 344445544443 11222222222222222111111 11223333333 688888888888877
Q ss_pred CchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCC-ccC
Q 002105 292 IPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPET-LCD 370 (966)
Q Consensus 292 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~ 370 (966)
.+..+..+++|+.|++++|.++ .+|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+.+|.. +..
T Consensus 270 ~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (606)
T 3t6q_A 270 SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLEN 348 (606)
T ss_dssp CTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTT
T ss_pred CHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhc
Confidence 7777888888888888888888 67778888888889999888888877888888888889999888888766654 778
Q ss_pred CCCccEEEccCCCCCCCC--CCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcc-hhccCCCc
Q 002105 371 SGSLFKLILFSNSLEGKI--PNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQ-KWEMTSLQ 447 (966)
Q Consensus 371 ~~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~-~~~l~~L~ 447 (966)
+++|+.|++++|.+++.. |..+..+++|++|++++|++.+..|..|..+++|++|++++|++++..+.. +..+++|+
T Consensus 349 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 428 (606)
T 3t6q_A 349 LENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLK 428 (606)
T ss_dssp CTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCC
T ss_pred cCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCC
Confidence 888888888888888765 777888888899999988888888888888888899999888888776544 77788888
Q ss_pred EecCCCCcCCccCCCC-cCccccccccccccccccc---CCCcccCcCCCCEEEccCCccCCCChhhccccccccccccC
Q 002105 448 MLNLAGNNFSGKLPDS-FGSDQLENLDLSENRFSGT---IPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLS 523 (966)
Q Consensus 448 ~L~Ls~N~l~~~~p~~-~~~~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (966)
+|++++|.+++..|.. ..+++|++|++++|++++. .+..+..+++|+.|++++|++++..|..|..+++|+.|+|+
T Consensus 429 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 508 (606)
T 3t6q_A 429 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508 (606)
T ss_dssp EEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred EEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECC
Confidence 9999988888877774 4678888889998888763 33568888889999999998888888888888899999999
Q ss_pred CceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCC
Q 002105 524 NNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 524 ~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
+|++++.+|..+..++.| .|+|++|++++.+|..+..+++|+.+++++|++.+.++.
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 999888888888888888 899999999888888888888888999999988876653
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-56 Score=556.09 Aligned_cols=518 Identities=25% Similarity=0.245 Sum_probs=453.1
Q ss_pred CcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--
Q 002105 50 CKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP-- 127 (966)
Q Consensus 50 c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~-- 127 (966)
|.|..|-+ -..+++.|||++|.|++..+.+|.++++|++|||++|.+.+.|+++.|..+++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 56777777 456899999999999999999999999999999999988878988888999999999999999987544
Q ss_pred CCCCCCCcEEeCCCCCCCCcCCCC--cCCCCCcCEEEccCCCCcccCC-cCCCCCCCCCEEEccCCCCcccCCcccccC-
Q 002105 128 IGSLSRLEILDLSNNMLSGKIPEE--IGSFSGLKVLDLGGNVLVGEIP-LSISNITSLQIFTLASNQLIGSIPREIGQL- 203 (966)
Q Consensus 128 ~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l- 203 (966)
++.+++|++|+|++|.+++.+|.. +.++++|++|+|++|.+.+..+ ..|+++++|++|++++|.+++..|..++.+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 689999999999999999877665 9999999999999999987655 579999999999999999999999999888
Q ss_pred -CcceEEEccCCCCCCCCCcCccCCCC------CCEEEeecccccccCCcCCCCC---CccceEecccc---------cc
Q 002105 204 -RNLKWIYLGYNNLSGEIPKEIGDLTS------LNHLDLVYNNLTGQIPPSFGNL---SNLRYLFLYQN---------KL 264 (966)
Q Consensus 204 -~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~n---------~l 264 (966)
++|+.|+++.|.+.+..|..++.+.+ |++|++++|.+++..|..+... ++++.|.++.+ .+
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 89999999999999988888777765 9999999999998888776543 56788887633 33
Q ss_pred CCCCChhhhcC--CCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCc
Q 002105 265 TGSIPKSILGL--KSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPS 342 (966)
Q Consensus 265 ~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 342 (966)
.+..+..|.++ ++|+.|++++|.+.+..|..+..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 33334445554 7899999999999998899999999999999999999998899999999999999999999988899
Q ss_pred cccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcc
Q 002105 343 NLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLV 422 (966)
Q Consensus 343 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 422 (966)
.|..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++. ..+++|+.|++++|+++.. |.. ...+
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~l-~~~---~~~l 403 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVTL-PKI---NLTA 403 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCCC-CCC---CTTC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcccc-ccc---cccc
Confidence 999999999999999999988888999999999999999999853 3378999999999999844 432 5678
Q ss_pred cEEcccCCCCCCccC-cchhccCCCcEecCCCCcCCccCCC--CcCccccccccccccccc-----ccCCCcccCcCCCC
Q 002105 423 YFLDISGNDLSGRIG-EQKWEMTSLQMLNLAGNNFSGKLPD--SFGSDQLENLDLSENRFS-----GTIPRSFGRLSELM 494 (966)
Q Consensus 423 ~~LdLs~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~ 494 (966)
+.|++++|++++... ..+..+++|+.|+|++|++++..+. ....++|+.|+|++|.++ +..|..|..+++|+
T Consensus 404 ~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 483 (844)
T 3j0a_A 404 NLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483 (844)
T ss_dssp CEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEE
T ss_pred ceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccccc
Confidence 999999999997533 2345789999999999999977655 345689999999999997 45567789999999
Q ss_pred EEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCc
Q 002105 495 QLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNH 574 (966)
Q Consensus 495 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~ 574 (966)
.|+|++|++++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|..|. +|+.+++++|+
T Consensus 484 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np 558 (844)
T 3j0a_A 484 VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNK 558 (844)
T ss_dssp CCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEEC
T ss_pred EEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCC
Confidence 999999999999999999999999999999999988777776 8999999999999999998764 78999999999
Q ss_pred ccccCCCC
Q 002105 575 FHGSLPST 582 (966)
Q Consensus 575 l~g~ip~~ 582 (966)
+.|.++..
T Consensus 559 ~~C~c~~~ 566 (844)
T 3j0a_A 559 FICECELS 566 (844)
T ss_dssp CCCSSSCC
T ss_pred cccccccH
Confidence 99988754
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.4e-58 Score=554.05 Aligned_cols=496 Identities=19% Similarity=0.297 Sum_probs=316.0
Q ss_pred HHHHHHHHHHhhcCCCCC--------CCCCCCCCCCCCCcc---cceeeCCCCCEEEEEcCCCCccccccccccCCCCCC
Q 002105 20 GAELELLLSFKSTVNDPY--------NFLSNWDSSVTFCKW---NGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVE 88 (966)
Q Consensus 20 ~~~~~~Ll~~k~~~~~~~--------~~l~~w~~~~~~c~w---~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~ 88 (966)
..|++||.+|+.++.++. ....+|+.+.+||.| .||+|+..+||+.|+|++++++|.+|+++++|++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~ 108 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELE 108 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccce
Confidence 368999999999986442 123489988899999 999999888999999999999999999999999999
Q ss_pred EEEcCCCCC------cc------ccChhhhhcCCCCcEEECCCCCCCCCCCC--C-CCCCCcEEeCCCCCCCCcCCCCcC
Q 002105 89 SINLSSNQL------SG------EIPSDIFSSSNSLRFLNLSNNNFTGPVPI--G-SLSRLEILDLSNNMLSGKIPEEIG 153 (966)
Q Consensus 89 ~L~Ls~N~l------~g------~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~--~-~l~~L~~L~Ls~N~l~~~~p~~~~ 153 (966)
+|||++|.+ .| .+|... +..|+ +++++|.+.+..|. . .+..+..+++....+.. .
T Consensus 109 ~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~---~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~------~ 178 (636)
T 4eco_A 109 VLALGSHGEKVNERLFGPKGISANMSDEQ---KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK------S 178 (636)
T ss_dssp EEESCCGGGGGTCCSBSTTSBCTTCCHHH---HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC------C
T ss_pred EEECcCCccccCCccccccccccCchHHH---HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc------c
Confidence 999999976 34 566655 35566 77777777764442 1 12223333333222211 0
Q ss_pred CCCCcCEEEcc--CCCCcccCCcCCCCCCCCCEEEccCCCCccc-----------------CCcccc--cCCcceEEEcc
Q 002105 154 SFSGLKVLDLG--GNVLVGEIPLSISNITSLQIFTLASNQLIGS-----------------IPREIG--QLRNLKWIYLG 212 (966)
Q Consensus 154 ~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~L~ 212 (966)
....++.+.+. .|.++| +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|+
T Consensus 179 ~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~ 257 (636)
T 4eco_A 179 SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVY 257 (636)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEec
Confidence 11112222222 345555 555555555555555555555553 566655 66666666666
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeeccc-ccc-cCCcCCCCC------CccceEeccccccCCCCCh--hhhcCCCCCEEE
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNN-LTG-QIPPSFGNL------SNLRYLFLYQNKLTGSIPK--SILGLKSLVSFD 282 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~n~l~~~~p~--~l~~l~~L~~L~ 282 (966)
+|.+.+.+|..|+++++|++|++++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .+.++++|++|+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 666666666666666666666666665 555 555555554 56666666666665 5555 566666666666
Q ss_pred ccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCC-ccEEEccCCcCcccCCccccCCC--CCcEEEccCCc
Q 002105 283 LSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPK-LQVLQLWSNQFSGEIPSNLGKQN--NLTVIDLSTNF 359 (966)
Q Consensus 283 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~~~--~L~~L~Ls~N~ 359 (966)
+++|.++|.+| .+..+++|+.|++++|.++ .+|..+..+++ |++|++++|.++ .+|..+.... +|+.|++++|.
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCc
Confidence 66666666666 5666666666666666666 55555666666 666666666665 5555555443 56666666666
Q ss_pred ccccCCCCcc-------CCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCC-------cccEE
Q 002105 360 LTGKIPETLC-------DSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLP-------LVYFL 425 (966)
Q Consensus 360 l~~~~p~~~~-------~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~L~~L 425 (966)
+++.+|..+. .+.+|+.|++++|+++...+..+..+++|++|+|++|+++...+..+.... +|++|
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L 493 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSI 493 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEE
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEE
Confidence 6666666655 555666666666666633333344567777777777777633333333332 77777
Q ss_pred cccCCCCCCccCcchh--ccCCCcEecCCCCcCCccCCC-CcCcccccccccccccccccCCCcccCcCCCCEEEccCCc
Q 002105 426 DISGNDLSGRIGEQKW--EMTSLQMLNLAGNNFSGKLPD-SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNK 502 (966)
Q Consensus 426 dLs~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 502 (966)
+|++|+++ .+|..+. .+++|+.|+|++|++++ +|. +..+++|+.|+|++|+ ++++|+
T Consensus 494 ~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~ 553 (636)
T 4eco_A 494 DLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNR 553 (636)
T ss_dssp ECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCB
T ss_pred ECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCc
Confidence 77777777 4555554 66677777766666665 343 4445555555555544 345677
Q ss_pred cCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcc
Q 002105 503 LFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSG 553 (966)
Q Consensus 503 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g 553 (966)
+.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++..
T Consensus 554 l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 554 TLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred ccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 7777777777777777777777777 56776655 678888888886654
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-56 Score=552.66 Aligned_cols=514 Identities=18% Similarity=0.251 Sum_probs=295.7
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCCCCCCC-----CC--Ccc------------cceeeCCCCCEEEEEcCCCCccccc
Q 002105 17 TCHGAELELLLSFKSTVNDPYNFLSNWDSSV-----TF--CKW------------NGISCQNSTHVNAIELSAKNISGKI 77 (966)
Q Consensus 17 ~~~~~~~~~Ll~~k~~~~~~~~~l~~w~~~~-----~~--c~w------------~gv~c~~~~~v~~L~L~~~~l~~~~ 77 (966)
++..+|++||++||+++.+| +|+.+. +| |.| .||+|+..++|+.|+|++++++|.+
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred ccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 35568999999999999877 786443 55 999 9999998789999999999999999
Q ss_pred cccccCCCCCCEEEc-CCCCCccccChhhhhcCCCCc--------E------EEC-CCCCCCC-------------CCCC
Q 002105 78 SSSIFHLPHVESINL-SSNQLSGEIPSDIFSSSNSLR--------F------LNL-SNNNFTG-------------PVPI 128 (966)
Q Consensus 78 ~~~~~~l~~L~~L~L-s~N~l~g~ip~~~~~~l~~L~--------~------L~L-s~N~l~~-------------~~~~ 128 (966)
|+++++|++|++||| ++|.++|..|.........+. . ++. ....+.+ ++..
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 999998875432110000000 0 000 0000000 0001
Q ss_pred CCCCCCcEEeCCC--CCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCCcccc--cC
Q 002105 129 GSLSRLEILDLSN--NMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIPREIG--QL 203 (966)
Q Consensus 129 ~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~--~l 203 (966)
.....++.+.+.. |++++ +|..|+++++|++|+|++|.+++ .+|..+.. .+.|.+.+.+|..++ ++
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~--------~s~n~~~g~iP~~l~f~~L 490 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED--------ANSDYAKQYENEELSWSNL 490 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC--------TTSHHHHHHTTSCCCGGGC
T ss_pred ccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccc--------cccccccccCChhhhhccC
Confidence 1112222222322 45554 45555555555555555555554 12211111 011222234555554 55
Q ss_pred CcceEEEccCCCCCCCCCcCccCCCCCCEEEeeccc-ccc-cCCcCCCCCC-------ccceEeccccccCCCCCh--hh
Q 002105 204 RNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNN-LTG-QIPPSFGNLS-------NLRYLFLYQNKLTGSIPK--SI 272 (966)
Q Consensus 204 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~n~l~~~~p~--~l 272 (966)
++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .+
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 555555555555555555555555555555555554 554 4444433333 5555555555554 4444 45
Q ss_pred hcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCC-ccEEEccCCcCcccCCccccCCCC--
Q 002105 273 LGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPK-LQVLQLWSNQFSGEIPSNLGKQNN-- 349 (966)
Q Consensus 273 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~~~~-- 349 (966)
.++++|+.|+|++|.++ .+| .+..+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|.++ .+|..+..+..
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSC
T ss_pred hcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCC
Confidence 55555555555555554 444 4444455555555555544 44444444444 555555555544 34444433322
Q ss_pred CcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccc--cCccCceeeccccccCCcCChhhcCCCcccEEcc
Q 002105 350 LTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLS--TCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDI 427 (966)
Q Consensus 350 L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdL 427 (966)
|+.|+|++|.+++.+|... ..+. .+++|+.|+|++|+++...+..+..+++|+.|+|
T Consensus 646 L~~L~Ls~N~l~g~ip~l~---------------------~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~L 704 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNIS---------------------CSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIIL 704 (876)
T ss_dssp EEEEECCSSCTTTTSSSCS---------------------SCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEEC
T ss_pred CCEEECcCCcCCCccccch---------------------hhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEEC
Confidence 4444444444444333211 1111 2336667777777776444444456677777777
Q ss_pred cCCCCCCccCcchhc--------cCCCcEecCCCCcCCccCCC-Cc--CcccccccccccccccccCCCcccCcCCCCEE
Q 002105 428 SGNDLSGRIGEQKWE--------MTSLQMLNLAGNNFSGKLPD-SF--GSDQLENLDLSENRFSGTIPRSFGRLSELMQL 496 (966)
Q Consensus 428 s~N~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~p~-~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 496 (966)
++|+++ .+|..... +++|+.|+|++|+++ .+|. ++ .+++|+.|+|++|++++ +|..+..+++|+.|
T Consensus 705 s~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L 781 (876)
T 4ecn_A 705 SNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAF 781 (876)
T ss_dssp CSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEE
T ss_pred CCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEE
Confidence 777776 33333322 237888888888877 4454 44 66788888888888876 67778888888888
Q ss_pred EccC------CccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeC
Q 002105 497 KISR------NKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNI 570 (966)
Q Consensus 497 ~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~l 570 (966)
+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+..+.....+..+.+
T Consensus 782 ~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L 858 (876)
T 4ecn_A 782 GIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVL 858 (876)
T ss_dssp ECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEE
T ss_pred ECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheee
Confidence 8876 666677777777777777777777777 56666654 46777777777776655555544444455555
Q ss_pred cCCccc
Q 002105 571 SHNHFH 576 (966)
Q Consensus 571 s~N~l~ 576 (966)
.+|.+.
T Consensus 859 ~~n~~~ 864 (876)
T 4ecn_A 859 LYDKTQ 864 (876)
T ss_dssp ECCTTS
T ss_pred cCCCcc
Confidence 555443
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.6e-55 Score=530.63 Aligned_cols=489 Identities=22% Similarity=0.240 Sum_probs=401.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCC--CCCCCCCCCCcEEe
Q 002105 61 THVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTG--PVPIGSLSRLEILD 138 (966)
Q Consensus 61 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~l~~L~~L~ 138 (966)
++++.|+|++|.+++..+.+|.++++|++|+|++|++.+ +++..+..+++|++|+|++|.+++ +.+++.+++|++|+
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~ 135 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF-MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLY 135 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE-ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEE
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccc-cChhhhcccccccEeeccccCcccCCcchhccCCcccEEE
Confidence 478999999999999989999999999999999999995 544567778999999999999997 56789999999999
Q ss_pred CCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCC--EEEccCCCCcccCCcccccCCcceEEEccCCCC
Q 002105 139 LSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQ--IFTLASNQLIGSIPREIGQLRNLKWIYLGYNNL 216 (966)
Q Consensus 139 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 216 (966)
|++|.+++..+..+..+++|++|++++|.+.+..|..|+.+++|+ .|++++|.+.+..|..+. ..+|++|++++|.
T Consensus 136 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~- 213 (606)
T 3t6q_A 136 LGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQ- 213 (606)
T ss_dssp CCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCS-
T ss_pred CCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCch-
Confidence 999999985545555699999999999999988888899999999 999999999987777665 4689999999986
Q ss_pred CCCCCcCccCCCCCCEEEeecccccc-----cCCcCCCCCC--ccceEeccccccCCCCChhhhcCCCCCEEEccCCcCc
Q 002105 217 SGEIPKEIGDLTSLNHLDLVYNNLTG-----QIPPSFGNLS--NLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLS 289 (966)
Q Consensus 217 ~~~~p~~l~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~--~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 289 (966)
.++..+..+..+....+..+.+.. ..+..|..+. +|++|++++|.+++..+..|..+++|++|++++|.++
T Consensus 214 --~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 291 (606)
T 3t6q_A 214 --NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS 291 (606)
T ss_dssp --CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS
T ss_pred --hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC
Confidence 344445555555544444333221 1122333333 6788888888888777777888888888888888887
Q ss_pred ccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCcc-ccCCCCCcEEEccCCcccccC--CC
Q 002105 290 GEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSN-LGKQNNLTVIDLSTNFLTGKI--PE 366 (966)
Q Consensus 290 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~L~~L~Ls~N~l~~~~--p~ 366 (966)
.+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.+.+|.. +..+++|+.|++++|.+++.. |.
T Consensus 292 -~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 370 (606)
T 3t6q_A 292 -ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNL 370 (606)
T ss_dssp -CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTT
T ss_pred -CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcch
Confidence 66777888888888888888888777777888888888888888887666553 778888888888888887765 67
Q ss_pred CccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCCh-hhcCCCcccEEcccCCCCCCccCcchhccCC
Q 002105 367 TLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSS-EFTRLPLVYFLDISGNDLSGRIGEQKWEMTS 445 (966)
Q Consensus 367 ~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~ 445 (966)
.+..+++|+.|++++|++.+..|..+..+++|++|++++|++.+..+. .+..+++|++|++++|.+++..+..+..+++
T Consensus 371 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 450 (606)
T 3t6q_A 371 QLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPA 450 (606)
T ss_dssp TTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTT
T ss_pred hcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCC
Confidence 778888888888888888888888888888888888888888877654 4788888888888888888888888888888
Q ss_pred CcEecCCCCcCCcc-CC--C-CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccc
Q 002105 446 LQMLNLAGNNFSGK-LP--D-SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLD 521 (966)
Q Consensus 446 L~~L~Ls~N~l~~~-~p--~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (966)
|++|++++|++++. +| . +..+++|++|++++|++++..|..|..+++|+.|+|++|++++..|..+..+++| .|+
T Consensus 451 L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~ 529 (606)
T 3t6q_A 451 LQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLN 529 (606)
T ss_dssp CCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEE
T ss_pred CCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEE
Confidence 88888888888763 22 2 4466889999999999998889999999999999999999999999999999999 999
Q ss_pred cCCceeccccCccCCCCCCCcEEeCCCCcCcccCC
Q 002105 522 LSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIP 556 (966)
Q Consensus 522 Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p 556 (966)
|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 530 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 530 LASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999998888888999999999999999987655
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.8e-55 Score=527.69 Aligned_cols=510 Identities=21% Similarity=0.204 Sum_probs=416.5
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeC
Q 002105 62 HVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDL 139 (966)
Q Consensus 62 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~L 139 (966)
+++.|+|++|.+++..+.+|.++++|++|+|++|+++ .+++..|..+++|++|+|++|.+++..| ++.+++|++|+|
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccc-ccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 5778888888888777777888888888888888887 4555556667888888888888876433 577888888888
Q ss_pred CCCCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcce----EEEccCC
Q 002105 140 SNNMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLK----WIYLGYN 214 (966)
Q Consensus 140 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~L~~N 214 (966)
++|.+++..+..++++++|++|+|++|.+.+ .+|..|+++++|++|++++|++++..|..++.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 8888877666778888888888888888765 5677788888888888888888877777777766654 6888888
Q ss_pred CCCCCCCcCccCCCCCCEEEeeccccc-ccCCcCCCCCCccceEeccccccCC------CCChhhhcCC--CCCEEEc-c
Q 002105 215 NLSGEIPKEIGDLTSLNHLDLVYNNLT-GQIPPSFGNLSNLRYLFLYQNKLTG------SIPKSILGLK--SLVSFDL-S 284 (966)
Q Consensus 215 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~n~l~~------~~p~~l~~l~--~L~~L~L-s 284 (966)
.+++..+..+... +|++|++++|.+. +.+|..++++++|+.+++..+.+.+ ..+..+.++. +++.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 8775554444444 7888888888776 3456667777778777776554432 1112222222 3556666 7
Q ss_pred CCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccC
Q 002105 285 DNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKI 364 (966)
Q Consensus 285 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~ 364 (966)
.|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+ +.+| .+ .+++|+.|++++|...+.+
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC
T ss_pred cccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch
Confidence 7888888877 8899999999999999974 55 788999999999999999 6788 45 8999999999999766544
Q ss_pred CCCccCCCCccEEEccCCCCCCC--CCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccC-cchh
Q 002105 365 PETLCDSGSLFKLILFSNSLEGK--IPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIG-EQKW 441 (966)
Q Consensus 365 p~~~~~~~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~-~~~~ 441 (966)
.+..+++|+.|++++|++++. +|..+..+++|++|++++|.+.+ +|..|..+++|+.|++++|++.+..+ ..+.
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 567889999999999999876 47888999999999999999986 45788999999999999999998887 6788
Q ss_pred ccCCCcEecCCCCcCCccCCC-CcCcccccccccccccccc-cCCCcccCcCCCCEEEccCCccCCCChhhccccccccc
Q 002105 442 EMTSLQMLNLAGNNFSGKLPD-SFGSDQLENLDLSENRFSG-TIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVS 519 (966)
Q Consensus 442 ~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 519 (966)
.+++|++|++++|.+++..|. +..+++|++|++++|.+++ .+|..|..+++|+.|+|++|++++..|..+..+++|+.
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 999999999999999998887 4577999999999999998 47899999999999999999999999999999999999
Q ss_pred cccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCC-CCCeeeCcCCcccccCCCCC
Q 002105 520 LDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVA-SLVQVNISHNHFHGSLPSTG 583 (966)
Q Consensus 520 L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~-~L~~l~ls~N~l~g~ip~~~ 583 (966)
|+|++|++++.+|..+..+++|+.|||++|+++ .+|..+..++ +|+++++++|++.+.++...
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred EECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 999999999999999999999999999999999 6777798887 59999999999999887543
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-53 Score=517.47 Aligned_cols=485 Identities=21% Similarity=0.247 Sum_probs=424.8
Q ss_pred CCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCC--CCCCCCCCCcEE
Q 002105 60 STHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGP--VPIGSLSRLEIL 137 (966)
Q Consensus 60 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~l~~L~~L 137 (966)
.++++.|+|++|.+++..+.+|.++++|++|+|++|.+++ +++..|..+++|++|+|++|.+++. .+++.+++|++|
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 133 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS-FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKL 133 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC-CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc-cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEE
Confidence 3489999999999999889999999999999999999984 5455677789999999999999863 457999999999
Q ss_pred eCCCCCCCC-cCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCC----EEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 138 DLSNNMLSG-KIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQ----IFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 138 ~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
+|++|.+++ .+|..++++++|++|+|++|.+.+..|..|+.+++|+ +|++++|.+++..+..+... +|++|+++
T Consensus 134 ~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~ 212 (606)
T 3vq2_A 134 NVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLR 212 (606)
T ss_dssp ECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEE
T ss_pred eCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeecc
Confidence 999999986 6799999999999999999999998888888777665 89999999997666655544 99999999
Q ss_pred CCCCC-CCCCcCccCCCCCCEEEeeccccccc------CCcCCCCCC--ccceEec-cccccCCCCChhhhcCCCCCEEE
Q 002105 213 YNNLS-GEIPKEIGDLTSLNHLDLVYNNLTGQ------IPPSFGNLS--NLRYLFL-YQNKLTGSIPKSILGLKSLVSFD 282 (966)
Q Consensus 213 ~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~------~p~~~~~l~--~L~~L~L-~~n~l~~~~p~~l~~l~~L~~L~ 282 (966)
+|.++ +..|..+.+++.|+.+++..+.+.+. .+..+..+. +++.+++ ..|.+.+.+|. +..+++|+.|+
T Consensus 213 ~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~ 291 (606)
T 3vq2_A 213 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMS 291 (606)
T ss_dssp SCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEE
T ss_pred CCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEE
Confidence 99987 45677789999999999987665431 112222332 4667777 67788887777 99999999999
Q ss_pred ccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccc
Q 002105 283 LSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTG 362 (966)
Q Consensus 283 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~ 362 (966)
+++|.+. .+| .+..+++|+.|++++|.+ +.+|. + .+++|+.|++++|...+.+ .+..+++|+.|++++|.+++
T Consensus 292 l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~-~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 364 (606)
T 3vq2_A 292 LAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPT-L-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSF 364 (606)
T ss_dssp EESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCC-C-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEE
T ss_pred ecCccch-hhh-hccccccCCEEEcccccC-ccccc-C-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCC
Confidence 9999996 455 888999999999999999 67884 5 8999999999999766554 67789999999999999987
Q ss_pred c--CCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCC-hhhcCCCcccEEcccCCCCCCccCcc
Q 002105 363 K--IPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELS-SEFTRLPLVYFLDISGNDLSGRIGEQ 439 (966)
Q Consensus 363 ~--~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~LdLs~N~l~~~~~~~ 439 (966)
. +|..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|++.+..+ ..|..+++|++|++++|.+++..|..
T Consensus 365 ~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 443 (606)
T 3vq2_A 365 SGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGI 443 (606)
T ss_dssp EEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred CcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhh
Confidence 6 48888999999999999999886 56889999999999999999999988 78999999999999999999999999
Q ss_pred hhccCCCcEecCCCCcCCcc-CCC-CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccc
Q 002105 440 KWEMTSLQMLNLAGNNFSGK-LPD-SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKL 517 (966)
Q Consensus 440 ~~~l~~L~~L~Ls~N~l~~~-~p~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 517 (966)
+..+++|++|++++|.+++. +|. +..+++|++|++++|++++..|..|..+++|+.|+|++|++++.+|..+..+++|
T Consensus 444 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 523 (606)
T 3vq2_A 444 FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSL 523 (606)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTC
T ss_pred hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcC
Confidence 99999999999999999984 666 4578999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceeccccCccCCCCC-CCcEEeCCCCcCcccCC
Q 002105 518 VSLDLSNNQLSGHIPASLSEMP-VLGQLDLSENQLSGKIP 556 (966)
Q Consensus 518 ~~L~Ls~N~l~~~~p~~l~~l~-~L~~LdLs~N~l~g~~p 556 (966)
+.|+|++|+++ .+|..+..++ +|+.|++++|++.+..+
T Consensus 524 ~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 524 STLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999999 6777798887 69999999999997655
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-52 Score=523.12 Aligned_cols=514 Identities=21% Similarity=0.208 Sum_probs=446.2
Q ss_pred EEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC---CCCCCCCCcEEeCCC
Q 002105 65 AIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV---PIGSLSRLEILDLSN 141 (966)
Q Consensus 65 ~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~---~~~~l~~L~~L~Ls~ 141 (966)
..|.++++++.. |. -.++|++|||++|.|++ +++..|..+++|++|+|++|.+.+.+ .++++++|++|+|++
T Consensus 8 ~~dcs~~~L~~v-P~---lp~~l~~LdLs~N~i~~-i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 8 IAFYRFCNLTQV-PQ---VLNTTERLLLSFNYIRT-VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEESCCCSSCC-CS---SCTTCCEEEEESCCCCE-ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred EEEccCCCCCCC-CC---CCCCcCEEECCCCcCCc-cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 346667788754 43 45789999999999984 55556788899999999999777644 368999999999999
Q ss_pred CCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcC--CCCCCCCCEEEccCCCCcccCC-cccccCCcceEEEccCCCCCC
Q 002105 142 NMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLS--ISNITSLQIFTLASNQLIGSIP-REIGQLRNLKWIYLGYNNLSG 218 (966)
Q Consensus 142 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ 218 (966)
|.+++..|+.|+++++|++|+|++|.+.+.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999999999999999999999999999877765 9999999999999999988755 579999999999999999999
Q ss_pred CCCcCccCC--CCCCEEEeecccccccCCcCCCCCCc------cceEeccccccCCCCChhhhcC---CCCCEEEccCC-
Q 002105 219 EIPKEIGDL--TSLNHLDLVYNNLTGQIPPSFGNLSN------LRYLFLYQNKLTGSIPKSILGL---KSLVSFDLSDN- 286 (966)
Q Consensus 219 ~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N- 286 (966)
..|..+..+ ++|+.|+++.|.+.+..|..++.+++ |++|++++|.+++..+..+... ..++.|.++.+
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 999999888 89999999999999988888877766 9999999999998888877654 57888888733
Q ss_pred --------cCcccCchhhcCC--CCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEcc
Q 002105 287 --------YLSGEIPEEVIQL--QNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLS 356 (966)
Q Consensus 287 --------~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls 356 (966)
.+.+..+..+..+ ++|+.|++++|.+.+..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|+
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEE
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECC
Confidence 3333344455554 689999999999999889999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCcc
Q 002105 357 TNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRI 436 (966)
Q Consensus 357 ~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 436 (966)
+|.+++..|..+..+++|+.|++++|++.+..+..|..+++|++|+|++|.+++.. .+++|+.|++++|+++..
T Consensus 323 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l- 396 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVTL- 396 (844)
T ss_dssp SCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCCC-
T ss_pred CCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcccc-
Confidence 99999999999999999999999999999988889999999999999999998643 388999999999999854
Q ss_pred CcchhccCCCcEecCCCCcCCccCCC--CcCcccccccccccccccccCCC-cccCcCCCCEEEccCCccC-----CCCh
Q 002105 437 GEQKWEMTSLQMLNLAGNNFSGKLPD--SFGSDQLENLDLSENRFSGTIPR-SFGRLSELMQLKISRNKLF-----GDIP 508 (966)
Q Consensus 437 ~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p 508 (966)
|.. ..+++.|++++|++++.... ...+++|+.|+|++|++++..+. .+..+++|+.|+|++|.+. +..|
T Consensus 397 ~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 473 (844)
T 3j0a_A 397 PKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473 (844)
T ss_dssp CCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCS
T ss_pred ccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccch
Confidence 432 56899999999999975332 33778999999999999976554 4667899999999999997 4556
Q ss_pred hhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCCCccCCC
Q 002105 509 EELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPSTGAFLAI 588 (966)
Q Consensus 509 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~~~~~ 588 (966)
..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|..+. ++|+.||+++|++++.+|.. +..+
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L 549 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSL 549 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSC
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCc
Confidence 7789999999999999999999999999999999999999999998887776 89999999999999998854 4456
Q ss_pred ccccccCC
Q 002105 589 NATAVAGN 596 (966)
Q Consensus 589 ~~~~~~gn 596 (966)
....+.+|
T Consensus 550 ~~l~l~~N 557 (844)
T 3j0a_A 550 SVLDITHN 557 (844)
T ss_dssp CEEEEEEE
T ss_pred CEEEecCC
Confidence 66666676
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=475.64 Aligned_cols=486 Identities=22% Similarity=0.217 Sum_probs=423.9
Q ss_pred CCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC--CCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEcc
Q 002105 87 VESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV--PIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLG 164 (966)
Q Consensus 87 L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 164 (966)
.+.++-++.+++ .||..+. +++++|+|++|.+++.. .+..+++|++|||++|++++..|..|.++++|++|+|+
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~---~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC---SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEeCCCCcc-ccCCCcc---ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCc
Confidence 466888888887 7887542 68999999999998743 46899999999999999999888999999999999999
Q ss_pred CCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCC-CCCcCccCCCCCCEEEeeccccccc
Q 002105 165 GNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSG-EIPKEIGDLTSLNHLDLVYNNLTGQ 243 (966)
Q Consensus 165 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~ 243 (966)
+|.+.+..|..|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 999998888999999999999999999998776679999999999999999987 5799999999999999999999988
Q ss_pred CCcCCCCCCcc----ceEeccccccCCCCChhhhcCCCCCEEEccCCcCcc-cCchhhcCCCC-----------------
Q 002105 244 IPPSFGNLSNL----RYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSG-EIPEEVIQLQN----------------- 301 (966)
Q Consensus 244 ~p~~~~~l~~L----~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~----------------- 301 (966)
.|..++.+++| ++|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++
T Consensus 165 ~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l 243 (570)
T 2z63_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNL 243 (570)
T ss_dssp CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSC
T ss_pred cHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhh
Confidence 88889989888 899999999998888877765 79999999885332 12222222222
Q ss_pred ---------------CceecccCC-CCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCC
Q 002105 302 ---------------LEILHLFSN-NFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIP 365 (966)
Q Consensus 302 ---------------L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p 365 (966)
++.++++++ .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|
T Consensus 244 ~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~ 320 (570)
T 2z63_A 244 EKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFP 320 (570)
T ss_dssp EECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCC
T ss_pred hhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccC
Confidence 344555555 667778888999999999999999998 578888888 9999999999998 556
Q ss_pred CCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcC--ChhhcCCCcccEEcccCCCCCCccCcchhcc
Q 002105 366 ETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGEL--SSEFTRLPLVYFLDISGNDLSGRIGEQKWEM 443 (966)
Q Consensus 366 ~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l 443 (966)
. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+. +..+
T Consensus 321 ~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l 395 (570)
T 2z63_A 321 T--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGL 395 (570)
T ss_dssp B--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETC
T ss_pred c--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-cccc
Confidence 5 4678899999999999887765 78899999999999998765 77889999999999999999876655 8889
Q ss_pred CCCcEecCCCCcCCccCCC--CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccC-CCChhhcccccccccc
Q 002105 444 TSLQMLNLAGNNFSGKLPD--SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLF-GDIPEELSSCKKLVSL 520 (966)
Q Consensus 444 ~~L~~L~Ls~N~l~~~~p~--~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 520 (966)
++|+.|++++|.+++..|. +..+++|++|++++|.+++..|..|..+++|+.|++++|++. +.+|..+..+++|+.|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 9999999999999987763 457789999999999999999999999999999999999998 6789999999999999
Q ss_pred ccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCCCcc
Q 002105 521 DLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPSTGAF 585 (966)
Q Consensus 521 ~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~~ 585 (966)
+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.+++++|+++|.+|....+
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 540 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 540 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHH
Confidence 99999999999999999999999999999999998888999999999999999999999876543
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1e-49 Score=476.86 Aligned_cols=490 Identities=21% Similarity=0.236 Sum_probs=355.9
Q ss_pred CCcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC-
Q 002105 49 FCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP- 127 (966)
Q Consensus 49 ~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~- 127 (966)
.|.|.|+ |+ .++++++ .+|+.+. ++|++|||++|++++ +++..|..+++|++|+|++|++++..|
T Consensus 3 ~C~~~~~-c~---------~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CD---------GRSRSFT-SIPSGLT--AAMKSLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EE---------CTTSCCS-SCCSCCC--TTCCEEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EE---------CCCCccc-cccccCC--CCccEEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 84 3456666 4555553 789999999999984 544556777999999999999887543
Q ss_pred -CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCC-cccccCC
Q 002105 128 -IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIP-REIGQLR 204 (966)
Q Consensus 128 -~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~ 204 (966)
++.+++|++|||++|++++..|..|+.+++|++|+|++|.+.+ ..|..++++++|++|++++|.+.+.+| ..+.+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 6888899999999999988777778899999999999998876 456788889999999999888544454 5788888
Q ss_pred cceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcC-CCCCCccceEeccccccCCCC--C-hhhhcCCCCCE
Q 002105 205 NLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPS-FGNLSNLRYLFLYQNKLTGSI--P-KSILGLKSLVS 280 (966)
Q Consensus 205 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~--p-~~l~~l~~L~~ 280 (966)
+|++|++++|.+++..|..++.+++|++|+++.|.+.. +|.. +..+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 99999999998888888888888889999998888763 3333 356888889999888887642 1 22345678888
Q ss_pred EEccCCcCcccCchhh----cCCCCCceecccCCCCCCCC------CCCCCCCCCccEEEccCCcCcccCCccccCCCCC
Q 002105 281 FDLSDNYLSGEIPEEV----IQLQNLEILHLFSNNFTGKI------PSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNL 350 (966)
Q Consensus 281 L~Ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~------p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L 350 (966)
|++++|.+++..+..+ ..+++|+.+++++|.+.+.. ...+..+++|+.|++.++.+.... .+.
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~----- 300 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFY--LFY----- 300 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGG--GSC-----
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhh--hcc-----
Confidence 8888888876554433 45677888888887766531 122344556666666655443210 000
Q ss_pred cEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCcc-ccCccCceeeccccccCCcCCh---hhcCCCcccEEc
Q 002105 351 TVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSL-STCKSLRRVRLQNNRLSGELSS---EFTRLPLVYFLD 426 (966)
Q Consensus 351 ~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~Ld 426 (966)
.++..+...++|+.|++++|.++ .+|..+ ..+++|++|++++|++.+.+|. .+..+++|++|+
T Consensus 301 ------------~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~ 367 (549)
T 2z81_A 301 ------------DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367 (549)
T ss_dssp ------------CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEE
T ss_pred ------------cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEE
Confidence 01111122345566666666654 344444 4577777777777777765543 356677777777
Q ss_pred ccCCCCCCccC--cchhccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccC
Q 002105 427 ISGNDLSGRIG--EQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLF 504 (966)
Q Consensus 427 Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (966)
+++|++++..+ ..+..+++|++|++++|++++..+.+..+++|++|++++|++++ +|..+ .++|+.|+|++|+++
T Consensus 368 Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 368 LSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLD 444 (549)
T ss_dssp CTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCS
T ss_pred ccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChh
Confidence 77777776532 44667777888888888777433334556778888888888763 34333 258899999999988
Q ss_pred CCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCC
Q 002105 505 GDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPST 582 (966)
Q Consensus 505 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~ 582 (966)
+.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|||++|++++.+|..+..+++|+.|++++|++.|.+|..
T Consensus 445 ~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 445 SFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp CCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred hhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 753 57889999999999998 6776 467899999999999999999988999999999999999999988743
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-49 Score=473.45 Aligned_cols=486 Identities=22% Similarity=0.244 Sum_probs=403.3
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC--CCCCCCCCcEEeC
Q 002105 62 HVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV--PIGSLSRLEILDL 139 (966)
Q Consensus 62 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~L 139 (966)
+++.|||++|.+++..+.+|..+++|++|||++|+++ .+++..|..+++|++|+|++|++++.. .++.+++|++|++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 6788888888888877778888888888888888887 566667777788888888888887643 3678888888888
Q ss_pred CCCCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcc----eEEEccCC
Q 002105 140 SNNMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNL----KWIYLGYN 214 (966)
Q Consensus 140 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L----~~L~L~~N 214 (966)
++|++++..+..++.+++|++|+|++|.+.+ .+|..|+++++|++|++++|++++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 8888887666678888888888888888876 468888888888888888888888777788888887 78888888
Q ss_pred CCCCCCCcCccCCCCCCEEEeecccccc-cCCcCCCCCCccceEeccccccC------CCCChhhhcCCC--CCEEEccC
Q 002105 215 NLSGEIPKEIGDLTSLNHLDLVYNNLTG-QIPPSFGNLSNLRYLFLYQNKLT------GSIPKSILGLKS--LVSFDLSD 285 (966)
Q Consensus 215 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~------~~~p~~l~~l~~--L~~L~Ls~ 285 (966)
.+++..|..+..+ +|+.|++++|.... .++..+..+++++.+.+....+. ......+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 8887777777665 78888888874432 23445566666666655443322 112223333333 56777777
Q ss_pred C-cCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccC
Q 002105 286 N-YLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKI 364 (966)
Q Consensus 286 N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~ 364 (966)
+ .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 7 777888889999999999999999998 578888888 9999999999998 5665 57889999999999998777
Q ss_pred CCCccCCCCccEEEccCCCCCCCC--CCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccC-cchh
Q 002105 365 PETLCDSGSLFKLILFSNSLEGKI--PNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIG-EQKW 441 (966)
Q Consensus 365 p~~~~~~~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~-~~~~ 441 (966)
+. ..+++|+.|++++|++++.. |..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 66 67889999999999998654 67788999999999999999987666 9999999999999999998766 5678
Q ss_pred ccCCCcEecCCCCcCCccCCCC-cCccccccccccccccc-ccCCCcccCcCCCCEEEccCCccCCCChhhccccccccc
Q 002105 442 EMTSLQMLNLAGNNFSGKLPDS-FGSDQLENLDLSENRFS-GTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVS 519 (966)
Q Consensus 442 ~l~~L~~L~Ls~N~l~~~~p~~-~~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 519 (966)
.+++|++|++++|.+.+..|.. .++++|++|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 8999999999999999988874 46899999999999998 689999999999999999999999999999999999999
Q ss_pred cccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCc
Q 002105 520 LDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQ 557 (966)
Q Consensus 520 L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~ 557 (966)
|+|++|++++..|..+..+++|+.|++++|++++..|.
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999888999999999999999999998774
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-50 Score=488.62 Aligned_cols=448 Identities=22% Similarity=0.324 Sum_probs=308.6
Q ss_pred CCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCC------CC------cCCCCcCCCCCcCEEEccCCCCcccCCcCC
Q 002105 111 SLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNML------SG------KIPEEIGSFSGLKVLDLGGNVLVGEIPLSI 176 (966)
Q Consensus 111 ~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 176 (966)
+++.|+|++|.++|.+| ++.|++|++|||++|.+ .+ .+|... +..|+ +++++|.+.+.+|..+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~ 158 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDF 158 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGS
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhH
Confidence 56667777776666444 46666666666666654 11 222222 34455 5556665555555544
Q ss_pred CCC-CCCCEEEccCCCCcccCCcccccCCcceEEEcc--CCCCCCCCCcCccCCCCCCEEEeeccccccc----------
Q 002105 177 SNI-TSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG--YNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQ---------- 243 (966)
Q Consensus 177 ~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~--~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---------- 243 (966)
..+ ..+..+++....+.. .....++.+.+. .|.+++ +|..++++++|++|+|++|.+++.
T Consensus 159 ~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 159 SDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp CHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred HHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 411 111111111111000 001112222222 456666 666677777777777777776664
Q ss_pred -------CCcCCC--CCCccceEeccccccCCCCChhhhcCCCCCEEEccCCc-Ccc-cCchhhcCC------CCCceec
Q 002105 244 -------IPPSFG--NLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNY-LSG-EIPEEVIQL------QNLEILH 306 (966)
Q Consensus 244 -------~p~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~ 306 (966)
+|..++ ++++|++|+|++|++.+.+|..++++++|++|++++|. ++| .+|..+..+ ++|+.|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 677766 77777777777777777777777777777777777776 666 666666655 6777777
Q ss_pred ccCCCCCCCCCC--CCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCC-ccEEEccCCC
Q 002105 307 LFSNNFTGKIPS--SLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGS-LFKLILFSNS 383 (966)
Q Consensus 307 L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~-L~~L~l~~N~ 383 (966)
+++|+++ .+|. .++++++|+.|++++|+++|.+| .++.+++|+.|++++|.++ .+|..+..+++ |+.|++++|+
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 7777777 5666 67777777777777777777777 6777777777777777777 66666777777 7777777777
Q ss_pred CCCCCCCccccCc--cCceeeccccccCCcCChhhc-------CCCcccEEcccCCCCCCccCcchhccCCCcEecCCCC
Q 002105 384 LEGKIPNSLSTCK--SLRRVRLQNNRLSGELSSEFT-------RLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGN 454 (966)
Q Consensus 384 l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N 454 (966)
++ .+|..+..++ +|++|++++|++++.+|..|. .+++|++|++++|+++...+..+..+++|++|+|++|
T Consensus 389 l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 389 LK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGN 467 (636)
T ss_dssp CS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSS
T ss_pred Cc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCC
Confidence 77 5666666544 777777777777777777776 6777888888888887544444455788888888888
Q ss_pred cCCccCCC-CcCc--------ccccccccccccccccCCCccc--CcCCCCEEEccCCccCCCChhhcccccccccccc-
Q 002105 455 NFSGKLPD-SFGS--------DQLENLDLSENRFSGTIPRSFG--RLSELMQLKISRNKLFGDIPEELSSCKKLVSLDL- 522 (966)
Q Consensus 455 ~l~~~~p~-~~~~--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L- 522 (966)
+++ .+|. .+.. ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 468 ~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls 544 (636)
T 4eco_A 468 MLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIR 544 (636)
T ss_dssp CCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECC
T ss_pred CCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECC
Confidence 887 4444 4432 27888899998888 6777776 88899999999999987 8888888999999988
Q ss_pred -----CCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCccccc
Q 002105 523 -----SNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGS 578 (966)
Q Consensus 523 -----s~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ 578 (966)
++|++.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|+.|++++|++...
T Consensus 545 ~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 545 NQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp SCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEE
T ss_pred CCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccc
Confidence 56889999999999999999999999999 78898876 7999999999988743
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.3e-49 Score=470.72 Aligned_cols=474 Identities=20% Similarity=0.208 Sum_probs=310.8
Q ss_pred CEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCC
Q 002105 88 ESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNV 167 (966)
Q Consensus 88 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 167 (966)
.+.|.++|.++ .||..++ ++|++|+|++|+++ +..|..|.++++|++|+|++|.
T Consensus 8 ~~c~~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~----------------------~~~~~~~~~l~~L~~L~Ls~n~ 61 (549)
T 2z81_A 8 GVCDGRSRSFT-SIPSGLT---AAMKSLDLSFNKIT----------------------YIGHGDLRACANLQVLILKSSR 61 (549)
T ss_dssp SEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC----------------------EECSSTTSSCTTCCEEECTTSC
T ss_pred ceEECCCCccc-cccccCC---CCccEEECcCCccC----------------------ccChhhhhcCCcccEEECCCCC
Confidence 34566677776 5665443 44555555555554 4444444445555555555555
Q ss_pred CcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCC-CCCcCccCCCCCCEEEeecccccccCC-
Q 002105 168 LVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSG-EIPKEIGDLTSLNHLDLVYNNLTGQIP- 245 (966)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p- 245 (966)
+.+..|..|+++++|++|++++|++++..|..|+++++|++|++++|.+++ ..|..++++++|++|++++|.+.+.+|
T Consensus 62 i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 62 INTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH
Confidence 444444445555555555555555544444445555555555555555543 234445555555555555555322222
Q ss_pred cCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchh-hcCCCCCceecccCCCCCCCC--C-CCCC
Q 002105 246 PSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEE-VIQLQNLEILHLFSNNFTGKI--P-SSLA 321 (966)
Q Consensus 246 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p-~~l~ 321 (966)
..|.++++|++|++++|++++..|..+..+++|++|+++.|.+.. +|.. +..+++|+.|++++|++++.. | ....
T Consensus 142 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 220 (549)
T 2z81_A 142 IDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDE 220 (549)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCC
T ss_pred hhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhh
Confidence 345555555555555555555555555555555555555555442 2222 234556666666666655431 1 1223
Q ss_pred CCCCccEEEccCCcCcccCC----ccccCCCCCcEEEccCCcccccC------CCCccCCCCccEEEccCCCCCCC----
Q 002105 322 SMPKLQVLQLWSNQFSGEIP----SNLGKQNNLTVIDLSTNFLTGKI------PETLCDSGSLFKLILFSNSLEGK---- 387 (966)
Q Consensus 322 ~l~~L~~L~L~~N~l~~~~p----~~~~~~~~L~~L~Ls~N~l~~~~------p~~~~~~~~L~~L~l~~N~l~~~---- 387 (966)
.+++|+.|++++|.+++..+ ..+..+.+|+.+++++|.+.+.. ...+..+++++.|.+.++.+...
T Consensus 221 ~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 300 (549)
T 2z81_A 221 VSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFY 300 (549)
T ss_dssp CCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSC
T ss_pred hhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcc
Confidence 46677777777777765433 23455677778888877776531 12345667788888888766432
Q ss_pred -CCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCc---chhccCCCcEecCCCCcCCccCC--
Q 002105 388 -IPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGE---QKWEMTSLQMLNLAGNNFSGKLP-- 461 (966)
Q Consensus 388 -~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p-- 461 (966)
++..+..+.+|+.|++++|++.......+..+++|++|++++|++++.+|. .+..+++|++|+|++|++++..+
T Consensus 301 ~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 380 (549)
T 2z81_A 301 DLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTG 380 (549)
T ss_dssp CCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHH
T ss_pred cchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccch
Confidence 222234467899999999999844434446899999999999999987643 36788999999999999987543
Q ss_pred C-CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCC
Q 002105 462 D-SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPV 540 (966)
Q Consensus 462 ~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 540 (966)
. +..+++|++|++++|+++ .+|..+..+++|+.|++++|++++ +|..+ .++|++|+|++|++++.+ ..+++
T Consensus 381 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~ 452 (549)
T 2z81_A 381 EILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPR 452 (549)
T ss_dssp HHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTT
T ss_pred hhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCCh
Confidence 2 456789999999999999 688899999999999999999974 44443 268999999999999753 57899
Q ss_pred CcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCC-CccCCCccccccCCCC
Q 002105 541 LGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPST-GAFLAINATAVAGNDL 598 (966)
Q Consensus 541 L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~gn~l 598 (966)
|+.|+|++|+++ .+|. ...+++|+.|++++|++++.+|.. ..+..+....+.+|.+
T Consensus 453 L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 453 LQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509 (549)
T ss_dssp CCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCB
T ss_pred hcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCc
Confidence 999999999999 6776 578999999999999999987753 4556667777888854
No 18
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.9e-49 Score=431.33 Aligned_cols=241 Identities=19% Similarity=0.323 Sum_probs=192.2
Q ss_pred ccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 689 TSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
..+|+|+||.||+|+.. .++..||||++........++|.+|++.+.+ ++|||||+++|+|.+++..|||||||
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~-l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM-LQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 35799999999999863 3578999999976655556779999998888 69999999999999999999999999
Q ss_pred CCCCHHHHHHc------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEe
Q 002105 764 EGKELSEVLRN------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLS 825 (966)
Q Consensus 764 ~~g~L~~~l~~------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~ 825 (966)
++|+|.++++. ++|.++.+|+.|||+||+||| +.+||||||||+|||+|++ ..+|++
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~--~~~Ki~ 200 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQG--LVVKIG 200 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETT--TEEEEC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCC--CcEEEc
Confidence 99999999852 789999999999999999999 4589999999999999965 467999
Q ss_pred ccccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhc
Q 002105 826 VPGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYS 896 (966)
Q Consensus 826 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 896 (966)
|||++... .....||+.|||||++.+..|+.|+|||||||++|||+| |+.||.... ...+.+.+..
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~~~i~~--- 275 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--NTEAIDCITQ--- 275 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--HHHHHHHHHH---
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--HHHHHHHHHc---
Confidence 99998642 123568999999999999999999999999999999999 899997532 1222222221
Q ss_pred cCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 897 DCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 897 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
+.. +..+..++ .++.+++.+||+.||++||||+||+++|+.+.+
T Consensus 276 g~~------~~~p~~~~------~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GRE------LERPRACP------PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TCC------CCCCTTCC------HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCC------CCCccccc------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 111 11111222 356778899999999999999999999999444
No 19
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5e-49 Score=427.71 Aligned_cols=242 Identities=19% Similarity=0.346 Sum_probs=194.3
Q ss_pred ccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 689 TSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
..+|+|+||.||+|+.. .++..||||++........++|.+|+..+.+ ++|||||+++|+|.+++..|||||||
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~-l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN-LQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHh-CCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 45799999999999864 3578899999976655556779999998888 69999999999999999999999999
Q ss_pred CCCCHHHHHH----------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecc
Q 002105 764 EGKELSEVLR----------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVP 827 (966)
Q Consensus 764 ~~g~L~~~l~----------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~ 827 (966)
++|+|.++|+ .++|.++.+|+.|||+||+||| +.+||||||||+|||+|++. .+|++||
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~--~~Ki~DF 172 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL--LVKIGDF 172 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG--CEEECCC
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCC--cEEECCc
Confidence 9999999995 3899999999999999999999 45899999999999999764 5799999
Q ss_pred ccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccC
Q 002105 828 GLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDC 898 (966)
Q Consensus 828 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 898 (966)
|++... .....||+.|||||++.+..|+.|+|||||||++|||+| |+.||.+.. ...+...+. .+.
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~~~i~---~~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--NNEVIECIT---QGR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHH---HTC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH---cCC
Confidence 998532 223468999999999999999999999999999999999 899997532 222222222 111
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 899 HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 899 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.. ..+..++ .++.+++.+||+.||++||||+||++.|+++.+.
T Consensus 248 ~~------~~p~~~~------~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VL------QRPRTCP------QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CC------CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC------CCCccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11 1111222 3567788999999999999999999999994443
No 20
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-48 Score=425.42 Aligned_cols=240 Identities=22% Similarity=0.335 Sum_probs=192.7
Q ss_pred ccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
....+|+|+||.||+|+.. .+++.||||++..... ...++|.+|+..+.+ ++|||||+++|+|.+++..+|||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~-l~HpNIV~l~g~~~~~~~~~lV~ 108 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR-LQHPNVVCLLGVVTKDQPLSMIF 108 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHh-CCCCCCCCcceEEEECCEEEEEE
Confidence 3456899999999999853 3568899999865432 234568899988888 69999999999999999999999
Q ss_pred EccCCCCHHHHHH-------------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCce
Q 002105 761 EYIEGKELSEVLR-------------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPH 821 (966)
Q Consensus 761 Ey~~~g~L~~~l~-------------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~ 821 (966)
|||++|+|.++|+ .++|.++.+|+.|||+||+||| +.+||||||||+|||+|++. .
T Consensus 109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~--~ 183 (308)
T 4gt4_A 109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL--N 183 (308)
T ss_dssp ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG--C
T ss_pred EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC--C
Confidence 9999999999994 2899999999999999999999 45899999999999999765 4
Q ss_pred EEEeccccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHH
Q 002105 822 LRLSVPGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWAR 892 (966)
Q Consensus 822 ~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 892 (966)
+|++|||++... .....||+.|||||++.++.|+.|+|||||||++|||+| |+.||.+.. ...+.+.+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--~~~~~~~i~ 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--NQDVVEMIR 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--HHHHHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH
Confidence 789999998542 233578999999999999999999999999999999999 899997542 222223322
Q ss_pred HhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 893 YCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 893 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
.+... | .+..++ .++.+++.+||+.||++||||+||+++|++
T Consensus 262 ---~~~~~-----~-~p~~~~------~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 262 ---NRQVL-----P-CPDDCP------AWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp ---TTCCC-----C-CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---cCCCC-----C-Ccccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11111 1 111222 356788899999999999999999999997
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.3e-47 Score=468.37 Aligned_cols=437 Identities=22% Similarity=0.282 Sum_probs=345.1
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEc-cCCCCcccCCcCCCCCC-CCCE-----E---------E-ccCCCCcc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDL-GGNVLVGEIPLSISNIT-SLQI-----F---------T-LASNQLIG 194 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-~~N~l~~~~p~~~~~l~-~L~~-----L---------~-L~~n~l~~ 194 (966)
.+++.|+|++|.+.|.+|+++++|++|++|+| ++|.++|..|....... .+.. + + .....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46888888888888888888888888888888 77777766442211110 0000 0 0 00000000
Q ss_pred c-----------CCcccccCCcceEEEccC--CCCCCCCCcCccCCCCCCEEEeecccccc-----------------cC
Q 002105 195 S-----------IPREIGQLRNLKWIYLGY--NNLSGEIPKEIGDLTSLNHLDLVYNNLTG-----------------QI 244 (966)
Q Consensus 195 ~-----------~p~~l~~l~~L~~L~L~~--N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----------------~~ 244 (966)
. .+........++.+.++. |.+++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0 010111122333344433 67776 77778888888888888888877 48
Q ss_pred CcCCC--CCCccceEeccccccCCCCChhhhcCCCCCEEEccCCc-Ccc-cCchhhcCCC-------CCceecccCCCCC
Q 002105 245 PPSFG--NLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNY-LSG-EIPEEVIQLQ-------NLEILHLFSNNFT 313 (966)
Q Consensus 245 p~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~ 313 (966)
|..++ ++++|++|+|++|.+.+.+|..+.++++|+.|+|++|+ ++| .+|..+..++ +|+.|++++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 88877 89999999999999888999989999999999999998 888 7887776655 8999999999998
Q ss_pred CCCCC--CCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCC-ccEEEccCCCCCCCCCC
Q 002105 314 GKIPS--SLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGS-LFKLILFSNSLEGKIPN 390 (966)
Q Consensus 314 ~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~-L~~L~l~~N~l~~~~p~ 390 (966)
.+|. .++++++|+.|+|++|+++ .+| .++.+++|+.|+|++|.++ .+|..+..+++ |+.|++++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8899999999999999998 778 8888999999999999998 78888888888 999999999988 7888
Q ss_pred ccccCcc--CceeeccccccCCcCChhh---c--CCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCC
Q 002105 391 SLSTCKS--LRRVRLQNNRLSGELSSEF---T--RLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDS 463 (966)
Q Consensus 391 ~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 463 (966)
.+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+|++|+++...+..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 8877654 9999999999998776432 2 3458999999999999544444457899999999999999433335
Q ss_pred cCc--------ccccccccccccccccCCCccc--CcCCCCEEEccCCccCCCChhhccccccccccccCC------cee
Q 002105 464 FGS--------DQLENLDLSENRFSGTIPRSFG--RLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSN------NQL 527 (966)
Q Consensus 464 ~~~--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l 527 (966)
+.. ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l 794 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRI 794 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBC
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccc
Confidence 543 28999999999999 7888887 99999999999999998 899999999999999976 889
Q ss_pred ccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccC
Q 002105 528 SGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSL 579 (966)
Q Consensus 528 ~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~i 579 (966)
.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.||+++|++...-
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred cccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC
Confidence 999999999999999999999999 78998876 69999999999987543
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8e-48 Score=457.20 Aligned_cols=451 Identities=22% Similarity=0.255 Sum_probs=282.6
Q ss_pred CEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccC
Q 002105 88 ESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGG 165 (966)
Q Consensus 88 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 165 (966)
++||+++|+++ .||..++ ++|++|+|++|.+++..| +..+++|++|+|++|++++..|+.|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57888888887 6776554 677777777777776443 46677777777777777766677777777777777777
Q ss_pred CCCcccCCcCCCCCCCCCEEEccCCCCcc-cCCcccccCCcceEEEccCCCCCCCCCcCccCCCCC--CEEEeecccc--
Q 002105 166 NVLVGEIPLSISNITSLQIFTLASNQLIG-SIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSL--NHLDLVYNNL-- 240 (966)
Q Consensus 166 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~Ls~N~l-- 240 (966)
|.++ .+|.. .+++|++|++++|.+++ .+|..++++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 7776 45544 66777777777777665 356667777777777777776654 345555556 6677777666
Q ss_pred cccCCcCCCCCC-ccceEeccccccCCCCCh-hhhcCCCCCEEEccCCc-------CcccCchhhcCCCCCceecccCCC
Q 002105 241 TGQIPPSFGNLS-NLRYLFLYQNKLTGSIPK-SILGLKSLVSFDLSDNY-------LSGEIPEEVIQLQNLEILHLFSNN 311 (966)
Q Consensus 241 ~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~L~~N~ 311 (966)
.+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 556666665554 233445555555544433 34555566666666554 444333 44455555555555544
Q ss_pred CCCCCCCCCCCCCCccEEEccCCcCcccCCcccc---CCCCCcEEEccCCcccccCCCCc-----cCCCCccEEEccCCC
Q 002105 312 FTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLG---KQNNLTVIDLSTNFLTGKIPETL-----CDSGSLFKLILFSNS 383 (966)
Q Consensus 312 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~~~L~~L~Ls~N~l~~~~p~~~-----~~~~~L~~L~l~~N~ 383 (966)
++ +..+..+. ..++|+.|++++|.++|.+|..+ ..+++|+.+++++|.
T Consensus 232 l~------------------------~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 287 (520)
T 2z7x_B 232 TT------------------------WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDV 287 (520)
T ss_dssp EE------------------------HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECC
T ss_pred cC------------------------HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccc
Confidence 43 22111110 12344455555555544444444 444555555555555
Q ss_pred CCCCCC-CccccC---ccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCc-
Q 002105 384 LEGKIP-NSLSTC---KSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSG- 458 (966)
Q Consensus 384 l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~- 458 (966)
+ .+| ..+..+ .+|+.|++++|.+.+... +..+++|++|++++|++++.+|..+..+++|++|+|++|++++
T Consensus 288 ~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 363 (520)
T 2z7x_B 288 F--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363 (520)
T ss_dssp C--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBH
T ss_pred e--ecchhhhhcccccCceeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcc
Confidence 5 233 222222 345566666655543221 1455566666666666666555556666666666666666664
Q ss_pred -cCCC-CcCcccccccccccccccccCCC-cccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccC
Q 002105 459 -KLPD-SFGSDQLENLDLSENRFSGTIPR-SFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASL 535 (966)
Q Consensus 459 -~~p~-~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 535 (966)
.+|. +..+++|++|++++|.+++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+
T Consensus 364 ~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp HHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 2333 33456677777777777664444 477778888888888888877777664 68888888888888 778877
Q ss_pred CCCCCCcEEeCCCCcCcccCCcc-cccCCCCCeeeCcCCcccccCCC
Q 002105 536 SEMPVLGQLDLSENQLSGKIPQT-LGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 536 ~~l~~L~~LdLs~N~l~g~~p~~-l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
..+++|+.|+|++|++++ +|.. +..+++|+.|++++|+++|.++.
T Consensus 441 ~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCCc
Confidence 788889999999999884 5554 88888999999999999887653
No 23
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-47 Score=414.09 Aligned_cols=243 Identities=20% Similarity=0.300 Sum_probs=186.9
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
...+|+||||.||+|+. . ..||||++.... ....++|.+|+..+.+ ++|||||+++|+|.+ +..|||||||+|
T Consensus 41 ~~~iG~G~fG~Vy~~~~-~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~-l~HpNIV~l~g~~~~-~~~~iVmEy~~g 115 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKW-H--GDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp EEECCCCSSSEEEEEES-S--SEEEEEECCCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred eeEEeeCCCcEEEEEEE-C--CcEEEEEEEecCCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEC-CeEEEEEEcCCC
Confidence 44589999999999985 2 358999875332 2234568899988888 699999999999865 568999999999
Q ss_pred CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--------
Q 002105 766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-------- 833 (966)
Q Consensus 766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-------- 833 (966)
|+|.++|+ .++|.++.+|+.|||+||+||| +.+||||||||+|||+|++ ..+|++|||++...
T Consensus 116 GsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEG--LTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp CBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETT--EEEEECCCSSCBC---------
T ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCC--CcEEEeeccCceecccCCccee
Confidence 99999995 3899999999999999999999 4589999999999999965 46799999998642
Q ss_pred CCCCcCCcccccccccCC---CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 834 DSKSINSSAYVAPETKES---KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+||+.|||||++.+ +.|+.|+|||||||++|||+||+.||.+... ...+...+.... ..|.+..
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-~~~~~~~~~~~~--------~~p~~~~ 261 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGY--------ASPDLSK 261 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHTTC--------CCCCSTT
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-HHHHHHHHhcCC--------CCCCccc
Confidence 123579999999999853 4689999999999999999999999975322 222212221111 1121111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
... ....++.+++.+||+.||++||||+||++.||. ++.
T Consensus 262 ~~~---~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~-l~~ 300 (307)
T 3omv_A 262 LYK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIEL-LQH 300 (307)
T ss_dssp SCT---TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH-HHT
T ss_pred ccc---cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH-Hhc
Confidence 111 112356678899999999999999999999987 554
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-46 Score=447.00 Aligned_cols=452 Identities=21% Similarity=0.227 Sum_probs=348.1
Q ss_pred EEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCC
Q 002105 64 NAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSN 141 (966)
Q Consensus 64 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~ 141 (966)
+.+|+++|+++ .+|..+. ++|++|||++|.+. .+++..|..+++|++|+|++|++++..| ++.+++|++|||++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 46899999999 4677666 89999999999998 5776777888999999999999997544 78999999999999
Q ss_pred CCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcc--eEEEccCCCC--
Q 002105 142 NMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNL--KWIYLGYNNL-- 216 (966)
Q Consensus 142 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~N~l-- 216 (966)
|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9998 46666 89999999999999987 578999999999999999999986 457778888 9999999999
Q ss_pred CCCCCcCccCCC-CCCEEEeecccccccCCc-CCCCCCccceEeccccc-------cCCCCChhhhcCCCCCEEEccCCc
Q 002105 217 SGEIPKEIGDLT-SLNHLDLVYNNLTGQIPP-SFGNLSNLRYLFLYQNK-------LTGSIPKSILGLKSLVSFDLSDNY 287 (966)
Q Consensus 217 ~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~n~-------l~~~~p~~l~~l~~L~~L~Ls~N~ 287 (966)
.+..|..+..+. ....+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888898888876 344677888988876654 67889999999999997 666555 78899999999999999
Q ss_pred CcccCchhhc---CCCCCceecccCCCCCCCCCCCC-----CCCCCccEEEccCCcCcccCC-ccccCC---CCCcEEEc
Q 002105 288 LSGEIPEEVI---QLQNLEILHLFSNNFTGKIPSSL-----ASMPKLQVLQLWSNQFSGEIP-SNLGKQ---NNLTVIDL 355 (966)
Q Consensus 288 l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p-~~~~~~---~~L~~L~L 355 (966)
+++..+..+. ..++|+.|++++|.++|.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEc
Confidence 8865443322 24689999999999999999888 8899999999999988 455 344433 57888888
Q ss_pred cCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCC--cCChhhcCCCcccEEcccCCCCC
Q 002105 356 STNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSG--ELSSEFTRLPLVYFLDISGNDLS 433 (966)
Q Consensus 356 s~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~LdLs~N~l~ 433 (966)
++|.+.+.. .+..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+..+++|++||+++|+++
T Consensus 310 ~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~ 387 (520)
T 2z7x_B 310 SGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387 (520)
T ss_dssp ESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCB
T ss_pred CCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCC
Confidence 888876422 11345556666666666665555555555556665555555554 33344555555555555555554
Q ss_pred CccCcchhccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccc
Q 002105 434 GRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSS 513 (966)
Q Consensus 434 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 513 (966)
+.+|.. .+..+++|++|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..
T Consensus 388 ~~l~~~----------------------~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~ 442 (520)
T 2z7x_B 388 YDEKKG----------------------DCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVK 442 (520)
T ss_dssp CCGGGC----------------------SCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGG
T ss_pred cccccc----------------------hhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhc
Confidence 422221 022345666666666666666665554 68888999999888 77887779
Q ss_pred cccccccccCCceeccccCcc-CCCCCCCcEEeCCCCcCcccCC
Q 002105 514 CKKLVSLDLSNNQLSGHIPAS-LSEMPVLGQLDLSENQLSGKIP 556 (966)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~LdLs~N~l~g~~p 556 (966)
+++|+.|+|++|+++ .+|.. +..+++|+.|++++|++++..+
T Consensus 443 l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 443 LEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999999999999998 45654 8889999999999999987654
No 25
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.7e-47 Score=415.93 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=185.7
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchH--HHHHHHHhhcCCCceeEEeeEEecCC----eeEEEEEcc
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFW--PDVSQFGKLIMHPNIVRLHGVCRSEK----AAYLVYEYI 763 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~--~e~~~~~~~~~H~niv~l~g~~~~~~----~~~lv~Ey~ 763 (966)
.+|+||||.||+|+. +|+.||||++.... .+++. .|+..+.+ ++|||||+++|+|.+++ .+|||||||
T Consensus 10 ~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~-l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 10 SIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVM-LRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEECSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTT-CCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhc-CCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 479999999999986 68999999985432 22333 34444445 69999999999998754 579999999
Q ss_pred CCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 764 EGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFH-----CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 764 ~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
+||+|.++|+ .++|..+.+++.|+|+||+|||+. +.++||||||||+|||+|.++ .+|++|||++....
T Consensus 84 ~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSA 161 (303)
T ss_dssp TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTS--CEEECCCTTCEEEETT
T ss_pred CCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCC--CEEEEeCCCCccccCC
Confidence 9999999997 489999999999999999999965 256999999999999999765 47899999986421
Q ss_pred --------CCCcCCcccccccccCCC------CCCCcchHHHHHHHHHHHHcCCCCCCCCCC----------chhhHHHH
Q 002105 835 --------SKSINSSAYVAPETKESK------DITEKGDIYGFGLILIDLLTGKSPADADFG----------VHESIVEW 890 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~----------~~~~~~~~ 890 (966)
...+||+.|||||++.+. .|+.|+|||||||++|||+||++|+..... ......++
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence 124699999999998754 477899999999999999999887643211 01111111
Q ss_pred HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
....... -.+|.++.... ..+....+.+++.+||+.||++||||+||+++|+++.+
T Consensus 242 ~~~~~~~-----~~rp~~p~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 242 RKVVCEQ-----KLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHTTS-----CCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcc-----cCCCCCCcccc-chHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1111111 12333322211 12445677889999999999999999999999998443
No 26
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-46 Score=412.63 Aligned_cols=240 Identities=17% Similarity=0.297 Sum_probs=195.3
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
++.+..+|+|+||.||+|++..+|+.||||++........+.+.+|+..+.+ ++|||||+++++|.+++.+|||||||+
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~-l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD-YQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3456678999999999999999999999999976555556678889888877 799999999999999999999999999
Q ss_pred CCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------CCC
Q 002105 765 GKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------DSK 836 (966)
Q Consensus 765 ~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------~~~ 836 (966)
||+|.++++ .+++.+...++.||+.||+||| +.+||||||||+|||++.++ .+|++|||++... ...
T Consensus 155 gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 155 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSSSCCBCC
T ss_pred CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCC--CEEEecCcCceecCCCCCcccc
Confidence 999999996 4899999999999999999999 55899999999999999664 5899999998653 234
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
.+||+.|||||++.+..|+.++||||+||++|||+||+.||.+... .+ +...+.... .|.+. ......
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~-~~~~i~~~~---------~~~~~-~~~~~s 297 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LK-AMKMIRDNL---------PPRLK-NLHKVS 297 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HH-HHHHHHHSS---------CCCCS-CGGGSC
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HH-HHHHHHcCC---------CCCCC-ccccCC
Confidence 5899999999999999999999999999999999999999975421 11 112221110 11110 001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ ++.+++.+|++.||++|||++|+++
T Consensus 298 ~---~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 298 P---SLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp H---HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred H---HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2 4567788999999999999999875
No 27
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-46 Score=410.13 Aligned_cols=242 Identities=18% Similarity=0.227 Sum_probs=193.8
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|+||.||+|++..+|+.||||++... ..+.+|+..+.+ ++|||||++++++.+++.+|||||||+||
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~-----~~~~~E~~il~~-l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-----VFRVEELVACAG-LSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-----TCCTHHHHTTTT-CCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHH-----HhHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 344579999999999999999999999998542 223467766666 79999999999999999999999999999
Q ss_pred CHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---------
Q 002105 767 ELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--------- 834 (966)
Q Consensus 767 ~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--------- 834 (966)
+|.++++ .+++.+...++.||+.||+||| +.+||||||||+|||++.++ .++|++|||++....
T Consensus 136 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g-~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 136 SLGQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDG-SRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTS-CCEEECCCTTCEEC----------
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCC-CEEEEeeCCCCeEccCCCccccee
Confidence 9999996 4899999999999999999999 56999999999999998654 258999999986421
Q ss_pred --CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 --SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.... +........ .... +.+...+
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~i~~~---~~~~-----~~~~~~~ 282 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASE---PPPI-----REIPPSC 282 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-CCHHHHHHS---CCGG-----GGSCTTS
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHcC---CCCc-----hhcCccC
Confidence 2247999999999999999999999999999999999999999764322 222111110 0000 0111222
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ + ++.+++.+||+.||++|||+.|+++.|+..+..
T Consensus 283 s---~---~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 283 A---P---LTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp C---H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C---H---HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 2 2 456677899999999999999999999875543
No 28
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2e-45 Score=447.60 Aligned_cols=509 Identities=22% Similarity=0.212 Sum_probs=353.8
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeC
Q 002105 62 HVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDL 139 (966)
Q Consensus 62 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~L 139 (966)
.++.|||++|.|++..+.+|.++++|++|||++|+|+ .||+++|..+++|++|+|++|+|++..+ +..+++|++|+|
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 4677777777777666667777777777777777776 5666667777777777777777765322 567777777777
Q ss_pred CCCCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcce----EEEccCC
Q 002105 140 SNNMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLK----WIYLGYN 214 (966)
Q Consensus 140 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~L~~N 214 (966)
++|++++..+..|+++++|++|+|++|.+.+ .+|..++++++|++|++++|++++..|..+..+++++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 7777776666667777777777777777754 3566677777777777777777776666666554433 5667777
Q ss_pred CCCCCCCcCccCCCCCCEEEeeccccccc-CCcCCCCCCccceEeccccc------cCCCCChhhhcCCCCCEEEccCCc
Q 002105 215 NLSGEIPKEIGDLTSLNHLDLVYNNLTGQ-IPPSFGNLSNLRYLFLYQNK------LTGSIPKSILGLKSLVSFDLSDNY 287 (966)
Q Consensus 215 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~n~------l~~~~p~~l~~l~~L~~L~Ls~N~ 287 (966)
.+....+..+ ....++.+++..|..... .+..+..+..++...+..+. +.......+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 7664433333 333456677766654422 22334455555555543322 222233344455555555554333
Q ss_pred Cc---ccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccC
Q 002105 288 LS---GEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKI 364 (966)
Q Consensus 288 l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~ 364 (966)
.. ...+..+..+.+++.+.+.+|.+.... .+.....|+.|++.+|.+.+..+ ..+..|+.++++.|.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCBC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCCc
Confidence 22 123344555667777777777665432 24455677888888887765433 24566777888887765433
Q ss_pred CCCccCCCCccEEEccCCCCCC--CCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccC-cchh
Q 002105 365 PETLCDSGSLFKLILFSNSLEG--KIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIG-EQKW 441 (966)
Q Consensus 365 p~~~~~~~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~-~~~~ 441 (966)
....+++|+.+++++|.+.. ..+..+..+.+|+.+++..|.+... +..+..++.|+.++++.|......+ ..+.
T Consensus 366 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~ 442 (635)
T 4g8a_A 366 --SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 442 (635)
T ss_dssp --CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEE-CSCCTTCTTCCEEECTTSEEESTTSSCTTT
T ss_pred --ccccccccccchhhccccccccccccchhhhhhhhhhhccccccccc-cccccccccccchhhhhccccccccccccc
Confidence 33467788888888887753 3455566777888888888877653 4456778888888888877665544 4466
Q ss_pred ccCCCcEecCCCCcCCccCCCC-cCcccccccccccccc-cccCCCcccCcCCCCEEEccCCccCCCChhhccccccccc
Q 002105 442 EMTSLQMLNLAGNNFSGKLPDS-FGSDQLENLDLSENRF-SGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVS 519 (966)
Q Consensus 442 ~l~~L~~L~Ls~N~l~~~~p~~-~~~~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 519 (966)
.+.+++.++++.|.+.+..|.. ...+.|+.|++++|.+ .+..|..|..+++|++|+|++|++++.+|..|.++++|++
T Consensus 443 ~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~ 522 (635)
T 4g8a_A 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 522 (635)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCE
Confidence 7888888888888888877774 4567888889988874 4457788888999999999999998888888999999999
Q ss_pred cccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccC-CCCCeeeCcCCcccccCC
Q 002105 520 LDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRV-ASLVQVNISHNHFHGSLP 580 (966)
Q Consensus 520 L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l-~~L~~l~ls~N~l~g~ip 580 (966)
|+|++|+|++..|..|+.+++|++|||++|+|++..|..+..+ ++|+.|++++|+|++.+.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999988888888889999999999999998888888887 678999999999887654
No 29
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-46 Score=405.53 Aligned_cols=237 Identities=21% Similarity=0.309 Sum_probs=185.7
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEcc
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEYI 763 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey~ 763 (966)
.+|+||||.||+|++..++..||||++.... ....+.|.+|+..+.+ ++|||||+++|+|.+ ++.+|||||||
T Consensus 33 ~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-LQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 4799999999999998999999999996542 2234568888888888 699999999999865 35689999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----CC
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----SK 836 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----~~ 836 (966)
+||+|.++++ .+++.....++.||+.||+|||+. .++||||||||+|||+++. ...+|++|||++.... ..
T Consensus 112 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~-~g~vKl~DFGla~~~~~~~~~~ 189 (290)
T 3fpq_A 112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKRASFAKA 189 (290)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESST-TSCEEECCTTGGGGCCTTSBEE
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECC-CCCEEEEeCcCCEeCCCCccCC
Confidence 9999999996 489999999999999999999954 3459999999999999842 2458999999986432 23
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
.+||+.|||||++.+ +|+.++|||||||++|||+||+.||..... ...+...+ ... .. .+......+
T Consensus 190 ~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~~~i---~~~-~~----~~~~~~~~~--- 256 (290)
T 3fpq_A 190 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRV---TSG-VK----PASFDKVAI--- 256 (290)
T ss_dssp SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHH---TTT-CC----CGGGGGCCC---
T ss_pred cccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHHHHH---HcC-CC----CCCCCccCC---
Confidence 579999999998865 699999999999999999999999965322 11111111 111 11 111111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+||+.||++|||++|+++
T Consensus 257 ---~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 257 ---PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 24667888999999999999999865
No 30
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.6e-46 Score=409.71 Aligned_cols=238 Identities=21% Similarity=0.337 Sum_probs=186.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
+..+..+|+||||.||+|++..+|+.||||++.... ....+.|.+|+..+.+ ++|||||++++++.+++..||||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN-MKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHH-CCCCCCCcEEEEEEECCEEEEEEeC
Confidence 456677899999999999999999999999986432 2233567888888877 6999999999999999999999999
Q ss_pred cCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 763 IEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
|+||+|.++|+. +++.+...++.||+.||+||| +.+||||||||+|||++.++ .+|++|||++....
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDG--TVQLGDFGIARVLNSTV 179 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTC--CEEECSTTEESCCCHHH
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCC--CEEEcccccceeecCCc
Confidence 999999999952 588889999999999999999 55999999999999999664 58999999986532
Q ss_pred ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCC
Q 002105 835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGH 911 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 911 (966)
...+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ..+.+ . ...... . |.+...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-~~~~~-~---~i~~~~-----~-~~~~~~ 248 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-MKNLV-L---KIISGS-----F-PPVSLH 248 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHH-H---HHHHTC-----C-CCCCTT
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHH-H---HHHcCC-----C-CCCCcc
Confidence 23469999999999999999999999999999999999999997642 11211 1 111111 1 111122
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 912 VSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 912 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
++ + ++.+++.+||+.||++|||++|+++
T Consensus 249 ~s---~---~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 YS---Y---DLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp SC---H---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC---H---HHHHHHHHHccCChhHCcCHHHHhc
Confidence 22 2 4567788999999999999999874
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.6e-46 Score=414.14 Aligned_cols=247 Identities=20% Similarity=0.295 Sum_probs=194.7
Q ss_pred cccccCCCCCccEEEEEEEecCC-----cEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecC-CeeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLAND-----MQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-KAAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~-----~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-~~~~l 758 (966)
.....+|+|+||.||+|+....+ +.||||++..... ...++|.+|+..+.++-+|||||+++|+|.++ +.+||
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i 146 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence 34456799999999999975433 5799999865432 23456889999998854569999999999764 57899
Q ss_pred EEEccCCCCHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC
Q 002105 759 VYEYIEGKELSEVLRN-------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE 819 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~ 819 (966)
|||||++|+|.++|+. ++|.++..++.|||+||+||| +.+||||||||+|||++++.
T Consensus 147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~- 222 (353)
T 4ase_A 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKN- 222 (353)
T ss_dssp EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG-
T ss_pred EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCCCC-
Confidence 9999999999999963 789999999999999999999 55899999999999999764
Q ss_pred ceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002105 820 PHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEW 890 (966)
Q Consensus 820 ~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~ 890 (966)
.+|++|||++.... ....||+.|||||++.+..|+.|+|||||||++|||+| |+.||.+.... +.+...
T Consensus 223 -~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~~~ 300 (353)
T 4ase_A 223 -VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRR 300 (353)
T ss_dssp -CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHH
T ss_pred -CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHHHH
Confidence 57999999986421 23467899999999999999999999999999999998 99999754222 222222
Q ss_pred HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+.. +.. +..+..++ .++.+++.+||+.||++||||+||++.|+++++.
T Consensus 301 i~~---g~~------~~~p~~~~------~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 301 LKE---GTR------MRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHH---TCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHc---CCC------CCCCccCC------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 221 111 11111222 2567788899999999999999999999986653
No 32
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.5e-45 Score=413.06 Aligned_cols=240 Identities=17% Similarity=0.305 Sum_probs=195.6
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
++.+..+|+|+||.||+|++..+|+.||||++........+.+.+|+..+.+ ++|||||+++++|.+++.+|||||||+
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~-l~HpnIV~l~~~~~~~~~~~iVmEy~~ 231 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD-YQHENVVEMYNSYLVGDELWVVMEFLE 231 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHh-CCCCCCCceEEEEEECCEEEEEEeCCC
Confidence 4566778999999999999999999999999976555555668888888877 799999999999999999999999999
Q ss_pred CCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------CC
Q 002105 765 GKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------SK 836 (966)
Q Consensus 765 ~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------~~ 836 (966)
||+|.++++ .+++.+...++.||+.||+||| +.+||||||||+|||++.++ .+|++|||++.... ..
T Consensus 232 gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 232 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTC--CEEECCCTTCEECCSSCCCBCC
T ss_pred CCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCC--CEEEecCccceECCCCCccccc
Confidence 999999996 4899999999999999999999 45899999999999999654 58999999986522 34
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... .+ +...+.. . ..+.+.. .....
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~-~~~~i~~---~------~~~~~~~-~~~~s 374 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LK-AMKMIRD---N------LPPRLKN-LHKVS 374 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HH-HHHHHHH---S------CCCCCSC-TTSSC
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HH-HHHHHHc---C------CCCCCcc-cccCC
Confidence 5799999999999999999999999999999999999999975421 11 1122211 1 0111110 01112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ ++.+++.+|++.||++|||++|+++
T Consensus 375 ~---~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 375 P---SLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp H---HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred H---HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2 4566778999999999999999875
No 33
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.8e-45 Score=395.71 Aligned_cols=236 Identities=18% Similarity=0.247 Sum_probs=191.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
++....+|+|+||.||+|++..+|+.||||++.... ....+.+.+|+..+.+ ++|||||++++++++++..|||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR-LDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEe
Confidence 455567899999999999999999999999986432 2223457788877777 799999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
||+||+|.++++ .+++.+...++.||+.||+||| +.+||||||||+|||++.++ .+|++|||++....
T Consensus 113 y~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g--~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 113 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTS--CEEECCCTTCEECCTTTT
T ss_pred cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCC--CEEEEEcCCceecCCCCC
Confidence 999999999996 4899999999999999999999 55999999999999998654 58999999987521
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
...+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ...+.+.+. .. . +.+..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~---~~-~------~~~p~ 255 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKII---KL-E------YDFPE 255 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HT-C------CCCCT
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH---cC-C------CCCCc
Confidence 23579999999999999999999999999999999999999997642 111212111 11 1 11111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVT 944 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~ 944 (966)
..+ + ++.+++.+|++.||++|||++|+.
T Consensus 256 ~~s---~---~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 KFF---P---KARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp TCC---H---HHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ccC---H---HHHHHHHHHccCCHhHCcChHHHc
Confidence 222 2 456778899999999999999874
No 34
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.5e-44 Score=429.71 Aligned_cols=454 Identities=20% Similarity=0.231 Sum_probs=305.2
Q ss_pred CCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC--CCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEE
Q 002105 85 PHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV--PIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLD 162 (966)
Q Consensus 85 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 162 (966)
...+++|+++|+++ .||..++ ++|++|+|++|.+++.. .+..+++|++|+|++|++++..|+.|..+++|++|+
T Consensus 31 ~~~~~l~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 31 ELESMVDYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp --CCEEECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCcEEEcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 34588999999998 5887654 78888888888888754 367888888888888888887788888888888888
Q ss_pred ccCCCCcccCCcCCCCCCCCCEEEccCCCCcc-cCCcccccCCcceEEEccCCCCCCCCCcCccCCCCC--CEEEeeccc
Q 002105 163 LGGNVLVGEIPLSISNITSLQIFTLASNQLIG-SIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSL--NHLDLVYNN 239 (966)
Q Consensus 163 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~Ls~N~ 239 (966)
|++|.++ .+|.. .+++|++|++++|++++ .+|..|+++++|++|++++|.+++. .+..+++| ++|++++|.
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESS
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccc
Confidence 8888887 56655 78888888888888876 3467888888888888888887753 34555555 888888888
Q ss_pred c--cccCCcCCCCCC--ccceEeccccccCCCCCh-hhhcCCCCCEEEccCCc-----CcccCchhhcCCCCCceecccC
Q 002105 240 L--TGQIPPSFGNLS--NLRYLFLYQNKLTGSIPK-SILGLKSLVSFDLSDNY-----LSGEIPEEVIQLQNLEILHLFS 309 (966)
Q Consensus 240 l--~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~L~~ 309 (966)
+ ++..|..+..+. .+ .++++.|.+.+.++. .+..+++|+.|++++|. +.+ ....+..+++|+.|++.+
T Consensus 181 l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~ 258 (562)
T 3a79_B 181 YHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQH 258 (562)
T ss_dssp CCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEE
T ss_pred ccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecC
Confidence 8 777777776654 23 456777777665554 35567778888887774 221 123455666666666666
Q ss_pred CCCCCCC----CCCCCCCCCccEEEccCCcCcccCCccc-----cCCCCCcEEEccCCcccccCCCCccCCCCccEEEcc
Q 002105 310 NNFTGKI----PSSLASMPKLQVLQLWSNQFSGEIPSNL-----GKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILF 380 (966)
Q Consensus 310 N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~ 380 (966)
+.+.+.. +..+ ..++|++|++++|.++|.+|..+ ..++.|+.++++.|.+ .+|.
T Consensus 259 ~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~-------------- 321 (562)
T 3a79_B 259 IETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSK-------------- 321 (562)
T ss_dssp EEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCH--------------
T ss_pred CcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecCh--------------
Confidence 5544211 1111 12356666666666665555554 4444444444444443 2221
Q ss_pred CCCCCCCCCCcccc---CccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCC
Q 002105 381 SNSLEGKIPNSLST---CKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFS 457 (966)
Q Consensus 381 ~N~l~~~~p~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 457 (966)
..+.. ..+|+.|++++|.+..... ...+++|++|++++|++++.+|..+..+++|++|+|++|+++
T Consensus 322 ---------~~~~~~~~~~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 390 (562)
T 3a79_B 322 ---------EALYSVFAEMNIKMLSISDTPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390 (562)
T ss_dssp ---------HHHHHHHHTCCCSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC
T ss_pred ---------hhhhhhhccCcceEEEccCCCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC
Confidence 11111 1345555555555432211 134555666666666666555555566666666666666666
Q ss_pred ccC--CC-CcCcccccccccccccccccCCC-cccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCc
Q 002105 458 GKL--PD-SFGSDQLENLDLSENRFSGTIPR-SFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPA 533 (966)
Q Consensus 458 ~~~--p~-~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (966)
+.. |. +..+++|++|++++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|.
T Consensus 391 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~ 467 (562)
T 3a79_B 391 NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPK 467 (562)
T ss_dssp BTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCT
T ss_pred CcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccCh
Confidence 422 22 33556677777777777764444 477788888888888888877776654 68889999999888 6777
Q ss_pred cCCCCCCCcEEeCCCCcCcccCCcc-cccCCCCCeeeCcCCcccccCCCC
Q 002105 534 SLSEMPVLGQLDLSENQLSGKIPQT-LGRVASLVQVNISHNHFHGSLPST 582 (966)
Q Consensus 534 ~l~~l~~L~~LdLs~N~l~g~~p~~-l~~l~~L~~l~ls~N~l~g~ip~~ 582 (966)
.+..+++|+.|+|++|++++ +|.. +..+++|+.+++++|++.|.+|..
T Consensus 468 ~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 468 DVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred hhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 77788999999999999984 5554 888899999999999998877643
No 35
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-44 Score=382.82 Aligned_cols=236 Identities=19% Similarity=0.252 Sum_probs=179.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|+||.||+|+...+|+.||||++..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+|||
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-LRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHH-CCCCCCCeEEEEEEECCEEEEEEe
Confidence 4455668999999999999989999999999864322 223457788888877 799999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
|| +|+|.+++. .+++.+...++.||+.||+||| +.+||||||||+|||++++. .+|++|||++...
T Consensus 94 y~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~--~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 94 YA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTC--CEEECCSSCC--------
T ss_pred CC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCC--CEEEeecCCCeecCCCCc
Confidence 99 689999986 4899999999999999999999 45899999999999998654 5899999998642
Q ss_pred CCCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 DSKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+||+.|||||++.+..| +.++||||+||++|||+||+.||.+.. ...+.+.+. .. . +.+....
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~i~---~~-~------~~~p~~~ 235 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNIS---NG-V------YTLPKFL 235 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HT-C------CCCCTTS
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHH---cC-C------CCCCCCC
Confidence 234579999999999998886 579999999999999999999997542 111111111 11 1 1111122
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ + ++.+++.+|++.||++|||++|+++
T Consensus 236 s---~---~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 S---P---GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp C---H---HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C---H---HHHHHHHHHccCChhHCcCHHHHHc
Confidence 2 2 4566788999999999999999876
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-42 Score=422.21 Aligned_cols=516 Identities=22% Similarity=0.178 Sum_probs=417.4
Q ss_pred CCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCc
Q 002105 70 AKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGK 147 (966)
Q Consensus 70 ~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~ 147 (966)
+.+++ .+|+.+. +.+++|||++|+|+ .||+..|..+++|++|||++|+|++..+ +.++++|++|+|++|+|++.
T Consensus 40 ~~~l~-~vP~~lp--~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l 115 (635)
T 4g8a_A 40 ELNFY-KIPDNLP--FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 115 (635)
T ss_dssp TSCCS-SCCSSSC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCcC-ccCCCCC--cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCC
Confidence 34455 3454442 47999999999998 7888888999999999999999997443 78999999999999999988
Q ss_pred CCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcc-cCCcccccCCcceEEEccCCCCCCCCCcCccC
Q 002105 148 IPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIG-SIPREIGQLRNLKWIYLGYNNLSGEIPKEIGD 226 (966)
Q Consensus 148 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 226 (966)
.+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+++ ..|..++.+++|++|++++|.+++..|..+..
T Consensus 116 ~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 195 (635)
T 4g8a_A 116 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 195 (635)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred CHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccc
Confidence 88889999999999999999998877889999999999999999976 46888999999999999999999888888876
Q ss_pred CCCC----CEEEeecccccccCCcCCCCCCccceEeccccccCCC-CChhhhcCCCCCEEEccCCc------CcccCchh
Q 002105 227 LTSL----NHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGS-IPKSILGLKSLVSFDLSDNY------LSGEIPEE 295 (966)
Q Consensus 227 l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~------l~~~~p~~ 295 (966)
+.++ ..++++.|.+....+..+. ...++.+++.+|..... .+..+.++..++...+..+. +.......
T Consensus 196 L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 274 (635)
T 4g8a_A 196 LHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 274 (635)
T ss_dssp HHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTT
T ss_pred hhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccc
Confidence 6554 4788999999876555544 45678899988865432 23457778888777664332 22223344
Q ss_pred hcCCCCCceecccCCCCCC---CCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCC
Q 002105 296 VIQLQNLEILHLFSNNFTG---KIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSG 372 (966)
Q Consensus 296 ~~~l~~L~~L~L~~N~l~~---~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~ 372 (966)
+..+..+....+..+.... ..+..+..+.+++.+.+.+|.+... ..+....+++.|++++|.+.+..+. .+.
T Consensus 275 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~ 349 (635)
T 4g8a_A 275 LEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL---KLK 349 (635)
T ss_dssp TGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---BCT
T ss_pred cccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---cch
Confidence 4455566666555443322 2344566778899999999988654 3456678899999999999865543 456
Q ss_pred CccEEEccCCCCCCCCCCccccCccCceeeccccccCC--cCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEec
Q 002105 373 SLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSG--ELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLN 450 (966)
Q Consensus 373 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~ 450 (966)
.|..+.+..|.+.... ....+++|+.|++++|.+.. ..+..+..+.+|++++++.|.+... +..+..+++|+.++
T Consensus 350 ~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l~~L~~l~ 426 (635)
T 4g8a_A 350 SLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITM-SSNFLGLEQLEHLD 426 (635)
T ss_dssp TCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEE-CSCCTTCTTCCEEE
T ss_pred hhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhccccccccc-cccccccccccchh
Confidence 7889999999876543 35678999999999999864 4567778899999999999988754 45577899999999
Q ss_pred CCCCcCCccCCC--CcCcccccccccccccccccCCCcccCcCCCCEEEccCCcc-CCCChhhccccccccccccCCcee
Q 002105 451 LAGNNFSGKLPD--SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKL-FGDIPEELSSCKKLVSLDLSNNQL 527 (966)
Q Consensus 451 Ls~N~l~~~~p~--~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l 527 (966)
++.|+.....+. +..+.+++.+++++|.+.+..|..+..++.|+.|+|++|++ .+.+|..|..+++|++|+|++|+|
T Consensus 427 l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L 506 (635)
T 4g8a_A 427 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 506 (635)
T ss_dssp CTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred hhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCcc
Confidence 999988776654 44678999999999999999999999999999999999985 446788999999999999999999
Q ss_pred ccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCCCc-c-CCCccccccCCCC
Q 002105 528 SGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPSTGA-F-LAINATAVAGNDL 598 (966)
Q Consensus 528 ~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~-~-~~~~~~~~~gn~l 598 (966)
++.+|..|+++++|+.|+|++|+|++..|..|..+++|+.||+++|++++.+|..-. + ..+......+|.+
T Consensus 507 ~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 507 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred CCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 999999999999999999999999999999999999999999999999998886422 2 3455566778844
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.7e-43 Score=422.04 Aligned_cols=450 Identities=20% Similarity=0.254 Sum_probs=332.1
Q ss_pred EEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCC
Q 002105 64 NAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSN 141 (966)
Q Consensus 64 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~ 141 (966)
+.+|++++++++ +|..+. ++|++|||++|.+. .+|+..|..+++|++|+|++|++++..| ++.+++|++|||++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 678999999996 666654 89999999999998 5777778888999999999999997544 78999999999999
Q ss_pred CCCCCcCCCCcCCCCCcCEEEccCCCCcc-cCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcc--eEEEccCCCC--
Q 002105 142 NMLSGKIPEEIGSFSGLKVLDLGGNVLVG-EIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNL--KWIYLGYNNL-- 216 (966)
Q Consensus 142 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~N~l-- 216 (966)
|+++ .+|.. .+++|++|+|++|.+.+ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9998 56666 89999999999999987 4578999999999999999999863 45555555 9999999999
Q ss_pred CCCCCcCccCCC-CCCEEEeecccccccCCc-CCCCCCccceEeccccc-----cCCCCChhhhcCCCCCEEEccCCcCc
Q 002105 217 SGEIPKEIGDLT-SLNHLDLVYNNLTGQIPP-SFGNLSNLRYLFLYQNK-----LTGSIPKSILGLKSLVSFDLSDNYLS 289 (966)
Q Consensus 217 ~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~n~-----l~~~~p~~l~~l~~L~~L~Ls~N~l~ 289 (966)
++..|..+..+. ..-.++++.|.+.+.++. .+.++++|+.|++++|+ +.+ ....+..+++|+.|+++++.++
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCc
Confidence 888888888765 122568889988876654 46789999999999985 222 2345778899999999988876
Q ss_pred ccCchh---hcCCCCCceecccCCCCCCCCCCCC-----CCCCCccEEEccCCcCcccCCc-ccc---CCCCCcEEEccC
Q 002105 290 GEIPEE---VIQLQNLEILHLFSNNFTGKIPSSL-----ASMPKLQVLQLWSNQFSGEIPS-NLG---KQNNLTVIDLST 357 (966)
Q Consensus 290 ~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p~-~~~---~~~~L~~L~Ls~ 357 (966)
+..... .....+|++|++++|.++|.+|..+ ..++.|+.+++..|.+ .+|. .+. ...+|+.|++++
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccC
Confidence 532211 1234599999999999999999887 7888888888888877 4552 222 235788999998
Q ss_pred CcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCc--CChhhcCCCcccEEcccCCCCCCc
Q 002105 358 NFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGE--LSSEFTRLPLVYFLDISGNDLSGR 435 (966)
Q Consensus 358 N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~LdLs~N~l~~~ 435 (966)
|.+..... ...+++|+.|++++|++++.+|..+..+++|++|++++|++++. +|..|..+++
T Consensus 341 n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~-------------- 404 (562)
T 3a79_B 341 TPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSS-------------- 404 (562)
T ss_dssp SCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTT--------------
T ss_pred CCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCC--------------
Confidence 88753211 13455566666666666555555555555555555555555542 2233444444
Q ss_pred cCcchhccCCCcEecCCCCcCCccCCC--CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccc
Q 002105 436 IGEQKWEMTSLQMLNLAGNNFSGKLPD--SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSS 513 (966)
Q Consensus 436 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 513 (966)
|++|++++|++++.+|. +..+++|++|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..
T Consensus 405 ----------L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~ 471 (562)
T 3a79_B 405 ----------LETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTH 471 (562)
T ss_dssp ----------CCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTS
T ss_pred ----------CCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcC
Confidence 45555555555443332 22345666666666666665555544 57888888888887 56766668
Q ss_pred cccccccccCCceeccccCcc-CCCCCCCcEEeCCCCcCcccCC
Q 002105 514 CKKLVSLDLSNNQLSGHIPAS-LSEMPVLGQLDLSENQLSGKIP 556 (966)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~LdLs~N~l~g~~p 556 (966)
+++|++|+|++|+++ .+|.. +..+++|+.|++++|++++..|
T Consensus 472 l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 472 LQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 888888888888888 45554 8888888999999998887655
No 38
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.8e-44 Score=389.17 Aligned_cols=232 Identities=22% Similarity=0.317 Sum_probs=180.5
Q ss_pred ccccccCCCCCccEEEEEEEe---cCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSL---ANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~---~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
++.+..+|+|+||.||+|+.. .+++.||||++.... ......+.+|+..+.+ ++|||||++++++.+++..|||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-VNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCC-CCCTTEECEEEEEEETTEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHH-CCCCCCCeEEEEEEECCEEEEE
Confidence 456667899999999999874 356789999986432 2233457778777766 7999999999999999999999
Q ss_pred EEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---
Q 002105 760 YEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--- 833 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--- 833 (966)
||||+||+|.++++ .+++.+...++.||+.||+||| +.+||||||||+|||++.++ .+|++|||++...
T Consensus 105 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDH 179 (304)
T ss_dssp ECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTS--CEEEESSEEEEC----
T ss_pred EEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCC--CEEecccccceeccCC
Confidence 99999999999996 3899999999999999999999 55899999999999999654 5899999998642
Q ss_pred ---CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 834 ---DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 834 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ..+.. ..+. .. . +.+..
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-~~~~~-~~i~---~~-~------~~~p~ 247 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-RKETM-TMIL---KA-K------LGMPQ 247 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHH-HHHH---HC-C------CCCCT
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-HHHHH-HHHH---cC-C------CCCCC
Confidence 234579999999999999999999999999999999999999997642 11111 1111 11 1 11111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCA 940 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 940 (966)
..+ + ++.+++.+|++.||++|||+
T Consensus 248 ~~s---~---~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 248 FLS---P---EAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp TSC---H---HHHHHHHHHTCSSGGGSTTC
T ss_pred cCC---H---HHHHHHHHHcccCHHHCCCC
Confidence 222 2 45677889999999999995
No 39
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.4e-44 Score=386.95 Aligned_cols=236 Identities=20% Similarity=0.362 Sum_probs=178.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCC---------
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK--------- 754 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~--------- 754 (966)
++.+..+|+||||.||+|+...+|+.||||++..... ...+.+.+|+..+.+ ++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~-l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK-LEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEEEC---------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEecCccccccccC
Confidence 3455678999999999999989999999999864432 234567888888887 69999999999987544
Q ss_pred ---eeEEEEEccCCCCHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEe
Q 002105 755 ---AAYLVYEYIEGKELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLS 825 (966)
Q Consensus 755 ---~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~ 825 (966)
..|+|||||++|+|.++++. .++.....++.||++||+||| +.+||||||||+|||++.++ .+|++
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~--~vKl~ 160 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDD--VVKVG 160 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTC--CEEEC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCC--cEEEc
Confidence 37999999999999999963 567778899999999999999 45899999999999999765 57999
Q ss_pred ccccceecC------------------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhH
Q 002105 826 VPGLAYCTD------------------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESI 887 (966)
Q Consensus 826 ~~~~~~~~~------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~ 887 (966)
|||++.... ...+||+.|||||++.+..|+.++|||||||++|||++ ||... .+..
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~---~~~~ 234 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ---MERV 234 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH---HHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc---cHHH
Confidence 999986421 12469999999999999999999999999999999997 76532 1111
Q ss_pred HHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 888 VEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 888 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..... ..... ..|. ..+...+..+++.+|++.||++|||+.|+++
T Consensus 235 -~~~~~-~~~~~----~p~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 -RTLTD-VRNLK----FPPL-------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHH-HHTTC----CCHH-------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHH-HhcCC----CCCC-------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 01111 1111 1122234556888999999999999999876
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8e-42 Score=377.17 Aligned_cols=290 Identities=31% Similarity=0.532 Sum_probs=208.0
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCc--ccceeeCCC---CCEEEEEcCCCCccc--cccccccCCCCCCE
Q 002105 17 TCHGAELELLLSFKSTVNDPYNFLSNWDSSVTFCK--WNGISCQNS---THVNAIELSAKNISG--KISSSIFHLPHVES 89 (966)
Q Consensus 17 ~~~~~~~~~Ll~~k~~~~~~~~~l~~w~~~~~~c~--w~gv~c~~~---~~v~~L~L~~~~l~~--~~~~~~~~l~~L~~ 89 (966)
.|+++|++||++||+++.+|. .+++|..+.+||. |.||+|+.. .+|+.|+|++++++| .+|+++.++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 599999999999999998886 7899987779998 999999865 599999999999999 89999999999999
Q ss_pred EEcCC-CCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCC
Q 002105 90 INLSS-NQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGN 166 (966)
Q Consensus 90 L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 166 (966)
|+|++ |.+.+.+|..+ ..+++|++|+|++|.+++..| ++.+++|++|+|++|.+++.+|..+..+++|++|+|++|
T Consensus 81 L~L~~~n~l~~~~p~~l-~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAI-AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEETTEESCCCGGG-GGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeCCCCCcccccCChhH-hcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 99995 99998888765 445777777777777765444 466666777777777666666666666666666666666
Q ss_pred CCcccCCcCCCCCC-CCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCC
Q 002105 167 VLVGEIPLSISNIT-SLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIP 245 (966)
Q Consensus 167 ~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 245 (966)
.+++.+|..+++++ +|++|++++|++++.+|..++.++ |++|++++|.+++..|..|..+++|++|++++|.+++.+|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 66666666666665 666666666666666666666665 6666666666666566666666666666666666655444
Q ss_pred cCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCC
Q 002105 246 PSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNN 311 (966)
Q Consensus 246 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 311 (966)
. +..+++|++|++++|++++.+|..+..+++|++|++++|.++|.+|.. ..+++|+.|++++|.
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 3 555566666666666666556666666666666666666666555544 455555555555554
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.5e-41 Score=389.75 Aligned_cols=266 Identities=23% Similarity=0.258 Sum_probs=115.0
Q ss_pred CCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCc-------------CEEEccCCCCcccCCc
Q 002105 110 NSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGL-------------KVLDLGGNVLVGEIPL 174 (966)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p~ 174 (966)
++|++|++++|.+ +.+| ++++++|++|++++|.+.|.+|..++++.+| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5666666666666 4444 4666666666666666666666666666554 555555555443 222
Q ss_pred CCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCcc
Q 002105 175 SISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNL 254 (966)
Q Consensus 175 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 254 (966)
. .++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .|+++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 1 2445555555555554 3332 2445555555555543 2211 1345555555555553 34 35555555
Q ss_pred ceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCC
Q 002105 255 RYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSN 334 (966)
Q Consensus 255 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 334 (966)
++|++++|++++ +|..+ .+|++|++++|.+++ +| .+..+++|+.|++++|.+++ +|... ++|++|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 555555555543 33221 345555555555543 23 34455555555555555543 22211 34555555555
Q ss_pred cCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCC
Q 002105 335 QFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSG 410 (966)
Q Consensus 335 ~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 410 (966)
.++ .+| .++.+++|+.|++++|.+++ +|.. ..+|+.|++++|++++ +|.. +++|++|++++|++++
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 544 333 24445555555555555443 2221 1344444444444443 2221 1344444444444443
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-40 Score=386.67 Aligned_cols=363 Identities=20% Similarity=0.209 Sum_probs=244.1
Q ss_pred CCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC---CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEE
Q 002105 85 PHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP---IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVL 161 (966)
Q Consensus 85 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 161 (966)
++|++|||++|.+++ +++..+..+++|++|+|++|.+.+.++ +..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCE-ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CccCEEEecCCccCc-CChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 678999999999884 544556667888888888888875432 5778888888888888888788888888888888
Q ss_pred EccCCCCcccCCcC--CCCCCCCCEEEccCCCCcccCCcc-cccCCcceEEEccCCCCCCCCCcCccCC--CCCCEEEee
Q 002105 162 DLGGNVLVGEIPLS--ISNITSLQIFTLASNQLIGSIPRE-IGQLRNLKWIYLGYNNLSGEIPKEIGDL--TSLNHLDLV 236 (966)
Q Consensus 162 ~L~~N~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~Ls 236 (966)
+|++|.+.+.+|.. |.++++|++|++++|++++..|.. +.++++|++|++++|.+++..|..+..+ .+|+.|+++
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 88888887755544 788888888888888888776765 7788888888888888887777777665 577788888
Q ss_pred cccccccCCcCC--------CCCCccceEeccccccCCCCChhhhcC---CCCCEEEccCCcCcccCchhhcCCCCCcee
Q 002105 237 YNNLTGQIPPSF--------GNLSNLRYLFLYQNKLTGSIPKSILGL---KSLVSFDLSDNYLSGEIPEEVIQLQNLEIL 305 (966)
Q Consensus 237 ~N~l~~~~p~~~--------~~l~~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 305 (966)
+|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+...
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------ 256 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------ 256 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT------------
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc------------
Confidence 887775444332 245667777777777666666555443 566666666665443211
Q ss_pred cccCCCCCCCCCCCCCC--CCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCC
Q 002105 306 HLFSNNFTGKIPSSLAS--MPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNS 383 (966)
Q Consensus 306 ~L~~N~l~~~~p~~l~~--l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~ 383 (966)
..+.+.+..+..+.. .++|+.|++++|.+.+..|..+..+++|+.|+|++|.+++..|..|..+++|+.|++++|.
T Consensus 257 --~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 334 (455)
T 3v47_A 257 --GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNF 334 (455)
T ss_dssp --TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred --chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCc
Confidence 111122112222222 2466666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCC
Q 002105 384 LEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPD 462 (966)
Q Consensus 384 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 462 (966)
+++..|..+..+++|++|+|++|++++..|..|..+++|++|++++|++++..+..+..+++|++|++++|++++..|.
T Consensus 335 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 335 LGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 6655566666666666666666666666666666666666666666666655555555566666666666666655553
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.8e-40 Score=384.70 Aligned_cols=418 Identities=22% Similarity=0.265 Sum_probs=250.4
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCC
Q 002105 62 HVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSN 141 (966)
Q Consensus 62 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~ 141 (966)
+++.|++++|++ |.+|++++++++|++|++++|.+.|.+|..+.. +++|+++++++|.. .+|++|++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~-l~~L~~l~l~~c~~---------~~l~~L~l~~ 80 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGE-QREMAVSRLRDCLD---------RQAHELELNN 80 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCC-CHHHHHHHHHHHHH---------HTCSEEECTT
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCccccc-chhcchhhhhhhhc---------cCCCEEEecC
Confidence 455566666666 566666666666666666666666556554322 24444444443321 3579999999
Q ss_pred CCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCC
Q 002105 142 NMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIP 221 (966)
Q Consensus 142 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 221 (966)
|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|.+++ +|
T Consensus 81 ~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp 147 (454)
T 1jl5_A 81 LGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP 147 (454)
T ss_dssp SCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC
T ss_pred Ccccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc
Confidence 99986 4542 4789999999999987 6653 4889999999999986 3322 2689999999999986 77
Q ss_pred cCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCC
Q 002105 222 KEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQN 301 (966)
Q Consensus 222 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 301 (966)
+++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|++|++++|.+++ +|.. .++
T Consensus 148 -~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~ 216 (454)
T 1jl5_A 148 -ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLS 216 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTT
T ss_pred -ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCc
Confidence 69999999999999999986 66654 589999999999987 56 68999999999999999986 4433 258
Q ss_pred CceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccC
Q 002105 302 LEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFS 381 (966)
Q Consensus 302 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~ 381 (966)
|+.|++++|.++ .+|. ++.+++|++|++++|++++ +|.. .++|+.|++++|.+++ +|.. .++|+.|++++
T Consensus 217 L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~ 286 (454)
T 1jl5_A 217 LESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSE 286 (454)
T ss_dssp CCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred ccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcC
Confidence 999999999998 5774 8999999999999999986 5543 4789999999999997 5554 37899999999
Q ss_pred CCCCCCCCCccccCccCceeeccccccCCcCChhhcCC-CcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccC
Q 002105 382 NSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRL-PLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKL 460 (966)
Q Consensus 382 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 460 (966)
|++++. |.. .++|+.|++++|++++.. .+ ++|++|++++|++++ +|.. ++
T Consensus 287 N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~---------------- 337 (454)
T 1jl5_A 287 NIFSGL-SEL---PPNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PP---------------- 337 (454)
T ss_dssp SCCSEE-SCC---CTTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CT----------------
T ss_pred CccCcc-cCc---CCcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CC----------------
Confidence 999872 211 157788888888776521 22 355555555555554 2221 23
Q ss_pred CCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCC--CChhhccccccccccccCCceeccccCccCCCC
Q 002105 461 PDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFG--DIPEELSSCKKLVSLDLSNNQLSGHIPASLSEM 538 (966)
Q Consensus 461 p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 538 (966)
+|++|++++|++++ +|. .+++|+.|++++|++++ .+|..+..+ +.|.+.|.+|.. +
T Consensus 338 -------~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~ 395 (454)
T 1jl5_A 338 -------RLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---P 395 (454)
T ss_dssp -------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC------------
T ss_pred -------cCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---c
Confidence 45555555555542 333 24566666666666665 455544332 335566666653 3
Q ss_pred CCCcEEeCCCCcCcc--cCCcccccCCCCCeeeCcCCcccccCCC
Q 002105 539 PVLGQLDLSENQLSG--KIPQTLGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 539 ~~L~~LdLs~N~l~g--~~p~~l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
++|+.||+++|++++ .+|.+ ++.|.+.+|.+.+.+|.
T Consensus 396 ~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 396 QNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ---------------------------------------------
T ss_pred CcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 567777777777776 56644 34455677777766553
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-40 Score=385.73 Aligned_cols=383 Identities=22% Similarity=0.211 Sum_probs=274.7
Q ss_pred CEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccC-CcCCCCCCccceEeccc
Q 002105 183 QIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQI-PPSFGNLSNLRYLFLYQ 261 (966)
Q Consensus 183 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~ 261 (966)
+.++.+++.++ .+|. + .++|++|+|++|.+++..|..|+++++|++|++++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34566666655 3444 2 256777777777777666777777777777777777766444 45567777777777777
Q ss_pred cccCCCCChhhhcCCCCCEEEccCCcCcccCchh--hcCCCCCceecccCCCCCCCCCCC-CCCCCCccEEEccCCcCcc
Q 002105 262 NKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEE--VIQLQNLEILHLFSNNFTGKIPSS-LASMPKLQVLQLWSNQFSG 338 (966)
Q Consensus 262 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~ 338 (966)
|++++..|..|.++++|++|++++|.+++..|.. +..+++|++|++++|.+++..|.. +.++++|++|++++|.+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 7777666677777777777777777776644443 666666666666666666655554 5666666666666666666
Q ss_pred cCCccccCC--CCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhh
Q 002105 339 EIPSNLGKQ--NNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEF 416 (966)
Q Consensus 339 ~~p~~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 416 (966)
..|..+..+ .+|+.|++++|.+.+..+..+.. .....+..+++|++|++++|++++..|..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 655555544 45666666666655433322110 000012234556666666666665555544
Q ss_pred cCC---CcccEEcccCCCCCC----------ccCcchhc--cCCCcEecCCCCcCCccCCCC-cCccccccccccccccc
Q 002105 417 TRL---PLVYFLDISGNDLSG----------RIGEQKWE--MTSLQMLNLAGNNFSGKLPDS-FGSDQLENLDLSENRFS 480 (966)
Q Consensus 417 ~~l---~~L~~LdLs~N~l~~----------~~~~~~~~--l~~L~~L~Ls~N~l~~~~p~~-~~~~~L~~L~Ls~N~l~ 480 (966)
..+ ++++.|++++|.+.+ ..+..+.. .++|+.|++++|.+++..|.. ..+++|++|++++|+++
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 312 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN 312 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred hccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccc
Confidence 332 566666666654433 22222222 368999999999999988884 46789999999999999
Q ss_pred ccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccc
Q 002105 481 GTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLG 560 (966)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~ 560 (966)
+..|..|..+++|+.|+|++|++.+..|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+.
T Consensus 313 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 392 (455)
T 3v47_A 313 KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFD 392 (455)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888889
Q ss_pred cCCCCCeeeCcCCcccccCCCCCcc
Q 002105 561 RVASLVQVNISHNHFHGSLPSTGAF 585 (966)
Q Consensus 561 ~l~~L~~l~ls~N~l~g~ip~~~~~ 585 (966)
.+++|+.|++++|+++|.+|....+
T Consensus 393 ~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 393 RLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp TCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred cCCcccEEEccCCCcccCCCcchHH
Confidence 9999999999999999999965443
No 45
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.4e-40 Score=370.02 Aligned_cols=191 Identities=20% Similarity=0.288 Sum_probs=162.5
Q ss_pred ccccccCCCCCccEEEEEEEe---cCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSL---ANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~---~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|+||.||+|+.. .+++.||+|++.... ....+.+|+..+.++.+|||||++++++.+++..|+|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 344556899999999999874 356789999986543 234567888888775579999999999999999999999
Q ss_pred ccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105 762 YIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------- 834 (966)
Q Consensus 762 y~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------- 834 (966)
||+||+|.++++.+++.+...++.|++.||+||| +.+||||||||+|||++.+ ...+|++|||++....
T Consensus 101 ~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~-~~~~kl~DFGla~~~~~~~~~~~ 176 (361)
T 4f9c_A 101 YLEHESFLDILNSLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRR-LKKYALVDFGLAQGTHDTKIELL 176 (361)
T ss_dssp CCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECTTCSCGGG
T ss_pred CCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCC-CCeEEECcCCCCcccCCcccccc
Confidence 9999999999999999999999999999999999 5599999999999999864 2478999999985321
Q ss_pred ---------------------------CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCC
Q 002105 835 ---------------------------SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADF 881 (966)
Q Consensus 835 ---------------------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~ 881 (966)
...+||+.|||||++.+. .|+.++||||+||++|||+||+.||....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp GGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 123699999999998775 58999999999999999999999996543
No 46
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.7e-39 Score=375.11 Aligned_cols=363 Identities=20% Similarity=0.215 Sum_probs=227.2
Q ss_pred ccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCC
Q 002105 75 GKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGS 154 (966)
Q Consensus 75 ~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 154 (966)
+..+.++.++++|++|||++|.+++ +| . +..+++|++|+|++|++++. |++.+++|++|+|++|.+++. | ++.
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~-l~~l~~L~~L~Ls~n~l~~~-~~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITD-MT-G-IEKLTGLTKLICTSNNITTL-DLSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCC-CT-T-GGGCTTCSEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred cccccChhHcCCCCEEEccCCCccc-Ch-h-hcccCCCCEEEccCCcCCeE-ccccCCCCCEEECcCCCCcee-e--cCC
Confidence 3444567778888899999888884 55 2 55668888888888888863 678888888888888888864 3 778
Q ss_pred CCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEE
Q 002105 155 FSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLD 234 (966)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 234 (966)
+++|++|++++|.+++ +| ++++++|++|++++|++++. .++.+++|++|++++|...+.+ .++.+++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 8888888888888876 33 77888888888888888763 2677778888888887655554 467777777777
Q ss_pred eecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCC
Q 002105 235 LVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTG 314 (966)
Q Consensus 235 Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 314 (966)
+++|++++ +| ++.+++|++|++++|++++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 77777775 34 66777777777777777654 26666777777777777765 34 5566666666666666665
Q ss_pred CCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCcccc
Q 002105 315 KIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLST 394 (966)
Q Consensus 315 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~ 394 (966)
.. ++.+++|+.|+++.| +|+.|++++|.+.+.+| + ..
T Consensus 248 ~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~------------------------~~ 284 (457)
T 3bz5_A 248 LD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--A------------------------EG 284 (457)
T ss_dssp CC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--C------------------------TT
T ss_pred cC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--c------------------------cc
Confidence 43 334555666655543 23445555555544443 2 23
Q ss_pred CccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCccccccccc
Q 002105 395 CKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDL 474 (966)
Q Consensus 395 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L 474 (966)
+++|+.|++++|.+.+.+|. ..+.|+.|++++| ++|+.|++++|++++. + +..+++|+.|++
T Consensus 285 l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~-l~~l~~L~~L~l 346 (457)
T 3bz5_A 285 CRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D-VSHNTKLKSLSC 346 (457)
T ss_dssp CTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C-CTTCTTCSEEEC
T ss_pred cccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c-cccCCcCcEEEC
Confidence 44444444444444444332 2233333333333 2444455555555442 1 334444555555
Q ss_pred ccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccC
Q 002105 475 SENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASL 535 (966)
Q Consensus 475 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 535 (966)
++|++++ ++.|..|++++|+++|. ..+..|..+++++|+++|.+|..+
T Consensus 347 ~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 347 VNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp CSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred CCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 5555543 12333444555555543 244556666666666666666544
No 47
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=369.14 Aligned_cols=252 Identities=18% Similarity=0.232 Sum_probs=186.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEec------CCee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------EKAA 756 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------~~~~ 756 (966)
++.+..+|+|+||.||+|++..+|+.||||++..... ...+.+.+|+..+.+ ++|||||++++++.. .+.+
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKH-FKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHH-CCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHh-cCCCCcceEeeeeecccccccCCEE
Confidence 4455678999999999999999999999999864322 223457788888877 799999999998764 3678
Q ss_pred EEEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105 757 YLVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~ 833 (966)
|||||||+ |+|.+++. .+++.....++.||+.||+||| +.+||||||||+|||++.++ .+|++|||++...
T Consensus 135 ~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~--~~Ki~DFGla~~~ 208 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENC--ELKIGDFGMARGL 208 (398)
T ss_dssp EEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTC--CEEECCCTTCBCC
T ss_pred EEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCC--CEEEeecceeeec
Confidence 99999996 78999996 4899999999999999999999 55999999999999999654 5799999998532
Q ss_pred ----------CCCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccc
Q 002105 834 ----------DSKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDT 902 (966)
Q Consensus 834 ----------~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (966)
....+||+.|||||++.+. .|+.++||||+||++|||+||+.||.+... .+.+...... ........
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~-~g~p~~~~ 286 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMV-LGTPSPAV 286 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHH-HCCCCGGG
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHh-cCCCChHH
Confidence 1245899999999998775 569999999999999999999999976422 1211111111 10000000
Q ss_pred c--cc--------ccccCCCcchHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 903 W--VD--------PFIRGHVSSIQN-----EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 903 ~--~d--------~~~~~~~~~~~~-----~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ +. ..+....+...+ .-.++.+++.+|++.||++|||++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 00 000000000000 0135667889999999999999999875
No 48
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6e-40 Score=389.12 Aligned_cols=243 Identities=20% Similarity=0.325 Sum_probs=195.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
++....+|+|+||.||+|+...+|+.||+|++........+.+.+|+..+.+ ++|||||++++++.+++.+|||||||+
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSV-LRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHH-TCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 3445567999999999999999999999999876554445567788888777 799999999999999999999999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS----- 835 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~----- 835 (966)
||+|.+++. .+++.+...++.||+.||+||| +.+|+||||||+|||++.+....+|++|||++.....
T Consensus 238 gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 999999994 3789999999999999999999 5599999999999999977667899999999876432
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
..+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... .+.. ..+... ... +++......+
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-~~~~-~~i~~~--~~~----~~~~~~~~~s-- 384 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-DETL-RNVKSC--DWN----MDDSAFSGIS-- 384 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHH-HHHHTT--CCC----CCSGGGTTSC--
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHH-HHHHhC--CCC----CCcccccCCC--
Confidence 23799999999999999999999999999999999999999976421 1111 211110 000 1111111222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ ++.+++.+|++.||++|||+.|+++
T Consensus 385 -~---~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 385 -E---DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp -H---HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -H---HHHHHHHHHccCChhHCcCHHHHhc
Confidence 2 4567788999999999999999875
No 49
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-38 Score=369.22 Aligned_cols=354 Identities=21% Similarity=0.195 Sum_probs=182.1
Q ss_pred CCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceE
Q 002105 129 GSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKW 208 (966)
Q Consensus 129 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 208 (966)
+.+++|++||+++|.+++. | .++.+++|++|+|++|.+++. | ++.+++|++|++++|.+++. | ++++++|++
T Consensus 39 ~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp HHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred hHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 3344455555555555432 3 345555555555555555442 2 45555555555555555442 2 455555555
Q ss_pred EEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcC
Q 002105 209 IYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYL 288 (966)
Q Consensus 209 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 288 (966)
|++++|.+++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|++|++++|.+
T Consensus 111 L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 111 LNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp EECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcc
Confidence 5555555554 22 55555555555555555542 2 555556666666665443333 245556666666666666
Q ss_pred cccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCc
Q 002105 289 SGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETL 368 (966)
Q Consensus 289 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 368 (966)
++ +| +..+++|+.|++++|.+++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++|.+++.. +
T Consensus 183 ~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~ 250 (457)
T 3bz5_A 183 TE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---V 250 (457)
T ss_dssp CC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---C
T ss_pred ce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---H
Confidence 54 23 45556666666666666543 25566666666666666665 34 556666666666666666532 2
Q ss_pred cCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcE
Q 002105 369 CDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQM 448 (966)
Q Consensus 369 ~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~ 448 (966)
..+++|+.|++++| +|+.|++++|.+.+.+| +..+++|+.|++++|.+.+.+|. ...+|+.
T Consensus 251 ~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~ 311 (457)
T 3bz5_A 251 STLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITE 311 (457)
T ss_dssp TTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSC
T ss_pred HHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceE
Confidence 23344555555443 24455566666555554 34555666666666655555442 2334444
Q ss_pred ecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceec
Q 002105 449 LNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLS 528 (966)
Q Consensus 449 L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (966)
|++++| ++|++|++++|++++. + ++.+++|+.|++++|++++ ++.|..|++++|.++
T Consensus 312 L~l~~~------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~ 368 (457)
T 3bz5_A 312 LDLSQN------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFE 368 (457)
T ss_dssp CCCTTC------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEE
T ss_pred echhhc------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEE
Confidence 444433 2445555555555542 1 4455555555555555543 133444445555554
Q ss_pred cccCccCCCCCCCcEEeCCCCcCcccCCc
Q 002105 529 GHIPASLSEMPVLGQLDLSENQLSGKIPQ 557 (966)
Q Consensus 529 ~~~p~~l~~l~~L~~LdLs~N~l~g~~p~ 557 (966)
|. +.+..|..+++++|+++|.+|.
T Consensus 369 g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 369 AE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp EE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred ec-----ceeeecCccccccCcEEEEcCh
Confidence 43 1222334444444444444443
No 50
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.8e-39 Score=380.98 Aligned_cols=239 Identities=21% Similarity=0.226 Sum_probs=183.7
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccc-hHHHH--HHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSS-FWPDV--SQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~-~~~e~--~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
++.+..+|+|+||.||+|+...+|..||+|++..... ..... ...|. ..+.+.++|||||++++++.+++.+|||
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 3555678999999999999999999999999864321 11112 22332 2233336899999999999999999999
Q ss_pred EEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---
Q 002105 760 YEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--- 833 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--- 833 (966)
||||+||+|.++|+ .+++.....++.||+.||+||| +.+||||||||+|||+|.+ .++|++|||++...
T Consensus 271 mEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~--G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSKK 345 (689)
T ss_dssp ECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSSC
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCC--CCEEecccceeeecCCC
Confidence 99999999999996 3899999999999999999999 6699999999999999965 46899999998653
Q ss_pred -CCCCcCCcccccccccC-CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-hhhHHHHHHHhhccCcccccccccccC
Q 002105 834 -DSKSINSSAYVAPETKE-SKDITEKGDIYGFGLILIDLLTGKSPADADFGV-HESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 834 -~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+||+.|||||++. +..|+.++||||+||++|||+||+.||.+.... ...+.... ... .+.+..
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i---~~~-------~~~~p~ 415 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---LTM-------AVELPD 415 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH---HHC-------CCCCCT
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh---cCC-------CCCCCc
Confidence 23468999999999986 457999999999999999999999999754221 11111111 110 111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPC-----ASDVT 944 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~~v~ 944 (966)
..+ + ++.+++.+|++.||++|++ ++||.
T Consensus 416 ~~S---~---~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 416 SFS---P---ELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp TSC---H---HHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred cCC---H---HHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 222 2 4567788999999999998 56664
No 51
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.2e-39 Score=356.57 Aligned_cols=260 Identities=23% Similarity=0.418 Sum_probs=210.5
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+. .++..||||++........+.+.+|+..+.+ ++|||||+++++|.+++..++||||+++
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSF-CRHPHLVSLIGFCDERNEMILIYKYMEN 119 (321)
T ss_dssp SCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGS-CCCTTBCCEEEECCCTTCCEEEEECCTT
T ss_pred CccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHh-CCCCCEeeEEEEEcCCCeEEEEEEcCCC
Confidence 4455679999999999996 6789999998766544445567888877777 6999999999999999999999999999
Q ss_pred CCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 766 KELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 766 g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
|+|.+++. .++|..+..++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 120 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~ 194 (321)
T 2qkw_B 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENF--VPKITDFGISKKGTELDQ 194 (321)
T ss_dssp CBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTC--CEEECCCTTCEECSSSSC
T ss_pred CcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCC--CEEEeecccccccccccc
Confidence 99999985 38899999999999999999994 5999999999999998654 57899999876421
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-hhhHHHHHHHhhccCccccccccccc
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV-HESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+|.............+++...
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (321)
T 2qkw_B 195 THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA 274 (321)
T ss_dssp CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT
T ss_pred cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhc
Confidence 1234788999999998889999999999999999999999999754332 22233565544444444455666554
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
.... .+...++.+++.+||+.||++|||++||++.|+..++..
T Consensus 275 ~~~~--~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 275 DKIR--PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp TCSC--HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cccC--HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 4333 456677889999999999999999999999999966543
No 52
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.1e-39 Score=355.83 Aligned_cols=272 Identities=28% Similarity=0.526 Sum_probs=218.2
Q ss_pred ccccHHHHHhhcc-ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc-cccchHHHHHHHHhhcCCCceeEEeeE
Q 002105 672 KSLTIDEIISSTT-EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI-TTSSFWPDVSQFGKLIMHPNIVRLHGV 749 (966)
Q Consensus 672 ~~~~~~~~~~~~~-~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~-~~~~~~~e~~~~~~~~~H~niv~l~g~ 749 (966)
..++.+++....+ +.....+|+|++|.||+|+. .+|..||||++...... ....+.+|+..+.+ ++|||||+++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~ 95 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRNLLRLRGF 95 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGT-CCCTTBCCCCEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHh-ccCCCccceEEE
Confidence 4567777766554 45556689999999999985 67899999998654322 33457788877777 799999999999
Q ss_pred EecCCeeEEEEEccCCCCHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceE
Q 002105 750 CRSEKAAYLVYEYIEGKELSEVLRN-------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHL 822 (966)
Q Consensus 750 ~~~~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~ 822 (966)
|..++..++||||+++|+|.++++. ++|..+..++.|++.||+|||..+.++|+||||||+||+++.+. .+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~--~~ 173 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF--EA 173 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC--CE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC--CE
Confidence 9999999999999999999999973 89999999999999999999977677999999999999999654 57
Q ss_pred EEeccccceecC-------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCC---CCchhhHHHHHH
Q 002105 823 RLSVPGLAYCTD-------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADAD---FGVHESIVEWAR 892 (966)
Q Consensus 823 ~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~---~~~~~~~~~~~~ 892 (966)
+++|||.+.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||+.. ........+|..
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 899999986432 2235899999999998888999999999999999999999998621 111223446666
Q ss_pred HhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 893 YCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 893 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
............++....... .++..++.+++.+|++.||++|||++||+++|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYK--DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCC--HHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhccccC--HHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 555555555555555544433 5667788999999999999999999999999987
No 53
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.8e-37 Score=359.70 Aligned_cols=344 Identities=26% Similarity=0.336 Sum_probs=165.4
Q ss_pred CCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccC
Q 002105 110 NSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLAS 189 (966)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 189 (966)
++|+.|++++|.+.....+..+++|++|||++|.+++..| +.++++|++|++++|.+.+..| ++++++|++|++++
T Consensus 46 ~~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 46 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp HTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred ccccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 4566666666666543234555666666666666654332 5566666666666665554433 55555555555555
Q ss_pred CCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC
Q 002105 190 NQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP 269 (966)
Q Consensus 190 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 269 (966)
|.+++..+ +.++++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++.
T Consensus 122 n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~-- 192 (466)
T 1o6v_A 122 NQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI-- 192 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--
T ss_pred CCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--
Confidence 55554322 4555555555555555543 22 24455555555553 2232211 144445555555555544432
Q ss_pred hhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCC
Q 002105 270 KSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNN 349 (966)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 349 (966)
..+..+++|++|++++|.++ +..| ++.+++|+.|++++|.+++. ..+..+++
T Consensus 193 ~~l~~l~~L~~L~l~~n~l~------------------------~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 244 (466)
T 1o6v_A 193 SVLAKLTNLESLIATNNQIS------------------------DITP--LGILTNLDELSLNGNQLKDI--GTLASLTN 244 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCC------------------------CCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTT
T ss_pred hhhccCCCCCEEEecCCccc------------------------cccc--ccccCCCCEEECCCCCcccc--hhhhcCCC
Confidence 22444444444444444444 3322 33344444444444444431 23444445
Q ss_pred CcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccC
Q 002105 350 LTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISG 429 (966)
Q Consensus 350 L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~ 429 (966)
|+.|++++|.+++..| +..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++
T Consensus 245 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~ 318 (466)
T 1o6v_A 245 LTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYF 318 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCS
T ss_pred CCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcC
Confidence 5555555555443322 3333444444444444443222 4444555555555555544333 44455555555555
Q ss_pred CCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChh
Q 002105 430 NDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPE 509 (966)
Q Consensus 430 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 509 (966)
|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|
T Consensus 319 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-------------------------~~l~~l~~L~~L~l~~n~l~~~~~- 370 (466)
T 1o6v_A 319 NNISDISP--VSSLTKLQRLFFYNNKVSDV-------------------------SSLANLTNINWLSAGHNQISDLTP- 370 (466)
T ss_dssp SCCSCCGG--GGGCTTCCEEECCSSCCCCC-------------------------GGGTTCTTCCEEECCSSCCCBCGG-
T ss_pred CcCCCchh--hccCccCCEeECCCCccCCc-------------------------hhhccCCCCCEEeCCCCccCccch-
Confidence 55554433 33444445554444444432 234444455555555555544444
Q ss_pred hccccccccccccCCceecc
Q 002105 510 ELSSCKKLVSLDLSNNQLSG 529 (966)
Q Consensus 510 ~~~~l~~L~~L~Ls~N~l~~ 529 (966)
+..+++|+.|++++|.+++
T Consensus 371 -~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 371 -LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp -GTTCTTCCEEECCCEEEEC
T ss_pred -hhcCCCCCEEeccCCcccC
Confidence 4445555555555555544
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=346.88 Aligned_cols=238 Identities=21% Similarity=0.396 Sum_probs=194.6
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||+|++..++..||+|++........+.|.+|+..+.+ ++|||||++++++.+++..++||||+++|
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 92 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC-LEHPNVLKFIGVLYKDKRLNFITEYIKGG 92 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHh-CCCcCcccEEEEEecCCeeEEEEEecCCC
Confidence 34457899999999999988999999999866555556678888888877 69999999999999999999999999999
Q ss_pred CHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-------
Q 002105 767 ELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS------- 835 (966)
Q Consensus 767 ~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~------- 835 (966)
+|.++++. ++|.++..++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+.....
T Consensus 93 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 93 TLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp BHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTS--CEEECCCTTCEECC--------
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCC--CEEEeecccceecccccccccc
Confidence 99999964 899999999999999999999 45899999999999999654 478999998854211
Q ss_pred -------------CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchh----hHHHHHHHhhccC
Q 002105 836 -------------KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHE----SIVEWARYCYSDC 898 (966)
Q Consensus 836 -------------~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~ 898 (966)
...||+.|+|||++.+..++.++|||||||++|||++|..|+........ ......
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~------- 240 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL------- 240 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH-------
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc-------
Confidence 34689999999999999999999999999999999999999865322111 111111
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 899 HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 899 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
++.....++ .++.+++.+||+.||++|||++|+++.|++
T Consensus 241 ------~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~~l~~~L~~ 279 (310)
T 3s95_A 241 ------DRYCPPNCP------PSFFPITVRCCDLDPEKRPSFVKLEHWLET 279 (310)
T ss_dssp ------HHTCCTTCC------TTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------cccCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111122 146678889999999999999999999998
No 55
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-37 Score=340.65 Aligned_cols=239 Identities=17% Similarity=0.271 Sum_probs=190.7
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+...++..||||++........+.+.+|+..+.+ ++|||||++++++..++..++||||+++
T Consensus 23 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 101 (297)
T 3fxz_A 23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAG 101 (297)
T ss_dssp CCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhc-CCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence 445567999999999999989999999999876554455567778777777 7999999999999999999999999999
Q ss_pred CCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------CCC
Q 002105 766 KELSEVLRN--LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------SKS 837 (966)
Q Consensus 766 g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------~~~ 837 (966)
|+|.++++. +++.....++.|++.||+|||. .+|+||||||+||+++.+. .++++|||++.... ...
T Consensus 102 ~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 102 GSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp CBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSTTCCBCCC
T ss_pred CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCC--CEEEeeCCCceecCCcccccCCc
Confidence 999999974 8999999999999999999994 5899999999999998664 57899999875422 234
Q ss_pred cCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHH
Q 002105 838 INSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQN 917 (966)
Q Consensus 838 ~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 917 (966)
.||+.|+|||++.+..++.++|||||||++|||+||+.||..... .......... ... .... ....+
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~----~~~-~~~~---~~~~~---- 243 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LRALYLIATN----GTP-ELQN---PEKLS---- 243 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHH----CSC-CCSC---GGGSC----
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhC----CCC-CCCC---ccccC----
Confidence 689999999999999999999999999999999999999975321 1111111111 000 0000 11111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 918 EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 918 ~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 244 --~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 244 --AIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 24567788999999999999999976
No 56
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.2e-37 Score=343.10 Aligned_cols=254 Identities=16% Similarity=0.257 Sum_probs=198.6
Q ss_pred ccccHHHHHhhcc-----------ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCC
Q 002105 672 KSLTIDEIISSTT-----------EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMH 740 (966)
Q Consensus 672 ~~~~~~~~~~~~~-----------~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H 740 (966)
..++.+++..++. ......+|+|++|.||+|+...+|..||||++........+.+.+|+..+.+ ++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRD-YQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTT-CCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHh-CCC
Confidence 4567777766553 1334467999999999999977999999999876555455567888888877 699
Q ss_pred CceeEEeeEEecCCeeEEEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC
Q 002105 741 PNIVRLHGVCRSEKAAYLVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD 818 (966)
Q Consensus 741 ~niv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~ 818 (966)
||||+++++|..++..++||||+++|+|.++++ .++|..+..++.|+++||+|||. .+|+||||||+||+++.+.
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTC
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCC
Confidence 999999999999999999999999999999997 48999999999999999999994 5899999999999999654
Q ss_pred CceEEEeccccceecC------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHH
Q 002105 819 EPHLRLSVPGLAYCTD------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWAR 892 (966)
Q Consensus 819 ~~~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 892 (966)
.++++|||++.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.... .........
T Consensus 179 --~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~--~~~~~~~~~ 254 (321)
T 2c30_A 179 --RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS--PVQAMKRLR 254 (321)
T ss_dssp --CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHH
T ss_pred --cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHh
Confidence 57899999875422 23478999999999999999999999999999999999999987532 111112111
Q ss_pred HhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 893 YCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 893 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
. . ..|.... .. ....++.+++.+|++.||++|||++||++.
T Consensus 255 ~---~------~~~~~~~-~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 255 D---S------PPPKLKN-SH---KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp H---S------SCCCCTT-GG---GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred c---C------CCCCcCc-cc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1 1111100 00 011245677889999999999999999863
No 57
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2e-36 Score=353.59 Aligned_cols=347 Identities=27% Similarity=0.384 Sum_probs=270.9
Q ss_pred cCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEE
Q 002105 82 FHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVL 161 (966)
Q Consensus 82 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 161 (966)
..+++|+.|++++|.+. .+|. +..+++|++|+|++|.+++..+++.+++|++|++++|.+++..+ +..+++|++|
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~--~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG--VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hHhccccEEecCCCCCc-cCcc--hhhhcCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 34678999999999998 5774 56679999999999999987778999999999999999997655 9999999999
Q ss_pred EccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeeccccc
Q 002105 162 DLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLT 241 (966)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 241 (966)
++++|.+.+..+ +.++++|++|++++|.+.+ ++ .++.+++|++|+++ |.+.+. ..+.++++|++|++++|.++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCc--hhhccCCCCCEEECcCCcCC
Confidence 999999987544 8999999999999999886 33 58999999999997 555543 23899999999999999998
Q ss_pred ccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCC
Q 002105 242 GQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLA 321 (966)
Q Consensus 242 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 321 (966)
+. ..+.++++|++|++++|++++..| +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 53 458899999999999999987655 78899999999999999864 467888999999999999887655 78
Q ss_pred CCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCcee
Q 002105 322 SMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRV 401 (966)
Q Consensus 322 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 401 (966)
.+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|++|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 88899999999998886543 7778888888888888876443 5556666666666666665544 4556666666
Q ss_pred eccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCc
Q 002105 402 RLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSG 458 (966)
Q Consensus 402 ~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 458 (966)
++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 6666666554 245555555555555555555444 4445555555555555443
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.3e-37 Score=338.75 Aligned_cols=246 Identities=21% Similarity=0.340 Sum_probs=187.5
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+. .|..||||++..... ...+++.+|+..+.+ ++|||||++++++..++..++||||+
T Consensus 40 ~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~ 116 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKR-LRHPNIVLFMGAVTQPPNLSIVTEYL 116 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHH-CCCTTBCCEEEEECSTTCCEEEEECC
T ss_pred eeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCceEEEEecC
Confidence 4455679999999999975 688999999865432 223457788888877 69999999999999999999999999
Q ss_pred CCCCHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----
Q 002105 764 EGKELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---- 833 (966)
Q Consensus 764 ~~g~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---- 833 (966)
++|+|.++++. +++..+..++.|+++||+|||.. .++|+||||||+||+++.+. .++++|||++...
T Consensus 117 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 117 SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKASTF 193 (309)
T ss_dssp TTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTC--CEEECCCC---------
T ss_pred CCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCC--cEEECCCCCCccccccc
Confidence 99999999963 89999999999999999999944 22399999999999999654 5788999987532
Q ss_pred --CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCC
Q 002105 834 --DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGH 911 (966)
Q Consensus 834 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 911 (966)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.... .......+.. .... +.+...
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~--~~~~~~~~~~--~~~~------~~~~~~ 263 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN--PAQVVAAVGF--KCKR------LEIPRN 263 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC--HHHHHHHHHH--SCCC------CCCCTT
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHh--cCCC------CCCCcc
Confidence 223468999999999999999999999999999999999999997532 1111121111 1100 111112
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 912 VSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 912 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.+ .++.+++.+||+.||++|||++||++.|+..++.
T Consensus 264 ~~------~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 264 LN------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp SC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 22 2466788899999999999999999999996654
No 59
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.8e-37 Score=344.16 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=189.7
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCC----eeEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK----AAYLVY 760 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~----~~~lv~ 760 (966)
+.....+|+|+||.||+|+. .+..||||++.... .....+..|+..+.+ ++|||||++++++..+. ..++||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQD-KQSWQNEYEVYSLPG-MKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGG-HHHHHHHHHHHTSTT-CCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred chhhheecccCceEEEEEEE--CCCEEEEEEeecCc-hHHHHHHHHHHHHhc-CCCCCchhhcceeccCCCCCceEEEEE
Confidence 34455679999999999986 47899999985432 222334556666666 69999999999998744 479999
Q ss_pred EccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhc-------CCCCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105 761 EYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFH-------CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY 831 (966)
Q Consensus 761 Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~-------~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~ 831 (966)
||+++|+|.++++. ++|..+..++.|+++||+|||.. +.++|+||||||+||+++.+. .++++|||.+.
T Consensus 102 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~--~~kL~DFg~a~ 179 (322)
T 3soc_A 102 AFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL--TACIADFGLAL 179 (322)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC--CEEECCCTTCE
T ss_pred ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC--eEEEccCCccc
Confidence 99999999999974 89999999999999999999943 123999999999999998654 57899999985
Q ss_pred ecC--------CCCcCCcccccccccCC-----CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchh-----------hH
Q 002105 832 CTD--------SKSINSSAYVAPETKES-----KDITEKGDIYGFGLILIDLLTGKSPADADFGVHE-----------SI 887 (966)
Q Consensus 832 ~~~--------~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~-----------~~ 887 (966)
... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+...... ..
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 421 22468999999999876 3566789999999999999999999975432110 11
Q ss_pred HHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 888 VEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 888 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
.++........ ..|.+..... ......++.+++.+||+.||++|||++||+++|+++.
T Consensus 260 ~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 260 EDMQEVVVHKK-----KRPVLRDYWQ-KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHHHHHTTSC-----CCCCCCGGGG-SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhhhhhhccc-----CCCCcccccc-ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111111 1122211111 1234556888999999999999999999999999843
No 60
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.4e-36 Score=334.81 Aligned_cols=265 Identities=25% Similarity=0.431 Sum_probs=205.1
Q ss_pred ccccHHHHHhhcccccc-------ccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc----cccchHHHHHHHHhhcCC
Q 002105 672 KSLTIDEIISSTTEENL-------TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI----TTSSFWPDVSQFGKLIMH 740 (966)
Q Consensus 672 ~~~~~~~~~~~~~~~~~-------~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~----~~~~~~~e~~~~~~~~~H 740 (966)
..|+++++..++..... ..+|+|++|.||+|+. ++..||||++...... ..+.+.+|+..+.+ ++|
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h 89 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK-CQH 89 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH-CCC
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHh-cCC
Confidence 56788888887754221 3478999999999985 6889999998654322 23456778877777 699
Q ss_pred CceeEEeeEEecCCeeEEEEEccCCCCHHHHHH------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEE
Q 002105 741 PNIVRLHGVCRSEKAAYLVYEYIEGKELSEVLR------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIV 814 (966)
Q Consensus 741 ~niv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill 814 (966)
||||++++++.+++..++||||+++|+|.+++. .++|..+..++.|++.||+||| ..+|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 999999999999999999999999999999996 2899999999999999999999 4589999999999999
Q ss_pred cCCCCceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhh
Q 002105 815 DGKDEPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHES 886 (966)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~ 886 (966)
+.+. .++++|||.+.... ....||+.|+|||...+ .++.++|||||||++|||+||+.||...... ..
T Consensus 167 ~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~ 242 (307)
T 2nru_A 167 DEAF--TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QL 242 (307)
T ss_dssp CTTC--CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SB
T ss_pred cCCC--cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-HH
Confidence 8654 57899999876432 23468999999998865 5899999999999999999999999754322 11
Q ss_pred HHHHHHHhhc-cCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 887 IVEWARYCYS-DCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 887 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
...+...... ......++++.+... ......++.+++.+||+.||.+|||++||++.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSCSCC---CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhhhhcccccccc---chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1122222111 122223344433221 13455678889999999999999999999999998
No 61
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-36 Score=343.76 Aligned_cols=245 Identities=19% Similarity=0.316 Sum_probs=191.5
Q ss_pred cccccCCCCCccEEEEEEEe-------cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKVRSL-------ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~-------~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
.....+|+|+||.||+|+.. .++..||||++..... ...+.+.+|+..+.++.+|||||+++++|..++..|
T Consensus 84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ 163 (370)
T 2psq_A 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 163 (370)
T ss_dssp EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCE
T ss_pred EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEE
Confidence 33456799999999999875 2445799998864322 223457888888877338999999999999999999
Q ss_pred EEEEccCCCCHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC
Q 002105 758 LVYEYIEGKELSEVLRN-------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD 818 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~ 818 (966)
+||||+++|+|.++++. ++|.++..++.||++||+||| ..+|+||||||+|||++.++
T Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTC
T ss_pred EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEECCCC
Confidence 99999999999999963 689999999999999999999 45899999999999998654
Q ss_pred CceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHH
Q 002105 819 EPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVE 889 (966)
Q Consensus 819 ~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~ 889 (966)
.++++|||++.... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.. ...+..
T Consensus 241 --~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~~~~ 316 (370)
T 2psq_A 241 --VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFK 316 (370)
T ss_dssp --CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHH
T ss_pred --CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHH
Confidence 57899999986422 22346788999999999999999999999999999999 999987532 222222
Q ss_pred HHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 890 WARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 890 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.... ... +.....++ .++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 317 ~~~~---~~~------~~~~~~~~------~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 317 LLKE---GHR------MDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHT---TCC------CCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhc---CCC------CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2211 110 11111122 256678889999999999999999999998654
No 62
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=340.21 Aligned_cols=247 Identities=21% Similarity=0.306 Sum_probs=192.9
Q ss_pred cccccCCCCCccEEEEEEEecCCc---EEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDM---QFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~---~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
.....+|+|++|.||+|+...++. .||||++.... ....+.|.+|+..+.+ ++|||||++++++.+++..|+|||
T Consensus 52 ~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e 130 (325)
T 3kul_A 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ-FDHPNIIRLEGVVTRGRLAMIVTE 130 (325)
T ss_dssp EEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECGGGCCEEEEE
T ss_pred EEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCccEEEee
Confidence 444567999999999999875544 59999986542 2234567888888877 699999999999999999999999
Q ss_pred ccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 762 YIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 762 y~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
|+++|+|.++++ .+++..+..++.|++.||+||| ..+|+||||||+||+++.+. .++++|||++....
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCCSSCEECC---
T ss_pred CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCC--CEEECCCCcccccccCc
Confidence 999999999995 4899999999999999999999 45899999999999998654 57899999886432
Q ss_pred ------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 835 ------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 835 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+.+.+. .... +.
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~---~~~~------~~ 274 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--NRDVISSVE---EGYR------LP 274 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--HHHHHHHHH---TTCC------CC
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHH---cCCC------CC
Confidence 12245678999999998899999999999999999999 999986532 111112111 1111 00
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISS 955 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~ 955 (966)
....++ .++.+++.+||+.||++|||++||+++|+++++...
T Consensus 275 ~~~~~~------~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 275 APMGCP------HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CCCCcC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 111122 256678889999999999999999999999666543
No 63
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-36 Score=341.66 Aligned_cols=242 Identities=21% Similarity=0.309 Sum_probs=191.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc------ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT------TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~------~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
.....+|+|+||.||+++...+|..||+|.+....... .+.+.+|+..+.+ ++|||||++++++.+++..|+|
T Consensus 15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ-VLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEE
T ss_pred EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHh-CCCcCCCcEEEEEEeCCEEEEE
Confidence 34456789999999999998899999999987543321 2356788877777 6999999999999999999999
Q ss_pred EEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC--ceEEEeccccceecC
Q 002105 760 YEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE--PHLRLSVPGLAYCTD 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~--~~~~~~~~~~~~~~~ 834 (966)
|||+++|+|.+++. .+++.....++.||+.||+|||. .+|+||||||+||+++.+.. ..++++|||++....
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp EECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 99999999999996 38999999999999999999994 59999999999999986553 368999999986532
Q ss_pred -----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105 835 -----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 835 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .+.. ..+. . ... . .++...
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-~~~~-~~i~---~-~~~-~-~~~~~~ 242 (361)
T 2yab_A 171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETL-ANIT---A-VSY-D-FDEEFF 242 (361)
T ss_dssp TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHH-HHHH---T-TCC-C-CCHHHH
T ss_pred CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHH---h-cCC-C-CCchhc
Confidence 235689999999999999999999999999999999999999976421 1111 1111 1 000 0 111111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...+ .++.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~s------~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 243 SQTS------ELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp TTSC------HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCC------HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1122 24567788999999999999999874
No 64
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=349.10 Aligned_cols=303 Identities=20% Similarity=0.187 Sum_probs=198.0
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 211 (966)
.+|++|||++|++++..|..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 34555555555555555556666666666666666666555666666666666666666666544445566666666666
Q ss_pred cCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCccc
Q 002105 212 GYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGE 291 (966)
Q Consensus 212 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (966)
++|.+++..|..|.++++|++|++++|.+++..|..|.++++|++|++++|++++..+..+.++++|+.|++++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 66666666666666666677777777666666666666777777777777776655555666677777777777777666
Q ss_pred CchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCC
Q 002105 292 IPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDS 371 (966)
Q Consensus 292 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~ 371 (966)
.+..+..+++|+.|++++|.+.+.+|.......+|+.|++++|.+++..+..+..+++|+.|+|++|.+++..+..|..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 66666666777777777666666666555555577777777777764433456667777777777777776666666666
Q ss_pred CCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCC
Q 002105 372 GSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSG 434 (966)
Q Consensus 372 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~ 434 (966)
++|+.|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|++++|.+..
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 666666666666666666666666677777777777666666666666666666666666654
No 65
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=347.07 Aligned_cols=247 Identities=19% Similarity=0.299 Sum_probs=192.7
Q ss_pred cccccCCCCCccEEEEEEE-----ecCCcEEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRS-----LANDMQFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~-----~~~~~~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
.....+|+|+||.||+|+. ..++..||||++... .......+.+|+..+.+ ++|||||++++++..++..++|
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv 152 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIVRCIGVSLQSLPRFIL 152 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEE
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCCCEEE
Confidence 4455689999999999994 456778999998543 22233457788887777 6999999999999999999999
Q ss_pred EEccCCCCHHHHHHc----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccc
Q 002105 760 YEYIEGKELSEVLRN----------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPG 828 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~----------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~ 828 (966)
||||++|+|.++++. +++.++..++.||++||+||| +.+|+||||||+|||++.++ ...++++|||
T Consensus 153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 999999999999963 889999999999999999999 45899999999999998543 3457899999
Q ss_pred ccee--------cCCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCc
Q 002105 829 LAYC--------TDSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCH 899 (966)
Q Consensus 829 ~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 899 (966)
++.. ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+.+.+. ....
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--~~~~~~~i~---~~~~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFVT---SGGR 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH---TTCC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCC
Confidence 8853 1122457889999999988899999999999999999998 999987542 222222221 1111
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 900 LDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 900 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
. ......+ .++.+++.+||+.||++|||+.||++.|+.+...
T Consensus 305 ~------~~~~~~~------~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 305 M------DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp C------CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C------CCCccCC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0 0111121 2466788899999999999999999999985543
No 66
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.9e-37 Score=338.48 Aligned_cols=251 Identities=20% Similarity=0.336 Sum_probs=189.7
Q ss_pred ccccCCCCCccEEEEEEEecCC-------cEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLAND-------MQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~-------~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
....+|+|++|.||+|+...++ ..||+|++........+.+.+|+..+.+ ++|||||++++++..++..++|
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv 90 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK-LSHKHLVLNYGVCVCGDENILV 90 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHT-SCCTTBCCEEEEECCTTCCEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEEeCCCCEEE
Confidence 3445789999999999987766 4699998866554555668888888877 6999999999999999999999
Q ss_pred EEccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCc------eEEEecccc
Q 002105 760 YEYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEP------HLRLSVPGL 829 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~------~~~~~~~~~ 829 (966)
|||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+... .++++|||.
T Consensus 91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~ 167 (289)
T 4fvq_A 91 QEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167 (289)
T ss_dssp EECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCS
T ss_pred EECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeeccCcc
Confidence 999999999999963 899999999999999999999 4589999999999999876542 278999998
Q ss_pred ceecCC--CCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 830 AYCTDS--KSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 830 ~~~~~~--~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
+..... ...+|+.|+|||++.+ ..++.++|||||||++|||+||..|+.......... .... .... ..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~---~~~~----~~- 238 (289)
T 4fvq_A 168 SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYE---DRHQ----LP- 238 (289)
T ss_dssp CTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHH---TTCC----CC-
T ss_pred cccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhh---ccCC----CC-
Confidence 754322 2347889999999887 778999999999999999999665543322211111 1111 1100 11
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCcCCC
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISSCVSG 959 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~~~~~ 959 (966)
...+ .++.+++.+||+.||++|||++|+++.|++++.+...+.+
T Consensus 239 ---~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 239 ---APKA------AELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp ---CCSS------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred ---CCCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 1111 1356678899999999999999999999996665444333
No 67
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=338.27 Aligned_cols=236 Identities=22% Similarity=0.270 Sum_probs=183.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|++..+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++.+.+..++|||||+
T Consensus 13 ~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~-l~hpnIv~l~~~~~~~~~~~lv~E~~~ 91 (347)
T 3zgw_A 13 ELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKN-LRHQHICQLYHVLETANKIFMVLEYCP 91 (347)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHh-CCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 345567899999999999989999999999865432 234557788887777 799999999999999999999999999
Q ss_pred CCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105 765 GKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------- 834 (966)
Q Consensus 765 ~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------- 834 (966)
+|+|.+++. .+++.++..++.||+.||+||| +.+|+||||||+||+++.+. .++++|||++....
T Consensus 92 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~ 166 (347)
T 3zgw_A 92 GGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYH--KLKLIDFGLCAKPKGNKDYHL 166 (347)
T ss_dssp TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCCTTCBC---------
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCC--CEEEEeccCcccccCCCCccc
Confidence 999999985 4899999999999999999999 45899999999999998654 57899999875421
Q ss_pred CCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||++.+..+ +.++||||+||++|||+||+.||.... ..+.. +.+. .. .. .+....+
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-~~~~~-~~i~---~~-~~------~~p~~~s 234 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-VMALY-KKIM---RG-KY------DVPKWLS 234 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHH-HHHH---HT-CC------CCCTTCC
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-HHHHH-HHHH---cC-CC------CCCCCCC
Confidence 23468999999999988876 889999999999999999999997542 11111 1111 11 10 0111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 235 ------~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 235 ------PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 24556788999999999999999985
No 68
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=343.67 Aligned_cols=239 Identities=20% Similarity=0.251 Sum_probs=187.1
Q ss_pred ccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCH
Q 002105 689 TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKEL 768 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L 768 (966)
..+|+|++|.||+|+...+|..||+|++........+.+.+|+..+.+ ++|||||+++++|.+++..++||||+++|+|
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQ-LDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 457999999999999988999999999876544455678888888877 6999999999999999999999999999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----CCCcC
Q 002105 769 SEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-----SKSIN 839 (966)
Q Consensus 769 ~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-----~~~~~ 839 (966)
.+++. .+++..+..++.||++||+||| +.+|+||||||+|||++.+....++++|||++.... ....|
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~g 250 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG 250 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCS
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccC
Confidence 99885 4899999999999999999999 458999999999999965455678999999986532 23468
Q ss_pred CcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHHH
Q 002105 840 SSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEI 919 (966)
Q Consensus 840 ~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 919 (966)
|+.|+|||++.+..++.++|||||||++|||+||+.||.+... .+.+.......+. ..+......+
T Consensus 251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~-------~~~~~~~~~~------ 316 (373)
T 2x4f_A 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWD-------LEDEEFQDIS------ 316 (373)
T ss_dssp SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC-------SCSGGGTTSC------
T ss_pred CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCC-------CChhhhccCC------
Confidence 9999999999999999999999999999999999999975421 2222122111110 1111111121
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 920 VEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 920 ~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 317 ~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 317 EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 25667888999999999999999985
No 69
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.3e-36 Score=333.79 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=185.9
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhh-cCCCceeEEeeEEec----CCeeEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKL-IMHPNIVRLHGVCRS----EKAAYLVY 760 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~-~~H~niv~l~g~~~~----~~~~~lv~ 760 (966)
.....+|+|++|.||+|+. ++..||||++... ....+..|.+.+... ++|||||++++++.. .+..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 11 TLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 4455678999999999986 7889999988543 223344554444332 689999999999754 34689999
Q ss_pred EccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105 761 EYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHC-----SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 761 Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~-----~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~ 833 (966)
||+++|+|.++++ .+++..+.+++.|++.||+|||... +.+|+||||||+||+++.+. .++++|||++...
T Consensus 86 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 86 HYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMH 163 (301)
T ss_dssp CCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS--CEEECCCTTCEEE
T ss_pred hhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC--CEEEeeCCCeeec
Confidence 9999999999997 4899999999999999999999322 56999999999999999654 5789999987532
Q ss_pred ----------CCCCcCCcccccccccCCC------CCCCcchHHHHHHHHHHHHcC----------CCCCCCCCCchhhH
Q 002105 834 ----------DSKSINSSAYVAPETKESK------DITEKGDIYGFGLILIDLLTG----------KSPADADFGVHESI 887 (966)
Q Consensus 834 ----------~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~el~tg----------~~p~~~~~~~~~~~ 887 (966)
.....||+.|+|||++.+. .++.++|||||||++|||+|| +.||..........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~ 243 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence 1223789999999998876 455799999999999999999 88876543222222
Q ss_pred HHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 888 VEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 888 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
............ .+.+..... ......++.+++.+||+.||++|||+.||+++|++
T Consensus 244 ~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 244 EDMRKVVCVDQQ-----RPNIPNRWF-SDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp HHHHHHHTTSCC-----CCCCCGGGG-GSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred hhhhHHHhccCC-----CCCCChhhc-cCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 111111111111 111111100 12345578889999999999999999999999987
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.6e-37 Score=347.54 Aligned_cols=246 Identities=20% Similarity=0.308 Sum_probs=184.8
Q ss_pred cccccCCCCCccEEEEEEEe---cCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSL---ANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~---~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
.....+|+|++|.||+|+.. .++..||||++.... ....++|.+|+..+.+ ++|||||+++|+|.+++..++|||
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e 126 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ-FDHPNIIRLEGVVTKSKPVMIVTE 126 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEeeCCceEEEEe
Confidence 44456789999999999875 357789999886432 2234568888888877 699999999999999999999999
Q ss_pred ccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC--
Q 002105 762 YIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS-- 835 (966)
Q Consensus 762 y~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~-- 835 (966)
|+++|+|.++++ .++|.++..++.||++||+|||. .+|+||||||+||+++.+. .++++|||++.....
T Consensus 127 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNL--VCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTC--CEEECCC----------
T ss_pred CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCC--CEEECcCccccccccCC
Confidence 999999999996 38999999999999999999994 5899999999999998654 578999998764221
Q ss_pred -------CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 836 -------KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 836 -------~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ...+.+.+.. ... .|
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--~~~~~~~i~~---~~~-----~~- 270 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--NQDVIKAVDE---GYR-----LP- 270 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--HHHHHHHHHT---TEE-----CC-
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc---CCC-----CC-
Confidence 1234668999999999999999999999999999998 999986531 1222122211 100 00
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
..... ..++.+++.+||+.||++||+|.||+++|+++++..
T Consensus 271 ~~~~~------~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 271 PPMDC------PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp CCTTC------BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CCccc------cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 01111 235677889999999999999999999999966543
No 71
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.2e-36 Score=343.66 Aligned_cols=256 Identities=16% Similarity=0.219 Sum_probs=189.2
Q ss_pred ccccccCCCCCccEEEEEEEecC-----CcEEEEEEEeccCcc-----------cccchHHHHHHHHhhcCCCceeEEee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLAN-----DMQFVVKKIIDVNTI-----------TTSSFWPDVSQFGKLIMHPNIVRLHG 748 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~-----~~~vavk~~~~~~~~-----------~~~~~~~e~~~~~~~~~H~niv~l~g 748 (966)
+.....+|+|+||.||+|.+..+ +..||||.+...... ....+..|+..+.+ ++|||||++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~ 115 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRK-LKYLGVPKYWG 115 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTT-CSCCCSCCEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhh-ccCCCCCeEEe
Confidence 44556689999999999988543 478999988654321 01112233333334 68999999999
Q ss_pred EEecC----CeeEEEEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCc
Q 002105 749 VCRSE----KAAYLVYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEP 820 (966)
Q Consensus 749 ~~~~~----~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~ 820 (966)
++... ...|+||||+ +|+|.++++ .++|..+..++.||+.||+|||. .+|+||||||+|||++.+...
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTT
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCC
Confidence 99764 4589999999 999999995 38999999999999999999994 599999999999999954556
Q ss_pred eEEEeccccceecC-------------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhH
Q 002105 821 HLRLSVPGLAYCTD-------------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESI 887 (966)
Q Consensus 821 ~~~~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~ 887 (966)
.++++|||++.... ....||+.|||||++.+..++.++|||||||++|||+||+.||..........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 78999999985421 22348999999999999999999999999999999999999997543322221
Q ss_pred HHHHHHhhccCccccccccccc-CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 888 VEWARYCYSDCHLDTWVDPFIR-GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 888 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.+....... ....++++.+. ...+ .++.+++..||+.||++||++++|++.|+++++.
T Consensus 272 -~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 272 -RDSKIRYRE-NIASLMDKCFPAANAP------GEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp -HHHHHHHHH-CHHHHHHHHSCTTCCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHhhh-hHHHHHHHhcccccCH------HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 222211111 11112222221 1111 3566788899999999999999999999987664
No 72
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.7e-37 Score=342.80 Aligned_cols=237 Identities=22% Similarity=0.322 Sum_probs=188.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
+.....+|+|++|.||+|++..+|..||||++.... ....+.+.+|+..+.+ ++|||||++++++..++..|+||||
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI-LNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCEEEEEEEC
Confidence 344556799999999999998999999999986542 2223456788877777 7999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+++|+|.+++. .+++.....++.|+++||+||| +.+|+||||||+||+++.+. .++++|||++....
T Consensus 96 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 96 ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTS--CEEECSTTCCGGGSSSCGG
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCC--CEEEeeccCceecCCCCcc
Confidence 99999999985 4899999999999999999999 45899999999999998654 57899999885422
Q ss_pred CCCcCCcccccccccCCCCCC-CcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDIT-EKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~-~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||++.+..++ .++||||+||++|||+||+.||.+.. ...+.+.+ ... .. .+....+
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i---~~~-~~------~~p~~~s 238 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRERV---LRG-KY------RIPFYMS 238 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHC-CC------CCCTTSC
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--HHHHHHHH---HhC-CC------CCCCCCC
Confidence 335789999999999888875 79999999999999999999997542 11111111 111 00 0111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 239 ------~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 239 ------TDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ------HHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ------HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 24567788999999999999999875
No 73
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=351.36 Aligned_cols=321 Identities=22% Similarity=0.195 Sum_probs=278.3
Q ss_pred cEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCC
Q 002105 135 EILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYN 214 (966)
Q Consensus 135 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N 214 (966)
+.++.+++.++ .+|..+. ++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56778888887 4666553 68999999999999988899999999999999999999988999999999999999999
Q ss_pred CCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCch
Q 002105 215 NLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPE 294 (966)
Q Consensus 215 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 294 (966)
.+++..+..|.++++|++|+|++|++.+..|..|.++++|++|++++|.+++..+..|.++++|++|++++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99876667789999999999999999998899999999999999999999988888999999999999999999987777
Q ss_pred hhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCc
Q 002105 295 EVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSL 374 (966)
Q Consensus 295 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L 374 (966)
.+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+|.......+|+.|++++|.+++..+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 88999999999999999998888889999999999999998888888777777789999999998886554567778888
Q ss_pred cEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCC
Q 002105 375 FKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGN 454 (966)
Q Consensus 375 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N 454 (966)
+.|++++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 88888888888777777888888888888888888887888888888888888888888776666777777777777777
Q ss_pred cCCc
Q 002105 455 NFSG 458 (966)
Q Consensus 455 ~l~~ 458 (966)
.+..
T Consensus 331 ~l~c 334 (477)
T 2id5_A 331 PLAC 334 (477)
T ss_dssp CEEC
T ss_pred CccC
Confidence 7764
No 74
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-36 Score=336.82 Aligned_cols=240 Identities=19% Similarity=0.256 Sum_probs=189.9
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||+++...++..||+|.+... ......+.+|+..+.+ ++|||||++++++.+++..++|||||++|
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~e~~~g~ 86 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNI-ARHRNILHLHESFESMEELVMIFEFISGL 86 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHH-SCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHh-CCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence 344578999999999999888999999987533 2233456778877776 79999999999999999999999999999
Q ss_pred CHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----CC
Q 002105 767 ELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS-----KS 837 (966)
Q Consensus 767 ~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~-----~~ 837 (966)
+|.+++. .+++.++..++.|++.||+||| ..+|+||||||+||+++.+....++++|||.+..... ..
T Consensus 87 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 163 (321)
T 1tki_A 87 DIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp BHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence 9999996 3889999999999999999999 4599999999999999975567789999999865432 23
Q ss_pred cCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHH
Q 002105 838 INSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQN 917 (966)
Q Consensus 838 ~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 917 (966)
.||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+.. +.+. ... .. .++......+
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~-~~i~---~~~-~~--~~~~~~~~~s---- 231 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQII-ENIM---NAE-YT--FDEEAFKEIS---- 231 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHH-HHHH---HTC-CC--CCHHHHTTSC----
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-HHHH-HHHH---cCC-CC--CChhhhccCC----
Confidence 589999999999998899999999999999999999999975421 1111 1111 110 00 1110111111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 918 EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 918 ~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 232 --~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 232 --IEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp --HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 35667888999999999999999986
No 75
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.5e-37 Score=347.26 Aligned_cols=242 Identities=22% Similarity=0.333 Sum_probs=192.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...++..||||++.... ....++|.+|+..+.+ ++|||||+++|+|..++..|+|||||+
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~ 195 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ-YSHPNIVRLIGVCTQKQPIYIVMELVQ 195 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence 34456799999999999997789999999876432 2233568888888877 699999999999999999999999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS----- 835 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~----- 835 (966)
+|+|.++++ .+++..+..++.|||+||+||| +.+|+||||||+|||++.+. .++++|||++.....
T Consensus 196 ~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~--~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKN--VLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCGGGCEECTTSEEEC
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCC--cEEECcCCCceecCCCceee
Confidence 999999996 3899999999999999999999 45899999999999998654 578999998864321
Q ss_pred ---CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCC
Q 002105 836 ---KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGH 911 (966)
Q Consensus 836 ---~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 911 (966)
...+++.|+|||.+.+..++.++|||||||++|||+| |+.||.... ...+.+.+.. .... .....
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~~---~~~~------~~~~~ 339 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVEK---GGRL------PCPEL 339 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHHT---TCCC------CCCTT
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc---CCCC------CCCCC
Confidence 1124567999999988889999999999999999999 999986531 1222222211 1111 01111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 002105 912 VSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESC 950 (966)
Q Consensus 912 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~ 950 (966)
++ .++.+++.+||+.||++|||+++|+++|+++
T Consensus 340 ~~------~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 340 CP------DAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp CC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 22 2566788899999999999999999999984
No 76
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3e-36 Score=338.33 Aligned_cols=241 Identities=23% Similarity=0.317 Sum_probs=189.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-----cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-----TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-----~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
.....+|+|++|.||+|+...+|..||||++.... ....+.+.+|+..+.+ ++|||||++++++.+++..|+||
T Consensus 27 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~ 105 (351)
T 3c0i_A 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM-LKHPHIVELLETYSSDGMLYMVF 105 (351)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEE
Confidence 44556789999999999998899999999985321 1233457788877777 69999999999999999999999
Q ss_pred EccCCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEecccccee
Q 002105 761 EYIEGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYC 832 (966)
Q Consensus 761 Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~ 832 (966)
|||++|+|.+++. .+++..+..++.||+.||+||| +.+|+||||||+||+++.+. ...++++|||++..
T Consensus 106 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 106 EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp ECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 9999999988874 2789999999999999999999 45899999999999998653 35589999999865
Q ss_pred cC------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 833 TD------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 833 ~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
.. ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+. .+...+... .. ... .++
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~---~~-~~~--~~~ 253 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGII---KG-KYK--MNP 253 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHH---HT-CCC--CCH
T ss_pred ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHH---cC-CCC--CCc
Confidence 32 2346899999999999999999999999999999999999999753 121111111 11 000 111
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
......+ .++.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~s------~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 RQWSHIS------ESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCC------HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111121 25667888999999999999999874
No 77
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=8.8e-36 Score=326.72 Aligned_cols=251 Identities=13% Similarity=0.127 Sum_probs=197.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+...++..||||++.... ..+.+.+|+..+.++.+||||+++++++..+...++||||+ +
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 89 (298)
T 1csn_A 13 KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-G 89 (298)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-C
Confidence 34455788999999999998899999999885432 34568888888888558999999999999999999999999 9
Q ss_pred CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC---ceEEEeccccceecC----
Q 002105 766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE---PHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~---~~~~~~~~~~~~~~~---- 834 (966)
|+|.++++ .+++..+..++.||++||+||| +.+|+||||||+||+++.+.. ..++++|||.+....
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 90 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 99999997 3899999999999999999999 569999999999999986432 348999999986422
Q ss_pred ---------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-hhhHHHHHHHhhccCcccccc
Q 002105 835 ---------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV-HESIVEWARYCYSDCHLDTWV 904 (966)
Q Consensus 835 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 904 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...... .......+.........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 242 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL---- 242 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH----
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH----
Confidence 2345899999999999999999999999999999999999999764322 11111111111000000
Q ss_pred cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+.....++ .++.+++.+||+.||++||++++|++.|+++++.
T Consensus 243 -~~~~~~~~------~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 243 -RELCAGFP------EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp -HHHTTTSC------HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHhhCc------HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 00111122 3566788899999999999999999999996654
No 78
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=335.53 Aligned_cols=241 Identities=22% Similarity=0.320 Sum_probs=190.4
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc------cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI------TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~------~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
....+|+|++|.||+|+...+|..||+|.+...... ..+.+.+|+..+.+ ++|||||++++++.+++..++||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~ 93 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE-IQHPNVITLHEVYENKTDVILIL 93 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEE
Confidence 345578999999999999889999999998654322 23457788888777 69999999999999999999999
Q ss_pred EccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC--CceEEEeccccceecC-
Q 002105 761 EYIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD--EPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 761 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~--~~~~~~~~~~~~~~~~- 834 (966)
||+++|+|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.+. ...++++|||++....
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 170 (326)
T 2y0a_A 94 ELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170 (326)
T ss_dssp ECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred EcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence 99999999999963 899999999999999999999 45899999999999998754 2368999999986532
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+... .+.. ..... .... ..+....
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~-~~~~~--~~~~----~~~~~~~ 242 (326)
T 2y0a_A 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETL-ANVSA--VNYE----FEDEYFS 242 (326)
T ss_dssp TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHH-HHHHH--TCCC----CCHHHHT
T ss_pred CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-HHHH-HHHHh--cCCC----cCccccc
Confidence 234689999999999999999999999999999999999999975421 1111 11111 0000 0000111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..+ .++.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~------~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 243 NTS------ALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp TSC------HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCC------HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 24667888999999999999999975
No 79
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2e-36 Score=331.21 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=193.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||++++..++..||+|++....... .+.+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~ 92 (294)
T 4eqm_A 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ-LSHQNIVSMIDVDEEDDCYYLVMEY 92 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTT-CCBTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhc-CCCCCCceEEEeeeeCCeEEEEEeC
Confidence 34556789999999999998899999999985433222 2456778877777 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+++|+|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++.+. .+++.|||.+....
T Consensus 93 ~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 93 IEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEECCCSSSTTC------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCC--CEEEEeCCCcccccccccc
Confidence 99999999996 3899999999999999999999 45899999999999998664 57899999875321
Q ss_pred --CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 --SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.... . .......... .. ..+......
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~----~~~~~~~~~~-~~-~~~~~~~~~ 240 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-S----IAIKHIQDSV-PN-VTTDVRKDI 240 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-H----HHHHHHSSCC-CC-HHHHSCTTS
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-H----HHHHHhhccC-CC-cchhcccCC
Confidence 2246899999999999999999999999999999999999999754211 1 1111111111 00 111111122
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHhhccC
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARP-CASDVTKTLESCFRIS 954 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RP-t~~~v~~~L~~~~~~~ 954 (966)
+ .++.+++.+|++.||++|| +++++.+.|++++...
T Consensus 241 ~------~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 241 P------QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp C------HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred C------HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 2 2466778899999999999 8999999999865544
No 80
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.4e-36 Score=326.58 Aligned_cols=246 Identities=26% Similarity=0.398 Sum_probs=189.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccc-------cchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITT-------SSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~-------~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
.....+|+|++|.||+|+...++..||||++........ +.+.+|+..+.+ ++|||||++++++.+.. ++
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~--~l 98 (287)
T 4f0f_A 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN-LNHPNIVKLYGLMHNPP--RM 98 (287)
T ss_dssp EEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTT-CCCTTBCCEEEEETTTT--EE
T ss_pred eehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHh-CCCCCchhhheeecCCC--eE
Confidence 345567999999999999988999999998864432221 457778887777 69999999999997665 79
Q ss_pred EEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC---ceEEEeccccce
Q 002105 759 VYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE---PHLRLSVPGLAY 831 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~---~~~~~~~~~~~~ 831 (966)
||||+++|+|.+++. .+++..+..++.|++.||+|||.. .++|+||||||+||+++.+.. ..++++|||.+.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 999999999999884 389999999999999999999944 223999999999999986442 347899999886
Q ss_pred ecC---CCCcCCccccccccc--CCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 832 CTD---SKSINSSAYVAPETK--ESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 832 ~~~---~~~~~~~~y~aPE~~--~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
... ....||+.|+|||++ ....++.++|||||||++|||+||+.||............... ... ..+
T Consensus 178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~~-----~~~ 249 (287)
T 4f0f_A 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR---EEG-----LRP 249 (287)
T ss_dssp CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH---HSC-----CCC
T ss_pred cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh---ccC-----CCC
Confidence 432 234689999999998 4556789999999999999999999999754322221111111 111 112
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
.+....+ .++.+++.+||+.||++|||++||+++|++
T Consensus 250 ~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 250 TIPEDCP------PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCcccC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 2222222 256678889999999999999999999986
No 81
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=344.77 Aligned_cols=243 Identities=19% Similarity=0.293 Sum_probs=193.6
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
+.....+|+|++|.||+|+...+|..||+|.+..........+.+|+..+.+ ++|||||++++++.+++..++||||++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ-LHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTT-CCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHh-CCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 3445567999999999999988999999998865544444567788887777 699999999999999999999999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS----- 835 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~----- 835 (966)
+|+|.+++. .+++.....++.||+.||+||| +.+|+||||||+||+++.+....++++|||++.....
T Consensus 132 gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 999999985 4789999999999999999999 4589999999999999876666789999999875432
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.+... .+.. ..+... ... .++......+
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~-~~i~~~----~~~--~~~~~~~~~s-- 278 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETL-QNVKRC----DWE--FDEDAFSSVS-- 278 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHH-HHHHHC----CCC--CCSSTTTTSC--
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHH-HHHHhC----CCC--CCccccccCC--
Confidence 23689999999999999999999999999999999999999975421 1111 111110 000 1111111122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 279 ----~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 279 ----PEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ----HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 24667888999999999999999975
No 82
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.5e-36 Score=335.08 Aligned_cols=249 Identities=13% Similarity=0.114 Sum_probs=195.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+...++..||||.+.... ..+.+..|+..+.++-+||||+++++++..++..++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence 44556799999999999998899999999876442 34568889888887439999999999999999999999999 9
Q ss_pred CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC---ceEEEeccccceecC----
Q 002105 766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE---PHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~---~~~~~~~~~~~~~~~---- 834 (966)
|+|.++++ .+++..+..++.|++.||+|||. .+|+||||||+||+++.+.. ..++++|||++....
T Consensus 89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 99999986 48999999999999999999994 58999999999999986543 238999999986421
Q ss_pred ---------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc--hhhHHHHHHHhhccCccccc
Q 002105 835 ---------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV--HESIVEWARYCYSDCHLDTW 903 (966)
Q Consensus 835 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 903 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...... .+....+....... .
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~-~---- 240 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT-P---- 240 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS-C----
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC-C----
Confidence 2346899999999999999999999999999999999999999764221 11111111110000 0
Q ss_pred ccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 904 VDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 904 ~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.+..... ..++.+++..||+.||.+||++++|.+.|++.++.
T Consensus 241 -~~~~~~~-------~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 241 -IEVLCEN-------FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp -HHHHTTT-------CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHhcc-------ChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0000000 11677788899999999999999999999986543
No 83
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.3e-36 Score=333.37 Aligned_cols=237 Identities=23% Similarity=0.283 Sum_probs=188.0
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
......+|+|++|.||+|+...+|+.||+|.+.... ......+.+|+..+.+ ++|||||++++++..++..|+|||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~l~~~~~~~~~~~lv~E 85 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVME 85 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHh-CCCCcCcceEEEEEeCCEEEEEEe
Confidence 344556799999999999998899999999986532 2223446777777776 699999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
|++||+|.+++. .+++.....++.||+.||+||| +.+|+||||||+|||++.++ +++++|||++...
T Consensus 86 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 86 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCCTTC
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCC--CEEEeeccchhhcccCCC
Confidence 999999999986 3899999999999999999999 45899999999999998654 6899999988642
Q ss_pred -CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 -DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+||+.|+|||++.+..++.++|||||||++|||+||+.||.... ...+.+.+. .. . +.+....
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~---~~-~------~~~p~~~ 228 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HERLFELIL---ME-E------IRFPRTL 228 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HC-C------CCCCTTS
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--HHHHHHHHH---cC-C------CCCCCCC
Confidence 223468999999999999999999999999999999999999997531 111111111 11 0 0111112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARP-----CASDVTK 945 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~~ 945 (966)
+ .++.+++.+|++.||++|| +++||++
T Consensus 229 s------~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 229 S------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp C------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C------HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 2 2456677899999999999 8888864
No 84
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=330.50 Aligned_cols=243 Identities=24% Similarity=0.407 Sum_probs=185.8
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||+++. .+..||||++... ...+.|.+|+..+.+ ++|||||+++|++.+ ..++||||+++|
T Consensus 12 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~--~~~lv~e~~~~~ 84 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE--SERKAFIVELRQLSR-VNHPNIVKLYGACLN--PVCLVMEYAEGG 84 (307)
T ss_dssp EEEEEECCSSSEEEEEEE--TTEEEEEEECSST--THHHHHHHHHHHHHH-CCCTTBCCEEEBCTT--TTEEEEECCTTC
T ss_pred eeeEeecCCCceEEEEEE--CCeeEEEEEecCh--hHHHHHHHHHHHHhc-CCCCCcCeEEEEEcC--CcEEEEEcCCCC
Confidence 344578999999999986 5788999987532 234568888888888 699999999999874 479999999999
Q ss_pred CHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---CCC
Q 002105 767 ELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---SKS 837 (966)
Q Consensus 767 ~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---~~~ 837 (966)
+|.++++. +++.....++.|+++||+|||+.+..+|+||||||+||+++.+. ..++++|||.+.... ...
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~~kl~Dfg~~~~~~~~~~~~ 163 (307)
T 2eva_A 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG-TVLKICDFGTACDIQTHMTNN 163 (307)
T ss_dssp BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT-TEEEECCCCC-----------
T ss_pred CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC-CEEEEcccccccccccccccC
Confidence 99999973 67899999999999999999965447999999999999998654 347899999875432 234
Q ss_pred cCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHH
Q 002105 838 INSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQN 917 (966)
Q Consensus 838 ~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 917 (966)
.||+.|+|||++.+..++.++|||||||++|||+||+.||.........+ .|... ... .+......+
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~--~~~------~~~~~~~~~---- 230 (307)
T 2eva_A 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI-MWAVH--NGT------RPPLIKNLP---- 230 (307)
T ss_dssp -CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH-HHHHH--TTC------CCCCBTTCC----
T ss_pred CCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH-HHHHh--cCC------CCCcccccC----
Confidence 68999999999999999999999999999999999999997542222211 12111 111 111111222
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 918 EIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 918 ~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.++.+++.+||+.||++|||++||++.|+.+.+
T Consensus 231 --~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 231 --KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp --HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred --HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 246678889999999999999999999998544
No 85
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.8e-36 Score=338.11 Aligned_cols=239 Identities=21% Similarity=0.303 Sum_probs=185.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
......+|+|++|.||+|+...++..||+|++..... ...+.+..|...+.+..+|||||++++++.+++..|+|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 4556678999999999999988999999999875422 2234467777777776689999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee------
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC------ 832 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~------ 832 (966)
||++|+|..+++ .+++..+..++.||+.||+||| +.+||||||||+|||++.++ +++++|||++..
T Consensus 134 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g--~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 134 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTC
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCC--CEEEeecceeeecccCCC
Confidence 999999999986 4899999999999999999999 45899999999999999654 589999999864
Q ss_pred cCCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch---hhHHHHHHHhhccCccccccccccc
Q 002105 833 TDSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVH---ESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 833 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
.....+||+.|+|||++.+..|+.++|||||||++|||+||+.||....... ....++......... +.+.
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------~~~p 282 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------IRIP 282 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC------CCCC
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc------cCCC
Confidence 1234578999999999999999999999999999999999999996431110 000011111111111 1111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCA 940 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 940 (966)
...+ .++.+++.+|++.||++||++
T Consensus 283 ~~~s------~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 283 RSLS------VKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TTSC------HHHHHHHHHHTCSCTTTSTTC
T ss_pred CcCC------HHHHHHHHHHhcCCHhHcCCC
Confidence 1122 245677889999999999996
No 86
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.4e-36 Score=332.66 Aligned_cols=249 Identities=18% Similarity=0.253 Sum_probs=189.6
Q ss_pred cccccCCCCCccEEEEEE----EecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecC--CeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVR----SLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE--KAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~----~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~--~~~~lv 759 (966)
.....+|+|++|.||+++ ...++..||||++........+.+.+|+..+.+ ++|||||+++++|... ...++|
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv 91 (295)
T 3ugc_A 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLI 91 (295)
T ss_dssp EEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECHHHHTSCEEE
T ss_pred hhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCCCceEEE
Confidence 445567999999999998 456788999999875544445568888888888 6999999999999653 568999
Q ss_pred EEccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 760 YEYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+ ..++++|||.+....
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 92 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEET--TEEEECCCCSCC----
T ss_pred EEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCC--CeEEEccCcccccccC
Confidence 999999999999963 899999999999999999999 4599999999999999865 467899999886421
Q ss_pred --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc----------hhhHHHHHHHhhc
Q 002105 835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV----------HESIVEWARYCYS 896 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~----------~~~~~~~~~~~~~ 896 (966)
....+++.|+|||.+.+..++.++|||||||++|||+||..|+...... .............
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 1234566799999999899999999999999999999999997532100 0000001111111
Q ss_pred cCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 897 DCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 897 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
... .+.....+ ..++.+++.+||+.||++|||++||+++|+++.
T Consensus 247 ~~~-----~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 247 NNG-----RLPRPDGC------PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp TTC-----CCCCCTTC------CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC-----cCCCCcCc------CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 000 00011112 135677888999999999999999999999843
No 87
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-36 Score=343.32 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=191.0
Q ss_pred cccccCCCCCccEEEEEEE-----ecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCC-eeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRS-----LANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK-AAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~-----~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~-~~~l 758 (966)
.....+|+|++|.||+|+. ..+++.||||++..... ...+.+.+|+..+.++-+|||||+++++|.+++ ..++
T Consensus 25 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~i 104 (359)
T 3vhe_A 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104 (359)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEE
T ss_pred eeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEE
Confidence 4455679999999999984 45668999999865432 223458889988888558999999999998755 4899
Q ss_pred EEEccCCCCHHHHHHc----------------------------------------------------------------
Q 002105 759 VYEYIEGKELSEVLRN---------------------------------------------------------------- 774 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~---------------------------------------------------------------- 774 (966)
||||+++|+|.++++.
T Consensus 105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (359)
T 3vhe_A 105 IVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPED 184 (359)
T ss_dssp EEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------C
T ss_pred EEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccc
Confidence 9999999999999963
Q ss_pred -----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--------CCCCcCCc
Q 002105 775 -----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--------DSKSINSS 841 (966)
Q Consensus 775 -----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 841 (966)
+++..+..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+... .....+|+
T Consensus 185 ~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 185 LYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp TTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCC--cEEEEeccceeeecccccchhccccCCCc
Confidence 788899999999999999999 45899999999999998654 5789999988642 12345688
Q ss_pred ccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHHHH
Q 002105 842 AYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIV 920 (966)
Q Consensus 842 ~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 920 (966)
.|+|||++.+..++.++|||||||++|||+| |+.||.+..... .+...... ... +......+ .
T Consensus 260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~---~~~------~~~~~~~~------~ 323 (359)
T 3vhe_A 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKE---GTR------MRAPDYTT------P 323 (359)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHH---TCC------CCCCTTCC------H
T ss_pred eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHc---CCC------CCCCCCCC------H
Confidence 8999999999999999999999999999999 999997643222 12121111 100 01111121 2
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 921 EIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 921 ~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
++.+++..||+.||++||||+||++.|++++.
T Consensus 324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 46678889999999999999999999998543
No 88
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.9e-36 Score=339.52 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=189.9
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||++....+|..||+|++..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+||||+
T Consensus 32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~lv~e~~ 110 (362)
T 2bdw_A 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK-LQHPNIVRLHDSIQEESFHYLVFDLV 110 (362)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 444567899999999999988999999999865432 223456778877777 69999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC-ceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE-PHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~-~~~~~~~~~~~~~~~----- 834 (966)
++|+|.+++. .+++.....++.||++||+|||. .+|+||||||+||+++.+.. ..++++|||++....
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~ 187 (362)
T 2bdw_A 111 TGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187 (362)
T ss_dssp CSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence 9999999986 37899999999999999999994 58999999999999986543 568999999986532
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.... ...+...+... ... +..+.. ...+
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--~~~~~~~i~~~----~~~-~~~~~~-~~~~- 258 (362)
T 2bdw_A 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAG----AYD-YPSPEW-DTVT- 258 (362)
T ss_dssp CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT----CCC-CCTTGG-GGSC-
T ss_pred ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhC----CCC-CCcccc-cCCC-
Confidence 23478999999999999999999999999999999999999987532 11111211111 000 011110 1111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 259 -----~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 259 -----PEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 24667888999999999999999864
No 89
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.6e-36 Score=343.38 Aligned_cols=237 Identities=22% Similarity=0.323 Sum_probs=183.3
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEccCC
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEYIEG 765 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey~~~ 765 (966)
.+|.|++|.||+++...++..||||++.. ...+.+|+..+.+..+|||||+++++|.. ++..|+|||||+|
T Consensus 69 ~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 69 VLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred eeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 46899999999999988999999999853 23567788877777799999999999875 5678999999999
Q ss_pred CCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecC-----
Q 002105 766 KELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 766 g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~----- 834 (966)
|+|.++++. +++..+..++.||+.||+|||. .+|+||||||+|||++.+. ...++++|||++....
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~ 220 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence 999999963 8999999999999999999994 5899999999999998632 4668999999986532
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch--hhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVH--ESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
...+||+.|+|||++.+..|+.++|||||||++|||+||+.||....... ......+... ... ...+. ....
T Consensus 221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~----~~~-~~~~~-~~~~ 294 (400)
T 1nxk_A 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG----QYE-FPNPE-WSEV 294 (400)
T ss_dssp ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT----CCC-CCTTT-TTTS
T ss_pred ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC----ccc-CCCcc-cccC
Confidence 23468999999999999999999999999999999999999997643221 1111111110 000 01110 0111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
+ .++.+++.+||+.||++|||+.||++.
T Consensus 295 s------~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 295 S------EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp C------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 246678889999999999999999863
No 90
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4e-36 Score=324.39 Aligned_cols=240 Identities=20% Similarity=0.345 Sum_probs=191.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+++. .++..||+|++.... ...+++.+|+..+.+ ++|||||++++++.+++..++||||+++
T Consensus 13 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGA-MSEEDFIEEAEVMMK-LSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp EEEEEEEECSSCEEEEEEE-TTTEEEEEEEECTTS-BCHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred eeeheecCCCccEEEEEEe-cCCCeEEEEEecccc-cCHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 3445678999999999998 578889999886432 334568888888888 6999999999999999999999999999
Q ss_pred CCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-------C
Q 002105 766 KELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-------D 834 (966)
Q Consensus 766 g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-------~ 834 (966)
|+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||+++.+ ..+++.|||.+... .
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGG--GCEEECCTTGGGGBCCHHHHST
T ss_pred CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCC--CCEEeccccccccccccccccc
Confidence 999999963 899999999999999999999 4589999999999999865 45789999987532 2
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....+|+.|+|||.+.+..++.++||||+||++|||+| |+.||.... .....+... ... .+......+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--~~~~~~~~~---~~~------~~~~~~~~~ 233 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDIS---TGF------RLYKPRLAS 233 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHH---TTC------CCCCCTTSC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--HHHHHHHHh---cCc------cCCCCCcCC
Confidence 23456778999999998899999999999999999999 999987532 111111111 110 111111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESC 950 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~ 950 (966)
.++.+++.+|++.||++|||++|+++.|+++
T Consensus 234 ------~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 234 ------THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 2466788899999999999999999999983
No 91
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.7e-36 Score=337.16 Aligned_cols=244 Identities=19% Similarity=0.267 Sum_probs=185.3
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
+.....+|+|++|.||+++...++..||||++.... ...+.+.+|+..+.+ ++|||||++++++.+++..++||||++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRS-LRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHh-CCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 445566899999999999998899999999986533 233557788877777 799999999999999999999999999
Q ss_pred CCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----CCC
Q 002105 765 GKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-----DSK 836 (966)
Q Consensus 765 ~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-----~~~ 836 (966)
+|+|.+++. .+++.....++.|+++||+||| +.+|+||||||+||+++.+...+++++|||++... ...
T Consensus 100 ~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 176 (361)
T 3uc3_A 100 GGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 176 (361)
T ss_dssp SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCC
Confidence 999999985 4899999999999999999999 45899999999999999877777999999987532 233
Q ss_pred CcCCcccccccccCCCCCCCc-chHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 837 SINSSAYVAPETKESKDITEK-GDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~-~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
..||+.|+|||++.+..++.+ +|||||||++|||+||+.||....... ...+......... .. ..+ ....+
T Consensus 177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~-~~--~~~--~~~~s-- 248 (361)
T 3uc3_A 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVK-YS--IPD--DIRIS-- 248 (361)
T ss_dssp ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTC-CC--CCT--TSCCC--
T ss_pred CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCC-CC--CCC--cCCCC--
Confidence 568999999999988887665 899999999999999999997542211 1112222111110 00 000 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 249 ----~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 249 ----PECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp ----HHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ----HHHHHHHHHHccCChhHCcCHHHHHh
Confidence 24667888999999999999999975
No 92
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-36 Score=327.60 Aligned_cols=243 Identities=21% Similarity=0.324 Sum_probs=185.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecC--CeeEEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE--KAAYLVYE 761 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~--~~~~lv~E 761 (966)
.....+|+|++|.||+|+. .+..||||++.... ....+.|.+|+..+.+ ++|||||++++++.++ +..++|||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 13 NFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRI-FSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp EEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCC-CSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHh-cCCCchhheEEEEccCCCCCeEeeec
Confidence 3445678999999999997 48899999986542 2223457778777776 6999999999999887 78899999
Q ss_pred ccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCCC
Q 002105 762 YIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDSK 836 (966)
Q Consensus 762 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~~ 836 (966)
|+++|+|.++++. +++..+..++.|+++||+|||.. .++|+||||||+||+++.+...+++..+++.+. ....
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~-~~~~ 167 (271)
T 3kmu_A 90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSF-QSPG 167 (271)
T ss_dssp CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT-SCTT
T ss_pred ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeee-cccC
Confidence 9999999999973 79999999999999999999954 233999999999999998766555544444432 2334
Q ss_pred CcCCcccccccccCCCCCCC---cchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 837 SINSSAYVAPETKESKDITE---KGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~---~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
..+|+.|+|||.+.+..++. ++|||||||++|||+||+.||..... .+.. ....... ..+.+....+
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~----~~~~~~~-----~~~~~~~~~~ 237 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-MEIG----MKVALEG-----LRPTIPPGIS 237 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-HHHH----HHHHHSC-----CCCCCCTTCC
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-HHHH----HHHHhcC-----CCCCCCCCCC
Confidence 57899999999988766554 79999999999999999999875321 1111 1111111 1111222222
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
.++.+++..||+.||++|||++||++.|++
T Consensus 238 ------~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 238 ------PHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 246677889999999999999999999998
No 93
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=345.66 Aligned_cols=242 Identities=21% Similarity=0.268 Sum_probs=188.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|+||.||++....+|..+|+|++..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+|||||
T Consensus 14 ~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~lv~E~~ 92 (444)
T 3soa_A 14 QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL-LKHPNIVRLHDSISEEGHHYLIFDLV 92 (444)
T ss_dssp EEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHH-CCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCcCCCeEEEEEEECCEEEEEEEeC
Confidence 345567899999999999989999999999865432 223456778877777 69999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-CCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK-DEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~-~~~~~~~~~~~~~~~~~----- 834 (966)
++|+|.+++. .+++.....++.||+.||+||| +.+|+||||||+|||++.+ ....++++|||++....
T Consensus 93 ~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~ 169 (444)
T 3soa_A 93 TGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169 (444)
T ss_dssp BCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence 9999999885 4899999999999999999999 4589999999999999864 34568999999985432
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||++.+..|+.++||||+||++|||++|+.||.... ...+.+.+... ... +..+.. ...+
T Consensus 170 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~~----~~~-~~~~~~-~~~s 241 (444)
T 3soa_A 170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKAG----AYD-FPSPEW-DTVT 241 (444)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHT----CCC-CCTTTT-TTSC
T ss_pred eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHhC----CCC-CCcccc-ccCC
Confidence 23478999999999999999999999999999999999999997542 11111211111 100 011111 1111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 242 ------~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 242 ------PEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ------HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ------HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 24667788999999999999999875
No 94
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-36 Score=336.23 Aligned_cols=244 Identities=17% Similarity=0.270 Sum_probs=184.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEE----EEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQF----VVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~v----avk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
+.....+|+|++|.||+|+...++..+ |+|++.... ....++|.+|+..+.+ ++|||||+++++|.+++ .++|
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~-~~~v 94 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHH-CCBTTBCCEEEEEESSS-EEEE
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCC-eEEE
Confidence 445566799999999999987777654 666654332 2334567888888877 69999999999998755 7899
Q ss_pred EEccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 760 YEYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|||+++|+|.++++. +++..+..++.||++||+|||. .+|+||||||+||+++.+. .++++|||++....
T Consensus 95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETT--EEEECCTTHHHHHTT
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCC--CEEEccCcceeEccC
Confidence 999999999999963 8999999999999999999994 5899999999999998654 68999999875421
Q ss_pred -------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 835 -------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 835 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+.+.... .... .
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~---~~~~---~-- 239 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK---GERL---P-- 239 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHT---TCCC---C--
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHc---CCCC---C--
Confidence 12345778999999999999999999999999999999 9999975422 222222211 1100 0
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
..... ..++.+++.+||+.||++||+|+||++.|+++.+
T Consensus 240 -~~~~~------~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 240 -QPPIC------TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCTTB------CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -CCccC------CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01111 1356778899999999999999999999998554
No 95
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.6e-36 Score=334.69 Aligned_cols=240 Identities=20% Similarity=0.346 Sum_probs=187.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc-cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI-TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~-~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...++..||||++...... ..+.+.+|+..+.+ ++|||||++++++.+++..|+||||++
T Consensus 10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 3455679999999999999889999999998644322 23567777777766 799999999999999999999999999
Q ss_pred CCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--------
Q 002105 765 GKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-------- 833 (966)
Q Consensus 765 ~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-------- 833 (966)
+|+|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+...
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCCTTCEECEETTEECC
T ss_pred CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCC--CEEEEEeeccceeccCCcccc
Confidence 999999986 4899999999999999999999 45899999999999999654 5789999988532
Q ss_pred CCCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 DSKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
.....||+.|+|||++.+..+ +.++|||||||++|||+||+.||............|... ... .++. ...
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~---~~~----~~~~--~~~ 234 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KTY----LNPW--KKI 234 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT---CTT----STTG--GGS
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc---ccc----CCcc--ccC
Confidence 124578999999999887775 779999999999999999999997643322222222211 000 1110 011
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
. .++.+++.+|++.||++|||+.|+++.
T Consensus 235 ---~---~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 ---D---SAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---C---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---C---HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1 245678889999999999999999753
No 96
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4e-36 Score=335.30 Aligned_cols=237 Identities=19% Similarity=0.303 Sum_probs=188.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
......+|+|++|.||+|+...+|+.||+|++.... ....+.+..|...+.+..+|||||++++++.+++..|+|||
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E 98 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 98 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 344556789999999999998899999999986532 12233466777777765599999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
|++||+|.++++ .+++..+..++.||+.||+|||. .+|+||||||+||+++.++ +++++|||++...
T Consensus 99 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 99 YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDA 173 (345)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTC
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCC--CEEEeEChhhhhcccCCC
Confidence 999999999996 48999999999999999999994 5899999999999998654 6899999987642
Q ss_pred -CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 -DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+||+.|+|||++.+..++.++|||||||++|||+||+.||.+.. ...+.+.+.. . .+......
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~---~-------~~~~p~~~ 241 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIRM---D-------NPFYPRWL 241 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH---C-------CCCCCTTS
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHh---C-------CCCCCccc
Confidence 234578999999999999999999999999999999999999997542 1212121111 1 11111112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCAS-DVT 944 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~-~v~ 944 (966)
+ .++.+++.+|++.||++||++. ||.
T Consensus 242 s------~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 E------KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp C------HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C------HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 2 2456778899999999999997 654
No 97
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.1e-36 Score=330.50 Aligned_cols=244 Identities=20% Similarity=0.276 Sum_probs=187.0
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCHH
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKELS 769 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~ 769 (966)
.+|+|++|.||+|+...++..||||++........+.+.+|+..+.++.+|||||++++++.+++..|+||||+++|+|.
T Consensus 20 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 99 (316)
T 2ac3_A 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99 (316)
T ss_dssp CCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHH
Confidence 46999999999999988999999999876554445668889988888668999999999999999999999999999999
Q ss_pred HHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC-ceEEEeccccceecC-----------
Q 002105 770 EVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE-PHLRLSVPGLAYCTD----------- 834 (966)
Q Consensus 770 ~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~-~~~~~~~~~~~~~~~----------- 834 (966)
+++. .+++..+..++.||++||+|||. .+|+||||||+||+++.+.. ..++++|||++....
T Consensus 100 ~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 176 (316)
T 2ac3_A 100 SHIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176 (316)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------------
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccc
Confidence 9996 38999999999999999999994 58999999999999987543 347899999875321
Q ss_pred --CCCcCCcccccccccCC-----CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch------h---h-HHHHHHHhhcc
Q 002105 835 --SKSINSSAYVAPETKES-----KDITEKGDIYGFGLILIDLLTGKSPADADFGVH------E---S-IVEWARYCYSD 897 (966)
Q Consensus 835 --~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~------~---~-~~~~~~~~~~~ 897 (966)
....||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... + . ....... ...
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~ 255 (316)
T 2ac3_A 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES-IQE 255 (316)
T ss_dssp -----CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHH-HHH
T ss_pred ccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHH-Hhc
Confidence 12358999999999864 568899999999999999999999997643211 0 0 0000111 000
Q ss_pred CcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 898 CHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 898 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.... +.++ ..... ..++.+++.+|++.||++|||++|+++
T Consensus 256 ~~~~-~~~~-~~~~~------~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 256 GKYE-FPDK-DWAHI------SCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCCC-CCHH-HHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCcc-cCch-hcccC------CHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1000 0000 00111 135677888999999999999999976
No 98
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=329.95 Aligned_cols=235 Identities=20% Similarity=0.274 Sum_probs=183.7
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
+.....+|+|++|.||+|+...+|..||||++..... .....+..|+..+.+..+|||||+++++|.+++..++||||
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~ 138 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL 138 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEec
Confidence 3445567999999999999988999999998754322 22334567777777766999999999999999999999999
Q ss_pred cCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 763 IEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
+ +|+|.+++.. ++|..+..++.|++.||+|||. .+|+||||||+|||++.+. .++++|||++....
T Consensus 139 ~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~--~~kl~DFG~a~~~~~~~~ 212 (311)
T 3p1a_A 139 C-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTAGA 212 (311)
T ss_dssp C-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGG--CEEECCCTTCEECC----
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCC--CEEEccceeeeecccCCC
Confidence 9 6799998863 9999999999999999999994 5899999999999998654 57899999876532
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||++|+|||++.+ .++.++|||||||++|||++|..|+... . .|... .... ..+......+
T Consensus 213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~---~~~~~--~~~~----~~~~~~~~~~ 278 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----E---GWQQL--RQGY----LPPEFTAGLS 278 (311)
T ss_dssp --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----H---HHHHH--TTTC----CCHHHHTTSC
T ss_pred CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----c---HHHHH--hccC----CCcccccCCC
Confidence 23468999999998876 7899999999999999999997775431 1 11111 1111 1111111222
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 279 ------~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 279 ------SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ------HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 35667888999999999999999986
No 99
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.4e-36 Score=348.17 Aligned_cols=240 Identities=17% Similarity=0.333 Sum_probs=190.8
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|+||.||+|+. .++..||||++.... ...++|.+|+..+.+ ++|||||++++++. ++..|+|||||++|
T Consensus 192 ~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~h~~iv~l~~~~~-~~~~~lv~e~~~~g 267 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGS-MSVEAFLAEANVMKT-LQHDKLVKLHAVVT-KEPIYIITEFMAKG 267 (454)
T ss_dssp EEEEEECCSSEEEEEEEE-TTTEEEEEEEECTTS-BCHHHHHHHHHHHTT-CCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred EEEEcccCCceEEEEEEE-CCccEEEEEEecCCC-ccHHHHHHHHHHHhh-CCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence 344579999999999997 667889999986533 345678888888877 69999999999987 56789999999999
Q ss_pred CHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105 767 ELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------- 834 (966)
Q Consensus 767 ~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------- 834 (966)
+|.++++ .+++..+.+++.|||.||+|||. .+|+||||||+|||++.+. .++++|||++....
T Consensus 268 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~--~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL--VCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp BHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTC--CEEECSTTGGGGBCCHHHHTT
T ss_pred cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCC--cEEEeeCCCceEcCCCceecc
Confidence 9999996 48899999999999999999994 5899999999999999654 57899999986422
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....+++.|+|||++....++.++|||||||++|||+| |+.||.+.. ...+.+.+.. .... .. ...++
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~---~~~~---~~---~~~~~ 411 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALER---GYRM---PR---PENCP 411 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHH---TCCC---CC---CTTSC
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc---CCCC---CC---CCCCC
Confidence 23345778999999998899999999999999999999 999987532 1222122211 1111 01 11122
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.++.+++.+||+.||++||||++|+++|++...
T Consensus 412 ------~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 412 ------EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 356778899999999999999999999999544
No 100
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.3e-36 Score=335.91 Aligned_cols=240 Identities=19% Similarity=0.310 Sum_probs=178.2
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||+|+...+++.||||++.... ..+.+.+|+..+.+ ++|||||+++++|..++..++||||+++|
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 133 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLR-LSHPNIIKLKEIFETPTEISLVLELVTGG 133 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHh-CCCCCCcceeeeEecCCeEEEEEEeCCCC
Confidence 3445789999999999998889999999986542 34557778888877 69999999999999999999999999999
Q ss_pred CHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecC-----CCC
Q 002105 767 ELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTD-----SKS 837 (966)
Q Consensus 767 ~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~-----~~~ 837 (966)
+|.+++.. +++.++..++.|+++||+|||. .+|+||||||+||+++. +....++++|||++.... ...
T Consensus 134 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 210 (349)
T 2w4o_A 134 ELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV 210 (349)
T ss_dssp BHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccc
Confidence 99999963 7999999999999999999994 58999999999999975 334668999999876432 234
Q ss_pred cCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHH
Q 002105 838 INSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQN 917 (966)
Q Consensus 838 ~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 917 (966)
.||+.|+|||++.+..++.++|||||||++|||+||+.||.......... +.. .. ... ....+.. ...+
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~i---~~-~~~-~~~~~~~-~~~~---- 279 (349)
T 2w4o_A 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-RRI---LN-CEY-YFISPWW-DEVS---- 279 (349)
T ss_dssp --CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH-HHH---HT-TCC-CCCTTTT-TTSC----
T ss_pred cCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH-HHH---Hh-CCC-ccCCchh-hhCC----
Confidence 68999999999999999999999999999999999999997543222111 111 11 111 0011111 1111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 918 EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 918 ~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 280 --~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 280 --LNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 25667888999999999999999875
No 101
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=326.90 Aligned_cols=258 Identities=15% Similarity=0.144 Sum_probs=193.2
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCC--eeEEEEEcc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK--AAYLVYEYI 763 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~--~~~lv~Ey~ 763 (966)
....+|+|++|.||+|+...++..||||++..... ...+.+.+|+..+.+ ++|||||++++++...+ ..++||||+
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK-LNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHH-CCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 34457899999999999988899999999865432 223456778877777 69999999999998755 789999999
Q ss_pred CCCCHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEE--cCCCCceEEEeccccceecC-
Q 002105 764 EGKELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIV--DGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 764 ~~g~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill--~~~~~~~~~~~~~~~~~~~~- 834 (966)
++|+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||++ +.+....++++|||.+....
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 99999999974 899999999999999999999 4589999999999998 12244568999999986532
Q ss_pred ----CCCcCCcccccccccC--------CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch---hhHHHHHHHhhccCc
Q 002105 835 ----SKSINSSAYVAPETKE--------SKDITEKGDIYGFGLILIDLLTGKSPADADFGVH---ESIVEWARYCYSDCH 899 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~--------~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~ 899 (966)
....||+.|+|||++. +..++.++|||||||++|||+||+.||....... +.+........ ...
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p-~~~ 247 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP-SGA 247 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC-TTC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC-ccc
Confidence 2346899999999875 5788999999999999999999999997533221 11212111111 000
Q ss_pred cccc---------ccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 900 LDTW---------VDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 900 ~~~~---------~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
...+ .++.+.............+.+++.+|++.||++|||++|+++...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 0000 0001111111113344556788899999999999999999998877
No 102
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=337.79 Aligned_cols=252 Identities=15% Similarity=0.190 Sum_probs=185.6
Q ss_pred ccccccCCCCCccEEEEEEEec---CCcEEEEEEEeccCcc-----------cccchHHHHHHHHhhcCCCceeEEeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLA---NDMQFVVKKIIDVNTI-----------TTSSFWPDVSQFGKLIMHPNIVRLHGVC 750 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~---~~~~vavk~~~~~~~~-----------~~~~~~~e~~~~~~~~~H~niv~l~g~~ 750 (966)
+.....+|+|++|.||+|+... ++..+|||+....... ....+.+|+..+.+ ++|||||++++++
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~-l~h~ni~~~~~~~ 117 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ-LDYLGIPLFYGSG 117 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHT-CSCCCCCCEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcc-ccccCcceeeccc
Confidence 3445567999999999999866 7789999988654321 12234555555555 6999999999999
Q ss_pred ec----CCeeEEEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEE
Q 002105 751 RS----EKAAYLVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLR 823 (966)
Q Consensus 751 ~~----~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~ 823 (966)
.. ++..|+||||+ +|+|.++++ .+++.++..++.||+.||+||| +.+|+||||||+||+++.+....++
T Consensus 118 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 118 LTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSEE
T ss_pred ccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcEE
Confidence 87 77899999999 999999986 4899999999999999999999 4599999999999999977656789
Q ss_pred EeccccceecC-------------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHH
Q 002105 824 LSVPGLAYCTD-------------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEW 890 (966)
Q Consensus 824 ~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~ 890 (966)
++|||++.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.............
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 99999985421 23468999999999999999999999999999999999999996533222222111
Q ss_pred HHHhhccCccccccccccc-CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 891 ARYCYSDCHLDTWVDPFIR-GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
....... ....+..... ...+ .++.+++.+||+.||++||++++|++.|++
T Consensus 274 ~~~~~~~--~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 274 KTNLLDE--LPQSVLKWAPSGSSC------CEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHT--TTHHHHHHSCTTSCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHhhccc--ccHHHHhhccccccH------HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1111110 0000000000 0111 256677889999999999999999999998
No 103
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.8e-36 Score=322.90 Aligned_cols=242 Identities=22% Similarity=0.341 Sum_probs=191.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+++. .++..||+|++.... ...+++.+|+..+.+ ++|||||++++++..++..++||||+++
T Consensus 11 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 11 TLLKELGSGQFGVVKLGKW-KGQYDVAVKMIKEGS-MSEDEFFQEAQTMMK-LSHPKLVKFYGVCSKEYPIYIVTEYISN 87 (268)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTTEEEEEEEECBTT-BCHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred eeeeeeccCCCceEEEEEe-cCceeEEEEEeccCC-CcHHHHHHHHHHHHh-CCCCCEeeEEEEEccCCceEEEEEccCC
Confidence 3455678999999999987 677789999886433 334568888888888 6999999999999999999999999999
Q ss_pred CCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105 766 KELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------- 834 (966)
Q Consensus 766 g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------- 834 (966)
|+|.++++. +++..+..++.|++.||+||| ..+|+||||||+||+++.+. .++++|||.+....
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDL--CVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTC--CEEECCTTCEEECCTTCEEEC
T ss_pred CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCC--CEEEccCccceecchhhhhcc
Confidence 999999863 899999999999999999999 45899999999999998654 57899999876432
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+.. ... ...... ..| ...+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~-~~~---~~~~~~---~~~---~~~~ 231 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SEVV-LKV---SQGHRL---YRP---HLAS 231 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHH-HHH---HTTCCC---CCC---TTSC
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-HHHH-HHH---HcCCCC---CCC---CcCh
Confidence 22345678999999998889999999999999999999 9999865321 1111 111 111100 111 1111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.++.+++..|++.||++|||++|+++.|++ ++.
T Consensus 232 ------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~-l~~ 264 (268)
T 3sxs_A 232 ------DTIYQIMYSCWHELPEKRPTFQQLLSSIEP-LRE 264 (268)
T ss_dssp ------HHHHHHHHHTTCSSGGGSCCHHHHHHHHGG-GCC
T ss_pred ------HHHHHHHHHHcCCChhhCcCHHHHHHHHHH-hhh
Confidence 246678889999999999999999999998 554
No 104
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.3e-36 Score=353.35 Aligned_cols=244 Identities=20% Similarity=0.328 Sum_probs=194.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|+||.||+|+...++..||||++... ....++|.+|+..+.+ ++|||||+++|+|..++..|+|||||++
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHh-cCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 3345678999999999999777999999987543 2345678888888877 6999999999999999999999999999
Q ss_pred CCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105 766 KELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 766 g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------ 834 (966)
|+|.++++. +++..+..++.||++||+||| +.+|+||||||+|||++.+ ..++++|||++....
T Consensus 301 g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGEN--HLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGG--GCEEECCTTCEECCTTCCEEC
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCC--CcEEEeecccceeccCCceee
Confidence 999999963 789999999999999999999 4589999999999999865 457899999986432
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+++.|+|||++....++.++|||||||++|||+| |+.||.+.. ...+.+.+.... .. .....+
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~---~~------~~~~~~ 444 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDY---RM------ERPEGC 444 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTC---CC------CCCTTC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC---CC------CCCCCC
Confidence 12345678999999998899999999999999999999 999987532 222223222111 10 111112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ .++.+++.+||+.||++||||.||+++|+.++..
T Consensus 445 ~------~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 445 P------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred C------HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 2 3566788899999999999999999999985443
No 105
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=337.91 Aligned_cols=245 Identities=20% Similarity=0.301 Sum_probs=191.8
Q ss_pred ccccCCCCCccEEEEEEEecC-------CcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLAN-------DMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~-------~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
....+|+|++|.||+|+.... +..||||++..... ...+.+.+|++.+.++.+|||||+++++|..++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 344578999999999997532 35799998865422 2235578888888884499999999999999999999
Q ss_pred EEEccCCCCHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC
Q 002105 759 VYEYIEGKELSEVLRN-------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE 819 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~ 819 (966)
||||+++|+|.++++. +++..+..++.||+.||+||| +.+|+||||||+||+++.+.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~- 228 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDN- 228 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTC-
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEcCCC-
Confidence 9999999999999963 789999999999999999999 45899999999999999664
Q ss_pred ceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002105 820 PHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEW 890 (966)
Q Consensus 820 ~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~ 890 (966)
.++++|||++.... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+.+.
T Consensus 229 -~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~--~~~~~~~ 305 (382)
T 3tt0_A 229 -VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--VEELFKL 305 (382)
T ss_dssp -CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHH
T ss_pred -cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHH
Confidence 57899999886422 22346778999999999999999999999999999999 999986531 2222222
Q ss_pred HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+. .... +......+ .++.+++.+||+.||++|||++||++.|++++..
T Consensus 306 ~~---~~~~------~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 306 LK---EGHR------MDKPSNCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp HH---TTCC------CCCCSSCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH---cCCC------CCCCccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 21 1111 11111122 2566788899999999999999999999986543
No 106
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=337.35 Aligned_cols=234 Identities=19% Similarity=0.250 Sum_probs=183.2
Q ss_pred cccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 684 TEENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 684 ~~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
++.....+|+|++|.||+|+...+|..||||++.... ....+.+..|...+.+..+|||||++++++.+++..|+||
T Consensus 24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~ 103 (353)
T 3txo_A 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM 103 (353)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence 3455667899999999999998899999999986532 1223345677777766447999999999999999999999
Q ss_pred EccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----
Q 002105 761 EYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---- 833 (966)
Q Consensus 761 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---- 833 (966)
|||+||+|.++++ .+++.....++.||+.||+|||. .+|+||||||+|||++.++ +++++|||++...
T Consensus 104 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g--~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 104 EFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNG 178 (353)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCC--
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCC--CEEEccccceeecccCC
Confidence 9999999999986 48999999999999999999994 5899999999999998654 5899999987642
Q ss_pred --CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCC
Q 002105 834 --DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGH 911 (966)
Q Consensus 834 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 911 (966)
....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ...+.+.+ .... +.....
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i---~~~~-------~~~p~~ 246 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--EDDLFEAI---LNDE-------VVYPTW 246 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHCC-------CCCCTT
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--HHHHHHHH---HcCC-------CCCCCC
Confidence 223578999999999998899999999999999999999999997542 11111111 1110 001111
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002105 912 VSSIQNEIVEIMNLALHCTAGDPTARPCA 940 (966)
Q Consensus 912 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 940 (966)
.+ .++.+++.+|++.||++||++
T Consensus 247 ~~------~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 247 LH------EDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp SC------HHHHHHHHHHTCSSGGGSTTS
T ss_pred CC------HHHHHHHHHHhhhCHHHccCC
Confidence 11 245667889999999999998
No 107
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.9e-36 Score=324.15 Aligned_cols=244 Identities=16% Similarity=0.283 Sum_probs=190.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
......+|+|++|.||++.. .++..||+|++.... ...+++.+|+..+.+ ++|||||++++++.+++..++||||++
T Consensus 26 y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 26 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGS-MSEDEFIEEAKVMMN-LSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp EEEEEECC---CEEEEEEEE-TTTEEEEEEEECTTS-BCHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHhHhhcCCCCCceEEEEEE-cCCCeEEEEEecCCC-CCHHHHHHHHHHHhc-CCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 34456789999999999987 677789999886432 334568888888887 699999999999999999999999999
Q ss_pred CCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-------
Q 002105 765 GKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------- 833 (966)
Q Consensus 765 ~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------- 833 (966)
+|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+. .+++.|||.+...
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTS--CEEECSTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCC--CEEEcccccccccccccccc
Confidence 9999999963 899999999999999999999 45899999999999998654 5789999987542
Q ss_pred CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
.....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... .....+... ... .+......
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~---~~~------~~~~~~~~ 246 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NSETAEHIA---QGL------RLYRPHLA 246 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHH---TTC------CCCCCTTC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--hhHHHHHHh---ccc------CCCCCCcC
Confidence 223456788999999998889999999999999999999 999987532 111111111 110 11111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ .++.+++.+||+.||++|||++|+++.|++.+..
T Consensus 247 ~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 247 S------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp C------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1 2566788899999999999999999999985543
No 108
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.8e-36 Score=331.67 Aligned_cols=241 Identities=22% Similarity=0.284 Sum_probs=170.3
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCHH
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKELS 769 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~ 769 (966)
.+|+|++|.||+++...++..||||++... ....+.+|+..+.++-.|||||++++++.+++..|+||||+++|+|.
T Consensus 18 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 478999999999999889999999998543 23456678877777434999999999999999999999999999999
Q ss_pred HHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecC------CCCcC
Q 002105 770 EVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTD------SKSIN 839 (966)
Q Consensus 770 ~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~------~~~~~ 839 (966)
++++. +++.++..++.|++.||+||| +.+|+||||||+||+++.+. ...++++|||++.... ....|
T Consensus 95 ~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 171 (325)
T 3kn6_A 95 ERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF 171 (325)
T ss_dssp HHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCC
Confidence 99963 899999999999999999999 45899999999999997643 3468999999986432 23467
Q ss_pred CcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc--hhhHHHHHHHhhccCcccccccccccCCCcchHH
Q 002105 840 SSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV--HESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQN 917 (966)
Q Consensus 840 ~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 917 (966)
|+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+....... .... .++... ..
T Consensus 172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~~~--~~~~~~------~~ 242 (325)
T 3kn6_A 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-GDFS--FEGEAW------KN 242 (325)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT-TCCC--CCSHHH------HT
T ss_pred CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc-CCCC--CCcccc------cC
Confidence 89999999999999999999999999999999999999753221 0111111111111 1110 000000 01
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 918 EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 918 ~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...++.+++.+|++.||++|||++|+++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 1235667888999999999999999874
No 109
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-35 Score=344.79 Aligned_cols=238 Identities=22% Similarity=0.332 Sum_probs=189.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCC-eeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK-AAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~-~~~lv~Ey~~ 764 (966)
.....+|+|+||.||++.. .|..||||++.... ..+.|.+|+..+.+ ++|||||+++|+|.+++ ..|+|||||+
T Consensus 196 ~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHT-CCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred EEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHh-ccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 3455679999999999986 47899999986433 45678889888887 69999999999987765 7999999999
Q ss_pred CCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---CC
Q 002105 765 GKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---SK 836 (966)
Q Consensus 765 ~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---~~ 836 (966)
+|+|.++++. +++..+..++.|||+||+||| +.+|+||||||+|||++.+. .++++|||++.... ..
T Consensus 271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTS--CEEECCCTTCEECC-----
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCC--CEEEeeCCCcccccccccC
Confidence 9999999963 689999999999999999999 45899999999999998654 57899999986532 22
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
..+++.|+|||.+.+..++.++|||||||++|||+| |+.||..... .+ +...+. .+.. +.....++
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-~~-~~~~i~---~~~~------~~~p~~~~-- 412 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KD-VVPRVE---KGYK------MDAPDGCP-- 412 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-TT-HHHHHH---TTCC------CCCCTTCC--
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HH-HHHHHH---cCCC------CCCCCcCC--
Confidence 356789999999999999999999999999999999 9999875321 11 212221 1111 11111222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTKTLESC 950 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~ 950 (966)
.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 413 ----~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 413 ----PAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 3566788899999999999999999999983
No 110
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.9e-36 Score=332.64 Aligned_cols=241 Identities=24% Similarity=0.296 Sum_probs=188.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|+||.||+++...+|..||||.+.... ..+.+|++.+.++.+|||||++++++.+++..|+|||||++
T Consensus 25 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 25 EVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 44456789999999999998899999999986432 34567888888866899999999999999999999999999
Q ss_pred CCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC--CceEEEeccccceecC------
Q 002105 766 KELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD--EPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 766 g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~--~~~~~~~~~~~~~~~~------ 834 (966)
|+|.+++. .+++.+...++.||+.||+|||. .+|+||||||+||++.++. ...++++|||++....
T Consensus 101 g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 177 (342)
T 2qr7_A 101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177 (342)
T ss_dssp CBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCB
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCce
Confidence 99999986 38999999999999999999994 5899999999999985432 2458999999986422
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-hhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV-HESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||++.+..|+.++|||||||++|||++|+.||...... ...+...+.. .... ..+......+
T Consensus 178 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~----~~~~--~~~~~~~~~s 251 (342)
T 2qr7_A 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS----GKFS--LSGGYWNSVS 251 (342)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH----CCCC--CCSTTTTTSC
T ss_pred eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc----CCcc--cCccccccCC
Confidence 2346899999999998888999999999999999999999999753222 2222121111 1110 0000111122
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ ++.+++.+|++.||++|||+.||++
T Consensus 252 ---~---~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 252 ---D---TAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ---H---HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---H---HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2 4566788999999999999999874
No 111
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-35 Score=325.57 Aligned_cols=235 Identities=20% Similarity=0.337 Sum_probs=185.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...+|+.||+|++..... ...+.+.+|...+.+ ++|||||++++++.+++..|+||||
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-VTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCBTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhh-CCCCCCceEeEEEEeCCEEEEEEeC
Confidence 445567899999999999988999999999865321 122335556666655 7999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---CC
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---SK 836 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---~~ 836 (966)
+++|+|.++++ .+++.....++.||+.||+||| +.+|+||||||+||+++.++ .++++|||++.... ..
T Consensus 88 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g--~~kL~Dfg~a~~~~~~~~~ 162 (318)
T 1fot_A 88 IEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNG--HIKITDFGFAKYVPDVTYT 162 (318)
T ss_dssp CCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTS--CEEECCCSSCEECSSCBCC
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCC--CEEEeecCcceecCCcccc
Confidence 99999999996 3889999999999999999999 56999999999999998654 58999999986532 34
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
.+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.. + ..... . .......+
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~-~---~i~~~-~------~~~p~~~~--- 227 (318)
T 1fot_A 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-TMKTY-E---KILNA-E------LRFPPFFN--- 227 (318)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-HHHHH-H---HHHHC-C------CCCCTTSC---
T ss_pred ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHH-H---HHHhC-C------CCCCCCCC---
Confidence 578999999999999999999999999999999999999997532 11111 1 11111 0 01111122
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARP-----CASDVT 944 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~ 944 (966)
+ ++.+++.+|++.||++|| +++||.
T Consensus 228 ~---~~~~li~~lL~~dp~~R~~~~~~~~~~i~ 257 (318)
T 1fot_A 228 E---DVKDLLSRLITRDLSQRLGNLQNGTEDVK 257 (318)
T ss_dssp H---HHHHHHHHHTCSCTTTCTTSSTTTTHHHH
T ss_pred H---HHHHHHHHHhccCHHHcCCCcCCCHHHHh
Confidence 2 456777899999999999 788876
No 112
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.4e-37 Score=342.87 Aligned_cols=253 Identities=19% Similarity=0.259 Sum_probs=192.3
Q ss_pred cccccccCCCCCccEEEEEE----EecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEe--cCCeeE
Q 002105 684 TEENLTSRGKKGVSSSYKVR----SLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCR--SEKAAY 757 (966)
Q Consensus 684 ~~~~~~~~g~~g~~~vy~~~----~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~--~~~~~~ 757 (966)
.+.....+|+|++|.||+++ ...++..||||++........+.+.+|+..+.+ ++|||||++++++. ..+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA-LHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHh-cCCCceeEEEEEEecCCCceEE
Confidence 34556678999999999998 456888999999876554445568888888887 69999999999987 456789
Q ss_pred EEEEccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105 758 LVYEYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~ 833 (966)
+||||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+ ..++++|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESE--AHVKIADFGLAKLL 177 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEET--TEEEECCGGGCEEC
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCC--CCEEEcccccceec
Confidence 99999999999999963 899999999999999999999 4599999999999999865 45789999988642
Q ss_pred C---------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch----------hhHHHHHHHh
Q 002105 834 D---------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVH----------ESIVEWARYC 894 (966)
Q Consensus 834 ~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~----------~~~~~~~~~~ 894 (966)
. ....+|+.|+|||++.+..++.++|||||||++|||+||+.|+....... ....+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL- 256 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH-
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH-
Confidence 2 22357788999999998889999999999999999999999975321100 000000000
Q ss_pred hccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 895 YSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 895 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
..... .+.....+ ..++.+++.+|++.||++|||++||++.|++++...
T Consensus 257 ~~~~~-----~~~~~~~~------~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 257 LEEGQ-----RLPAPPAC------PAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHTTC-----CCCCCTTC------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hhccc-----CCCCCCcc------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 00000 00011111 135667888999999999999999999999865544
No 113
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-35 Score=330.41 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=187.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcE----EEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQ----FVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~----vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
+.....+|+|++|.||+|+...++.. ||+|.+.... ....+.+.+|+..+.+ ++|||||+++++|. ++..++|
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~-~~~~~~v 92 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS-LDHAHIVRLLGLCP-GSSLQLV 92 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHT-CCCTTBCCEEEEEC-BSSEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEc-CCccEEE
Confidence 34455679999999999998777766 6677664332 2334567788888877 69999999999986 4568999
Q ss_pred EEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 760 YEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|||+++|+|.++++ .+++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPS--QVQVADFGVADLLPP 167 (325)
T ss_dssp EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSS--CEEECSCSGGGGSCC
T ss_pred EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCC--eEEECCCCcccccCc
Confidence 99999999999995 48899999999999999999994 5899999999999998654 57899999986421
Q ss_pred -------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 835 -------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 835 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+.+.... .... ..|
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~---~~~~---~~~ 239 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEK---GERL---AQP 239 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHT---TCBC---CCC
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHc---CCCC---CCC
Confidence 22346778999999998899999999999999999999 9999975422 122122221 1000 011
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
...+ .++.+++.+||+.||++|||++||++.|++..+
T Consensus 240 ---~~~~------~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 240 ---QICT------IDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---TTBC------TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CcCc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111 135567889999999999999999999998554
No 114
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=334.42 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=192.6
Q ss_pred cccccCCCCCccEEEEEEEec--------CCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeE------------
Q 002105 686 ENLTSRGKKGVSSSYKVRSLA--------NDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVR------------ 745 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~--------~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~------------ 745 (966)
.....+|+|++|.||+|+... ++..||||.+... +.+.+|+..+.+ ++|||||+
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQR-AAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHH-HCCHHHHHHHHHHTTCTTCS
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHH-hcccchhhhhhhhccCCccC
Confidence 444567899999999999866 4889999988643 467888888887 69999988
Q ss_pred ---EeeEEec-CCeeEEEEEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC
Q 002105 746 ---LHGVCRS-EKAAYLVYEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG 816 (966)
Q Consensus 746 ---l~g~~~~-~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~ 816 (966)
+++++.. ++..|+||||+ +|+|.++++. +++..+..++.||+.||+|||. .+|+||||||+||+++.
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDP 194 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEET
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcC
Confidence 6777776 78899999999 9999999963 8999999999999999999994 59999999999999997
Q ss_pred CCCceEEEeccccceecC-------------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc
Q 002105 817 KDEPHLRLSVPGLAYCTD-------------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV 883 (966)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~ 883 (966)
+....++++|||++.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 654578999999985321 2236899999999999999999999999999999999999999764323
Q ss_pred hhhHHHHHHHhhccCccccccccccc-CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 884 HESIVEWARYCYSDCHLDTWVDPFIR-GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
...+.......... ...+.++... ..++ .++.+++.+|++.||++|||++||+++|++++...
T Consensus 275 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 275 TEDIMKQKQKFVDK--PGPFVGPCGHWIRPS------ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHHHHHS--CCCEECTTSCEECCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCC--hhhhhhhccccCCCc------HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 33232222211111 1111111100 0111 35667788999999999999999999999976553
No 115
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-35 Score=338.55 Aligned_cols=242 Identities=20% Similarity=0.312 Sum_probs=187.1
Q ss_pred cccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 684 TEENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 684 ~~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
++.....+|+|+||.||+|+...++..||+|++.... ....+.+.+|...+.+ ++|||||+++++|.+++..|+||
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEE
Confidence 3455667899999999999998899999999986532 2233446666666655 79999999999999999999999
Q ss_pred EccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 761 EYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 761 Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
|||+||+|.++++. +++.....++.||+.||+||| +.+||||||||+|||++.++ +++++|||++....
T Consensus 149 E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g--~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp CCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTSE
T ss_pred eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCC--CEEEeccceeEeeccCCc
Confidence 99999999999974 889999999999999999999 45899999999999998654 58999999986422
Q ss_pred ---CCCcCCcccccccccCCCC----CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 835 ---SKSINSSAYVAPETKESKD----ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~~~----~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
...+||+.|||||++.+.. |+.++|||||||++|||+||+.||.+... .+.......... ... -|.
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~-~~~-----~p~ 296 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMNHKN-SLT-----FPD 296 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTHHH-HCC-----CCT
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-hhHHHHHHhccc-ccc-----CCC
Confidence 2457999999999987655 88999999999999999999999975421 111111111000 000 010
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTA--RPCASDVTK 945 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--RPt~~~v~~ 945 (966)
....+ + ++.+++.+|++.+|.+ ||+++||.+
T Consensus 297 -~~~~s---~---~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 297 -DNDIS---K---EAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp -TCCCC---H---HHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred -ccccc---H---HHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 00111 2 4566778999999988 999999875
No 116
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=331.85 Aligned_cols=238 Identities=19% Similarity=0.261 Sum_probs=187.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|++|.||+|+...++..||+|++.... ....+.+.+|+..+.+ ++|||||+++++|.+++..|+|||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~lv~e 95 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG-LEHPFLVNLWYSFQDEEDMFMVVD 95 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEEe
Confidence 345566799999999999998899999999986432 2223456778877777 699999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
|++||+|.++++ .+++.....++.||+.||+||| +.+|+||||||+|||++.++ .++++|||++...
T Consensus 96 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 96 LLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHG--HVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp CCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTCC
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCC--CEEEeccceeeeccCCCc
Confidence 999999999997 4899999999999999999999 45899999999999998654 5789999998653
Q ss_pred CCCCcCCcccccccccCC---CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-hhhHHHHHHHhhccCccccccccccc
Q 002105 834 DSKSINSSAYVAPETKES---KDITEKGDIYGFGLILIDLLTGKSPADADFGV-HESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
.....||+.|+|||++.. ..|+.++|||||||++|||+||+.||...... .......... . . +...
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~---~-~------~~~p 240 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET---T-V------VTYP 240 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH---C-C------CCCC
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh---c-c------cCCC
Confidence 234578999999999863 45899999999999999999999999754322 1111111111 0 0 0011
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCC-HHHHH
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPC-ASDVT 944 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-~~~v~ 944 (966)
..++ .++.+++.+|++.||++||+ +++|.
T Consensus 241 ~~~s------~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 241 SAWS------QEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp TTSC------HHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred CcCC------HHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 1122 25667888999999999999 66664
No 117
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-35 Score=334.87 Aligned_cols=239 Identities=24% Similarity=0.299 Sum_probs=181.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+..+..+|+|++|.||+|+...++..||+|++..... .....+..|...+.+.++|||||++++++.+++..|+|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 4556678999999999999988899999999865432 2233455666555555799999999999999999999999
Q ss_pred ccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
|++||+|.++++. +++.....++.||+.||+||| +.+|+||||||+|||++.++ +++++|||++...
T Consensus 120 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g--~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 120 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEECCCCBCGGGBCCCC
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCC--CEEEeeCccccccccCCC
Confidence 9999999999863 889999999999999999999 45899999999999999654 6899999987641
Q ss_pred -CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 -DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+.+.+ ... .. .+....
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i---~~~-~~------~~~~~~ 262 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--TAEMYDNI---LNK-PL------QLKPNI 262 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--HHHHHHHH---HHS-CC------CCCSSS
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--HHHHHHHH---Hhc-cc------CCCCCC
Confidence 234578999999999999999999999999999999999999997532 11111111 111 00 011112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
+ . ++.+++.+|++.||++||++.+.++.
T Consensus 263 ~---~---~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 263 T---N---SARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp C---H---HHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred C---H---HHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 2 2 45667789999999999998654433
No 118
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.2e-35 Score=331.46 Aligned_cols=258 Identities=19% Similarity=0.323 Sum_probs=192.2
Q ss_pred cccccCCCCCccEEEEEEEe-------cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKVRSL-------ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~-------~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
.....+|+|++|.||+|+.. .++..||||++..... ...+.+.+|+..+.++.+|||||+++++|..++..+
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 117 (334)
T 2pvf_A 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117 (334)
T ss_dssp EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCE
T ss_pred EEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceE
Confidence 34456789999999999874 3567899998764322 223457788888877448999999999999999999
Q ss_pred EEEEccCCCCHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC
Q 002105 758 LVYEYIEGKELSEVLRN-------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD 818 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~ 818 (966)
+||||+++|+|.++++. ++|..+..++.||++||+||| +.+|+||||||+||+++.+.
T Consensus 118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194 (334)
T ss_dssp EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC
T ss_pred EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEEcCCC
Confidence 99999999999999963 789999999999999999999 45899999999999998654
Q ss_pred CceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHH
Q 002105 819 EPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVE 889 (966)
Q Consensus 819 ~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~ 889 (966)
.++++|||.+.... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.. ...+.+
T Consensus 195 --~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~ 270 (334)
T 2pvf_A 195 --VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFK 270 (334)
T ss_dssp --CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHH
T ss_pred --CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC--HHHHHH
Confidence 57899999886432 22356788999999988889999999999999999999 999986531 222212
Q ss_pred HHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCcCCCCccCCC
Q 002105 890 WARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISSCVSGLKFSSP 965 (966)
Q Consensus 890 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~~~~~~~~~~~ 965 (966)
.... ... +.....++ .++.+++.+||+.||++|||++||++.|++++........+..|.|
T Consensus 271 ~~~~---~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~~~~~ 331 (334)
T 2pvf_A 271 LLKE---GHR------MDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331 (334)
T ss_dssp HHHH---TCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----------
T ss_pred HHhc---CCC------CCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccCCCCc
Confidence 2211 110 01111122 2566788899999999999999999999997665555555555544
No 119
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.2e-35 Score=329.81 Aligned_cols=238 Identities=21% Similarity=0.304 Sum_probs=183.7
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc---cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI---TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~---~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...+++.||+|++...... ..+.+.+|...+.++.+|||||++++++.+++..|+||||
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~ 91 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 91 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeC
Confidence 4455679999999999999888999999998754322 1233566777777755899999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------ 833 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------ 833 (966)
+++|+|.++++ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ +++++|||++...
T Consensus 92 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g--~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 92 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCGGGCBCSCCTTCC
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCC--CEEEEeccccccccCCCCc
Confidence 99999999986 4899999999999999999999 45899999999999998654 5899999988642
Q ss_pred CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchh---hHHHHHHHhhccCcccccccccccC
Q 002105 834 DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHE---SIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+||+.|+|||++.+..++.++|||||||++|||+||+.||........ ...+.......... +.+..
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------~~~p~ 240 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------IRIPR 240 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC------CCCCT
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC------CCCCC
Confidence 2345789999999999999999999999999999999999999964211100 00011111111111 01111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCA 940 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 940 (966)
..+ .++.+++.+|++.||++||++
T Consensus 241 ~~s------~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 SLS------VKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TSC------HHHHHHHHHHTCSSTTTSTTC
T ss_pred CCC------HHHHHHHHHHhcCCHhHCCCC
Confidence 122 245677889999999999996
No 120
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.8e-36 Score=332.70 Aligned_cols=235 Identities=19% Similarity=0.277 Sum_probs=184.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|++..++..||||++.... ......+.+|+..+.+ ++|||||++++++..++..++||||
T Consensus 12 ~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL-LRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 34456789999999999998999999999986431 1223456778777766 7999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+ +|+|.+++. .+++.++..++.|++.||+|||. .+|+||||||+||+++++. .++++|||++....
T Consensus 91 ~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~--~~kl~DFG~s~~~~~~~~~ 164 (336)
T 3h4j_B 91 A-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFL 164 (336)
T ss_dssp C-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTC--CEEECCSSCTBTTTTSBTT
T ss_pred C-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCC--CEEEEEeccceeccCCccc
Confidence 9 689999885 48999999999999999999995 4899999999999999654 57899999886422
Q ss_pred CCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
...+||+.|+|||.+.+..+ +.++|||||||++|||+||+.||+..... .. ...... ....+....+
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~--------~~~i~~---~~~~~p~~~s 232 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NL--------FKKVNS---CVYVMPDFLS 232 (336)
T ss_dssp CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-TC--------BCCCCS---SCCCCCTTSC
T ss_pred ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-HH--------HHHHHc---CCCCCcccCC
Confidence 34578999999999988876 68999999999999999999999754211 00 000000 0011111122
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||.+|||++|+++
T Consensus 233 ------~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 233 ------PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ------HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 24567888999999999999999975
No 121
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.8e-36 Score=334.09 Aligned_cols=242 Identities=19% Similarity=0.187 Sum_probs=184.9
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEecc-----CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV-----NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~-----~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
.....+|+|++|.||+|+...++..||+|++... .....+.+.+|+..+.+ ++|||||++++++.+++..++||
T Consensus 29 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~ 107 (345)
T 3hko_A 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK-LHHPNIARLYEVYEDEQYICLVM 107 (345)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEE
T ss_pred eecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHh-CCCCCcceeehhhccCCeEEEEE
Confidence 3445578889999999999889999999998643 22233567788888877 69999999999999999999999
Q ss_pred EccCCCCHHHHHHc-------------------------------------------CCHHHHHHHHHHHHHHHHHHhhc
Q 002105 761 EYIEGKELSEVLRN-------------------------------------------LSWERRRKVAIGIAKALRFLHFH 797 (966)
Q Consensus 761 Ey~~~g~L~~~l~~-------------------------------------------l~~~~~~~i~~~ia~~l~yLH~~ 797 (966)
|||++|+|.++++. +++.....++.|+++||+|||.
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~- 186 (345)
T 3hko_A 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN- 186 (345)
T ss_dssp ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999998841 2456677899999999999994
Q ss_pred CCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----------CCCCcCCcccccccccCC--CCCCCcchHHHHHH
Q 002105 798 CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----------DSKSINSSAYVAPETKES--KDITEKGDIYGFGL 865 (966)
Q Consensus 798 ~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~S~Gv 865 (966)
.+|+||||||+||+++.+....++++|||.+... .....||+.|+|||.+.+ ..++.++|||||||
T Consensus 187 --~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 187 --QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp --TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred --CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 5899999999999998776667899999988642 123468999999999865 67899999999999
Q ss_pred HHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 866 ILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 866 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
++|||+||+.||..... .+..... ..... ....|... ..+ .++.+++.+|++.||++|||+.|+++
T Consensus 265 il~el~~g~~pf~~~~~-~~~~~~~----~~~~~--~~~~~~~~-~~~------~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVND-ADTISQV----LNKKL--CFENPNYN-VLS------PLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHSSCSSCCSSH-HHHHHHH----HHCCC--CTTSGGGG-GSC------HHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCCCCCCh-HHHHHHH----Hhccc--ccCCcccc-cCC------HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999999999975421 1111111 11110 00111110 111 24667888999999999999999976
No 122
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=324.03 Aligned_cols=239 Identities=18% Similarity=0.314 Sum_probs=181.7
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--------------------------cccchHHHHHHHHhhc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--------------------------TTSSFWPDVSQFGKLI 738 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--------------------------~~~~~~~e~~~~~~~~ 738 (966)
+.....+|+|++|.||+|+...++..||||++...... ..+.+.+|+..+.+ +
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l 93 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK-L 93 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT-C
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh-C
Confidence 34455679999999999999889999999998654211 12457788888877 6
Q ss_pred CCCceeEEeeEEec--CCeeEEEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEE
Q 002105 739 MHPNIVRLHGVCRS--EKAAYLVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIV 814 (966)
Q Consensus 739 ~H~niv~l~g~~~~--~~~~~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill 814 (966)
+|||||++++++.+ ++..|+||||+++|+|.+++. .+++.+...++.||++||+|||. .+|+||||||+||++
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~ 170 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLV 170 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEE
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEE
Confidence 99999999999986 568999999999999988764 48999999999999999999994 589999999999999
Q ss_pred cCCCCceEEEeccccceecC------CCCcCCcccccccccCCCC---CCCcchHHHHHHHHHHHHcCCCCCCCCCCchh
Q 002105 815 DGKDEPHLRLSVPGLAYCTD------SKSINSSAYVAPETKESKD---ITEKGDIYGFGLILIDLLTGKSPADADFGVHE 885 (966)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~---~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~ 885 (966)
+.+. .++++|||++.... ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... ..
T Consensus 171 ~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~ 246 (298)
T 2zv2_A 171 GEDG--HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--IM 246 (298)
T ss_dssp CTTS--CEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS--HH
T ss_pred CCCC--CEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc--HH
Confidence 8654 57899999886532 2346899999999987665 3778999999999999999999987531 11
Q ss_pred hHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 886 SIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.+....... ... .|. ....+ .++.+++.+|++.||++|||+.|+++
T Consensus 247 ---~~~~~~~~~-~~~---~~~-~~~~~------~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 247 ---CLHSKIKSQ-ALE---FPD-QPDIA------EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ---HHHHHHHHC-CCC---CCS-SSCCC------HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---HHHHHHhcc-cCC---CCC-ccccC------HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 111111111 100 010 01111 24667788999999999999999864
No 123
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=329.71 Aligned_cols=248 Identities=20% Similarity=0.273 Sum_probs=189.6
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEe----cCCeeEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCR----SEKAAYLVY 760 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~----~~~~~~lv~ 760 (966)
+.....+|+|++|.||+++...++..||||++........+.+.+|+..+.+ ++|||||++++++. ..+..++||
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL-FNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHT-CCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhh-cCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 4555667999999999999988999999999876554455667888887777 69999999999997 345789999
Q ss_pred EccCCCCHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105 761 EYIEGKELSEVLRN-------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 761 Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~ 833 (966)
||+++|+|.++++. +++.++..++.|+++||+|||. .+|+||||||+||+++.+. .+++.|||.+...
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~--~~kl~dfg~~~~~ 184 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEG--QPVLMDLGSMNQA 184 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTS--CEEECCCSSCEES
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCC--CEEEEecCcchhc
Confidence 99999999999864 8999999999999999999994 4899999999999998654 4788999976542
Q ss_pred CC---------------CCcCCcccccccccCCCC---CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhh
Q 002105 834 DS---------------KSINSSAYVAPETKESKD---ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCY 895 (966)
Q Consensus 834 ~~---------------~~~~~~~y~aPE~~~~~~---~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 895 (966)
.. ...||+.|+|||.+.+.. ++.++|||||||++|||++|+.||................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-- 262 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-- 262 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--
Confidence 11 124689999999987554 6899999999999999999999985311111111111110
Q ss_pred ccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 896 SDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 896 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
... .|. ....+ .++.+++.+||+.||++|||++||++.|++ +..+
T Consensus 263 -~~~-----~~~-~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~-~~~~ 307 (317)
T 2buj_A 263 -QLS-----IPQ-SPRHS------SALWQLLNSMMTVDPHQRPHIPLLLSQLEA-LQPP 307 (317)
T ss_dssp -C-------CCC-CTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH-TCCC
T ss_pred -cCC-----CCc-cccCC------HHHHHHHHHHhhcChhhCCCHHHHHHHhhh-cCCC
Confidence 000 010 01111 256678889999999999999999999998 5544
No 124
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.7e-36 Score=322.91 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=181.4
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc----cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI----TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~----~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
....+|+|++|.||+|+. .+..||||++...... ..+.+.+|+..+.+ ++|||||++++++..++..++||||
T Consensus 11 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM-LKHPNIIALRGVCLKEPNLCLVMEF 87 (271)
T ss_dssp EEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHH-CCCTTBCCEEEEECCC--CEEEEEC
T ss_pred eeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHh-cCCCCEeeEEEEEecCCceEEEEEc
Confidence 344578999999999986 4889999987543222 12346677777766 7999999999999999999999999
Q ss_pred cCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC------CceEEEeccccceec-
Q 002105 763 IEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD------EPHLRLSVPGLAYCT- 833 (966)
Q Consensus 763 ~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~------~~~~~~~~~~~~~~~- 833 (966)
+++|+|.++++ .+++..+..++.|+++||+|||.....+|+||||||+||+++.+. ...++++|||.+...
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 167 (271)
T 3dtc_A 88 ARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167 (271)
T ss_dssp CTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----
T ss_pred CCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccc
Confidence 99999999995 589999999999999999999966333499999999999998632 456899999988542
Q ss_pred ---CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 834 ---DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 834 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||..... .... . ...... ..+....
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~-~---~~~~~~-----~~~~~~~ 237 (271)
T 3dtc_A 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-LAVA-Y---GVAMNK-----LALPIPS 237 (271)
T ss_dssp --------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-HHHH-H---HHHTSC-----CCCCCCT
T ss_pred cccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHH-H---hhhcCC-----CCCCCCc
Confidence 2234689999999999988999999999999999999999999975321 1111 1 111110 0111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
..+ .++.+++.+||+.||++|||+.||++.|++
T Consensus 238 ~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 238 TCP------EPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ccC------HHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 222 256678889999999999999999999986
No 125
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.2e-35 Score=321.59 Aligned_cols=237 Identities=18% Similarity=0.272 Sum_probs=185.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+...++..||+|++.... .....++.+|+..+.++.+|||||++++++.+++..++||||+
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 93 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 93 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEec
Confidence 34456789999999999998899999999986532 2334567888888888559999999999999999999999999
Q ss_pred CCCCHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-----------------C
Q 002105 764 EGKELSEVLRN-------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-----------------E 819 (966)
Q Consensus 764 ~~g~L~~~l~~-------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-----------------~ 819 (966)
++|+|.++++. +++..+..++.||++||+|||. .+|+||||||+||+++.+. .
T Consensus 94 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 94 NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------------C
T ss_pred CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 99999999953 7999999999999999999994 5899999999999998542 3
Q ss_pred ceEEEeccccceecC--CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhc
Q 002105 820 PHLRLSVPGLAYCTD--SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYS 896 (966)
Q Consensus 820 ~~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 896 (966)
..++++|||.+.... ....||+.|+|||.+.+. .++.++|||||||++|||++|++|+... ... .... .
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~-~~~~---~ 242 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQW-HEIR---Q 242 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHH-HHHH---T
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHH-HHHH---c
Confidence 467899999886533 334689999999998765 5678999999999999999999876432 111 1111 1
Q ss_pred cCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 897 DCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 897 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
... +.+....+ .++.+++.+|++.||++|||+.|+++
T Consensus 243 -~~~-----~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 243 -GRL-----PRIPQVLS------QEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -TCC-----CCCSSCCC------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCC-----CCCCcccC------HHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 11122222 24667788999999999999999875
No 126
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-36 Score=333.91 Aligned_cols=245 Identities=21% Similarity=0.366 Sum_probs=190.8
Q ss_pred cccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
.....+|+|++|.||+|+.. .++..||||++..... ...+.+.+|+..+.+ ++|||||+++++|.+++..++|
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv 128 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE-FDNPNIVKLLGVCAVGKPMCLL 128 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEccCCceEEE
Confidence 44556789999999999986 3447899998864322 223457788888877 6999999999999999999999
Q ss_pred EEccCCCCHHHHHHc---------------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcE
Q 002105 760 YEYIEGKELSEVLRN---------------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKV 812 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~---------------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Ni 812 (966)
|||+++|+|.++++. +++.++..++.||++||+||| +.+|+||||||+||
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NI 205 (343)
T 1luf_A 129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNC 205 (343)
T ss_dssp EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceE
Confidence 999999999999853 788999999999999999999 45899999999999
Q ss_pred EEcCCCCceEEEeccccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCc
Q 002105 813 IVDGKDEPHLRLSVPGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGV 883 (966)
Q Consensus 813 ll~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~ 883 (966)
+++.+. .++++|||.+... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 206 l~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-- 281 (343)
T 1luf_A 206 LVGENM--VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-- 281 (343)
T ss_dssp EECGGG--CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--
T ss_pred EECCCC--eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC--
Confidence 998654 5789999987531 223457889999999988889999999999999999999 999986532
Q ss_pred hhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 884 HESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
...+...+. .. ... .....++ .++.+++.+||+.||++||++.||++.|+++...
T Consensus 282 ~~~~~~~~~---~~-~~~-----~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 282 HEEVIYYVR---DG-NIL-----ACPENCP------LELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HHHHHHHHH---TT-CCC-----CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred hHHHHHHHh---CC-CcC-----CCCCCCC------HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 121212111 11 110 1111222 2566788899999999999999999999995443
No 127
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-35 Score=325.85 Aligned_cols=243 Identities=19% Similarity=0.285 Sum_probs=183.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+. ...+|+|.+.... ....+.|.+|+..+.+ ++|||||++++++. ++..++||||+
T Consensus 39 ~~~~~lG~G~~g~Vy~~~~---~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~-~~~~~lv~e~~ 113 (307)
T 3lb7_A 39 MLSTRIGSGSFGTVYKGKW---HGDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILLFMGYMT-KDNLAIVTQWC 113 (307)
T ss_dssp CEEEEEEECSSCEEEEEES---SSEEEEEECCCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEEeEecCCCCeEEEEEEE---CCEEEEEEEecCCCCHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEc-cCcEEEEEecC
Confidence 4455679999999999975 2357888765332 2223457788888777 69999999999875 45689999999
Q ss_pred CCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105 764 EGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------ 833 (966)
Q Consensus 764 ~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------ 833 (966)
++|+|.++++ .+++.++..++.||+.||+|||. .+|+||||||+||+++.+. .++++|||++...
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~--~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGL--TVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTS--CEEECCCCSSCC-------
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCC--CEEEccCCCceeccccccc
Confidence 9999999996 48999999999999999999994 5899999999999999654 5789999987532
Q ss_pred --CCCCcCCcccccccccC---CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccc
Q 002105 834 --DSKSINSSAYVAPETKE---SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI 908 (966)
Q Consensus 834 --~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 908 (966)
.....||+.|+|||++. +..++.++|||||||++|||+||+.||..... .+.+...+.... ..|.+
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~~--------~~~~~ 259 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGY--------ASPDL 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHTC--------CCCCS
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcCC--------CCcch
Confidence 12346899999999875 66789999999999999999999999975432 222212221111 11111
Q ss_pred cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 002105 909 RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESC 950 (966)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~ 950 (966)
...... ...++.+++.+||+.+|++||++.||++.|+..
T Consensus 260 ~~~~~~---~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 260 SKLYKN---CPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp TTSCSS---SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred hhhhcC---CcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 111111 113566788899999999999999999999983
No 128
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-35 Score=331.10 Aligned_cols=234 Identities=18% Similarity=0.244 Sum_probs=184.8
Q ss_pred cccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 684 TEENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 684 ~~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
+......+|+|++|.||+|+...+|+.||+|++.... ....+.+..|...+.+..+|||||++++++.+++..|+||
T Consensus 21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 100 (353)
T 2i0e_A 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 100 (353)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence 3455667899999999999998889999999986532 1223345667777766448999999999999999999999
Q ss_pred EccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----
Q 002105 761 EYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---- 833 (966)
Q Consensus 761 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---- 833 (966)
||++||+|.++++ .+++.....++.||+.||+||| +.+|+||||||+|||++.++ +++++|||++...
T Consensus 101 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDG 175 (353)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTT
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCC--cEEEEeCCcccccccCC
Confidence 9999999999996 4899999999999999999999 45899999999999998654 6899999988642
Q ss_pred --CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCC
Q 002105 834 --DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGH 911 (966)
Q Consensus 834 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 911 (966)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ...+.+.+. .. . +.....
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~---~~-~------~~~p~~ 243 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDELFQSIM---EH-N------VAYPKS 243 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HC-C------CCCCTT
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--HHHHHHHHH---hC-C------CCCCCC
Confidence 234578999999999999999999999999999999999999997542 111111111 11 0 011112
Q ss_pred CcchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002105 912 VSSIQNEIVEIMNLALHCTAGDPTARPCA 940 (966)
Q Consensus 912 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 940 (966)
.+ .++.+++.+|++.||++||++
T Consensus 244 ~s------~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 244 MS------KEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp SC------HHHHHHHHHHTCSCTTSCTTC
T ss_pred CC------HHHHHHHHHHhhcCHHHcCCC
Confidence 22 246677889999999999964
No 129
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.3e-35 Score=324.97 Aligned_cols=241 Identities=22% Similarity=0.305 Sum_probs=190.2
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc------cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI------TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~------~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
....+|+|++|.||+|+...+|..||||.+...... ..+++.+|+..+.+ ++|||||++++++.+++..++||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~ 94 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ-VLHHNVITLHDVYENRTDVVLIL 94 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHh-CCCCCcceEEEEEecCCEEEEEE
Confidence 345578899999999999889999999998654322 13347788887777 69999999999999999999999
Q ss_pred EccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC--ceEEEeccccceecC-
Q 002105 761 EYIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE--PHLRLSVPGLAYCTD- 834 (966)
Q Consensus 761 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~--~~~~~~~~~~~~~~~- 834 (966)
||+++|+|.+++.. +++..+..++.|++.||+||| +.+|+||||||+||+++.+.. ..++++|||.+....
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~ 171 (321)
T 2a2a_A 95 ELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (321)
T ss_dssp CCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence 99999999999974 789999999999999999999 458999999999999987653 268999999986532
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||..... .+.. ... .. ... . .++....
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~-~~i---~~-~~~-~-~~~~~~~ 243 (321)
T 2a2a_A 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETL-ANI---TS-VSY-D-FDEEFFS 243 (321)
T ss_dssp TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHH-HHH---HT-TCC-C-CCHHHHT
T ss_pred cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-HHHH-HHH---Hh-ccc-c-cChhhhc
Confidence 234689999999999999999999999999999999999999975421 1111 111 11 000 0 1111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..+ .++.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~------~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 244 HTS------ELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp TCC------HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccC------HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 122 24667888999999999999999975
No 130
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.7e-35 Score=328.55 Aligned_cols=235 Identities=20% Similarity=0.273 Sum_probs=187.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...+|..||+|.+..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~ 122 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFPFLVKLEFSFKDNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEcCCEEEEEEcC
Confidence 445567899999999999988999999999864321 223346677777766 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---CC
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---SK 836 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---~~ 836 (966)
+++|+|.++++ .+++.....++.||+.||+||| +.+|+||||||+||+++.++ .++++|||++.... ..
T Consensus 123 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g--~~kL~DFg~a~~~~~~~~~ 197 (350)
T 1rdq_E 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp CTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECSSCBCC
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCC--CEEEcccccceeccCCccc
Confidence 99999999996 4899999999999999999999 45899999999999998654 57899999987533 34
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+.+.+ ... .. .+....+
T Consensus 198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i---~~~-~~------~~p~~~~--- 262 (350)
T 1rdq_E 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--PIQIYEKI---VSG-KV------RFPSHFS--- 262 (350)
T ss_dssp CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHC-CC------CCCTTCC---
T ss_pred ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--HHHHHHHH---HcC-CC------CCCCCCC---
Confidence 578999999999999999999999999999999999999997542 11111111 111 10 1111222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARPC-----ASDVT 944 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RPt-----~~~v~ 944 (966)
.++.+++.+|++.||++||+ ++||.
T Consensus 263 ---~~~~~li~~lL~~dp~~R~~~~~~~~~ei~ 292 (350)
T 1rdq_E 263 ---SDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 292 (350)
T ss_dssp ---HHHHHHHHHHSCSCTTTCTTSSTTTTHHHH
T ss_pred ---HHHHHHHHHHhhcCHHhccCCccCCHHHHH
Confidence 24667788999999999998 77775
No 131
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.3e-35 Score=321.97 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=179.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...+|..||+|++..... ...+.+.+|+..+.+ ++|||||++++++..++..++||||++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE-LKHENIVRLYDVIHTENKLTLVFEFMD 86 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTT-CCBTTBCCEEEEECCTTEEEEEEECCC
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHh-cCCCCcceEEEEEEECCeEEEEEEecC
Confidence 345567999999999999988899999999865432 233557788887777 699999999999999999999999999
Q ss_pred CCCHHHHHH---------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 765 GKELSEVLR---------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 765 ~g~L~~~l~---------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|+|.+++. .+++..+..++.||++||+||| ..+|+||||||+||+++.++ .++++|||.+....
T Consensus 87 -~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 87 -NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGI 160 (317)
T ss_dssp -CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCSSCEETTS
T ss_pred -CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCC--CEEECcCccceecCC
Confidence 69999885 2789999999999999999999 45999999999999998654 57899999986532
Q ss_pred -----CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc-----
Q 002105 835 -----SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW----- 903 (966)
Q Consensus 835 -----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 903 (966)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+... .+.. ..+...........|
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~-~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-EEQL-KLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHHHHHCSCCTTTCGGGGG
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHH-HHHHHHhCCCChhHhhhhhh
Confidence 23468999999999876 4689999999999999999999999975422 1111 111111110000000
Q ss_pred ---ccccccCCCc-chH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 904 ---VDPFIRGHVS-SIQ---------NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 904 ---~d~~~~~~~~-~~~---------~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..+.+..... ... ....++.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000000 000 01135678889999999999999999875
No 132
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-35 Score=325.52 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=187.3
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHh-hcCCCceeEEeeEEecC----CeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGK-LIMHPNIVRLHGVCRSE----KAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~-~~~H~niv~l~g~~~~~----~~~~lv 759 (966)
+.....+|+|++|.||+|+. .+..||||++.... ...+..|.+.... .++|||||++++++... +..++|
T Consensus 39 y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 39 IQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp CEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred eEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 34555678999999999986 48899999985432 2233444443333 24899999999999887 789999
Q ss_pred EEccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 760 YEYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHC-----SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~-----~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
|||+++|+|.++++. +++..+..++.|++.||+|||..+ .++|+||||||+||+++.+. .++++|||.+..
T Consensus 114 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kl~Dfg~a~~ 191 (337)
T 3mdy_A 114 TDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVK 191 (337)
T ss_dssp ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS--CEEECCCTTCEE
T ss_pred EeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC--CEEEEeCCCcee
Confidence 999999999999974 899999999999999999999431 33999999999999998654 578999998854
Q ss_pred cC----------CCCcCCcccccccccCCCCCCCc------chHHHHHHHHHHHHcC----------CCCCCCCCCchhh
Q 002105 833 TD----------SKSINSSAYVAPETKESKDITEK------GDIYGFGLILIDLLTG----------KSPADADFGVHES 886 (966)
Q Consensus 833 ~~----------~~~~~~~~y~aPE~~~~~~~~~~------~Dv~S~Gv~l~el~tg----------~~p~~~~~~~~~~ 886 (966)
.. ....||+.|+|||++.+..++.+ +|||||||++|||+|| +.||.........
T Consensus 192 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~ 271 (337)
T 3mdy_A 192 FISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS 271 (337)
T ss_dssp CC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred eccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCc
Confidence 21 13468999999999988776665 9999999999999999 6666543222111
Q ss_pred HHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 887 IVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
...+... ..... ..+....... ..+...++.+++.+||+.||++|||+.||++.|+++.+
T Consensus 272 ~~~~~~~-~~~~~----~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 272 YEDMREI-VCIKK----LRPSFPNRWS-SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp HHHHHHH-HTTSC----CCCCCCGGGG-GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhHHH-Hhhhc----cCccccccch-hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 1111111 11111 1111111111 12445568889999999999999999999999999443
No 133
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.7e-35 Score=326.96 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=193.5
Q ss_pred cccccCCCCCccEEEEEEE-----ecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRS-----LANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~-----~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
.....+|+|++|.||+|+. ..++..||||++..... ...+.+.+|+..+.++-+|||||++++++..++..++|
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 105 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 105 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEE
Confidence 3445678999999999985 34667899999865432 23356778888887733899999999999999999999
Q ss_pred EEccCCCCHHHHHHc---------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC
Q 002105 760 YEYIEGKELSEVLRN---------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD 818 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~---------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~ 818 (966)
|||+++|+|.++++. +++..+..++.|+++||+|||. .+|+||||||+||+++.+
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~- 181 (313)
T 1t46_A 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHG- 181 (313)
T ss_dssp EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETT-
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEcCC-
Confidence 999999999999962 7899999999999999999994 589999999999999865
Q ss_pred CceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHH
Q 002105 819 EPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVE 889 (966)
Q Consensus 819 ~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~ 889 (966)
..++++|||.+.... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... ....+
T Consensus 182 -~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~ 259 (313)
T 1t46_A 182 -RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKFYK 259 (313)
T ss_dssp -TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHHHH
T ss_pred -CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHHHH
Confidence 467899999876432 12345678999999988899999999999999999999 99998764322 22212
Q ss_pred HHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 890 WARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 890 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
...... .+......+ .++.+++.+|++.||++|||+.||+++|++.+...
T Consensus 260 ~~~~~~---------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 260 MIKEGF---------RMLSPEHAP------AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHTC---------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HhccCC---------CCCCcccCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 221111 111111122 25667888999999999999999999999966543
No 134
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.3e-35 Score=326.03 Aligned_cols=243 Identities=21% Similarity=0.324 Sum_probs=190.6
Q ss_pred ccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
....+|+|++|.||+|+.. .++..||||++..... ...+.+.+|+..+.+ ++|||||++++++.+++..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ-VNHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhh-CCCCceeeEEEEEecCCceEEEE
Confidence 3445788999999999873 3457899998764322 223457778887777 69999999999999999999999
Q ss_pred EccCCCCHHHHHHc---------------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEE
Q 002105 761 EYIEGKELSEVLRN---------------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVI 813 (966)
Q Consensus 761 Ey~~~g~L~~~l~~---------------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nil 813 (966)
||+++|+|.++++. +++.++..++.|+++||+|||. .+|+||||||+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~NIl 182 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNIL 182 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccchheEE
Confidence 99999999999963 7889999999999999999994 58999999999999
Q ss_pred EcCCCCceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCch
Q 002105 814 VDGKDEPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVH 884 (966)
Q Consensus 814 l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~ 884 (966)
++.+ ..++++|||.+.... ....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 183 i~~~--~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-- 258 (314)
T 2ivs_A 183 VAEG--RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-- 258 (314)
T ss_dssp EETT--TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--
T ss_pred EcCC--CCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9965 458999999876432 22356788999999988889999999999999999999 9999875422
Q ss_pred hhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 885 ESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
+.+.+.... . . .+.....++ .++.+++.+|++.||++|||+.||++.|++++.
T Consensus 259 ~~~~~~~~~---~-~-----~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ERLFNLLKT---G-H-----RMERPDNCS------EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGHHHHHHT---T-C-----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhc---C-C-----cCCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 222222211 1 0 011111122 256678889999999999999999999998654
No 135
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.5e-35 Score=325.53 Aligned_cols=235 Identities=21% Similarity=0.366 Sum_probs=181.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCC----------
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK---------- 754 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~---------- 754 (966)
.....+|+|++|.||+|+...+|..||||++.... ....+.+.+|+..+.+ ++|||||+++++|.+.+
T Consensus 9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3qd2_B 9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK-LEHPGIVRYFNAWLETPPEKWQEEMDE 87 (332)
T ss_dssp EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTS-CCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHh-CCCCCEeeEEEEEEEeccchhhhhhhh
Confidence 34456789999999999998899999999986433 2334567888888887 69999999999986543
Q ss_pred -----------------------------------------------eeEEEEEccCCCCHHHHHHc------CCHHHHH
Q 002105 755 -----------------------------------------------AAYLVYEYIEGKELSEVLRN------LSWERRR 781 (966)
Q Consensus 755 -----------------------------------------------~~~lv~Ey~~~g~L~~~l~~------l~~~~~~ 781 (966)
..++|||||++|+|.++++. .++..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 167 (332)
T 3qd2_B 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167 (332)
T ss_dssp --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence 37999999999999999963 6777889
Q ss_pred HHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC------------------CCcCCccc
Q 002105 782 KVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS------------------KSINSSAY 843 (966)
Q Consensus 782 ~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~y 843 (966)
.++.||+.||+||| +.+|+||||||+||+++.+. .++++|||.+..... ...||+.|
T Consensus 168 ~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCC--CEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 99999999999999 45899999999999999654 578999999765322 23589999
Q ss_pred ccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHH
Q 002105 844 VAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIM 923 (966)
Q Consensus 844 ~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 923 (966)
+|||++.+..++.++|||||||++|||+||..|+.. .. +..... ..... |. .......++.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~---~~~~~~-~~~~~-----~~------~~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RV---RIITDV-RNLKF-----PL------LFTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HH---HHHHHH-HTTCC-----CH------HHHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HH---HHHHHh-hccCC-----Cc------ccccCChhHH
Confidence 999999999999999999999999999999877421 11 111110 01100 00 0122234557
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 002105 924 NLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 924 ~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+++.+|++.||++|||++|+++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCCCCcCCCHHHHhh
Confidence 7889999999999999999875
No 136
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.4e-35 Score=320.26 Aligned_cols=252 Identities=21% Similarity=0.300 Sum_probs=184.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+...++..||||++...... ..+.+.+|+..+.+ ++|||||++++++.+++..++||||+
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhc-CCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 3445678999999999999889999999998654322 22456778877777 69999999999999999999999999
Q ss_pred CCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
++ ++.+++. .+++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 84 ~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 84 DQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp SE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTS--CEEECCCTTCEECCSCCSC
T ss_pred CC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCC--CEEEeecccceecCCcccc
Confidence 96 5555543 48999999999999999999994 5899999999999999654 57899999986432
Q ss_pred -CCCcCCcccccccccCCCC-CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc-------
Q 002105 835 -SKSINSSAYVAPETKESKD-ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD------- 905 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------- 905 (966)
....+|+.|+|||++.+.. ++.++|||||||++|||+||..|+.......+......+. ........|..
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL-LGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHH-HCCCCTTTCTTGGGSTTC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH-hCCCChhhhhhhcccccc
Confidence 2346799999999987765 7999999999999999999988865433322222222221 11100000000
Q ss_pred -c--c---ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 906 -P--F---IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 906 -~--~---~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ . .............++.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0 00000000011234567888999999999999999875
No 137
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3e-35 Score=324.58 Aligned_cols=244 Identities=20% Similarity=0.331 Sum_probs=183.9
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++||||+++++++..++..++||||
T Consensus 35 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 113 (310)
T 2wqm_A 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ-LNHPNVIKYYASFIEDNELNIVLEL 113 (310)
T ss_dssp EEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCcEEEEEec
Confidence 445567899999999999988999999999864322 223457788888777 6999999999999999999999999
Q ss_pred cCCCCHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 763 IEGKELSEVLRN-------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
+++|+|.+++.. +++..+..++.|+++||+||| ..+|+||||||+||+++.+. .+++.|||.+....
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~--~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSS 188 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEECCC--------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCC--CEEEEeccceeeecC
Confidence 999999999863 889999999999999999999 45899999999999998654 57899999875422
Q ss_pred -----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105 835 -----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 835 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
....+++.|+|||++.+..++.++|||||||++|||+||+.||...........+... . ... .+...
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~-~~~----~~~~~ 260 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE---Q-CDY----PPLPS 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH---T-TCS----CCCCT
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh---c-ccC----CCCcc
Confidence 2235789999999999999999999999999999999999998754322211111111 1 111 11111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
..++ .++.+++.+||+.||++|||++||++.|++
T Consensus 261 ~~~~------~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 261 DHYS------EELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp TTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cccC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1122 256678889999999999999999999998
No 138
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.8e-35 Score=343.40 Aligned_cols=243 Identities=19% Similarity=0.301 Sum_probs=188.5
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKE 767 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~ 767 (966)
...+|+|+||.||+|+. ..+..||||++.... ...++|.+|+..+.+ ++|||||++++++.+ +..++|||||++|+
T Consensus 189 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~-~~~~iv~e~~~~gs 264 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTW-NGTTRVAIKTLKPGT-MSPEAFLQEAQVMKK-LRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEECSSCEEEEEEE-TTTEEEEEEECCTTS-SCHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEE-CCCceEEEEEeccCC-CCHHHHHHHHHHHHh-CCCCCEeeEEEEEcC-CceEEEehhhcCCC
Confidence 34578899999999998 566789999876433 334578888888877 699999999999976 67899999999999
Q ss_pred HHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------C
Q 002105 768 LSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------S 835 (966)
Q Consensus 768 L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------~ 835 (966)
|.++++ .+++.++..++.|||.||+||| +.+|+||||||+|||++.+ ..++++|||++.... .
T Consensus 265 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~~~~~~~~ 339 (452)
T 1fmk_A 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDNEYTARQ 339 (452)
T ss_dssp HHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG--GCEEECCCCTTC-----------
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCC--CCEEECCCccceecCCCceeccc
Confidence 999995 2899999999999999999999 4589999999999999865 457899999986422 1
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
...+++.|+|||.+.+..++.++|||||||++|||+| |+.||.+.. ...+.+.+. ..... .....++
T Consensus 340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~---~~~~~------~~~~~~~- 407 (452)
T 1fmk_A 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVE---RGYRM------PCPPECP- 407 (452)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH---TTCCC------CCCTTSC-
T ss_pred CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC------CCCCCCC-
Confidence 2345678999999988899999999999999999999 999987532 111212221 11111 0111222
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCc
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISSC 956 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~~ 956 (966)
.++.+++.+||+.||++|||+++|++.|++++.....
T Consensus 408 -----~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 408 -----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred -----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 2566788899999999999999999999996554433
No 139
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=330.14 Aligned_cols=248 Identities=22% Similarity=0.254 Sum_probs=191.0
Q ss_pred ccccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
......+|+|++|.||+|+.. .++..||||++.... ....+.+.+|+..+.++-+|||||++++++..++..++
T Consensus 47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 126 (344)
T 1rjb_A 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL 126 (344)
T ss_dssp EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEE
Confidence 344556799999999999973 355689999986432 23345678888888873389999999999999999999
Q ss_pred EEEccCCCCHHHHHHc--------------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcE
Q 002105 759 VYEYIEGKELSEVLRN--------------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKV 812 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~--------------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Ni 812 (966)
||||+++|+|.++++. ++|..+..++.||+.||+||| ..+|+||||||+||
T Consensus 127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NI 203 (344)
T 1rjb_A 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNV 203 (344)
T ss_dssp EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGE
T ss_pred EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhE
Confidence 9999999999999963 689999999999999999999 45999999999999
Q ss_pred EEcCCCCceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCc
Q 002105 813 IVDGKDEPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGV 883 (966)
Q Consensus 813 ll~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~ 883 (966)
+++.+ ..++++|||.+.... ....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......
T Consensus 204 ll~~~--~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 204 LVTHG--KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp EEETT--TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred EEcCC--CcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 99865 468999999885421 12345778999999988899999999999999999998 99999764322
Q ss_pred hhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 884 HESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.......... ..+......+ .++.+++.+||+.||++|||+.||++.|+..+..
T Consensus 282 -~~~~~~~~~~---------~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 282 -ANFYKLIQNG---------FKMDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp -HHHHHHHHTT---------CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -HHHHHHHhcC---------CCCCCCCCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 2221222211 0111111111 2566788899999999999999999999985443
No 140
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=327.55 Aligned_cols=232 Identities=16% Similarity=0.200 Sum_probs=187.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--------cccchHHHHHHHHhhcCCCceeEEeeEEecCCee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--------TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAA 756 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--------~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~ 756 (966)
+.....+|+|++|.||+|+...++..||||++...... ..+.+.+|+..+.+ ++|||||++++++.+++..
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~Iv~~~~~~~~~~~~ 104 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR-VEHANIIKVLDIFENQGFF 104 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTT-CCCTTBCCEEEEEECSSEE
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHh-CCCCCEeeEEEEEeeCCEE
Confidence 34556679999999999999899999999998754321 23467788888887 6999999999999999999
Q ss_pred EEEEEccCCC-CHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 757 YLVYEYIEGK-ELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 757 ~lv~Ey~~~g-~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
++||||+.+| +|.++++ .+++..+..++.|++.||+||| ..+|+||||||+||+++.+. .++++|||.+..
T Consensus 105 ~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~a~~ 179 (335)
T 3dls_A 105 QLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAY 179 (335)
T ss_dssp EEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTS--CEEECCCTTCEE
T ss_pred EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCC--cEEEeecccceE
Confidence 9999999877 9999996 4899999999999999999999 45899999999999998654 578999999865
Q ss_pred cCC-----CCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 833 TDS-----KSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 833 ~~~-----~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... +. .. ... ..|
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~--------~~-~~~---~~~ 244 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE---ET--------VE-AAI---HPP 244 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG---GG--------TT-TCC---CCS
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH---HH--------Hh-hcc---CCC
Confidence 322 2358999999999988877 789999999999999999999986421 00 00 000 001
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
...+ .++.+++.+|++.||++|||++|+++.
T Consensus 245 ---~~~~------~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 245 ---YLVS------KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---SCCC------HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---cccC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 246678889999999999999999864
No 141
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2e-35 Score=328.54 Aligned_cols=248 Identities=19% Similarity=0.285 Sum_probs=189.6
Q ss_pred ccccccCCCCCccEEEEEE-----EecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVR-----SLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~-----~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
+.....+|+|++|.||+|+ ...++..||||++.... .....++.+|+..+.+ ++|||||++++++..++..|+
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~l 110 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIVRCIGVSLQSLPRFI 110 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEE
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhh-CCCCCCCeEEEEEcCCCCcEE
Confidence 4455668999999999998 44677899999985432 2234467888888877 699999999999999999999
Q ss_pred EEEccCCCCHHHHHHc----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEecc
Q 002105 759 VYEYIEGKELSEVLRN----------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVP 827 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~----------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~ 827 (966)
||||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+. ...++++||
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECcc
Confidence 9999999999999962 789999999999999999999 45899999999999998543 345789999
Q ss_pred ccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccC
Q 002105 828 GLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDC 898 (966)
Q Consensus 828 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 898 (966)
|.+... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... ...+.+++. ...
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~---~~~ 262 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFVT---SGG 262 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH---TTC
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHHHHHHh---cCC
Confidence 987531 122356889999999988899999999999999999999 999986532 222222221 111
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 899 HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 899 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
. +.....++ .++.+++.+||+.||++||++.||++.|+.+...
T Consensus 263 ~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 263 R------MDPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp C------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C------CCCCCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1 00111122 2566788899999999999999999999985443
No 142
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-35 Score=319.62 Aligned_cols=239 Identities=23% Similarity=0.332 Sum_probs=184.8
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
....+|+|++|.||+++...++..||+|++..... ...+.+.+|+..+.+ ++|||||++++++.+.+..++||||+++
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 104 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS-LDHPNIIKIFEVFEDYHNMYIVMETCEG 104 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCSC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHh-CCCchHHhHHHheecCCeEEEEEEeCCC
Confidence 34457889999999999988999999999875432 234567788888777 6999999999999999999999999999
Q ss_pred CCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-CCceEEEeccccceec----
Q 002105 766 KELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK-DEPHLRLSVPGLAYCT---- 833 (966)
Q Consensus 766 g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~-~~~~~~~~~~~~~~~~---- 833 (966)
|+|.+++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.+ ....++++|||.+...
T Consensus 105 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 105 GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99999883 4899999999999999999999 4589999999999999653 3456899999988542
Q ss_pred -CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 -DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
.....||+.|+|||.+. ..++.++|||||||++|||++|+.||.... .......... ....... . ....
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~--~~~~~~~~~~--~~~~~~~----~-~~~~ 251 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS--LEEVQQKATY--KEPNYAV----E-CRPL 251 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH--CCCCCCC-------CCC
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC--HHHHHhhhcc--CCccccc----c-cCcC
Confidence 23346899999999886 568999999999999999999999997532 1111111111 1100000 0 0011
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
. .++.+++.+|++.||++|||+.||++
T Consensus 252 ---~---~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 252 ---T---PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---C---HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---C---HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 24567888999999999999999975
No 143
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-34 Score=328.39 Aligned_cols=348 Identities=16% Similarity=0.131 Sum_probs=211.0
Q ss_pred CCCCCCCCCCCc-ccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECC
Q 002105 40 LSNWDSSVTFCK-WNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLS 118 (966)
Q Consensus 40 l~~w~~~~~~c~-w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls 118 (966)
+++|....+||. |.+..|.... +.+............-..++++++|++++|.+. .+|..++..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~----~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYD----VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEES----CEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceee----eeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECC
Confidence 578987767774 4444442111 111221112222223345789999999999997 7999888888999999999
Q ss_pred CCCCCCCC--CCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccC
Q 002105 119 NNNFTGPV--PIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSI 196 (966)
Q Consensus 119 ~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 196 (966)
+|.+++.. .++.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+....+..|.++++|++|++++|.+.+..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 99887643 3577888888888888888777777888888888888888877544444677778888888877777766
Q ss_pred CcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCC
Q 002105 197 PREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLK 276 (966)
Q Consensus 197 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 276 (966)
|..+..+++|++|++++|.+++. .++.+++|++|++++|.+++. ...++|++|++++|.+... |.. ..+
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~ 226 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNV 226 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCS
T ss_pred hhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccc
Confidence 66777777777777777777643 245566677777776666532 2223556666666655432 221 124
Q ss_pred CCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEcc
Q 002105 277 SLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLS 356 (966)
Q Consensus 277 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls 356 (966)
+|+.|++++|.+++. ..+..+ ++|++|++++|.+++..|..+..+++|+.|+|+
T Consensus 227 ~L~~L~l~~n~l~~~--~~l~~l------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (390)
T 3o6n_A 227 ELTILKLQHNNLTDT--AWLLNY------------------------PGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280 (390)
T ss_dssp SCCEEECCSSCCCCC--GGGGGC------------------------TTCSEEECCSSCCCEEESGGGTTCSSCCEEECC
T ss_pred cccEEECCCCCCccc--HHHcCC------------------------CCccEEECCCCcCCCcChhHccccccCCEEECC
Confidence 455555555555432 334444 444455555554444444444445555555555
Q ss_pred CCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCC
Q 002105 357 TNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSG 434 (966)
Q Consensus 357 ~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~ 434 (966)
+|.+++ +|..+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++... +..+++|+.|++++|.++.
T Consensus 281 ~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp SSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEH
T ss_pred CCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccc
Confidence 555443 2333344455555555555555 34445566667777777777766542 5566777777777777764
No 144
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.2e-35 Score=320.63 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=184.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+. .+|..||+|++..... ...+.+.+|+..+.+ ++|||||++++++.+++..++||||+
T Consensus 24 ~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~ 101 (311)
T 3niz_A 24 QKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKE-LHHPNIVSLIDVIHSERCLTLVFEFM 101 (311)
T ss_dssp EEEEEEEECSSCEEEEEEE-TTSCEEEEEEEC------CHHHHHHHHHHHHHH-CCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred HhhhhccCCCCeEEEEEEE-CCCCEEEEEEEecccccchhhHHHHHHHHHHHH-cCCCCEeeeeeEEccCCEEEEEEcCC
Confidence 4455679999999999998 6799999999854322 123457788888877 69999999999999999999999999
Q ss_pred CCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+ |+|.+++.. +++.....++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 102 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 102 E-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDG--ALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp S-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEETTSCCC-
T ss_pred C-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCC--CEEEccCcCceecCCCccc
Confidence 9 588888753 889999999999999999999 45999999999999998664 57899999986532
Q ss_pred -CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccc--------
Q 002105 835 -SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWV-------- 904 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 904 (966)
....+|+.|+|||++.+ ..++.++||||+||++|||+||+.||.+.... +....... .........|.
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~-~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQLPKIFS-ILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-THHHHHHH-HHCCCCTTTSGGGTTSHHH
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-HHCCCChHHhhhhhccchh
Confidence 23467999999999876 56899999999999999999999999764332 22212111 11110000000
Q ss_pred -cccccCCCc-chH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 905 -DPFIRGHVS-SIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 905 -d~~~~~~~~-~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+........ ... ....++.+++.+|++.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000000 000 01135677889999999999999999875
No 145
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.7e-35 Score=328.65 Aligned_cols=237 Identities=23% Similarity=0.327 Sum_probs=185.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...++..||||++....... .+.+.+|+..+.+ ++|||||+++++|..++..++||||
T Consensus 57 ~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCeEEEEEec
Confidence 34456799999999999998899999999986543222 2457788888877 6999999999999999999999999
Q ss_pred cCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--CCC
Q 002105 763 IEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--DSK 836 (966)
Q Consensus 763 ~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--~~~ 836 (966)
++ |+|.+++. .+++..+..++.|+++||+|||. .+|+||||||+||+++.+ ..++++|||.+... ...
T Consensus 136 ~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 136 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp CS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSSSBCC
T ss_pred CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCC--CCEEEeeccCceecCCCCc
Confidence 98 68888774 48999999999999999999994 489999999999999965 46899999988643 234
Q ss_pred CcCCcccccccccC---CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccc-cCCC
Q 002105 837 SINSSAYVAPETKE---SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI-RGHV 912 (966)
Q Consensus 837 ~~~~~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 912 (966)
..||+.|+|||++. ...++.++|||||||++|||+||+.||.... ....+.... ... .|.. ....
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-~~~~~~~~~----~~~------~~~~~~~~~ 278 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIA----QNE------SPALQSGHW 278 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHH----HSC------CCCCCCTTS
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHH----hcC------CCCCCCCCC
Confidence 57899999999873 5678999999999999999999999986532 111111111 111 1111 1112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
+ + ++.+++.+||+.||++|||++|+++.
T Consensus 279 ~---~---~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 279 S---E---YFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp C---H---HHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred C---H---HHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2 2 45667789999999999999998753
No 146
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.7e-35 Score=334.65 Aligned_cols=189 Identities=18% Similarity=0.234 Sum_probs=158.3
Q ss_pred cccccCCCC--CccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 686 ENLTSRGKK--GVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 686 ~~~~~~g~~--g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
.....+|+| |+|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+|||
T Consensus 28 ~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 28 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKL-FNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHh-CCCCCCCcEeEEEEECCEEEEEEE
Confidence 334456677 999999999988999999999865422 122345567766666 799999999999999999999999
Q ss_pred ccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---
Q 002105 762 YIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--- 833 (966)
Q Consensus 762 y~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--- 833 (966)
||++|+|.+++. .+++..+..++.||+.||+||| +.+|+||||||+|||++.+. .++++|||.+...
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~--~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISH 181 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC--CEEECCGGGCEECEET
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCC--CEEEcccccceeeccc
Confidence 999999999985 3889999999999999999999 45899999999999998654 5788899876421
Q ss_pred ----------CCCCcCCcccccccccCC--CCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 834 ----------DSKSINSSAYVAPETKES--KDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 834 ----------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
.....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+.
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 122368889999999887 67999999999999999999999999754
No 147
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.5e-35 Score=336.32 Aligned_cols=242 Identities=20% Similarity=0.235 Sum_probs=185.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
......+|+|+||.||+|+...+++.||+|++.... ......+.+|...+.+ ++|||||+++++|.+++..|+|||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~-~~hp~Iv~l~~~~~~~~~~~lV~E 154 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLHYAFQDDNNLYLVMD 154 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHH-SCTTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEeeCCEEEEEEe
Confidence 455667899999999999998889999999986532 2233446777777766 799999999999999999999999
Q ss_pred ccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----
Q 002105 762 YIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---- 833 (966)
Q Consensus 762 y~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---- 833 (966)
||+||+|.++++. +++.....++.||+.||+||| +.+||||||||+|||+|.++ .++++|||++...
T Consensus 155 y~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g--~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 155 YYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDG 229 (437)
T ss_dssp CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCC--CEEEcchhhhhhcccCC
Confidence 9999999999963 889999999999999999999 45899999999999999654 5799999988542
Q ss_pred ---CCCCcCCcccccccccC-----CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc
Q 002105 834 ---DSKSINSSAYVAPETKE-----SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD 905 (966)
Q Consensus 834 ---~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 905 (966)
....+||+.|||||++. ...|+.++|||||||++|||+||+.||.+... .+........ ..... -
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~-~~~~~-----~ 302 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-VETYGKIMNH-KERFQ-----F 302 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTH-HHHCC-----C
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-hHHHHhhhhc-ccccc-----C
Confidence 12357999999999986 56789999999999999999999999975421 1111111100 00000 0
Q ss_pred ccccCCCcchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 002105 906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTA--RPCASDVTK 945 (966)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~--RPt~~~v~~ 945 (966)
|...... .+ ++.+++.+|++.+|++ ||+++|+++
T Consensus 303 p~~~~~~---s~---~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 303 PTQVTDV---SE---NAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CSSCCCS---CH---HHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CcccccC---CH---HHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111112 22 4556667888888887 999999874
No 148
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.9e-35 Score=328.25 Aligned_cols=246 Identities=18% Similarity=0.260 Sum_probs=181.3
Q ss_pred cccccCCCCCccEEEEEEEecCCc---EEEEEEEecc--CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCee----
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDM---QFVVKKIIDV--NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAA---- 756 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~---~vavk~~~~~--~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~---- 756 (966)
.....+|+|++|.||+|+...++. .||||++... .....+.+.+|+..+.+ ++|||||++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE-FDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTT-CCCTTBCCCCEEEECC-------
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHH-CCCCceehhhceeeccccccCCC
Confidence 344567899999999999866654 7999987543 22334567888888877 6999999999999877655
Q ss_pred --EEEEEccCCCCHHHHHH---------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEe
Q 002105 757 --YLVYEYIEGKELSEVLR---------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLS 825 (966)
Q Consensus 757 --~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~ 825 (966)
++||||+++|+|.+++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.+. .++++
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~--~~kl~ 179 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDM--TVCVA 179 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTS--CEEEC
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCC--CEEEe
Confidence 99999999999999985 3899999999999999999999 45899999999999998664 57899
Q ss_pred ccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhc
Q 002105 826 VPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYS 896 (966)
Q Consensus 826 ~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 896 (966)
|||.+.... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||..... .+.. .... .
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-~~~~-~~~~---~ 254 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEIY-NYLI---G 254 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-GGHH-HHHH---T
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-HHHH-HHHh---c
Confidence 999885421 12345778999999999999999999999999999999 8999875422 1111 1111 1
Q ss_pred cCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 897 DCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 897 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
.... ......+ .++.+++.+|++.||++|||+.|+++.|++++...
T Consensus 255 ~~~~------~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 255 GNRL------KQPPECM------EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp TCCC------CCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred CCCC------CCCCccC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1110 0111111 35677889999999999999999999999976653
No 149
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=334.70 Aligned_cols=260 Identities=15% Similarity=0.181 Sum_probs=194.6
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc-cccchHHHHHHHHhhcCCCceeEEeeEEecCC--eeEEEEEcc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI-TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK--AAYLVYEYI 763 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~-~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~--~~~lv~Ey~ 763 (966)
....+|+|++|.||+|+...+|..||||++...... ..+.+.+|+..+.+ ++|||||++++++...+ ..++|||||
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~~~lv~e~~ 91 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK-LNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHH-CCCTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHh-cCCCCCCeEEEeeccCCCCeeEEEEecC
Confidence 344578999999999999888999999998654322 23456778877777 69999999999998755 789999999
Q ss_pred CCCCHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEE--cCCCCceEEEeccccceecC-
Q 002105 764 EGKELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIV--DGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 764 ~~g~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill--~~~~~~~~~~~~~~~~~~~~- 834 (966)
++|+|.++++. +++..+..++.||+.||+||| +.+|+||||||+||++ +.+....++++|||.+....
T Consensus 92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 99999999963 899999999999999999999 4589999999999998 22245568999999986532
Q ss_pred ----CCCcCCcccccccccCC--------CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc---hhhHHHHHHHhhccCc
Q 002105 835 ----SKSINSSAYVAPETKES--------KDITEKGDIYGFGLILIDLLTGKSPADADFGV---HESIVEWARYCYSDCH 899 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~ 899 (966)
....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... .+.+....... +...
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-p~~~ 247 (396)
T 4eut_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK-PSGA 247 (396)
T ss_dssp GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC-CTTC
T ss_pred CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC-Cccc
Confidence 23468999999998764 56788999999999999999999998653221 12221211111 0000
Q ss_pred cc----------ccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 900 LD----------TWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 900 ~~----------~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.. .|.+ .+.....-.......+.+++.+|++.||++||+++|+++.+++++.
T Consensus 248 ~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 248 ISGVQKAENGPIDWSG-DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CEEEECSTTCCEEEES-SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred chhheeccCCCcccCc-cCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 00 0100 1111111113344566788899999999999999999999998654
No 150
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.2e-35 Score=320.69 Aligned_cols=248 Identities=18% Similarity=0.285 Sum_probs=187.9
Q ss_pred cccccCCCCCccEEEEEE----EecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecC--CeeEE
Q 002105 686 ENLTSRGKKGVSSSYKVR----SLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE--KAAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~----~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~--~~~~l 758 (966)
.....+|+|++|.||+|+ ...++..||||++..... ...+.+.+|+..+.+ ++||||+++++++..+ +..++
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN-LYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHT-CCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHh-CCCCCeeeeeeEEecCCCceEEE
Confidence 445567999999999998 456889999999864432 223557788888777 6999999999999876 66899
Q ss_pred EEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 759 VYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
||||+++|+|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 103 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIE 177 (302)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT--EEEECCCTTCEECC
T ss_pred EEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCC--CEEECccccccccc
Confidence 999999999999994 4899999999999999999999 45899999999999998654 68899999876422
Q ss_pred ---------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCC----------chhhHHHHHHHhh
Q 002105 835 ---------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFG----------VHESIVEWARYCY 895 (966)
Q Consensus 835 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~----------~~~~~~~~~~~~~ 895 (966)
....+|+.|+|||.+.+..++.++|||||||++|||+||+.|+..... .............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 234577889999999988999999999999999999999998642110 0000101111111
Q ss_pred ccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 896 SDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 896 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
... ........+ .++.+++.+||+.||++|||++||+++|++++
T Consensus 258 ~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK------RLPCPPNCP------DEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC------CCCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC------CCCCCCCCC------HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 110 000111111 35677888999999999999999999999854
No 151
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=9.5e-35 Score=316.18 Aligned_cols=242 Identities=23% Similarity=0.297 Sum_probs=189.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|....++..||+|++..... ...+.+.+|+..+.+ ++||||+++++++..++..++||||+
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK-LQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHH-cCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 344567899999999999988899999999865432 223456677777777 69999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC-ceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE-PHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~-~~~~~~~~~~~~~~~----- 834 (966)
++|+|.+++. .+++..+..++.|++.||+||| ..+|+||||||+||+++.+.. ..++++|||.+....
T Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (284)
T 3kk8_A 88 TGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164 (284)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence 9999998885 3899999999999999999999 458999999999999986543 458899999986532
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ........... ... ...+.. ...+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~----~~~-~~~~~~-~~~~- 235 (284)
T 3kk8_A 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAG----AYD-YPSPEW-DTVT- 235 (284)
T ss_dssp CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT----CCC-CCTTTT-TTSC-
T ss_pred cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--hhHHHHHHHhc----ccc-CCchhh-cccC-
Confidence 23468999999999999999999999999999999999999986532 11111111110 000 011110 1111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 236 -----~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 236 -----PEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 24667888999999999999999986
No 152
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.2e-34 Score=345.29 Aligned_cols=347 Identities=18% Similarity=0.167 Sum_probs=222.4
Q ss_pred CCCCCCCCCCCCc----ccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcE
Q 002105 39 FLSNWDSSVTFCK----WNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRF 114 (966)
Q Consensus 39 ~l~~w~~~~~~c~----w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~ 114 (966)
.+++|..+.+||. |.++.|+. + ++-..... .....-..+++++.|++++|.+. .+|+.++..+++|++
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~--~---i~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~ 79 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDV--H---IDMQTQDV--YFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVEL 79 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSC--E---ECSSCCCC--EESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSE
T ss_pred cccCCCCCCcCcccCcCceeEecCc--e---eccccccc--ccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcE
Confidence 4678987767774 66666542 1 11111111 11122235788999999999997 789988888889999
Q ss_pred EECCCCCCCCCC--CCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCC
Q 002105 115 LNLSNNNFTGPV--PIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQL 192 (966)
Q Consensus 115 L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l 192 (966)
|+|++|.+++.. .++.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+..+..|+++++|++|++++|.+
T Consensus 80 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l 159 (597)
T 3oja_B 80 LNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNL 159 (597)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcC
Confidence 999988888644 357778888888888888877777778888888888888877755555567777777777777777
Q ss_pred cccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhh
Q 002105 193 IGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSI 272 (966)
Q Consensus 193 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l 272 (966)
++..|..|+.+++|++|+|++|.+++. .++.+++|++|++++|.+++. ...++|++|++++|.++...+ .+
T Consensus 160 ~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~-~~ 230 (597)
T 3oja_B 160 ERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRG-PV 230 (597)
T ss_dssp CBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEEC-SC
T ss_pred CCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccc-cc
Confidence 776666777777777777777776643 244556666666666665532 222345555555555442211 11
Q ss_pred hcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcE
Q 002105 273 LGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTV 352 (966)
Q Consensus 273 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~ 352 (966)
.++|+.|++++|.+++ +.++..+++|+.|+|++|.+++..|..|+.+++|+.
T Consensus 231 --------------------------~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 282 (597)
T 3oja_B 231 --------------------------NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 282 (597)
T ss_dssp --------------------------CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCE
T ss_pred --------------------------CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCE
Confidence 1345555555555543 234555555555555555555555555555566666
Q ss_pred EEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCC
Q 002105 353 IDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDL 432 (966)
Q Consensus 353 L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l 432 (966)
|+|++|.+++ +|..+..+++|+.|++++|.++ .+|..+..+++|+.|+|++|++++.. +..++.|+.|++++|.+
T Consensus 283 L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~ 357 (597)
T 3oja_B 283 LYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDW 357 (597)
T ss_dssp EECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCE
T ss_pred EECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCC
Confidence 6666666554 3444455566666666666666 45666677777888888888777653 55677888888888887
Q ss_pred CCc
Q 002105 433 SGR 435 (966)
Q Consensus 433 ~~~ 435 (966)
.+.
T Consensus 358 ~~~ 360 (597)
T 3oja_B 358 DCN 360 (597)
T ss_dssp EHH
T ss_pred CCh
Confidence 754
No 153
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.1e-35 Score=325.78 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=190.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhh-cCCCceeEEeeEEecCC----eeEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKL-IMHPNIVRLHGVCRSEK----AAYLVY 760 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~-~~H~niv~l~g~~~~~~----~~~lv~ 760 (966)
.....+|+|++|.||+++. ++..||||++... ..+.+..|++.+... ++|||||++++++..++ ..++||
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~ 119 (342)
T 1b6c_B 45 VLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 119 (342)
T ss_dssp EEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred EEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence 4445678899999999986 5889999998533 234566676665543 68999999999998876 789999
Q ss_pred EccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105 761 EYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHC-----SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 761 Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~-----~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~ 833 (966)
||+++|+|.++++. ++|..+..++.|++.||+|||... ..+|+||||||+||+++.+. .++++|||.+...
T Consensus 120 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~ 197 (342)
T 1b6c_B 120 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRH 197 (342)
T ss_dssp CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS--CEEECCCTTCEEE
T ss_pred eecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC--CEEEEECCCceec
Confidence 99999999999974 899999999999999999999421 45899999999999998765 5789999987542
Q ss_pred C----------CCCcCCcccccccccCCC------CCCCcchHHHHHHHHHHHHcC----------CCCCCCCCCchhhH
Q 002105 834 D----------SKSINSSAYVAPETKESK------DITEKGDIYGFGLILIDLLTG----------KSPADADFGVHESI 887 (966)
Q Consensus 834 ~----------~~~~~~~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~el~tg----------~~p~~~~~~~~~~~ 887 (966)
. ....||+.|+|||++.+. .++.++|||||||++|||+|| +.||..........
T Consensus 198 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 277 (342)
T 1b6c_B 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 277 (342)
T ss_dssp ETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccH
Confidence 1 234689999999998765 334689999999999999999 67776543222222
Q ss_pred HHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 888 VEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 888 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.++........ ..|.+..... ..+....+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 278 ~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 278 EEMRKVVCEQK-----LRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp HHHHHHHTTSC-----CCCCCCGGGG-TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCCccccc-chhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 22222221111 1121111111 12445578889999999999999999999999999544
No 154
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.7e-35 Score=340.68 Aligned_cols=238 Identities=22% Similarity=0.273 Sum_probs=182.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEecc---CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV---NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~---~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|+||.||+|+...+|..||||++... .......+.+|+..+.+ ++|||||+++++|..++..|+|||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~l~~~~~~~~~~~lv~e 228 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVME 228 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCC-CSCTTSCCEEEEEEETTEEEEEEC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHh-CCCCeEeeEEEEEeeCCEEEEEEe
Confidence 34556689999999999999899999999998643 22233456677766666 799999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
||++|+|.+++. .+++..+..++.||+.||+|||.. .+||||||||+|||++.+. .++++|||++...
T Consensus 229 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 229 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp CCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSS--CEEECCCCCCCTTCC---
T ss_pred eCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCC--CEEEccCCCceeccCCCc
Confidence 999999999986 389999999999999999999941 5899999999999999754 5789999987541
Q ss_pred -CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 834 -DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 834 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.... .....+.+.. ... .+....
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~--~~~--------~~p~~~ 372 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HEKLFELILM--EEI--------RFPRTL 372 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH--CCC--------CCCTTS
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--HHHHHHHHHh--CCC--------CCCccC
Confidence 234578999999999999999999999999999999999999997532 2212121111 010 011112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARP-----CASDVTK 945 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~~ 945 (966)
+ .++.+++.+|++.||++|| +++|+++
T Consensus 373 ~------~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 373 G------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp C------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C------HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 2 2466788899999999999 9998874
No 155
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.1e-35 Score=316.51 Aligned_cols=239 Identities=19% Similarity=0.219 Sum_probs=187.4
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKE 767 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~ 767 (966)
...+|+|++|.||+|+...++..||+|++........+.+.+|+..+.+ ++|||||++++++.+++..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS-LDHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 3456889999999999988899999999976555555678888888877 699999999999999999999999999999
Q ss_pred HHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecC-----CCCc
Q 002105 768 LSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTD-----SKSI 838 (966)
Q Consensus 768 L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~-----~~~~ 838 (966)
|.+++. .+++..+..++.|++.||+||| +.+|+||||||+||++.. +....++++|||.+.... ....
T Consensus 93 L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 169 (277)
T 3f3z_A 93 LFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 169 (277)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCC
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccC
Confidence 999885 3899999999999999999999 458999999999999932 134568899999886422 2346
Q ss_pred CCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHH
Q 002105 839 NSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNE 918 (966)
Q Consensus 839 ~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 918 (966)
+|+.|+|||.+.+. ++.++||||||+++|||+||+.||..... .+....... . ... ..+......
T Consensus 170 ~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~----~-~~~--~~~~~~~~~------ 234 (277)
T 3f3z_A 170 GTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD-SEVMLKIRE----G-TFT--FPEKDWLNV------ 234 (277)
T ss_dssp SCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH----C-CCC--CCHHHHTTS------
T ss_pred CCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHh----C-CCC--CCchhhhcC------
Confidence 89999999998764 89999999999999999999999975321 111111111 0 000 000000011
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 919 IVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 919 ~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..++.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 235 SPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 135667888999999999999999974
No 156
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.8e-35 Score=317.74 Aligned_cols=236 Identities=20% Similarity=0.338 Sum_probs=187.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec-------------
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------------- 752 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------------- 752 (966)
.....+|+|++|.||+|+...++..||+|++... .+.+.+|+..+.+ ++||||+++++++..
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAK-LDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp EEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHH-CCCTTBCCEEEEEEEEEEC---------
T ss_pred ceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHh-CCCCCEEEEeeeEeccccCccccccccc
Confidence 3445578889999999999779999999998643 2467788888877 699999999999864
Q ss_pred ---CCeeEEEEEccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEE
Q 002105 753 ---EKAAYLVYEYIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRL 824 (966)
Q Consensus 753 ---~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~ 824 (966)
.+..++||||+++|+|.++++ .+++..+..++.|++.||+|||. .+|+||||||+||+++.+ ..+++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~--~~~kl 163 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDT--KQVKI 163 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEET--TEEEE
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCC--CCEEE
Confidence 445899999999999999995 38899999999999999999994 589999999999999865 46889
Q ss_pred eccccceecC-----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc
Q 002105 825 SVPGLAYCTD-----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH 899 (966)
Q Consensus 825 ~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 899 (966)
+|||.+.... ....+|+.|+|||.+.+..++.++|||||||++|||+||..|+... . ++.... ...
T Consensus 164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~---~~~~~~-~~~- 234 (284)
T 2a19_B 164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----S---KFFTDL-RDG- 234 (284)
T ss_dssp CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----H---HHHHHH-HTT-
T ss_pred CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----H---HHHHHh-hcc-
Confidence 9999876532 2346899999999999999999999999999999999999886321 1 111111 111
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 900 LDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 900 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
.+...++ . ++.+++.+|++.||++|||+.|+++.|+. ++..
T Consensus 235 -------~~~~~~~---~---~~~~li~~~l~~dp~~Rps~~e~l~~l~~-~~~~ 275 (284)
T 2a19_B 235 -------IISDIFD---K---KEKTLLQKLLSKKPEDRPNTSEILRTLTV-WKKS 275 (284)
T ss_dssp -------CCCTTSC---H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHH-HTC-
T ss_pred -------cccccCC---H---HHHHHHHHHccCChhhCcCHHHHHHHHHH-HhhC
Confidence 1111122 2 45677889999999999999999999998 4443
No 157
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.4e-35 Score=327.63 Aligned_cols=246 Identities=18% Similarity=0.236 Sum_probs=191.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCc-----EEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDM-----QFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~-----~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
......+|+|++|.||+|.....+. .||+|++..... ...+.+.+|+..+.++-+|||||+++++|..++..++
T Consensus 48 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 127 (333)
T 2i1m_A 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127 (333)
T ss_dssp EEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEE
Confidence 3445567899999999999865554 799998865432 2334577888888773389999999999999999999
Q ss_pred EEEccCCCCHHHHHHc-----------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCce
Q 002105 759 VYEYIEGKELSEVLRN-----------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPH 821 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~-----------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~ 821 (966)
||||+++|+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+ ..
T Consensus 128 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~--~~ 202 (333)
T 2i1m_A 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG--HV 202 (333)
T ss_dssp EEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG--GE
T ss_pred EEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC--Ce
Confidence 9999999999999852 5889999999999999999994 589999999999999854 46
Q ss_pred EEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHH
Q 002105 822 LRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWAR 892 (966)
Q Consensus 822 ~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 892 (966)
++++|||.+.... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... ....+...
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~ 281 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVK 281 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHHh
Confidence 8899999886421 22345778999999988899999999999999999999 99998754322 22212222
Q ss_pred HhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 893 YCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 893 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
.... +......+ .++.+++.+||+.||.+|||+.||++.|++..
T Consensus 282 ~~~~---------~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 282 DGYQ---------MAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HTCC---------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCC---------CCCCCCCC------HHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 1110 00111111 25667888999999999999999999999844
No 158
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-34 Score=319.48 Aligned_cols=248 Identities=20% Similarity=0.304 Sum_probs=185.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+++...++..||+|++....... .+.+.+|+..+.+ ++||||+++++++..++..|+||||
T Consensus 37 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 2h34_A 37 RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR-LQEPHVVPIHDFGEIDGQLYVDMRL 115 (309)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhh-cCCCCeeEEEEEEeeCCeEEEEEEe
Confidence 34455788999999999998889999999875432221 2456778877777 6999999999999999999999999
Q ss_pred cCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 763 IEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+++|+|.++++. +++.++..++.|+++||+|||. .+|+||||||+||+++.+. .+++.|||.+....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~ 190 (309)
T 2h34_A 116 INGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADD--FAYLVDFGIASATTDEKLT 190 (309)
T ss_dssp CCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS--CEEECSCCC----------
T ss_pred cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCC--CEEEecCccCccccccccc
Confidence 999999999963 8999999999999999999994 5899999999999998654 57899999875422
Q ss_pred --CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 --SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+++.|+|||++.+..++.++||||||+++|||+||+.||.... ......... ...... .......
T Consensus 191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~---~~~~~~----~~~~~~~ 261 (309)
T 2h34_A 191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ--LSVMGAHIN---QAIPRP----STVRPGI 261 (309)
T ss_dssp ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH--HHHHHHHHH---SCCCCG----GGTSTTC
T ss_pred cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch--HHHHHHHhc---cCCCCc----cccCCCC
Confidence 23468899999999999999999999999999999999999997531 111111111 110000 0111122
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHHhhccC
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARP-CASDVTKTLESCFRIS 954 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RP-t~~~v~~~L~~~~~~~ 954 (966)
+ .++.+++.+||+.||++|| +++++++.|++.+...
T Consensus 262 ~------~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 P------VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp C------THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred C------HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 2 2466778899999999999 9999999999865544
No 159
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=331.84 Aligned_cols=257 Identities=20% Similarity=0.254 Sum_probs=183.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHH-HhhcCCCceeEEeeEEec-----CCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQF-GKLIMHPNIVRLHGVCRS-----EKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~-~~~~~H~niv~l~g~~~~-----~~~~~lv 759 (966)
.....+|+|++|.||+|+. ++..||||++.... ...+..|.+.. .+.++||||+++++++.. ....++|
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred heeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 4455678999999999975 78899999985432 22333333222 223799999999986542 2367899
Q ss_pred EEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcC------CCCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105 760 YEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHC------SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY 831 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~------~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~ 831 (966)
|||+++|+|.++++ ..+|..+.+++.||++||+|||..+ .++|+||||||+|||++.+. .++++|||++.
T Consensus 91 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kL~DFG~a~ 168 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG--TCVISDFGLSM 168 (336)
T ss_dssp ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS--CEEECCCTTCE
T ss_pred EecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC--cEEEeecccee
Confidence 99999999999996 4789999999999999999999432 22999999999999999654 57899999985
Q ss_pred ecC--------------CCCcCCcccccccccCC-------CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchh---hH
Q 002105 832 CTD--------------SKSINSSAYVAPETKES-------KDITEKGDIYGFGLILIDLLTGKSPADADFGVHE---SI 887 (966)
Q Consensus 832 ~~~--------------~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~---~~ 887 (966)
... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.|+.......+ ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~ 248 (336)
T 3g2f_A 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248 (336)
T ss_dssp ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence 422 13368999999999876 4567899999999999999999877543211100 00
Q ss_pred ---------HHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 888 ---------VEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 888 ---------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.+.......... ..|.+............++.+++.+||+.||++|||++||+++|++++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 249 QTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp HHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 000011111000 11222222222223445678889999999999999999999999996543
No 160
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-34 Score=315.82 Aligned_cols=245 Identities=20% Similarity=0.296 Sum_probs=190.5
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc------cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI------TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~------~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
....+|+|++|.||+++...++..||+|.+...... ..+.+.+|+..+.+ ++||||+++++++..++..++||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~ 87 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE-IRHPNIITLHDIFENKTDVVLIL 87 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHh-CCCCCeeehhheecCCCeEEEEE
Confidence 345578899999999999888999999998654322 23457788887777 69999999999999999999999
Q ss_pred EccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC--CceEEEeccccceecC-
Q 002105 761 EYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD--EPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 761 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~--~~~~~~~~~~~~~~~~- 834 (966)
||+++++|.+++. .+++..+..++.|++.||+||| ..+|+||||||+||+++.+. ...++++|||.+....
T Consensus 88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 88 ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred eecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 9999999999996 3899999999999999999999 45999999999999998654 3368999999886532
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+++.|+|||++.+..++.++||||||+++|||+||+.||..... .+.. .... . ... . .++....
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~-~~~~---~-~~~-~-~~~~~~~ 236 (283)
T 3bhy_A 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETL-TNIS---A-VNY-D-FDEEYFS 236 (283)
T ss_dssp -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHH-HHHH---T-TCC-C-CCHHHHT
T ss_pred CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-HHHH-HHhH---h-ccc-C-Ccchhcc
Confidence 234689999999999999999999999999999999999999875421 1111 1111 0 000 0 1111111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK--TLES 949 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~--~L~~ 949 (966)
..+ .++.+++.+|++.||++|||+.|+++ .++.
T Consensus 237 ~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 237 NTS------ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp TCC------HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred cCC------HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 111 24667888999999999999999986 4444
No 161
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.1e-37 Score=336.75 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=172.5
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhh-cCCCceeEEeeEEecCC----eeEEEEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKL-IMHPNIVRLHGVCRSEK----AAYLVYE 761 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~-~~H~niv~l~g~~~~~~----~~~lv~E 761 (966)
....+|+|++|.||+|+. ++..||||++... ....+..|.+.+... ++|||||++++++..++ ..++|||
T Consensus 7 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp CCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred ehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 344568899999999975 5889999987532 233456666555443 68999999999998776 7899999
Q ss_pred ccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 762 YIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHC-----SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 762 y~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~-----~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|+++|+|.++++. +++..+.+++.|++.||+|||... ..+|+||||||+||+++.+. .++++|||++....
T Consensus 82 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~--~~kl~DFg~a~~~~ 159 (303)
T 3gxj_A 82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTC--CC-BCCCCC-CCEE
T ss_pred ccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCC--CEEEeecCcceecc
Confidence 9999999999974 788899999999999999999322 56899999999999999765 46889999875321
Q ss_pred ----------CCCcCCcccccccccCCC------CCCCcchHHHHHHHHHHHHcC----------CCCCCCCCCchhhHH
Q 002105 835 ----------SKSINSSAYVAPETKESK------DITEKGDIYGFGLILIDLLTG----------KSPADADFGVHESIV 888 (966)
Q Consensus 835 ----------~~~~~~~~y~aPE~~~~~------~~~~~~Dv~S~Gv~l~el~tg----------~~p~~~~~~~~~~~~ 888 (966)
....||+.|+|||++.+. .++.++|||||||++|||+|| +.||...........
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3gxj_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC
T ss_pred CCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHH
Confidence 122689999999998776 445689999999999999999 556543211100000
Q ss_pred HHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 889 EWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 889 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
+........ . ..|.+..... ..+....+.+++.+||+.||++|||++||+++|+++.+
T Consensus 240 ~~~~~~~~~-~----~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 240 EMRKVVCEQ-K----LRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp -CHHHHTTS-C----CCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred HHHHHHHHh-h----cCCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 111111110 0 1121111111 12455678889999999999999999999999998433
No 162
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-34 Score=321.57 Aligned_cols=236 Identities=22% Similarity=0.293 Sum_probs=178.9
Q ss_pred ccccccCCCCCccEEEEEEEe---cCCcEEEEEEEeccC----cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 685 EENLTSRGKKGVSSSYKVRSL---ANDMQFVVKKIIDVN----TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~---~~~~~vavk~~~~~~----~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
+.....+|+|++|.||+++.. .++..||+|++.... ......+.+|+..+.+ ++|||||++++++..++..|
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-VKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHH-CCCTTBCCEEEEEECSSCEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHh-CCCCCccceeEEEEcCCEEE
Confidence 345566799999999999975 578999999986532 1223456677777777 79999999999999999999
Q ss_pred EEEEccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-
Q 002105 758 LVYEYIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT- 833 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~- 833 (966)
+||||+++|+|.++++. +++.....++.||+.||+|||. .+|+||||||+||+++.++ .++++|||++...
T Consensus 98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 98 LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESI 172 (327)
T ss_dssp EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTS--CEEECCCSCC----
T ss_pred EEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCC--cEEEEeCCcccccc
Confidence 99999999999999863 8899999999999999999994 5899999999999998654 5789999987532
Q ss_pred -----CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccc
Q 002105 834 -----DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI 908 (966)
Q Consensus 834 -----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 908 (966)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.. +.+. .. .. .+
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~-~~i~---~~-~~------~~ 240 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-KKTI-DKIL---KC-KL------NL 240 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHH---HT-CC------CC
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-HHHH-HHHH---hC-CC------CC
Confidence 2234689999999999999999999999999999999999999975421 1111 1111 11 00 01
Q ss_pred cCCCcchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 002105 909 RGHVSSIQNEIVEIMNLALHCTAGDPTARP-----CASDVT 944 (966)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~ 944 (966)
....+ .++.+++.+|++.||++|| ++.|++
T Consensus 241 p~~~~------~~~~~li~~~L~~dp~~R~~~~~~~~~e~l 275 (327)
T 3a62_A 241 PPYLT------QEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275 (327)
T ss_dssp CTTSC------HHHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred CCCCC------HHHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence 11121 2456778899999999999 556664
No 163
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.2e-35 Score=327.85 Aligned_cols=190 Identities=24% Similarity=0.321 Sum_probs=161.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcC-----CCceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIM-----HPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~-----H~niv~l~g~~~~~~~~~lv 759 (966)
+.....+|+|++|.||+|+...++..||||++... ....+.+..|+..+.+ ++ |||||++++++...+..++|
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~-l~~~~~~h~~iv~~~~~~~~~~~~~lv 114 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKK-IQNDDINNNNIVKYHGKFMYYDHMCLI 114 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHH-TCCCSTTGGGBCCEEEEEEETTEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHH-hcccCCCCCCeecccceeeECCeeEEE
Confidence 44556679999999999999889999999988532 2223445667766666 44 99999999999999999999
Q ss_pred EEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-----------------
Q 002105 760 YEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK----------------- 817 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~----------------- 817 (966)
|||+ +|+|.+++.. +++.....++.||+.||+||| +.+|+||||||+|||++..
T Consensus 115 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~ 190 (360)
T 3llt_A 115 FEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK 190 (360)
T ss_dssp ECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred EcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhccccccc
Confidence 9999 8999999963 889999999999999999999 5589999999999999852
Q ss_pred ------CCceEEEeccccceecC---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 818 ------DEPHLRLSVPGLAYCTD---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 818 ------~~~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
....++++|||.+.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 191 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 191 IQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 24568999999986532 3457899999999999999999999999999999999999999754
No 164
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-35 Score=332.12 Aligned_cols=241 Identities=21% Similarity=0.265 Sum_probs=184.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
......+|+|+||.||+++...+|+.||+|++.... ....+.+.+|...+.+ ++|||||++++++.+++..|+|||
T Consensus 63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~-~~hp~Iv~l~~~~~~~~~~~lVmE 141 (412)
T 2vd5_A 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQLHFAFQDENYLYLVME 141 (412)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHH-SCTTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEeeCCEEEEEEc
Confidence 455667899999999999998899999999986432 2233456777777766 799999999999999999999999
Q ss_pred ccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 762 YIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 762 y~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
||+||+|.++++ .+++..+..++.||+.||+||| +.+||||||||+|||+|.++ +++++|||++....
T Consensus 142 ~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g--~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 142 YYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCG--HIRLADFGSCLKLRADG 216 (412)
T ss_dssp CCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCC--CEEEeechhheeccCCC
Confidence 999999999995 4899999999999999999999 45899999999999999654 68999999986432
Q ss_pred ----CCCcCCcccccccccC-------CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc
Q 002105 835 ----SKSINSSAYVAPETKE-------SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW 903 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~-------~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (966)
...+||+.|||||++. ...|+.++|||||||++|||+||+.||.+... .+........ ....
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~~-~~~~----- 289 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-AETYGKIVHY-KEHL----- 289 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTH-HHHC-----
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhc-ccCc-----
Confidence 2347999999999886 46789999999999999999999999976421 1111111100 0000
Q ss_pred ccccccCCCcchHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 002105 904 VDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTAR---PCASDVTK 945 (966)
Q Consensus 904 ~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R---Pt~~~v~~ 945 (966)
.-|......+ .++.+++.+|++ +|++| |+++||.+
T Consensus 290 ~~p~~~~~~s------~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 290 SLPLVDEGVP------EEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CCC----CCC------HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCCccccCCC------HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0111111222 245667789998 99998 58888753
No 165
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-34 Score=314.44 Aligned_cols=237 Identities=21% Similarity=0.332 Sum_probs=185.7
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...++..||+|++.... ......+.+|+..+.+ ++||||+++++++.+++..++||||
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH-LRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHc-CCCCCCcchhheEecCCEEEEEEec
Confidence 33455789999999999998889999999986432 1123446677777766 7999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----C
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----S 835 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----~ 835 (966)
+++|+|.+++. .+++..+..++.|++.||+||| ..+|+||||||+||+++.+. .+++.|||.+.... .
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~--~~~l~Dfg~~~~~~~~~~~ 165 (279)
T 3fdn_A 91 APLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRT 165 (279)
T ss_dssp CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTS--CEEECSCCEESCC------
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCC--CEEEEeccccccCCccccc
Confidence 99999999986 4899999999999999999999 56999999999999998654 57899999875422 2
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
...|++.|+|||.+.+..++.++||||||+++|||++|+.||.... .......... .........+
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~----------~~~~~~~~~~-- 231 (279)
T 3fdn_A 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--YQETYKRISR----------VEFTFPDFVT-- 231 (279)
T ss_dssp --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHH----------TCCCCCTTSC--
T ss_pred ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--HHHHHHHHHh----------CCCCCCCcCC--
Confidence 3468999999999999999999999999999999999999997532 1111111110 0111111121
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
.++.+++.+|++.||++|||++||++.
T Consensus 232 ----~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 232 ----EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 245677889999999999999999853
No 166
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.5e-35 Score=313.88 Aligned_cols=239 Identities=20% Similarity=0.338 Sum_probs=190.0
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||+++. .++..||+|++.... ...+++.+|+..+.+ ++||||+++++++.+++..++||||+++|
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGA-MSEEDFIEEAEVMMK-LSHPKLVQLYGVCLEQAPICLVTEFMEHG 88 (267)
T ss_dssp EEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTT-BCHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred eeeEecCCCceeEEEEEe-cCCCeEEEEEccccC-CCHHHHHHHHHHHHh-CCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence 345578899999999998 578889999886543 234567888888877 69999999999999999999999999999
Q ss_pred CHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-------CC
Q 002105 767 ELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-------DS 835 (966)
Q Consensus 767 ~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-------~~ 835 (966)
+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||+++.+ ..++++|||.+... ..
T Consensus 89 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 89 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGG--GCEEECCTTGGGGBCCHHHHSTT
T ss_pred cHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCC--CCEEEcccccccccccccccccc
Confidence 99999963 789999999999999999999 4589999999999999865 45789999987542 12
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
...+++.|+|||...+..++.++||||||+++|||+| |+.||.... .....+... .... +......+
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~i~---~~~~------~~~~~~~~- 231 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDIS---TGFR------LYKPRLAS- 231 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHH---TTCC------CCCCTTSC-
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--HHHHHHHHh---cCCc------CCCCccCc-
Confidence 3456778999999988889999999999999999999 899987532 111112111 1100 11111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESC 950 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~ 950 (966)
.++.+++.+|++.||++|||++|+++.|+++
T Consensus 232 -----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 232 -----THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 2466788899999999999999999999984
No 167
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-34 Score=323.12 Aligned_cols=245 Identities=21% Similarity=0.322 Sum_probs=186.7
Q ss_pred cccCCCCCccEEEEEEEecCC----cEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 688 LTSRGKKGVSSSYKVRSLAND----MQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~----~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
...+|+|++|.||+|+...++ ..||||++..... .....+.+|+..+.+ ++|||||++++++...+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ-FSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEecCCCcEEEEeC
Confidence 345789999999999876543 3599998864322 223457788888777 6999999999999999999999999
Q ss_pred cCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC---
Q 002105 763 IEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS--- 835 (966)
Q Consensus 763 ~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~--- 835 (966)
+++|+|.++++ .+++.++..++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+.....
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTC--CEEECCCCC---------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCC--cEEECCCCcchhhccccc
Confidence 99999999996 38999999999999999999994 5899999999999998654 578999998754221
Q ss_pred ------CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccc
Q 002105 836 ------KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI 908 (966)
Q Consensus 836 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 908 (966)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.... ...+.+.+. ..... ..
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--~~~~~~~~~---~~~~~------~~ 271 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--NHEVMKAIN---DGFRL------PT 271 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHH---TTCCC------CC
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHH---CCCcC------CC
Confidence 1235678999999998999999999999999999999 999986431 111112111 11110 01
Q ss_pred cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 002105 909 RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISS 955 (966)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~ 955 (966)
....+ .++.+++.+||+.||++||++.||++.|+++++..+
T Consensus 272 ~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 272 PMDCP------SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp CTTCB------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred cccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 11111 256678889999999999999999999998666543
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=318.12 Aligned_cols=235 Identities=20% Similarity=0.300 Sum_probs=167.3
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
....+|+|++|.||+|+...+|..||||.+..... ...+.+.+|+..+.+ ++||||+++++++.+++..++||||+
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ-LKHPSILELYNYFEDSNYVYLVLEMC 93 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-BCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHh-CCCCCeEeEEEEEccCCeEEEEEecC
Confidence 34456889999999999988999999999864321 122456777777766 79999999999999999999999999
Q ss_pred CCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
++|+|.++++. +++..+..++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 94 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~ 168 (278)
T 3cok_A 94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEK 168 (278)
T ss_dssp TTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTC--CEEECCCTTCEECC-----
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCC--CEEEEeecceeeccCCCCc
Confidence 99999999963 7999999999999999999994 5899999999999998654 57899999876532
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... +.. ... .. .+.......+
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~----~~~----~~---~~~~~~~~~~ 236 (278)
T 3cok_A 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTL----NKV----VL---ADYEMPSFLS 236 (278)
T ss_dssp -----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C----CS---SCCCCCTTSC
T ss_pred ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-HHH----HHH----hh---cccCCccccC
Confidence 1346789999999999989999999999999999999999998754211 111 000 00 0111111122
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++||++
T Consensus 237 ------~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 237 ------IEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 25667888999999999999999875
No 169
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.2e-35 Score=350.07 Aligned_cols=240 Identities=18% Similarity=0.285 Sum_probs=187.5
Q ss_pred cCCCCCccEEEEEEEec--CCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 690 SRGKKGVSSSYKVRSLA--NDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~--~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
.+|+|+||.||+|.... ++..||||++.... ....++|.+|+..+.+ ++|||||+++|+|.. +..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~-l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ-LDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTT-CCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHh-CCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 46999999999998753 45679999886542 2234568888888877 699999999999986 5689999999999
Q ss_pred CHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--------
Q 002105 767 ELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------- 834 (966)
Q Consensus 767 ~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------- 834 (966)
+|.++++ .+++..+..++.||++||+||| +.+||||||||+|||++.+ ..++++|||++....
T Consensus 421 ~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~--~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNR--HYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp BHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEET--TEEEECCCSTTTTCC--------
T ss_pred cHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCC--CcEEEeeccCcccccCCCceeee
Confidence 9999995 3899999999999999999999 4589999999999999865 468999999985421
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||..... . .+.+.+.. +... .....+
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~-~~~~~i~~---~~~~------~~p~~~ 564 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-P-EVMAFIEQ---GKRM------ECPPEC 564 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-H-HHHHHHHT---TCCC------CCCTTC
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-H-HHHHHHHc---CCCC------CCCCcC
Confidence 11234578999999998999999999999999999998 9999975422 2 22222221 1111 011112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ .++.+++..||+.||++||+|.+|+++|+.++..
T Consensus 565 ~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 565 P------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp C------HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 2 3567788999999999999999999999986554
No 170
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.7e-35 Score=336.45 Aligned_cols=242 Identities=16% Similarity=0.222 Sum_probs=181.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--------cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--------TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--------~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
.....+|+|+||.||+|....++..||||++.... ......+.+|+..+.+ ++|||||++++++.. +..|
T Consensus 138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~-~~~~ 215 (419)
T 3i6u_A 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK-LNHPCIIKIKNFFDA-EDYY 215 (419)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHH-CCCTTBCCCCEEEES-SEEE
T ss_pred EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHh-CCCCCEeeEEEEEec-CceE
Confidence 34456799999999999998999999999986532 1123357888888888 699999999999865 5579
Q ss_pred EEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceec
Q 002105 758 LVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCT 833 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~ 833 (966)
+|||||++|+|.+++. .+++.....++.|++.||+|||. .+|+||||||+|||++.+. ...++++|||++...
T Consensus 216 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~ 292 (419)
T 3i6u_A 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292 (419)
T ss_dssp EEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecccceec
Confidence 9999999999999885 48999999999999999999994 5899999999999997543 346899999998643
Q ss_pred C-----CCCcCCcccccccccC---CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc
Q 002105 834 D-----SKSINSSAYVAPETKE---SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD 905 (966)
Q Consensus 834 ~-----~~~~~~~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 905 (966)
. ....||+.|+|||++. ...++.++|||||||++|||+||+.||.......... +.... .... ..
T Consensus 293 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~-~~i~~----~~~~--~~ 365 (419)
T 3i6u_A 293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK-DQITS----GKYN--FI 365 (419)
T ss_dssp C-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHH-HHHHT----TCCC--CC
T ss_pred CCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHH-HHHhc----CCCC--CC
Confidence 2 2346899999999975 3678889999999999999999999997543222211 21111 1100 01
Q ss_pred ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
|...... ..++.+++.+|++.||++|||++|+++
T Consensus 366 ~~~~~~~------~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 366 PEVWAEV------SEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhccc------CHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111111 135667888999999999999999875
No 171
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.8e-35 Score=341.97 Aligned_cols=237 Identities=21% Similarity=0.263 Sum_probs=188.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|+||.||+|+...+|..||+|++.... ......+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~-l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-VNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHH-cCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 34456799999999999998899999999986532 2223346778777777 7999999999999999999999999
Q ss_pred cCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 763 IEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
|+||+|.+++.. +++..+..++.||+.||+|||. .+||||||||+|||++.++ +++++|||++....
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g--~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTS--CEEECCCTTCEECCTTC
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCC--CeEEEecccceecccCc
Confidence 999999999963 8899999999999999999994 5899999999999999654 68999999986532
Q ss_pred --CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc--hhhHHHHHHHhhccCcccccccccccC
Q 002105 835 --SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV--HESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 835 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
...+||+.|+|||++.+..|+.++|||||||++|||+||+.||...... ...+.+.+.. . .+....
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~---~-------~~~~p~ 410 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---V-------PEEYSE 410 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH---C-------CCCCCT
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc---c-------cccCCc
Confidence 2347899999999999999999999999999999999999999764321 1222121111 0 011111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARP-----CASDVT 944 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~ 944 (966)
..+ .++.+++.+|++.||++|| +++||+
T Consensus 411 ~~s------~~~~dLI~~lL~~dP~~R~g~~~~sa~eil 443 (576)
T 2acx_A 411 RFS------PQARSLCSQLLCKDPAERLGCRGGSAREVK 443 (576)
T ss_dssp TSC------HHHHHHHHHHTCSSGGGSTTCSSSHHHHHH
T ss_pred cCC------HHHHHHHHHhccCCHHHcCCCCCCCHHHHH
Confidence 222 2466778899999999999 667775
No 172
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=8.7e-35 Score=317.25 Aligned_cols=246 Identities=20% Similarity=0.307 Sum_probs=182.5
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
....+|+|++|.||+|+. .+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++..++..++||||++
T Consensus 6 ~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGG-CCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred hhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHh-cCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 445678999999999998 7899999999864322 223456778877777 799999999999999999999999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------ 834 (966)
+ +|.+++. .+++.....++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 84 Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTS--CEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCC--CEEEeECccccccCcccccc
Confidence 5 9999886 3789999999999999999999 45999999999999998654 57899999875421
Q ss_pred CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc--------cc
Q 002105 835 SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW--------VD 905 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~d 905 (966)
....+|+.|+|||++.+ ..++.++||||+||++|||+||+.||.+... .+......+. ........| .+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-ADQLMRIFRI-LGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHH-HCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH-HCCCChhhchhhhcccccc
Confidence 23467999999999876 4589999999999999999999999975421 2222121111 110000000 11
Q ss_pred ccccC--------CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 906 PFIRG--------HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 906 ~~~~~--------~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+.... ..... ..++.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGL---DESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCCCCCCCGGGTCCSC---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccCccHHHHhhhc---CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11100 00011 134567888999999999999999875
No 173
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2e-35 Score=326.02 Aligned_cols=244 Identities=21% Similarity=0.348 Sum_probs=180.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCCCceeEEeeEEecCC----eeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK----AAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~----~~~l 758 (966)
.....+|+|++|.||+|++..++..||||++....... ...+.+|+..+.+ ++|||||++++++...+ ..|+
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA-LNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCC-CCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHc-CCCCCcceEEEeeeccCCCCcccEE
Confidence 34456789999999999998999999999986542222 2346677766666 69999999999987654 3499
Q ss_pred EEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 759 VYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
||||+++|+|.++++ .+++.+...++.|++.||+||| ..+|+||||||+||+++.+. .++++|||.+....
T Consensus 94 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATN--AVKVMDFGIARAIAD 168 (311)
T ss_dssp EEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTS--CEEECCCSCC-----
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCC--CEEEeeccCcccccc
Confidence 999999999999996 3899999999999999999999 45899999999999998654 47899999875321
Q ss_pred --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....... .... ..+
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~----~~~~---~~~ 240 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-VSVAYQHVR----EDPI---PPS 240 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHH----CCCC---CHH
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhc----CCCC---Ccc
Confidence 123589999999999999999999999999999999999999975421 111111111 1100 000
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHHH
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASD-VTKTLES 949 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~-v~~~L~~ 949 (966)
......+ .++.+++.+|++.||++||++.+ +...+.+
T Consensus 241 ~~~~~~~------~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 241 ARHEGLS------ADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp HHSTTCC------HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cccCCCC------HHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 0011111 24667888999999999997655 4455655
No 174
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.8e-35 Score=340.40 Aligned_cols=235 Identities=21% Similarity=0.286 Sum_probs=186.9
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
....+|+|++|.||+|++..+|..||||++..... .....+.+|+..+.+ ++|||||++++++..++..|+||||+
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~lv~E~~ 98 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL-FRHPHIIKLYQVISTPSDIFMVMEYV 98 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 34457899999999999988999999999864321 122356777777766 79999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----C
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-----S 835 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-----~ 835 (966)
++|+|.+++. .+++.....++.||+.||+||| +.+|+||||||+||+++.+. .++++|||++.... .
T Consensus 99 ~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~--~vkL~DFG~a~~~~~~~~~~ 173 (476)
T 2y94_A 99 SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLR 173 (476)
T ss_dssp SSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTC--CEEECCCSSCEECCTTCCBC
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCC--CeEEEeccchhhcccccccc
Confidence 9999999996 4899999999999999999999 56999999999999999654 57899999986532 2
Q ss_pred CCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 836 KSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
..+||+.|+|||++.+..+ +.++||||+||++|||+||+.||+.... .... +.+ ... .. . .....+
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~-~~i---~~~-~~---~---~p~~~s- 240 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-PTLF-KKI---CDG-IF---Y---TPQYLN- 240 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-HHHH-HHH---HTT-CC---C---CCTTCC-
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-HHHH-HHH---hcC-Cc---C---CCccCC-
Confidence 3478999999999988776 6799999999999999999999975421 1111 111 111 10 0 011111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++||++
T Consensus 241 -----~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 241 -----PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 24667888999999999999999985
No 175
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.5e-34 Score=316.16 Aligned_cols=241 Identities=21% Similarity=0.303 Sum_probs=186.6
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||+++...+|+.||+|++........+.+.+|+..+.+ ++||||+++++++.+++..++||||+++|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (304)
T 2jam_A 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK-IKHENIVTLEDIYESTTHYYLVMQLVSGG 91 (304)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHh-CCCCCeeehhhhcccCCEEEEEEEcCCCc
Confidence 34557889999999999988999999999876544445567888888877 69999999999999999999999999999
Q ss_pred CHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecCCC----Cc
Q 002105 767 ELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTDSK----SI 838 (966)
Q Consensus 767 ~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~~~----~~ 838 (966)
+|.+++. .+++.....++.|++.||+|||. .+|+||||||+||++.. +....++++|||.+...... ..
T Consensus 92 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (304)
T 2jam_A 92 ELFDRILERGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC 168 (304)
T ss_dssp BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHH
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccccc
Confidence 9999885 38999999999999999999994 58999999999999932 23456899999987643322 24
Q ss_pred CCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHH
Q 002105 839 NSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNE 918 (966)
Q Consensus 839 ~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 918 (966)
||+.|+|||.+.+..++.++|||||||++|||+||+.||.... .....+.... . .. .+..+ .....+
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~---~-~~-~~~~~-~~~~~~----- 235 (304)
T 2jam_A 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--ESKLFEKIKE---G-YY-EFESP-FWDDIS----- 235 (304)
T ss_dssp SCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHH---C-CC-CCCTT-TTTTSC-----
T ss_pred CCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHc---C-CC-CCCcc-ccccCC-----
Confidence 8999999999999999999999999999999999999987532 1111111111 1 00 00111 111121
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 919 IVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 919 ~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 236 -~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 236 -ESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 25667888999999999999999975
No 176
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.5e-35 Score=319.11 Aligned_cols=243 Identities=20% Similarity=0.303 Sum_probs=180.5
Q ss_pred cccccCCCCCccEEEEEEEecC---CcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLAN---DMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~---~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
.....+|+|++|.||+|+...+ +..||+|+...... ...+.+.+|+..+.+ ++|||||++++++. ++..|+|||
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~-~~~~~lv~e 95 (281)
T 1mp8_A 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIVKLIGVIT-ENPVWIIME 95 (281)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCccceEEEEEc-cCccEEEEe
Confidence 3344578999999999998543 45688888754322 223457788887777 69999999999985 567899999
Q ss_pred ccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 762 YIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 762 y~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
|+++|+|.++++ .+++..+..++.|+++||+|||. .+|+||||||+||+++.+ ..+++.|||.+....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 96 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEET--TEEEECC-----------
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCC--CCEEECccccccccCccc
Confidence 999999999996 38899999999999999999994 589999999999999865 468999999875422
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... .+ ....+.. ... +...
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-~~-~~~~i~~---~~~------~~~~ 239 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-ND-VIGRIEN---GER------LPMP 239 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-GG-HHHHHHT---TCC------CCCC
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-HH-HHHHHHc---CCC------CCCC
Confidence 22345778999999988899999999999999999997 9999875422 11 2122211 110 0111
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
...+ .++.+++.+|++.||++|||+.|+++.|++++.
T Consensus 240 ~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 240 PNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1222 246678889999999999999999999998544
No 177
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.6e-35 Score=318.71 Aligned_cols=244 Identities=21% Similarity=0.319 Sum_probs=193.7
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+...++..||+|++... ....+.+.+|+..+.+ ++|||||++++++.+++..++||||+++
T Consensus 16 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 93 (288)
T 3kfa_A 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTY 93 (288)
T ss_dssp EEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred eEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHh-CCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence 3445678999999999999888999999988543 2334567888888877 6999999999999999999999999999
Q ss_pred CCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105 766 KELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS----- 835 (966)
Q Consensus 766 g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~----- 835 (966)
|+|.++++. +++..+..++.+++.||+|||. .+|+||||||+||+++.+. .+++.|||.+.....
T Consensus 94 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp EEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGG--CEEECCCCGGGTSCSSSSEE
T ss_pred CcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCC--CEEEccCccceeccCCcccc
Confidence 999999963 8899999999999999999995 4899999999999998654 578999998754321
Q ss_pred --CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 836 --KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 836 --~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
...+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... ...+.+...... .+......
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~~~~~---------~~~~~~~~ 237 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDY---------RMERPEGC 237 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTC---------CCCCCTTC
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhccC---------CCCCCCCC
Confidence 2245778999999998899999999999999999999 999987532 122222222110 11111112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ .++.+++..|++.||++|||++||++.|++.+..
T Consensus 238 ~------~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 238 P------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 2 2566788899999999999999999999985543
No 178
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.1e-35 Score=352.18 Aligned_cols=239 Identities=17% Similarity=0.234 Sum_probs=185.8
Q ss_pred cCCCCCccEEEEEEEe--cCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 690 SRGKKGVSSSYKVRSL--ANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~--~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.+|+|+||.||+|... ..+..||||++..... ...+++.+|+..+.+ ++|||||+++|+|.. +..++|||||++
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ-LDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHH-CCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4789999999999653 4567899998865322 223568888888877 699999999999975 458899999999
Q ss_pred CCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--------
Q 002105 766 KELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------- 834 (966)
Q Consensus 766 g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------- 834 (966)
|+|.++++ .++|..+..++.||+.||+|||. .+||||||||+|||++.+. .++++|||++....
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETT--EEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCC--CEEEEEcCCccccccCcccccc
Confidence 99999996 38999999999999999999994 5899999999999999654 67899999875321
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.. ...+.+.+. .... +.....+
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~---~~~~------~~~p~~~ 597 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLE---KGER------MGCPAGC 597 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH---TTCC------CCCCTTC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCC------CCCCCCC
Confidence 12345678999999999999999999999999999999 999997542 122212221 1111 0111112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
+ .++.+++..||+.||++||++++|+++|++++.
T Consensus 598 ~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 598 P------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp C------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 2 356778889999999999999999999998543
No 179
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-34 Score=314.06 Aligned_cols=243 Identities=19% Similarity=0.336 Sum_probs=190.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+. .++..||||++.... ...+.+.+|+..+.+ ++||||+++++++.. +..++||||+++
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 91 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ-LQHQRLVRLYAVVTQ-EPIYIITEYMEN 91 (279)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTS-SCHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred hheeeecCCCCeEEEEEEE-cCCcEEEEEEecCCc-ccHHHHHHHHHHHHh-CCCcCcceEEEEEcC-CCcEEEEecCCC
Confidence 3445678999999999997 677789999885432 334567888888877 699999999999874 568999999999
Q ss_pred CCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105 766 KELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 766 g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------ 834 (966)
|+|.++++ .+++.++..++.|++.||+||| +.+|+||||||+||+++++. .++++|||.+....
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTS--CEEECCCTTCEECSSSCEEC
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCC--CEEECCCcccccccCccccc
Confidence 99999985 4899999999999999999999 45899999999999998654 57899999876432
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+++.|+|||.+.+..++.++|||||||++|||+| |+.||.... .....+... ... .+......
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~---~~~------~~~~~~~~ 235 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVIQNLE---RGY------RMVRPDNC 235 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH---TTC------CCCCCTTC
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--HHHHHHHHh---ccc------CCCCcccc
Confidence 22345778999999988889999999999999999999 899986532 111112111 110 01111112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
+ .++.+++.+|++.||++|||++++++.|++++...
T Consensus 236 ~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 236 P------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp C------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred c------HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 2 25667888999999999999999999999965543
No 180
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=316.47 Aligned_cols=238 Identities=23% Similarity=0.330 Sum_probs=184.5
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKE 767 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~ 767 (966)
...+|+|++|.||+|+...++..||||++........+.+.+|+..+.+ ++|||||++++++..++..++||||+++|+
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH-LKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHh-CCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 3357889999999999988999999999876555445667788877777 699999999999999999999999999999
Q ss_pred HHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------C
Q 002105 768 LSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------S 835 (966)
Q Consensus 768 L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------~ 835 (966)
|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.. ...++++|||.+.... .
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~-~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTY-SGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETT-TCCEEECCTTTCEESCC-----C
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECC-CCCEEEeecccccccCCCCCccc
Confidence 9999963 4688888999999999999994 589999999999999862 3467899999886432 2
Q ss_pred CCcCCcccccccccCCCC--CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 836 KSINSSAYVAPETKESKD--ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
...|++.|+|||++.+.. ++.++|||||||++|||+||+.||.......... +...... ..+.+....+
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~ 252 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FKVGMFK-------VHPEIPESMS 252 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HHHHHHC-------CCCCCCTTSC
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hhhcccc-------ccccccccCC
Confidence 346899999999986643 7899999999999999999999986421111111 1110010 1112222222
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+||+.||++|||+.|+++
T Consensus 253 ------~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 253 ------AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ------HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 25667888999999999999999875
No 181
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-35 Score=328.73 Aligned_cols=242 Identities=22% Similarity=0.367 Sum_probs=179.8
Q ss_pred ccCCCCCccEEEEEEEecCC---cEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEec-CCeeEEEEEcc
Q 002105 689 TSRGKKGVSSSYKVRSLAND---MQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS-EKAAYLVYEYI 763 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~---~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~-~~~~~lv~Ey~ 763 (966)
..+|+|+||.||+|+...++ ..||||.+..... ...++|.+|+..+.+ ++|||||+++++|.. ++..++||||+
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-FSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTT-CCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 45799999999999975443 3578887754322 233557778877777 699999999999765 56789999999
Q ss_pred CCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
++|+|.++++. +++..+..++.||++||+||| +.+|+||||||+||+++.+. .++++|||++....
T Consensus 174 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 174 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTC--CEEECCC------------
T ss_pred CCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCC--CEEEeeccccccccccccc
Confidence 99999999963 789999999999999999999 45899999999999998654 57899999885321
Q ss_pred -----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccc
Q 002105 835 -----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI 908 (966)
Q Consensus 835 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 908 (966)
....+|+.|+|||++.+..++.++|||||||++|||+| |.+||.... ..+.. .... ..... ..|
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-~~~~~-~~~~---~~~~~---~~p-- 318 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDIT-VYLL---QGRRL---LQP-- 318 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-SSCHH-HHHH---TTCCC---CCC--
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-HHHHH-HHHH---cCCCC---CCC--
Confidence 22346778999999999999999999999999999999 666765432 12211 2111 11110 111
Q ss_pred cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 909 RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
..++ .++.+++.+||+.||++|||++||++.|++++..
T Consensus 319 -~~~~------~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 319 -EYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp -TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -CCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1122 2466788899999999999999999999996554
No 182
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.4e-35 Score=330.65 Aligned_cols=238 Identities=19% Similarity=0.286 Sum_probs=182.3
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcC-CCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIM-HPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~-H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|+||.||++.. ..+..||||++.... ....+.+.+|+..+.++-. |||||++++++..++..|+|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEEC-TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEccCCCeEEEEEEc-CCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 45556789999999999997 568899999986432 2233567888888888422 6999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
+.+|+|.++++ .+++.++..++.||+.||+||| +.+|+||||||+|||+++ ..++++|||++...
T Consensus 137 -~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~---~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp -CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEESS---SCEEECCCSSSCCC-----
T ss_pred -cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEEC---CeEEEEecCccccccCCCc
Confidence 57899999996 3789999999999999999999 568999999999999974 45899999998642
Q ss_pred ---CCCCcCCcccccccccCC-----------CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc
Q 002105 834 ---DSKSINSSAYVAPETKES-----------KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH 899 (966)
Q Consensus 834 ---~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 899 (966)
.....||+.|||||++.+ ..++.++|||||||++|||+||+.||.........+ ........
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~----~~~~~~~~ 285 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAIIDPNH 285 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH----HHHHCTTS
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH----HHHhCccc
Confidence 123468999999998764 468999999999999999999999997542211111 11111110
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 900 LDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 900 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
. .......+ .++.+++.+||+.||++|||+.||++
T Consensus 286 ~-----~~~~~~~~------~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 286 E-----IEFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp C-----CCCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c-----CCCCccch------HHHHHHHHHHcccChhhCCCHHHHhh
Confidence 0 00111111 24667888999999999999999975
No 183
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.1e-35 Score=325.90 Aligned_cols=240 Identities=17% Similarity=0.240 Sum_probs=187.2
Q ss_pred ccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 689 TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
..+|+|++|.||+|+...++..||+|++..... ....++.+|+..+.++.+|||||++++++..++..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 357899999999999988999999999865322 223567788888887556899999999999999999999999999
Q ss_pred CHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecC-----C
Q 002105 767 ELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTD-----S 835 (966)
Q Consensus 767 ~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~-----~ 835 (966)
+|.+++. .+++..+..++.|++.||+||| ..+|+||||||+||+++... ...++++|||.+.... .
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 191 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence 9999884 4899999999999999999999 45899999999999998632 3568999999986532 2
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
...||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....... . ... ..+......+
T Consensus 192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~-~--~~~----~~~~~~~~~~-- 261 (327)
T 3lm5_A 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-QETYLNISQ-V--NVD----YSEETFSSVS-- 261 (327)
T ss_dssp --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-T--CCC----CCTTTTTTSC--
T ss_pred cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHHHh-c--ccc----cCchhhcccC--
Confidence 34689999999999999999999999999999999999999975421 111111111 0 000 0000111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 262 ----~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 262 ----QLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----HHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 24667788999999999999999875
No 184
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.4e-35 Score=346.24 Aligned_cols=244 Identities=18% Similarity=0.298 Sum_probs=191.6
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|+||.||+|+. ..+..||||++.... ...++|.+|+..+.+ ++|||||+++++|.+ +..|+|||||++|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~-~~~~lv~e~~~~g 346 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTW-NGTTRVAIKTLKPGT-MSPEAFLQEAQVMKK-LRHEKLVQLYAVVSE-EPIYIVTEYMSKG 346 (535)
T ss_dssp EEEEEEECSSEEEEEEEE-TTTEEEEEEEECTTS-SCHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred hheecccCCCeEEEEEEE-CCCceEEEEEeCCCC-CCHHHHHHHHHHHHh-CCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence 344578999999999998 566789999886533 334578888888877 699999999999976 6789999999999
Q ss_pred CHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105 767 ELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------- 834 (966)
Q Consensus 767 ~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------- 834 (966)
+|.++++. +++.++.+++.||++||+||| ..+||||||||+|||++.+ ..++++|||++....
T Consensus 347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp EHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG--GCEEECCTTSTTTCCCHHHHTT
T ss_pred cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCC--CcEEEcccccceecCCCceecc
Confidence 99999962 899999999999999999999 4589999999999999865 457899999985421
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....++..|+|||++....++.++|||||||++|||+| |+.||.+.. ...+.+.+. ..... .....++
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--~~~~~~~i~---~~~~~------~~~~~~~ 490 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVE---RGYRM------PCPPECP 490 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--HHHHHHHHH---TTCCC------CCCTTCC
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC------CCCCCCC
Confidence 23346778999999988899999999999999999999 999987532 112212221 11111 0111122
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCc
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISSC 956 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~~ 956 (966)
.++.+++.+||+.||++|||+++|+++|++++.....
T Consensus 491 ------~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 491 ------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred ------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 2566788899999999999999999999996554433
No 185
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6e-35 Score=329.93 Aligned_cols=239 Identities=13% Similarity=0.122 Sum_probs=183.9
Q ss_pred cccccCCCCCccEEEEE-----EEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcC---CCceeEEeeEEecCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKV-----RSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIM---HPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~-----~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~---H~niv~l~g~~~~~~~~~ 757 (966)
.....+|+|+||.||+| ....+++.||||++... ...++..|+..+.+ ++ |+|||++++++..++..|
T Consensus 68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~-l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMER-LKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHH-SCGGGGGGBCCEEEEEECSSCEE
T ss_pred EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHH-hhhhhhhhhhhhheeeecCCCcE
Confidence 34456799999999999 45678999999998543 23456666666655 45 999999999999999999
Q ss_pred EEEEccCCCCHHHHHH--------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC---------CCCc
Q 002105 758 LVYEYIEGKELSEVLR--------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG---------KDEP 820 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~---------~~~~ 820 (966)
+|||||++|+|.++++ .++|..+..++.||++||+||| +.+||||||||+|||++. +...
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccC
Confidence 9999999999999995 3899999999999999999999 568999999999999986 1145
Q ss_pred eEEEeccccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHH
Q 002105 821 HLRLSVPGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWAR 892 (966)
Q Consensus 821 ~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 892 (966)
.++++|||++... .....||+.|||||++.+..++.++|||||||++|||+||+.||........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------- 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------- 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-------
Confidence 6899999998532 2345789999999999999999999999999999999999999853211100
Q ss_pred HhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHHhhcc
Q 002105 893 YCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTAR-PCASDVTKTLESCFRI 953 (966)
Q Consensus 893 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~R-Pt~~~v~~~L~~~~~~ 953 (966)
. ++...... . ..+. +.++...|++.+|.+| |+++++.+.|++.+..
T Consensus 294 ------~----~~~~~~~~-~-~~~~---~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 ------K----PEGLFRRL-P-HLDM---WNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ------E----ECSCCTTC-S-SHHH---HHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------e----echhcccc-C-cHHH---HHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0 11111111 1 1233 3345668899999998 6789999999886544
No 186
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-34 Score=315.37 Aligned_cols=253 Identities=21% Similarity=0.243 Sum_probs=184.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc-----cccchHHHHHHHHhh--cCCCceeEEeeEEecCC---
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI-----TTSSFWPDVSQFGKL--IMHPNIVRLHGVCRSEK--- 754 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~-----~~~~~~~e~~~~~~~--~~H~niv~l~g~~~~~~--- 754 (966)
+.....+|+|++|.||+|++..++..||||++...... ....+.+|+..+.++ ++|||||+++++|....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 44556679999999999999889999999998643211 123456676665542 35999999999998755
Q ss_pred --eeEEEEEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecc
Q 002105 755 --AAYLVYEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVP 827 (966)
Q Consensus 755 --~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~ 827 (966)
..++||||++ |+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++||
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~--~~kl~Df 164 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGG--TVKLADF 164 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTS--CEEECSC
T ss_pred ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCC--CEEEeeC
Confidence 5899999998 699999963 8999999999999999999994 5899999999999998654 5789999
Q ss_pred ccceecC-----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccc
Q 002105 828 GLAYCTD-----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDT 902 (966)
Q Consensus 828 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (966)
|.+.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+... .+....... .........
T Consensus 165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~-~~~~~~~~~ 242 (308)
T 3g33_A 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFD-LIGLPPEDD 242 (308)
T ss_dssp SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-HHHHHHHHH-HHCCCCTTT
T ss_pred ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH-HhCCCChhh
Confidence 9885432 224679999999999999999999999999999999999999976422 222211111 111000001
Q ss_pred ccc------ccccCCCcchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 903 WVD------PFIRGHVSSIQ-----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 903 ~~d------~~~~~~~~~~~-----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
|.. ........... +...++.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 100 00000000000 01135667888999999999999999875
No 187
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.1e-34 Score=338.71 Aligned_cols=241 Identities=21% Similarity=0.330 Sum_probs=185.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+...++..||+|++.... ......+.+|+..+.+ ++|||||+++++|.+++..|+|||||
T Consensus 40 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~ 118 (494)
T 3lij_A 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL-LDHPNIMKLYDFFEDKRNYYLVMECY 118 (494)
T ss_dssp EEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHh-CCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 44566799999999999998899999999986542 2234557788877777 79999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~----- 834 (966)
++|+|.+++. .+++..+..++.||+.||+||| +.+|+||||||+||+++... ...++++|||++....
T Consensus 119 ~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~ 195 (494)
T 3lij_A 119 KGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM 195 (494)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc
Confidence 9999998885 4899999999999999999999 45899999999999998643 3568999999886532
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
....||+.|+|||++. ..|+.++||||+||++|||++|+.||.+... .+.. ..+.. . ... +..|. ....+
T Consensus 196 ~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~-~~i~~---~-~~~-~~~~~-~~~~s- 265 (494)
T 3lij_A 196 KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-QEIL-RKVEK---G-KYT-FDSPE-WKNVS- 265 (494)
T ss_dssp CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH-HHHHH---T-CCC-CCSGG-GTTSC-
T ss_pred cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHHh---C-CCC-CCchh-cccCC-
Confidence 3456899999999886 5699999999999999999999999975421 1111 21111 1 000 01111 11121
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 266 -----~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 266 -----EGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----HHHHHHHHHHCCCChhhCccHHHHhc
Confidence 24567788999999999999999874
No 188
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6e-35 Score=339.32 Aligned_cols=253 Identities=18% Similarity=0.222 Sum_probs=183.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEecc--CcccccchHHHHHHHHhhcCCCceeEEeeEEecC------Cee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV--NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE------KAA 756 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~------~~~ 756 (966)
+.....+|+|++|.||+|++..++..||||++... .....+.+.+|+..+.+ ++|||||++++++... +..
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHh-CCCCCCCcEEEEEccCCccccCCeE
Confidence 44566789999999999999889999999998653 22234456778877777 6999999999999654 457
Q ss_pred EEEEEccCCCCHHHHHH-cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 757 YLVYEYIEGKELSEVLR-NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|+|||||+++ |.+.++ .+++..+..++.||+.||+|||. .+|+||||||+|||++.+. .++++|||++....
T Consensus 143 ~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 143 YLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGT 216 (464)
T ss_dssp EEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTS--CEEECCCCCC-----
T ss_pred EEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCC--CEEEEEEEeeeecCC
Confidence 9999999965 555554 59999999999999999999994 5899999999999999754 58999999986532
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHh----------------
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYC---------------- 894 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------------- 894 (966)
...+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+... .+.+.......
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 335789999999999999999999999999999999999999976421 11111111100
Q ss_pred --hccC-ccc-----ccccccc-cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 895 --YSDC-HLD-----TWVDPFI-RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 895 --~~~~-~~~-----~~~d~~~-~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.... ... ......+ ............++.+++.+|++.||++|||++|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000 0000000 0000000112346788999999999999999999875
No 189
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=327.23 Aligned_cols=238 Identities=18% Similarity=0.285 Sum_probs=181.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCC--CceeEEeeEEecCCeeEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMH--PNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H--~niv~l~g~~~~~~~~~lv~ 760 (966)
+.....+|+|++|.||++.. .++..||||++..... ...+.+.+|+..+.+ ++| ||||++++++..++..|+||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK-LQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp EEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHH-HTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHh-hhhcCCceEEEeeeEeeCCEEEEEE
Confidence 34456679999999999987 7788999999864322 223557788888887 565 99999999999999999999
Q ss_pred EccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----
Q 002105 761 EYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---- 833 (966)
Q Consensus 761 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---- 833 (966)
| +.+|+|.++++ .+++.++..++.||+.||+|||. .+|+||||||+|||+++ ..++++|||++...
T Consensus 89 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~~---~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp C-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET---TEEEECCCSSSCCC----
T ss_pred e-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEEC---CcEEEeecccccccCccc
Confidence 9 56789999996 48999999999999999999994 58999999999999974 45899999998542
Q ss_pred ----CCCCcCCcccccccccCC-----------CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccC
Q 002105 834 ----DSKSINSSAYVAPETKES-----------KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDC 898 (966)
Q Consensus 834 ----~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 898 (966)
.....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.......... .......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~~~~~~~ 237 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAIIDPN 237 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----HHHHCTT
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH----HHHhcCC
Confidence 123468999999998754 678999999999999999999999997543221111 1111111
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 899 HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 899 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
.. .......+ .++.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~-----~~~~~~~~------~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 238 HE-----IEFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SC-----CCCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc-----cCCcccCC------HHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 00 00111111 246678889999999999999999753
No 190
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-34 Score=316.31 Aligned_cols=243 Identities=16% Similarity=0.260 Sum_probs=186.9
Q ss_pred ccCCCCCccEEEEEEEecCCc---EEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCee-EEEEEcc
Q 002105 689 TSRGKKGVSSSYKVRSLANDM---QFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAA-YLVYEYI 763 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~~---~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~-~lv~Ey~ 763 (966)
..+|+|++|.||+|+...++. .||+|++..... ...+.+.+|+..+.+ ++|||||++++++.+++.. ++||||+
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHT-CCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 346889999999999765554 789998864332 223457788888777 6999999999999876654 9999999
Q ss_pred CCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105 764 EGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------ 833 (966)
Q Consensus 764 ~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------ 833 (966)
++|+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+...
T Consensus 106 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 106 CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESF--TVKVADFGLARDILDREYY 180 (298)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTC--CEEECCTTSSCTTTTGGGG
T ss_pred cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC--cEEeCcCCCcccccCCccc
Confidence 99999999963 7899999999999999999994 5899999999999998654 5789999987531
Q ss_pred ----CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105 834 ----DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 834 ----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
.....+++.|+|||...+..++.++|||||||++|||+||..|+.......+ ..+..... .. +...
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~~---~~------~~~~ 250 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLAQG---RR------LPQP 250 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHHTT---CC------CCCC
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhhcC---CC------CCCC
Confidence 1223567899999999999999999999999999999996666543322222 21222211 00 0011
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
...+ .++.+++.+|++.||.+|||++|++++|++++..
T Consensus 251 ~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 251 EYCP------DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp TTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccch------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111 2566788899999999999999999999996554
No 191
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.4e-35 Score=324.01 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=190.1
Q ss_pred cccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCcc-cccchHHHHHHHHhhcCCCceeEEeeEEecCC-eeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNTI-TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK-AAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~~-~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~-~~~l 758 (966)
.....+|+|++|.||+|+.. .++..||||++...... ..+.+.+|+..+.++-+|||||+++++|..++ ..++
T Consensus 30 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~l 109 (316)
T 2xir_A 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109 (316)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred eeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEE
Confidence 44556789999999999853 45678999988654322 23457788888888447999999999998754 5899
Q ss_pred EEEccCCCCHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC
Q 002105 759 VYEYIEGKELSEVLRN-------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE 819 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~ 819 (966)
||||+++|+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~-- 184 (316)
T 2xir_A 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEK-- 184 (316)
T ss_dssp EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG--
T ss_pred EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCC--
Confidence 9999999999999963 688999999999999999999 4589999999999999854
Q ss_pred ceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002105 820 PHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEW 890 (966)
Q Consensus 820 ~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~ 890 (966)
..++++|||.+.... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||........ +...
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~~ 263 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRR 263 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-HHHH
Confidence 457899999886432 12346788999999988899999999999999999999 9999875432221 1121
Q ss_pred HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
... ... +......+ .++.+++.+||+.||++|||+.||++.|++++.
T Consensus 264 ~~~---~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 264 LKE---GTR------MRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHH---TCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcc---Ccc------CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111 110 01111111 246678889999999999999999999998554
No 192
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=324.10 Aligned_cols=243 Identities=19% Similarity=0.278 Sum_probs=175.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEe--------cCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCR--------SEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~--------~~~~~~ 757 (966)
.....+|+|++|.||+++...++..||||++........+.+.+|+..+.++..|||||++++++. .....+
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEE
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEE
Confidence 445567999999999999988999999999866655555678888888888535999999999994 344589
Q ss_pred EEEEccCCCCHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105 758 LVYEYIEGKELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY 831 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~ 831 (966)
+||||++ |+|.++++. +++..+..++.||+.||+|||.. .++|+||||||+||+++.+. .++++|||.+.
T Consensus 111 lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~ 186 (337)
T 3ll6_A 111 LLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQG--TIKLCDFGSAT 186 (337)
T ss_dssp EEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTS--CEEBCCCTTCB
T ss_pred EEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCC--CEEEecCccce
Confidence 9999997 799998863 89999999999999999999944 22399999999999999654 57899999876
Q ss_pred ecCC------------------CCcCCccccccccc---CCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHH
Q 002105 832 CTDS------------------KSINSSAYVAPETK---ESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEW 890 (966)
Q Consensus 832 ~~~~------------------~~~~~~~y~aPE~~---~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~ 890 (966)
.... ...+|+.|+|||++ .+..++.++|||||||++|||+||+.||..... . +.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~---~~ 261 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--L---RI 261 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--H---Hh
Confidence 4321 23478999999998 567789999999999999999999999864311 0 11
Q ss_pred HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
..... . . + .....+ .++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 262 ~~~~~-----~--~-~-~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 VNGKY-----S--I-P-PHDTQY------TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ----C-----C--C-C-TTCCSS------GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCcc-----c--C-C-cccccc------hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11000 0 0 0 001111 135567889999999999999999999998443
No 193
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.3e-34 Score=314.18 Aligned_cols=238 Identities=21% Similarity=0.325 Sum_probs=182.6
Q ss_pred ccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEc
Q 002105 689 TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEY 762 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey 762 (966)
..+|+|++|.||+|....++..||+|++.... ....+.+.+|+..+.+ ++|||||++++++.. ++..++||||
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-LQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHh-CCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 34789999999999998899999999986542 2233457778877777 699999999999875 4568999999
Q ss_pred cCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC----
Q 002105 763 IEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS---- 835 (966)
Q Consensus 763 ~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~---- 835 (966)
+++|+|.++++. +++..+..++.|++.||+|||.. .++|+||||||+||+++.+ ...++++|||.+.....
T Consensus 111 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~-~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 111 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCCTTSBE
T ss_pred cCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECC-CCCEEEeeCCCcccccccccc
Confidence 999999999963 89999999999999999999954 2239999999999999732 23578999998854322
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
...||+.|+|||.+.+ .++.++||||+||++|||+||+.||........ . ......... .+......+
T Consensus 189 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~---~~~~~~~~~-----~~~~~~~~~-- 256 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-I---YRRVTSGVK-----PASFDKVAI-- 256 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-H---HHHHTTTCC-----CGGGGGCCC--
T ss_pred cccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-H---HHHHhccCC-----ccccCCCCC--
Confidence 2468999999998864 589999999999999999999999975322211 1 111111111 011111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++..|++.||++|||++||++
T Consensus 257 ----~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 257 ----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 25677888999999999999999875
No 194
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.2e-35 Score=319.19 Aligned_cols=241 Identities=20% Similarity=0.301 Sum_probs=176.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
+.....+|+|++|.||+|+...+|..||||++.... .....++..|+..+.+.++|||||++++++.+++..++||||+
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehh
Confidence 344556799999999999998899999999986432 2223344555555556589999999999999999999999999
Q ss_pred CCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 764 EGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 764 ~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
+ |+|.++++ .+++..+..++.|++.||+|||.. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDD 163 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTC--CEEBCCC---------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCC--CEEEeecCCccccccc
Confidence 8 58888774 389999999999999999999943 2899999999999999654 57899999875421
Q ss_pred ---CCCcCCccccccccc----CCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 835 ---SKSINSSAYVAPETK----ESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~----~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
....||+.|+|||++ .+..++.++|||||||++|||+||+.||............... ..... .
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~-----~ 234 (290)
T 3fme_A 164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQ-----L 234 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH----SCCCC-----C
T ss_pred ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc----cCCCC-----c
Confidence 223689999999995 5667899999999999999999999999753222222211111 11000 0
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.....+ .++.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~------~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 PADKFS------AEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CTTTSC------HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccccCC------HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 001111 24667888999999999999999976
No 195
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-34 Score=320.90 Aligned_cols=246 Identities=19% Similarity=0.287 Sum_probs=189.9
Q ss_pred cccccCCCCCccEEEEEEEecCCcEE--EEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQF--VVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~v--avk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...++..+ |+|++... .....+.+.+|+..+.++.+|||||++++++.+++..|+||||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 107 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 107 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEec
Confidence 34456789999999999998888755 88888653 2334456788888887733899999999999999999999999
Q ss_pred cCCCCHHHHHH-------------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEE
Q 002105 763 IEGKELSEVLR-------------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLR 823 (966)
Q Consensus 763 ~~~g~L~~~l~-------------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~ 823 (966)
+++|+|.++++ .+++..+..++.|+++||+||| +.+|+||||||+||+++.+. .++
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~--~~k 182 (327)
T 1fvr_A 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY--VAK 182 (327)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG--CEE
T ss_pred CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCC--eEE
Confidence 99999999995 3789999999999999999999 45999999999999998654 578
Q ss_pred Eeccccceec-----CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhcc
Q 002105 824 LSVPGLAYCT-----DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSD 897 (966)
Q Consensus 824 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 897 (966)
++|||++... .....+++.|+|||++.+..++.++|||||||++|||+| |+.||.... .. +........
T Consensus 183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--~~---~~~~~~~~~ 257 (327)
T 1fvr_A 183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--CA---ELYEKLPQG 257 (327)
T ss_dssp ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--HH---HHHHHGGGT
T ss_pred EcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc--HH---HHHHHhhcC
Confidence 9999987532 122356788999999988889999999999999999998 999986532 11 111111111
Q ss_pred CcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 898 CHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 898 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
. .+......+ .++.+++.+|++.||++|||++|+++.|++++..
T Consensus 258 ~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 258 Y------RLEKPLNCD------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp C------CCCCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred C------CCCCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 011111111 2566788899999999999999999999986654
No 196
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.1e-34 Score=311.66 Aligned_cols=249 Identities=13% Similarity=0.136 Sum_probs=188.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEE-ecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVC-RSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~-~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...++..||||.+.... ..+.+..|+..+.+ ++|++++..++++ ..++..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~-l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 4hgt_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKM-MQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHH-HTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHH-hcCCCCCCeeeeecCCCCceEEEEEcc-
Confidence 44456789999999999998899999999865432 23467888888777 5777766666555 6678889999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecC-----
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~----- 834 (966)
+|+|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++. +....++++|||.+....
T Consensus 88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 999999986 4899999999999999999999 458999999999999931 123457899999986422
Q ss_pred --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc--hhhHHHHHHHhhccCcccccc
Q 002105 835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV--HESIVEWARYCYSDCHLDTWV 904 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 904 (966)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .............. .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------~ 238 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST------P 238 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS------C
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc------h
Confidence 1346899999999999999999999999999999999999999753221 12221111111110 0
Q ss_pred cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.+.....++ .++.+++..||+.||++|||++||++.|++++..
T Consensus 239 ~~~~~~~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 239 IEVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhhhccCC------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 000111111 2567788899999999999999999999996654
No 197
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.2e-34 Score=311.68 Aligned_cols=250 Identities=13% Similarity=0.136 Sum_probs=189.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEE-ecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVC-RSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~-~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...++..||||++.... ..+++.+|+..+.+ ++|++++..++++ ..++..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~-l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKM-MQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHH-HTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHH-hhcCCCCCccccccCCCCceEEEEEec-
Confidence 34455788999999999998899999999876433 23467888888877 5777766655555 6677889999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecC-----
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~----- 834 (966)
+|+|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++. +....++++|||.+....
T Consensus 88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 899999996 4899999999999999999999 458999999999999941 123457899999876421
Q ss_pred --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc--hhhHHHHHHHhhccCcccccc
Q 002105 835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV--HESIVEWARYCYSDCHLDTWV 904 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 904 (966)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .+............ .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------~ 238 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST------P 238 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS------C
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC------c
Confidence 2346899999999999999999999999999999999999999753221 11221111111110 0
Q ss_pred cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105 905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS 954 (966)
Q Consensus 905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~ 954 (966)
.+.+...++ .++.+++.+||+.||++|||++||++.|++++...
T Consensus 239 ~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 239 IEVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hHHHHhhCC------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 001111122 25667888999999999999999999999965543
No 198
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.7e-34 Score=312.70 Aligned_cols=238 Identities=20% Similarity=0.327 Sum_probs=186.5
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
....+|+|++|.||+|+...++..||||++..... ...+.+.+|+..+.+ ++||||+++++++.+++..++||||+++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (276)
T 2yex_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRREGNIQYLFLEYCSG 89 (276)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHh-cCCCCceeeeeEEEcCCEEEEEEEecCC
Confidence 34457889999999999988999999999864432 223456777777666 7999999999999999999999999999
Q ss_pred CCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--------C
Q 002105 766 KELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--------D 834 (966)
Q Consensus 766 g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--------~ 834 (966)
|+|.++++ .+++.....++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+... .
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 90 GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp EEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCCTTCEECEETTEECCB
T ss_pred CcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCC--CEEEeeCCCccccCCCcchhcc
Confidence 99999986 4899999999999999999999 45899999999999999654 4789999987532 2
Q ss_pred CCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 SKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....|++.|+|||...+..+ +.++|||||||++|||+||+.||............|... ... ..+ ....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~----~~~--~~~~~ 235 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KTY----LNP--WKKID 235 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT---CTT----STT--GGGSC
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc---ccc----cCc--hhhcC
Confidence 34568999999999987765 779999999999999999999997643322222222211 000 110 00111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++||++
T Consensus 236 ------~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 236 ------SAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ------HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 24567888999999999999999876
No 199
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-34 Score=337.33 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=185.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|+||.||+|+...+|+.||+|++..... ...+.+..|+..+.+ ++|||||++++++.+++..|+||||
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~-l~hp~Iv~l~~~~~~~~~l~lVmE~ 266 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHSRFIVSLAYAFETKTDLCLVMTI 266 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHh-cCCCCEeeEEEEEeeCCEEEEEEEe
Confidence 334557999999999999988999999999865322 223456778877777 6999999999999999999999999
Q ss_pred cCCCCHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 763 IEGKELSEVLRN-------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
++||+|.+++.. +++.....++.||+.||+||| +.+|+||||||+|||++.++ .++++|||++....
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g--~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKA 341 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTS--CEEECCCTTCEECCT
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCC--CEEEeecceeeeccC
Confidence 999999999863 789999999999999999999 45899999999999999654 58999999986532
Q ss_pred -----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105 835 -----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 835 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||........ ..+......... +...
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~~-------~~~p 413 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQA-------VTYP 413 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHCC-------CCCC
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhcc-------cCCC
Confidence 234799999999999999999999999999999999999999976432111 111111111110 0011
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCAS 941 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~ 941 (966)
...+ .++.+++.+|++.||++||++.
T Consensus 414 ~~~s------~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 414 DKFS------PASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp TTSC------HHHHHHHHHHSCSSGGGSCCCB
T ss_pred cccC------HHHHHHHHHhccCCHhHCCCCc
Confidence 1122 2456677899999999999863
No 200
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=321.50 Aligned_cols=245 Identities=17% Similarity=0.268 Sum_probs=186.2
Q ss_pred cccccccCCCCCccEEEEEEEecCCcEE----EEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 684 TEENLTSRGKKGVSSSYKVRSLANDMQF----VVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 684 ~~~~~~~~g~~g~~~vy~~~~~~~~~~v----avk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
++.....+|+|++|.||+|+...++..+ |+|++.... ....+.+.+|+..+.+ ++|||||+++++|..++ .++
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTT-CCBTTBCCCCEEEESSS-EEE
T ss_pred HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHh-CCCCCeeEEEEEEecCC-ceE
Confidence 3445567799999999999987777765 566554332 2234457778877777 69999999999998765 789
Q ss_pred EEEccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 759 VYEYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
||||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+ ..++++|||.+....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~--~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEET--TEEEECCTTC-----
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCC--CCEEEccCcceeEcc
Confidence 9999999999999963 889999999999999999999 4589999999999999865 468999999986421
Q ss_pred --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCccccccc
Q 002105 835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVD 905 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 905 (966)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+.+.... ....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~---~~~~----- 238 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEK---GERL----- 238 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHT---TCCC-----
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHc---CCCC-----
Confidence 12345778999999999999999999999999999999 9999975422 222122211 1100
Q ss_pred ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
......+ .++.+++.+||+.||++||++.|+++.|+++.+
T Consensus 239 -~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 239 -PQPPICT------IDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCccCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0111111 246678889999999999999999999998554
No 201
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=319.02 Aligned_cols=252 Identities=19% Similarity=0.293 Sum_probs=184.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+...+|..||||++...... ..+.+.+|+..+.+ ++|||||++++++..++..++||||+
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ-LKHPNLVNLLEVFRRKRRLHLVFEYC 84 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHh-CCCCCccchhheeecCCeEEEEEEeC
Confidence 3445678999999999999888999999998654322 23446778877777 69999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------ 834 (966)
++++|.++++ .+++.....++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp SEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECC------
T ss_pred CCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCC--CEEEeeCCCchhccCccccc
Confidence 9999999886 3899999999999999999999 45899999999999998654 57899999886532
Q ss_pred CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhcc------------Cccc
Q 002105 835 SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSD------------CHLD 901 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~~ 901 (966)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+.... +.. ......... ....
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV-DQL-YLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHH-HHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHH-HHHHHHhcccccccccccccccccc
Confidence 23468899999998865 67899999999999999999999999764221 111 111111000 0000
Q ss_pred --ccccccccCCCc-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 902 --TWVDPFIRGHVS-SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 902 --~~~d~~~~~~~~-~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...++....... .......++.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 001110000000 00011234677889999999999999999974
No 202
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.3e-34 Score=320.36 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=189.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec--CCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS--EKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~--~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+...++..||||++... ..+.+.+|+..+.++-.||||+++++++.. ....++||||+
T Consensus 39 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 39 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 4455679999999999999899999999998532 235678888888884349999999999987 66789999999
Q ss_pred CCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----CCCc
Q 002105 764 EGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-----SKSI 838 (966)
Q Consensus 764 ~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-----~~~~ 838 (966)
++++|.++++.+++..+..++.|++.||+||| +.+|+||||||+||+++.+. ..++++|||.+.... ....
T Consensus 116 ~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~ 191 (330)
T 3nsz_A 116 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEH-RKLRLIDWGLAEFYHPGQEYNVRV 191 (330)
T ss_dssp CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTT-TEEEECCCTTCEECCTTCCCCSCC
T ss_pred CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCC-CEEEEEeCCCceEcCCCCcccccc
Confidence 99999999999999999999999999999999 45899999999999998543 368999999986422 2346
Q ss_pred CCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHh--------hccCc----------
Q 002105 839 NSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYC--------YSDCH---------- 899 (966)
Q Consensus 839 ~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~--------~~~~~---------- 899 (966)
+++.|+|||.+.+ ..++.++|||||||++|||+||+.||.......+.+....... .....
T Consensus 192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (330)
T 3nsz_A 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271 (330)
T ss_dssp SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence 8899999999877 6789999999999999999999999865433222221111100 00000
Q ss_pred -----ccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 900 -----LDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 900 -----~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...| ......... .....++.+++.+|++.||++|||++|+++
T Consensus 272 ~~~~~~~~~-~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 272 LGRHSRKRW-ERFVHSENQ--HLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HCCCCCCCG-GGGCCTTTG--GGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhccccch-hhhcccccc--ccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 000000000 001235677888999999999999999986
No 203
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-34 Score=311.90 Aligned_cols=236 Identities=19% Similarity=0.261 Sum_probs=167.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|++|.||+|++..++..||+|++..... ...+.+.+|+..+.+ ++|||||++++++.+++..++|||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-LRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSCEEEEEE
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHh-CCCCCeEEEEEEEecCCeEEEEeh
Confidence 3445567999999999999988999999999865322 123346677777766 799999999999999999999999
Q ss_pred ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
|+ +|+|.+++. .+++.++..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 94 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 94 YA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTS--CEEECCSSCC--------
T ss_pred hc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCC--CEEEeecccceeccCccc
Confidence 99 678888875 3899999999999999999999 45899999999999999654 47899999875422
Q ss_pred -CCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....||+.|+|||.+.+..+ +.++|||||||++|||+||+.||.... .....+... .. .. .+....
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~---~~-~~------~~~~~~ 235 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNIS---NG-VY------TLPKFL 235 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HT-CC------CCCTTS
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH---hC-CC------CCCccC
Confidence 23468999999999988765 789999999999999999999997542 111111111 10 00 011112
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+ .++.+++.+|++.||++|||++|+++
T Consensus 236 ~------~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 236 S------PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp C------HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred C------HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 2 24567888999999999999999875
No 204
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.6e-34 Score=315.73 Aligned_cols=240 Identities=17% Similarity=0.223 Sum_probs=185.6
Q ss_pred cCCCCCccEEEEEEE--ecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 690 SRGKKGVSSSYKVRS--LANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~--~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.+|+|++|.||+|.. ...+..||||++..... ...+++.+|+..+.+ ++||||+++++++ ..+..++||||+++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ-LDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHT-CCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHh-CCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 468899999999954 45567899998864322 123457788888877 6999999999999 56678999999999
Q ss_pred CCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--------
Q 002105 766 KELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------- 834 (966)
Q Consensus 766 g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------- 834 (966)
|+|.++++. +++.....++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 102 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~ 176 (291)
T 1xbb_A 102 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKA 176 (291)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC
T ss_pred CCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCC--cEEEccCCcceeeccCCCcccc
Confidence 999999963 8999999999999999999994 5899999999999998654 67899999876432
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.... ...+.+.+.. . .. +......
T Consensus 177 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~---~-~~-----~~~~~~~ 245 (291)
T 1xbb_A 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEK---G-ER-----MGCPAGC 245 (291)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHT---T-CC-----CCCCTTC
T ss_pred cccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHc---C-CC-----CCCCCCC
Confidence 12245688999999988889999999999999999999 999987532 1222122211 1 10 1111122
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ .++.+++.+||+.||++||++.||+++|++++..
T Consensus 246 ~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 246 P------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp C------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 2 2566788899999999999999999999996654
No 205
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.8e-35 Score=326.16 Aligned_cols=241 Identities=20% Similarity=0.297 Sum_probs=185.2
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
+.....+|+|++|.||+|+...+|..||||++.... .....++..|+....+.++|||||++++++..++..|+||||+
T Consensus 53 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (340)
T 3an0_A 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 132 (340)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCC
T ss_pred eeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHh
Confidence 344556799999999999998899999999986542 2233456666666566689999999999999999999999999
Q ss_pred CCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-
Q 002105 764 EGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS- 835 (966)
Q Consensus 764 ~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~- 835 (966)
++ +|.++++ .+++..+..++.||+.||+|||.. .+|+||||||+||+++.+. .++++|||++.....
T Consensus 133 ~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 133 DT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDS 207 (340)
T ss_dssp SE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTT--CEEECCCSHHHHHSCH
T ss_pred hC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCC--CEEEeeCCCceecccc
Confidence 85 9988875 489999999999999999999942 2899999999999999654 578999998754321
Q ss_pred ----CCcCCcccccccccC----CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 836 ----KSINSSAYVAPETKE----SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 836 ----~~~~~~~y~aPE~~~----~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
...||+.|+|||++. ...++.++|||||||++|||+||+.||.........+.+.. ..... . .
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~----~~~~~-~-~--- 278 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV----EEPSP-Q-L--- 278 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH----HSCCC-C-C---
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHh----cCCCC-C-C---
Confidence 246899999999964 44789999999999999999999999975322222221111 11100 0 0
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
....++ .++.+++.+||+.||++|||+.||++
T Consensus 279 ~~~~~~------~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 PADKFS------AEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CGGGSC------HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcccCC------HHHHHHHHHHccCCcccCcCHHHHhc
Confidence 001111 35677888999999999999999986
No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.9e-34 Score=336.93 Aligned_cols=241 Identities=21% Similarity=0.332 Sum_probs=188.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEecc--CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV--NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+...++..||||++... .......+.+|+..+.+ ++|||||++++++..++..|+|||||
T Consensus 25 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~ 103 (486)
T 3mwu_A 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK-LDHPNIMKLFEILEDSSSFYIVGELY 103 (486)
T ss_dssp EEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHh-CCCCCcCeEEEEEEcCCEEEEEEEcC
Confidence 4455678999999999999889999999998643 22334567888888877 69999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-CCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK-DEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~-~~~~~~~~~~~~~~~~~----- 834 (966)
++|+|.+++. .+++.....++.||+.||+||| +.+|+||||||+||+++.. ....++++|||++....
T Consensus 104 ~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 180 (486)
T 3mwu_A 104 TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180 (486)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence 9999999885 4899999999999999999999 4589999999999999753 34568999999886422
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
....||+.|+|||++.+ .|+.++||||+||++|||+||+.||.+.. ..+.. ..+.. . .... ..|.. ...+
T Consensus 181 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~-~~i~~---~-~~~~-~~~~~-~~~s- 250 (486)
T 3mwu_A 181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-EYDIL-KRVET---G-KYAF-DLPQW-RTIS- 250 (486)
T ss_dssp -CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHH-HHHHH---T-CCCS-CSGGG-GGSC-
T ss_pred CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHH-HHHHh---C-CCCC-CCccc-CCCC-
Confidence 23468999999999875 58999999999999999999999997542 11111 11111 1 0000 00111 1111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 251 -----~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 251 -----DDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -----HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 24667888999999999999999986
No 207
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-34 Score=321.65 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=183.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
+.....+|+|++|.||+|+...++..||||++..... ...+.+.+|+..+.+ ++|||||++++++.+++..++||||
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE-LQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGG-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHH-cCCCCcceEEEEEecCCEEEEEEec
Confidence 4556677999999999999988999999998854322 224457788888877 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC---CCceEEEeccccceecC--
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK---DEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~---~~~~~~~~~~~~~~~~~-- 834 (966)
++ |+|.+++. .+++..+..++.||+.||+|||. .+|+||||||+||+++.+ ....++++|||.+....
T Consensus 115 ~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 115 AE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp CS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred CC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 99 59999986 38999999999999999999994 589999999999999642 34568999999875421
Q ss_pred ----CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhh-c-cCcc------c
Q 002105 835 ----SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCY-S-DCHL------D 901 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~------~ 901 (966)
....+|+.|+|||++.+. .++.++|||||||++|||+||+.||..... .+.......... . .... .
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-IDQLFKIFEVLGLPDDTTWPGVTALP 269 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-HHHHHHHHHHhCCCchhhhhhhhhhh
Confidence 234679999999998774 489999999999999999999999976422 222212221110 0 0000 0
Q ss_pred cccc--ccccCCCcchHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 902 TWVD--PFIRGHVSSIQN-----EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 902 ~~~d--~~~~~~~~~~~~-----~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.|.. |.... ..... ...++.+++.+|++.||++|||++|+++
T Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 270 DWKQSFPKFRG--KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TCCTTCCCCCC--CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcc--ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 00000 00000 1135678889999999999999999875
No 208
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-34 Score=317.79 Aligned_cols=244 Identities=17% Similarity=0.255 Sum_probs=182.1
Q ss_pred ccccCCCCCccEEEEEEEec---CCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCC-----ee
Q 002105 687 NLTSRGKKGVSSSYKVRSLA---NDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK-----AA 756 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~---~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~-----~~ 756 (966)
....+|+|++|.||+|+... ++..||+|++..... ...+.+.+|+..+.+ ++|||||++++++.+.+ ..
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~ 116 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKD-FSHPNVIRLLGVCIEMSSQGIPKP 116 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHT-CCCTTBCCCCEEEEC-------CE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhc-CCCCCeeeeeEEEeeccccCCccc
Confidence 34456899999999998765 345799998754322 223457788888877 69999999999998755 35
Q ss_pred EEEEEccCCCCHHHHHH---------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecc
Q 002105 757 YLVYEYIEGKELSEVLR---------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVP 827 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~ 827 (966)
++||||+++|+|.+++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.+. .++++||
T Consensus 117 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~--~~kl~Df 191 (313)
T 3brb_A 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDM--TVCVADF 191 (313)
T ss_dssp EEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTS--CEEECSC
T ss_pred EEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCC--cEEEeec
Confidence 99999999999999983 3899999999999999999999 56999999999999998654 5789999
Q ss_pred ccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccC
Q 002105 828 GLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDC 898 (966)
Q Consensus 828 ~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 898 (966)
|.+.... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||..... ....+... ...
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~---~~~ 266 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLL---HGH 266 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHH---TTC
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHH---cCC
Confidence 9875421 22346778999999999999999999999999999999 8889865421 11212211 111
Q ss_pred cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 899 HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 899 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
. +.....++ .++.+++.+||+.||++|||+.|+++.|++.+..
T Consensus 267 ~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 267 R------LKQPEDCL------DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp C------CCCBTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C------CCCCcccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0 11111122 2566788899999999999999999999985543
No 209
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.1e-34 Score=316.42 Aligned_cols=239 Identities=20% Similarity=0.307 Sum_probs=182.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|++|.||+|+...++..||+|++........+.+.+|+..+.+ ++|||||++++++..++..++||||+++
T Consensus 22 ~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T 2j7t_A 22 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT-CDHPYIVKLLGAYYHDGKLWIMIEFCPG 100 (302)
T ss_dssp EEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHH-CCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred eecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhc-CCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence 344567899999999999988899999998866554455678888888877 6999999999999999999999999999
Q ss_pred CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee------cCC
Q 002105 766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC------TDS 835 (966)
Q Consensus 766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~------~~~ 835 (966)
|+|.+++. .+++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+.. ...
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 101 GAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTS--CEEECCCHHHHHHHHHHHC--
T ss_pred CcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCC--CEEEEECCCCccccccccccc
Confidence 99999885 38999999999999999999994 5899999999999998654 578999997632 123
Q ss_pred CCcCCccccccccc-----CCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 836 KSINSSAYVAPETK-----ESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 836 ~~~~~~~y~aPE~~-----~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
...||+.|+|||++ ....++.++|||||||++|||+||+.||.... .......... ... ..... ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~----~~~-~~~~~---~~ 246 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-PMRVLLKIAK----SDP-PTLLT---PS 246 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHH----SCC-CCCSS---GG
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-HHHHHHHHhc----cCC-cccCC---cc
Confidence 45689999999987 46778999999999999999999999987532 1111111111 100 00000 11
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++ .++.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~------~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 247 KWS------VEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp GSC------HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccC------HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111 24667888999999999999999875
No 210
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=319.21 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=182.2
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
....+|+|++|.||+|+...++..||||++..... .....+.+|+..+.+ ++|||||++++++..++..++||||++
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~- 83 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIIHTEKSLTLVFEYLD- 83 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSC-CCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHh-cCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence 34567899999999999988999999999864332 233456678888777 699999999999999999999999998
Q ss_pred CCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------C
Q 002105 766 KELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------S 835 (966)
Q Consensus 766 g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------~ 835 (966)
|+|.+++.. +++.....++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+.... .
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 84 KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTC--CEEECSSSEEECC--------
T ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCC--CEEEccCcccccccCCccccc
Confidence 599998863 889999999999999999999 45899999999999999664 57899999876422 2
Q ss_pred CCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc---------
Q 002105 836 KSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD--------- 905 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--------- 905 (966)
...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+... .+.. ..+...........|..
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-EEQL-HFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHHHHhCCCChHhchhhhcchhhcc
Confidence 3367999999999876 5689999999999999999999999976421 1222 22222111111111000
Q ss_pred ---ccccCCC--cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 906 ---PFIRGHV--SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 906 ---~~~~~~~--~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+...... ........++.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 000001134667889999999999999999975
No 211
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.3e-35 Score=331.59 Aligned_cols=190 Identities=26% Similarity=0.402 Sum_probs=152.3
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEecc--CcccccchHHHHHHHHhhcCCCceeEEeeEEecCC--eeEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV--NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK--AAYLVY 760 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~--~~~lv~ 760 (966)
+.....+|+|++|.||+|++..+|..||||++... .....+.+.+|+..+.++..|||||++++++..++ ..|+||
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~ 90 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF 90 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence 34556689999999999999899999999998543 22234456788888888534999999999997544 689999
Q ss_pred EccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 761 EYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 761 Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
|||+ |+|.++++ .+++..+..++.|+++||+||| +.+|+||||||+|||++.+. .++++|||++....
T Consensus 91 e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 91 DYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp ECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEESSSCCC
T ss_pred cccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCC--CEEecCCccccccccccc
Confidence 9998 69999987 4899999999999999999999 45899999999999999654 57999999885421
Q ss_pred -----------------------CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 835 -----------------------SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 835 -----------------------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
...+||+.|+|||++.+ ..++.++||||+||++|||+||+.||.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22468999999999876 67899999999999999999999999764
No 212
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.1e-34 Score=311.19 Aligned_cols=236 Identities=22% Similarity=0.295 Sum_probs=187.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...++..||+|++.... ....+.+.+|+..+.+ ++||||+++++++.+++..++||||
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 95 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH-LRHPNILRMYNYFHDRKRIYLMLEF 95 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhc-CCCCCEeeEEEEEEcCCEEEEEEEe
Confidence 34455788999999999998889999999986432 1223456777777777 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----C
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----S 835 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----~ 835 (966)
+++|+|.+++. .+++.....++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+.... .
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~ 170 (284)
T 2vgo_A 96 APRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKG--ELKIADFGWSVHAPSLRRR 170 (284)
T ss_dssp CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTC--CEEECCCTTCEECSSSCBC
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCC--CEEEecccccccCcccccc
Confidence 99999999986 3899999999999999999999 56999999999999998654 57899999875432 3
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
...|++.|+|||.+.+..++.++||||||+++|||++|+.||..... .+. ...... .+.......+
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~----~~~~~~-------~~~~~~~~~~-- 236 (284)
T 2vgo_A 171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-TET----HRRIVN-------VDLKFPPFLS-- 236 (284)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHH----HHHHHT-------TCCCCCTTSC--
T ss_pred cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-hHH----HHHHhc-------cccCCCCcCC--
Confidence 34689999999999999999999999999999999999999875321 111 111111 0111111222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 237 ----~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 237 ----DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 24567888999999999999999985
No 213
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-34 Score=314.96 Aligned_cols=244 Identities=20% Similarity=0.298 Sum_probs=180.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+++. ...||||++..... ...+.|.+|+..+.+ ++|||||++++++ ..+..++||||+
T Consensus 27 ~~~~~lG~G~~g~Vy~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~-~~~~~~lv~e~~ 101 (289)
T 3og7_A 27 TVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNILLFMGYS-TAPQLAIVTQWC 101 (289)
T ss_dssp EEEEEEEECSSEEEEEEES---SSEEEEEEESCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred eeeeEecCCCCeEEEEEEE---cCceEEEEEeccCCCHHHHHHHHHHHHHHHh-CCCCcEEEEEeec-cCCccEEEEEec
Confidence 3345678999999999975 23589998854322 223457788888777 7999999999976 456689999999
Q ss_pred CCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 764 EGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 764 ~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
++|+|.++++ .+++.++..++.|++.||+||| +.+|+||||||+||+++.+ ..++++|||.+....
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 102 EGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHED--NTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETT--TEEEECCCC-----------
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCC--CCEEEccceecccccccccc
Confidence 9999999995 4899999999999999999999 4589999999999999865 468899999875321
Q ss_pred ---CCCcCCcccccccccC---CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccc
Q 002105 835 ---SKSINSSAYVAPETKE---SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI 908 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 908 (966)
....||+.|+|||.+. +..++.++|||||||++|||+||+.||..... .+.+.+.+........ . +..
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~----~-~~~ 250 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIEMVGRGSLSPD----L-SKV 250 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-HHHHHHHHHHTSCCCC----T-TSS
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-HHHHHHHhcccccCcc----h-hhc
Confidence 2246899999999886 66788899999999999999999999975422 2222222221110000 0 001
Q ss_pred cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 909 RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
...++ .++.+++.+|++.||++|||++|++++|+++.
T Consensus 251 ~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 251 RSNCP------KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cccCC------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11122 35677888999999999999999999999844
No 214
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.8e-34 Score=346.94 Aligned_cols=235 Identities=18% Similarity=0.251 Sum_probs=188.0
Q ss_pred ccccccccCCCCCccEEEEEEEecCCcEEEEEEEecc---CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 683 TTEENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV---NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 683 ~~~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~---~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
.++..+..+|+|+||.||+|+...++..||||++... .....+.+..|...+.+..+||||+++++++.+.+..|+|
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 3455667789999999999999889999999998643 2223344667777777655899999999999999999999
Q ss_pred EEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---
Q 002105 760 YEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--- 833 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--- 833 (966)
|||++||+|.++++ .+++..+..++.||+.||+||| +.+||||||||+|||+|.++ +++++|||++...
T Consensus 421 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g--~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWD 495 (674)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSS--CEEECCCTTCEECCCT
T ss_pred EeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCC--cEEEeecceeeccccC
Confidence 99999999999996 4899999999999999999999 45999999999999999654 6899999998642
Q ss_pred ---CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 834 ---DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 834 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.. ...+ ....... . +....
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--~~~~---~~~i~~~-~------~~~p~ 563 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDEL---FQSIMEH-N------VAYPK 563 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHH---HHHHHSS-C------CCCCT
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--HHHH---HHHHHhC-C------CCCCc
Confidence 234578999999999999999999999999999999999999997642 1111 1111111 0 01111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCA 940 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~ 940 (966)
..+ .++.+++..|++.||++||++
T Consensus 564 ~~s------~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 564 SMS------KEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp TSC------HHHHHHHHHHSCSSSTTCTTC
T ss_pred cCC------HHHHHHHHHHccCCHHHCCCC
Confidence 222 246677889999999999997
No 215
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.6e-35 Score=315.64 Aligned_cols=244 Identities=23% Similarity=0.301 Sum_probs=186.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEe--cCCeeEEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCR--SEKAAYLVYE 761 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~--~~~~~~lv~E 761 (966)
.....+|+|++|.||+++...++..||+|++.... ....+.+.+|+..+.+ ++|||||++++++. .++..++|||
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-LKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHh-cCCCCCCeEEEEEecCCCceEEEEEe
Confidence 34456788999999999998899999999986432 2223457788888777 69999999999885 4678999999
Q ss_pred ccCCCCHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhhcC--CCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 762 YIEGKELSEVLRN-------LSWERRRKVAIGIAKALRFLHFHC--SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 762 y~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~l~yLH~~~--~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
|+++|+|.+++.. +++..+..++.|++.||+|||... ..+|+||||||+||+++.+. .++++|||.+..
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~--~~kl~dfg~~~~ 165 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARI 165 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS--CEEECCCCHHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC--CEEEecCchhee
Confidence 9999999999963 899999999999999999999652 12399999999999998654 578999998754
Q ss_pred cCC------CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 833 TDS------KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 833 ~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
... ...|++.|+|||.+.+..++.++||||||+++|||+||+.||.... ...+.+.... ....
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~----~~~~----- 234 (279)
T 2w5a_A 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIRE----GKFR----- 234 (279)
T ss_dssp C---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH----TCCC-----
T ss_pred eccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--HHHHHHHHhh----cccc-----
Confidence 322 1257899999999998899999999999999999999999987532 1111121111 1111
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
.+...++ .++.+++.+||+.||++||++.||++.+..
T Consensus 235 ~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 235 RIPYRYS------DELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cCCcccC------HHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1111222 246677889999999999999999987654
No 216
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.1e-35 Score=319.76 Aligned_cols=247 Identities=17% Similarity=0.261 Sum_probs=170.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
+.....+|+|++|.||+|+...++..||||++.... ....+++.+|+..+.+ ++|||||++++++..++..++||||+
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~ 95 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ-CHHPNIVSYYTSFVVKDELWLVMKLL 95 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCC-CCCTTBCCEEEEEESSSCEEEEEECC
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhh-cCCCCEeeEEEEEeecCCcEEEehhc
Confidence 344556799999999999988889999999875432 2334567778777777 69999999999999999999999999
Q ss_pred CCCCHHHHHHc-----------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 764 EGKELSEVLRN-----------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 764 ~~g~L~~~l~~-----------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
++|+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+..
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~ 170 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDG--SVQIADFGVSAF 170 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTC--CEEECCCHHHHH
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCC--CEEEEeccchhe
Confidence 99999999863 8899999999999999999994 5899999999999998654 478999998643
Q ss_pred cC-----------CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcc
Q 002105 833 TD-----------SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHL 900 (966)
Q Consensus 833 ~~-----------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 900 (966)
.. ....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||..... .... ............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~-~~~~~~~~~~~~ 248 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP-MKVL-MLTLQNDPPSLE 248 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG-GGHH-HHHHTSSCCCTT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch-hhHH-HHHhccCCCccc
Confidence 21 22368899999998865 5689999999999999999999999975422 1111 111100000000
Q ss_pred cccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 901 DTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 901 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
....++.....++ .++.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLKKYG------KSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----CCCCCCC------HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhh------HHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0111111112222 24667888999999999999999975
No 217
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.7e-34 Score=316.46 Aligned_cols=243 Identities=21% Similarity=0.337 Sum_probs=182.7
Q ss_pred cccCCCCCccEEEEEEEecCC---cEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEe-cCCeeEEEEEc
Q 002105 688 LTSRGKKGVSSSYKVRSLAND---MQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCR-SEKAAYLVYEY 762 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~---~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~-~~~~~~lv~Ey 762 (966)
...+|+|++|.||+|+...++ ..+|+|++..... ...+.+.+|+..+.+ ++|||||+++++|. .++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-FSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHT-CCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHh-CCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 345789999999999864433 3578888764332 223457788887777 69999999999975 45678999999
Q ss_pred cCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----
Q 002105 763 IEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----- 833 (966)
Q Consensus 763 ~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----- 833 (966)
+++|+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+...
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEY 183 (298)
T ss_dssp CTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTC--CEEECSCGGGCCCSCGGG
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCC--CEEECcccccccccccch
Confidence 999999999964 789999999999999999999 45899999999999998654 5789999988532
Q ss_pred -----CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcC-CCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 834 -----DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTG-KSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 834 -----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
.....+|+.|+|||.+.+..++.++||||||+++|||+|| .+|+... ...+.. .... .... +.
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~~~-~~~~---~~~~------~~ 252 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDIT-VYLL---QGRR------LL 252 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-CTTTHH-HHHH---TTCC------CC
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-CHHHHH-HHHh---cCCC------CC
Confidence 1223567789999999988999999999999999999995 5555432 222221 1111 1110 00
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
.....+ .++.+++.+|++.||++|||++|++++|++++..
T Consensus 253 ~~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 253 QPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111122 2466788899999999999999999999996553
No 218
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.4e-34 Score=312.68 Aligned_cols=237 Identities=21% Similarity=0.294 Sum_probs=187.5
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+++...++..||+|.+..... ...+.+.+|+..+.+ ++|||||++++++.+++..++||||
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 18 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS-LAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHh-CCCCCEeeeeeeeccCCEEEEEEec
Confidence 344567899999999999988899999998865422 223456777777777 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+++++|.+++. .+++.++..++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 97 ~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~ 171 (294)
T 2rku_A 97 CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGER 171 (294)
T ss_dssp CTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTC--CEEECCCTTCEECCSTTCC
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCC--CEEEEeccCceecccCccc
Confidence 99999999886 48999999999999999999994 5899999999999999654 57899999876432
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||.+.+..++.++||||||+++|||+||+.||..... .+.. .. ... ... .+....+
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~---~~-~~~-~~~------~~~~~~~ 239 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-KETY---LR-IKK-NEY------SIPKHIN 239 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHH---HH-HHT-TCC------CCCTTSC
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHH---HH-Hhh-ccC------CCccccC
Confidence 234688999999999999999999999999999999999999975321 1111 11 111 000 1111121
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
.++.+++.+|++.||++|||++|+++.
T Consensus 240 ------~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 ------PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 245677889999999999999999863
No 219
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-34 Score=312.86 Aligned_cols=240 Identities=18% Similarity=0.279 Sum_probs=187.8
Q ss_pred cCCCCCccEEEEEEEe--cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 690 SRGKKGVSSSYKVRSL--ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~--~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
.+|+|++|.||+|... .++..||||++..... ...+.+.+|+..+.+ ++|||||++++++ ..+..++||||+++|
T Consensus 17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ-LDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHh-CCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 4789999999999853 4677899999865422 234557788888877 6999999999999 456789999999999
Q ss_pred CHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--------
Q 002105 767 ELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------- 834 (966)
Q Consensus 767 ~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------- 834 (966)
+|.+++. .+++..+..++.|+++||+||| ..+|+||||||+||+++.+ ..++++|||.+....
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~~~~~~~~~ 169 (287)
T 1u59_A 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALGADDSYYTA 169 (287)
T ss_dssp EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEET--TEEEECCCTTCEECTTCSCEECC
T ss_pred CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCC--CCEEECcccceeeeccCcceeec
Confidence 9999994 3899999999999999999999 4589999999999999865 468899999876431
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV 912 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 912 (966)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+.+.+.. ... +......
T Consensus 170 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~---~~~------~~~~~~~ 238 (287)
T 1u59_A 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQ---GKR------MECPPEC 238 (287)
T ss_dssp CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHT---TCC------CCCCTTC
T ss_pred cccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhc---CCc------CCCCCCc
Confidence 12345788999999988889999999999999999999 9999875422 112122211 110 1111122
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
+ .++.+++..||+.||++||++.||++.|++++..
T Consensus 239 ~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 239 P------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp C------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2 2566788899999999999999999999986554
No 220
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-34 Score=320.66 Aligned_cols=245 Identities=16% Similarity=0.276 Sum_probs=189.8
Q ss_pred cccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCcc-cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNTI-TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~~-~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv 759 (966)
.....+|+|++|.||+|+.. .++..||||++...... ....+.+|+..+.+ ++||||+++++++.+++..++|
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv 106 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQPTLVI 106 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGG-CCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHh-cCCCCEeeeEEEEccCCccEEE
Confidence 34456789999999999875 35678999988643322 23357778877777 6999999999999999999999
Q ss_pred EEccCCCCHHHHHHc-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEec
Q 002105 760 YEYIEGKELSEVLRN-------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSV 826 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~-------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~ 826 (966)
|||+++|+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|
T Consensus 107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~--~~kl~D 181 (322)
T 1p4o_A 107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDF--TVKIGD 181 (322)
T ss_dssp EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTC--CEEECC
T ss_pred EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCC--eEEECc
Confidence 999999999999853 4889999999999999999994 5899999999999999654 578999
Q ss_pred cccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhcc
Q 002105 827 PGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSD 897 (966)
Q Consensus 827 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 897 (966)
||.+... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... .....+.+ ...
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~---~~~ 256 (322)
T 1p4o_A 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--NEQVLRFV---MEG 256 (322)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--HHHHHHHH---HTT
T ss_pred CccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC--HHHHHHHH---HcC
Confidence 9987532 123356788999999988889999999999999999999 888986531 11111211 111
Q ss_pred CcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105 898 CHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI 953 (966)
Q Consensus 898 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~ 953 (966)
... ......+ .++.+++.+|++.||++|||+.|+++.|++.+.+
T Consensus 257 ~~~------~~~~~~~------~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 257 GLL------DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp CCC------CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CcC------CCCCCCC------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 110 0111121 2466788899999999999999999999985443
No 221
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=320.07 Aligned_cols=248 Identities=19% Similarity=0.250 Sum_probs=188.9
Q ss_pred cccccCCCCCccEEEEEEE----ecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCC--eeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRS----LANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK--AAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~----~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~--~~~lv 759 (966)
.....+|+|++|.||+++. ..++..||||++........+.+.+|+..+.+ ++|||||++++++...+ ..++|
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHT-CCCTTBCCEEEEECC----CCEEE
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEEecCCCceEEE
Confidence 4456679999999999983 46788999999876544445568888888887 69999999999987654 78999
Q ss_pred EEccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 760 YEYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|||+++|+|.++++. +++.++..++.|+++||+||| ..+|+||||||+||+++.+ ..++++|||.+....
T Consensus 123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~--~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCC--CcEEEecCcchhhccc
Confidence 999999999999963 899999999999999999999 4599999999999999865 468899999886432
Q ss_pred --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc----------hhhHHHHHHHhhc
Q 002105 835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV----------HESIVEWARYCYS 896 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~----------~~~~~~~~~~~~~ 896 (966)
....++..|+|||.+.+..++.++|||||||++|||+||+.|+...... .............
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 1234567899999998888999999999999999999999987532100 0000000000010
Q ss_pred cCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHh
Q 002105 897 DCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESC 950 (966)
Q Consensus 897 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~ 950 (966)
... .+.....+ ..++.+++.+||+.||++|||+.||+++|+++
T Consensus 278 ~~~-----~~~~~~~~------~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 278 NNG-----RLPRPDGC------PDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp TTC-----CCCCCTTC------CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cCC-----CCCCCCcc------cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 000 00011111 13567788899999999999999999999983
No 222
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.4e-34 Score=316.97 Aligned_cols=242 Identities=17% Similarity=0.238 Sum_probs=184.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--------ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--------ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--------~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
.....+|+|++|.||+|+...++..||||.+..... .....+.+|+..+.+ ++|||||++++++..++ .|
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~-~~ 90 (322)
T 2ycf_A 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK-LNHPCIIKIKNFFDAED-YY 90 (322)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHH-CCCTTBCCEEEEEESSS-EE
T ss_pred eEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHh-CCCCCCceEeeEEcCCc-eE
Confidence 344567899999999999988899999999854321 123457788888877 69999999999997765 89
Q ss_pred EEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceec
Q 002105 758 LVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCT 833 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~ 833 (966)
+||||+++|+|.+++. .+++.....++.||+.||+||| ..+|+||||||+||+++.+. ...++++|||.+...
T Consensus 91 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp EEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 9999999999999985 4899999999999999999999 45899999999999998654 345899999998754
Q ss_pred CCC-----CcCCccccccccc---CCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc
Q 002105 834 DSK-----SINSSAYVAPETK---ESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD 905 (966)
Q Consensus 834 ~~~-----~~~~~~y~aPE~~---~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 905 (966)
... ..||+.|+|||++ ....++.++|||||||++|||+||+.||........ +.+..... ... ..
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~----~~~--~~ 240 (322)
T 2ycf_A 168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSG----KYN--FI 240 (322)
T ss_dssp CCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHT----CCC--CC
T ss_pred ccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhC----ccc--cC
Confidence 332 3589999999986 356789999999999999999999999975432211 11211110 000 11
Q ss_pred ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
|...... ..++.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~------~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 241 PEVWAEV------SEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhhc------CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111111 135667888999999999999999873
No 223
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.3e-35 Score=334.74 Aligned_cols=229 Identities=13% Similarity=0.132 Sum_probs=173.2
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHH---HHHhhcCCCceeEEe-------eEEecC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVS---QFGKLIMHPNIVRLH-------GVCRSE 753 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~---~~~~~~~H~niv~l~-------g~~~~~ 753 (966)
....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+. .+.+ ++|||||+++ +++..+
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~-l~hpniv~~~~~~~~~~~~~~~~ 155 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG-IKNQKQAKVHLRFIFPFDLVKDP 155 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT-CCSHHHHHHHHCBCCCSEEEECT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc-cCCHHHHHHHhhhhhhhhhhhcc
Confidence 34567999999999999888899999999874322 22345677774 3434 5899999998 666655
Q ss_pred C-----------------eeEEEEEccCCCCHHHHHHc---CC-------HHHHHHHHHHHHHHHHHHhhcCCCCeEeec
Q 002105 754 K-----------------AAYLVYEYIEGKELSEVLRN---LS-------WERRRKVAIGIAKALRFLHFHCSPSVVAGD 806 (966)
Q Consensus 754 ~-----------------~~~lv~Ey~~~g~L~~~l~~---l~-------~~~~~~i~~~ia~~l~yLH~~~~~~iiHrD 806 (966)
+ ..|+||||+ +|+|.++++. ++ |..+..++.||++||+|||. .+|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrD 231 (377)
T 3byv_A 156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTY 231 (377)
T ss_dssp TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence 3 289999999 6899999963 33 58888999999999999994 5899999
Q ss_pred CCCCcEEEcCCCCceEEEeccccceecC---CCCcCCcccccccccCCC-----------CCCCcchHHHHHHHHHHHHc
Q 002105 807 VSPGKVIVDGKDEPHLRLSVPGLAYCTD---SKSINSSAYVAPETKESK-----------DITEKGDIYGFGLILIDLLT 872 (966)
Q Consensus 807 lk~~Nill~~~~~~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~S~Gv~l~el~t 872 (966)
|||+|||++.+. .++++|||++.... ....| +.|+|||++.+. .++.++|||||||++|||+|
T Consensus 232 ikp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 232 LRPVDIVLDQRG--GVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp CCGGGEEECTTC--CEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCC--CEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 999999999664 57999999987533 23456 999999999877 89999999999999999999
Q ss_pred CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 873 GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 873 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
|+.||....... .... +.+.. ...+ .++.+++.+||+.||++|||+.|+++
T Consensus 309 g~~Pf~~~~~~~--------------~~~~-~~~~~-~~~~------~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 309 ADLPITKDAALG--------------GSEW-IFRSC-KNIP------QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SSCCC------C--------------CSGG-GGSSC-CCCC------HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCCccccccc--------------chhh-hhhhc-cCCC------HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999986431100 0000 00000 1122 24667888999999999999999974
No 224
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-34 Score=313.12 Aligned_cols=239 Identities=22% Similarity=0.329 Sum_probs=182.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecC-CeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-KAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||++.. .|..||||++.... ..+.+.+|+..+.+ ++|||||++++++.++ +..++||||++
T Consensus 24 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp EEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTT-CCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred eEEeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 4455678899999999986 58899999875432 34567888888877 6999999999997654 47899999999
Q ss_pred CCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---CC
Q 002105 765 GKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---SK 836 (966)
Q Consensus 765 ~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---~~ 836 (966)
+|+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+.... ..
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTS--CEEECCCCC----------
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCC--cEEEeeccccccccccccC
Confidence 9999999963 899999999999999999999 45899999999999998654 57899999875432 23
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
..+++.|+|||.+.+..++.++||||||+++|||+| |+.||.... ...+...+. .. ..+.....++
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~---~~------~~~~~~~~~~-- 240 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVE---KG------YKMDAPDGCP-- 240 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHT---TT------CCCCCCTTCC--
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHh---cC------CCCCCcccCC--
Confidence 356889999999988899999999999999999999 999987532 111211111 11 0111111222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.++.+++.+||+.||++|||+.|+++.|++ ++
T Consensus 241 ----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~-i~ 272 (278)
T 1byg_A 241 ----PAVYEVMKNCWHLDAAMRPSFLQLREQLEH-IK 272 (278)
T ss_dssp ----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH-HH
T ss_pred ----HHHHHHHHHHhcCChhhCCCHHHHHHHHHH-HH
Confidence 256678889999999999999999999998 44
No 225
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.6e-33 Score=316.46 Aligned_cols=252 Identities=19% Similarity=0.347 Sum_probs=185.0
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--cccchHHHHHHHHhhcCCCceeEEeeEEec--------CC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--TTSSFWPDVSQFGKLIMHPNIVRLHGVCRS--------EK 754 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--~~~~~~~e~~~~~~~~~H~niv~l~g~~~~--------~~ 754 (966)
+.....+|+|++|.||+|+...+|..||||++...... ....+.+|+..+.+ ++|||||++++++.. ++
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHH-CCCTTBCCEEEEEEEC--------C
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHh-ccCCCcccHhheeeccccccccCCc
Confidence 34556689999999999999889999999988544322 23356788888777 699999999999987 44
Q ss_pred eeEEEEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 755 AAYLVYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 755 ~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
..++||||+++ +|.+.+. .+++.++..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a 171 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDG--VLKLADFGLA 171 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTC
T ss_pred eEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCC--CEEEccchhc
Confidence 68999999995 7777775 4899999999999999999999 45899999999999999664 5789999987
Q ss_pred eecC----------CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc
Q 002105 831 YCTD----------SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH 899 (966)
Q Consensus 831 ~~~~----------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 899 (966)
.... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+... .+.. ...........
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~-~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE-QHQL-ALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh-HHHH-HHHHHHhCCCC
Confidence 5421 23467999999998876 5589999999999999999999999976422 1111 11111111100
Q ss_pred cccc--ccc--------cccCCCcchHHHH------HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 900 LDTW--VDP--------FIRGHVSSIQNEI------VEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 900 ~~~~--~d~--------~~~~~~~~~~~~~------~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...+ .+. ..........+.+ .++.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 000 0000111111111 24678899999999999999999886
No 226
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.9e-34 Score=313.10 Aligned_cols=238 Identities=18% Similarity=0.304 Sum_probs=189.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...++..||||.+..... ...+.+.+|+..+.+ ++||||+++++++..++..++||||++
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 25 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 345567899999999999988899999999865432 223557778877777 699999999999999999999999999
Q ss_pred CCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------CC
Q 002105 765 GKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------SK 836 (966)
Q Consensus 765 ~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------~~ 836 (966)
+|+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+.... ..
T Consensus 104 ~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 104 GGSALDLLEPGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTS--CEEECCCTTCEECBTTBCCBCC
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCC--CEEEeecccceecCccccccCc
Confidence 9999999964 8999999999999999999994 5899999999999998654 57899999875422 23
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
..||+.|+|||++.+..++.++|||||||++|||+||+.||.... ......... .. ..+.+...++
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~---~~------~~~~~~~~~~--- 244 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--PMKVLFLIP---KN------NPPTLEGNYS--- 244 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHH---HS------CCCCCCSSCC---
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--HHHHHHHhh---cC------CCCCCccccC---
Confidence 468999999999999999999999999999999999999986431 111111111 11 1111222222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
.++.+++.+||+.||++|||+.||++.
T Consensus 245 ---~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 245 ---KPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ---HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ---HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 246678889999999999999999864
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.3e-34 Score=336.90 Aligned_cols=242 Identities=21% Similarity=0.293 Sum_probs=186.7
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-------------ccccchHHHHHHHHhhcCCCceeEEeeEEe
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-------------ITTSSFWPDVSQFGKLIMHPNIVRLHGVCR 751 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-------------~~~~~~~~e~~~~~~~~~H~niv~l~g~~~ 751 (966)
+.....+|+|++|.||+|+...++..||||++..... ...+.+.+|+..+.+ ++|||||+++++|.
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~ 116 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS-LDHPNIIKLFDVFE 116 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHT-CCCTTBCCEEEEEE
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEE
Confidence 3455678999999999999988899999999865321 112356778887777 69999999999999
Q ss_pred cCCeeEEEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC-ceEEEecc
Q 002105 752 SEKAAYLVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE-PHLRLSVP 827 (966)
Q Consensus 752 ~~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~-~~~~~~~~ 827 (966)
+++..|+|||||++|+|.+++. .+++..+..++.||+.||+||| +.+|+||||||+||+++.+.. ..++++||
T Consensus 117 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 117 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 9999999999999999999885 4899999999999999999999 458999999999999987643 46899999
Q ss_pred ccceecC-----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccc
Q 002105 828 GLAYCTD-----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDT 902 (966)
Q Consensus 828 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (966)
|++.... ....||+.|+|||++. ..++.++||||+||++|||++|+.||.+.. ...+...+.. . ...
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~---~-~~~- 265 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN--DQDIIKKVEK---G-KYY- 265 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH---C-CCC-
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHc---C-CCC-
Confidence 9986532 3356899999999987 468999999999999999999999997542 1111121111 1 000
Q ss_pred cccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 903 WVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 903 ~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.+.......+ .++.+++.+|++.||.+|||++|+++
T Consensus 266 -~~~~~~~~~s------~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 266 -FDFNDWKNIS------DEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -CCHHHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCccccCCCC------HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1100011111 24667888999999999999999974
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1e-33 Score=321.82 Aligned_cols=193 Identities=21% Similarity=0.230 Sum_probs=161.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCC-----ceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHP-----NIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~-----niv~l~g~~~~~~~~~lv 759 (966)
+.....+|+|++|.||+|+...++..||||++.... ....++..|+..+..+-+|+ +||++++++..++..++|
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 134 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLV 134 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEE
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEE
Confidence 344556799999999999998889999999985322 22334556666665533355 499999999999999999
Q ss_pred EEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 760 YEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|||++ |+|.++++. +++..+..++.|++.||+|||.+ ..+||||||||+|||++.+....++++|||.+....
T Consensus 135 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 135 FEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp EECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 99997 599999863 78999999999999999999964 568999999999999976566678999999986533
Q ss_pred ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.
T Consensus 213 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 213 QRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3457899999999999999999999999999999999999999764
No 229
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.7e-34 Score=329.02 Aligned_cols=191 Identities=19% Similarity=0.227 Sum_probs=161.7
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhh-----cCCCceeEEeeEEecCCeeEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKL-----IMHPNIVRLHGVCRSEKAAYLV 759 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~-----~~H~niv~l~g~~~~~~~~~lv 759 (966)
+.....+|+|+||.||+|+...++..||||++... ....+.+..|+..+.++ ..|||||++++++...+..++|
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 34456679999999999999888999999988542 22233456666655552 2678999999999999999999
Q ss_pred EEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 760 YEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|||++ |+|.+++.. ++|..+..++.||+.||+|||. .+||||||||+|||++.+....++++|||++....
T Consensus 178 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp ECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99997 699998852 8999999999999999999995 48999999999999998777668999999986532
Q ss_pred ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 3357899999999999999999999999999999999999999764
No 230
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.9e-34 Score=310.91 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=185.3
Q ss_pred ccccCCCCCccEEEEEEEecC---CcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 687 NLTSRGKKGVSSSYKVRSLAN---DMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~---~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
....+|+|++|.||+|+.... +..||+|.+..... ...+.+.+|+..+.+ ++||||+++++++.+ +..++||||
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~-~~~~~v~e~ 93 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN-LDHPHIVKLIGIIEE-EPTWIIMEL 93 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHH-HCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHh-CCCCCcceEEEEEcC-CCCEEEEec
Confidence 344568899999999987533 23589998764422 234567788888877 699999999999875 456899999
Q ss_pred cCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 763 IEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 763 ~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
+++|+|.++++. +++..+..++.|+++||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETT--EEEECCCCGGGCC-----
T ss_pred CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCC--cEEeCccCCCcccccccc
Confidence 999999999953 899999999999999999999 45899999999999998654 67899999876422
Q ss_pred ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
....+++.|+|||.+.+..++.++|||||||++|||+| |+.||..... ....+.... .... ....
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~---~~~~------~~~~ 237 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEK---GDRL------PKPD 237 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHH---TCCC------CCCT
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhc---CCCC------CCCC
Confidence 22346778999999988899999999999999999999 9999864321 112122211 1000 0111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
..+ .++.+++.+|++.||++|||+.|+++.|+++..
T Consensus 238 ~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 238 LCP------PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC------HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 111 246678889999999999999999999998543
No 231
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.3e-34 Score=341.65 Aligned_cols=333 Identities=21% Similarity=0.205 Sum_probs=211.6
Q ss_pred CCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceec
Q 002105 227 LTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILH 306 (966)
Q Consensus 227 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 306 (966)
+.+++.|++++|.+....+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34455555555555543333444555555555555555544444555555555555555555544444445555555555
Q ss_pred ccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCC
Q 002105 307 LFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEG 386 (966)
Q Consensus 307 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~ 386 (966)
|++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|+.|+|+ +|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~------------------------~N~l~~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS------------------------SNRLTH 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECT------------------------TSCCSB
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECc------------------------CCCCCC
Confidence 55555544333334445555555555555544444444444445555554 444443
Q ss_pred CCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCc
Q 002105 387 KIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGS 466 (966)
Q Consensus 387 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 466 (966)
.. +..+++|+.|++++|.+++. ...+.|+.|++++|.++...+.. .++|+.|+|++|.+++. +.+..+
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~-~~l~~l 253 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT-AWLLNY 253 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC-GGGGGC
T ss_pred cC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC-hhhccC
Confidence 31 34455666666666666542 23456777777777776543322 25788888888888763 345567
Q ss_pred ccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeC
Q 002105 467 DQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDL 546 (966)
Q Consensus 467 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdL 546 (966)
++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..++.+++|+.|+|
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 331 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEEC
Confidence 788888888888888888888899999999999999886 5777778889999999999998 57777888899999999
Q ss_pred CCCcCcccCCcccccCCCCCeeeCcCCcccccCCCCCccCCCccccccCC-CCCCC
Q 002105 547 SENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPSTGAFLAINATAVAGN-DLCGG 601 (966)
Q Consensus 547 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~gn-~lcg~ 601 (966)
++|++++.. +..++.|+.|++++|+++|..+ ...+..+....+.++ ..|+.
T Consensus 332 ~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 332 DHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCCcC---hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccccCCc
Confidence 999998653 5677889999999999987643 223444445555666 66765
No 232
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.6e-34 Score=318.60 Aligned_cols=236 Identities=20% Similarity=0.305 Sum_probs=187.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+++...++..||+|.+..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus 44 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~ 122 (335)
T 2owb_A 44 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS-LAHQHVVGFHGFFEDNDFVFVVLEL 122 (335)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCeEEEEEec
Confidence 344557899999999999988899999998865422 223456777777776 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----- 834 (966)
+++++|.+++. .+++.++..++.|+++||+|||. .+|+||||||+||+++.+. .+++.|||.+....
T Consensus 123 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~~~ 197 (335)
T 2owb_A 123 CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGER 197 (335)
T ss_dssp CTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTC--CEEECCCTTCEECCSTTCC
T ss_pred CCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCC--CEEEeeccCceecccCccc
Confidence 99999999886 38999999999999999999994 5899999999999999654 47899999986432
Q ss_pred -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....... ... .+....+
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~---~~~--------~~~~~~~ 265 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-KETYLRIKK---NEY--------SIPKHIN 265 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHH---TCC--------CCCTTSC
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-HHHHHHHhc---CCC--------CCCccCC
Confidence 234689999999999998999999999999999999999999975321 111111111 010 1111121
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+||+.||++|||++|+++
T Consensus 266 ------~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 266 ------PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ------HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 24566788999999999999999986
No 233
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.4e-34 Score=337.76 Aligned_cols=241 Identities=21% Similarity=0.285 Sum_probs=188.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc---ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT---ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~---~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus 29 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~ 107 (484)
T 3nyv_A 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ-LDHPNIMKLYEFFEDKGYFYLVGEV 107 (484)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHh-CCCCCCCcEEEEEEeCCEEEEEEec
Confidence 345567899999999999988999999999865432 233457788888777 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-CCceEEEeccccceecCCC--
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK-DEPHLRLSVPGLAYCTDSK-- 836 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~-~~~~~~~~~~~~~~~~~~~-- 836 (966)
+++|+|.+++. .+++..+..++.||+.||+|||. .+|+||||||+||+++.. ....++++|||++......
T Consensus 108 ~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp CCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 99999999985 48999999999999999999994 589999999999999642 3457899999988643222
Q ss_pred ---CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 837 ---SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 837 ---~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
..||+.|+|||++.+ .++.++||||+||++|||+||+.||.+.. ..+.. ..+.. . .... ..|.. ...+
T Consensus 185 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~-~~i~~---~-~~~~-~~~~~-~~~s 255 (484)
T 3nyv_A 185 MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-EYDIL-KKVEK---G-KYTF-ELPQW-KKVS 255 (484)
T ss_dssp HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHH-HHHHH---C-CCCC-CSGGG-GGSC
T ss_pred cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-HHHHH-HHHHc---C-CCCC-CCccc-ccCC
Confidence 368999999999876 68999999999999999999999997542 11211 22211 1 1000 00110 1111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 256 ------~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 256 ------ESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------HHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 24667888999999999999999984
No 234
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-34 Score=320.36 Aligned_cols=243 Identities=22% Similarity=0.282 Sum_probs=185.6
Q ss_pred ccccccCCCCCccEEEEEEEe---cCCcEEEEEEEeccC----cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 685 EENLTSRGKKGVSSSYKVRSL---ANDMQFVVKKIIDVN----TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~---~~~~~vavk~~~~~~----~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
+.....+|+|+||.||+++.. .++..||||++.... ....+.+.+|+..+.++-.|||||++++++..++..+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 345556799999999999984 478999999985432 2234557788888877447999999999999999999
Q ss_pred EEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-
Q 002105 758 LVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT- 833 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~- 833 (966)
+||||+++|+|.+++. .+++.....++.||++||+||| +.+|+||||||+||+++.+. .++++|||++...
T Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCC--cEEEeeCCCCeecc
Confidence 9999999999999996 3899999999999999999999 45899999999999998654 5789999987642
Q ss_pred ------CCCCcCCcccccccccCC--CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc
Q 002105 834 ------DSKSINSSAYVAPETKES--KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD 905 (966)
Q Consensus 834 ------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 905 (966)
.....||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ...+..+..... .
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~-------~ 282 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS-------E 282 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHC-------C
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhcc-------C
Confidence 123468999999999885 457899999999999999999999997542221 111222221111 1
Q ss_pred ccccCCCcchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002105 906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARP-----CASDVTKT 946 (966)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~~~ 946 (966)
+......+ ..+.+++.+|++.||++|| +++|+++.
T Consensus 283 ~~~~~~~~------~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 PPYPQEMS------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCCTTSC------HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCCcccC------HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11111122 2456788899999999999 88888753
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.3e-34 Score=320.96 Aligned_cols=237 Identities=21% Similarity=0.271 Sum_probs=163.9
Q ss_pred CCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEccCCC
Q 002105 691 RGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEYIEGK 766 (966)
Q Consensus 691 ~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey~~~g 766 (966)
+|+|++|.||+|+...+|..||||++... .....|+....+.+.||||+++++++.. ++..++||||+++|
T Consensus 37 lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg 111 (336)
T 3fhr_A 37 LGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG 111 (336)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred eeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence 68999999999999889999999998542 2345566665666899999999999976 45689999999999
Q ss_pred CHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecC----CC
Q 002105 767 ELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTD----SK 836 (966)
Q Consensus 767 ~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~----~~ 836 (966)
+|.+++. .+++.++..++.|++.||+||| ..+|+||||||+||+++.+. ...++++|||.+.... ..
T Consensus 112 ~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 188 (336)
T 3fhr_A 112 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT 188 (336)
T ss_dssp EHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------
T ss_pred CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceecccccccc
Confidence 9999996 3889999999999999999999 45899999999999998643 4568999999986532 23
Q ss_pred CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105 837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ 916 (966)
Q Consensus 837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 916 (966)
..+|+.|+|||++.+..++.++|||||||++|||+||+.||........ ...... ....... ....+. ....+
T Consensus 189 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~-~~~~~--- 261 (336)
T 3fhr_A 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI-SPGMKR-RIRLGQY-GFPNPE-WSEVS--- 261 (336)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------CCCTTT-STTCC---
T ss_pred CCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh-hhhHHH-hhhcccc-ccCchh-hccCC---
Confidence 4678999999999988999999999999999999999999865422110 000000 0000000 000110 01111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 917 NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||++|+++
T Consensus 262 ---~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 262 ---EDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 24667888999999999999999986
No 236
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.2e-33 Score=326.18 Aligned_cols=249 Identities=13% Similarity=0.151 Sum_probs=191.8
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
.....+|+|+||.||+|+...++..||||.+.... ...++..|+..+.++-.|++|+.+..++..++..++||||+ +
T Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g 86 (483)
T 3sv0_A 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-G 86 (483)
T ss_dssp ECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-C
Confidence 34556799999999999998899999999765433 23567888888877534477777777888889999999999 9
Q ss_pred CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecC------
Q 002105 766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~------ 834 (966)
|+|.++++ .++|..+..++.||+.||+|||. .+||||||||+|||++. +....++++|||++....
T Consensus 87 ~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 87 PSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 99999996 48999999999999999999994 58999999999999942 133568899999986421
Q ss_pred -------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc--hhhHHHHHHHhhccCccccccc
Q 002105 835 -------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV--HESIVEWARYCYSDCHLDTWVD 905 (966)
Q Consensus 835 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d 905 (966)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+..+...... .. ++
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~----~~ 238 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TS----IE 238 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SC----HH
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-cc----HH
Confidence 1346899999999999999999999999999999999999999764322 1112111111110 00 00
Q ss_pred ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
. +...++ .++.+++..||+.+|++||++.+|+++|++++.
T Consensus 239 ~-l~~~~p------~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 A-LCRGYP------TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp H-HHTTSC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred H-HhcCCc------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0 111111 356778889999999999999999999998654
No 237
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=311.32 Aligned_cols=238 Identities=19% Similarity=0.304 Sum_probs=185.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
+.....+|+|++|.||+|+...+|..||+|++.... ..+.+.+|+..+.+ ++||||+++++++..++..++||||++
T Consensus 31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~ 107 (314)
T 3com_A 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQ-CDSPHVVKYYGSYFKNTDLWIVMEYCG 107 (314)
T ss_dssp EEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHh-CCCCCCccEEEEEEeCCEEEEEeecCC
Confidence 345566899999999999998889999999986532 34567888888877 699999999999999999999999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------ 834 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------ 834 (966)
+|+|.++++ .+++..+..++.+++.||+||| ..+|+||||||+||+++.+. .+++.|||.+....
T Consensus 108 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 108 AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC--CEEECCCTTCEECBTTBSCB
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCC--CEEEeecccchhhhhhcccc
Confidence 999999986 4899999999999999999999 45899999999999998654 57899999875422
Q ss_pred CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
....|++.|+|||.+.+..++.++|||||||++|||+||+.||..... .... .... .. ....+..+ ..++
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~-~~~~---~~-~~~~~~~~---~~~~- 252 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-MRAI-FMIP---TN-PPPTFRKP---ELWS- 252 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-HHHH-HHHH---HS-CCCCCSSG---GGSC-
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-HHHH-HHHh---cC-CCcccCCc---ccCC-
Confidence 234688999999999999999999999999999999999999864321 1111 1111 11 00000001 1111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 253 -----~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 253 -----DNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 24667888999999999999999975
No 238
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4e-34 Score=318.63 Aligned_cols=254 Identities=19% Similarity=0.324 Sum_probs=186.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
+.....+|+|++|.||+|+...+|..||||++...... ..+.+.+|+..+.+ ++|||||+++++|.+++..++||||
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ-LRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhh-CCCCCEeeEEEEeecCCEEEEEEec
Confidence 34555678999999999999888999999998654322 12346677777777 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------ 833 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------ 833 (966)
+++++|.+++. .+++..+..++.|++.||+||| ..+|+||||||+||+++.+. .++++|||.+...
T Consensus 106 ~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 106 VDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp CSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEECCCTTC---------
T ss_pred CCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCC--cEEEEeCCCceeecCCccc
Confidence 99999998874 4899999999999999999999 45899999999999998654 5789999987542
Q ss_pred CCCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHh----------hc-cCccc
Q 002105 834 DSKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYC----------YS-DCHLD 901 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----------~~-~~~~~ 901 (966)
.....+|+.|+|||++.+. .++.++|||||||++|||+||+.||...... +......... +. .....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 1234689999999998775 7899999999999999999999999764321 1111111100 00 00000
Q ss_pred ccccccccCCCcch---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 902 TWVDPFIRGHVSSI---QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 902 ~~~d~~~~~~~~~~---~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.+..|.+....... .....++.+++.+|++.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00111111100000 011235778889999999999999999874
No 239
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.9e-34 Score=322.67 Aligned_cols=190 Identities=20% Similarity=0.350 Sum_probs=161.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+++...++..||+|++.... ....+.+.+|+..+.+ ++|||||++++++..++..++||||++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~ 114 (360)
T 3eqc_A 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMD 114 (360)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGG-CCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHH-CCCCCEEEEeEEEEECCEEEEEEECCC
Confidence 44556789999999999998899999999886542 2223456777777777 699999999999999999999999999
Q ss_pred CCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee----cCCCC
Q 002105 765 GKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC----TDSKS 837 (966)
Q Consensus 765 ~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~----~~~~~ 837 (966)
+|+|.++++ .+++.....++.+++.||+|||+. .+|+||||||+||+++.+. .++++|||.+.. .....
T Consensus 115 ~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTC--CEEECCCCCCHHHHHHC----
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCC--CEEEEECCCCcccccccccCC
Confidence 999999996 489999999999999999999952 2799999999999999764 478999998743 23345
Q ss_pred cCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 838 INSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 838 ~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
.||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 7899999999999999999999999999999999999999753
No 240
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.3e-35 Score=326.64 Aligned_cols=248 Identities=16% Similarity=0.253 Sum_probs=187.7
Q ss_pred cccccCCCCCccEEEEEEE----ecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEec--CCeeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRS----LANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS--EKAAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~----~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~--~~~~~l 758 (966)
.....+|+|++|.||++.. ..++..||||++..... ...+.+.+|+..+.+ ++|||||++++++.+ ....++
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT-LYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTTTEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHh-CCCcchhhEEEEEecCCCceEEE
Confidence 3455679999999987753 34788999999865422 223457788888877 699999999999987 467899
Q ss_pred EEEccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 759 VYEYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
||||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCC--CEEECCcccccccccc
Confidence 9999999999999974 899999999999999999999 45899999999999998654 57899999886532
Q ss_pred -------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch----------hhHHHHHHHhhcc
Q 002105 835 -------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVH----------ESIVEWARYCYSD 897 (966)
Q Consensus 835 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~----------~~~~~~~~~~~~~ 897 (966)
....+|+.|+|||++.+..++.++|||||||++|||+||+.||....... ....+... ....
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE-LLER 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH-HHHT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH-HHhc
Confidence 22356778999999998889999999999999999999999986421100 00000111 0111
Q ss_pred CcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 898 CHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 898 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
.. .+.....++ .++.+++.+||+.||++|||++|+++.|+++.
T Consensus 267 ~~-----~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 267 GE-----RLPRPDKCP------AEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp TC-----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc-----CCCCCcccc------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 00 001111121 35677888999999999999999999999843
No 241
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2e-33 Score=316.97 Aligned_cols=241 Identities=21% Similarity=0.293 Sum_probs=185.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc--------ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT--------TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~--------~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~ 757 (966)
.....+|+|++|.||+|+...+|..||||.+....... .+.+.+|+..+.++.+||||+++++++...+..|
T Consensus 97 ~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 176 (365)
T 2y7j_A 97 DPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF 176 (365)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEE
T ss_pred ccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEE
Confidence 33456788999999999997789999999886543211 2345677777777448999999999999999999
Q ss_pred EEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 758 LVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
+||||+++|+|.+++. .+++..+..++.||+.||+|||. .+|+||||||+||+++.++ .+++.|||++....
T Consensus 177 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~--~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 177 LVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNM--QIRLSDFGFSCHLE 251 (365)
T ss_dssp EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC--CEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC--CEEEEecCcccccC
Confidence 9999999999999986 48999999999999999999994 5899999999999999654 57899999876432
Q ss_pred -----CCCcCCcccccccccC------CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc
Q 002105 835 -----SKSINSSAYVAPETKE------SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW 903 (966)
Q Consensus 835 -----~~~~~~~~y~aPE~~~------~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (966)
....||+.|+|||++. ...++.++|||||||++|||+||+.||.... .......+. .. ... .
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~~i~---~~-~~~-~ 324 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR--QILMLRMIM---EG-QYQ-F 324 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HT-CCC-C
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC--HHHHHHHHH---hC-CCC-C
Confidence 2357899999999875 3368899999999999999999999986531 111111111 11 000 0
Q ss_pred ccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 904 VDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 904 ~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..|.. ... ..++.+++.+|++.||++|||+.|+++
T Consensus 325 ~~~~~-~~~------~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 325 SSPEW-DDR------SSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CHHHH-SSS------CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCccc-ccC------CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01100 111 124667888999999999999999875
No 242
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1e-34 Score=328.66 Aligned_cols=245 Identities=12% Similarity=0.073 Sum_probs=168.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc---cccchHHHHHHHHhhc-CCCceeEEe-------eEEecC-
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI---TTSSFWPDVSQFGKLI-MHPNIVRLH-------GVCRSE- 753 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~---~~~~~~~e~~~~~~~~-~H~niv~l~-------g~~~~~- 753 (966)
.....+|+|++|.||+|++..+|..||||++...... ..+.+.+|+..+..+- +|||||+++ +++..+
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 4455679999999999999889999999999764321 2233455543333321 599988865 444433
Q ss_pred ----------------CeeEEEEEccCCCCHHHHHHc----CCHHHH------HHHHHHHHHHHHHHhhcCCCCeEeecC
Q 002105 754 ----------------KAAYLVYEYIEGKELSEVLRN----LSWERR------RKVAIGIAKALRFLHFHCSPSVVAGDV 807 (966)
Q Consensus 754 ----------------~~~~lv~Ey~~~g~L~~~l~~----l~~~~~------~~i~~~ia~~l~yLH~~~~~~iiHrDl 807 (966)
...|+|||||+ |+|.++++. +.+..+ ..++.||++||+||| +.+||||||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHrDi 220 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHF 220 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccCcC
Confidence 33799999999 899999963 566667 788899999999999 458999999
Q ss_pred CCCcEEEcCCCCceEEEeccccceecCC---CCcCCcccccccccCC--CCCCCcchHHHHHHHHHHHHcCCCCCCCCCC
Q 002105 808 SPGKVIVDGKDEPHLRLSVPGLAYCTDS---KSINSSAYVAPETKES--KDITEKGDIYGFGLILIDLLTGKSPADADFG 882 (966)
Q Consensus 808 k~~Nill~~~~~~~~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~ 882 (966)
||+|||++.+. .++++|||++..... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.....
T Consensus 221 kp~NIll~~~~--~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 221 TPDNLFIMPDG--RLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp SGGGEEECTTS--CEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred CHHHEEECCCC--CEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 99999999754 579999999875432 3457799999999987 7799999999999999999999999976422
Q ss_pred chhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 883 VHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.... .|............+..|.. ... . .++.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~--~~~~~~~~~~~~~~~~~~~~-~~~---~---~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKG--SWKRPSLRVPGTDSLAFGSC-TPL---P---DFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTT--CCCBCCTTSCCCCSCCCTTS-SCC---C---HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccc--chhhhhhhhccccccchhhc-cCC---C---HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1100 00000000000000001100 111 1 25667788999999999999999863
No 243
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-33 Score=324.70 Aligned_cols=248 Identities=22% Similarity=0.248 Sum_probs=181.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecC------CeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE------KAAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~------~~~~l 758 (966)
+.....+|+|+||.||+|+...+|..||||++.... ..+.+|+..+.+ ++|||||+++++|... ...++
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~-l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRK-LDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHT-CCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHH-cCCCCccceeeEEeccCCCCcceeEEe
Confidence 344556799999999999998889999999986432 234467777766 7999999999998542 23679
Q ss_pred EEEccCCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105 759 VYEYIEGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY 831 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~ 831 (966)
||||+++ ++.+.++ .+++.....++.||++||+||| +.+|+||||||+|||++.+. ..++++|||++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~-~~~kl~DFG~a~ 205 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDT-AVLKLCDFGSAK 205 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTT-TEEEECCCTTCE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCC-CeEEeccchhhh
Confidence 9999995 6666553 3899999999999999999999 56999999999999998543 457999999986
Q ss_pred ecC-----CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhc---------
Q 002105 832 CTD-----SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYS--------- 896 (966)
Q Consensus 832 ~~~-----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 896 (966)
... ....+|+.|+|||++.+. .|+.++|||||||++|||++|+.||.+... .+.+.+.....-.
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHHHH
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhh
Confidence 532 234689999999998764 799999999999999999999999976532 2222222221000
Q ss_pred cCcccccccccccCCCcchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 897 DCHLDTWVDPFIRGHVSSIQ-----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 897 ~~~~~~~~d~~~~~~~~~~~-----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
......+..|.+... .+. ....++.+++.+|++.||++|||+.|+++
T Consensus 285 ~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAH--PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CSCCCCCCCCCCCCC--CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccCccCCC--CHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000111111111110 000 01135778889999999999999999874
No 244
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-34 Score=334.57 Aligned_cols=182 Identities=19% Similarity=0.312 Sum_probs=142.6
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEec-----CCeeE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS-----EKAAY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~-----~~~~~ 757 (966)
+.....+|+|+||.||+|++..++..||||++.... ....+.+.+|+..+.+ ++|||||++++++.. .+..|
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNR-LNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHH-CCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHh-CCCCCCCceEEEEecCCcccCceEE
Confidence 345566899999999999998899999999986532 2233557788888877 699999999999954 35789
Q ss_pred EEEEccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 758 LVYEYIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
+||||++ |+|.++++. +++.....++.||+.||+||| +.+||||||||+|||++.+. .++++|||++....
T Consensus 134 lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~--~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 134 VVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDC--SVKVCDFGLARTVD 207 (458)
T ss_dssp EEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTC--CEEECCCTTCBCTT
T ss_pred EEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCC--CEeecccccchhcc
Confidence 9999986 799999874 899999999999999999999 45899999999999999764 57999999986422
Q ss_pred ---------------------------------CCCcCCccccccccc-CCCCCCCcchHHHHHHHHHHHHcC
Q 002105 835 ---------------------------------SKSINSSAYVAPETK-ESKDITEKGDIYGFGLILIDLLTG 873 (966)
Q Consensus 835 ---------------------------------~~~~~~~~y~aPE~~-~~~~~~~~~Dv~S~Gv~l~el~tg 873 (966)
...+||+.|+|||++ ....|+.++|||||||++|||+||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 223679999999976 566799999999999999999993
No 245
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-34 Score=318.87 Aligned_cols=252 Identities=19% Similarity=0.260 Sum_probs=184.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-----ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-----ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY 760 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-----~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~ 760 (966)
.....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++..++..++||
T Consensus 13 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~ 91 (346)
T 1ua2_A 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE-LSHPNIIGLLDAFGHKSNISLVF 91 (346)
T ss_dssp CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHH-CCCTTBCCEEEEECCTTCCEEEE
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhh-CCCCCCCeEEEEEeeCCceEEEE
Confidence 444567899999999999988899999998854321 113457788888877 69999999999999999999999
Q ss_pred EccCCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 761 EYIEGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 761 Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
||+++ +|.+++.. +++..+..++.|+++||+|||. .+|+||||||+||+++.++ .++++|||++....
T Consensus 92 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 92 DFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSP 165 (346)
T ss_dssp ECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTSC
T ss_pred EcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCC--CEEEEecccceeccCC
Confidence 99996 89988863 7889999999999999999994 5899999999999998754 57899999886421
Q ss_pred ----CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc--
Q 002105 835 ----SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF-- 907 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-- 907 (966)
....+|+.|+|||++.+. .++.++|||||||++|||++|++||.+... .+.+...... ........|.+..
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~-~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFET-LGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHH-HCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHH-cCCCChhhhhhhccC
Confidence 234689999999998654 589999999999999999999999876422 2222121111 1111111111100
Q ss_pred ---c-cCCCcc-h-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 908 ---I-RGHVSS-I-----QNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 908 ---~-~~~~~~-~-----~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
+ ....+. . .....++.+++.+|++.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000000 0 0111356778889999999999999999864
No 246
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-33 Score=320.73 Aligned_cols=247 Identities=18% Similarity=0.233 Sum_probs=179.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec------------
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------------ 752 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------------ 752 (966)
+.....+|+|++|.||+|+...+|..||||++.... ....+|+..+.+ ++|||||++++++..
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKV-LDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTT-CCCTTBCCEEEEEEEC-----------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHH-cCCCCccchhheeeecCcccccccccc
Confidence 344556799999999999998999999999986432 233467777766 799999999999844
Q ss_pred --------------------------CCeeEEEEEccCCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCC
Q 002105 753 --------------------------EKAAYLVYEYIEGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCS 799 (966)
Q Consensus 753 --------------------------~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~ 799 (966)
+...++||||++ |+|.+.++ .+++.....++.|+++||+||| +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~ 159 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---S 159 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 334889999999 58877774 3899999999999999999999 5
Q ss_pred CCeEeecCCCCcEEEcCCCCceEEEeccccceec-----CCCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcC
Q 002105 800 PSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-----DSKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTG 873 (966)
Q Consensus 800 ~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg 873 (966)
.+|+||||||+||+++.+ ...++++|||.+... .....+|+.|+|||.+.+. .++.++||||+||++|||++|
T Consensus 160 ~gi~H~Dikp~Nil~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSK-DNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp TTEECSCCCGGGEEEETT-TTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred CcCccCccCHHHEEEcCC-CCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 699999999999999742 346899999998642 2234678999999988765 489999999999999999999
Q ss_pred CCCCCCCCCchhhHHHHHHHhhc---------cCcccccccccccCCCcchH-----HHHHHHHHHHHHccCCCCCCCCC
Q 002105 874 KSPADADFGVHESIVEWARYCYS---------DCHLDTWVDPFIRGHVSSIQ-----NEIVEIMNLALHCTAGDPTARPC 939 (966)
Q Consensus 874 ~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~-----~~~~~~~~l~~~C~~~~P~~RPt 939 (966)
+.||.+... .+.+.+.+...-. ........-|..... .+. ....++.+++.+|++.||++|||
T Consensus 239 ~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (383)
T 3eb0_A 239 KPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAK--DWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315 (383)
T ss_dssp SCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCC--CHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred CCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcc--cHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 999976432 2222122211000 000000000100000 000 01134678889999999999999
Q ss_pred HHHHH
Q 002105 940 ASDVT 944 (966)
Q Consensus 940 ~~~v~ 944 (966)
+.|++
T Consensus 316 ~~e~l 320 (383)
T 3eb0_A 316 PYEAM 320 (383)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99997
No 247
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-33 Score=317.78 Aligned_cols=250 Identities=19% Similarity=0.279 Sum_probs=180.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCC------ee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK------AA 756 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~------~~ 756 (966)
+.....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++..++ ..
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH-MRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHH-CCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHh-CCCcCCCCceeeEecCCccccCceE
Confidence 3455668999999999999988999999999854321 223456788887777 69999999999998753 46
Q ss_pred EEEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 757 YLVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|+||||+ +++|.++++ .+++.....++.||++||+||| +.+|+||||||+||+++.+. .++++|||++....
T Consensus 106 ~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQAD 179 (367)
T ss_dssp EEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEECC
T ss_pred EEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCC--CEEEEeeecccccc
Confidence 9999999 789999986 4899999999999999999999 45899999999999999754 57899999987543
Q ss_pred ---CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhcc-------C-----
Q 002105 835 ---SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSD-------C----- 898 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~----- 898 (966)
....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... .+.+.......... .
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~ 258 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFVQRLQSDEA 258 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhhHHH
Confidence 33578999999998876 6799999999999999999999999976422 11111111100000 0
Q ss_pred -----cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 899 -----HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 899 -----~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..............+. ...++.+++.+|++.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 259 KNYMKGLPELEKKDFASILTN---ASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHSCCCCCCCGGGTCTT---CCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCHHHHCCC---CCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000000000011 1135667888999999999999999876
No 248
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-33 Score=304.97 Aligned_cols=236 Identities=21% Similarity=0.286 Sum_probs=179.6
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
....+|+|++|.||+|+...+|..||||++.... ....+.+.+|+..+.+ ++||||+++++++..++..++||||+
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL-FRHPHIIKLYQVISTPTDFFMVMEYV 93 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhc-CCCCCEeEEEEEEecCCeEEEEEecc
Confidence 3445688999999999998899999999986432 1223456778777777 79999999999999999999999999
Q ss_pred CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----C
Q 002105 764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-----S 835 (966)
Q Consensus 764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-----~ 835 (966)
++++|.+++. .+++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+.... .
T Consensus 94 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~~~ 168 (276)
T 2h6d_A 94 SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLR 168 (276)
T ss_dssp CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTS--CEEECCCCGGGCCCC-----
T ss_pred CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCC--CEEEeecccccccCCCccee
Confidence 9999999986 48999999999999999999995 4899999999999998654 57899999876432 2
Q ss_pred CCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105 836 KSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS 914 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 914 (966)
...+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.... .....+.... . . +.+....+
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~---~-~------~~~~~~~~- 235 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--VPTLFKKIRG---G-V------FYIPEYLN- 235 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH---C-C------CCCCTTSC-
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhc---C-c------ccCchhcC-
Confidence 3467899999999988765 689999999999999999999987531 1111121111 0 0 00111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 915 IQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
.++.+++.+|++.||++|||++||++.
T Consensus 236 -----~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 236 -----RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 246678889999999999999999863
No 249
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-33 Score=318.28 Aligned_cols=311 Identities=22% Similarity=0.211 Sum_probs=197.6
Q ss_pred CCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceec
Q 002105 227 LTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILH 306 (966)
Q Consensus 227 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 306 (966)
+++++.|++++|.++...+..|.++++|++|++++|.+++..+..|..+++|++|++++|.+++..|..+..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666666666543333455666666666666666555555566666666666666666655555555666666666
Q ss_pred ccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCC
Q 002105 307 LFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEG 386 (966)
Q Consensus 307 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~ 386 (966)
+++|.++...+..|.++++|++|++++|.+++..|..+..+++|+.|++++|.+++.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------------- 180 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----------------------- 180 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-----------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-----------------------
Confidence 666666543333445566666666666666555555555555555555555555532
Q ss_pred CCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCc
Q 002105 387 KIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGS 466 (966)
Q Consensus 387 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 466 (966)
.+..+++|+.|++++|.+++. ...+.|+.|++++|.+...... ..++|+.|++++|.+++. +.+..+
T Consensus 181 ----~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~-~~l~~l 247 (390)
T 3o6n_A 181 ----DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT-AWLLNY 247 (390)
T ss_dssp ----CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC-GGGGGC
T ss_pred ----ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc-HHHcCC
Confidence 133445555555555555432 2234566666666666544221 235677777777777653 334456
Q ss_pred ccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeC
Q 002105 467 DQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDL 546 (966)
Q Consensus 467 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdL 546 (966)
++|++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 777777777787777777778888888888888888765 5666677788888888888887 45666777788888888
Q ss_pred CCCcCcccCCcccccCCCCCeeeCcCCccccc
Q 002105 547 SENQLSGKIPQTLGRVASLVQVNISHNHFHGS 578 (966)
Q Consensus 547 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ 578 (966)
++|+++.. | +..+++|+.|++++|++.+.
T Consensus 326 ~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 326 DHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 88888754 2 56677888888888888764
No 250
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8e-34 Score=327.76 Aligned_cols=235 Identities=21% Similarity=0.289 Sum_probs=175.6
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCHH
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKELS 769 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~ 769 (966)
.+|+|++|.||++.. .+|..||||++.... .+.+.+|+..+.++.+|||||++++++.+++..|+|||||+ |+|.
T Consensus 22 ~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 22 ILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEECSTTCEEEEEE-SSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred eEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 468888898987654 789999999986432 23467888888775689999999999999999999999996 6999
Q ss_pred HHHHcC----------CHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-----------CCceEEEeccc
Q 002105 770 EVLRNL----------SWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK-----------DEPHLRLSVPG 828 (966)
Q Consensus 770 ~~l~~l----------~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~-----------~~~~~~~~~~~ 828 (966)
++++.. ++..+..++.||+.||+||| +.+|+||||||+|||++.+ ....++++|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 999642 22234679999999999999 4589999999999999753 34578999999
Q ss_pred cceecCC----------CCcCCcccccccccCC-------CCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002105 829 LAYCTDS----------KSINSSAYVAPETKES-------KDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEW 890 (966)
Q Consensus 829 ~~~~~~~----------~~~~~~~y~aPE~~~~-------~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~ 890 (966)
++..... ...||++|+|||++.+ ..++.++|||||||++|||+| |+.||........ ..
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~i 250 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---NI 250 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH---HH
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH---HH
Confidence 9865321 2368999999999865 678999999999999999999 9999865432211 11
Q ss_pred HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...... ... ... . .......++.+++.+|++.||++|||+.||++
T Consensus 251 ~~~~~~---~~~-----~~~-~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 IRGIFS---LDE-----MKC-L-HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHTCCC---CCC-----CTT-C-CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hcCCCC---ccc-----ccc-c-ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111111 000 000 0 01233456778889999999999999999974
No 251
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=323.38 Aligned_cols=184 Identities=21% Similarity=0.394 Sum_probs=145.4
Q ss_pred cCCCCCccEEEEEEEe--cCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEe--cCCeeEEEEEccCC
Q 002105 690 SRGKKGVSSSYKVRSL--ANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCR--SEKAAYLVYEYIEG 765 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~--~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~--~~~~~~lv~Ey~~~ 765 (966)
.+|+|+||.||+|+.. .++..||||++... .....+.+|+..+.+ ++|||||++++++. .+...|+||||++
T Consensus 28 ~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRE-LKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp CCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHH-CCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred EeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHh-cCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 4799999999999964 46789999987533 223457788888877 69999999999995 4678999999998
Q ss_pred CCHHHHHH------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC--CCCceEEEeccccce
Q 002105 766 KELSEVLR------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG--KDEPHLRLSVPGLAY 831 (966)
Q Consensus 766 g~L~~~l~------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~--~~~~~~~~~~~~~~~ 831 (966)
|+|.+++. .+++..+..++.||+.||+|||. .+|+||||||+|||++. +....++++|||++.
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 58888774 28999999999999999999994 58999999999999943 234578999999986
Q ss_pred ecC---------CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105 832 CTD---------SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADAD 880 (966)
Q Consensus 832 ~~~---------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~ 880 (966)
... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 422 23468999999999877 45899999999999999999999999754
No 252
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.9e-34 Score=309.23 Aligned_cols=242 Identities=18% Similarity=0.230 Sum_probs=178.9
Q ss_pred ccccccCCCCCccEEEEEEEec-CCc--EEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLA-NDM--QFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~-~~~--~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l 758 (966)
+.....+|+|++|.||+|+... ++. .||||++.... ....+.+.+|+..+.+ ++|||||++++++..++ .++
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~-~~~ 97 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLIRLYGVVLTPP-MKM 97 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHH-CCCTTBCCEEEEECSSS-CEE
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHh-CCCCCcccEEEEEccCC-cee
Confidence 3455667999999999998643 333 58999875432 2223467788888877 69999999999998765 899
Q ss_pred EEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 759 VYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
||||+++|+|.+++. .+++..+..++.|+++||+|||. .+|+||||||+||+++.+ ..++++|||.+....
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATR--DLVKIGDFGLMRALP 172 (291)
T ss_dssp EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEET--TEEEECCCTTCEECC
T ss_pred eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCC--CCEEEcccccccccc
Confidence 999999999999985 38999999999999999999994 589999999999999865 468899999876432
Q ss_pred ---------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccc
Q 002105 835 ---------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWV 904 (966)
Q Consensus 835 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (966)
....+|+.|+|||+..+..++.++||||||+++|||+| |+.||.... ........ .....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~---~~~~~----- 242 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKI---DKEGE----- 242 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHH---HTSCC-----
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--HHHHHHHH---HccCC-----
Confidence 12346778999999988889999999999999999999 999987542 11111111 11110
Q ss_pred cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105 905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES 949 (966)
Q Consensus 905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~ 949 (966)
.+......+ .++.+++.+|++.||++|||+.++++.|++
T Consensus 243 ~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 281 (291)
T 1u46_A 243 RLPRPEDCP------QDIYNVMVQCWAHKPEDRPTFVALRDFLLE 281 (291)
T ss_dssp CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCcCcC------HHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 000111122 356678889999999999999999999998
No 253
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.1e-34 Score=324.07 Aligned_cols=256 Identities=14% Similarity=0.201 Sum_probs=186.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcC--------CCceeEEeeEEe----c
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIM--------HPNIVRLHGVCR----S 752 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~--------H~niv~l~g~~~----~ 752 (966)
+.....+|+|++|.||+|+...++..||||++... ....+.+.+|+..+.+ ++ |||||++++++. .
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~-l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKS-VRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHH-HHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHH-HhhcCCCCCCcceeeeeecceeecCCC
Confidence 34555679999999999999888999999998532 2233457778877776 34 888999999997 5
Q ss_pred CCeeEEEEEccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC---------
Q 002105 753 EKAAYLVYEYIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD--------- 818 (966)
Q Consensus 753 ~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~--------- 818 (966)
....++||||+ +|++.+++. .+++..+..++.||+.||+|||..+ +|+||||||+|||++.+.
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhh
Confidence 56899999999 556666553 3899999999999999999999432 899999999999998653
Q ss_pred --------------------------------------CceEEEeccccceec---CCCCcCCcccccccccCCCCCCCc
Q 002105 819 --------------------------------------EPHLRLSVPGLAYCT---DSKSINSSAYVAPETKESKDITEK 857 (966)
Q Consensus 819 --------------------------------------~~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~ 857 (966)
...++++|||.+... .....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 126899999998653 234578999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCCCCCCch----hhHHHHHHHhhccC---------cccccccc----------c-------
Q 002105 858 GDIYGFGLILIDLLTGKSPADADFGVH----ESIVEWARYCYSDC---------HLDTWVDP----------F------- 907 (966)
Q Consensus 858 ~Dv~S~Gv~l~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~---------~~~~~~d~----------~------- 907 (966)
+|||||||++|||+||+.||....... .............. ....+... .
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 999999999999999999997543211 00001111000000 00000000 0
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+........+...++.+++.+|++.||++|||++||++
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00001112344567888999999999999999999875
No 254
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.1e-33 Score=317.79 Aligned_cols=253 Identities=17% Similarity=0.220 Sum_probs=180.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCC------ee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK------AA 756 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~------~~ 756 (966)
+.....+|+|++|.||+|+...++..||||++.... ....+.+.+|+..+.+ ++|||||++++++...+ ..
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHH-CCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHh-cCCCCccceEEeeccccccccccce
Confidence 345566799999999999998899999999986532 1223456778877776 79999999999998654 78
Q ss_pred EEEEEccCCCCHHHHHH-cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105 757 YLVYEYIEGKELSEVLR-NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD- 834 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~- 834 (966)
|+||||+++ +|.++++ .+++.....++.||+.||+||| +.+|+||||||+||+++.+. .++++|||++....
T Consensus 106 ~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 106 YIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGT 179 (371)
T ss_dssp EEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTS--CEEECCCCC------
T ss_pred EEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCC--CEEEEEeeccccccc
Confidence 999999984 7888776 5899999999999999999999 45899999999999999654 57899999986432
Q ss_pred ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH-----------------
Q 002105 835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARY----------------- 893 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----------------- 893 (966)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+... .+........
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 234689999999999999999999999999999999999999975421 1111000000
Q ss_pred -hhcc-Cc-----ccccccccccCCCc-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 894 -CYSD-CH-----LDTWVDPFIRGHVS-SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 894 -~~~~-~~-----~~~~~d~~~~~~~~-~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.... .. .............. .......++.+++.+|++.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 00 00000000000000 01122456788999999999999999999975
No 255
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.8e-33 Score=306.97 Aligned_cols=251 Identities=20% Similarity=0.254 Sum_probs=183.7
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
....+|+|++|.||+|+...+|..||||++.... ....+.+.+|+..+.+ ++||||+++++++..++..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPNIVKLLDVIHTENKLYLVFEFLH 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHH-cCCCCeeeEEEEEecCCceEEEEEccc
Confidence 3455788999999999998899999999875432 2223557788888777 699999999999999999999999998
Q ss_pred CCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105 765 GKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------ 833 (966)
Q Consensus 765 ~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------ 833 (966)
|+|.+++. .+++..+..++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+...
T Consensus 86 -~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 -QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp -EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTS--CEEECSTTHHHHHCCCSBC
T ss_pred -CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCC--CEEECcchhhhhccCCccc
Confidence 69999985 37899999999999999999994 5899999999999998654 5789999987542
Q ss_pred CCCCcCCcccccccccCCCC-CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhc-cC-cccc-----ccc
Q 002105 834 DSKSINSSAYVAPETKESKD-ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYS-DC-HLDT-----WVD 905 (966)
Q Consensus 834 ~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~d 905 (966)
.....+|+.|+|||.+.+.. ++.++|||||||++|||+||+.||.+... .+........... .. .... ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 22346789999999987765 79999999999999999999999976422 2222122211100 00 0000 000
Q ss_pred ccccCCC-cchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 906 PFIRGHV-SSIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 906 ~~~~~~~-~~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+...... .... ....++.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1110000 0000 01135667888999999999999999886
No 256
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.2e-33 Score=306.37 Aligned_cols=241 Identities=20% Similarity=0.277 Sum_probs=185.7
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc---------cccchHHHHHHHHhhcCCCceeEEeeEEecCCee
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI---------TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAA 756 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~---------~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~ 756 (966)
.....+|+|++|.||+|+...+|..||||.+...... ..+.+.+|+..+.++..||||+++++++..++..
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 99 (298)
T 1phk_A 20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99 (298)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred ceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeE
Confidence 3445578899999999999889999999998654311 1234677888887743599999999999999999
Q ss_pred EEEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105 757 YLVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~ 833 (966)
++||||+++|+|.++++ .+++..+..++.|++.||+||| ..+|+||||||+||+++.+. .+++.|||.+...
T Consensus 100 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~ 174 (298)
T 1phk_A 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQL 174 (298)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCC--cEEEecccchhhc
Confidence 99999999999999996 4899999999999999999999 45899999999999998654 4789999987653
Q ss_pred C-----CCCcCCcccccccccC------CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccc
Q 002105 834 D-----SKSINSSAYVAPETKE------SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDT 902 (966)
Q Consensus 834 ~-----~~~~~~~~y~aPE~~~------~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (966)
. ....+++.|+|||++. ...++.++||||||+++|||++|+.||.... ........ ... ...
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~---~~~-~~~- 247 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--QMLMLRMI---MSG-NYQ- 247 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHT-CCC-
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--HHHHHHHH---hcC-Ccc-
Confidence 2 2346899999999874 5568999999999999999999999986532 11111111 111 000
Q ss_pred cccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 903 WVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 903 ~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...+.. ..+ ..++.+++.+|++.||++|||+.|+++
T Consensus 248 ~~~~~~-~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FGSPEW-DDY------SDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCTTTG-GGS------CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCcccc-ccc------CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 011111 011 135667888999999999999999875
No 257
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.8e-33 Score=314.93 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=185.1
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc-cccchHHHHHHHHhhcCCCceeEEeeEEecC-----CeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI-TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-----KAAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~-~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-----~~~~l 758 (966)
+.....+|+|++|.||+|+...++..||||++...... ..+.+.+|+..+.+ ++|||||++++++... ...|+
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR-FRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHH-CCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHh-cCCCCCccceeEEecCCccccceEEE
Confidence 44556679999999999999889999999998643322 23557788888877 6999999999999764 46899
Q ss_pred EEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 759 VYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
||||++ |+|.++++ .+++..+..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 108 v~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPD 181 (364)
T ss_dssp EEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCGG
T ss_pred EEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCC--CEEEEeCcceEecCCC
Confidence 999998 59999986 4899999999999999999999 45899999999999998654 47899999886422
Q ss_pred -------CCCcCCcccccccccC-CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccc---c-
Q 002105 835 -------SKSINSSAYVAPETKE-SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLD---T- 902 (966)
Q Consensus 835 -------~~~~~~~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~- 902 (966)
....||+.|+|||++. ...++.++|||||||++|||+||+.||.+.... +.+..... .......+ .
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~-~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILG-ILGSPSQEDLNCI 259 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHHH-HHCSCCHHHHHTC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHH-HhCCCCHHHHHHh
Confidence 2347899999999865 455899999999999999999999999764321 11111111 00000000 0
Q ss_pred -------cccccccCCCcchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 903 -------WVDPFIRGHVSSIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 903 -------~~d~~~~~~~~~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+............. ....++.+++.+|++.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000000 01135677889999999999999999975
No 258
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.1e-33 Score=322.76 Aligned_cols=187 Identities=17% Similarity=0.281 Sum_probs=155.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecC-----CeeE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-----KAAY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-----~~~~ 757 (966)
+.....+|+|++|.||+|+...++..||||++.... ....+.+.+|+..+.+ ++|||||++++++... +..|
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR-LKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHH-CCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHH-cCCCCcceEEEEEecCCCCcCCeEE
Confidence 344556799999999999998899999999986432 2233567788888877 6999999999999776 5789
Q ss_pred EEEEccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 758 LVYEYIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
+||||++ |+|.++++. +++.....++.||++||+||| +.+|+||||||+|||++.+. .++++|||++....
T Consensus 107 lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~--~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTIN 180 (432)
T ss_dssp EEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEEC-
T ss_pred EEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCC--CEEEccCCCccccc
Confidence 9999998 599999974 899999999999999999999 45899999999999998654 57999999986421
Q ss_pred ----------------------------CCCcCCccccccccc-CCCCCCCcchHHHHHHHHHHHHcCCCCCC
Q 002105 835 ----------------------------SKSINSSAYVAPETK-ESKDITEKGDIYGFGLILIDLLTGKSPAD 878 (966)
Q Consensus 835 ----------------------------~~~~~~~~y~aPE~~-~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~ 878 (966)
...+||+.|+|||++ ....|+.++||||+||++|||+||..|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 334689999999985 56679999999999999999998655543
No 259
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.7e-33 Score=305.30 Aligned_cols=242 Identities=21% Similarity=0.338 Sum_probs=187.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
+.....+|+|++|.||+|+...++..||+|++.... ....+.+.+|+..+.+ ++||||+++++++..++..++||||
T Consensus 24 y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~ 102 (287)
T 2wei_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK-LDHPNIMKLFEILEDSSSFYIVGEL 102 (287)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHh-ccCCCccEEEEEEeCCCeEEEEEEc
Confidence 344556789999999999998889999999986532 2234457788888877 6999999999999999999999999
Q ss_pred cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecCC---
Q 002105 763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTDS--- 835 (966)
Q Consensus 763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~~--- 835 (966)
+++++|.+++. .+++.++..++.|++.||+|||. .+|+||||||+||+++.+. ...++++|||.+.....
T Consensus 103 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 99999999885 48999999999999999999994 5899999999999998643 35689999998764322
Q ss_pred --CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105 836 --KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS 913 (966)
Q Consensus 836 --~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 913 (966)
...+++.|+|||.+.+ .++.++||||||+++|||+||+.||.... ...+.+.+. .. ... .+.......+
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~---~~-~~~--~~~~~~~~~~ 250 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKRVE---TG-KYA--FDLPQWRTIS 250 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HC-CCC--CCSGGGTTSC
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHH---cC-CCC--CCchhhhhcC
Confidence 2246788999998876 48999999999999999999999987532 111111111 11 100 0000001111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++.+++.+|++.||++|||+.|+++
T Consensus 251 ------~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 251 ------DDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ------HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------HHHHHHHHHHcccChhhCcCHHHHhc
Confidence 24667888999999999999999986
No 260
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-32 Score=306.39 Aligned_cols=307 Identities=21% Similarity=0.370 Sum_probs=176.8
Q ss_pred ccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCE
Q 002105 81 IFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKV 160 (966)
Q Consensus 81 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 160 (966)
+..+++|++|++++|.+. .+|. +..+++|++|+|++|.+++..++..+++|++|+|++|.++. + +.+..+++|++
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITD-I-SALQNLTNLRE 114 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSE
T ss_pred chhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCccccchhhhcCCcCCEEEccCCcccC-c-hHHcCCCcCCE
Confidence 345667777777777776 4553 45567777777777777765456677777777777777764 2 34667777777
Q ss_pred EEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccc
Q 002105 161 LDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNL 240 (966)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 240 (966)
|++++|.+.+..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 7777777664332 6666667777776665443333 25666666666666666653322 55666666666666665
Q ss_pred cccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCC
Q 002105 241 TGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSL 320 (966)
Q Consensus 241 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 320 (966)
.+. +. +..+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+
T Consensus 190 ~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~ 261 (347)
T 4fmz_A 190 EDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAV 261 (347)
T ss_dssp CCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhH
Confidence 532 22 5555666666666666554322 5555666666666665554322 45555555555555555432 234
Q ss_pred CCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCce
Q 002105 321 ASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRR 400 (966)
Q Consensus 321 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 400 (966)
..+++|+.|++++|.+++. ..+..+++|+.|++++|. +++..|..+..+++|++
T Consensus 262 ~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~------------------------l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ------------------------LGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC------------------------CCGGGHHHHHTCTTCSE
T ss_pred hcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc------------------------CCCcChhHhhccccCCE
Confidence 4555555555555555432 234444444444444444 44444444555556666
Q ss_pred eeccccccCCcCChhhcCCCcccEEcccCCCCC
Q 002105 401 VRLQNNRLSGELSSEFTRLPLVYFLDISGNDLS 433 (966)
Q Consensus 401 L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~ 433 (966)
|++++|++++..| +..+++|++||+++|.++
T Consensus 316 L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 316 LFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666666655544 555666666666666653
No 261
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.7e-32 Score=305.97 Aligned_cols=305 Identities=23% Similarity=0.307 Sum_probs=167.2
Q ss_pred cCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEc
Q 002105 108 SSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTL 187 (966)
Q Consensus 108 ~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 187 (966)
.+++|++|++++|.+.....+..+++|++|++++|.+++. +. +..+++|++|++++|.+.. +| .+.++++|++|++
T Consensus 42 ~l~~L~~L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l 117 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYL 117 (347)
T ss_dssp HHTTCSEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred hcccccEEEEeCCccccchhhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEEC
Confidence 3466677777766665433345566666666666666543 22 5666666666666665553 22 3555566666666
Q ss_pred cCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCC
Q 002105 188 ASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGS 267 (966)
Q Consensus 188 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 267 (966)
++|.+.+..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+.+.
T Consensus 118 ~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 118 NEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp TTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC
T ss_pred cCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc
Confidence 6655553222 5555555555555554332222 24555555555555555443221 44445555555555544432
Q ss_pred CChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCC
Q 002105 268 IPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQ 347 (966)
Q Consensus 268 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~ 347 (966)
.+ +..+++|+.|++++|.++ +..+ +..+++|+.|++++|.+++..+ +..+
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~------------------------~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l 242 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQIT------------------------DITP--VANMTRLNSLKIGNNKITDLSP--LANL 242 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCC------------------------CCGG--GGGCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccCCCccceeecccCCCC------------------------CCch--hhcCCcCCEEEccCCccCCCcc--hhcC
Confidence 11 444444444444444444 3222 3444445555555554443222 4444
Q ss_pred CCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcc
Q 002105 348 NNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDI 427 (966)
Q Consensus 348 ~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdL 427 (966)
++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+..|..+++|++|++
T Consensus 243 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 243 SQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 5555555555554432 2344444555555555555443 34667778888888888887777777777888888888
Q ss_pred cCCCCCCccCcchhccCCCcEecCCCCcCC
Q 002105 428 SGNDLSGRIGEQKWEMTSLQMLNLAGNNFS 457 (966)
Q Consensus 428 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 457 (966)
++|++++..| +..+++|++|++++|.|+
T Consensus 319 ~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 319 SQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCccccccC--hhhhhccceeehhhhccc
Confidence 8888777655 666777777777777664
No 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-33 Score=309.27 Aligned_cols=238 Identities=17% Similarity=0.254 Sum_probs=181.1
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec------CCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------EKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------~~~~~lv 759 (966)
.....+|+|++|.||+|+...++..||||++.... ...+.+.+|+..+.++.+||||+++++++.. .+..++|
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv 105 (326)
T 2x7f_A 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 105 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEE
T ss_pred EEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEE
Confidence 44556789999999999998899999999885432 3345688888888885589999999999986 4688999
Q ss_pred EEccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 760 YEYIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|||+++|+|.++++ .+++.....++.||+.||+|||. .+|+||||||+||+++.+. .+++.|||.+....
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLD 180 (326)
T ss_dssp EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTC--CEEECCCTTTC---
T ss_pred EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCC--CEEEeeCcCceecC
Confidence 99999999999996 38899999999999999999994 5899999999999998654 47899999875422
Q ss_pred ------CCCcCCcccccccccC-----CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc
Q 002105 835 ------SKSINSSAYVAPETKE-----SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW 903 (966)
Q Consensus 835 ------~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (966)
....||+.|+|||++. +..++.++|||||||++|||+||+.||..... ........ .. ....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~----~~-~~~~- 253 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-MRALFLIP----RN-PAPR- 253 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHH----HS-CCCC-
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHhh----cC-cccc-
Confidence 2346899999999986 56789999999999999999999999864321 11111111 11 0000
Q ss_pred ccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 904 VDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 904 ~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.....++ .++.+++.+||+.||++|||++|+++
T Consensus 254 ---~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 254 ---LKSKKWS------KKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ---CSCSCSC------HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---CCccccC------HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0111122 24667788999999999999999875
No 263
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=312.29 Aligned_cols=240 Identities=21% Similarity=0.270 Sum_probs=182.5
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
.....+|+|++|.||+|+.. ..+|+|++.... ....+.+.+|+..+.+ ++|||||++++++.+++..++||||+
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~---~~~avk~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~iv~e~~ 111 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQ-TRHENVVLFMGACMSPPHLAIITSLC 111 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEES---SSEEEEECCCCSCCCCCCCCCCTTGGGGTT-CCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred EEeeEeccCCceEEEEEEEc---CeEEEEEeecCCCCHHHHHHHHHHHHHHhc-CCCCCEeEEEEEEecCCceEEEeecc
Confidence 44556799999999999873 248999875432 2334567788877777 69999999999999999999999999
Q ss_pred CCCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105 764 EGKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------ 833 (966)
Q Consensus 764 ~~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------ 833 (966)
++|+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||++++ ..++++|||.+...
T Consensus 112 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~~---~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 112 KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDN---GKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC-----CCEECCCSCCC--------
T ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEeC---CCEEEeecCCcccccccccc
Confidence 99999999963 8899999999999999999994 58999999999999984 35688999975431
Q ss_pred -----CCCCcCCcccccccccCC---------CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc
Q 002105 834 -----DSKSINSSAYVAPETKES---------KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH 899 (966)
Q Consensus 834 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 899 (966)
.....|++.|+|||.+.. ..++.++|||||||++|||+||+.||.... .+...... ...
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~---~~~-- 258 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP--AEAIIWQM---GTG-- 258 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC--HHHHHHHH---HTT--
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHh---ccC--
Confidence 112347889999998864 457889999999999999999999987532 11111111 111
Q ss_pred cccccccccc-CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 900 LDTWVDPFIR-GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 900 ~~~~~d~~~~-~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
..|... ...+ .++.+++.+||+.||++|||++||+++|+++.+
T Consensus 259 ----~~~~~~~~~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 259 ----MKPNLSQIGMG------KEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp ----CCCCCCCSSCC------TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred ----CCCCCCcCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 111111 1111 146678889999999999999999999998443
No 264
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.1e-33 Score=314.54 Aligned_cols=243 Identities=18% Similarity=0.264 Sum_probs=167.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...+|..||||++..... ....++..|+..+.+.++|||||+++|++..++..++||||++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~ 104 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS 104 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence 345567899999999999988999999999865422 2334566777766666899999999999999999999999999
Q ss_pred CCCHHHHHH--------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 765 GKELSEVLR--------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 765 ~g~L~~~l~--------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
+ +|.+++. .+++..+..++.|++.||+|||.. .+|+||||||+||+++.+ ..++++|||.+....
T Consensus 105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRS--GNIKLCDFGISGQLVDS 179 (327)
T ss_dssp E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETT--TEEEECCCSSSCC----
T ss_pred C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCC--CCEEEccCCCceecccc
Confidence 5 8877764 378999999999999999999942 289999999999999865 468999999875422
Q ss_pred ---CCCcCCccccccccc----CCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 835 ---SKSINSSAYVAPETK----ESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~----~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
....||+.|+|||++ .+..++.++|||||||++|||+||+.||....... +....... ..... +...
T Consensus 180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~-~~~~~-~~~~ 253 (327)
T 3aln_A 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVK-GDPPQ-LSNS 253 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCC-SCCCC-CCCC
T ss_pred cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhc-CCCCC-CCCc
Confidence 223688999999998 56678999999999999999999999987532111 11110010 00000 0000
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.....+ .++.+++.+||+.||++|||+.||++
T Consensus 254 ~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 254 EEREFS------PSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SSCCCC------HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccccCC------HHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 011111 25667888999999999999999864
No 265
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.3e-33 Score=316.75 Aligned_cols=253 Identities=14% Similarity=0.217 Sum_probs=187.6
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccc-----------------cchHHHHHHHHhhcCCCceeEEe
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITT-----------------SSFWPDVSQFGKLIMHPNIVRLH 747 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~-----------------~~~~~e~~~~~~~~~H~niv~l~ 747 (966)
+.....+|+|++|.||+|+. +|..||||++........ +.+.+|+..+.+ ++|||||+++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~ 109 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD-IKNEYCLTCE 109 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTT-CCCTTBCCCS
T ss_pred eEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHh-CCCCCcceEE
Confidence 34455678999999999997 899999999864322111 567888888877 6999999999
Q ss_pred eEEecCCeeEEEEEccCCCCHHHH------HH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC
Q 002105 748 GVCRSEKAAYLVYEYIEGKELSEV------LR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG 816 (966)
Q Consensus 748 g~~~~~~~~~lv~Ey~~~g~L~~~------l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~ 816 (966)
+++.+++..++||||+++|+|.++ ++ .+++..+..++.|++.||+|||. ..+|+||||||+||+++.
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcC
Confidence 999999999999999999999998 53 38899999999999999999995 159999999999999986
Q ss_pred CCCceEEEeccccceecC----CCCcCCcccccccccCCC-CCCC-cchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHH
Q 002105 817 KDEPHLRLSVPGLAYCTD----SKSINSSAYVAPETKESK-DITE-KGDIYGFGLILIDLLTGKSPADADFGVHESIVEW 890 (966)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~ 890 (966)
+. .++++|||.+.... ....+++.|+|||...+. .++. ++|||||||++|||+||+.||.......+.. +.
T Consensus 188 ~~--~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~ 264 (348)
T 2pml_X 188 NG--RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF-NN 264 (348)
T ss_dssp TS--CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH-HH
T ss_pred CC--cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH-HH
Confidence 54 57899999886532 345689999999999877 6766 9999999999999999999997643322222 22
Q ss_pred HHHhhccC--cccccccccccCCCcc-hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 891 ARYCYSDC--HLDTWVDPFIRGHVSS-IQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 891 ~~~~~~~~--~~~~~~d~~~~~~~~~-~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
........ ....+..+........ ......++.+++.+|++.||++|||++|+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11110000 0000111111000000 0011235677888999999999999999975
No 266
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=321.68 Aligned_cols=235 Identities=20% Similarity=0.248 Sum_probs=174.8
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
....+|+|++|.||... ..+++.||||++.... .+.+.+|+..+.++.+|||||++++++.+++..|+|||||+ |
T Consensus 28 ~~~~LG~G~~G~V~~~~-~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEECGGGCEEEEE-ESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred cCCeeecCcCEEEEEEE-EeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 33457888999876544 4789999999985422 23467888888774489999999999999999999999997 6
Q ss_pred CHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC---CCCceEEEeccccceecC-----
Q 002105 767 ELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG---KDEPHLRLSVPGLAYCTD----- 834 (966)
Q Consensus 767 ~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~---~~~~~~~~~~~~~~~~~~----- 834 (966)
+|.+++.. ..+.....++.||++||+|||. .+|+||||||+||+++. +...+++++|||++....
T Consensus 103 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 103 TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 99999964 4455677899999999999994 58999999999999953 344567899999986422
Q ss_pred ----CCCcCCcccccccccC---CCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105 835 ----SKSINSSAYVAPETKE---SKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDP 906 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~---~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 906 (966)
....||+.|+|||++. ...++.++|||||||++|||+| |+.||....... ............ ..+
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~------~~~~~~~~~~~~-~~~ 252 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ------ANILLGACSLDC-LHP 252 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH------HHHHTTCCCCTT-SCT
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH------HHHHhccCCccc-cCc
Confidence 2346899999999987 4667889999999999999999 899985432111 111111111110 111
Q ss_pred cccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002105 907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVT 944 (966)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~ 944 (966)
. ...-..+.+++.+|++.||++|||++||+
T Consensus 253 ------~--~~~~~~~~~li~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 253 ------E--KHEDVIARELIEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp ------T--CHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ------c--ccccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence 0 12223466788999999999999999998
No 267
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.1e-33 Score=311.24 Aligned_cols=251 Identities=19% Similarity=0.277 Sum_probs=185.8
Q ss_pred cccccCCCCCccEEEEEEE-ecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCC------ceeEEeeEEecCCeeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRS-LANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHP------NIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~------niv~l~g~~~~~~~~~l 758 (966)
.....+|+|++|.||+|.. ..++..||||++.... ...+.+.+|+..+.+ ++|+ +|+++++++..++..++
T Consensus 17 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~-l~~~~~~~~~~i~~~~~~~~~~~~~~l 94 (339)
T 1z57_A 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEH-LNTTDPNSTFRCVQMLEWFEHHGHICI 94 (339)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHH-HHHHCTTCTTCBCCEEEEEEETTEEEE
T ss_pred EEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHH-hhhcCCCCceeeEeeecccccCCcEEE
Confidence 4455678999999999987 4578889999875432 223456777776666 4554 59999999999999999
Q ss_pred EEEccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC---------------
Q 002105 759 VYEYIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD--------------- 818 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~--------------- 818 (966)
||||+ +|+|.+++. .+++..+..++.|+++||+||| +.+|+||||||+||+++...
T Consensus 95 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 95 VFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99999 899999986 3789999999999999999999 45899999999999998644
Q ss_pred --CceEEEeccccceecC---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH
Q 002105 819 --EPHLRLSVPGLAYCTD---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARY 893 (966)
Q Consensus 819 --~~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 893 (966)
...++++|||.+.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+.. .....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~-~~~~~ 248 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS-KEHL-AMMER 248 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH-HHHH-HHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHH-HHHHH
Confidence 4568999999986533 335789999999999999999999999999999999999999975421 1111 11111
Q ss_pred hhccC--------cccc--------cc-------------cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002105 894 CYSDC--------HLDT--------WV-------------DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVT 944 (966)
Q Consensus 894 ~~~~~--------~~~~--------~~-------------d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~ 944 (966)
..... .... |. .+.. ...........++.+++.+|++.||++|||++||+
T Consensus 249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK-EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG-GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchh-hhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 10000 0000 00 0000 00000123345678899999999999999999987
Q ss_pred H
Q 002105 945 K 945 (966)
Q Consensus 945 ~ 945 (966)
+
T Consensus 328 ~ 328 (339)
T 1z57_A 328 K 328 (339)
T ss_dssp T
T ss_pred c
Confidence 5
No 268
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.4e-32 Score=305.44 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=184.6
Q ss_pred ccccccCCCCCccEEEEEEEe-cCCcEEEEEEEeccC--cccccchHHHHHHHHhh--cCCCceeEEeeEEe-----cCC
Q 002105 685 EENLTSRGKKGVSSSYKVRSL-ANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKL--IMHPNIVRLHGVCR-----SEK 754 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~-~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~--~~H~niv~l~g~~~-----~~~ 754 (966)
+.....+|+|++|.||+|+.. .+|..||+|++.... ......+.+|+..+.++ ++|||||+++++|. .+.
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 344556789999999999984 578889999886432 22334567777666552 38999999999997 556
Q ss_pred eeEEEEEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccc
Q 002105 755 AAYLVYEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGL 829 (966)
Q Consensus 755 ~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~ 829 (966)
..++||||++ |+|.++++. +++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~--~~kl~Dfg~ 166 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSG--QIKLADFGL 166 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTC--CEEECSCCS
T ss_pred eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCC--CEEEecCcc
Confidence 7899999999 699999863 8899999999999999999994 5899999999999998654 578999998
Q ss_pred ceecC-----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccc
Q 002105 830 AYCTD-----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWV 904 (966)
Q Consensus 830 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (966)
+.... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||..... .+.+..... .........|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~-~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILD-VIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHH-HHCCCCGGGSC
T ss_pred cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHH-HcCCCCcccCc
Confidence 75422 345689999999999999999999999999999999999999975422 111111111 11100000000
Q ss_pred c--------------ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 905 D--------------PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 905 d--------------~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
. +.+....... ..++.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDI---DELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSC---CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccchhhhcccCcchhhhccccC---CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0000000111 124567888999999999999999984
No 269
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=309.63 Aligned_cols=252 Identities=20% Similarity=0.295 Sum_probs=180.3
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEe--------------
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCR-------------- 751 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~-------------- 751 (966)
.....+|+|++|.||+|+...+++.||+|++........+.+.+|+..+.+ ++|||||++++++.
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 14 MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR-LDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHh-cCCCCeeEEEEecccccccccccccccc
Confidence 445567999999999999988899999999876554445668888888887 69999999999884
Q ss_pred cCCeeEEEEEccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccc
Q 002105 752 SEKAAYLVYEYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGL 829 (966)
Q Consensus 752 ~~~~~~lv~Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~ 829 (966)
+.+..++||||++ |+|.++++. +++.....++.|+++||+||| +.+|+||||||+||+++.+ ...++++|||.
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~-~~~~kl~Dfg~ 167 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTE-DLVLKIGDFGL 167 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETT-TTEEEECCCTT
T ss_pred ccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCC-CCeEEEccCcc
Confidence 3467899999998 699999974 889999999999999999999 4589999999999999743 24689999998
Q ss_pred ceecC---------CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccC-
Q 002105 830 AYCTD---------SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDC- 898 (966)
Q Consensus 830 ~~~~~---------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 898 (966)
+.... ....+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||..... .+........ ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~-~~~~~ 245 (320)
T 2i6l_A 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-LEQMQLILES-IPVVH 245 (320)
T ss_dssp CBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHH-SCCCC
T ss_pred ccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHh-cCCCc
Confidence 76422 12346888999998755 6789999999999999999999999975421 1111111110 0000
Q ss_pred ---------cccccccccccCCCcchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 899 ---------HLDTWVDPFIRGHVSSIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 899 ---------~~~~~~d~~~~~~~~~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.....+............ ....++.+++.+|++.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000000000000000000 01235677888999999999999999975
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.9e-33 Score=312.03 Aligned_cols=276 Identities=21% Similarity=0.322 Sum_probs=148.0
Q ss_pred CCcHHHHHHHHHHhhcC-CCCCCCCCCC----CCCCCCCcccceeeCC---------CCCEEEEEcCCCCcccccccccc
Q 002105 17 TCHGAELELLLSFKSTV-NDPYNFLSNW----DSSVTFCKWNGISCQN---------STHVNAIELSAKNISGKISSSIF 82 (966)
Q Consensus 17 ~~~~~~~~~Ll~~k~~~-~~~~~~l~~w----~~~~~~c~w~gv~c~~---------~~~v~~L~L~~~~l~~~~~~~~~ 82 (966)
.+..+|++||++||+++ .|+.+.+++| ....++|.|.|++|+. .++|+.|+|++|+++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 35568999999999988 4777778889 3446899999999953 134555555555554 4444454
Q ss_pred CCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEE
Q 002105 83 HLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLD 162 (966)
Q Consensus 83 ~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 162 (966)
++++|++|+|++|.++ .+|..+ +.+++|++|+|++|.++ .+|..++.+++|++|+
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~-----------------------~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTM-----------------------QQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCG-----------------------GGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred hCCCCCEEECCCCCcc-chhHHH-----------------------hccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 5555555555555554 444332 34455555555555555 4566666666666666
Q ss_pred ccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccc
Q 002105 163 LGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTG 242 (966)
Q Consensus 163 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 242 (966)
|++|++.+.+|..+... ..+..+..+++|++|+|++|.++ .+|..++++++|++|++++|++++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 66666666666554430 01111223444444444444444 344444444444444444444442
Q ss_pred cCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCC
Q 002105 243 QIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLAS 322 (966)
Q Consensus 243 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 322 (966)
+|..++++++|++|++++|.+.+.+|..+.++++|++|++++|.+.+.+|..+..+++|+.|++++|++.+.+|.++++
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 3334444444444444444444444444444444444444444444444444444444444444444444444444555
Q ss_pred CCCccEEEccCCc
Q 002105 323 MPKLQVLQLWSNQ 335 (966)
Q Consensus 323 l~~L~~L~L~~N~ 335 (966)
+++|+.+++..+.
T Consensus 300 L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 300 LPANCIILVPPHL 312 (328)
T ss_dssp SCTTCEEECCGGG
T ss_pred ccCceEEeCCHHH
Confidence 5555555444433
No 271
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.6e-33 Score=313.18 Aligned_cols=254 Identities=19% Similarity=0.179 Sum_probs=173.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCe-------eE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKA-------AY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~-------~~ 757 (966)
+.....+|+|++|.||+|+...+|..||||++.... .....+..++..+.+ ++|||||+++++|...+. .+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAV-LHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp EEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHH-HCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHh-cCCCCcccHHHhhhccccccccceeEE
Confidence 344556799999999999998899999999986532 233456667767776 699999999999975433 78
Q ss_pred EEEEccCCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 758 LVYEYIEGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
+||||+++ +|.+.+. .+++.....++.|++.||+|||.+ ..+|+||||||+||+++.. ...++++|||.+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~-~~~~kl~Dfg~a 179 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEA-DGTLKLCDFGSA 179 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETT-TTEEEECCCTTC
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCC-CCcEEEeeCCCc
Confidence 99999996 4544432 378899999999999999999954 6699999999999999852 346899999998
Q ss_pred eecC-----CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhcc-------
Q 002105 831 YCTD-----SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSD------- 897 (966)
Q Consensus 831 ~~~~-----~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 897 (966)
.... ....||+.|+|||++.+. .++.++|||||||++|||+||+.||..... ...+....+.....
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCPSREVLRK 258 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHH
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCCCHHHHHh
Confidence 6432 234689999999998655 489999999999999999999999976422 22221222110000
Q ss_pred --CcccccccccccCCCc-------chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 898 --CHLDTWVDPFIRGHVS-------SIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 898 --~~~~~~~d~~~~~~~~-------~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..... .+.......+ .......++.+++.+|++.||++|||+.||++
T Consensus 259 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 259 LNPSHTD-VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCTTCCC-GGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccchhh-ccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 0000000000 00012346778889999999999999999985
No 272
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.4e-33 Score=304.11 Aligned_cols=236 Identities=19% Similarity=0.252 Sum_probs=179.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC----cccccchHHHHHHHHhhcCCCceeEEeeEEe--cCCeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN----TITTSSFWPDVSQFGKLIMHPNIVRLHGVCR--SEKAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~----~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~--~~~~~~lv 759 (966)
.....+|+|++|.||++....++..||+|.+.... ....+.+.+|+..+.+ ++|||||++++++. +.+..++|
T Consensus 8 ~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR-LRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp CCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEECC---CEEEE
T ss_pred eEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHh-cCCCCeeEEEEEEEcCCCCeEEEE
Confidence 33455788999999999998899999999986432 2233557788888777 69999999999984 45678999
Q ss_pred EEccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 760 YEYIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|||+++| |.+++. .+++..+..++.|+++||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 87 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~--~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGG--TLKISALGVAEALH 160 (305)
T ss_dssp EECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC--CEEECCCTTCEECC
T ss_pred ehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCC--cEEeeccccccccC
Confidence 9999977 777765 38899999999999999999994 5899999999999998654 57899999876432
Q ss_pred --------CCCcCCcccccccccCCCC--CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccc
Q 002105 835 --------SKSINSSAYVAPETKESKD--ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWV 904 (966)
Q Consensus 835 --------~~~~~~~~y~aPE~~~~~~--~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (966)
....||+.|+|||+..+.. ++.++|||||||++|||+||+.||.... .....+... .. ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~---~~-~~---- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--IYKLFENIG---KG-SY---- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHH---HC-CC----
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHh---cC-CC----
Confidence 2345899999999987644 3779999999999999999999997532 111111111 11 10
Q ss_pred cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
.+....+ .++.+++.+|++.||++|||++|+++.
T Consensus 231 --~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 --AIPGDCG------PPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CCCSSSC------HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCCCccC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111222 245677889999999999999999864
No 273
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=308.41 Aligned_cols=241 Identities=21% Similarity=0.345 Sum_probs=169.6
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.....+|+|++|.||+|+...+|..||||++..... ....++..|+..+.+.++|||||++++++..++..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 445567999999999999988999999999865432 222345556665556579999999999999999999999999
Q ss_pred CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-----CC
Q 002105 765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-----DS 835 (966)
Q Consensus 765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-----~~ 835 (966)
++.+..+.. .+++..+..++.|+++||+|||.. .+|+||||||+||+++.+. .++++|||.+... ..
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~~~ 182 (318)
T 2dyl_A 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKAKD 182 (318)
T ss_dssp SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTS--CEEECCCTTC----------
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCC--CEEEEECCCchhccCCcccc
Confidence 456665553 489999999999999999999952 2899999999999998654 5789999987542 12
Q ss_pred CCcCCcccccccccC-----CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 836 KSINSSAYVAPETKE-----SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
...+|+.|+|||++. ...++.++|||||||++|||+||+.||.......+.... ..... .+....
T Consensus 183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~------~~~~~~ 252 (318)
T 2dyl_A 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK----VLQEE------PPLLPG 252 (318)
T ss_dssp ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH----HHHSC------CCCCCS
T ss_pred ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH----HhccC------CCCCCc
Confidence 346899999999984 567899999999999999999999999753222222211 11111 011110
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
. .... .++.+++.+||+.||.+||+++|+++
T Consensus 253 ~-~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 253 H-MGFS---GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp S-SCCC---HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c-CCCC---HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 0011 24667788999999999999999874
No 274
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.5e-33 Score=309.43 Aligned_cols=237 Identities=20% Similarity=0.344 Sum_probs=175.5
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec-------------
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------------- 752 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------------- 752 (966)
.....+|+|++|.||+|+...++..||||++... ....+.+.+|+..+.+ ++||||+++++++.+
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLAS-LNHQYVVRYYAAWLERRNFVKPMTAVKK 86 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEECCCCCC------C
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHh-cCchHHHHHHHHHHhhcchhhhhccccc
Confidence 3445678899999999999889999999998542 2233457788887777 699999999999865
Q ss_pred CCeeEEEEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccc
Q 002105 753 EKAAYLVYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPG 828 (966)
Q Consensus 753 ~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~ 828 (966)
.+..|+||||+++|+|.++++ .+++.....++.|+++||+|||. .+|+||||||+||+++.+. .++++|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~--~~kl~dfg 161 (303)
T 1zy4_A 87 KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR--NVKIGDFG 161 (303)
T ss_dssp EEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS--CEEECCCC
T ss_pred CCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC--CEEEeeCc
Confidence 356899999999999999996 36788999999999999999994 4899999999999998654 57899999
Q ss_pred cceecC--------------------CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhH
Q 002105 829 LAYCTD--------------------SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESI 887 (966)
Q Consensus 829 ~~~~~~--------------------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~ 887 (966)
.+.... ....||+.|+|||.+.+. .++.++|||||||++|||++ |+... .+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~---~~~- 234 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG---MER- 234 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---HHH-
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---hhH-
Confidence 875421 123578899999998764 68999999999999999999 44321 111
Q ss_pred HHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 888 VEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 888 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.+....... ... . ..+..... ...++.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~-~~~-~-~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILKKLRS-VSI-E-FPPDFDDN------KMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHS-TTC-C-CCTTCCTT------TSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhccc-ccc-c-cCcccccc------chHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111111 000 0 11111111 1234567888999999999999999985
No 275
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.5e-33 Score=316.09 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=176.6
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCC------eeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK------AAYL 758 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~------~~~l 758 (966)
+.....+|+|+||.||+|+.. .+..||+|++..... ...+|+..+.+ ++|||||+++++|...+ ..++
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~-~~~~~aikk~~~~~~----~~~~E~~il~~-l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLV-ESDEVAIKKVLQDKR----FKNRELQIMRI-VKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TTEEEEEEEEECCTT----SCCHHHHHHHT-CCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEEC-CCCeEEEEEEecCcc----hHHHHHHHHHh-CCCCCcceEEEEEEecCCCCCceEEEE
Confidence 445566799999999999984 455699999865332 23357766666 79999999999996533 3789
Q ss_pred EEEccCCCCHHHHHH------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 759 VYEYIEGKELSEVLR------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
||||++++.+....+ .+++.....++.||++||+||| +.+|+||||||+|||++.. ...++++|||.+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~-~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPP-SGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETT-TTEEEECCCTTCEE
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCC-CCcEEEeeCCCccc
Confidence 999999765443331 4889999999999999999999 4589999999999999832 34689999999864
Q ss_pred c-----CCCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhc---------c
Q 002105 833 T-----DSKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYS---------D 897 (966)
Q Consensus 833 ~-----~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------~ 897 (966)
. .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+... .+.+.+.....-. .
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHC
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhC
Confidence 2 2234689999999998664 589999999999999999999999976532 2222122211000 0
Q ss_pred CcccccccccccCCCcchHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 898 CHLDTWVDPFIRGHVSSIQN-----EIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 898 ~~~~~~~d~~~~~~~~~~~~-----~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.......-|.+... .... ...++.+++.+|++.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 271 PNYMEHKFPQIRPH--PFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp GGGSSSCCCCCCCC--CHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhhccccccCC--cHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00000000000000 0000 1135778889999999999999999875
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.1e-33 Score=318.22 Aligned_cols=257 Identities=16% Similarity=0.237 Sum_probs=185.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhc----------CCCceeEEeeEEecCC
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLI----------MHPNIVRLHGVCRSEK 754 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~----------~H~niv~l~g~~~~~~ 754 (966)
+.....+|+|++|.||+|+...++..||||++... ....+.+.+|+..+.++- .||||+++++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 44455679999999999999889999999988532 223345677777766631 2899999999998654
Q ss_pred ----eeEEEEEccCCCCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC----CCce
Q 002105 755 ----AAYLVYEYIEGKELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK----DEPH 821 (966)
Q Consensus 755 ----~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~----~~~~ 821 (966)
..++||||+ +|+|.+++.. +++..+..++.||+.||+|||.. .+|+||||||+||+++.+ ....
T Consensus 100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCcce
Confidence 789999999 8999999863 89999999999999999999942 289999999999999642 3346
Q ss_pred EEEeccccceecC---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-----hhhHHHHHHH
Q 002105 822 LRLSVPGLAYCTD---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV-----HESIVEWARY 893 (966)
Q Consensus 822 ~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-----~~~~~~~~~~ 893 (966)
++++|||.+.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...... .+.+.+....
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 8999999986532 3457899999999999999999999999999999999999999754321 1111111110
Q ss_pred h-----------------hcc-Cccccccc-------ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 894 C-----------------YSD-CHLDTWVD-------PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 894 ~-----------------~~~-~~~~~~~d-------~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
. +.. ........ ...............++.+++.+|++.||++|||++||++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0 000 00000000 0000001111344567788999999999999999999976
No 277
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.7e-33 Score=310.27 Aligned_cols=232 Identities=21% Similarity=0.295 Sum_probs=184.4
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc------cccchHHHHHHHHhhc-CCCceeEEeeEEecCCeeEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI------TTSSFWPDVSQFGKLI-MHPNIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~------~~~~~~~e~~~~~~~~-~H~niv~l~g~~~~~~~~~l 758 (966)
.....+|+|++|.||+|+...++..||||++...... ..+.+..|+..+.++- .||||+++++++..++..++
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~l 125 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 125 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEE
Confidence 3445679999999999999889999999998654322 2356778888887742 36999999999999999999
Q ss_pred EEEccCC-CCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 759 VYEYIEG-KELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 759 v~Ey~~~-g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
||||+.+ ++|.+++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.+ ...++++|||.+....
T Consensus 126 v~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~-~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 126 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLK 201 (320)
T ss_dssp EEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred EEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCC-CCCEEEeeCccccccc
Confidence 9999986 89999986 3899999999999999999999 4589999999999999832 3468999999876532
Q ss_pred ----CCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105 835 ----SKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR 909 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 909 (966)
....||+.|+|||++.+..+ +.++|||||||++|||+||+.||... . +... . . . ...
T Consensus 202 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~---~~~~----~-~--~----~~~ 263 (320)
T 3a99_A 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----E---EIIR----G-Q--V----FFR 263 (320)
T ss_dssp SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H---HHHH----C-C--C----CCS
T ss_pred cccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----h---hhhc----c-c--c----ccc
Confidence 23468999999999877665 67899999999999999999998642 1 1111 0 0 0 011
Q ss_pred CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
...+ .++.+++.+||+.||++|||++||++
T Consensus 264 ~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 264 QRVS------SECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp SCCC------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCC------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122 24667888999999999999999976
No 278
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.1e-33 Score=316.56 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=171.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecC------Cee
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE------KAA 756 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~------~~~ 756 (966)
+.....+|+|++|.||+|+...+|..||||++.... ....+.+.+|+..+.+ ++|||||++++++... ...
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-MKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEecCCccccCCeE
Confidence 345567899999999999998999999999985432 1233457788888777 6999999999999754 568
Q ss_pred EEEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105 757 YLVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD 834 (966)
Q Consensus 757 ~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~ 834 (966)
|+||||+ +++|.++++ .+++..+..++.||++||+||| +.+|+||||||+||+++.+. .++++|||++....
T Consensus 110 ~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~--~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTA 183 (367)
T ss_dssp EEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTC--CEEECC--------
T ss_pred EEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCC--CEEEeecccccccc
Confidence 9999999 689999886 4899999999999999999999 45899999999999999654 57899999886532
Q ss_pred ---CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcc---c------
Q 002105 835 ---SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHL---D------ 901 (966)
Q Consensus 835 ---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~------ 901 (966)
....||+.|+|||++.+ ..++.++||||+||++|||+||+.||.+... .+.+..... ....... .
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~-~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILR-LVGTPGAELLKKISSES 261 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHH-HHCSCCHHHHTTCCCHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH-HhCCCCHHHHHHhhhHH
Confidence 33478999999999876 6789999999999999999999999976421 111111111 1100000 0
Q ss_pred --ccccccccCCCcchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 902 --TWVDPFIRGHVSSIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 902 --~~~d~~~~~~~~~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.++............ ....++.+++.+|++.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000000000000 00134677888999999999999999875
No 279
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.8e-33 Score=316.74 Aligned_cols=252 Identities=19% Similarity=0.260 Sum_probs=183.2
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCee------E
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAA------Y 757 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~------~ 757 (966)
.....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++...+.. +
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-MQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHh-cCCCCchhhhhheeccCCcccceeEE
Confidence 344557899999999999988999999999865322 223456778877777 6999999999999877654 9
Q ss_pred EEEEccCCCCHHHHHH-cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105 758 LVYEYIEGKELSEVLR-NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-- 834 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-- 834 (966)
+||||++ |+|.+++. .+++..+..++.|++.||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 124 lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~~~~~ 197 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADAE 197 (371)
T ss_dssp EEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTC--CEEECSTTCC------
T ss_pred EEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCC--CEEEEecCcccccccC
Confidence 9999998 68988886 48999999999999999999994 5899999999999999664 47899999886432
Q ss_pred -CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccC--cccc--------
Q 002105 835 -SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDC--HLDT-------- 902 (966)
Q Consensus 835 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~-------- 902 (966)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+... .+.+.......-... ....
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp --CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 34568999999999877 7789999999999999999999999976421 111111111000000 0000
Q ss_pred cccccccCCCcchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 903 WVDPFIRGHVSSIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 903 ~~d~~~~~~~~~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+............. ....++.+++.+|++.||++|||++|+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000000000000 01235677889999999999999999875
No 280
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.8e-33 Score=336.20 Aligned_cols=242 Identities=20% Similarity=0.305 Sum_probs=186.0
Q ss_pred ccccCCCCCccEEEEEEEecC---CcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 687 NLTSRGKKGVSSSYKVRSLAN---DMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~---~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
....+|+|+||.||+|+...+ +..||||++..... ...+.|.+|+..+.+ ++|||||+++|++. ++..|+||||
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~-~~~~~lv~E~ 471 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIVKLIGVIT-ENPVWIIMEL 471 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEe-cCceEEEEEc
Confidence 344579999999999997543 45688888754322 223567788887777 69999999999985 4668999999
Q ss_pred cCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC---
Q 002105 763 IEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS--- 835 (966)
Q Consensus 763 ~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~--- 835 (966)
+++|+|.++++ .++|..+..++.|+++||+|||. .+|+||||||+|||++.+ ..++++|||++.....
T Consensus 472 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~--~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp CTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEET--TEEEECCCCCCCSCCC---
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCC--CCEEEEecCCCeecCCCcc
Confidence 99999999996 38899999999999999999994 589999999999999865 4689999998864321
Q ss_pred ----CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105 836 ----KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG 910 (966)
Q Consensus 836 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 910 (966)
...+|+.|||||++.+..++.++|||||||++|||++ |+.||.+.. ...+...+.. .... ....
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--~~~~~~~i~~---~~~~------~~~~ 615 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIEN---GERL------PMPP 615 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHH---TCCC------CCCT
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHc---CCCC------CCCc
Confidence 2345778999999988899999999999999999997 999987532 1112122211 1110 1111
Q ss_pred CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105 911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR 952 (966)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~ 952 (966)
.++ .++.+++.+||+.||++|||+.||+++|++++.
T Consensus 616 ~~~------~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 616 NCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccc------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 222 256678889999999999999999999998543
No 281
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5e-33 Score=307.21 Aligned_cols=239 Identities=19% Similarity=0.281 Sum_probs=180.9
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcC-CCceeEEeeEEecCCeeEEEEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIM-HPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~-H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.....+|+|++|.||+++. .++..||||++.... ....+.+.+|+..+.++-. |||||++++++..++..++|||
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 108 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108 (313)
T ss_dssp EEEEEEEECCSSEEEEEEEC-TTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEecCCCCEEEEEEEc-CCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe
Confidence 44556679999999999998 678899999986432 2233567788888877422 6999999999999999999999
Q ss_pred ccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105 762 YIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---- 834 (966)
Q Consensus 762 y~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---- 834 (966)
+.+|+|.++++. +++..+..++.|+++||+|||. .+|+||||||+||++++ ..++++|||.+....
T Consensus 109 -~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~---~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 109 -CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp -CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET---TEEEECCCSSSCC------
T ss_pred -cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC---CeEEEeeccccccccCccc
Confidence 667899999963 8899999999999999999994 58999999999999974 468999999876421
Q ss_pred ----CCCcCCcccccccccCC-----------CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc
Q 002105 835 ----SKSINSSAYVAPETKES-----------KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH 899 (966)
Q Consensus 835 ----~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 899 (966)
....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||.......... ........
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~----~~~~~~~~ 257 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAIIDPNH 257 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH----HHHHCTTS
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH----HHHHhccc
Confidence 22368999999999865 468889999999999999999999997543221111 11111110
Q ss_pred ccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105 900 LDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT 946 (966)
Q Consensus 900 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~ 946 (966)
. .......+ .++.+++.+||+.||++||+++|+++.
T Consensus 258 ~-----~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 E-----IEFPDIPE------KDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp C-----CCCCCCSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c-----cCCcccch------HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 00111111 246677889999999999999999863
No 282
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.4e-33 Score=305.04 Aligned_cols=226 Identities=19% Similarity=0.170 Sum_probs=171.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.....+|+|++|.||+|++..+++.||||.+....... .+.|.+|+..+.+ ++|||||++++++..++..|+||||
T Consensus 34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~ 112 (286)
T 3uqc_A 34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSR-IDKPGVARVLDVVHTRAGGLVVAEW 112 (286)
T ss_dssp EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhc-CCCCCcceeeEEEEECCcEEEEEEe
Confidence 44456789999999999998889999999886443221 2567888888877 6999999999999999999999999
Q ss_pred cCCCCHHHHHHc-CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCCCCcCCc
Q 002105 763 IEGKELSEVLRN-LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDSKSINSS 841 (966)
Q Consensus 763 ~~~g~L~~~l~~-l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (966)
++||+|.++++. ....+..+++.|++.||+||| +.+|+||||||+||+++.++.. +++ ++
T Consensus 113 ~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~--kl~--------------~~ 173 (286)
T 3uqc_A 113 IRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDV--VLA--------------YP 173 (286)
T ss_dssp CCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCE--EEC--------------SC
T ss_pred cCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCE--EEE--------------ec
Confidence 999999999964 556678889999999999999 4589999999999999976553 333 34
Q ss_pred ccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc-cccCCCcchHHHHH
Q 002105 842 AYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP-FIRGHVSSIQNEIV 920 (966)
Q Consensus 842 ~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~ 920 (966)
+|++| ++.++|||||||++|||+||+.||.+........ . ... ........+ ......+ .
T Consensus 174 ~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--~---~~~-~~~~~~~~~~~~~~~~~------~ 234 (286)
T 3uqc_A 174 ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA--P---AER-DTAGQPIEPADIDRDIP------F 234 (286)
T ss_dssp CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE--E---CCB-CTTSCBCCHHHHCTTSC------H
T ss_pred cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH--H---HHH-HhccCCCChhhcccCCC------H
Confidence 56665 6889999999999999999999997642211000 0 000 000000000 0111111 2
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105 921 EIMNLALHCTAGDPTARPCASDVTKTLESCF 951 (966)
Q Consensus 921 ~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~ 951 (966)
++.+++.+||+.||++| |+.|+++.|++..
T Consensus 235 ~l~~li~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 235 QISAVAARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp HHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence 46678889999999999 9999999999843
No 283
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.2e-31 Score=296.61 Aligned_cols=294 Identities=24% Similarity=0.294 Sum_probs=197.8
Q ss_pred CCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCC
Q 002105 111 SLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASN 190 (966)
Q Consensus 111 ~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 190 (966)
+|+++++++|.++ .+|..-.++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|++++|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred cCCEEECCCCCcc-ccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 4555555555554 233333356777777777777666667777777777777777777766777777777777777777
Q ss_pred CCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeeccccc--ccCCcCCCCCCccceEeccccccCCCC
Q 002105 191 QLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLT--GQIPPSFGNLSNLRYLFLYQNKLTGSI 268 (966)
Q Consensus 191 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~ 268 (966)
+++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|++++ +
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l 187 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-I 187 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-C
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-c
Confidence 776 4555444 67778888888777655566777888888888888775 3566777777 78888888888775 4
Q ss_pred ChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCC
Q 002105 269 PKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQN 348 (966)
Q Consensus 269 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 348 (966)
|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..++
T Consensus 188 ~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 264 (332)
T 2ft3_A 188 PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLK 264 (332)
T ss_dssp CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCT
T ss_pred Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCc
Confidence 54443 57777777777777666677777777777777777777766667777777777777777776 5666677777
Q ss_pred CCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccC--CcCChhhcCCCcccEEc
Q 002105 349 NLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLS--GELSSEFTRLPLVYFLD 426 (966)
Q Consensus 349 ~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~Ld 426 (966)
+|+.|++++|.+++..+..|+... + -....+|+.|++++|.+. +..|..|..++.|+.++
T Consensus 265 ~L~~L~l~~N~l~~~~~~~~~~~~----------------~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~ 326 (332)
T 2ft3_A 265 LLQVVYLHTNNITKVGVNDFCPVG----------------F--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQ 326 (332)
T ss_dssp TCCEEECCSSCCCBCCTTSSSCSS----------------C--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEE
T ss_pred cCCEEECCCCCCCccChhHccccc----------------c--ccccccccceEeecCcccccccCcccccccchhhhhh
Confidence 777777777777765555554321 0 001345666666666665 45556666677777777
Q ss_pred ccCCC
Q 002105 427 ISGND 431 (966)
Q Consensus 427 Ls~N~ 431 (966)
+++|+
T Consensus 327 l~~n~ 331 (332)
T 2ft3_A 327 FGNYK 331 (332)
T ss_dssp C----
T ss_pred ccccc
Confidence 76663
No 284
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9e-33 Score=311.78 Aligned_cols=251 Identities=14% Similarity=0.199 Sum_probs=177.4
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc-----------ccchHHHHHHHHhhcCCCceeEEeeEEec-
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT-----------TSSFWPDVSQFGKLIMHPNIVRLHGVCRS- 752 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~-----------~~~~~~e~~~~~~~~~H~niv~l~g~~~~- 752 (966)
+.....+|+|++|.||+|+. .+|..||||++....... .+.+.+|+..+.+ ++|||||++++++..
T Consensus 24 y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH-FHHPNILGLRDIFVHF 101 (362)
T ss_dssp CEEEEEEEEETTEEEEEEEC-TTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEEEEC
T ss_pred eEEeEEeccCCCEEEEEEEC-CCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHh-CCCcCccceeeeEEec
Confidence 34455678999999999998 669999999986432221 1457788888877 699999999999854
Q ss_pred ----CCeeEEEEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEE
Q 002105 753 ----EKAAYLVYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRL 824 (966)
Q Consensus 753 ----~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~ 824 (966)
....|+||||++ |+|.+++. .+++..+..++.||+.||+|||. .+|+||||||+||+++.+. .+++
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~--~~kl 175 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNN--DITI 175 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTC--CEEE
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCC--CEEE
Confidence 346899999999 68888885 38999999999999999999994 5899999999999998654 5789
Q ss_pred eccccceec-----CCCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccC
Q 002105 825 SVPGLAYCT-----DSKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDC 898 (966)
Q Consensus 825 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 898 (966)
+|||.+... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+... .+........ ....
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~-~~~~ 253 (362)
T 3pg1_A 176 CDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-YNQLNKIVEV-VGTP 253 (362)
T ss_dssp CCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHH-HCCC
T ss_pred EecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH-cCCC
Confidence 999988542 223467899999998876 6789999999999999999999999976421 1111111110 0000
Q ss_pred cc-----------cccccccccCCCc-ch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 899 HL-----------DTWVDPFIRGHVS-SI----QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 899 ~~-----------~~~~d~~~~~~~~-~~----~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.. ..+.......... .. ......+.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00 0000000000000 00 001234677889999999999999999985
No 285
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1e-32 Score=304.28 Aligned_cols=250 Identities=29% Similarity=0.441 Sum_probs=160.2
Q ss_pred CcEEEccCCcccc--cCCCCccCCCCccEEEccC-CCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEc
Q 002105 350 LTVIDLSTNFLTG--KIPETLCDSGSLFKLILFS-NSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLD 426 (966)
Q Consensus 350 L~~L~Ls~N~l~~--~~p~~~~~~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~Ld 426 (966)
++.|+|++|.+++ .+|..+..+++|++|++++ |.+.+.+|..|..+++|++|+|++|++++.+|..|..+++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 3444444444444 3444444444444444442 444444555555555555555566655555555555666666666
Q ss_pred ccCCCCCCccCcchhccCCCcEecCCCCcCCccCCC-CcCcc-cccccccccccccccCCCcccCcCCCCEEEccCCccC
Q 002105 427 ISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPD-SFGSD-QLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLF 504 (966)
Q Consensus 427 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (966)
+++|++++.+|..+..+++|++|+|++|++++.+|. +..+. .|++|++++|++++.+|..+..++ |+.|++++|+++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 666666655565566666666666666666655555 33444 666677777777767777777666 777777777777
Q ss_pred CCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCCCc
Q 002105 505 GDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPSTGA 584 (966)
Q Consensus 505 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~ 584 (966)
+.+|..+..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|..+.
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 77777777777777777777777766655 66677777777777777777777777777777777777777777777766
Q ss_pred cCCCccccccCC-CCCCC
Q 002105 585 FLAINATAVAGN-DLCGG 601 (966)
Q Consensus 585 ~~~~~~~~~~gn-~lcg~ 601 (966)
+..+....+.+| .+||.
T Consensus 290 l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GGGSCGGGTCSSSEEEST
T ss_pred ccccChHHhcCCCCccCC
Confidence 666777777777 57764
No 286
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=4.5e-33 Score=307.39 Aligned_cols=232 Identities=20% Similarity=0.284 Sum_probs=178.0
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc------ccccchHHHHHHHHhhc---CCCceeEEeeEEecCCee
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT------ITTSSFWPDVSQFGKLI---MHPNIVRLHGVCRSEKAA 756 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~------~~~~~~~~e~~~~~~~~---~H~niv~l~g~~~~~~~~ 756 (966)
.....+|+|++|.||+|+...++..||||++..... .....+..|+..+.++. +|||||++++++..++..
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~ 113 (312)
T 2iwi_A 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGF 113 (312)
T ss_dssp EEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----C
T ss_pred EEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeE
Confidence 344567899999999999988999999999854432 12345677888777732 899999999999999999
Q ss_pred EEEEEc-cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 757 YLVYEY-IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 757 ~lv~Ey-~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
++|||| +++|+|.+++. .+++..+..++.|+++||+|||. .+|+||||||+||+++.+ ...++++|||.+..
T Consensus 114 ~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~-~~~~kl~dfg~~~~ 189 (312)
T 2iwi_A 114 MLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLR-RGCAKLIDFGSGAL 189 (312)
T ss_dssp EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETT-TTEEEECCCSSCEE
T ss_pred EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCC-CCeEEEEEcchhhh
Confidence 999999 89999999996 38999999999999999999995 489999999999999832 24688999998765
Q ss_pred cC----CCCcCCcccccccccCCCCCC-CcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc
Q 002105 833 TD----SKSINSSAYVAPETKESKDIT-EKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF 907 (966)
Q Consensus 833 ~~----~~~~~~~~y~aPE~~~~~~~~-~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 907 (966)
.. ....|++.|+|||++.+..+. .++|||||||++|||+||+.||... . +.... .. .
T Consensus 190 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~---~~~~~-----~~------~ 251 (312)
T 2iwi_A 190 LHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----Q---EILEA-----EL------H 251 (312)
T ss_dssp CCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H---HHHHT-----CC------C
T ss_pred cccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----H---HHhhh-----cc------C
Confidence 32 234688999999998776664 5899999999999999999998642 1 11110 00 0
Q ss_pred ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 908 IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
+....+ .++.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 252 FPAHVS------PDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CCTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CcccCC------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111122 24567888999999999999999986
No 287
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=2.7e-32 Score=306.78 Aligned_cols=251 Identities=17% Similarity=0.225 Sum_probs=182.7
Q ss_pred cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecC-----CeeEEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-----KAAYLV 759 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-----~~~~lv 759 (966)
.....+|+|++|.||+|+...+|..||||++..... .....+.+|+..+.+ ++|||||++++++..+ ...++|
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH-FKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHH-CCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHh-CcCCCcCCeeeeecccccCccceEEEE
Confidence 334557899999999999988899999999854322 223456788888777 6999999999998764 678999
Q ss_pred EEccCCCCHHHHHHc--CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 760 YEYIEGKELSEVLRN--LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 760 ~Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
|||++ |+|.+++.. +++..+..++.|++.||+||| +.+|+||||||+||+++.+. .++++|||.+....
T Consensus 93 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 93 QELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNC--DLKVCDFGLARIIDESA 166 (353)
T ss_dssp ECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTC--CEEECCCTTCEECC---
T ss_pred EeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCC--cEEEEeccccccccccc
Confidence 99998 699999864 899999999999999999999 45899999999999998654 57899999876422
Q ss_pred -------------CCCcCCcccccccccC-CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc-
Q 002105 835 -------------SKSINSSAYVAPETKE-SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH- 899 (966)
Q Consensus 835 -------------~~~~~~~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~- 899 (966)
....||+.|+|||++. +..++.++|||||||++|||++|+.||.+... .+.. ...........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~-~~~~~~~~~~~~ 244 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-RHQL-LLIFGIIGTPHS 244 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHHHHHCCCCS
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHH-HHHHHHhCCCch
Confidence 1236789999999865 47789999999999999999999999975421 1111 11111110000
Q ss_pred ---cccccccc-------ccCCC-cch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 900 ---LDTWVDPF-------IRGHV-SSI----QNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 900 ---~~~~~d~~-------~~~~~-~~~----~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
......+. +.... ... .....++.+++.+|++.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00000 000 011235667889999999999999999986
No 288
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.98 E-value=4.5e-32 Score=304.93 Aligned_cols=253 Identities=17% Similarity=0.215 Sum_probs=183.8
Q ss_pred ccccccCCCCCccEEEEEEEecCC-cEEEEEEEeccCcccccchHHHHHHHHhhcCCCc------eeEEeeEEecCCeeE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLAND-MQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPN------IVRLHGVCRSEKAAY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~-~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~n------iv~l~g~~~~~~~~~ 757 (966)
+.....+|+|++|.||+|+...++ ..||+|.+... ....+.+..|+..+.+ ++|++ ++.+++++...+..+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~-l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKK-IKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHH-HHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHH-HhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 344556789999999999987666 67888887532 2233456677777766 46655 999999999999999
Q ss_pred EEEEccCCCCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC---------------
Q 002105 758 LVYEYIEGKELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK--------------- 817 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~--------------- 817 (966)
+||||+ +|++.+++. .+++.++..++.||+.||+||| +.+|+||||||+||+++..
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 567777664 3889999999999999999999 5699999999999999542
Q ss_pred --CCceEEEeccccceecC---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHH
Q 002105 818 --DEPHLRLSVPGLAYCTD---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWAR 892 (966)
Q Consensus 818 --~~~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 892 (966)
....++++|||.+.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+.. ....
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~-~~~~ 252 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN-REHL-VMME 252 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHH
T ss_pred ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHH
Confidence 34568999999986532 345789999999999999999999999999999999999999975422 1111 1111
Q ss_pred HhhccC--------ccccc-cc-------------------ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002105 893 YCYSDC--------HLDTW-VD-------------------PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVT 944 (966)
Q Consensus 893 ~~~~~~--------~~~~~-~d-------------------~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~ 944 (966)
...... ....+ .. +...........+..++.+++.+|++.||++|||++|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 111000 00000 00 000000000112344678899999999999999999997
Q ss_pred H
Q 002105 945 K 945 (966)
Q Consensus 945 ~ 945 (966)
+
T Consensus 333 ~ 333 (355)
T 2eu9_A 333 L 333 (355)
T ss_dssp T
T ss_pred c
Confidence 4
No 289
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.98 E-value=1.8e-32 Score=308.12 Aligned_cols=248 Identities=19% Similarity=0.239 Sum_probs=181.4
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCe------eEE
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKA------AYL 758 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~------~~l 758 (966)
....+|+|++|.||+|+...+|..||||++..... ...+.+.+|+..+.+ ++|||||++++++...+. .|+
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~l 106 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-MQHENVIGLLDVFTPASSLRNFYDFYL 106 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHh-cCCCCcccHhheEecccccccceeEEE
Confidence 34457899999999999988999999999864322 123456778877777 699999999999987654 499
Q ss_pred EEEccCCCCHHHHHH-cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105 759 VYEYIEGKELSEVLR-NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--- 834 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--- 834 (966)
||||++ |+|.+++. .+++..+..++.||+.||+|||. .+|+||||||+||+++.+. .++++|||.+....
T Consensus 107 v~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~ 180 (353)
T 3coi_A 107 VMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADAEM 180 (353)
T ss_dssp EEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTC--CEEECSTTCTTC-----
T ss_pred Eecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCC--cEEEeecccccCCCCCc
Confidence 999998 68888775 58999999999999999999994 5899999999999999654 57899999886432
Q ss_pred CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhcc----------C-----
Q 002105 835 SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSD----------C----- 898 (966)
Q Consensus 835 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------~----- 898 (966)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+... .+.+.......-.. .
T Consensus 181 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 259 (353)
T 3coi_A 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDKAAKSY 259 (353)
T ss_dssp ---CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-HHHHHHHHHHHCBCCHHHHTTCSCHHHHHH
T ss_pred cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHHhhHHHHHH
Confidence 23467999999999876 6789999999999999999999999975421 11111111100000 0
Q ss_pred --cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 899 --HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 899 --~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
.......+......+ ....++.+++.+|++.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 260 IQSLPQTPRKDFTQLFP---RASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHTSCBCSSCCTTTTCT---TSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhCcCCCCccHHHhcC---CcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000011 11235667888999999999999999975
No 290
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.98 E-value=5e-33 Score=329.50 Aligned_cols=257 Identities=20% Similarity=0.260 Sum_probs=188.5
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEec------CCeeE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------EKAAY 757 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------~~~~~ 757 (966)
+.....+|.||+|.||+|+...+|..||||++... .....+.+.+|+..+.+ ++|||||++++++.. ++..+
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~v~~~~~~~~~~~~~~ 94 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKK-LNHPNVVSAREVPDGLQKLAPNDLPL 94 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHH-CCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHh-CCCCCCCceeeeecccccccCCCeEE
Confidence 34455679999999999999888999999987543 22233457788888877 699999999999865 67789
Q ss_pred EEEEccCCCCHHHHHHc------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC-ceEEEeccccc
Q 002105 758 LVYEYIEGKELSEVLRN------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE-PHLRLSVPGLA 830 (966)
Q Consensus 758 lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~-~~~~~~~~~~~ 830 (966)
+|||||++|+|.++++. +++..+..++.+++.||+|||. .+|+||||||+||+++.+.. ..++++|||.+
T Consensus 95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 99999999999999973 7889999999999999999994 58999999999999986543 44789999998
Q ss_pred eecC-----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc--
Q 002105 831 YCTD-----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW-- 903 (966)
Q Consensus 831 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 903 (966)
.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||..... ...|.............
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------CCSC
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchhhhhh
Confidence 6532 234689999999999999999999999999999999999999975321 11221111000000000
Q ss_pred --------ccccc--cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHHHhh
Q 002105 904 --------VDPFI--RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASD-----VTKTLESCF 951 (966)
Q Consensus 904 --------~d~~~--~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~-----v~~~L~~~~ 951 (966)
..... ..... .....++.+++.+|++.||++|||++| ..+.+++.+
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~--~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLS--GILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCC--GGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhccccccccccCCchhhc--hhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 00000 00111 122345677888999999999999988 456666633
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=8.5e-31 Score=291.81 Aligned_cols=292 Identities=24% Similarity=0.286 Sum_probs=202.2
Q ss_pred CCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceE
Q 002105 129 GSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKW 208 (966)
Q Consensus 129 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 208 (966)
+...+|+.+++++|.++ .+|..+. ++|++|+|++|.+.+..|..|.++++|++|++++|++++..|..++++++|++
T Consensus 30 ~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 30 GCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQK 106 (332)
T ss_dssp SCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCE
T ss_pred CCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCE
Confidence 33447899999999887 5666653 68888999998888777778888888888888888888877888888888888
Q ss_pred EEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccC--CCCChhhhcCCCCCEEEccCC
Q 002105 209 IYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLT--GSIPKSILGLKSLVSFDLSDN 286 (966)
Q Consensus 209 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~l~~l~~L~~L~Ls~N 286 (966)
|++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..+..+ +|+.|++++|
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 888888887 5565554 67777777777777655556777777777777777774 2455556555 6666666666
Q ss_pred cCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCC
Q 002105 287 YLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPE 366 (966)
Q Consensus 287 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~ 366 (966)
.+++ +|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++
T Consensus 183 ~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~----- 254 (332)
T 2ft3_A 183 KLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS----- 254 (332)
T ss_dssp BCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-----
T ss_pred CCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-----
Confidence 6664 343332 45666666666666555555666666666666666665554445555555555555555554
Q ss_pred CccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcC------CCcccEEcccCCCCC--CccCc
Q 002105 367 TLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTR------LPLVYFLDISGNDLS--GRIGE 438 (966)
Q Consensus 367 ~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~LdLs~N~l~--~~~~~ 438 (966)
.+|..+..+++|++|++++|++++..+..|.. .+.++.|++++|.+. +..|.
T Consensus 255 --------------------~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~ 314 (332)
T 2ft3_A 255 --------------------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPA 314 (332)
T ss_dssp --------------------BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGG
T ss_pred --------------------ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcc
Confidence 34445556666666666666666665555543 467899999999998 66777
Q ss_pred chhccCCCcEecCCCCc
Q 002105 439 QKWEMTSLQMLNLAGNN 455 (966)
Q Consensus 439 ~~~~l~~L~~L~Ls~N~ 455 (966)
.+..+++|+.+++++|+
T Consensus 315 ~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 315 TFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGTTBCCSTTEEC----
T ss_pred cccccchhhhhhccccc
Confidence 88899999999999985
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.2e-30 Score=290.27 Aligned_cols=293 Identities=24% Similarity=0.306 Sum_probs=144.3
Q ss_pred CCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEc
Q 002105 86 HVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDL 163 (966)
Q Consensus 86 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 163 (966)
+++.++++++.+. .+|..+. +.|++|+|++|.+++..+ ++.+++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4666777777666 5554332 445555555555554222 344555555555555555444555555555555555
Q ss_pred cCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccc-
Q 002105 164 GGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTG- 242 (966)
Q Consensus 164 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~- 242 (966)
++|.+. .+|..+. ++|++|++++|.+.+..+. .+.++++|++|++++|.+..
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~------------------------~~~~l~~L~~L~l~~n~l~~~ 160 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKS------------------------VFNGLNQMIVVELGTNPLKSS 160 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHH------------------------HHTTCTTCCEEECCSSCCCGG
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHh------------------------HhcCCccccEEECCCCcCCcc
Confidence 555444 2333222 3444444444444443333 34444444444444444431
Q ss_pred -cCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCC
Q 002105 243 -QIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLA 321 (966)
Q Consensus 243 -~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 321 (966)
..+..+.++++|++|++++|+++. +|..+. ++|++|++++|.+++..|..+..+++|+.|++++|.+++..+..+.
T Consensus 161 ~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 161 GIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp GBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred CcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 334444445555555555554442 232222 4555555555555554455555555555555555555544444555
Q ss_pred CCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCcee
Q 002105 322 SMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRV 401 (966)
Q Consensus 322 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 401 (966)
.+++|+.|++++|+++ .+|..+..+++|+.|++++|.+++..+..|+... ......+++.|
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l 298 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGV 298 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEE
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccce
Confidence 5555555555555555 4455555555555555555555544444443210 00112445555
Q ss_pred eccccccCC--cCChhhcCCCcccEEcccCCC
Q 002105 402 RLQNNRLSG--ELSSEFTRLPLVYFLDISGND 431 (966)
Q Consensus 402 ~L~~N~l~~--~~~~~~~~l~~L~~LdLs~N~ 431 (966)
++++|.+.. ..|..|..+..++.++|++|+
T Consensus 299 ~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 299 SLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred EeecCcccccccCccccccccceeEEEecccC
Confidence 666665542 445566666666666666663
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.5e-30 Score=289.47 Aligned_cols=290 Identities=24% Similarity=0.297 Sum_probs=175.2
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 211 (966)
.+|++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|++++..|..++.+++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35566666666655 3444332 45666666666665555555556666666666666655555555566666666666
Q ss_pred cCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCC--CCChhhhcCCCCCEEEccCCcCc
Q 002105 212 GYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTG--SIPKSILGLKSLVSFDLSDNYLS 289 (966)
Q Consensus 212 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~ 289 (966)
++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+.. ..+..+.++++|++|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 666555 3444332 456666666666665555555666666666666665532 34444555555555555555544
Q ss_pred ccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCcc
Q 002105 290 GEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLC 369 (966)
Q Consensus 290 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 369 (966)
. +|..+. ++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+.
T Consensus 185 ------------------------~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 185 ------------------------T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp ------------------------S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred ------------------------c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 2 232222 4555666666666555555556666666666666666655555566
Q ss_pred CCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcC------CCcccEEcccCCCCCC--ccCcchh
Q 002105 370 DSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTR------LPLVYFLDISGNDLSG--RIGEQKW 441 (966)
Q Consensus 370 ~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~LdLs~N~l~~--~~~~~~~ 441 (966)
.+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..|.. .+.++.|++++|.+.. ..|..+.
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 6666666666666665 55666777777777777777777776666643 4788999999999874 5567788
Q ss_pred ccCCCcEecCCCCc
Q 002105 442 EMTSLQMLNLAGNN 455 (966)
Q Consensus 442 ~l~~L~~L~Ls~N~ 455 (966)
.+.+++.++|++|+
T Consensus 317 ~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 317 CVYVRAAVQLGNYK 330 (330)
T ss_dssp TCCCGGGEEC----
T ss_pred cccceeEEEecccC
Confidence 89999999999985
No 294
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.7e-32 Score=333.06 Aligned_cols=234 Identities=19% Similarity=0.268 Sum_probs=179.5
Q ss_pred cccccCCCCCccEEEEEEEec-CCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCe-----eEE
Q 002105 686 ENLTSRGKKGVSSSYKVRSLA-NDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKA-----AYL 758 (966)
Q Consensus 686 ~~~~~~g~~g~~~vy~~~~~~-~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~-----~~l 758 (966)
.....+|+||+|.||++++.. +|+.||||++..... .....+.+|+..+.+ ++|||||++++++...+. .|+
T Consensus 83 ~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~~~~~~l 161 (681)
T 2pzi_A 83 EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE-VVHPSIVQIFNFVEHTDRHGDPVGYI 161 (681)
T ss_dssp EEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGG-CCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHh-cCCCCcCeEeeeEeecCCCCCceeEE
Confidence 344557899999999999865 788999998754322 223456777777776 799999999999987655 799
Q ss_pred EEEccCCCCHHHHHH-cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--C
Q 002105 759 VYEYIEGKELSEVLR-NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--S 835 (966)
Q Consensus 759 v~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--~ 835 (966)
|||||+||+|.+++. .++|.++..++.||++||+|||. .+||||||||+||+++.+ .++++|||++.... .
T Consensus 162 v~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~~~~~ 235 (681)
T 2pzi_A 162 VMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSFG 235 (681)
T ss_dssp EEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS---CEEECCCTTCEETTCCS
T ss_pred EEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC---cEEEEecccchhcccCC
Confidence 999999999999886 58999999999999999999994 589999999999999864 67999999987543 3
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI 915 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 915 (966)
...||++|||||++.+. ++.++|||||||++|||++|..|+...... .. . .. ...
T Consensus 236 ~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------------~~---~-----~~-~~~ 290 (681)
T 2pzi_A 236 YLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD---------------GL---P-----ED-DPV 290 (681)
T ss_dssp CCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS---------------SC---C-----TT-CHH
T ss_pred ccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc---------------cc---c-----cc-ccc
Confidence 45689999999998765 488999999999999999999887542100 00 0 00 000
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHHhh
Q 002105 916 QNEIVEIMNLALHCTAGDPTARPC-ASDVTKTLESCF 951 (966)
Q Consensus 916 ~~~~~~~~~l~~~C~~~~P~~RPt-~~~v~~~L~~~~ 951 (966)
......+.+++.+|++.||++||+ ++++...|...+
T Consensus 291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 112235677889999999999995 666777776543
No 295
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=9.3e-32 Score=294.93 Aligned_cols=221 Identities=20% Similarity=0.288 Sum_probs=168.1
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEccCC
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEYIEG 765 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey~~~ 765 (966)
.+|+|++|.||++....++..||+|++.. ...+.+|+..+.+..+|||||++++++.. ++..++||||+++
T Consensus 25 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 25 VLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred ccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 36899999999999988999999999853 24567788887777899999999999976 6778999999999
Q ss_pred CCHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecCCCCcC
Q 002105 766 KELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTDSKSIN 839 (966)
Q Consensus 766 g~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~~~~~~ 839 (966)
|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+||+++.+. ...++++|||.+....
T Consensus 100 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----- 171 (299)
T 3m2w_A 100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----- 171 (299)
T ss_dssp CBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-----
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-----
Confidence 999999963 889999999999999999999 45899999999999999643 4568999999875322
Q ss_pred CcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc-cccCCCcchHHH
Q 002105 840 SSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP-FIRGHVSSIQNE 918 (966)
Q Consensus 840 ~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~ 918 (966)
+..++.++|||||||++|||+||+.||....... ................| ......
T Consensus 172 -----------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------ 229 (299)
T 3m2w_A 172 -----------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----ISPGMKTRIRMGQYEFPNPEWSEV------ 229 (299)
T ss_dssp -----------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCCSSCTTCCSSCHHHHTTS------
T ss_pred -----------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-----hhHHHHHHHhhccccCCchhcccC------
Confidence 3457889999999999999999999996532110 00000000000000000 000111
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105 919 IVEIMNLALHCTAGDPTARPCASDVTK 945 (966)
Q Consensus 919 ~~~~~~l~~~C~~~~P~~RPt~~~v~~ 945 (966)
..++.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 230 SEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 235667888999999999999999986
No 296
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=9.6e-31 Score=299.93 Aligned_cols=226 Identities=15% Similarity=0.139 Sum_probs=161.0
Q ss_pred ccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCC-Cce---------------eE----
Q 002105 689 TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMH-PNI---------------VR---- 745 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H-~ni---------------v~---- 745 (966)
..+|+||||.||+|++..+|..||||++....... .+.+.+|+..+.. ++| +|. +.
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRL-LRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGG-STTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHh-hccCCCHHHHHHhcccccchhhcccCCC
Confidence 34789999999999998899999999886332222 3456666666555 566 221 11
Q ss_pred --EeeEEec-----CCeeEEEEEccCCCCHHHHHH----------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCC
Q 002105 746 --LHGVCRS-----EKAAYLVYEYIEGKELSEVLR----------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVS 808 (966)
Q Consensus 746 --l~g~~~~-----~~~~~lv~Ey~~~g~L~~~l~----------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk 808 (966)
+..++.. ....+++|+++ +|+|.++++ .++|..+..++.||++||+||| +.+|||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcc
Confidence 1111111 12356777765 589999884 2678899999999999999999 4589999999
Q ss_pred CCcEEEcCCCCceEEEeccccceec---CCCCcCCccccccccc----------CCCCCCCcchHHHHHHHHHHHHcCCC
Q 002105 809 PGKVIVDGKDEPHLRLSVPGLAYCT---DSKSINSSAYVAPETK----------ESKDITEKGDIYGFGLILIDLLTGKS 875 (966)
Q Consensus 809 ~~Nill~~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~----------~~~~~~~~~Dv~S~Gv~l~el~tg~~ 875 (966)
|+|||++.+.. ++++|||++... .....| +.|||||++ ....++.++|||||||++|||+||+.
T Consensus 239 p~NILl~~~~~--~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 239 PVDIVLDQRGG--VFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp GGGEEECTTCC--EEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cceEEEecCCe--EEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999997655 799999997643 234467 999999998 66678999999999999999999999
Q ss_pred CCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002105 876 PADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVT 944 (966)
Q Consensus 876 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~ 944 (966)
||...... + . .+..+... .... .++.+++.+||+.||++||++.|++
T Consensus 316 Pf~~~~~~-~-------------~----~~~~~~~~-~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 316 PNTDDAAL-G-------------G----SEWIFRSC-KNIP---QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCCTTGGG-S-------------C----SGGGGSSC-CCCC---HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCCcchh-h-------------h----HHHHHhhc-ccCC---HHHHHHHHHHccCChhhCcCHHHHH
Confidence 99753210 0 0 11111100 0111 2466778899999999999977664
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.5e-34 Score=334.53 Aligned_cols=378 Identities=22% Similarity=0.201 Sum_probs=208.9
Q ss_pred CCCCEEEccCCCCcccCCcc-cccCCcceEEEccCCCCCC----CCCcCccCCCCCCEEEeecccccccCCcCC-CCCC-
Q 002105 180 TSLQIFTLASNQLIGSIPRE-IGQLRNLKWIYLGYNNLSG----EIPKEIGDLTSLNHLDLVYNNLTGQIPPSF-GNLS- 252 (966)
Q Consensus 180 ~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~- 252 (966)
++|++|++++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|++++|.+....+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34566666666654332222 4455566666666666542 223444555556666666655543222111 1222
Q ss_pred ---ccceEeccccccCC----CCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002105 253 ---NLRYLFLYQNKLTG----SIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPK 325 (966)
Q Consensus 253 ---~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 325 (966)
+|++|++++|+++. .++..+..+++|++|++++|.+++..+..+... .....++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~-------------------l~~~~~~ 143 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG-------------------LLDPQCR 143 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH-------------------HTSTTCC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH-------------------HhcCCCc
Confidence 45555555555542 234445555555555555555543322222110 0112334
Q ss_pred ccEEEccCCcCccc----CCccccCCCCCcEEEccCCcccccCCCCcc-----CCCCccEEEccCCCCCCC----CCCcc
Q 002105 326 LQVLQLWSNQFSGE----IPSNLGKQNNLTVIDLSTNFLTGKIPETLC-----DSGSLFKLILFSNSLEGK----IPNSL 392 (966)
Q Consensus 326 L~~L~L~~N~l~~~----~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-----~~~~L~~L~l~~N~l~~~----~p~~~ 392 (966)
|++|++++|.+++. ++..+..+++|+.|++++|.++...+..+. ..++|+.|++++|.+++. ++..+
T Consensus 144 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 223 (461)
T 1z7x_W 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIV 223 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHH
T ss_pred ceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHH
Confidence 55555555555432 233344445555555555555433222222 133555566666655543 35555
Q ss_pred ccCccCceeeccccccCCcC-----ChhhcCCCcccEEcccCCCCCCc----cCcchhccCCCcEecCCCCcCCccCCCC
Q 002105 393 STCKSLRRVRLQNNRLSGEL-----SSEFTRLPLVYFLDISGNDLSGR----IGEQKWEMTSLQMLNLAGNNFSGKLPDS 463 (966)
Q Consensus 393 ~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~LdLs~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 463 (966)
..+++|++|++++|++++.. +..+..+++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..
T Consensus 224 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 303 (461)
T 1z7x_W 224 ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 303 (461)
T ss_dssp HHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHH
T ss_pred HhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHH
Confidence 66777777777777766532 22233577778888888877754 4555566777888888877775432221
Q ss_pred c------Cccccccccccccccccc----CCCcccCcCCCCEEEccCCccCCCChhhccc-----cccccccccCCceec
Q 002105 464 F------GSDQLENLDLSENRFSGT----IPRSFGRLSELMQLKISRNKLFGDIPEELSS-----CKKLVSLDLSNNQLS 528 (966)
Q Consensus 464 ~------~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~ 528 (966)
+ ..++|++|++++|.+++. ++..+..+++|+.|+|++|++.+..+..+.. .++|+.|+|++|.++
T Consensus 304 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 304 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 1 124677777777777654 3455666777888888888776655554443 567888888888877
Q ss_pred c----ccCccCCCCCCCcEEeCCCCcCcccCCcccc-----cCCCCCeeeCcCCccc
Q 002105 529 G----HIPASLSEMPVLGQLDLSENQLSGKIPQTLG-----RVASLVQVNISHNHFH 576 (966)
Q Consensus 529 ~----~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~-----~l~~L~~l~ls~N~l~ 576 (966)
+ .+|..+..+++|+.|||++|++++.-...+. ....|+.|++.++.+.
T Consensus 384 ~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 384 DSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp HHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred hhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 5 6677777777788888888877754111111 1235666666666554
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=6.1e-34 Score=332.46 Aligned_cols=356 Identities=19% Similarity=0.203 Sum_probs=162.0
Q ss_pred CEEEEEcCCCCcccccccc-ccCCCCCCEEEcCCCCCccc----cChhhhhcCCCCcEEECCCCCCCCCCC---CCCCC-
Q 002105 62 HVNAIELSAKNISGKISSS-IFHLPHVESINLSSNQLSGE----IPSDIFSSSNSLRFLNLSNNNFTGPVP---IGSLS- 132 (966)
Q Consensus 62 ~v~~L~L~~~~l~~~~~~~-~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~l~- 132 (966)
+++.|||++++++...... +..+++|++|+|++|.+.+. ++ ..+..+++|++|+|++|.+++..+ ...+.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~-~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDIS-SALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHH-HHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHH-HHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3455666666555433222 44555666666666655421 12 223334555555555555543111 01122
Q ss_pred ---CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccc-----cCC
Q 002105 133 ---RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIG-----QLR 204 (966)
Q Consensus 133 ---~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-----~l~ 204 (966)
+|++|+|++|.++..- ...+|..+..+++|++|++++|.+....+..+. ..+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~--------------------~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAG--------------------CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp TTCCCCEEECTTSCCBGGG--------------------HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCceeEEEccCCCCCHHH--------------------HHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 3555555555444200 012334444444444444444444332222211 123
Q ss_pred cceEEEccCCCCCCCC----CcCccCCCCCCEEEeecccccccCCcCCC-----CCCccceEeccccccCCC----CChh
Q 002105 205 NLKWIYLGYNNLSGEI----PKEIGDLTSLNHLDLVYNNLTGQIPPSFG-----NLSNLRYLFLYQNKLTGS----IPKS 271 (966)
Q Consensus 205 ~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~n~l~~~----~p~~ 271 (966)
+|++|++++|.+++.. +..+..+++|++|++++|.+....+..+. .+++|++|++++|.+++. ++..
T Consensus 143 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 4555555555544321 23344445555555555555432222221 234566666666655542 3444
Q ss_pred hhcCCCCCEEEccCCcCcccCc-----hhhcCCCCCceecccCCCCCCC----CCCCCCCCCCccEEEccCCcCcccCCc
Q 002105 272 ILGLKSLVSFDLSDNYLSGEIP-----EEVIQLQNLEILHLFSNNFTGK----IPSSLASMPKLQVLQLWSNQFSGEIPS 342 (966)
Q Consensus 272 l~~l~~L~~L~Ls~N~l~~~~p-----~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~ 342 (966)
+..+++|++|++++|.+++... ..+..+++|+.|++++|.++.. ++..+..+++|++|++++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 5555666666666665543221 1111344455555555544432 233333344455555555444332221
Q ss_pred cccC-----CCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhc
Q 002105 343 NLGK-----QNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFT 417 (966)
Q Consensus 343 ~~~~-----~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 417 (966)
.+.. .++|+.|++++|.+++.... .++..+..+++|++|++++|++++..+..+.
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCS--------------------HFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHH--------------------HHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHH--------------------HHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 1111 13444444444444322000 0233344455666666666665544333332
Q ss_pred C-----CCcccEEcccCCCCCC----ccCcchhccCCCcEecCCCCcCCc
Q 002105 418 R-----LPLVYFLDISGNDLSG----RIGEQKWEMTSLQMLNLAGNNFSG 458 (966)
Q Consensus 418 ~-----l~~L~~LdLs~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~ 458 (966)
. .++|++|++++|.+++ .++..+..+++|++|++++|++++
T Consensus 363 ~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 363 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 1 4566666666666664 455555566666666666666654
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=285.41 Aligned_cols=285 Identities=21% Similarity=0.239 Sum_probs=204.3
Q ss_pred CCCCCCCCCcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCC
Q 002105 42 NWDSSVTFCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNN 121 (966)
Q Consensus 42 ~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 121 (966)
.|.....+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|+++ .+|...+..+++|++|+|++|.
T Consensus 22 ~~~~~~~~C~~~~~-c~---------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CK---------GSSGSLN-SIPSGLT--EAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EE---------CCSTTCS-SCCTTCC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-ee---------CCCCCcc-ccccccc--ccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCc
Confidence 34444578999988 74 4566666 4455554 48999999999998 5777667777889999999988
Q ss_pred CCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCC-cCCCCCCCCCEEEccCCC-CcccCC
Q 002105 122 FTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIP-LSISNITSLQIFTLASNQ-LIGSIP 197 (966)
Q Consensus 122 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~-l~~~~p 197 (966)
+++..+ ++.+++|++|+|++|++++..+..+..+++|++|+|++|.+.+..+ ..+.++++|++|++++|. +....+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 886443 6788888888888888886555558888888888888888875433 367888888888888884 666666
Q ss_pred cccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhh---c
Q 002105 198 REIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSIL---G 274 (966)
Q Consensus 198 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~---~ 274 (966)
..++.+++|++|++++|.+++..|..+..+++|++|++++|.+....+..+..+++|++|++++|++++..+..+. .
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 7788888888888888888877788888888888888888887643333345577888888888888765544332 3
Q ss_pred CCCCCEEEccCCcCcc----cCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccC
Q 002105 275 LKSLVSFDLSDNYLSG----EIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEI 340 (966)
Q Consensus 275 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 340 (966)
...++.++++++.+++ .+|..+..+++|+.|++++|+++...+..|..+++|++|++++|.+.+..
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 4567777777777765 35666777777777777777777433333467777777777777766544
No 300
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=5.5e-31 Score=293.86 Aligned_cols=190 Identities=13% Similarity=0.088 Sum_probs=150.7
Q ss_pred ccccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc--------cccchHHHHHHHHhhc--------CCCceeEE
Q 002105 683 TTEENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI--------TTSSFWPDVSQFGKLI--------MHPNIVRL 746 (966)
Q Consensus 683 ~~~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~--------~~~~~~~e~~~~~~~~--------~H~niv~l 746 (966)
..+.....+|+|++|.||+|+. +|..||||++...... ..+.+.+|+..+.++- +|||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 3345556789999999999986 7899999999754321 1245778887776632 37777777
Q ss_pred eeEEe------------------------------cCCeeEEEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHH
Q 002105 747 HGVCR------------------------------SEKAAYLVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFL 794 (966)
Q Consensus 747 ~g~~~------------------------------~~~~~~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yL 794 (966)
.+++. .++..|+|||||++|++.+.+. .+++.....++.||+.||+||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 77643 2678999999999997665553 479999999999999999999
Q ss_pred h-hcCCCCeEeecCCCCcEEEcCCC------------------CceEEEeccccceec-CCCCcCCcccccccccCCCCC
Q 002105 795 H-FHCSPSVVAGDVSPGKVIVDGKD------------------EPHLRLSVPGLAYCT-DSKSINSSAYVAPETKESKDI 854 (966)
Q Consensus 795 H-~~~~~~iiHrDlk~~Nill~~~~------------------~~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~ 854 (966)
| .. +||||||||+|||++.+. ...++++|||++... .....||+.|||||++.+..
T Consensus 178 H~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~- 253 (336)
T 2vuw_A 178 EASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG- 253 (336)
T ss_dssp HHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-
T ss_pred HHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-
Confidence 9 55 799999999999998764 137899999998753 33457999999999998776
Q ss_pred CCcchHHHHHHH-HHHHHcCCCCCC
Q 002105 855 TEKGDIYGFGLI-LIDLLTGKSPAD 878 (966)
Q Consensus 855 ~~~~Dv~S~Gv~-l~el~tg~~p~~ 878 (966)
+.++||||+|++ .+++.+|..||.
T Consensus 254 ~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 254 DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred ccceehhhhhCCCCcccccccCCCc
Confidence 889999998777 778899999974
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=271.70 Aligned_cols=251 Identities=21% Similarity=0.161 Sum_probs=127.7
Q ss_pred CCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCE
Q 002105 83 HLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKV 160 (966)
Q Consensus 83 ~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 160 (966)
.++.....|+++|.++ .+|..++ ++|++|+|++|.+++..+ +..+++|++|+|++|.+++..|..|.++++|++
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 3445556777777776 6776443 355555555555554222 344555555555555555444444555555555
Q ss_pred EEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCC-cCccCCCCCCEEEeecc-
Q 002105 161 LDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIP-KEIGDLTSLNHLDLVYN- 238 (966)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N- 238 (966)
|+|++|.+++.. +..++++++|++|++++|.+++..+ ..+.++++|++|++++|
T Consensus 105 L~Ls~n~l~~~~------------------------~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 105 LDLSYNYLSNLS------------------------SSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp EECCSSCCSSCC------------------------HHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred EECCCCcCCcCC------------------------HhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc
Confidence 555555444333 3334444555555555554442222 24455555555555555
Q ss_pred cccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCC
Q 002105 239 NLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPS 318 (966)
Q Consensus 239 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 318 (966)
.+....|..|+++++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|.+++..+.
T Consensus 161 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 240 (353)
T 2z80_A 161 TFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFS 240 (353)
T ss_dssp SCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC
T ss_pred cccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccc
Confidence 24433444455555555555555555554455555555555555555555432222233355555555555555543332
Q ss_pred CC---CCCCCccEEEccCCcCcc----cCCccccCCCCCcEEEccCCccc
Q 002105 319 SL---ASMPKLQVLQLWSNQFSG----EIPSNLGKQNNLTVIDLSTNFLT 361 (966)
Q Consensus 319 ~l---~~l~~L~~L~L~~N~l~~----~~p~~~~~~~~L~~L~Ls~N~l~ 361 (966)
.+ ...+.++.++++++.+.+ .+|..+..+++|+.|++++|.++
T Consensus 241 ~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 241 ELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp ------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 22 224456666666666654 24555566666666666666665
No 302
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.6e-28 Score=267.40 Aligned_cols=225 Identities=22% Similarity=0.297 Sum_probs=150.6
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 211 (966)
.++++|+|++|.++ .+|..+..+++|++|+|++|.+. .+|..++++++|++|++++|.++ .+|..++++++|++|++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 34555555555554 45556666666666666666666 56666666666666666666666 55666666666666666
Q ss_pred cCCCCCCCCCcCcc---------CCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEE
Q 002105 212 GYNNLSGEIPKEIG---------DLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFD 282 (966)
Q Consensus 212 ~~N~l~~~~p~~l~---------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 282 (966)
++|++.+.+|..++ ++++|++|++++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 66666666666554 4777777777777777 567777777777777777777764 455677777777777
Q ss_pred ccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCccc
Q 002105 283 LSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLT 361 (966)
Q Consensus 283 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~ 361 (966)
+++|.+.+.+|..+..+++|+.|++++|++.+.+|..+.++++|+.|+|++|.+.+.+|..++.+++|+.+++..|.+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 7777777677766667777777777776666666666666777777777776666666766666666666666655443
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.7e-31 Score=322.06 Aligned_cols=325 Identities=16% Similarity=0.067 Sum_probs=142.4
Q ss_pred CCCCcCEEEccCCCCccc----CCcCCCCCCCCCEEEccCCCCc----ccCCcccccCCcceEEEccCCCCCCCCCcCcc
Q 002105 154 SFSGLKVLDLGGNVLVGE----IPLSISNITSLQIFTLASNQLI----GSIPREIGQLRNLKWIYLGYNNLSGEIPKEIG 225 (966)
Q Consensus 154 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 225 (966)
.+++|++|+|++|.+++. ++..+.++++|++|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 445555555555544332 2222334455555555555544 1223333444555555555555443 344445
Q ss_pred CCCCCCEEEeeccccc---ccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCc-hhhcCCCC
Q 002105 226 DLTSLNHLDLVYNNLT---GQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIP-EEVIQLQN 301 (966)
Q Consensus 226 ~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 301 (966)
++++|++|+++..... +..+..+..+++|+.|+++++. .+.+|..+..+++|++|++++|.+++... ..+..+++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 5555555555432211 1222334444555555554432 22344444455555555555555443222 22344555
Q ss_pred CceecccCCCCC-CCCCCCCCCCCCccEEEcc-----------CCcCcccC-CccccCCCCCcEEEccCCcccccCCCCc
Q 002105 302 LEILHLFSNNFT-GKIPSSLASMPKLQVLQLW-----------SNQFSGEI-PSNLGKQNNLTVIDLSTNFLTGKIPETL 368 (966)
Q Consensus 302 L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~-----------~N~l~~~~-p~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 368 (966)
|+.|+++ +.+. +.++..+..+++|++|+++ .|.+++.. +.....+++|+.|+++.|.+++..+..+
T Consensus 320 L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l 398 (592)
T 3ogk_B 320 LEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESI 398 (592)
T ss_dssp CCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHH
T ss_pred CCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHH
Confidence 5555554 2221 1112222334455555555 23333221 1112234555555555555544433333
Q ss_pred cC-CCCccEEEcc----CCCCCCC-----CCCccccCccCceeecccc--ccCCcCChhhc-CCCcccEEcccCCCCCC-
Q 002105 369 CD-SGSLFKLILF----SNSLEGK-----IPNSLSTCKSLRRVRLQNN--RLSGELSSEFT-RLPLVYFLDISGNDLSG- 434 (966)
Q Consensus 369 ~~-~~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~LdLs~N~l~~- 434 (966)
.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++.....+. .+++|++|++++|.+++
T Consensus 399 ~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 478 (592)
T 3ogk_B 399 GTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE 478 (592)
T ss_dssp HHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH
T ss_pred HhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH
Confidence 32 4455555553 3444432 2222344555555555432 23333332222 25555555555555554
Q ss_pred ccCcchhccCCCcEecCCCCcCCccC-CC-CcCcccccccccccccccc
Q 002105 435 RIGEQKWEMTSLQMLNLAGNNFSGKL-PD-SFGSDQLENLDLSENRFSG 481 (966)
Q Consensus 435 ~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~-~~~~~~L~~L~Ls~N~l~~ 481 (966)
.++..+..+++|++|+|++|.+++.. +. ...+++|++|++++|++++
T Consensus 479 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 479 GLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 22333344555555555555554321 11 1134455555555555554
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=6.6e-28 Score=265.18 Aligned_cols=248 Identities=25% Similarity=0.228 Sum_probs=121.8
Q ss_pred cEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcc--cCCcCCCCCCCCCEEEccCC
Q 002105 113 RFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVG--EIPLSISNITSLQIFTLASN 190 (966)
Q Consensus 113 ~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~n 190 (966)
+.++++++.++. +|.+..++|++|+|++|.++...+..|..+++|++|+|++|.+.. ..|..+..+++|++|++++|
T Consensus 10 ~~l~c~~~~l~~-ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp TEEECCSSCCSS-CCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred CEEEcCCCCccc-CCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 456666666652 333334566667776666664444445666666666666666552 22344445555555555555
Q ss_pred CCcccCCcccccCCcceEEEccCCCCCCCCC-cCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC
Q 002105 191 QLIGSIPREIGQLRNLKWIYLGYNNLSGEIP-KEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP 269 (966)
Q Consensus 191 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 269 (966)
.+.. +|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..|..|.++++|++|++++|.+++.
T Consensus 89 ~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 165 (306)
T 2z66_A 89 GVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN-- 165 (306)
T ss_dssp SEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG--
T ss_pred cccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc--
Confidence 5542 34445555555555555555543322 3344444444444444444444444444444444444444444330
Q ss_pred hhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCC
Q 002105 270 KSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNN 349 (966)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 349 (966)
..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++
T Consensus 166 ---------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 166 ---------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp ---------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred ---------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 23444444444444444444444444444444445555555555444443334444444
Q ss_pred CcEEEccCCcccccCCCCccCCC-CccEEEccCCCCC
Q 002105 350 LTVIDLSTNFLTGKIPETLCDSG-SLFKLILFSNSLE 385 (966)
Q Consensus 350 L~~L~Ls~N~l~~~~p~~~~~~~-~L~~L~l~~N~l~ 385 (966)
|+.|++++|.+++..|..+..++ +|+.|++++|.++
T Consensus 225 L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 55555555544444444443332 3444444444433
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=5.4e-31 Score=317.68 Aligned_cols=375 Identities=14% Similarity=0.093 Sum_probs=202.9
Q ss_pred CCCCCCEEEccCCCCcccCCcccccC--CcceEEEccCCC-CCC-CCCcCccCCCCCCEEEeeccccccc----CCcCCC
Q 002105 178 NITSLQIFTLASNQLIGSIPREIGQL--RNLKWIYLGYNN-LSG-EIPKEIGDLTSLNHLDLVYNNLTGQ----IPPSFG 249 (966)
Q Consensus 178 ~l~~L~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~ 249 (966)
++++|++|+|++|.+++..+..+... ++|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45555555555555554444444442 236666665554 110 0111123556666666666665443 222334
Q ss_pred CCCccceEeccccccCCC----CChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCC---CCCCCCCCC
Q 002105 250 NLSNLRYLFLYQNKLTGS----IPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFT---GKIPSSLAS 322 (966)
Q Consensus 250 ~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~ 322 (966)
++++|++|++++|.+++. ++..+.++++|++|++++|.+.+ +|..+..+++|+.|+++..... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 556666666666666522 23334566677777777766664 4566666677777777643222 223345566
Q ss_pred CCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCC-CCccCCCCccEEEccCCCCCCCCCCccccCccCcee
Q 002105 323 MPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIP-ETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRV 401 (966)
Q Consensus 323 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 401 (966)
+++|+.|+++++. .+.+|..+..+++|+.|+|++|.+++... ..+..+++|+.|+++++...+.++.....+++|++|
T Consensus 269 ~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 269 PRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp CTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEE
T ss_pred cccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEE
Confidence 6777777776643 23455566666777777777776554322 223455666666666322222233333456667777
Q ss_pred eccc-----------cccCCcC-ChhhcCCCcccEEcccCCCCCCccCcchhc-cCCCcEecCC----CCcCCccC----
Q 002105 402 RLQN-----------NRLSGEL-SSEFTRLPLVYFLDISGNDLSGRIGEQKWE-MTSLQMLNLA----GNNFSGKL---- 460 (966)
Q Consensus 402 ~L~~-----------N~l~~~~-~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~~---- 460 (966)
++++ |.+++.. +..+..+++|++|+++.|.+++.....+.. +++|+.|+++ .|.+++..
T Consensus 348 ~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~ 427 (592)
T 3ogk_B 348 RIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNG 427 (592)
T ss_dssp EEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHH
T ss_pred EeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHH
Confidence 7772 4554332 222344667777777777776655544444 6677777774 55555431
Q ss_pred -CC-CcCcccccccccccc--cccccCCCccc-CcCCCCEEEccCCccCC-CChhhccccccccccccCCceeccc-cCc
Q 002105 461 -PD-SFGSDQLENLDLSEN--RFSGTIPRSFG-RLSELMQLKISRNKLFG-DIPEELSSCKKLVSLDLSNNQLSGH-IPA 533 (966)
Q Consensus 461 -p~-~~~~~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~ 533 (966)
+. ..++++|+.|+++++ .+++..+..+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++. ++.
T Consensus 428 ~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 507 (592)
T 3ogk_B 428 VRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAA 507 (592)
T ss_dssp HHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHH
T ss_pred HHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHH
Confidence 11 123455666666532 24433333332 25666666666666654 2344445666666666666666544 233
Q ss_pred cCCCCCCCcEEeCCCCcCccc
Q 002105 534 SLSEMPVLGQLDLSENQLSGK 554 (966)
Q Consensus 534 ~l~~l~~L~~LdLs~N~l~g~ 554 (966)
.+..+++|+.|+|++|++++.
T Consensus 508 ~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 508 AVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhcCccCeeECcCCcCCHH
Confidence 334556666666666666544
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.7e-27 Score=261.81 Aligned_cols=277 Identities=22% Similarity=0.230 Sum_probs=168.4
Q ss_pred EEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCC--CCChhhhcCCCCCEEEccC
Q 002105 208 WIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTG--SIPKSILGLKSLVSFDLSD 285 (966)
Q Consensus 208 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~Ls~ 285 (966)
.++.+++.++ .+|..+. ++|++|++++|+++...+..|.++++|++|++++|+++. ..+..+..+++|++|++++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 3444444444 3343332 355566666666553333345566666666666665542 1244555566666666666
Q ss_pred CcCcccCchhhcCCCCCceecccCCCCCCCCC-CCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccc-c
Q 002105 286 NYLSGEIPEEVIQLQNLEILHLFSNNFTGKIP-SSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTG-K 363 (966)
Q Consensus 286 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~-~ 363 (966)
|.++ .+|..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+++ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 6665 345556666666666666666665443 456667777777777777766666666677777777777777765 4
Q ss_pred CCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhcc
Q 002105 364 IPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEM 443 (966)
Q Consensus 364 ~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l 443 (966)
+|..+..+++|+.|++++|++++..|..+..+++|++|+|++|++++..+..|..+++|++||+++|++++..+..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 56666666667777777777666666667777777777777777777666667777777777777777777666666666
Q ss_pred -CCCcEecCCCCcCCccCCC--Cc-CcccccccccccccccccCCCccc
Q 002105 444 -TSLQMLNLAGNNFSGKLPD--SF-GSDQLENLDLSENRFSGTIPRSFG 488 (966)
Q Consensus 444 -~~L~~L~Ls~N~l~~~~p~--~~-~~~~L~~L~Ls~N~l~~~~p~~~~ 488 (966)
++|++|+|++|.+++..+. +. .+...+.+....+.+....|..+.
T Consensus 247 ~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 247 PSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp CTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred hccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 3677777777776653221 00 112333444444555544444433
No 307
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.5e-27 Score=284.45 Aligned_cols=289 Identities=25% Similarity=0.366 Sum_probs=164.7
Q ss_pred CCCCCCCCCCCCcccceeeC--C-----CCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCC
Q 002105 39 FLSNWDSSVTFCKWNGISCQ--N-----STHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNS 111 (966)
Q Consensus 39 ~l~~w~~~~~~c~w~gv~c~--~-----~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~ 111 (966)
..+.|....+||.|+|..|. . ...++.|++++++++ .+|..+. ++|++|+|++|.|+ .||. .+++
T Consensus 11 ~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~ 82 (622)
T 3g06_A 11 VWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPE 82 (622)
T ss_dssp HHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTT
T ss_pred HHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCC
Confidence 45678766789999775321 1 124677888888887 5566554 67888888888887 5665 3477
Q ss_pred CcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCC
Q 002105 112 LRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQ 191 (966)
Q Consensus 112 L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 191 (966)
|++|+|++|+|++ +|. .+++|++|+|++|.+++ +|. .+++|++|++++|.+++ +|.. +++|++|++++|+
T Consensus 83 L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 83 LRTLEVSGNQLTS-LPV-LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp CCEEEECSCCCSC-CCC-CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred CCEEEcCCCcCCc-CCC-CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCc
Confidence 7777777777764 333 66777777777777764 333 45667777777777664 3432 3666666666666
Q ss_pred CcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChh
Q 002105 192 LIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKS 271 (966)
Q Consensus 192 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 271 (966)
+++ +|. .+++|+.|++++|.+++ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. +|..
T Consensus 153 l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~ 219 (622)
T 3g06_A 153 LAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL 219 (622)
T ss_dssp CSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC
T ss_pred CCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC
Confidence 654 332 23455566666666653 33 334555666666665553 3322 2445555555555542 2221
Q ss_pred hhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCc
Q 002105 272 ILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLT 351 (966)
Q Consensus 272 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~ 351 (966)
+++|++|++++|.++ + +| ..+++|+.|++++|.++ .+|. .+++|+
T Consensus 220 ---~~~L~~L~Ls~N~L~------------------------~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~ 264 (622)
T 3g06_A 220 ---PSGLKELIVSGNRLT------------------------S-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLL 264 (622)
T ss_dssp ---CTTCCEEECCSSCCS------------------------C-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCC
T ss_pred ---CCCCCEEEccCCccC------------------------c-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCc
Confidence 244555555555444 3 22 22344555555555554 2333 334555
Q ss_pred EEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCcccc
Q 002105 352 VIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLST 394 (966)
Q Consensus 352 ~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~ 394 (966)
.|+|++|.|+ .+|..+..+++|+.|++++|.+++..|..+..
T Consensus 265 ~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 265 SLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 306 (622)
T ss_dssp EEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHH
T ss_pred EEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHh
Confidence 5555555555 44555555555555555555555555544443
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.2e-26 Score=269.84 Aligned_cols=228 Identities=21% Similarity=0.204 Sum_probs=152.7
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 211 (966)
++|++|+|++|++++..|+.|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45555666666665555566666666666666666666555556666666666666666666555555666666666666
Q ss_pred cCCCCCCCCCcCccCCCCCCEEEeecc-cccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcc
Q 002105 212 GYNNLSGEIPKEIGDLTSLNHLDLVYN-NLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSG 290 (966)
Q Consensus 212 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 290 (966)
++|.++...+..|.++++|++|++++| .+....+..|.++++|++|+|++|++++. | .+..+++|++|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 666666544455666666666666663 33333334566677777777777777643 3 36667777777777777777
Q ss_pred cCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCccc
Q 002105 291 EIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLT 361 (966)
Q Consensus 291 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~ 361 (966)
..|..|..+++|+.|++++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 77777777777777777777777777777777788888888888877666667777788888888888766
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-26 Score=267.79 Aligned_cols=244 Identities=23% Similarity=0.234 Sum_probs=140.2
Q ss_pred CEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC--CCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccC
Q 002105 88 ESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV--PIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGG 165 (966)
Q Consensus 88 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 165 (966)
+.++.+++.++ .+|..+. ++|++|+|++|++++.. .+..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 57 ~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 45555555555 4554332 45666666666665432 245566666666666666655555666666666666666
Q ss_pred CCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCC-cCccCCCCCCEEEeecccccccC
Q 002105 166 NVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIP-KEIGDLTSLNHLDLVYNNLTGQI 244 (966)
Q Consensus 166 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~ 244 (966)
|.+++..+..|.++++|++|+|++|+++...+..|.++++|++|++++|+..+.++ ..|.++++|++|++++|++++ +
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c
Confidence 66655545555566666666666666655555555666666666666533222332 345566666666666666653 2
Q ss_pred CcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCC
Q 002105 245 PPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMP 324 (966)
Q Consensus 245 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 324 (966)
| .+..+++|++|+|++|++++..|..|.++++|+.|++++|.+++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 2 355556666666666666655555666666666666666666655555566666666666666666655555555566
Q ss_pred CccEEEccCCcCc
Q 002105 325 KLQVLQLWSNQFS 337 (966)
Q Consensus 325 ~L~~L~L~~N~l~ 337 (966)
+|+.|+|++|.+.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 6666666666554
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.4e-27 Score=257.90 Aligned_cols=205 Identities=26% Similarity=0.280 Sum_probs=98.2
Q ss_pred CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCC-CcccCCcccccCCcceEEEc
Q 002105 133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQ-LIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L 211 (966)
+|++|+|++|.+++..+..|..+++|++|+|++|.+.+..|..|.++++|++|++++|. +....|..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34444444444444334444444444444444444444444444444444444444444 33333444444455555555
Q ss_pred cCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCccc
Q 002105 212 GYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGE 291 (966)
Q Consensus 212 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (966)
++|.+++..|..+.++++|++|++++|++++..+..|+++++|++|++++|++++..+..+..+++|++|++++|.+++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 55554444444444555555555555555443334444455555555555554443333444455555555555555444
Q ss_pred CchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCc
Q 002105 292 IPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFS 337 (966)
Q Consensus 292 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 337 (966)
.|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 4444444455555555555554433334444555555555555544
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.9e-28 Score=270.16 Aligned_cols=248 Identities=20% Similarity=0.201 Sum_probs=142.1
Q ss_pred cCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcC-------C
Q 002105 82 FHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIG-------S 154 (966)
Q Consensus 82 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-------~ 154 (966)
+..++|+.|++++|.+ .+|..+... |++|+|++|.++. +.+|..+. +
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~---L~~L~L~~n~l~~---------------------~~~~~~~~~~~~~~~~ 93 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI---IKSLSLKRLTVRA---------------------ARIPSRILFGALRVLG 93 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH---HHHCCCCEEEEEE---------------------EECBHHHHHHHHHHHT
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH---HhhcccccccccC---------------------CCcCHHHHHHHHHhcC
Confidence 4455678888888888 677766543 5555666555531 22333333 4
Q ss_pred CCCcCEEEccCCCCcccCCcCC--CCCCCCCEEEccCCCCcccCCcccccC-----CcceEEEccCCCCCCCCCcCccCC
Q 002105 155 FSGLKVLDLGGNVLVGEIPLSI--SNITSLQIFTLASNQLIGSIPREIGQL-----RNLKWIYLGYNNLSGEIPKEIGDL 227 (966)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~l~~l 227 (966)
+++|++|+|++|.+++.+|..+ ..+++|++|++++|++++. |..++.+ ++|++|+|++|.+++..|..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 5566666666666665555554 5666666666666666654 5555555 666666666666666555666666
Q ss_pred CCCCEEEeeccccccc--CCcCC--CCCCccceEeccccccCCC--CC-hhhhcCCCCCEEEccCCcCcccCc-hhhcCC
Q 002105 228 TSLNHLDLVYNNLTGQ--IPPSF--GNLSNLRYLFLYQNKLTGS--IP-KSILGLKSLVSFDLSDNYLSGEIP-EEVIQL 299 (966)
Q Consensus 228 ~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~L~~n~l~~~--~p-~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 299 (966)
++|++|++++|++.+. .|..+ +++++|++|++++|++++. ++ ..+.++++|++|++++|.+++..| ..+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 6666666666665543 22222 5666666666666666521 11 223455666666666666665443 233445
Q ss_pred CCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCccc
Q 002105 300 QNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLT 361 (966)
Q Consensus 300 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~ 361 (966)
++|+.|++++|.++ .+|..+. ++|++|++++|++++. |. +..+++|+.|++++|.++
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 55666666666555 4444443 5555555555555543 33 555555555555555554
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=4.9e-26 Score=263.58 Aligned_cols=247 Identities=24% Similarity=0.244 Sum_probs=130.9
Q ss_pred CCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCC
Q 002105 87 VESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGN 166 (966)
Q Consensus 87 L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 166 (966)
.+.++.+++.+. .+|..+. +++++|+|++|++ ++..+..|.++++|++|+|++|
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i----------------------~~~~~~~~~~l~~L~~L~Ls~n 98 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQI----------------------QIIKVNSFKHLRHLEILQLSRN 98 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCC----------------------CEECTTTTSSCSSCCEEECCSS
T ss_pred CCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcC----------------------CeeCHHHhhCCCCCCEEECCCC
Confidence 456777777776 6776443 3444555554444 4444444555555555555555
Q ss_pred CCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecc-cccccCC
Q 002105 167 VLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYN-NLTGQIP 245 (966)
Q Consensus 167 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~p 245 (966)
.+.+..+..|.++++|++|+|++|+++...+..|..+++|++|+|++|.++...+..|.++++|++|++++| .+....+
T Consensus 99 ~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 99 HIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp CCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred cCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 554444444555555555555555554444444555555555555555554444444555555555555553 2332223
Q ss_pred cCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002105 246 PSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPK 325 (966)
Q Consensus 246 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 325 (966)
..|.++++|++|+|++|+++. +| .+..+++|++|+|++|.+++..|..|..+++|+.|++++|++++..+..|.++++
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred chhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCC
Confidence 345555555566665555552 23 2455555556666655555555555555555555555555555555555555555
Q ss_pred ccEEEccCCcCcccCCccccCCCCCcEEEccCCccc
Q 002105 326 LQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLT 361 (966)
Q Consensus 326 L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~ 361 (966)
|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 666666555555544445555555555555555544
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=6.5e-27 Score=254.40 Aligned_cols=224 Identities=24% Similarity=0.226 Sum_probs=140.2
Q ss_pred eEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCC
Q 002105 207 KWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDN 286 (966)
Q Consensus 207 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 286 (966)
++++.+++.++ .+|..+ .++|++|++++|++++..+..|.++++|++|++++|.+++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 46777777776 455443 357777777777777666667777777777777777777666777777777777777777
Q ss_pred c-CcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCC
Q 002105 287 Y-LSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIP 365 (966)
Q Consensus 287 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p 365 (966)
. ++...|..+..+++|+.|++++|.+++..|..+.++++|++|++++|.+++..+..+..+++|+.|++++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 655556666677777777777777766666666667777777777777665555556666666666666666665444
Q ss_pred CCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCC
Q 002105 366 ETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLS 433 (966)
Q Consensus 366 ~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~ 433 (966)
..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|++|++++|.+.
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 44555555555555555555444444555555555555555544444444444444444444444443
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=2.4e-26 Score=266.15 Aligned_cols=230 Identities=22% Similarity=0.248 Sum_probs=124.9
Q ss_pred CccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeecc
Q 002105 325 KLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQ 404 (966)
Q Consensus 325 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 404 (966)
+++.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|++++|++++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 44445555555544444444445555555555555444444444444444444444444444444455555556666666
Q ss_pred ccccCCcCChhhcCCCcccEEcccCCC-CCCccCcchhccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccC
Q 002105 405 NNRLSGELSSEFTRLPLVYFLDISGND-LSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTI 483 (966)
Q Consensus 405 ~N~l~~~~~~~~~~l~~L~~LdLs~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~ 483 (966)
+|++....+..|..+++|++|++++|. +....+..+..+++|++|+|++|+++. +|.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~--------------------- 202 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN--------------------- 202 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC---------------------
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc---------------------
Confidence 665555555555555666666665532 222223344455555555555555542 222
Q ss_pred CCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCC
Q 002105 484 PRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVA 563 (966)
Q Consensus 484 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~ 563 (966)
+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|++++..+..|..++
T Consensus 203 ---~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 203 ---LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp ---CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred ---cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 44455555566666655555555566666666666666666666566666666666666666666655555566666
Q ss_pred CCCeeeCcCCcccccC
Q 002105 564 SLVQVNISHNHFHGSL 579 (966)
Q Consensus 564 ~L~~l~ls~N~l~g~i 579 (966)
+|+.|++++|++.+..
T Consensus 280 ~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 280 HLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCCEEECCSSCEECSS
T ss_pred CCCEEEcCCCCccCCC
Confidence 6666666666665543
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.6e-28 Score=269.63 Aligned_cols=265 Identities=20% Similarity=0.188 Sum_probs=144.1
Q ss_pred eEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCc
Q 002105 256 YLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQ 335 (966)
Q Consensus 256 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 335 (966)
.++++.+.+.......+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++..+ +..+++|++|++++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 33444444432222333344455555555555555444555555555555555555544332 4445555555555554
Q ss_pred CcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChh
Q 002105 336 FSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSE 415 (966)
Q Consensus 336 l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 415 (966)
+++.. ..++|+.|++++|.++ +..+.. +++|++|++++|++++..+..
T Consensus 92 l~~l~-----~~~~L~~L~l~~n~l~------------------------~~~~~~---~~~L~~L~l~~N~l~~~~~~~ 139 (317)
T 3o53_A 92 VQELL-----VGPSIETLHAANNNIS------------------------RVSCSR---GQGKKNIYLANNKITMLRDLD 139 (317)
T ss_dssp EEEEE-----ECTTCCEEECCSSCCS------------------------EEEECC---CSSCEEEECCSSCCCSGGGBC
T ss_pred ccccc-----CCCCcCEEECCCCccC------------------------CcCccc---cCCCCEEECCCCCCCCccchh
Confidence 44221 1134444444444443 222211 344555555555555555555
Q ss_pred hcCCCcccEEcccCCCCCCccCcchh-ccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCC
Q 002105 416 FTRLPLVYFLDISGNDLSGRIGEQKW-EMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELM 494 (966)
Q Consensus 416 ~~~l~~L~~LdLs~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 494 (966)
|..+++|++|++++|.+++..+..+. .+++|++|+|++|.+++ . | ....+++|+
T Consensus 140 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-----------------------~-~-~~~~l~~L~ 194 (317)
T 3o53_A 140 EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-----------------------V-K-GQVVFAKLK 194 (317)
T ss_dssp TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-----------------------E-E-CCCCCTTCC
T ss_pred hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-----------------------c-c-cccccccCC
Confidence 55555555555555555554444332 34455555555554443 2 1 112356667
Q ss_pred EEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCc-ccCCcccccCCCCCeeeCc-C
Q 002105 495 QLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLS-GKIPQTLGRVASLVQVNIS-H 572 (966)
Q Consensus 495 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~-g~~p~~l~~l~~L~~l~ls-~ 572 (966)
.|+|++|++++. |..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ +.+|..+..++.|+.++++ .
T Consensus 195 ~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 195 TLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp EEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 777777777643 334677777777777777777 45667777777888888888877 6677777777777777777 4
Q ss_pred CcccccCCC
Q 002105 573 NHFHGSLPS 581 (966)
Q Consensus 573 N~l~g~ip~ 581 (966)
+.+.|..|.
T Consensus 273 ~~l~~~~~~ 281 (317)
T 3o53_A 273 KKLTGQNEE 281 (317)
T ss_dssp HHHHSSSSC
T ss_pred hhccCCchh
Confidence 456665553
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=9.3e-28 Score=264.58 Aligned_cols=202 Identities=25% Similarity=0.257 Sum_probs=96.9
Q ss_pred CCCCCCEEEeecccccccCCcCC--CCCCccceEeccccccCCCCChhhhcC-----CCCCEEEccCCcCcccCchhhcC
Q 002105 226 DLTSLNHLDLVYNNLTGQIPPSF--GNLSNLRYLFLYQNKLTGSIPKSILGL-----KSLVSFDLSDNYLSGEIPEEVIQ 298 (966)
Q Consensus 226 ~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~Ls~N~l~~~~p~~~~~ 298 (966)
++++|++|++++|++++.+|..+ +.+++|++|+|++|++++. |..+..+ ++|++|++++|.+++..|..+..
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 44555555555555555444443 4555555555555555544 4444444 45555555555554444444445
Q ss_pred CCCCceecccCCCCCCC--CCCC--CCCCCCccEEEccCCcCcc--cCC-ccccCCCCCcEEEccCCcccccCC-CCccC
Q 002105 299 LQNLEILHLFSNNFTGK--IPSS--LASMPKLQVLQLWSNQFSG--EIP-SNLGKQNNLTVIDLSTNFLTGKIP-ETLCD 370 (966)
Q Consensus 299 l~~L~~L~L~~N~l~~~--~p~~--l~~l~~L~~L~L~~N~l~~--~~p-~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~ 370 (966)
+++|+.|++++|++.+. .|.. +..+++|++|++++|++++ .++ ..+..+++|+.|+|++|.+++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 55555555555544332 1111 2455566666666666552 111 223445566666666666665443 22333
Q ss_pred CCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCC
Q 002105 371 SGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLS 433 (966)
Q Consensus 371 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~ 433 (966)
+++|+.|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|+++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 444444444444444 3343333 4445555555554444 22 444444444444444443
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.4e-27 Score=263.87 Aligned_cols=268 Identities=17% Similarity=0.162 Sum_probs=189.5
Q ss_pred CCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceeccc
Q 002105 229 SLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLF 308 (966)
Q Consensus 229 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 308 (966)
+++.++++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|++++|.+++..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45566777777765555556778899999999999998888899999999999999999997665 8899999999999
Q ss_pred CCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCC
Q 002105 309 SNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKI 388 (966)
Q Consensus 309 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~ 388 (966)
+|.+++.. ..++|+.|++++|++++..+.. +++|+.|++++|.+++..+..+
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~-------------------- 140 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDE-------------------- 140 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCT--------------------
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhh--------------------
Confidence 99998533 3489999999999998765443 4567777777777765544444
Q ss_pred CCccccCccCceeeccccccCCcCChhh-cCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCcc
Q 002105 389 PNSLSTCKSLRRVRLQNNRLSGELSSEF-TRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSD 467 (966)
Q Consensus 389 p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 467 (966)
..+++|++|++++|++++..+..+ ..+++|++|++++|.+++..+. ..+++|++|+|++|++++..+.+..++
T Consensus 141 ----~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~l~~L~~L~Ls~N~l~~l~~~~~~l~ 214 (317)
T 3o53_A 141 ----GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--VVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (317)
T ss_dssp ----GGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--CCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred ----hccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccc--cccccCCEEECCCCcCCcchhhhcccC
Confidence 445555555555555555544444 2456666666666666654221 235666666666666665544444556
Q ss_pred cccccccccccccccCCCcccCcCCCCEEEccCCccC-CCChhhccccccccccccC-CceeccccCc
Q 002105 468 QLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLF-GDIPEELSSCKKLVSLDLS-NNQLSGHIPA 533 (966)
Q Consensus 468 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~ 533 (966)
+|+.|+|++|+++ .+|..+..+++|+.|++++|.+. +.+|..+..+++|+.|+++ .+.++|..|.
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 6666666666666 35666777777777777777777 6667777777777777777 4445555444
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.8e-25 Score=266.71 Aligned_cols=267 Identities=27% Similarity=0.350 Sum_probs=152.6
Q ss_pred CCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceeccc
Q 002105 229 SLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLF 308 (966)
Q Consensus 229 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 308 (966)
+++.|++++|.++ .+|..+. ++|++|++++|+++. +|. .+++|++|+|++|.+++ +|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 5778888888877 5666554 677888888887773 444 45677777777777763 443 55667777777
Q ss_pred CCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCC
Q 002105 309 SNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKI 388 (966)
Q Consensus 309 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~ 388 (966)
+|.+++ +|. .+++|+.|++++|++++ +|.. +++|+.|+|++|.+++ +|. .
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~------------------ 159 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---L------------------ 159 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---C------------------
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---c------------------
Confidence 776664 333 34566666666666654 3332 2556666666665553 222 1
Q ss_pred CCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCccc
Q 002105 389 PNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQ 468 (966)
Q Consensus 389 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 468 (966)
+.+|+.|++++|++++. | ..+++|+.|++++|++++. |. .+++|+.|++++|.++. +|.. .++
T Consensus 160 ------~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~~~--~~~ 222 (622)
T 3g06_A 160 ------PSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLASL-PT---LPSELYKLWAYNNRLTS-LPAL--PSG 222 (622)
T ss_dssp ------CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSS-CCCC--CTT
T ss_pred ------cCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCCC-CC---ccchhhEEECcCCcccc-cCCC--CCC
Confidence 23344444444444432 1 2234455555555555432 11 12455555555555553 2221 245
Q ss_pred ccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCC
Q 002105 469 LENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSE 548 (966)
Q Consensus 469 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~ 548 (966)
|+.|+|++|.+++ +| ..+++|+.|+|++|+++ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 223 L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 223 LKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 5666666666654 33 33456666666666665 3443 4556666666666666 5566666666666666666
Q ss_pred CcCcccCCcccccC
Q 002105 549 NQLSGKIPQTLGRV 562 (966)
Q Consensus 549 N~l~g~~p~~l~~l 562 (966)
|++++.+|..+..+
T Consensus 294 N~l~~~~~~~l~~L 307 (622)
T 3g06_A 294 NPLSERTLQALREI 307 (622)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCCcCHHHHHhc
Confidence 66666666655544
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.8e-25 Score=239.41 Aligned_cols=215 Identities=28% Similarity=0.384 Sum_probs=119.4
Q ss_pred CCCCcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC
Q 002105 47 VTFCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV 126 (966)
Q Consensus 47 ~~~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~ 126 (966)
.++|.|.|+.|.-...++.+++++++++. +|..+. +.|++|+|++|++. .+|...|..+++|++|+|++|.+++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 38999999999654455677777777774 444443 46777777777776 455555555566666666666555322
Q ss_pred C--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCC
Q 002105 127 P--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLR 204 (966)
Q Consensus 127 ~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 204 (966)
+ +..+++|++|+|++|.+++..+..|..+++|++|+|++|.+.+..|..|.+++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~------------------------ 133 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT------------------------ 133 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT------------------------
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc------------------------
Confidence 2 24455555555555555544444445555555555555555444444444444
Q ss_pred cceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEcc
Q 002105 205 NLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLS 284 (966)
Q Consensus 205 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 284 (966)
+|++|+|++|.+++..+..|..+++|++|++++|.+++..+..|.++++|++|++++|++++..+..+..+++|+.|+++
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 44555555554443333344555555555555555554444445555555555555555554444445555555555555
Q ss_pred CCcCc
Q 002105 285 DNYLS 289 (966)
Q Consensus 285 ~N~l~ 289 (966)
+|.+.
T Consensus 214 ~N~~~ 218 (270)
T 2o6q_A 214 ENPWD 218 (270)
T ss_dssp SSCBC
T ss_pred CCCee
Confidence 55543
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=9.3e-27 Score=272.27 Aligned_cols=234 Identities=23% Similarity=0.221 Sum_probs=129.1
Q ss_pred CCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEcc
Q 002105 301 NLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILF 380 (966)
Q Consensus 301 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~ 380 (966)
+|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|+.|+|++|.+++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44444444444444444444445555555555555444333 4444555555555555443211 1334444444
Q ss_pred CCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchh-ccCCCcEecCCCCcCCcc
Q 002105 381 SNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKW-EMTSLQMLNLAGNNFSGK 459 (966)
Q Consensus 381 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~ 459 (966)
+|.+++..+. .+++|+.|+|++|++++..|..|..+++|++|+|++|.+++.+|..+. .+++|+.|+|++|.+++
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~- 183 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD- 183 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc-
Confidence 4444433322 124455555555555555555555555555555555555555444443 34555555555554443
Q ss_pred CCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCC
Q 002105 460 LPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMP 539 (966)
Q Consensus 460 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 539 (966)
..+ +..+++|+.|+|++|++++..| .+..+++|+.|+|++|.|++ +|..++.++
T Consensus 184 ----------------------~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~ 237 (487)
T 3oja_A 184 ----------------------VKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (487)
T ss_dssp ----------------------EEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred ----------------------ccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCC
Confidence 311 2235666677777777765433 36677777777777777774 566677777
Q ss_pred CCcEEeCCCCcCc-ccCCcccccCCCCCeeeCc
Q 002105 540 VLGQLDLSENQLS-GKIPQTLGRVASLVQVNIS 571 (966)
Q Consensus 540 ~L~~LdLs~N~l~-g~~p~~l~~l~~L~~l~ls 571 (966)
+|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 238 ~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 7888888888777 6666777777777777775
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.6e-26 Score=270.39 Aligned_cols=239 Identities=22% Similarity=0.223 Sum_probs=143.9
Q ss_pred ccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCE
Q 002105 81 IFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKV 160 (966)
Q Consensus 81 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 160 (966)
....++|++|+|++|.+++ +++..|..+++|++|+|++|.+++..|++.+++|++|+|++|.+++..+ .++|++
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQ-ISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp STTGGGCCEEECCSSCCCC-CCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cccCCCccEEEeeCCcCCC-CCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 3344578888888888874 5555666778888888888888776667777788888888887764322 267777
Q ss_pred EEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCcc-CCCCCCEEEeeccc
Q 002105 161 LDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIG-DLTSLNHLDLVYNN 239 (966)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~ 239 (966)
|++++|.+.+..+. .+++|+.|++++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 77777777655443 245566666666666666666666666666666666666655555554 55666666666666
Q ss_pred ccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCC
Q 002105 240 LTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSS 319 (966)
Q Consensus 240 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 319 (966)
+++..+ +..+++|++|+|++|.+++. |..+..+++|+.|++++|. +++ +|..
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~------------------------l~~-lp~~ 232 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNK------------------------LVL-IEKA 232 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSC------------------------CCE-ECTT
T ss_pred cccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCc------------------------Ccc-cchh
Confidence 554311 22355555555555555432 2224444445555555444 443 3444
Q ss_pred CCCCCCccEEEccCCcCc-ccCCccccCCCCCcEEEcc
Q 002105 320 LASMPKLQVLQLWSNQFS-GEIPSNLGKQNNLTVIDLS 356 (966)
Q Consensus 320 l~~l~~L~~L~L~~N~l~-~~~p~~~~~~~~L~~L~Ls 356 (966)
+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 233 l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 233 LRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 555555555555555554 4444555555555555553
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=6.8e-27 Score=277.18 Aligned_cols=179 Identities=17% Similarity=0.089 Sum_probs=124.1
Q ss_pred CCCCccEEEEEEEecCCcEEEEEEEeccCc----------ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 692 GKKGVSSSYKVRSLANDMQFVVKKIIDVNT----------ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 692 g~~g~~~vy~~~~~~~~~~vavk~~~~~~~----------~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
+.|+.|.+++++....|..+|+|.+..... ...++|.+|++.+.++-.|+||+++++++++++..|||||
T Consensus 243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVME 322 (569)
T 4azs_A 243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVME 322 (569)
T ss_dssp C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEE
T ss_pred ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEe
Confidence 445555577777777899999999864321 1234588999999986689999999999999999999999
Q ss_pred ccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC------
Q 002105 762 YIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS------ 835 (966)
Q Consensus 762 y~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~------ 835 (966)
||+||+|.++|+........+|+.||+.||+|+| +.+||||||||+|||+++++ .+|+.|||++.....
T Consensus 323 yv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg--~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 323 KLPGRLLSDMLAAGEEIDREKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQ--HARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp CCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTS--CEEECCCTTEESCC---CCSH
T ss_pred cCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHH---HCCceeccCchHhEEECCCC--CEEEeecccCeeCCCCCcccc
Confidence 9999999999975221122368999999999999 55999999999999999764 589999999865322
Q ss_pred CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCC
Q 002105 836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSP 876 (966)
Q Consensus 836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p 876 (966)
..+||++|||||++.+ .+..++|+||+|++++++.+|..|
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2368999999999876 467789999999998887665443
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=9.3e-24 Score=228.30 Aligned_cols=205 Identities=25% Similarity=0.226 Sum_probs=119.1
Q ss_pred CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
+|++|+|++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|++|++++|.+++..+..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555444555566666666666666555555555666666666666666655555556666666666666
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeeccccccc-CCcCCCCCCccceEeccccccCCCCChhhhcCCCCC----EEEccCCc
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQ-IPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLV----SFDLSDNY 287 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~Ls~N~ 287 (966)
+|.+++..+..++.+++|++|++++|.+++. +|..|+++++|++|++++|++++..+..+..+++|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 6666554444566666666666666666542 455666666666666666666655555555555554 56666666
Q ss_pred CcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcc
Q 002105 288 LSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSG 338 (966)
Q Consensus 288 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 338 (966)
+++..+..+ ...+|+.|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 189 l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 189 MNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 664433332 23356666666666665444455556666666666666554
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.9e-23 Score=225.95 Aligned_cols=223 Identities=23% Similarity=0.195 Sum_probs=178.7
Q ss_pred EEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCC
Q 002105 136 ILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNN 215 (966)
Q Consensus 136 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 215 (966)
+.+.++..+. .+|..+. ++|++|+|++|.+.+..+..|.++++|++|++++|++++..+..+..+++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4555666665 4666554 579999999999998877789999999999999999998888889999999999999999
Q ss_pred CCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCC-CChhhhcCCCCCEEEccCCcCcccCch
Q 002105 216 LSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGS-IPKSILGLKSLVSFDLSDNYLSGEIPE 294 (966)
Q Consensus 216 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 294 (966)
+++..+..|.++++|++|++++|++.+..+..++++++|++|++++|++++. +|..+.++++|++|++++|.+++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 9988888899999999999999999987777899999999999999999864 588899999999999999999887777
Q ss_pred hhcCCCCCc----eecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccc
Q 002105 295 EVIQLQNLE----ILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTG 362 (966)
Q Consensus 295 ~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~ 362 (966)
.+..+.+|+ .|++++|.+++..+..+. ..+|+.|++++|++++..+..+..+++|+.|++++|.+++
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred HhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 777666666 677777777755444443 3467777777777765555555666667777776666654
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=6.1e-28 Score=291.06 Aligned_cols=157 Identities=17% Similarity=0.107 Sum_probs=94.1
Q ss_pred CccCceeeccccccCCcCChhhc-CCCcccEEccc--C----CCCCCc-----cCcchhccCCCcEecCCCCcCCccCCC
Q 002105 395 CKSLRRVRLQNNRLSGELSSEFT-RLPLVYFLDIS--G----NDLSGR-----IGEQKWEMTSLQMLNLAGNNFSGKLPD 462 (966)
Q Consensus 395 l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~LdLs--~----N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 462 (966)
+++|+.|.+..|.+++.....+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 55566666666666544444333 35666666666 3 344421 112244566777777765 44433222
Q ss_pred -Cc-CcccccccccccccccccCCCcc-cCcCCCCEEEccCCccCCCChh-hccccccccccccCCceeccccCccC-CC
Q 002105 463 -SF-GSDQLENLDLSENRFSGTIPRSF-GRLSELMQLKISRNKLFGDIPE-ELSSCKKLVSLDLSNNQLSGHIPASL-SE 537 (966)
Q Consensus 463 -~~-~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~ 537 (966)
+. .+++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. ....+++|+.|++++|+++......+ ..
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~ 529 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQK 529 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHH
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHh
Confidence 11 24667778888777765544444 5678888888888888554443 34558888888888888865433334 45
Q ss_pred CCCCcEEeCCCCcCc
Q 002105 538 MPVLGQLDLSENQLS 552 (966)
Q Consensus 538 l~~L~~LdLs~N~l~ 552 (966)
++.|+...+..+.-.
T Consensus 530 lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 530 MPKLNVEVIDERGAP 544 (594)
T ss_dssp CTTEEEEEECSSSCG
T ss_pred CCCCEEEEecCCCcc
Confidence 677777777666543
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=8.3e-24 Score=228.07 Aligned_cols=205 Identities=27% Similarity=0.298 Sum_probs=106.9
Q ss_pred CCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccC
Q 002105 110 NSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLAS 189 (966)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 189 (966)
++|+.|++++|.++....+..+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..+..|.++++|++|++++
T Consensus 41 ~~L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCcccccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 45555555555554433344455555555555555531 2455555555555555555544444455555555555555
Q ss_pred CCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC
Q 002105 190 NQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP 269 (966)
Q Consensus 190 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 269 (966)
|++++..+..++.+++|++|++++|.+++..+..++.+++|++|++++|++++..+..|+++++|++|++++|++++..+
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 55554444445555555555555555554444445555555555555555554444445555555555555555555444
Q ss_pred hhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCC
Q 002105 270 KSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASM 323 (966)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 323 (966)
..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.+
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 199 GVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp TTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred HHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 4455555555555555544432 2234455555555555555444443
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=8.5e-24 Score=228.01 Aligned_cols=211 Identities=23% Similarity=0.245 Sum_probs=183.9
Q ss_pred ccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCE
Q 002105 81 IFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKV 160 (966)
Q Consensus 81 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 160 (966)
+..+++|+.|++++|.+. .++. +..+++|++|+|++|.+++...++.+++|++|+|++|.+++..+..+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQG--IQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCTT--GGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred cccccceeeeeeCCCCcc-cccc--cccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 456788999999999887 4543 5567999999999999987656788999999999999999888888899999999
Q ss_pred EEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccc
Q 002105 161 LDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNL 240 (966)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 240 (966)
|+|++|.+.+..|..|.++++|++|++++|++++..+..++.+++|++|++++|.+++..+..++.+++|++|++++|++
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 99999999988887889999999999999999987777789999999999999999987777789999999999999999
Q ss_pred cccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCC
Q 002105 241 TGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQN 301 (966)
Q Consensus 241 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 301 (966)
++..|..+.++++|++|++++|.+.+. +++|+.|+++.|.++|.+|.+++.+..
T Consensus 194 ~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 194 KSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 988888889999999999999988764 456888899999999999988876654
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=2.5e-27 Score=285.70 Aligned_cols=417 Identities=16% Similarity=0.173 Sum_probs=221.3
Q ss_pred CCCCCcEEeCCCCCCCC---cCCCC------------cCCCCCcCEEEccCCCCcccCCcCCC-CCCCCCEEEccCC-CC
Q 002105 130 SLSRLEILDLSNNMLSG---KIPEE------------IGSFSGLKVLDLGGNVLVGEIPLSIS-NITSLQIFTLASN-QL 192 (966)
Q Consensus 130 ~l~~L~~L~Ls~N~l~~---~~p~~------------~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~n-~l 192 (966)
.+++|++|+|+++.... ..|.. ...+++|++|+|++|.+++..+..+. .+++|++|++++| .+
T Consensus 64 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~ 143 (594)
T 2p1m_B 64 RFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGF 143 (594)
T ss_dssp HCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEE
T ss_pred hCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCC
Confidence 35789999999875321 12221 23466777777777776655554454 5677777777776 33
Q ss_pred ccc-CCcccccCCcceEEEccCCCCCCCCCcCcc----CCCCCCEEEeeccc--cccc-CCcCCCCCCccceEecccc-c
Q 002105 193 IGS-IPREIGQLRNLKWIYLGYNNLSGEIPKEIG----DLTSLNHLDLVYNN--LTGQ-IPPSFGNLSNLRYLFLYQN-K 263 (966)
Q Consensus 193 ~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~----~l~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~L~~n-~ 263 (966)
... ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. +... ++..+.++++|++|++++| .
T Consensus 144 ~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~ 223 (594)
T 2p1m_B 144 STDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVP 223 (594)
T ss_dssp EHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSC
T ss_pred CHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCc
Confidence 321 333334566777777777766554333332 44566666666654 1100 1111223456666666655 2
Q ss_pred cCCCCChhhhcCCCCCEEEccCCc-------CcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcC
Q 002105 264 LTGSIPKSILGLKSLVSFDLSDNY-------LSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQF 336 (966)
Q Consensus 264 l~~~~p~~l~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 336 (966)
+.+ ++..+..+++|+.|+++.+. +.+ ++..+.++++|+.|. .+.....
T Consensus 224 ~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls-----------------------~~~~~~~ 278 (594)
T 2p1m_B 224 LEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLS-----------------------GFWDAVP 278 (594)
T ss_dssp HHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEE-----------------------CCBTCCG
T ss_pred HHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCccccc-----------------------CCcccch
Confidence 222 45555555666666543322 221 223444455555541 1211111
Q ss_pred cccCCccccCCCCCcEEEccCCcccccCC-CCccCCCCccEEEccCCCCCC-CCCCccccCccCceeecc---------c
Q 002105 337 SGEIPSNLGKQNNLTVIDLSTNFLTGKIP-ETLCDSGSLFKLILFSNSLEG-KIPNSLSTCKSLRRVRLQ---------N 405 (966)
Q Consensus 337 ~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~L~---------~ 405 (966)
+.++..+..+++|+.|+|++|.+++... ..+..+++|+.|++++| +.. .++.....+++|++|++. .
T Consensus 279 -~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~ 356 (594)
T 2p1m_B 279 -AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPN 356 (594)
T ss_dssp -GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCS
T ss_pred -hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccC
Confidence 1222222333444444444444332111 11223344444444444 111 111122245667777663 3
Q ss_pred cccCCcCChhhc-CCCcccEEcccCCCCCCccCcchh-ccCCCcEecCC--C----CcCCccCCC------CcCcccccc
Q 002105 406 NRLSGELSSEFT-RLPLVYFLDISGNDLSGRIGEQKW-EMTSLQMLNLA--G----NNFSGKLPD------SFGSDQLEN 471 (966)
Q Consensus 406 N~l~~~~~~~~~-~l~~L~~LdLs~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~p~------~~~~~~L~~ 471 (966)
+.+++.....+. .+++|+.|+++.|.+++.....+. .+++|+.|+++ + |.+++...+ +..+++|+.
T Consensus 357 ~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~ 436 (594)
T 2p1m_B 357 VALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRR 436 (594)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCE
T ss_pred CCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccE
Confidence 445433333333 478888888888888765555554 47888888888 4 455532111 123467778
Q ss_pred cccccccccccCCCcccC-cCCCCEEEccCCccCCCChhhc-cccccccccccCCceeccccCc-cCCCCCCCcEEeCCC
Q 002105 472 LDLSENRFSGTIPRSFGR-LSELMQLKISRNKLFGDIPEEL-SSCKKLVSLDLSNNQLSGHIPA-SLSEMPVLGQLDLSE 548 (966)
Q Consensus 472 L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~LdLs~ 548 (966)
|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. ....+++|+.|++++
T Consensus 437 L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~ 515 (594)
T 2p1m_B 437 LSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSS 515 (594)
T ss_dssp EECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEES
T ss_pred EeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeC
Confidence 88866 555544444444 6778888888887766555444 5677788888888877654433 334567788888888
Q ss_pred CcCcccCCccc-ccCCCCCeeeCcCCc
Q 002105 549 NQLSGKIPQTL-GRVASLVQVNISHNH 574 (966)
Q Consensus 549 N~l~g~~p~~l-~~l~~L~~l~ls~N~ 574 (966)
|+++..-...+ ..++.|....+..+.
T Consensus 516 ~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 516 CSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp SCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 87754333333 345555544444443
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=2.2e-22 Score=216.68 Aligned_cols=202 Identities=25% Similarity=0.275 Sum_probs=106.1
Q ss_pred CcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCC
Q 002105 112 LRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQ 191 (966)
Q Consensus 112 L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 191 (966)
.++++++++.++. +|..-..+|++|+|++|++++..+..|..+++|++|+|++|.++...+..|.++++|++|++++|+
T Consensus 18 ~~~l~~~~~~l~~-ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~ 96 (270)
T 2o6q_A 18 KNSVDCSSKKLTA-IPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96 (270)
T ss_dssp TTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSC
T ss_pred CCEEEccCCCCCc-cCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCc
Confidence 3444444444442 222222455666666666655555556666666666666666654444444555555555555555
Q ss_pred CcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChh
Q 002105 192 LIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKS 271 (966)
Q Consensus 192 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 271 (966)
+.+..+..+..+++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|
T Consensus 97 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L----------------- 159 (270)
T 2o6q_A 97 LQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL----------------- 159 (270)
T ss_dssp CCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-----------------
T ss_pred CCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccc-----------------
Confidence 554444444555555555555555554444445555555555555555544333334444444
Q ss_pred hhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcc
Q 002105 272 ILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSG 338 (966)
Q Consensus 272 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 338 (966)
++|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 160 -------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 160 -------KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp -------CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -------ceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 445555444444444444455555555555555554444455566666666666666543
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=5.1e-22 Score=215.87 Aligned_cols=113 Identities=26% Similarity=0.282 Sum_probs=47.0
Q ss_pred ccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCc
Q 002105 224 IGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLE 303 (966)
Q Consensus 224 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 303 (966)
+..+++|++|++++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+
T Consensus 96 ~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 175 (290)
T 1p9a_G 96 GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175 (290)
T ss_dssp TTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCC
T ss_pred hccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCC
Confidence 33333333333333333333333334444444444444444333333333444444444444444433333333444444
Q ss_pred eecccCCCCCCCCCCCCCCCCCccEEEccCCcCc
Q 002105 304 ILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFS 337 (966)
Q Consensus 304 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 337 (966)
.|++++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 176 ~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 176 TLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp EEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred EEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 4444444444 33444444445555555555443
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.5e-22 Score=212.61 Aligned_cols=188 Identities=23% Similarity=0.292 Sum_probs=99.7
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC
Q 002105 48 TFCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP 127 (966)
Q Consensus 48 ~~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~ 127 (966)
+||.|.|++|... .++++++++.++ .+|..+. +.|++|+|++|.+++..+
T Consensus 3 ~Cp~~~gC~C~~~--------------------------~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~ 52 (251)
T 3m19_A 3 TCETVTGCTCNEG--------------------------KKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSD 52 (251)
T ss_dssp -CHHHHSSEEEGG--------------------------GTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC--------------------------CeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCH
Confidence 6889999999531 233455555554 4554322 334444444444443221
Q ss_pred --CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCc
Q 002105 128 --IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRN 205 (966)
Q Consensus 128 --~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 205 (966)
+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|++++|++++..+..+..+++
T Consensus 53 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 132 (251)
T 3m19_A 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCc
Confidence 344555666666666665555555666666666666666666555555555555555555555555444444455555
Q ss_pred ceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccC
Q 002105 206 LKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLT 265 (966)
Q Consensus 206 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 265 (966)
|++|+|++|.+++..+..|+.+++|++|+|++|++++..+..|.++++|++|+|++|.+.
T Consensus 133 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 133 LKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 555555555555444444555555555555555555444444444555555555555444
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=7.2e-22 Score=214.70 Aligned_cols=134 Identities=28% Similarity=0.245 Sum_probs=74.6
Q ss_pred CCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCcee
Q 002105 226 DLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEIL 305 (966)
Q Consensus 226 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 305 (966)
.+++|++|++++|+++ .+|..+..+++|++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 4445555555555554 345555555556666666666555545555555566666666665555444445555556666
Q ss_pred cccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCccc
Q 002105 306 HLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLT 361 (966)
Q Consensus 306 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~ 361 (966)
+|++|++++..+..|..+++|+.|+|++|+++ .+|..+....+|+.++|++|.+.
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 66666555444444555556666666666555 44555555555566666655554
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.3e-24 Score=242.14 Aligned_cols=231 Identities=19% Similarity=0.248 Sum_probs=129.4
Q ss_pred CCCcccceeeCCCCCEEEEEcCCCCccccccccccCC--CCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCC
Q 002105 48 TFCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHL--PHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGP 125 (966)
Q Consensus 48 ~~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l--~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~ 125 (966)
-|.+|+++.|+. ..++.+|++++.+. +..+..+ ++++.|++++|.+.+.++. ++ .+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~-~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HF-SPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CC-CCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc-hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hc-cCCCCCEEEccCCCcCHH
Confidence 566899999863 34667777777665 3344445 6677777777777654433 33 346666666666666532
Q ss_pred -CC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCC-CCcc-cCCcCCCCCCCCCEEEccCC-CCccc-CCc
Q 002105 126 -VP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGN-VLVG-EIPLSISNITSLQIFTLASN-QLIGS-IPR 198 (966)
Q Consensus 126 -~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~ 198 (966)
.+ +..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++ .+|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 22 355566666666666665555555666666666666666 4443 24444555666666666666 55442 344
Q ss_pred ccccCC-cceEEEccCC--CCC-CCCCcCccCCCCCCEEEeeccc-ccccCCcCCCCCCccceEeccccccCCCCCh---
Q 002105 199 EIGQLR-NLKWIYLGYN--NLS-GEIPKEIGDLTSLNHLDLVYNN-LTGQIPPSFGNLSNLRYLFLYQNKLTGSIPK--- 270 (966)
Q Consensus 199 ~l~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~--- 270 (966)
.+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+.++++|++|++++|. +..+.
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~ 266 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLL 266 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHH
Confidence 455555 5666666655 333 2334444455555555555555 444444455555555555555553 11122
Q ss_pred hhhcCCCCCEEEccCC
Q 002105 271 SILGLKSLVSFDLSDN 286 (966)
Q Consensus 271 ~l~~l~~L~~L~Ls~N 286 (966)
.+.++++|+.|++++|
T Consensus 267 ~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 267 ELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGGGCTTCCEEECTTS
T ss_pred HHhcCCCCCEEeccCc
Confidence 3445555555555555
No 334
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=1.5e-23 Score=247.27 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=141.4
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCccc--------ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT--------TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE 761 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~--------~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E 761 (966)
.+|+|+||.||++. ..+..+|+|+........ .+.+.+|+..+.+ ++|||||++..++..++..|+|||
T Consensus 343 ~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~-l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 343 LIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLAL-VKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -----CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHH-GGGGTCCCCCEEEEETTTTEEEEE
T ss_pred EEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHh-cCCCCcCceEEEEEeCCccEEEEE
Confidence 46899999999994 578889999876532211 2336788888888 699999977666667778899999
Q ss_pred ccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC------
Q 002105 762 YIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS------ 835 (966)
Q Consensus 762 y~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~------ 835 (966)
||+||+|.++++. +..++.|+++||+||| +.+|+||||||+|||++. .+++.|||++.....
T Consensus 420 ~~~ggsL~~~l~~-----~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 420 YINGKLAKDVIED-----NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCCSEEHHHHSTT-----CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCCHHHHHHH-----HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC----eEEEEECccCEECCCcccccc
Confidence 9999999999976 6789999999999999 458999999999999996 689999999876432
Q ss_pred -------CCcCCcccccccccCC--CCCCCcchHHHHHHHHHHHHcCCCCCC
Q 002105 836 -------KSINSSAYVAPETKES--KDITEKGDIYGFGLILIDLLTGKSPAD 878 (966)
Q Consensus 836 -------~~~~~~~y~aPE~~~~--~~~~~~~Dv~S~Gv~l~el~tg~~p~~ 878 (966)
...||+.|||||++.. ..|+.++|+||..+-.+|.+.++.+|.
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3468999999999876 678889999999999999988887763
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=7.8e-24 Score=238.37 Aligned_cols=255 Identities=19% Similarity=0.183 Sum_probs=132.4
Q ss_pred eEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCc----hhhcCCC-CCceecccCCCCCCCCCCCCCCC-----CC
Q 002105 256 YLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIP----EEVIQLQ-NLEILHLFSNNFTGKIPSSLASM-----PK 325 (966)
Q Consensus 256 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l-----~~ 325 (966)
+++++.|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|+.|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677777777777766666668888888888776655 5566666 67777777777766555545443 66
Q ss_pred ccEEEccCCcCcccCCccc----cCC-CCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCcccc-CccCc
Q 002105 326 LQVLQLWSNQFSGEIPSNL----GKQ-NNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLST-CKSLR 399 (966)
Q Consensus 326 L~~L~L~~N~l~~~~p~~~----~~~-~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~-l~~L~ 399 (966)
|++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++..+..+.. .+.. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------------------~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ--------------------AFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH--------------------HHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH--------------------HHHhCCCcee
Confidence 7777777777665544433 223 56666666666665543332211 1111 13455
Q ss_pred eeeccccccCCcCC----hhhcCCC-cccEEcccCCCCCCccCcchhc----c-CCCcEecCCCCcCCccC----CC-Cc
Q 002105 400 RVRLQNNRLSGELS----SEFTRLP-LVYFLDISGNDLSGRIGEQKWE----M-TSLQMLNLAGNNFSGKL----PD-SF 464 (966)
Q Consensus 400 ~L~L~~N~l~~~~~----~~~~~l~-~L~~LdLs~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~----p~-~~ 464 (966)
+|+|++|++++..+ ..+..++ +|++|+|++|++++..+..+.. . ++|++|+|++|.+++.. +. +.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 55555555443222 2223333 5555555555554443333222 2 35555555555554311 11 11
Q ss_pred C-cccccccccccccccccCC----CcccCcCCCCEEEccCCccCCCCh-------hhccccccccccccCCceeccc
Q 002105 465 G-SDQLENLDLSENRFSGTIP----RSFGRLSELMQLKISRNKLFGDIP-------EELSSCKKLVSLDLSNNQLSGH 530 (966)
Q Consensus 465 ~-~~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p-------~~~~~l~~L~~L~Ls~N~l~~~ 530 (966)
. .++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++.+.
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 1 1244455555554443322 223444555555555555433322 2334455555555555555444
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=4.3e-22 Score=219.06 Aligned_cols=203 Identities=24% Similarity=0.257 Sum_probs=132.8
Q ss_pred CCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCC----hhhcCCCccc
Q 002105 348 NNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELS----SEFTRLPLVY 423 (966)
Q Consensus 348 ~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~ 423 (966)
++|+.|++++|.+++..|..+.. ..+++|++|+|++|++++..+ ..+..+++|+
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~----------------------~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~ 148 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLE----------------------ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLK 148 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSS----------------------CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCC
T ss_pred CceeEEEeeCCEeccchhhhhhh----------------------ccCCCCCEEEeecccccchhhhhHHHHhhhccCCC
Confidence 44666666666665555544400 445555555555555554433 2334556666
Q ss_pred EEcccCCCCCCccCcchhccCCCcEecCCCCcCCcc---CCCC--cCcccccccccccccccccC--CC-cccCcCCCCE
Q 002105 424 FLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGK---LPDS--FGSDQLENLDLSENRFSGTI--PR-SFGRLSELMQ 495 (966)
Q Consensus 424 ~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~--~~~~~L~~L~Ls~N~l~~~~--p~-~~~~l~~L~~ 495 (966)
+|++++|++.+..+..+..+++|++|+|++|++.+. .+.. ..+++|++|+|++|+++... +. .+..+++|++
T Consensus 149 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~ 228 (310)
T 4glp_A 149 VLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHS 228 (310)
T ss_dssp EEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSS
T ss_pred EEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCE
Confidence 666666666665555666666666666666665542 2221 24567777777777775221 11 2467788888
Q ss_pred EEccCCccCCCChhhcccc---ccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcC
Q 002105 496 LKISRNKLFGDIPEELSSC---KKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISH 572 (966)
Q Consensus 496 L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~ 572 (966)
|+|++|++.+.+|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|||++|++++. |. +..+++|+.|++++
T Consensus 229 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 229 LDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDG 303 (310)
T ss_dssp EECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSS
T ss_pred EECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcC
Confidence 8888888888777777766 58888899999888 6777664 7889999999999874 33 56778889999999
Q ss_pred Ccccc
Q 002105 573 NHFHG 577 (966)
Q Consensus 573 N~l~g 577 (966)
|+++.
T Consensus 304 N~l~~ 308 (310)
T 4glp_A 304 NPFLV 308 (310)
T ss_dssp TTTSC
T ss_pred CCCCC
Confidence 98863
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=8.1e-24 Score=240.56 Aligned_cols=246 Identities=20% Similarity=0.306 Sum_probs=169.1
Q ss_pred CCCCCCCCCCccEEEccCCcCcccCC----ccccCCCCCcEEEccCCc---ccccCCCCccCCCCccEEEccCCCCCCCC
Q 002105 316 IPSSLASMPKLQVLQLWSNQFSGEIP----SNLGKQNNLTVIDLSTNF---LTGKIPETLCDSGSLFKLILFSNSLEGKI 388 (966)
Q Consensus 316 ~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~~~~L~~L~Ls~N~---l~~~~p~~~~~~~~L~~L~l~~N~l~~~~ 388 (966)
++..+..+++|+.|+|++|.+....+ ..+..+++|+.|+|++|. +++.+|..+.. +
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~-----------------l 86 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL-----------------L 86 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH-----------------H
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH-----------------H
Confidence 44455566777777777777765433 335567777777777753 33333332210 0
Q ss_pred CCccccCccCceeeccccccCC----cCChhhcCCCcccEEcccCCCCCCccCcchh----cc---------CCCcEecC
Q 002105 389 PNSLSTCKSLRRVRLQNNRLSG----ELSSEFTRLPLVYFLDISGNDLSGRIGEQKW----EM---------TSLQMLNL 451 (966)
Q Consensus 389 p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~----~l---------~~L~~L~L 451 (966)
...+..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|
T Consensus 87 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L 166 (386)
T 2ca6_A 87 LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIIC 166 (386)
T ss_dssp HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEC
T ss_pred HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEEC
Confidence 0112455666666666666665 3455566666666666666666543333222 22 67777777
Q ss_pred CCCcCC-ccCCC----CcCccccccccccccccc--c---cCCCcccCcCCCCEEEccCCccC----CCChhhccccccc
Q 002105 452 AGNNFS-GKLPD----SFGSDQLENLDLSENRFS--G---TIPRSFGRLSELMQLKISRNKLF----GDIPEELSSCKKL 517 (966)
Q Consensus 452 s~N~l~-~~~p~----~~~~~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L 517 (966)
++|+++ +.+|. +..+++|++|++++|+++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|
T Consensus 167 ~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L 246 (386)
T 2ca6_A 167 GRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246 (386)
T ss_dssp CSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTC
T ss_pred CCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCc
Confidence 777776 33332 224467788888888776 3 35557888999999999999986 6788899999999
Q ss_pred cccccCCceeccc----cCccC--CCCCCCcEEeCCCCcCcc----cCCccc-ccCCCCCeeeCcCCccccc
Q 002105 518 VSLDLSNNQLSGH----IPASL--SEMPVLGQLDLSENQLSG----KIPQTL-GRVASLVQVNISHNHFHGS 578 (966)
Q Consensus 518 ~~L~Ls~N~l~~~----~p~~l--~~l~~L~~LdLs~N~l~g----~~p~~l-~~l~~L~~l~ls~N~l~g~ 578 (966)
+.|+|++|.+++. +|..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|++++|++++.
T Consensus 247 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 9999999999876 56666 448999999999999998 588877 6689999999999998754
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=3.1e-23 Score=231.04 Aligned_cols=255 Identities=18% Similarity=0.253 Sum_probs=137.6
Q ss_pred CCCEEEcCCCCCccccChhhhhcC--CCCcEEECCCCCCCCCCC-CCCCCCCcEEeCCCCCCCCc-CCCCcCCCCCcCEE
Q 002105 86 HVESINLSSNQLSGEIPSDIFSSS--NSLRFLNLSNNNFTGPVP-IGSLSRLEILDLSNNMLSGK-IPEEIGSFSGLKVL 161 (966)
Q Consensus 86 ~L~~L~Ls~N~l~g~ip~~~~~~l--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 161 (966)
.++.+|+++|.+. +..+..+ +.+++|++++|.+.+..+ ...+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~----~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH----PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC----HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC----HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4778888888775 2333433 677777777777776433 35566677777777666544 55556666666666
Q ss_pred EccCCCCcccCCcCCCCCCCCCEEEccCC-CCcc-cCCcccccCCcceEEEccCC-CCCCC-CCcCccCCC-CCCEEEee
Q 002105 162 DLGGNVLVGEIPLSISNITSLQIFTLASN-QLIG-SIPREIGQLRNLKWIYLGYN-NLSGE-IPKEIGDLT-SLNHLDLV 236 (966)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~-~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~Ls 236 (966)
+|++|.+.+..|..++.+++|++|++++| .+++ .++..+..+++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 66666666555555666666666666666 4443 24444555555555555555 44432 233344444 55555555
Q ss_pred cccccccCCcCCCCCCccceEeccccccC-CCCChhhhcCCCCCEEEccCCc-CcccCchhhcCCCCCceecccCCC-CC
Q 002105 237 YNNLTGQIPPSFGNLSNLRYLFLYQNKLT-GSIPKSILGLKSLVSFDLSDNY-LSGEIPEEVIQLQNLEILHLFSNN-FT 313 (966)
Q Consensus 237 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~ 313 (966)
+|.+ .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.
T Consensus 204 ~~~~----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 204 GYRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp SCGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred CCcc----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 5421 222 2233444445555555555555 444444455555555555555553 11
Q ss_pred CCCCCCCCCCCCccEEEccCCcCcccCCccccCC-CCCcEEEccCCcccccCCCCccC
Q 002105 314 GKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQ-NNLTVIDLSTNFLTGKIPETLCD 370 (966)
Q Consensus 314 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 370 (966)
......+..+++|+.|++++| ++.. .+..+ .++..|++++|.+++..|..+..
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 111113455666666666665 2211 12222 12445556777777766665543
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=2.9e-21 Score=203.91 Aligned_cols=196 Identities=19% Similarity=0.190 Sum_probs=105.8
Q ss_pred CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCC-CcccCCcCCCCCCCCCEEEccC-CCCcccCCcccccCCcceEEE
Q 002105 133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNV-LVGEIPLSISNITSLQIFTLAS-NQLIGSIPREIGQLRNLKWIY 210 (966)
Q Consensus 133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~ 210 (966)
+|++|+|++|++++..+..|..+++|++|++++|. +....+..|.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 34444444444444444455556666666666664 5444444555566666666665 555554455555666666666
Q ss_pred ccCCCCCCCCCcCccCCCCCC---EEEeecc-cccccCCcCCCCCCccc-eEeccccccCCCCChhhhcCCCCCEEEccC
Q 002105 211 LGYNNLSGEIPKEIGDLTSLN---HLDLVYN-NLTGQIPPSFGNLSNLR-YLFLYQNKLTGSIPKSILGLKSLVSFDLSD 285 (966)
Q Consensus 211 L~~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 285 (966)
+++|.+++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++ .+|......++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 66666654 444 55555555 6666666 66655555566666666 6666666665 2333222225566666666
Q ss_pred Cc-CcccCchhhcCC-CCCceecccCCCCCCCCCCCCCCCCCccEEEccCC
Q 002105 286 NY-LSGEIPEEVIQL-QNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSN 334 (966)
Q Consensus 286 N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 334 (966)
|. +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 63 554444455555 5555555555555532 222 3445555555443
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=9.5e-22 Score=231.61 Aligned_cols=209 Identities=25% Similarity=0.409 Sum_probs=126.0
Q ss_pred CCCCCCCCCCC-----cccce-eeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCc
Q 002105 40 LSNWDSSVTFC-----KWNGI-SCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLR 113 (966)
Q Consensus 40 l~~w~~~~~~c-----~w~gv-~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~ 113 (966)
+.+|..+.++| .|.|+ .|.. ++++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .|| ..+++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip----~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP----ELPASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC----CCCTTCC
T ss_pred HHHHhccCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc----cccCCCC
Confidence 44575555677 79999 6853 356667777777665 454442 56666666666665 455 1234555
Q ss_pred EEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCc
Q 002105 114 FLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLI 193 (966)
Q Consensus 114 ~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 193 (966)
+|+|++|.|++ +|. +.. +|++|+|++|.+++ +|. .+++|++|++++|.++
T Consensus 104 ~L~Ls~N~l~~-----------------------ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 104 YLDACDNRLST-----------------------LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT 153 (571)
T ss_dssp EEECCSSCCSC-----------------------CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred EEEccCCCCCC-----------------------cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC
Confidence 55555555544 333 332 45555555555444 333 3455555555555555
Q ss_pred ccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCcc-------ceEeccccccCC
Q 002105 194 GSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNL-------RYLFLYQNKLTG 266 (966)
Q Consensus 194 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~L~~n~l~~ 266 (966)
+ +|. .+++|++|+|++|.+++ +|. |. ++|++|+|++|+|+ .+|. |.. +| +.|+|++|+++
T Consensus 154 ~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~- 220 (571)
T 3cvr_A 154 M-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT- 220 (571)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-
T ss_pred c-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-
Confidence 4 333 34556666666666654 444 44 66666666666666 4554 443 55 88888888887
Q ss_pred CCChhhhcCCCCCEEEccCCcCcccCchhhcCCC
Q 002105 267 SIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQ 300 (966)
Q Consensus 267 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 300 (966)
.+|..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 221 ~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 221 HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 4677777788888888888888888887776543
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.85 E-value=2.1e-21 Score=213.61 Aligned_cols=204 Identities=20% Similarity=0.187 Sum_probs=116.0
Q ss_pred CCCcEEeCCCCCCCCcCCCCc--CCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEE
Q 002105 132 SRLEILDLSNNMLSGKIPEEI--GSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWI 209 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 209 (966)
++|++|+|++|.+++..|..+ ..+++|++|+|++|.+.+..|.. ....+..+++|++|
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~--------------------~~~~~~~~~~L~~L 150 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWL--------------------AELQQWLKPGLKVL 150 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSH--------------------HHHHTTBCSCCCEE
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhh--------------------HHHHhhhccCCCEE
Confidence 345555555555555555554 55555555555555554322200 00223345566666
Q ss_pred EccCCCCCCCCCcCccCCCCCCEEEeeccccccc--C--CcCCCCCCccceEeccccccCCCCCh----hhhcCCCCCEE
Q 002105 210 YLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQ--I--PPSFGNLSNLRYLFLYQNKLTGSIPK----SILGLKSLVSF 281 (966)
Q Consensus 210 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~n~l~~~~p~----~l~~l~~L~~L 281 (966)
+|++|.+++..|..|+.+++|++|++++|++.+. + +..++++++|++|+|++|+++. ++. .+.++++|++|
T Consensus 151 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L 229 (310)
T 4glp_A 151 SIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSL 229 (310)
T ss_dssp EEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSE
T ss_pred EeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEE
Confidence 6666666655556666666666666666665431 1 2233566777777777777652 222 24566777777
Q ss_pred EccCCcCcccCchhhcCC---CCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCC
Q 002105 282 DLSDNYLSGEIPEEVIQL---QNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTN 358 (966)
Q Consensus 282 ~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N 358 (966)
+|++|.+++..|..+..+ ++|+.|++++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|+|++|
T Consensus 230 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 230 DLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGN 304 (310)
T ss_dssp ECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSST
T ss_pred ECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCC
Confidence 777777766656555554 46666666666666 4455443 5666666666666643 22 445566666666666
Q ss_pred ccc
Q 002105 359 FLT 361 (966)
Q Consensus 359 ~l~ 361 (966)
.++
T Consensus 305 ~l~ 307 (310)
T 4glp_A 305 PFL 307 (310)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=8.5e-24 Score=240.40 Aligned_cols=246 Identities=21% Similarity=0.275 Sum_probs=180.9
Q ss_pred cCchhhcCCCCCceecccCCCCCCC----CCCCCCCCCCccEEEccCC---cCcccCCccc-------cCCCCCcEEEcc
Q 002105 291 EIPEEVIQLQNLEILHLFSNNFTGK----IPSSLASMPKLQVLQLWSN---QFSGEIPSNL-------GKQNNLTVIDLS 356 (966)
Q Consensus 291 ~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N---~l~~~~p~~~-------~~~~~L~~L~Ls 356 (966)
.++..+..+++|+.|+|++|.++.. ++..+..+++|++|+|++| ++++.+|..+ ..+++|+.|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 4567788899999999999999865 3345788999999999996 4556666555 577788888888
Q ss_pred CCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhc----CC---------Cccc
Q 002105 357 TNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFT----RL---------PLVY 423 (966)
Q Consensus 357 ~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l---------~~L~ 423 (966)
+|.+++.-.. .+|..+..+++|++|+|++|.+++..+..+. .+ ++|+
T Consensus 103 ~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQE--------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHH--------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHH--------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCc
Confidence 8877652000 1233444555666666666666533332222 22 6777
Q ss_pred EEcccCCCCC-CccC---cchhccCCCcEecCCCCcCC--c---cCC-CCcCccccccccccccccc----ccCCCcccC
Q 002105 424 FLDISGNDLS-GRIG---EQKWEMTSLQMLNLAGNNFS--G---KLP-DSFGSDQLENLDLSENRFS----GTIPRSFGR 489 (966)
Q Consensus 424 ~LdLs~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~--~---~~p-~~~~~~~L~~L~Ls~N~l~----~~~p~~~~~ 489 (966)
+|++++|+++ +.++ ..+..+++|++|+|++|.++ | ..| .+..+++|+.|+|++|.++ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 7777777776 3333 34556778888888888877 3 344 3456678888899999886 567888899
Q ss_pred cCCCCEEEccCCccCCC----Chhhcc--ccccccccccCCceecc----ccCccC-CCCCCCcEEeCCCCcCcccCC
Q 002105 490 LSELMQLKISRNKLFGD----IPEELS--SCKKLVSLDLSNNQLSG----HIPASL-SEMPVLGQLDLSENQLSGKIP 556 (966)
Q Consensus 490 l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~LdLs~N~l~g~~p 556 (966)
+++|+.|+|++|++++. +|..+. .+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999999876 566764 48999999999999998 588777 668999999999999998764
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=5.6e-21 Score=201.70 Aligned_cols=195 Identities=16% Similarity=0.166 Sum_probs=124.6
Q ss_pred CcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCC-CcccCCcccccCCcceEEEccC-CCCCCCCCcCccCCCCCCEEE
Q 002105 157 GLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQ-LIGSIPREIGQLRNLKWIYLGY-NNLSGEIPKEIGDLTSLNHLD 234 (966)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 234 (966)
+|++|++++|.+++..+..|.++++|++|++++|+ ++...+..|.++++|++|++++ |.+++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78888888888877666677778888888888886 6665556777777777777777 777755556677777777777
Q ss_pred eecccccccCCcCCCCCCccc---eEecccc-ccCCCCChhhhcCCCCC-EEEccCCcCcccCchhhcCCCCCceecccC
Q 002105 235 LVYNNLTGQIPPSFGNLSNLR---YLFLYQN-KLTGSIPKSILGLKSLV-SFDLSDNYLSGEIPEEVIQLQNLEILHLFS 309 (966)
Q Consensus 235 Ls~N~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 309 (966)
+++|.+++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++++|.++ .+|......++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 77777775 554 66666666 7777777 66655555566666666 6666666666 3333322225566666666
Q ss_pred CC-CCCCCCCCCCCC-CCccEEEccCCcCcccCCccccCCCCCcEEEccC
Q 002105 310 NN-FTGKIPSSLASM-PKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLST 357 (966)
Q Consensus 310 N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~ 357 (966)
|. +++..+..|.++ ++|+.|++++|++++ +|.. .+.+|+.|++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 63 554444555555 555555555555553 2222 344455555544
No 344
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=5e-23 Score=231.73 Aligned_cols=155 Identities=17% Similarity=0.124 Sum_probs=86.8
Q ss_pred EEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCC----cccccCC-cceEEEccCCCCCCCCCcCccCC-----CC
Q 002105 160 VLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIP----REIGQLR-NLKWIYLGYNNLSGEIPKEIGDL-----TS 229 (966)
Q Consensus 160 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l-----~~ 229 (966)
+++|+.|.+++.+|..+...++|++|++++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35667777777777666666667777777777665554 4555566 66677777666665555555443 66
Q ss_pred CCEEEeecccccccCCcCCC----CC-CccceEeccccccCCCCChhhhc-----CCCCCEEEccCCcCcccCc----hh
Q 002105 230 LNHLDLVYNNLTGQIPPSFG----NL-SNLRYLFLYQNKLTGSIPKSILG-----LKSLVSFDLSDNYLSGEIP----EE 295 (966)
Q Consensus 230 L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~~~p----~~ 295 (966)
|++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+..+.. .++|++|+|++|.+++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 66666666666654444322 22 55666666666665544433322 2456666666665553222 22
Q ss_pred hcCCC-CCceecccCCCCCC
Q 002105 296 VIQLQ-NLEILHLFSNNFTG 314 (966)
Q Consensus 296 ~~~l~-~L~~L~L~~N~l~~ 314 (966)
+..++ +|+.|+|++|++++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGG
T ss_pred HhcCCccccEeeecCCCCch
Confidence 22332 44444544444443
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=2.3e-20 Score=198.59 Aligned_cols=179 Identities=26% Similarity=0.253 Sum_probs=99.6
Q ss_pred CCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCC
Q 002105 111 SLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASN 190 (966)
Q Consensus 111 ~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 190 (966)
..++++++++.++. +|.+-.++|++|+|++|.+++..+..|..+++|++|+|++|.+.+..|..|.++++|++|++++|
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CCeEEecCCCCccc-cCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 45566666666653 33333356666666666666655556666666666666666666555555556666666666666
Q ss_pred CCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCCh
Q 002105 191 QLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPK 270 (966)
Q Consensus 191 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 270 (966)
++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|+++++|++|+|++|++++..+.
T Consensus 94 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 94 QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 65555445555555555555555555544444455555555555555555544444455555555555555555544444
Q ss_pred hhhcCCCCCEEEccCCcCcc
Q 002105 271 SILGLKSLVSFDLSDNYLSG 290 (966)
Q Consensus 271 ~l~~l~~L~~L~Ls~N~l~~ 290 (966)
.+..+++|+.|++++|.+..
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCT
T ss_pred HHhCCCCCCEEEeeCCceeC
Confidence 45555555555555555443
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=3.5e-21 Score=211.30 Aligned_cols=193 Identities=24% Similarity=0.361 Sum_probs=94.2
Q ss_pred CCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceE
Q 002105 129 GSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKW 208 (966)
Q Consensus 129 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 208 (966)
..+++|++|++++|.++. +| .+..+++|++|+|++|.+.+..+ +.++++|++|++++|++.+. +.+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 334455555555555542 22 34555555555555555543322 55555555555555555432 23455555555
Q ss_pred EEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcC
Q 002105 209 IYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYL 288 (966)
Q Consensus 209 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 288 (966)
|++++|.+++ ++ .+..+++|++|++++|.+++..+ ++++++|++|++++|++++. +. +..+++|+.|++++|.+
T Consensus 112 L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCcc
Confidence 5555555543 22 25555555555555555553222 45555555555555555432 22 45555555555555555
Q ss_pred cccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCc
Q 002105 289 SGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFS 337 (966)
Q Consensus 289 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 337 (966)
++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 43322 4444455555555555443321 444555555555555544
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=5.5e-21 Score=209.80 Aligned_cols=193 Identities=25% Similarity=0.380 Sum_probs=95.7
Q ss_pred CCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEE
Q 002105 83 HLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLD 162 (966)
Q Consensus 83 ~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 162 (966)
.+++|++|++++|.+. .+|. +..+++|++|+|++|.+++..++..+++|++|+|++|.+++. + .+..+++|++|+
T Consensus 39 ~l~~L~~L~l~~~~i~-~l~~--~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLD 113 (308)
T ss_dssp HHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEE
T ss_pred HcCCcCEEEeeCCCcc-Cchh--hhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEE
Confidence 4555666666666655 3442 334455555555555555433345555555555555555432 2 344555555555
Q ss_pred ccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccc
Q 002105 163 LGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTG 242 (966)
Q Consensus 163 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 242 (966)
|++|.+.+. | .+..+++|++|++++|.+++..+ ++.+++|++|++++|++++
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--------------------------l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--------------------------LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--------------------------GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--------------------------ccCCCCccEEEccCCcCCC
Confidence 555554432 1 14444444444444444443221 4444455555555555443
Q ss_pred cCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCC
Q 002105 243 QIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTG 314 (966)
Q Consensus 243 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 314 (966)
. +. +.++++|++|++++|++++..+ +..+++|++|++++|.+++.. .+..+++|+.|++++|.+++
T Consensus 166 ~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 L-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp C-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred C-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 2 22 4455555555555555543222 455555555555555555433 24555556666666655543
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=4.9e-20 Score=217.01 Aligned_cols=188 Identities=27% Similarity=0.368 Sum_probs=158.9
Q ss_pred CCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCC
Q 002105 111 SLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASN 190 (966)
Q Consensus 111 ~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 190 (966)
+|++|+|++|.+++ +|..-+++|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|++++|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N 130 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNN 130 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSS
T ss_pred CccEEEeCCCCCCc-cCHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCC
Confidence 78888888888876 55444578999999999998 566 457999999999999997 777 666 9999999999
Q ss_pred CCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCCh
Q 002105 191 QLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPK 270 (966)
Q Consensus 191 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 270 (966)
++++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|++++ +|. |. ++|++|+|++|+++ .+|.
T Consensus 131 ~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 131 QLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC
T ss_pred cCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh
Confidence 9997 666 68999999999999986 666 57899999999999997 777 66 89999999999998 5666
Q ss_pred hhhcCCCC-------CEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCC
Q 002105 271 SILGLKSL-------VSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMP 324 (966)
Q Consensus 271 ~l~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 324 (966)
+.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|.+++.+|..+..++
T Consensus 198 -~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 198 -VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp -CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred -HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 554 77 99999999998 5788888899999999999999998887766543
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.6e-20 Score=206.44 Aligned_cols=221 Identities=19% Similarity=0.169 Sum_probs=121.9
Q ss_pred CccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCC-CCccCCCCccE-EEccCCCCCCCCCCccccCccCceee
Q 002105 325 KLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIP-ETLCDSGSLFK-LILFSNSLEGKIPNSLSTCKSLRRVR 402 (966)
Q Consensus 325 ~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~ 402 (966)
++++|+|++|+++...+..|..+++|+.|+|++|.+.+.+| ..|.+++++.. +.+.+|+++...|..|..+++|++|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 34444444444443333344444445555555554433333 23344444433 34445555555566666667777777
Q ss_pred ccccccCCcCChhhcCCCcccEEcccC-CCCCCccCcchhcc-CCCcEecCCCCcCCccCCCCcCccccccccccc-ccc
Q 002105 403 LQNNRLSGELSSEFTRLPLVYFLDISG-NDLSGRIGEQKWEM-TSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSE-NRF 479 (966)
Q Consensus 403 L~~N~l~~~~~~~~~~l~~L~~LdLs~-N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~-N~l 479 (966)
+++|++.+..+..+.....+..|++++ |++....+..+..+ ..++.|+|++|+|+...+..|...+|+.|++++ |.+
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l 190 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNL 190 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTC
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcc
Confidence 777777666666666666666676654 45554444444444 346677777777776555566666677777764 444
Q ss_pred cccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCC
Q 002105 480 SGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSEN 549 (966)
Q Consensus 480 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N 549 (966)
+...+..|..+++|+.|||++|+|+...+..+.++++|+.+++.+ ++ .+| .+..+++|+.++++++
T Consensus 191 ~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~--l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 191 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN--LK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCTT--CC-CCC-CTTTCCSCCEEECSCH
T ss_pred cCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCCC--cC-cCC-CchhCcChhhCcCCCC
Confidence 433334566777777777777776655444555555555544422 22 344 2555566666666544
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=7e-20 Score=188.82 Aligned_cols=61 Identities=31% Similarity=0.341 Sum_probs=25.4
Q ss_pred CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCc
Q 002105 133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLI 193 (966)
Q Consensus 133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 193 (966)
+|++|+|++|.+++..+..|..+++|++|+|++|.+.+..+..|.++++|++|++++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 89 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC
Confidence 4444444444444333333444444444444444444333333333444444444444333
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=6.7e-20 Score=205.12 Aligned_cols=197 Identities=18% Similarity=0.099 Sum_probs=98.0
Q ss_pred CEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC--CCCCCCCCcEEeCCCCCCCCcCC-CCcCCCCCcCE-EEc
Q 002105 88 ESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV--PIGSLSRLEILDLSNNMLSGKIP-EEIGSFSGLKV-LDL 163 (966)
Q Consensus 88 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L 163 (966)
++++.++|+++ .||..+. +++++|+|++|+|+... .+.++++|++|+|++|++.+.+| ..|.++++|+. +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~---~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC---TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC---CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 56777778877 6776542 45666666666665321 24555555555555555544333 34455555443 344
Q ss_pred cCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccC-CCCCCCCCcCccCCC-CCCEEEeeccccc
Q 002105 164 GGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGY-NNLSGEIPKEIGDLT-SLNHLDLVYNNLT 241 (966)
Q Consensus 164 ~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~ 241 (966)
++|++....|..|.++++|++|++++|++....+..+....++..|++.+ +.+....+..|..+. .++.|++++|+++
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 44555554455555555555555555555544444444444455555533 333322233343332 3455555555555
Q ss_pred ccCCcCCCCCCccceEeccc-cccCCCCChhhhcCCCCCEEEccCCcCc
Q 002105 242 GQIPPSFGNLSNLRYLFLYQ-NKLTGSIPKSILGLKSLVSFDLSDNYLS 289 (966)
Q Consensus 242 ~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 289 (966)
. +|.......+|++|++.+ |.++...+..|.++++|++||+++|+++
T Consensus 168 ~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 168 E-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp E-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred C-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 3 222222334455555543 3333222234455555555555555554
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=2.1e-19 Score=185.20 Aligned_cols=181 Identities=25% Similarity=0.242 Sum_probs=144.4
Q ss_pred cEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCC
Q 002105 135 EILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYN 214 (966)
Q Consensus 135 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N 214 (966)
+.++.+++.++. +|..+ .++|++|++++|.+.+..+..|.++++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 567777777763 45443 468999999999998777777888999999999999988766667788889999999999
Q ss_pred CCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCch
Q 002105 215 NLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPE 294 (966)
Q Consensus 215 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 294 (966)
.+++..+..|.++++|++|++++|++++..+..|.++++|++|++++|++++..+..+..+++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88876666788888888898888888876666788888888888888888876666688888888888888876643
Q ss_pred hhcCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002105 295 EVIQLQNLEILHLFSNNFTGKIPSSLASMPK 325 (966)
Q Consensus 295 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 325 (966)
+++|+.|+++.|+++|.+|.+++.++.
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 456788888888888888877776654
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=3.9e-20 Score=226.01 Aligned_cols=206 Identities=23% Similarity=0.222 Sum_probs=77.2
Q ss_pred cHHHHHHHHHHhhcCCCC-CCCCCCCCCC-CCCCcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCC
Q 002105 19 HGAELELLLSFKSTVNDP-YNFLSNWDSS-VTFCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQ 96 (966)
Q Consensus 19 ~~~~~~~Ll~~k~~~~~~-~~~l~~w~~~-~~~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~ 96 (966)
.+.++++|+++..+.... ...-..|... +..+.|.++++.. ++++.|+|..+++...
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-------------------- 188 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEA-------------------- 188 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcc--------------------
Confidence 355678888887665311 1223456433 4567888887754 4566666666655531
Q ss_pred CccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCC
Q 002105 97 LSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSI 176 (966)
Q Consensus 97 l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 176 (966)
+. ..|+.++|+.|.|. .++++.|.+. ..|+.+..+++|++|+|++|.+. .+|..+
T Consensus 189 -----~~------~~l~~l~Ls~~~i~------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~ 243 (727)
T 4b8c_D 189 -----NQ------ALLQHKKLSQYSID------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANI 243 (727)
T ss_dssp ---------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGG
T ss_pred -----hh------hHhhcCccCccccc------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhh
Confidence 11 12333334433332 2334444443 44555566666666666666655 444445
Q ss_pred CCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccce
Q 002105 177 SNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRY 256 (966)
Q Consensus 177 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 256 (966)
.++++|++|+|++|.++ .+|..|+++++|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..|+++++|++
T Consensus 244 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~ 320 (727)
T 4b8c_D 244 FKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQF 320 (727)
T ss_dssp GGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCC
T ss_pred cCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccE
Confidence 55555555555555555 45555555556666666666555 45555555555555555555554 44555555555555
Q ss_pred EeccccccCCCCChhhh
Q 002105 257 LFLYQNKLTGSIPKSIL 273 (966)
Q Consensus 257 L~L~~n~l~~~~p~~l~ 273 (966)
|+|++|.+++.+|..+.
T Consensus 321 L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 321 LGVEGNPLEKQFLKILT 337 (727)
T ss_dssp EECTTSCCCSHHHHHHH
T ss_pred EeCCCCccCCCChHHHh
Confidence 55555555555554443
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=5.1e-18 Score=177.52 Aligned_cols=163 Identities=24% Similarity=0.307 Sum_probs=91.1
Q ss_pred CCCCCCCCCcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCC
Q 002105 42 NWDSSVTFCKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNN 121 (966)
Q Consensus 42 ~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 121 (966)
-|..+.+.|+|.+|.|+.. +++ .+|..+. ++|++|+|++|+|++ +++..|..+++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~-----------~l~-~ip~~~~--~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSK-----------RHA-SVPAGIP--TNAQILYLHDNQITK-LEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTS-----------CCS-SCCSCCC--TTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCC-----------CcC-ccCCCCC--CCCCEEEcCCCccCc-cCHHHhhCccCCcEEECCCCC
Confidence 3444568899999999643 222 3333332 667777777777774 433444444555555555555
Q ss_pred CCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccc
Q 002105 122 FTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIG 201 (966)
Q Consensus 122 l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 201 (966)
|+ +..+..|..+++|++|+|++|.+++..+..|..+++|++|++++|+++ .+|..+.
T Consensus 76 l~----------------------~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 132 (229)
T 3e6j_A 76 LG----------------------ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIE 132 (229)
T ss_dssp CC----------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGG
T ss_pred CC----------------------CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccc
Confidence 54 333334445555555555555555444444455555555555555555 3455555
Q ss_pred cCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccc
Q 002105 202 QLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTG 242 (966)
Q Consensus 202 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 242 (966)
.+++|++|+|++|.+++..+..|..+++|++|++++|.+..
T Consensus 133 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 133 RLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp GCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 55666666666666654444555666666666666666554
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.2e-18 Score=179.13 Aligned_cols=137 Identities=20% Similarity=0.217 Sum_probs=114.7
Q ss_pred CCcEecCCCCcCCccCCC--CcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhcccccccccccc
Q 002105 445 SLQMLNLAGNNFSGKLPD--SFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDL 522 (966)
Q Consensus 445 ~L~~L~Ls~N~l~~~~p~--~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 522 (966)
.++.|+|++|++++..|. +..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 345666666666665443 235667777788888887777778889999999999999999888888999999999999
Q ss_pred CCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCC
Q 002105 523 SNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 523 s~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++.++.
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 99999988899999999999999999999998899999999999999999999887653
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=5.1e-19 Score=210.77 Aligned_cols=171 Identities=22% Similarity=0.316 Sum_probs=78.4
Q ss_pred cCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEE
Q 002105 82 FHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVL 161 (966)
Q Consensus 82 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 161 (966)
..|++|+.|+|++|.+. .+|. +..+++|++|+|++|.+++..++..+++|++|+|++|.+++ +| .+..+++|++|
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred hcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 34555555555555554 3332 33445555555555555544444555555555555555543 12 34445555555
Q ss_pred EccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeeccccc
Q 002105 162 DLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLT 241 (966)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 241 (966)
+|++|.+.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|+++
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 5555544431 2244444444444444444432 334444444444444444443322 444444444444444444
Q ss_pred ccCCcCCCCCCccceEeccccccC
Q 002105 242 GQIPPSFGNLSNLRYLFLYQNKLT 265 (966)
Q Consensus 242 ~~~p~~~~~l~~L~~L~L~~n~l~ 265 (966)
+. +.+..+++|+.|+|++|++.
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEE
T ss_pred CC--hHHccCCCCCEEEccCCcCc
Confidence 31 22344444444444444443
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=1.2e-18 Score=207.71 Aligned_cols=187 Identities=23% Similarity=0.353 Sum_probs=81.6
Q ss_pred CCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCC
Q 002105 87 VESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGN 166 (966)
Q Consensus 87 L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 166 (966)
+..++++.+.+...++ ...+++|+.|+|++|.+....++..+++|++|+|++|.+++..| +..+++|+.|+|++|
T Consensus 23 l~~l~l~~~~i~~~~~---~~~L~~L~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT---QNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHHTTCSCTTSEEC---HHHHTTCCCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHHhccCCCcccccc---hhcCCCCCEEECcCCCCCCChHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 3344455555443222 12335555555555555543334445555555555555554322 445555555555555
Q ss_pred CCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCc
Q 002105 167 VLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPP 246 (966)
Q Consensus 167 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 246 (966)
.+.+ +| .+..+++|+.|+|++|.+.+. +.+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|.+++..|
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 5443 11 344444444444444444431 2344444444444444444432 234444444444444444443222
Q ss_pred CCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcC
Q 002105 247 SFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYL 288 (966)
Q Consensus 247 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 288 (966)
+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEE
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcC
Confidence 33444444444444444321 1233334444444444433
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=1.1e-18 Score=189.59 Aligned_cols=161 Identities=25% Similarity=0.352 Sum_probs=72.0
Q ss_pred CCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccC
Q 002105 117 LSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSI 196 (966)
Q Consensus 117 Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 196 (966)
+..+.+++..+...+++|++|++++|.++.. + .+..+++|++|+|++|.+.+..+ +.++++|++|++++|.+++ +
T Consensus 31 l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~ 105 (291)
T 1h6t_A 31 LKKKSVTDAVTQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L 105 (291)
T ss_dssp TTCSCTTSEECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G
T ss_pred hcCCCcccccchhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C
Confidence 3333333333333444455555555554432 2 24445555555555555543322 4455555555555555443 1
Q ss_pred CcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCC
Q 002105 197 PREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLK 276 (966)
Q Consensus 197 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 276 (966)
+.+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|++|++++|++++..+ +..++
T Consensus 106 -~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~ 178 (291)
T 1h6t_A 106 -SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLT 178 (291)
T ss_dssp -GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred -hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCC
Confidence 1244445555555555544431 2344444445555544444432 334444444444444444443222 44444
Q ss_pred CCCEEEccCCcCc
Q 002105 277 SLVSFDLSDNYLS 289 (966)
Q Consensus 277 ~L~~L~Ls~N~l~ 289 (966)
+|+.|++++|.++
T Consensus 179 ~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 179 KLQNLYLSKNHIS 191 (291)
T ss_dssp TCCEEECCSSCCC
T ss_pred ccCEEECCCCcCC
Confidence 4444444444443
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=6.5e-18 Score=175.49 Aligned_cols=133 Identities=21% Similarity=0.207 Sum_probs=70.2
Q ss_pred CcEEeCCCCCCCCcCC-CCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 134 LEILDLSNNMLSGKIP-EEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 134 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
+++|+|++|++++..| ..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3444444444444322 234555555555555555554444455555555555555555555444445555555555555
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCC
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTG 266 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 266 (966)
+|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+..
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 555555555555555555555555555555555555555555555555555543
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=3.8e-18 Score=191.59 Aligned_cols=176 Identities=23% Similarity=0.194 Sum_probs=84.8
Q ss_pred CEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcC-CCCCcCEEEccCC
Q 002105 88 ESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIG-SFSGLKVLDLGGN 166 (966)
Q Consensus 88 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N 166 (966)
+++++++|++. .+|..+. ..+++|+|++|+|+ +..+..+. .+++|++|+|++|
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~----------------------~l~~~~~~~~l~~L~~L~L~~N 74 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLS----------------------RLRAEWTPTRLTNLHSLLLSHN 74 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCC----------------------EECTTSSSSCCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCC----------------------ccChhhhhhcccccCEEECCCC
Confidence 46778877776 5665432 33555555555554 33333333 4444444444444
Q ss_pred CCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCc
Q 002105 167 VLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPP 246 (966)
Q Consensus 167 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 246 (966)
.+.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+.
T Consensus 75 ~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 75 HLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred cCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 44444334444444444444444444443334444444444444444444444444455555555555555555432222
Q ss_pred CC---CCCCccceEeccccccCCCCChhhhcCCC--CCEEEccCCcCc
Q 002105 247 SF---GNLSNLRYLFLYQNKLTGSIPKSILGLKS--LVSFDLSDNYLS 289 (966)
Q Consensus 247 ~~---~~l~~L~~L~L~~n~l~~~~p~~l~~l~~--L~~L~Ls~N~l~ 289 (966)
.| .++++|++|+|++|++++..+..+..++. |+.|+|++|.+.
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 22 34555555555555555443344444444 245555555543
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=4.3e-18 Score=184.97 Aligned_cols=169 Identities=24% Similarity=0.380 Sum_probs=92.0
Q ss_pred CCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccC
Q 002105 110 NSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLAS 189 (966)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 189 (966)
++|++|++++|.++....+..+++|++|+|++|++++..+ +..+++|++|+|++|.+.+ +| .+..+++|++|++++
T Consensus 46 ~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 4444444444444433223444555555555555543322 5555555555555555543 12 255555555555555
Q ss_pred CCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC
Q 002105 190 NQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP 269 (966)
Q Consensus 190 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 269 (966)
|++++. +.+..+++|++|++++|.+++. ..++.+++|++|++++|++++..| +..+++|++|++++|++++ ++
T Consensus 122 n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~ 194 (291)
T 1h6t_A 122 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR 194 (291)
T ss_dssp SCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG
T ss_pred CcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch
Confidence 555542 3455566666666666666543 456666666666666666664333 6666666666666666654 23
Q ss_pred hhhhcCCCCCEEEccCCcCcc
Q 002105 270 KSILGLKSLVSFDLSDNYLSG 290 (966)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~ 290 (966)
.+..+++|+.|++++|.++.
T Consensus 195 -~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 195 -ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GGTTCTTCSEEEEEEEEEEC
T ss_pred -hhccCCCCCEEECcCCcccC
Confidence 35666666666666666653
No 362
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.75 E-value=2.2e-19 Score=193.79 Aligned_cols=141 Identities=20% Similarity=0.097 Sum_probs=109.0
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc------------------cccchHHHHHHHHhhcCCCceeEEeeE
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI------------------TTSSFWPDVSQFGKLIMHPNIVRLHGV 749 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~------------------~~~~~~~e~~~~~~~~~H~niv~l~g~ 749 (966)
...+|+|++|.||+|+. .+|..||+|.+...... ....+.+|+..+.+ ++ | +++.++
T Consensus 95 ~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~-l~--~-~~v~~~ 169 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK-LQ--G-LAVPKV 169 (282)
T ss_dssp EEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH-TT--T-SSSCCE
T ss_pred cCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh-cc--C-CCcCeE
Confidence 35678999999999998 88999999998532211 12346788888877 45 5 666665
Q ss_pred EecCCeeEEEEEccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccc
Q 002105 750 CRSEKAAYLVYEYIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGL 829 (966)
Q Consensus 750 ~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~ 829 (966)
+.. +..|+|||||+||+|.+ +. ......++.|+++||+||| +.+|+||||||+|||++ ...+++.|||+
T Consensus 170 ~~~-~~~~lvmE~~~g~~L~~-l~---~~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~---~~~vkl~DFG~ 238 (282)
T 1zar_A 170 YAW-EGNAVLMELIDAKELYR-VR---VENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS---EEGIWIIDFPQ 238 (282)
T ss_dssp EEE-ETTEEEEECCCCEEGGG-CC---CSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE---TTEEEECCCTT
T ss_pred Eec-cceEEEEEecCCCcHHH-cc---hhhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE---CCcEEEEECCC
Confidence 543 55699999999999988 42 2345579999999999999 55999999999999999 35689999998
Q ss_pred ceecCCCCcCCcccccccccCC
Q 002105 830 AYCTDSKSINSSAYVAPETKES 851 (966)
Q Consensus 830 ~~~~~~~~~~~~~y~aPE~~~~ 851 (966)
+.. +..|+|||++..
T Consensus 239 a~~-------~~~~~a~e~l~r 253 (282)
T 1zar_A 239 SVE-------VGEEGWREILER 253 (282)
T ss_dssp CEE-------TTSTTHHHHHHH
T ss_pred CeE-------CCCCCHHHHHHH
Confidence 853 456899998743
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=1.6e-17 Score=172.62 Aligned_cols=132 Identities=22% Similarity=0.281 Sum_probs=62.8
Q ss_pred CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
+|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 34444444444444444445555555555555555554444445555555555555554443333334444444444444
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEecccccc
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKL 264 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l 264 (966)
+|.+++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 4444444444444444444444444444444444444444444444444444
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=2e-17 Score=171.86 Aligned_cols=153 Identities=25% Similarity=0.277 Sum_probs=127.1
Q ss_pred cEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCC
Q 002105 135 EILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYN 214 (966)
Q Consensus 135 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N 214 (966)
+.+++++|.++ .+|..+. ++|++|+|++|.+.+..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57888888887 4666554 68999999999998877778889999999999999998888888888899999999999
Q ss_pred CCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcc
Q 002105 215 NLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSG 290 (966)
Q Consensus 215 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 290 (966)
.++...+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|++++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 8886555667888888888888888888778888888888888888888887777778888888888888887753
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=9.6e-18 Score=188.34 Aligned_cols=177 Identities=25% Similarity=0.246 Sum_probs=134.7
Q ss_pred CcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCC-CCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 134 LEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSIS-NITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 134 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
-+++++++|.++. +|..+. +.++.|+|++|.+++..+..+. ++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 3678888888874 666554 4588999999999887777777 88999999999999988777888888888888888
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhh---hcCCCCCEEEccCCcCc
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSI---LGLKSLVSFDLSDNYLS 289 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l---~~l~~L~~L~Ls~N~l~ 289 (966)
+|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..| ..+++|+.|+|++|.++
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 888887667778888888888888888887778888888888888888888876444444 45777777777777777
Q ss_pred ccCchhhcCCCCC--ceecccCCCCC
Q 002105 290 GEIPEEVIQLQNL--EILHLFSNNFT 313 (966)
Q Consensus 290 ~~~p~~~~~l~~L--~~L~L~~N~l~ 313 (966)
+..+..+..++.+ +.|+|++|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 5555555555542 45555555443
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=4.4e-17 Score=170.38 Aligned_cols=134 Identities=31% Similarity=0.379 Sum_probs=83.6
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 211 (966)
++|++|+|++|.+++..|..|..+++|++|+|++|.+....+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 56666666666666666666777777777777777765544455666666666666666666555555566666666666
Q ss_pred cCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCC
Q 002105 212 GYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTG 266 (966)
Q Consensus 212 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 266 (966)
++|.++ .+|..+..+++|++|+|++|++++..+..|..+++|++|++++|.+..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 666665 455555666666666666666655444455555556666665555543
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=2.5e-20 Score=220.76 Aligned_cols=202 Identities=21% Similarity=0.162 Sum_probs=100.7
Q ss_pred CCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCce
Q 002105 321 ASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRR 400 (966)
Q Consensus 321 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 400 (966)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|......|.. +..+.+.+.+|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 45677777777777775 56777777777777777655321111100 0011122334444555555555
Q ss_pred ee-ccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCcccccccccccccc
Q 002105 401 VR-LQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRF 479 (966)
Q Consensus 401 L~-L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l 479 (966)
|+ ++.|.+ ..|..+.+++|.++...+ ..|+.|+|++|.|++ +|.+..+++|+.|+|++|.|
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcCccccccCcEeecCcccc
Confidence 55 444432 123334444444432211 135555555555554 23333444555555555555
Q ss_pred cccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceecccc-CccCCCCCCCcEEeCCCCcCcccC
Q 002105 480 SGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHI-PASLSEMPVLGQLDLSENQLSGKI 555 (966)
Q Consensus 480 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~LdLs~N~l~g~~ 555 (966)
+ .+|..|+.+++|+.|+|++|++++ +| .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|++++.+
T Consensus 476 ~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 476 R-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp C-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred c-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 4 444455555555555555555554 34 4555555555555555555444 555555555555555555555443
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=2.7e-18 Score=209.84 Aligned_cols=196 Identities=23% Similarity=0.262 Sum_probs=125.2
Q ss_pred CCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccC
Q 002105 110 NSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLAS 189 (966)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 189 (966)
+.++.|+|++|.+... ....|+.++|+.|.|.+ ++++.|.+. ..|..+..+++|+.|+|++
T Consensus 173 ~~~~~l~L~~n~~~~~----~~~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~ 233 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA----NQALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSN 233 (727)
T ss_dssp --------------------------------------------------------------------CCCCCCEEECTT
T ss_pred CccceEEeeCCCCCcc----hhhHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEECCC
Confidence 4466667766666541 12345666677666553 345556655 5678899999999999999
Q ss_pred CCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC
Q 002105 190 NQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP 269 (966)
Q Consensus 190 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 269 (966)
|.+. .+|..++.+++|++|+|++|.++ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|
T Consensus 234 n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp 309 (727)
T 4b8c_D 234 LQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLP 309 (727)
T ss_dssp SCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCC
T ss_pred CCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccC
Confidence 9998 68888889999999999999999 89999999999999999999999 78999999999999999999997 678
Q ss_pred hhhhcCCCCCEEEccCCcCcccCchhhcCCCC-CceecccCCCCCCCCCCCCCCCCCccEEEccCC
Q 002105 270 KSILGLKSLVSFDLSDNYLSGEIPEEVIQLQN-LEILHLFSNNFTGKIPSSLASMPKLQVLQLWSN 334 (966)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 334 (966)
..|+++++|++|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 310 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 310 WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 88999999999999999999999888765432 335789999999888864 445666666
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2e-17 Score=168.66 Aligned_cols=154 Identities=18% Similarity=0.317 Sum_probs=80.9
Q ss_pred cCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEE
Q 002105 82 FHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVL 161 (966)
Q Consensus 82 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 161 (966)
..+++|++|++++|.+. .+| . +..+++|++|++++|.++... .+..+++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~-l~~l~~L~~L~l~~n~~~~~~------------------------~l~~l~~L~~L 93 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-G-IEYAHNIKDLTINNIHATNYN------------------------PISGLSNLERL 93 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-T-GGGCTTCSEEEEESCCCSCCG------------------------GGTTCTTCCEE
T ss_pred hhcCCccEEeccCCCcc-ChH-H-HhcCCCCCEEEccCCCCCcch------------------------hhhcCCCCCEE
Confidence 34455666666666665 444 2 333455555555555444332 44455555555
Q ss_pred EccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeeccccc
Q 002105 162 DLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLT 241 (966)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 241 (966)
++++|.+.+..|..++.+++|++|++++|++++..|..++.+++|++|++++|.+.+.+| .+..+++|++|++++|.++
T Consensus 94 ~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 94 RIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCC
T ss_pred EeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCc
Confidence 555555554445555555555555555555555455555555555555555555222333 4555666666666666665
Q ss_pred ccCCcCCCCCCccceEeccccccC
Q 002105 242 GQIPPSFGNLSNLRYLFLYQNKLT 265 (966)
Q Consensus 242 ~~~p~~~~~l~~L~~L~L~~n~l~ 265 (966)
+ ++ .+..+++|++|++++|++.
T Consensus 173 ~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 173 D-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp C-CT-TGGGCSSCCEEEECBC---
T ss_pred C-hH-HhccCCCCCEEEeeCcccC
Confidence 4 22 4556666666666666654
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=9.7e-18 Score=179.27 Aligned_cols=167 Identities=22% Similarity=0.276 Sum_probs=79.0
Q ss_pred CCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccC
Q 002105 86 HVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGG 165 (966)
Q Consensus 86 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 165 (966)
++..+++++|.+. .++ .+..+++|++|++++|.++....+..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 20 ~l~~l~l~~~~i~-~~~--~~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 20 NAVKQNLGKQSVT-DLV--SQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHHTCSCTT-SEE--CHHHHTTCSEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHHhcCCCcc-ccc--chhhcCcCcEEECcCCCcccchHHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 3444445555444 222 123334555555555554432233444555555555555543322 55555555555555
Q ss_pred CCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCC
Q 002105 166 NVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIP 245 (966)
Q Consensus 166 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 245 (966)
|.+++. |. +.. ++|++|++++|++++. +.+..+++|++|++++|.+++. + .+..+++|++|++++|++++.
T Consensus 95 N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 95 NRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 555432 21 111 4555555555555432 2345555555555555555432 2 345555555555555555543
Q ss_pred cCCCCCCccceEeccccccCC
Q 002105 246 PSFGNLSNLRYLFLYQNKLTG 266 (966)
Q Consensus 246 ~~~~~l~~L~~L~L~~n~l~~ 266 (966)
..+..+++|++|++++|+++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEEC
T ss_pred HHhccCCCCCEEeCCCCcccC
Confidence 345555555555555555543
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=2.9e-19 Score=211.70 Aligned_cols=204 Identities=18% Similarity=0.106 Sum_probs=123.4
Q ss_pred cCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCce
Q 002105 225 GDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEI 304 (966)
Q Consensus 225 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 304 (966)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|......|..+ ..+.+.+.+|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhccc
Confidence 34555666666666665 456666666666666665443110011000 011244566677777777777
Q ss_pred ec-ccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCC
Q 002105 305 LH-LFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNS 383 (966)
Q Consensus 305 L~-L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~ 383 (966)
|+ ++.|.+ .+|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. +..+++|+.|++++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 77 555543 345555666666654222 136777777777775 454 6666677777777777
Q ss_pred CCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCcc-CcchhccCCCcEecCCCCcCCccCCC
Q 002105 384 LEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRI-GEQKWEMTSLQMLNLAGNNFSGKLPD 462 (966)
Q Consensus 384 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~ 462 (966)
++ .+|..+..+++|+.|+|++|+|++ +| .+..+++|++|+|++|++++.. |..+..+++|+.|+|++|.+++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 66 566677777777777777777776 34 6677777777777777777665 66666677777777777766655443
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=4.3e-17 Score=166.27 Aligned_cols=156 Identities=17% Similarity=0.240 Sum_probs=134.3
Q ss_pred CCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcc
Q 002105 127 PIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNL 206 (966)
Q Consensus 127 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 206 (966)
..+.+++|++|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3356678888888888887 456 6889999999999999664 33478999999999999999998889999999999
Q ss_pred eEEEccCCCCCCCCCcCccCCCCCCEEEeeccc-ccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccC
Q 002105 207 KWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNN-LTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSD 285 (966)
Q Consensus 207 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 285 (966)
++|++++|.+++..|..++.+++|++|++++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|++|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 999999999998888899999999999999998 55 455 68999999999999999986 34 789999999999999
Q ss_pred CcCcc
Q 002105 286 NYLSG 290 (966)
Q Consensus 286 N~l~~ 290 (966)
|.+.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 99864
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=9.4e-17 Score=171.60 Aligned_cols=167 Identities=22% Similarity=0.297 Sum_probs=143.0
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCC
Q 002105 63 VNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNN 142 (966)
Q Consensus 63 v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N 142 (966)
++.++++.+.++... .+..+++|++|++++|++. .+| .+..+++|++|+|++|++++..++..+++|++|+|++|
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCC
Confidence 445667777777544 5788999999999999998 677 35667999999999999998767899999999999999
Q ss_pred CCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCc
Q 002105 143 MLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPK 222 (966)
Q Consensus 143 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 222 (966)
++++ +|.. .. ++|++|+|++|.+++. + .+.++++|+.|++++|++++. + .++.+++|++|++++|.+++. .
T Consensus 96 ~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~ 166 (263)
T 1xeu_A 96 RLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--G 166 (263)
T ss_dssp CCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--T
T ss_pred ccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--H
Confidence 9986 4443 33 9999999999999864 3 589999999999999999874 3 689999999999999999876 6
Q ss_pred CccCCCCCCEEEeeccccccc
Q 002105 223 EIGDLTSLNHLDLVYNNLTGQ 243 (966)
Q Consensus 223 ~l~~l~~L~~L~Ls~N~l~~~ 243 (966)
.+..+++|++|++++|.+.+.
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECC
T ss_pred HhccCCCCCEEeCCCCcccCC
Confidence 799999999999999999865
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=5.6e-17 Score=164.59 Aligned_cols=132 Identities=23% Similarity=0.384 Sum_probs=97.0
Q ss_pred cEecCCCCcCCccCCC-CcCcccccccccccccccccCCC-cccCcCCCCEEEccCCccCCCChhhccccccccccccCC
Q 002105 447 QMLNLAGNNFSGKLPD-SFGSDQLENLDLSENRFSGTIPR-SFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSN 524 (966)
Q Consensus 447 ~~L~Ls~N~l~~~~p~-~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (966)
+.+++++|.++. +|. ++ .+|++|++++|++++..+. .|..+++|+.|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 445555555542 333 22 2567777777777665554 477788888888888888877788888888888888888
Q ss_pred ceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCC
Q 002105 525 NQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 525 N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
|+|++..|..|..+++|+.|+|++|++++.+|..+..+++|++|++++|+++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 888877777788888888888888888888888888888888888888888877663
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=1.1e-15 Score=154.93 Aligned_cols=87 Identities=25% Similarity=0.335 Sum_probs=39.9
Q ss_pred CCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEE
Q 002105 131 LSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIY 210 (966)
Q Consensus 131 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 210 (966)
+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|++|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred ccCCCCC
Q 002105 211 LGYNNLS 217 (966)
Q Consensus 211 L~~N~l~ 217 (966)
|++|.++
T Consensus 133 L~~N~l~ 139 (192)
T 1w8a_A 133 LASNPFN 139 (192)
T ss_dssp CTTCCBC
T ss_pred eCCCCcc
Confidence 4444443
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=7.6e-16 Score=170.53 Aligned_cols=280 Identities=11% Similarity=0.062 Sum_probs=144.4
Q ss_pred CCCCCEEEcCCCCCccccChh---hhhc-CCCCcEEECCCCCCCC-CCCCCCCCCCcEEeCCCCCCCCcCCCCcCC----
Q 002105 84 LPHVESINLSSNQLSGEIPSD---IFSS-SNSLRFLNLSNNNFTG-PVPIGSLSRLEILDLSNNMLSGKIPEEIGS---- 154 (966)
Q Consensus 84 l~~L~~L~Ls~N~l~g~ip~~---~~~~-l~~L~~L~Ls~N~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 154 (966)
+++++.|+++++ +... .+.. +++|++|||++|++.. ..+.+.++.++.+++..|.+ .+..|.+
T Consensus 24 ~~~l~~L~l~g~-----i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 24 ANSITHLTLTGK-----LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHCSEEEEEEE-----ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEE---CTTTTEEEETT
T ss_pred hCceeEEEEecc-----ccHHHHHHHHHhhccCeEEecCcceeEEecCcccccccccccccccccc---CHHHhcccccc
Confidence 667888888753 3221 1222 5778888888888772 11123333345555555532 2345555
Q ss_pred ----CCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCC----CCCCCCcCccC
Q 002105 155 ----FSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNN----LSGEIPKEIGD 226 (966)
Q Consensus 155 ----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~----l~~~~p~~l~~ 226 (966)
+++|+.|+|.. .++..-+..|.++++|+.++++.|.+....+..|..+.++..+.+..+. ........|.+
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 77777777777 5665555667777777777777777666666666666666655554421 11122233444
Q ss_pred CCCCC-EEEeecccccccCCcC----CCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhh-cCCC
Q 002105 227 LTSLN-HLDLVYNNLTGQIPPS----FGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEV-IQLQ 300 (966)
Q Consensus 227 l~~L~-~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 300 (966)
+..|+ .+++.... .++.. -....+++.+.+.++ -.. .....+ ..++
T Consensus 175 ~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~------------------------l~~-~~~~~l~~~~~ 226 (329)
T 3sb4_A 175 GEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGK------------------------LDN-ADFKLIRDYMP 226 (329)
T ss_dssp SCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEEC------------------------CCH-HHHHHHHHHCT
T ss_pred ccccceeEEecCCC---cHHHHHhhcccCccccceEEEeee------------------------ecH-HHHHHHHHhcC
Confidence 44444 33332211 11110 011223333333322 111 000111 1244
Q ss_pred CCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCc-EEEccCCcccccCCCCccCCCCccEEEc
Q 002105 301 NLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLT-VIDLSTNFLTGKIPETLCDSGSLFKLIL 379 (966)
Q Consensus 301 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~~~~L~~L~l 379 (966)
+|+.++|++|+++...+..|.++++|+.++|.+| ++...+..|..+.+|+ .+++.+ .++...+..|..+.+|+.+++
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 5555555555554444445555555555555554 4434444555555555 555555 444444555666666666666
Q ss_pred cCCCCCCCCCCccccCccCceee
Q 002105 380 FSNSLEGKIPNSLSTCKSLRRVR 402 (966)
Q Consensus 380 ~~N~l~~~~p~~~~~l~~L~~L~ 402 (966)
++|+++...+.+|.+|++|+.++
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCccCccchhhhcCCcchhhhc
Confidence 66666655566677777777665
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=7.2e-16 Score=170.75 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=57.7
Q ss_pred ccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhcccccccc-ccccCCceeccccCccCCCCCCCcEEe
Q 002105 467 DQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLV-SLDLSNNQLSGHIPASLSEMPVLGQLD 545 (966)
Q Consensus 467 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~Ld 545 (966)
++|+.++|++|+++...+..|.++.+|+.|+|++| +....+.+|.+|++|+ .+++++ .++...+..|.++++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 34555555555555444455555666666666555 4444455566666666 666655 45544455666666666666
Q ss_pred CCCCcCcccCCcccccCCCCCeee
Q 002105 546 LSENQLSGKIPQTLGRVASLVQVN 569 (966)
Q Consensus 546 Ls~N~l~g~~p~~l~~l~~L~~l~ 569 (966)
+++|+++..-+..|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 666666655555666666666554
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=3.1e-15 Score=148.22 Aligned_cols=135 Identities=24% Similarity=0.286 Sum_probs=86.9
Q ss_pred CCCCCCcEEeCCCCCCC-CcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcce
Q 002105 129 GSLSRLEILDLSNNMLS-GKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLK 207 (966)
Q Consensus 129 ~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 207 (966)
...++|++|+|++|.++ +.+|..+..+++|++|+|++|.+.+. ..+..+++|++|++++|++++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 33466777777777776 56777777777777777777777654 5666777777777777777666666666666777
Q ss_pred EEEccCCCCCCCC-CcCccCCCCCCEEEeecccccccCC---cCCCCCCccceEeccccccC
Q 002105 208 WIYLGYNNLSGEI-PKEIGDLTSLNHLDLVYNNLTGQIP---PSFGNLSNLRYLFLYQNKLT 265 (966)
Q Consensus 208 ~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~n~l~ 265 (966)
+|++++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777776665421 1456666666666666666654333 24555666666666665554
No 379
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.58 E-value=1.8e-15 Score=161.18 Aligned_cols=136 Identities=11% Similarity=0.018 Sum_probs=100.1
Q ss_pred ccccCCCCCccEEEEEEEecCCcE--EEEEEEeccCcc-c-----------------------ccchHHHHHHHHhhcCC
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQ--FVVKKIIDVNTI-T-----------------------TSSFWPDVSQFGKLIMH 740 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~--vavk~~~~~~~~-~-----------------------~~~~~~e~~~~~~~~~H 740 (966)
....+|+|++|.||+|....+|.. ||||.+...... . ...+.+|+..+.+ ++|
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~~ 129 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER-AKE 129 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH-HHH
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH-HHh
Confidence 345578999999999998778988 999986432110 0 0135677777777 577
Q ss_pred Cce--eEEeeEEecCCeeEEEEEccCC-C----CHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEE
Q 002105 741 PNI--VRLHGVCRSEKAAYLVYEYIEG-K----ELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVI 813 (966)
Q Consensus 741 ~ni--v~l~g~~~~~~~~~lv~Ey~~~-g----~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nil 813 (966)
++| ...+++ +..++||||+.+ | +|.++....++.....++.|++.||+|||. ..+||||||||+|||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NIL 203 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIM 203 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEE
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEE
Confidence 653 334432 356899999952 4 787776555566778999999999999993 238999999999999
Q ss_pred EcCCCCceEEEeccccceec
Q 002105 814 VDGKDEPHLRLSVPGLAYCT 833 (966)
Q Consensus 814 l~~~~~~~~~~~~~~~~~~~ 833 (966)
++. .+++.|||++...
T Consensus 204 l~~----~~~liDFG~a~~~ 219 (258)
T 1zth_A 204 YID----KVYFIDMGQAVTL 219 (258)
T ss_dssp ESS----SEEECCCTTCEET
T ss_pred EcC----cEEEEECcccccC
Confidence 986 6789999998643
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=6.2e-15 Score=149.48 Aligned_cols=131 Identities=20% Similarity=0.312 Sum_probs=108.8
Q ss_pred cEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCce
Q 002105 447 QMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQ 526 (966)
Q Consensus 447 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (966)
+.+++++|.++. +|... ..+|++|+|++|.++ .+|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~-~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI-PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSS-CCSCC-CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCc-CCCCC-CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 355666666653 33311 146888888888887 667888999999999999999998888899999999999999999
Q ss_pred eccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCC
Q 002105 527 LSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLP 580 (966)
Q Consensus 527 l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip 580 (966)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 998888899999999999999999998777789999999999999999987544
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=6.2e-15 Score=147.39 Aligned_cols=133 Identities=20% Similarity=0.266 Sum_probs=107.2
Q ss_pred cEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCce
Q 002105 447 QMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQ 526 (966)
Q Consensus 447 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (966)
+.+++++|.++....... ++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 456666666654322222 568888888888887767778888999999999999987777778899999999999999
Q ss_pred eccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCC
Q 002105 527 LSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPS 581 (966)
Q Consensus 527 l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~ 581 (966)
+++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|+++|.+|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9987777788899999999999999977777778899999999999999887763
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=9.9e-15 Score=144.52 Aligned_cols=131 Identities=22% Similarity=0.213 Sum_probs=55.8
Q ss_pred CCCCEEEccCCCCc-ccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEe
Q 002105 180 TSLQIFTLASNQLI-GSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLF 258 (966)
Q Consensus 180 ~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 258 (966)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 33444444444443 33344444444444444444444432 3344444444444444444443444444444444444
Q ss_pred ccccccCCCC-ChhhhcCCCCCEEEccCCcCcccCc---hhhcCCCCCceecccCCCC
Q 002105 259 LYQNKLTGSI-PKSILGLKSLVSFDLSDNYLSGEIP---EEVIQLQNLEILHLFSNNF 312 (966)
Q Consensus 259 L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l 312 (966)
+++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 4444444321 1334444444444444444443322 2344444444444444443
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=2.6e-15 Score=145.53 Aligned_cols=126 Identities=23% Similarity=0.255 Sum_probs=65.9
Q ss_pred CCCcEEeCCCCCCC-CcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEE
Q 002105 132 SRLEILDLSNNMLS-GKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIY 210 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 210 (966)
++|++|++++|.++ +.+|..+..+++|++|++++|.+.+. ..++++++|++|++++|.+++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45566666666665 45565666666666666666665543 4455555555555555555554555444555555555
Q ss_pred ccCCCCCCC-CCcCccCCCCCCEEEeecccccccCC---cCCCCCCccceEec
Q 002105 211 LGYNNLSGE-IPKEIGDLTSLNHLDLVYNNLTGQIP---PSFGNLSNLRYLFL 259 (966)
Q Consensus 211 L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L 259 (966)
+++|.+++. .+..++.+++|++|++++|.+++..+ ..+..+++|++|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 555555431 12344444444455544444443322 23444444444443
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=3.7e-14 Score=141.70 Aligned_cols=109 Identities=25% Similarity=0.189 Sum_probs=46.1
Q ss_pred CCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEc
Q 002105 132 SRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYL 211 (966)
Q Consensus 132 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 211 (966)
++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|++++|++++..+..+..+++|++|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34444555555544443444445555555555555544333333444444444444444444333333333444444444
Q ss_pred cCCCCCCCCCcCccCCCCCCEEEeecccc
Q 002105 212 GYNNLSGEIPKEIGDLTSLNHLDLVYNNL 240 (966)
Q Consensus 212 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 240 (966)
++|.+++..+..+..+++|++|++++|.+
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 44444322222233333333333333333
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=5e-15 Score=143.48 Aligned_cols=126 Identities=22% Similarity=0.228 Sum_probs=66.2
Q ss_pred CCcCEEEccCCCCc-ccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEE
Q 002105 156 SGLKVLDLGGNVLV-GEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLD 234 (966)
Q Consensus 156 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 234 (966)
++|+.|++++|.+. +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666665 55565556666666666666665543 4455555555555555555544444444455555555
Q ss_pred eeccccccc-CCcCCCCCCccceEeccccccCCCCC---hhhhcCCCCCEEEc
Q 002105 235 LVYNNLTGQ-IPPSFGNLSNLRYLFLYQNKLTGSIP---KSILGLKSLVSFDL 283 (966)
Q Consensus 235 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~L 283 (966)
+++|.+++. .+..++++++|++|++++|++++..+ ..+..+++|+.|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 555555432 22344444445555555554443333 23444444444444
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=4.1e-14 Score=143.42 Aligned_cols=107 Identities=29% Similarity=0.393 Sum_probs=49.6
Q ss_pred CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
+|++|+|++|.++ .+|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444444 344455555555555555555554444444455555555555444444444444444444444444
Q ss_pred CCCCCCCCCcCccCCCCCCEEEeecccc
Q 002105 213 YNNLSGEIPKEIGDLTSLNHLDLVYNNL 240 (966)
Q Consensus 213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 240 (966)
+|.++...+..|..+++|++|++++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 4444433223344444444444444433
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=1.1e-12 Score=148.31 Aligned_cols=264 Identities=15% Similarity=0.121 Sum_probs=199.0
Q ss_pred CCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCC--CCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEE
Q 002105 84 LPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFT--GPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVL 161 (966)
Q Consensus 84 l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 161 (966)
...++.+.+.+ .++ .|+..+|.. .+|+.++|..| ++ +...|.+ .+|+.+++.. .++..-+..|.++++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~-~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVK-SIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCC-EECTTTTTT-CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccC-EehHhhccc-CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCee
Confidence 46677777764 355 688888887 47888888776 44 2334555 3688888886 6776667788889999999
Q ss_pred EccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeeccccc
Q 002105 162 DLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLT 241 (966)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 241 (966)
+|+.|.+.......|. ..+|+.+.+..+ +...-...|.++++|+.+++..| ++..-..+|.+ .+|+.+.+. ++++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc
Confidence 9988888755555555 588999998744 66666778888889999998875 44444556777 789999994 5566
Q ss_pred ccCCcCCCCCCccceEeccccccC-----CCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCC
Q 002105 242 GQIPPSFGNLSNLRYLFLYQNKLT-----GSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKI 316 (966)
Q Consensus 242 ~~~p~~~~~l~~L~~L~L~~n~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 316 (966)
..-+..|.++++|+.+++.+|.+. ...+..|.++++|+.+++.+ .++..-...|.++.+|+.+.|..| ++...
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 666778899999999999887764 34566788999999999984 476666778888999999999654 66556
Q ss_pred CCCCCCCCCccEEEccCCcCcccCCccccCCC-CCcEEEccCCccc
Q 002105 317 PSSLASMPKLQVLQLWSNQFSGEIPSNLGKQN-NLTVIDLSTNFLT 361 (966)
Q Consensus 317 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~-~L~~L~Ls~N~l~ 361 (966)
...|.++ +|+.+++.+|.+....+..|..++ +++.|.+..+.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7788888 999999999988766666777764 7888888777654
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=5.3e-16 Score=158.27 Aligned_cols=152 Identities=21% Similarity=0.223 Sum_probs=107.6
Q ss_pred CCcccEEcccCCCCCCccCc------chhccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCC
Q 002105 419 LPLVYFLDISGNDLSGRIGE------QKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSE 492 (966)
Q Consensus 419 l~~L~~LdLs~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 492 (966)
.+.++.++++.+.++|..|. .+..+++|++|+|++|.+++ +|.+..+++|++|++++|.++ .+|..+..+++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 34445555555555554444 56666666666676666665 444445567777777777776 56667777788
Q ss_pred CCEEEccCCccCCCChhhccccccccccccCCceeccccC-ccCCCCCCCcEEeCCCCcCcccCCcc----------ccc
Q 002105 493 LMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIP-ASLSEMPVLGQLDLSENQLSGKIPQT----------LGR 561 (966)
Q Consensus 493 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~LdLs~N~l~g~~p~~----------l~~ 561 (966)
|+.|++++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 8888888888876 45 67888888888998888885433 46788888999999999888877653 778
Q ss_pred CCCCCeeeCcCCccc
Q 002105 562 VASLVQVNISHNHFH 576 (966)
Q Consensus 562 l~~L~~l~ls~N~l~ 576 (966)
+++|+.|| +|.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 88888887 55554
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.47 E-value=2e-12 Score=146.38 Aligned_cols=240 Identities=13% Similarity=0.122 Sum_probs=100.4
Q ss_pred CcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEee
Q 002105 157 GLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLV 236 (966)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 236 (966)
+|+.+.+..| +...-...|.++ +|+.+.+.. .+...-+..|.++++|+.+++..|.++......|. .++|+.+.+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 3444444433 332223334332 344444443 33333334444444444444444444422222333 3445555444
Q ss_pred cccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCC---
Q 002105 237 YNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFT--- 313 (966)
Q Consensus 237 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--- 313 (966)
.+ ++..-...|.++++|+.+++..| ++..-..+|.+ .+|+.+.+. +.++..-...|.++++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 22 33333344444555555554432 22222233333 344444442 2233233334444444444444443332
Q ss_pred --CCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCc
Q 002105 314 --GKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNS 391 (966)
Q Consensus 314 --~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~ 391 (966)
...+..|.++++|+.+.|. +.++..-...|..+.+|+.++|..| ++..-+.+
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-------------------------l~~I~~~a 341 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-------------------------VTQINFSA 341 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-------------------------CCEECTTS
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-------------------------ccEEcHHh
Confidence 1223344444444444444 2233233334444444444444322 33333445
Q ss_pred cccCccCceeeccccccCCcCChhhcCCC-cccEEcccCCC
Q 002105 392 LSTCKSLRRVRLQNNRLSGELSSEFTRLP-LVYFLDISGND 431 (966)
Q Consensus 392 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~LdLs~N~ 431 (966)
|.+| +|+.+++.+|.+....+..|.+++ .+..|.+..+.
T Consensus 342 F~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 342 FNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp SSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred CCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 5555 555555555555544445555553 44555555444
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=6.3e-14 Score=139.87 Aligned_cols=112 Identities=18% Similarity=0.198 Sum_probs=64.8
Q ss_pred ccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCc
Q 002105 79 SSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGL 158 (966)
Q Consensus 79 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 158 (966)
+.+.+.++|++|+|++|++. .+|. +....++|++|+|++|.+++...++.+++|++|+|++|.+++..+..+..+++|
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcccccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34566778888888888887 4543 444434677777777776654344556666666666666654433334555666
Q ss_pred CEEEccCCCCcccCCc--CCCCCCCCCEEEccCCCCc
Q 002105 159 KVLDLGGNVLVGEIPL--SISNITSLQIFTLASNQLI 193 (966)
Q Consensus 159 ~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~n~l~ 193 (966)
++|+|++|.+. .+|. .+..+++|++|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 66666666553 2332 3444445555555544443
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=3.8e-14 Score=141.50 Aligned_cols=131 Identities=18% Similarity=0.209 Sum_probs=88.2
Q ss_pred ccCCCcEecCCCCcCCccCCCCcCcc-cccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhcccccccccc
Q 002105 442 EMTSLQMLNLAGNNFSGKLPDSFGSD-QLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSL 520 (966)
Q Consensus 442 ~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 520 (966)
++.+|+.|++++|+++. +|.+.... +|++|++++|.+++. ..|..+++|+.|+|++|++++..|..+..+++|++|
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 34455555555555553 24433333 566666666666654 466777777778888887776555556777888888
Q ss_pred ccCCceeccccCc--cCCCCCCCcEEeCCCCcCcccCCcc----cccCCCCCeeeCcCCcccc
Q 002105 521 DLSNNQLSGHIPA--SLSEMPVLGQLDLSENQLSGKIPQT----LGRVASLVQVNISHNHFHG 577 (966)
Q Consensus 521 ~Ls~N~l~~~~p~--~l~~l~~L~~LdLs~N~l~g~~p~~----l~~l~~L~~l~ls~N~l~g 577 (966)
+|++|+++ .+|. .+..+++|+.|++++|+++ .+|.. +..++.|+.||+++|....
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88888875 4554 6777888888888888887 34553 7788888888888887653
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.43 E-value=1.2e-15 Score=155.72 Aligned_cols=153 Identities=25% Similarity=0.306 Sum_probs=119.0
Q ss_pred cCccCceeeccccccCCcCCh------hhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCC-cCc
Q 002105 394 TCKSLRRVRLQNNRLSGELSS------EFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDS-FGS 466 (966)
Q Consensus 394 ~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~ 466 (966)
....++.++++.|.+++..|. .+..+++|++|++++|++++ +| .+..+++|++|++++|.++ .+|.. ..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 345666667777777776665 77788888888888888877 45 7777888888888888887 35553 345
Q ss_pred ccccccccccccccccCCCcccCcCCCCEEEccCCccCCCCh-hhccccccccccccCCceeccccCcc----------C
Q 002105 467 DQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIP-EELSSCKKLVSLDLSNNQLSGHIPAS----------L 535 (966)
Q Consensus 467 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------l 535 (966)
++|++|++++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++.+|.. +
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 788999999998886 34 68888999999999999885433 57889999999999999998887764 7
Q ss_pred CCCCCCcEEeCCCCcCcc
Q 002105 536 SEMPVLGQLDLSENQLSG 553 (966)
Q Consensus 536 ~~l~~L~~LdLs~N~l~g 553 (966)
..+++|+.|| +|.++.
T Consensus 171 ~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHCSSCSEEC--CGGGTT
T ss_pred HhCCCcEEEC--CcccCH
Confidence 8889999987 676653
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=3.9e-13 Score=133.20 Aligned_cols=108 Identities=22% Similarity=0.300 Sum_probs=71.4
Q ss_pred cccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCC
Q 002105 470 ENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSEN 549 (966)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N 549 (966)
+.+++++|.++. +|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 445555555553 444332 56666777777776666666777777777777777777666666677777777777777
Q ss_pred cCcccCCcccccCCCCCeeeCcCCcccccCC
Q 002105 550 QLSGKIPQTLGRVASLVQVNISHNHFHGSLP 580 (966)
Q Consensus 550 ~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip 580 (966)
+|++..|..|..+++|+.|++++|++++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776666667777777777777777766554
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.42 E-value=8.3e-12 Score=141.66 Aligned_cols=217 Identities=14% Similarity=0.049 Sum_probs=84.1
Q ss_pred cccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCC
Q 002105 200 IGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLV 279 (966)
Q Consensus 200 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 279 (966)
|.++++|+.+.+..+. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... +.........|+
T Consensus 158 F~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~ 233 (394)
T 4fs7_A 158 FATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVK 233 (394)
T ss_dssp TTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCC
T ss_pred hcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCc
Confidence 4444444444443322 1122233444444544444433 22223334444445554444433221 112222233444
Q ss_pred EEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCc
Q 002105 280 SFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNF 359 (966)
Q Consensus 280 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~ 359 (966)
.+.+..+ ++..-...+..+..|+.+.+..+... .....|..+..++.+.+..+.+. ...|..+.+|+.+.+.++
T Consensus 234 ~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 234 NIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp EEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-
T ss_pred eEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-
Confidence 4444322 11122233344444444444433221 22333444444444444333211 123444444544444332
Q ss_pred ccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEccc
Q 002105 360 LTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDIS 428 (966)
Q Consensus 360 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs 428 (966)
++..-...|.++.+|+.+.+.++ ++..-..+|.+|++|+.+++..| +......+|.++++|+.+++.
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 33222333444444444444321 33222334444444444444433 333333444444444444443
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.39 E-value=1.7e-11 Score=139.11 Aligned_cols=332 Identities=14% Similarity=0.073 Sum_probs=237.4
Q ss_pred cccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCC--CCCCCCCCCCCcEEeCCCCCCCCcCCCC
Q 002105 74 SGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFT--GPVPIGSLSRLEILDLSNNMLSGKIPEE 151 (966)
Q Consensus 74 ~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 151 (966)
+.+-..+|.++.+|+.++|..+ ++ .|+..+|..+++|+.++|.++ ++ |...+..+.+|+.+.+..+ +...-...
T Consensus 60 tsIg~~AF~~c~~L~~i~lp~~-i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 60 VSIGYAAFQGCRKVTEIKIPST-VR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEECTTTTTTCTTEEEEECCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred eEhHHHHhhCCCCceEEEeCCC-cc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 3344567888999999999754 66 789999999999999999765 43 4555778888888877654 44445556
Q ss_pred cCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCC
Q 002105 152 IGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLN 231 (966)
Q Consensus 152 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 231 (966)
|.+...+......... ..-...|.++++|+.+.+..+. ...-...|.++.+|+.+.+..| +.......|.++..|+
T Consensus 136 F~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred eecccccccccCcccc--ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 6666554444433332 2334578899999999997653 3345567788889999988766 4434456788888999
Q ss_pred EEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCC
Q 002105 232 HLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNN 311 (966)
Q Consensus 232 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 311 (966)
.+.+..+... +...+...++|+.+.+..+ ++..-...+.++..|+.+.+..+... .....|..+..++.+....+.
T Consensus 212 ~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~ 287 (394)
T 4fs7_A 212 NMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI 287 (394)
T ss_dssp BCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE
T ss_pred eeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCcee
Confidence 8887766433 3344445578888888644 33334556788899999998877543 455677788888888776654
Q ss_pred CCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCc
Q 002105 312 FTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNS 391 (966)
Q Consensus 312 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~ 391 (966)
+. ...|..+.+|+.+.+..+ ++..-...|..+.+|+.++|.++ ++..-..+|.++.+|+.+.+..| ++..-..+
T Consensus 288 i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 361 (394)
T 4fs7_A 288 VP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANA 361 (394)
T ss_dssp EC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHH
Confidence 32 346778899999998755 55555678889999999999754 66666778889999999999776 66666789
Q ss_pred cccCccCceeeccccccCCcCChhhcCCCcccEE
Q 002105 392 LSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFL 425 (966)
Q Consensus 392 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 425 (966)
|.+|++|+.+++..+- . .+...|.++++|+.+
T Consensus 362 F~~C~~L~~i~lp~~~-~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 362 FQGCINLKKVELPKRL-E-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp BTTCTTCCEEEEEGGG-G-GGGGGBCTTCEEEEE
T ss_pred hhCCCCCCEEEECCCC-E-EhhheecCCCCCcEE
Confidence 9999999999998652 2 224567676666643
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=8.8e-13 Score=131.08 Aligned_cols=108 Identities=18% Similarity=0.275 Sum_probs=75.3
Q ss_pred cccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCC
Q 002105 470 ENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSEN 549 (966)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N 549 (966)
+.+++++|.++ .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 44555666554 4454443 56777777777777777777777777777777777777655556677777778888888
Q ss_pred cCcccCCcccccCCCCCeeeCcCCcccccCC
Q 002105 550 QLSGKIPQTLGRVASLVQVNISHNHFHGSLP 580 (966)
Q Consensus 550 ~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip 580 (966)
+|++..+..|..+++|+.|++++|++.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776666667777788888888887775543
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=1.1e-12 Score=130.02 Aligned_cols=109 Identities=20% Similarity=0.294 Sum_probs=91.8
Q ss_pred CcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCc
Q 002105 446 LQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNN 525 (966)
Q Consensus 446 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (966)
.+.+++++|.++. +|... ...|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~~-ip~~~-~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI-PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC-CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCc-cCccC-CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4567777777765 33321 267888999999999888889999999999999999999888888899999999999999
Q ss_pred eeccccCccCCCCCCCcEEeCCCCcCcccCC
Q 002105 526 QLSGHIPASLSEMPVLGQLDLSENQLSGKIP 556 (966)
Q Consensus 526 ~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p 556 (966)
+|++..|..|..+++|+.|+|++|+++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998777889999999999999999987644
No 398
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.37 E-value=8.7e-14 Score=153.67 Aligned_cols=140 Identities=9% Similarity=-0.043 Sum_probs=89.8
Q ss_pred ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc----c-cccch---------HHHHHHHHhhcCCCceeEEeeEE
Q 002105 685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT----I-TTSSF---------WPDVSQFGKLIMHPNIVRLHGVC 750 (966)
Q Consensus 685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~----~-~~~~~---------~~e~~~~~~~~~H~niv~l~g~~ 750 (966)
+.....+|.|++|.||+|+. .+|+.||||.+..... . ...+| ..+++..+. ..|+|+++++...
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~-kE~~nL~rL~~~g 174 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAI-KEFAFMKALYEEG 174 (397)
T ss_dssp SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHH-HHHHHHHHHHHTT
T ss_pred EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHH-HHHHHHHHHHhcC
Confidence 45556689999999999997 7899999997642210 0 01111 112222222 2455555554322
Q ss_pred ecC------CeeEEEEEccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCc----
Q 002105 751 RSE------KAAYLVYEYIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEP---- 820 (966)
Q Consensus 751 ~~~------~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~---- 820 (966)
..- ...+|||||++|++|.++.. ......++.|++.||.|||. .+||||||||.|||+++++.+
T Consensus 175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~---~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dgd~~d~~ 248 (397)
T 4gyi_A 175 FPVPEPIAQSRHTIVMSLVDALPMRQVSS---VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEKDAEDPS 248 (397)
T ss_dssp CSCCCEEEEETTEEEEECCSCEEGGGCCC---CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEECSSCTT
T ss_pred CCCCeeeeccCceEEEEecCCccHhhhcc---cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCCCccccc
Confidence 111 12369999999999876532 23345688999999999994 489999999999999865432
Q ss_pred ----eEEEecccccee
Q 002105 821 ----HLRLSVPGLAYC 832 (966)
Q Consensus 821 ----~~~~~~~~~~~~ 832 (966)
.+.+.|++.+..
T Consensus 249 ~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 249 SITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECCCTTCEE
T ss_pred ccccceEEEEeCCccc
Confidence 234666665543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.31 E-value=1.2e-11 Score=122.81 Aligned_cols=15 Identities=20% Similarity=0.448 Sum_probs=7.6
Q ss_pred CEEEcCCCCCccccCh
Q 002105 88 ESINLSSNQLSGEIPS 103 (966)
Q Consensus 88 ~~L~Ls~N~l~g~ip~ 103 (966)
+.+++++|++. .+|.
T Consensus 15 ~~l~~~~n~l~-~iP~ 29 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA 29 (174)
T ss_dssp SEEECCSSCCS-SCCS
T ss_pred cEEEeCCCCCC-ccCC
Confidence 34555555554 4444
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=3.1e-11 Score=134.38 Aligned_cols=106 Identities=22% Similarity=0.234 Sum_probs=74.9
Q ss_pred ccccccc-cccccCCCcccCcCCCCEEEccC-CccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCC
Q 002105 471 NLDLSEN-RFSGTIPRSFGRLSELMQLKISR-NKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSE 548 (966)
Q Consensus 471 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~ 548 (966)
.++++++ .++. +|. +..+++|+.|+|++ |+|.+..|..|+++++|+.|+|++|+|++..|..|..+++|+.|||++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3456665 5653 566 77777777777775 777777777777777777777777777777777777777777777777
Q ss_pred CcCcccCCcccccCCCCCeeeCcCCcccccC
Q 002105 549 NQLSGKIPQTLGRVASLVQVNISHNHFHGSL 579 (966)
Q Consensus 549 N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~i 579 (966)
|+|++..|..+..++ |+.|++++|+|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 777766655565555 777777777776553
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=1.3e-12 Score=146.47 Aligned_cols=111 Identities=18% Similarity=0.237 Sum_probs=66.9
Q ss_pred ccccccccccccccccCCCcc-----cCcCCCCEEEccCCccCC----CChhhccccccccccccCCceeccc----cCc
Q 002105 467 DQLENLDLSENRFSGTIPRSF-----GRLSELMQLKISRNKLFG----DIPEELSSCKKLVSLDLSNNQLSGH----IPA 533 (966)
Q Consensus 467 ~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 533 (966)
.+|+.|+|++|.++......+ ...++|+.|+|++|.++. .++..+..+++|++|||++|.|++. ++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 345555555555543322222 234567777777777653 2334445667777777777777643 244
Q ss_pred cCCCCCCCcEEeCCCCcCccc----CCcccccCCCCCeeeCcCCcccc
Q 002105 534 SLSEMPVLGQLDLSENQLSGK----IPQTLGRVASLVQVNISHNHFHG 577 (966)
Q Consensus 534 ~l~~l~~L~~LdLs~N~l~g~----~p~~l~~l~~L~~l~ls~N~l~g 577 (966)
.+...++|+.|||++|.|+.. ++..+...+.|+.||+++|.++.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 555666778888888877652 33445556778888888887753
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=5.3e-13 Score=149.57 Aligned_cols=166 Identities=18% Similarity=0.188 Sum_probs=106.3
Q ss_pred ccCceeeccccccCCcCChhhcC-----CCcccEEcccCCCCCCccCcch-hccCCCcEecCCCCcCCccCCCC------
Q 002105 396 KSLRRVRLQNNRLSGELSSEFTR-----LPLVYFLDISGNDLSGRIGEQK-WEMTSLQMLNLAGNNFSGKLPDS------ 463 (966)
Q Consensus 396 ~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~LdLs~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~------ 463 (966)
++|+.|+|++|.++......+.. .++|+.|||++|.++......+ ..+.+|+.|+|++|.++......
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 34556666666655433322221 2566777777776654322222 23456777777777775432221
Q ss_pred cCccccccccccccccccc----CCCcccCcCCCCEEEccCCccCCC----ChhhccccccccccccCCceeccc----c
Q 002105 464 FGSDQLENLDLSENRFSGT----IPRSFGRLSELMQLKISRNKLFGD----IPEELSSCKKLVSLDLSNNQLSGH----I 531 (966)
Q Consensus 464 ~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 531 (966)
.....|++|+|++|.++.. ++..+..+++|++|+|++|.+... ++..+..+++|+.|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1235688888888887642 334456778899999999988653 356677788999999999999763 3
Q ss_pred CccCCCCCCCcEEeCCCCcCcccCCccccc
Q 002105 532 PASLSEMPVLGQLDLSENQLSGKIPQTLGR 561 (966)
Q Consensus 532 p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~ 561 (966)
+..+...++|+.|||++|.|+..-...+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 344556688999999999998655444443
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=3.9e-10 Score=125.48 Aligned_cols=103 Identities=19% Similarity=0.165 Sum_probs=55.5
Q ss_pred EEeCCCC-CCCCcCCCCcCCCCCcCEEEccC-CCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccC
Q 002105 136 ILDLSNN-MLSGKIPEEIGSFSGLKVLDLGG-NVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGY 213 (966)
Q Consensus 136 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 213 (966)
.++++++ .+++ +|. +..+++|++|+|++ |.+.+..|..|.++++|++|+|++|++++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3456665 5553 555 66666666666664 666655555566666666666666665555555555555555555555
Q ss_pred CCCCCCCCcCccCCCCCCEEEeeccccc
Q 002105 214 NNLSGEIPKEIGDLTSLNHLDLVYNNLT 241 (966)
Q Consensus 214 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 241 (966)
|.|++..+..|..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555533333333332 444444444443
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.06 E-value=9e-09 Score=116.53 Aligned_cols=110 Identities=12% Similarity=0.110 Sum_probs=55.1
Q ss_pred ccChhhhhcCC-CCcEEECCCCCCC--CCCCCCCCCCCcEEeCCCCC---CCCcCCCCcCCCCCcCEEEccCCCCcccCC
Q 002105 100 EIPSDIFSSSN-SLRFLNLSNNNFT--GPVPIGSLSRLEILDLSNNM---LSGKIPEEIGSFSGLKVLDLGGNVLVGEIP 173 (966)
Q Consensus 100 ~ip~~~~~~l~-~L~~L~Ls~N~l~--~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 173 (966)
.|+..+|..++ .|+.+.+..+ ++ |...|.++.+|+.+.++.|. ++..-...|..+.+|+.+.+..+ +.....
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 56777776653 4777777643 33 34445666666666665543 33333345555555555554433 222223
Q ss_pred cCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105 174 LSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG 212 (966)
Q Consensus 174 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 212 (966)
..|.++.+|+.+.+..+ +.......|..+..|+.+.+.
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~ 168 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLP 168 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECC
T ss_pred hhhhhhcccccccccce-eeeecccceeccccccccccc
Confidence 34455555555555432 222223334444445544443
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.03 E-value=1.6e-08 Score=114.38 Aligned_cols=329 Identities=14% Similarity=0.129 Sum_probs=167.0
Q ss_pred cccccCCC-CCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCC---CC--CCCCCCCCCCCcEEeCCCCCCCCcCCCC
Q 002105 78 SSSIFHLP-HVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNN---FT--GPVPIGSLSRLEILDLSNNMLSGKIPEE 151 (966)
Q Consensus 78 ~~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~---l~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 151 (966)
..+|.+.. .|+.+.+..+ ++ .|...+|..+++|+.+.++.|. ++ |...|..+.+|+.+.+..+ ++..-...
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTT
T ss_pred HhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhh
Confidence 44676664 5888888754 55 6888889888999999988764 33 3455677888888877654 55455567
Q ss_pred cCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCC
Q 002105 152 IGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLN 231 (966)
Q Consensus 152 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 231 (966)
|..+.+|+.+.+..+ +.......|.++.+|+.+.+..+ +...-...|. ..+|+.+.+..+-.. ....+|.++.+++
T Consensus 133 F~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~ 208 (394)
T 4gt6_A 133 FHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALS 208 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCC
T ss_pred hhhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccc
Confidence 888899999998754 33344567888899999888754 3322233333 356777766544321 3334566666666
Q ss_pred EEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCC
Q 002105 232 HLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNN 311 (966)
Q Consensus 232 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 311 (966)
......+.... +...+..-.......+ ..+.....+..+.+.. .++..-...|..+..|+.+.+..+.
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~ 276 (394)
T 4gt6_A 209 TITSDSESYPA-IDNVLYEKSANGDYAL----------IRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSV 276 (394)
T ss_dssp EEEECCSSSCB-SSSCEEEECTTSCEEE----------EECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTC
T ss_pred eeccccccccc-ccceeecccccccccc----------cccccccccceEEcCC-cceEcccceeeecccccEEeccccc
Confidence 66555443321 1111100000000000 0001112222222211 1221222344444555555443322
Q ss_pred CCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCc
Q 002105 312 FTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNS 391 (966)
Q Consensus 312 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~ 391 (966)
.+ .....|.++++|+.+.+. +.++......|..+.+|+.++|..+ ++..-..+
T Consensus 277 ~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-------------------------v~~I~~~a 329 (394)
T 4gt6_A 277 VS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-------------------------ITQILDDA 329 (394)
T ss_dssp CE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-------------------------CCEECTTT
T ss_pred ce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-------------------------ccEehHhH
Confidence 21 223344445555555543 2233222334444445555444332 22233345
Q ss_pred cccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcC
Q 002105 392 LSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNF 456 (966)
Q Consensus 392 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 456 (966)
|.+|.+|+.+.+..+ ++.....+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 330 F~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred hhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 666666666666543 444455566666666666666654321 2344456676666665543
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.94 E-value=6.1e-09 Score=110.78 Aligned_cols=135 Identities=14% Similarity=0.054 Sum_probs=99.7
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCHH
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKELS 769 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~ 769 (966)
..++++.+.||++.. .+..+++|............+.+|...+..+-.|..+.++++++...+..|+||||++|.+|.
T Consensus 21 ~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp CCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 345556677999874 467899998764322334567888877776435778889999999889999999999999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHhhc----------------------------------------------------
Q 002105 770 EVLRNLSWERRRKVAIGIAKALRFLHFH---------------------------------------------------- 797 (966)
Q Consensus 770 ~~l~~l~~~~~~~i~~~ia~~l~yLH~~---------------------------------------------------- 797 (966)
+.+. +......++.+++++++.||..
T Consensus 99 ~~~~--~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 176 (263)
T 3tm0_A 99 EEYE--DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKT 176 (263)
T ss_dssp HHCC--TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHH
T ss_pred hccC--CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHh
Confidence 7632 2233457889999999999971
Q ss_pred ----CCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 798 ----CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 798 ----~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
..+.++|+|++|.||+++++ ..+.+.|++.+
T Consensus 177 ~~~~~~~~l~HgDl~~~Nil~~~~--~~~~lIDwe~a 211 (263)
T 3tm0_A 177 EKPEEELVFSHGDLGDSNIFVKDG--KVSGFIDLGRS 211 (263)
T ss_dssp CCCCCCEEEECSSCCTTSEEEETT--EEEEECCCTTC
T ss_pred cCCCCCceEECCCCCcCcEEEECC--cEEEEEEchhc
Confidence 01569999999999999753 23347777644
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.72 E-value=4e-08 Score=104.12 Aligned_cols=126 Identities=14% Similarity=0.150 Sum_probs=89.9
Q ss_pred CCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCc--eeEEeeEEecCCeeEEEEEccCCCCHHH
Q 002105 693 KKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPN--IVRLHGVCRSEKAAYLVYEYIEGKELSE 770 (966)
Q Consensus 693 ~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~n--iv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 770 (966)
+|..+.||++.. .+|..+++|..... ....+..|...+..+ .+.+ +.+++++...++..++||||++|.++.
T Consensus 30 gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l-~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 30 GCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWL-ATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp TTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHH-HTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred CCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHH-HhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 344578999875 66778999986432 235677788777664 4334 566899888888899999999999884
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------------------
Q 002105 771 VLRNLSWERRRKVAIGIAKALRFLHFHC---------------------------------------------------- 798 (966)
Q Consensus 771 ~l~~l~~~~~~~i~~~ia~~l~yLH~~~---------------------------------------------------- 798 (966)
.... ....++.++++.++.||...
T Consensus 104 -~~~~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 179 (264)
T 1nd4_A 104 -SSHL---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMP 179 (264)
T ss_dssp -TSCC---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCC
T ss_pred -cCcC---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcC
Confidence 2222 23467788888888888532
Q ss_pred ---CCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 799 ---SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 799 ---~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
...++|+|++|+||+++++ ..+++.|++.+
T Consensus 180 ~~~~~~l~HgDl~~~Nil~~~~--~~~~liD~~~a 212 (264)
T 1nd4_A 180 DGEDLVVTHGDACLPNIMVENG--RFSGFIDCGRL 212 (264)
T ss_dssp SSCCEEEECSSCCGGGEEEETT--EEEEECCCTTC
T ss_pred CCCCeEEECCCCCCCcEEEECC--cEEEEEcchhc
Confidence 1239999999999999853 23457888764
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.71 E-value=4e-08 Score=109.70 Aligned_cols=142 Identities=13% Similarity=0.206 Sum_probs=101.5
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEe--ccCc-ccccchHHHHHHHHhhcC--CCceeEEeeEEecC---CeeEEE
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKII--DVNT-ITTSSFWPDVSQFGKLIM--HPNIVRLHGVCRSE---KAAYLV 759 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~--~~~~-~~~~~~~~e~~~~~~~~~--H~niv~l~g~~~~~---~~~~lv 759 (966)
+...++|.+..||++.. .+..+++|+.. .... .....+.+|...+.. +. +..+.++++++.+. +..|+|
T Consensus 43 ~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~-L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDA-LAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEECCC-CCSCEEEEEC--SSCEEEEECCCC----------CHHHHHHHHHH-HTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHH-hhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 44557777788999875 34678888764 2221 223456677776665 44 45688999998876 458999
Q ss_pred EEccCCCCHHH-HHHcCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 002105 760 YEYIEGKELSE-VLRNLSWERRRKVAIGIAKALRFLHFHC---------------------------------------- 798 (966)
Q Consensus 760 ~Ey~~~g~L~~-~l~~l~~~~~~~i~~~ia~~l~yLH~~~---------------------------------------- 798 (966)
|||++|..+.+ .+..++..++..++.+++++|+.||...
T Consensus 120 me~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 120 MEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp EECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred EEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 99999988843 4456788889999999999999999631
Q ss_pred ---------------CCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105 799 ---------------SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC 832 (966)
Q Consensus 799 ---------------~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~ 832 (966)
.+.++|+|++|.||+++.+....+.+.||+.+..
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 2579999999999999875543457888887643
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.68 E-value=1.8e-06 Score=97.01 Aligned_cols=130 Identities=13% Similarity=0.065 Sum_probs=62.2
Q ss_pred CCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccC
Q 002105 319 SLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSL 398 (966)
Q Consensus 319 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L 398 (966)
.+....+|+.+.+..+ +.......|..+..|+.+.+..+ ++..-...|..+.+|+.+.+..+ +.......|.+|.+|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444455555555433 22223344555555555555443 33333344444555555554322 332333455555666
Q ss_pred ceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCC
Q 002105 399 RRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLA 452 (966)
Q Consensus 399 ~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls 452 (966)
+.+.+.++.+......+|.++.+|+.++|..+ ++..-...|.++++|+.+.+.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 66666555555555555555555555555433 333333344445555554443
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.64 E-value=3e-06 Score=95.07 Aligned_cols=79 Identities=11% Similarity=0.153 Sum_probs=40.2
Q ss_pred ccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCC--CCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCc
Q 002105 81 IFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFT--GPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGL 158 (966)
Q Consensus 81 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 158 (966)
+..-.+|+.+.+.. .++ .|+..+|..+.+|+.++|..+ ++ |...+.++ +|+.+.+..+ ++..-...|.. .+|
T Consensus 42 ~~~~~~i~~v~ip~-~vt-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GIT-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp GGGGGGCSEEEECT-TEE-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred cccccCCEEEEeCC-Ccc-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 44455677777653 344 577777777777777777543 33 23334443 3555544332 33222223332 245
Q ss_pred CEEEccC
Q 002105 159 KVLDLGG 165 (966)
Q Consensus 159 ~~L~L~~ 165 (966)
+.+.+..
T Consensus 116 ~~i~lp~ 122 (379)
T 4h09_A 116 DDFEFPG 122 (379)
T ss_dssp SEEECCT
T ss_pred ccccCCC
Confidence 5555543
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.62 E-value=1.8e-10 Score=121.15 Aligned_cols=41 Identities=34% Similarity=0.464 Sum_probs=21.6
Q ss_pred CCCCCcEEeCCCCCCCC--cCCCCcCCCCCcCEEEccCCCCcc
Q 002105 130 SLSRLEILDLSNNMLSG--KIPEEIGSFSGLKVLDLGGNVLVG 170 (966)
Q Consensus 130 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~ 170 (966)
++++|++|+|++|+|++ .+|..+..+++|++|+|++|.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~ 210 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 210 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC
Confidence 34555555555555554 233444455555555555555543
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.59 E-value=1.4e-08 Score=112.60 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=29.4
Q ss_pred CCCCCEEEccCCcCcccCchhhc---CCCCCceecccCCCCCCC----CCCCCCCCCCccEEEccCCcCcc
Q 002105 275 LKSLVSFDLSDNYLSGEIPEEVI---QLQNLEILHLFSNNFTGK----IPSSLASMPKLQVLQLWSNQFSG 338 (966)
Q Consensus 275 l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 338 (966)
+++|++|+|++|.+....+..+. .+++|+.|+|+.|.+++. ++..+..+++|+.|+|++|.++.
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 34455555544444432222221 244555555555554431 22222345566666666666543
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.57 E-value=1.5e-08 Score=112.29 Aligned_cols=138 Identities=20% Similarity=0.195 Sum_probs=66.4
Q ss_pred CCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccc--cCCcceEEEccC--CCCCCCC-----
Q 002105 150 EEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIG--QLRNLKWIYLGY--NNLSGEI----- 220 (966)
Q Consensus 150 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~L~~--N~l~~~~----- 220 (966)
..+..+++|+.|+|++|.-. .++. + .+++|+.|++..+.+.......+. .+++|++|+|+. |...+..
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 34455677777777666211 1222 2 266677777766665433222332 466666666642 1111110
Q ss_pred CcCc--cCCCCCCEEEeecccccccCCcCC---CCCCccceEeccccccCCC----CChhhhcCCCCCEEEccCCcCcc
Q 002105 221 PKEI--GDLTSLNHLDLVYNNLTGQIPPSF---GNLSNLRYLFLYQNKLTGS----IPKSILGLKSLVSFDLSDNYLSG 290 (966)
Q Consensus 221 p~~l--~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 290 (966)
...+ ..+++|++|+|.+|.+....+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|++++|.++.
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 0111 234566666666665543221111 2345566666666655432 12223345556666666665543
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.51 E-value=8.3e-08 Score=104.38 Aligned_cols=180 Identities=17% Similarity=0.191 Sum_probs=113.3
Q ss_pred CCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCc--eeEEeeEEecCC---eeEEEEEccCC
Q 002105 691 RGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPN--IVRLHGVCRSEK---AAYLVYEYIEG 765 (966)
Q Consensus 691 ~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~n--iv~l~g~~~~~~---~~~lv~Ey~~~ 765 (966)
.++|....||++. ..+++|+-... .....+.+|.+.+..+..|.. +.+.++++..++ ..|+||||++|
T Consensus 28 ~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 28 SGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp EEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred cCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 4566777788753 45788874322 223456777776665323332 344555443333 45899999999
Q ss_pred CCHHH-HHHcCCHHHHHHHHHHHHHHHHHHhhc-----------------------------------------------
Q 002105 766 KELSE-VLRNLSWERRRKVAIGIAKALRFLHFH----------------------------------------------- 797 (966)
Q Consensus 766 g~L~~-~l~~l~~~~~~~i~~~ia~~l~yLH~~----------------------------------------------- 797 (966)
.++.+ ....++..++..++.++++.++.||..
T Consensus 101 ~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 180 (304)
T 3sg8_A 101 VPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDI 180 (304)
T ss_dssp EECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred eECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHH
Confidence 99875 445688888999999999999999951
Q ss_pred --------CCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCCCC--cCCccc---ccccccC------CC------
Q 002105 798 --------CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDSKS--INSSAY---VAPETKE------SK------ 852 (966)
Q Consensus 798 --------~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y---~aPE~~~------~~------ 852 (966)
..+.++|+|++|.||+++++....+.+.||+.+...+... .....+ ..|+... +.
T Consensus 181 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~ 260 (304)
T 3sg8_A 181 LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTV 260 (304)
T ss_dssp HTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHH
T ss_pred HhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHH
Confidence 1246899999999999986423345678887765432110 000001 1222110 00
Q ss_pred --CCCCcchHHHHHHHHHHHHcCCCCC
Q 002105 853 --DITEKGDIYGFGLILIDLLTGKSPA 877 (966)
Q Consensus 853 --~~~~~~Dv~S~Gv~l~el~tg~~p~ 877 (966)
......+.|++|+++|++.+|..++
T Consensus 261 ~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 261 LEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0112258999999999999998774
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=4.2e-08 Score=103.14 Aligned_cols=101 Identities=27% Similarity=0.386 Sum_probs=70.8
Q ss_pred ccccc--ccccccccc---ccCCCcccCcCCCCEEEccCCccCC--CChhhccccccccccccCCceeccccCccCCCCC
Q 002105 467 DQLEN--LDLSENRFS---GTIPRSFGRLSELMQLKISRNKLFG--DIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMP 539 (966)
Q Consensus 467 ~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 539 (966)
+.|.. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+.
T Consensus 141 p~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~ 218 (267)
T 3rw6_A 141 PDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIK 218 (267)
T ss_dssp HHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGT
T ss_pred cchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcc
Confidence 34444 566777432 2222223567888999999999887 4567778888999999999988865 2333333
Q ss_pred --CCcEEeCCCCcCcccCCc-------ccccCCCCCeee
Q 002105 540 --VLGQLDLSENQLSGKIPQ-------TLGRVASLVQVN 569 (966)
Q Consensus 540 --~L~~LdLs~N~l~g~~p~-------~l~~l~~L~~l~ 569 (966)
+|+.|+|++|.+++.+|. .+..+++|+.||
T Consensus 219 ~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 219 GLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 888999999999887763 366778888776
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.09 E-value=4.1e-07 Score=90.88 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=59.0
Q ss_pred ccCcCCCCEEEccCCccCCC----ChhhccccccccccccCCceeccc----cCccCCCCCCCcEEeC--CCCcCccc--
Q 002105 487 FGRLSELMQLKISRNKLFGD----IPEELSSCKKLVSLDLSNNQLSGH----IPASLSEMPVLGQLDL--SENQLSGK-- 554 (966)
Q Consensus 487 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~LdL--s~N~l~g~-- 554 (966)
+...++|++|+|++|++... +...+...++|++|+|++|.|... +...+...+.|+.|+| ++|.++..
T Consensus 61 L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~ 140 (185)
T 1io0_A 61 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE 140 (185)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred HHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHH
Confidence 34445666777777766432 233445556777777777777653 3455666677888888 77888753
Q ss_pred --CCcccccCCCCCeeeCcCCccc
Q 002105 555 --IPQTLGRVASLVQVNISHNHFH 576 (966)
Q Consensus 555 --~p~~l~~l~~L~~l~ls~N~l~ 576 (966)
+...+...+.|+.|++++|.+.
T Consensus 141 ~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 141 MEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCcCEEeccCCCCC
Confidence 3345556678888888888764
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.99 E-value=6.3e-07 Score=89.48 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=20.9
Q ss_pred hhcCCCCcEEECCCC-CCCCC--C----CCCCCCCCcEEeCCCCCCC
Q 002105 106 FSSSNSLRFLNLSNN-NFTGP--V----PIGSLSRLEILDLSNNMLS 145 (966)
Q Consensus 106 ~~~l~~L~~L~Ls~N-~l~~~--~----~~~~l~~L~~L~Ls~N~l~ 145 (966)
+...+.|++|+|++| .+... . .+...++|++|||++|.+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 344466777777766 66521 0 0133455555555555554
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.89 E-value=2.8e-05 Score=84.87 Aligned_cols=131 Identities=19% Similarity=0.169 Sum_probs=89.8
Q ss_pred ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCC----CceeEEeeEEecCCeeEEEEEc
Q 002105 687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMH----PNIVRLHGVCRSEKAAYLVYEY 762 (966)
Q Consensus 687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H----~niv~l~g~~~~~~~~~lv~Ey 762 (966)
.+...++|....||++ |..+++|..... .....+.+|...+.. +.+ ..+.+++++ +..|+||||
T Consensus 41 ~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~-L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 41 ELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRF-LENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHH-HTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred EEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHH-HHhcCCCCCcceEEec----CCcEEEEee
Confidence 3444567777789987 567888865321 112346677766655 354 223455554 567899999
Q ss_pred cCCCCHH-HHHHcCCHHHHHHHHHHHHHHHHHHhhcCC------------------------------------------
Q 002105 763 IEGKELS-EVLRNLSWERRRKVAIGIAKALRFLHFHCS------------------------------------------ 799 (966)
Q Consensus 763 ~~~g~L~-~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~------------------------------------------ 799 (966)
++|.++. ..+..++..++..++.++++.++.||....
T Consensus 109 i~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
T 3r70_A 109 IKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEH 188 (320)
T ss_dssp CCCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred cCCccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHH
Confidence 9999986 445567888888899999999999985322
Q ss_pred ------------------CCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105 800 ------------------PSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY 831 (966)
Q Consensus 800 ------------------~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~ 831 (966)
+.++|+|++|.||+++++ ..+.+.|++.+.
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~--~~~~~iD~~~~~ 236 (320)
T 3r70_A 189 IETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN--RLFGVIDFGDFN 236 (320)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT--EEEEECCCTTCE
T ss_pred HHHHHHHHHhccccccCCceeeECCCCCCcEEEECC--ceEEEECCcccc
Confidence 345999999999999863 234677777654
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.88 E-value=4.3e-05 Score=81.81 Aligned_cols=75 Identities=16% Similarity=0.223 Sum_probs=55.1
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCC---ceeEEeeEEecCCeeEEEEEccC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHP---NIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~---niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
+..+++|+++.||+++. .+|..++||+...........|..|.+.+.. ++|. .+.+++++. ..++||||++
T Consensus 20 ~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~-L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDW-LGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHH-HTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred eeeeCCcchhheEEEEe-CCCCeEEEEecCCCCcchhHHHHHHHHHHHH-HHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 34457788889999986 7888999998543322233567888888877 5654 578888764 3699999999
Q ss_pred CCCH
Q 002105 765 GKEL 768 (966)
Q Consensus 765 ~g~L 768 (966)
|+.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.87 E-value=6.5e-05 Score=81.34 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=84.4
Q ss_pred CCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCC---ceeEEeeEEe-cCCeeEEEEEccCCC
Q 002105 691 RGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHP---NIVRLHGVCR-SEKAAYLVYEYIEGK 766 (966)
Q Consensus 691 ~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~---niv~l~g~~~-~~~~~~lv~Ey~~~g 766 (966)
.++|....||++ |..+++|.-. .......+..|...+.. +.+. .+.+.+.++. ..+..|+||||++|.
T Consensus 27 l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~-L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 27 LGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPL-LVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHH-HTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred cCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHH-HHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 344555568876 4567888632 11223456677776666 4432 3556666664 456689999999998
Q ss_pred CHHHH-HHcCCHHHHHHHHHHHHHHHHHHhhc------------------------------------------------
Q 002105 767 ELSEV-LRNLSWERRRKVAIGIAKALRFLHFH------------------------------------------------ 797 (966)
Q Consensus 767 ~L~~~-l~~l~~~~~~~i~~~ia~~l~yLH~~------------------------------------------------ 797 (966)
.+.+. +..++..++..++.++++.|+.||..
T Consensus 99 ~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 178 (306)
T 3tdw_A 99 ILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQS 178 (306)
T ss_dssp ECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHH
T ss_pred ECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHH
Confidence 88763 34455556666666666666666632
Q ss_pred ---------CCCCeEeecCCCCcEEEcCC--CCceEEEeccccce
Q 002105 798 ---------CSPSVVAGDVSPGKVIVDGK--DEPHLRLSVPGLAY 831 (966)
Q Consensus 798 ---------~~~~iiHrDlk~~Nill~~~--~~~~~~~~~~~~~~ 831 (966)
..+.++|+|++|.||+++.+ ....+.+.|++.+.
T Consensus 179 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 179 YMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 23467999999999999862 12223577776543
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.82 E-value=0.00011 Score=77.93 Aligned_cols=127 Identities=19% Similarity=0.195 Sum_probs=85.8
Q ss_pred EEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCHHHHHHcCCH
Q 002105 698 SSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKELSEVLRNLSW 777 (966)
Q Consensus 698 ~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~ 777 (966)
.||+.....++..+++|+-... ...++.+|...+..+-.+--+.++++++..++..|+||||++|.++.+..... .
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~-~ 115 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY-P 115 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC-G
T ss_pred eEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC-H
Confidence 5899887666778888875432 22345667666655423434678889999999999999999999887765432 2
Q ss_pred HHHHHHHHHHHHHHHHHhhc-------------------------------------------------------CCCCe
Q 002105 778 ERRRKVAIGIAKALRFLHFH-------------------------------------------------------CSPSV 802 (966)
Q Consensus 778 ~~~~~i~~~ia~~l~yLH~~-------------------------------------------------------~~~~i 802 (966)
..+..++.++++.|+-||.. ..+.+
T Consensus 116 ~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 195 (272)
T 4gkh_A 116 DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVV 195 (272)
T ss_dssp GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEE
Confidence 23445666667777777631 02238
Q ss_pred EeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 803 VAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 803 iHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
+|+|+.+.||+++++ ..+.+.|++.+
T Consensus 196 ~HGDl~~~Nil~~~~--~~~~viDwe~a 221 (272)
T 4gkh_A 196 THGDFSLDNLIFDEG--KLIGCIDVGRV 221 (272)
T ss_dssp ECSCCCTTSEEEETT--EEEEECCCTTC
T ss_pred EcCCCCCCeEEEECC--eEEEEEECccc
Confidence 999999999999853 22346666644
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.48 E-value=0.00025 Score=78.57 Aligned_cols=78 Identities=9% Similarity=0.071 Sum_probs=48.6
Q ss_pred CCCCccEEEEEEEe--c----CCcEEEEEEEeccC---cccccchHHHHHHHHhhcCC--CceeEEeeEEecC---CeeE
Q 002105 692 GKKGVSSSYKVRSL--A----NDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMH--PNIVRLHGVCRSE---KAAY 757 (966)
Q Consensus 692 g~~g~~~vy~~~~~--~----~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H--~niv~l~g~~~~~---~~~~ 757 (966)
++|....+|++... . ++..+++|.-.... ......+..|...+..+-.| -.+.++++++.+. +..|
T Consensus 30 ~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~ 109 (357)
T 3ats_A 30 STGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPF 109 (357)
T ss_dssp TTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCE
T ss_pred CCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCce
Confidence 55666779987752 0 25677887643322 11234567777666554333 3567788887665 4578
Q ss_pred EEEEccCCCCHH
Q 002105 758 LVYEYIEGKELS 769 (966)
Q Consensus 758 lv~Ey~~~g~L~ 769 (966)
+||||++|..+.
T Consensus 110 ~v~e~l~G~~l~ 121 (357)
T 3ats_A 110 FLMDYVEGVVPP 121 (357)
T ss_dssp EEEECCCCBCCC
T ss_pred EEEEecCCCChh
Confidence 999999986643
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.23 E-value=0.00077 Score=74.63 Aligned_cols=71 Identities=11% Similarity=0.178 Sum_probs=47.4
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCc--eeEEeeEEecC-CeeEEEEEccCCC
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPN--IVRLHGVCRSE-KAAYLVYEYIEGK 766 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~n--iv~l~g~~~~~-~~~~lv~Ey~~~g 766 (966)
..+.|....+|++.. +|..+++|.-... ..+..|...+..+ .... +.++++++... +..|+||||++|.
T Consensus 48 ~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L-~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 48 QLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHF-ASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHH-CCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred ECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHH-HhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 345566677998874 5778888865321 2467777666653 3322 45667776654 6789999999986
Q ss_pred CH
Q 002105 767 EL 768 (966)
Q Consensus 767 ~L 768 (966)
.+
T Consensus 120 ~l 121 (362)
T 3ovc_A 120 TL 121 (362)
T ss_dssp ET
T ss_pred Cc
Confidence 55
No 424
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.07 E-value=0.0027 Score=68.44 Aligned_cols=76 Identities=14% Similarity=0.126 Sum_probs=54.4
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcC--CCceeEEeeEEecCCeeEEEEEccCC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIM--HPNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~--H~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
+..+++|....+|++.. ++..+++|.-... ....|..|.+.+..+-. ...+.+.++++..++..|+||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 44567778888999874 5678888876432 23346667666655322 35688888888888899999999998
Q ss_pred CCH
Q 002105 766 KEL 768 (966)
Q Consensus 766 g~L 768 (966)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.07 E-value=0.0012 Score=74.22 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=45.0
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-------ccccchHHHHHHHHhhcCC-C-ceeEEeeEEecCCeeEE
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-------ITTSSFWPDVSQFGKLIMH-P-NIVRLHGVCRSEKAAYL 758 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-------~~~~~~~~e~~~~~~~~~H-~-niv~l~g~~~~~~~~~l 758 (966)
...+|.|..+.||++....++..++||....... .....+..|.+.+..+-.+ | .+.+++.+. ++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 3456888889999997645678899997643211 1223345666665543222 3 344566543 445689
Q ss_pred EEEccCCC
Q 002105 759 VYEYIEGK 766 (966)
Q Consensus 759 v~Ey~~~g 766 (966)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.99 E-value=0.00026 Score=68.87 Aligned_cols=34 Identities=9% Similarity=-0.015 Sum_probs=14.6
Q ss_pred cceEEEccCCCCCCCCCcCccCCCCCCEEEeecc
Q 002105 205 NLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYN 238 (966)
Q Consensus 205 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 238 (966)
+|++||++++.++..--..+..+++|++|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3445555544443322233344444444444444
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.98 E-value=0.0002 Score=69.68 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=15.6
Q ss_pred CCCEEEccCCCCcccCCcccccCCcceEEEccCC
Q 002105 181 SLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYN 214 (966)
Q Consensus 181 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N 214 (966)
.|+.||++++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4455555554443332333444455555555544
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.68 E-value=0.0055 Score=65.31 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=49.0
Q ss_pred cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCC--CceeEEeeEEecCCeeEEEEEccCC
Q 002105 688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMH--PNIVRLHGVCRSEKAAYLVYEYIEG 765 (966)
Q Consensus 688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H--~niv~l~g~~~~~~~~~lv~Ey~~~ 765 (966)
+...|.|..+.||+++. .+|+.|+||+-..........|..|...+..+-+. --+.+.+++. ..++||||+++
T Consensus 20 v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 34457778888999986 88999999975443333333466777766653222 1244555542 24799999987
Q ss_pred CCH
Q 002105 766 KEL 768 (966)
Q Consensus 766 g~L 768 (966)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 753
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.57 E-value=0.004 Score=70.45 Aligned_cols=73 Identities=16% Similarity=0.211 Sum_probs=46.2
Q ss_pred CCCeEeecCCCCcEEEcCCCCceEEEeccccceecCCCC-cC------CcccccccccCCC---CCCCcchHHHHHHHHH
Q 002105 799 SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDSKS-IN------SSAYVAPETKESK---DITEKGDIYGFGLILI 868 (966)
Q Consensus 799 ~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~y~aPE~~~~~---~~~~~~Dv~S~Gv~l~ 868 (966)
.+.++|+|++|.||+++.+. +.+.|++.+...+... .+ ...|++|++.... .-....++++....+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~---~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS---TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC---EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC---CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 67899999999999998653 6788887765432110 00 1246777655321 1122355668888888
Q ss_pred HHHcCC
Q 002105 869 DLLTGK 874 (966)
Q Consensus 869 el~tg~ 874 (966)
+..+++
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887753
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.34 E-value=0.0046 Score=57.11 Aligned_cols=58 Identities=19% Similarity=0.303 Sum_probs=40.5
Q ss_pred ccccCCceec-cccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCccccc
Q 002105 519 SLDLSNNQLS-GHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGS 578 (966)
Q Consensus 519 ~L~Ls~N~l~-~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ 578 (966)
.++.+++.|+ ..+|..+. ++|+.|||++|+|+...+..|..+++|+.|+|++|++.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 5566666665 34554332 3577888888888877777778888888888888887654
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.33 E-value=0.0066 Score=56.07 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=33.1
Q ss_pred EEECCCCCCC-CCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCC
Q 002105 114 FLNLSNNNFT-GPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVL 168 (966)
Q Consensus 114 ~L~Ls~N~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 168 (966)
.++.+++.++ ..+|.+-..+|++|||++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4455555554 233333334577777777777765556667777777777777754
No 432
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.02 E-value=0.028 Score=61.27 Aligned_cols=42 Identities=12% Similarity=0.085 Sum_probs=29.3
Q ss_pred HHHHHHHHhh----------cCCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 787 IAKALRFLHF----------HCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 787 ia~~l~yLH~----------~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
+.+++++|+. ...+.++|+|+++.||+++.+ ..+.+.||+.+
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~--~~~~lIDfe~a 250 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGEN--EQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGG--GCEEECCCTTC
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCC--CcEEEEehhhc
Confidence 3456677763 135789999999999999743 23567777654
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.93 E-value=0.0017 Score=64.26 Aligned_cols=86 Identities=14% Similarity=0.198 Sum_probs=49.0
Q ss_pred CcCCCCEEEccCCccCC----CChhhccccccccccccCCceeccc----cCccCCCCCCCcEEeCCCC---cCcc----
Q 002105 489 RLSELMQLKISRNKLFG----DIPEELSSCKKLVSLDLSNNQLSGH----IPASLSEMPVLGQLDLSEN---QLSG---- 553 (966)
Q Consensus 489 ~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~LdLs~N---~l~g---- 553 (966)
.-+.|+.|+|++|++.. .+...+..-+.|+.|+|++|.|... +-+.+..-+.|+.|+|++| .+..
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~ 147 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEM 147 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHH
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHH
Confidence 34455666666666542 2333444556677777777777642 1233444556888888765 3332
Q ss_pred cCCcccccCCCCCeeeCcCCc
Q 002105 554 KIPQTLGRVASLVQVNISHNH 574 (966)
Q Consensus 554 ~~p~~l~~l~~L~~l~ls~N~ 574 (966)
.+-..+..-+.|..|+++.|.
T Consensus 148 ~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 148 DMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhCCCcCeEeccCCC
Confidence 133445556778888876554
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.87 E-value=0.048 Score=59.28 Aligned_cols=33 Identities=9% Similarity=-0.115 Sum_probs=24.4
Q ss_pred CCCeEeecCCCCcEEEcCCC--CceEEEeccccce
Q 002105 799 SPSVVAGDVSPGKVIVDGKD--EPHLRLSVPGLAY 831 (966)
Q Consensus 799 ~~~iiHrDlk~~Nill~~~~--~~~~~~~~~~~~~ 831 (966)
.+.++|+|+.+.||+++.+. ...+.+.||+.+.
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 56899999999999998632 1345677777654
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.03 E-value=0.0042 Score=61.47 Aligned_cols=86 Identities=17% Similarity=0.106 Sum_probs=37.7
Q ss_pred CCcceEEEccCCCCCCC----CCcCccCCCCCCEEEeeccccccc----CCcCCCCCCccceEeccccc---cCC----C
Q 002105 203 LRNLKWIYLGYNNLSGE----IPKEIGDLTSLNHLDLVYNNLTGQ----IPPSFGNLSNLRYLFLYQNK---LTG----S 267 (966)
Q Consensus 203 l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~---l~~----~ 267 (966)
-+.|+.|+|++|.+... +.+.+..-+.|++|+|+.|.|... +-..+..-+.|++|+|++|. +.. .
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 34455555555544321 112222334555555555555421 11223333446666665432 111 1
Q ss_pred CChhhhcCCCCCEEEccCCcC
Q 002105 268 IPKSILGLKSLVSFDLSDNYL 288 (966)
Q Consensus 268 ~p~~l~~l~~L~~L~Ls~N~l 288 (966)
+...+..-++|+.|+++.|.+
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhCCCcCeEeccCCCc
Confidence 222344445666666665543
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=94.02 E-value=0.11 Score=55.85 Aligned_cols=136 Identities=12% Similarity=0.102 Sum_probs=70.1
Q ss_pred ccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCC-ceeEEeeE------EecCCeeEEEEE
Q 002105 689 TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHP-NIVRLHGV------CRSEKAAYLVYE 761 (966)
Q Consensus 689 ~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~-niv~l~g~------~~~~~~~~lv~E 761 (966)
..+++|....+|++.. .+| .+++|..... .....+..|...+..+-.|. .+.+++.. ...++..++|||
T Consensus 28 ~~i~~G~~n~~~~v~~-~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHT-TKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEE-SSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEe-CCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 3445566677999875 445 6788876542 12233444554443321221 12333321 122456799999
Q ss_pred ccCCCCHH-----H------H---HHc----C-----------CHHHHHH------------HHHHHHHHHHHHhhc---
Q 002105 762 YIEGKELS-----E------V---LRN----L-----------SWERRRK------------VAIGIAKALRFLHFH--- 797 (966)
Q Consensus 762 y~~~g~L~-----~------~---l~~----l-----------~~~~~~~------------i~~~ia~~l~yLH~~--- 797 (966)
|++|..+. . . +|. + .|..... +...+.+.+++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 99986531 1 1 121 1 1433211 111245566666532
Q ss_pred -CCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 798 -CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 798 -~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
....++|+|+.+.||+++++ ..+.+.||+.+
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~--~~~~lIDf~~a 215 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGD--ELSGLIDFYFA 215 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETT--EEEEECCCTTC
T ss_pred cCCcccCCCCCCccCEEEeCC--ceEEEecchhc
Confidence 24579999999999999854 22356777644
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.75 E-value=0.082 Score=57.14 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=40.3
Q ss_pred CCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCC-CceeEEeeE-----EecCCeeEEEEEccCCCC
Q 002105 694 KGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMH-PNIVRLHGV-----CRSEKAAYLVYEYIEGKE 767 (966)
Q Consensus 694 ~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H-~niv~l~g~-----~~~~~~~~lv~Ey~~~g~ 767 (966)
|+...||++.. .+|..+++|...... .....+..|...+..+-.+ -.+++.+.. ...++..++||||++|..
T Consensus 36 g~~n~~y~v~~-~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~ 113 (328)
T 1zyl_A 36 SYENRVYQFQD-EDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 113 (328)
T ss_dssp CSSSEEEEECC-TTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred CcccceEEEEc-CCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCCC
Confidence 56667998765 567678999875321 1223344454444332112 124444443 223456789999999854
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=93.46 E-value=0.1 Score=58.81 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=41.4
Q ss_pred CCCCCccEEEEEEEec-------CCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105 691 RGKKGVSSSYKVRSLA-------NDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI 763 (966)
Q Consensus 691 ~g~~g~~~vy~~~~~~-------~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~ 763 (966)
+++|....+|++.... .+..+++|.-... .....+..|...+..+-.+.-..++++++.. .+||||+
T Consensus 81 l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l 154 (429)
T 1nw1_A 81 IKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI 154 (429)
T ss_dssp ECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred eCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEe
Confidence 4555667799987621 2467777765221 1113456676665553334333667776543 3899999
Q ss_pred CCCC
Q 002105 764 EGKE 767 (966)
Q Consensus 764 ~~g~ 767 (966)
+|.+
T Consensus 155 ~G~~ 158 (429)
T 1nw1_A 155 PSRP 158 (429)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 8643
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.00 E-value=0.78 Score=45.61 Aligned_cols=99 Identities=19% Similarity=0.135 Sum_probs=59.2
Q ss_pred CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCCCCcCCc
Q 002105 766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDSKSINSS 841 (966)
Q Consensus 766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (966)
-+|.+.|+ .++..+.+.++.|.+++|.-.-....+ ..+=+-|..|++..++. |.+.... . .....
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~--V~f~~~~-s------~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGA--VTLAPAA-D------DAGEP 101 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSC--EEECCC--------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCc--eeccccc-c------ccccc
Confidence 47889886 589999999999999998766111011 12233467888876554 3333211 0 01123
Q ss_pred ccccccccCCCCCCCcchHHHHHHHHHHHHcCCCC
Q 002105 842 AYVAPETKESKDITEKGDIYGFGLILIDLLTGKSP 876 (966)
Q Consensus 842 ~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p 876 (966)
.+.|||... ...+.+.=|||+|+++|..+-=..|
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 467888764 3456788999999999998874444
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=92.65 E-value=0.1 Score=57.52 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=37.2
Q ss_pred CCccEEEEEEEec-------CCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105 694 KGVSSSYKVRSLA-------NDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK 766 (966)
Q Consensus 694 ~g~~~vy~~~~~~-------~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g 766 (966)
|-...+|++.... ++..+++|+- ...........+|...+..+-.+.-..++++++.. .+||||++|.
T Consensus 61 G~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~ 135 (379)
T 3feg_A 61 GLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSR 135 (379)
T ss_dssp ---CCEEEEECCTTSCCCSSCCSEEEEEEC-C---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEE
T ss_pred cccccEEEEEeCCCccccCCCCCeEEEEEC-CCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCc
Confidence 3444588877521 2467777763 21111223345666655544334334666776654 2999999986
Q ss_pred CH
Q 002105 767 EL 768 (966)
Q Consensus 767 ~L 768 (966)
.+
T Consensus 136 ~l 137 (379)
T 3feg_A 136 PL 137 (379)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 441
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=92.30 E-value=0.56 Score=49.82 Aligned_cols=70 Identities=7% Similarity=-0.055 Sum_probs=35.6
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc-CCCCH
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI-EGKEL 768 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~-~~g~L 768 (966)
..++|....+|++ ..+++|.-..... ...+...|...+..+-.+.-..++++++ ++.-++|+||+ +|.++
T Consensus 25 ~l~gG~tN~~~~~------~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 25 ERLGGLTNLVFRA------GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred EcCCcccccccee------eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 3455666779987 4577776543211 1122345555444321221113555543 33347899999 65444
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=91.88 E-value=0.57 Score=53.06 Aligned_cols=74 Identities=8% Similarity=-0.015 Sum_probs=39.3
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCH
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKEL 768 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L 768 (966)
.+++|-...+|++.....+..+++|.-.... ...-+...|...+..+-.+.-..++++++. + .+||||++|..+
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 3455566779998862224677777542211 111112366666655323333357777763 2 259999997443
No 443
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.73 E-value=0.51 Score=33.48 Aligned_cols=10 Identities=10% Similarity=0.507 Sum_probs=4.9
Q ss_pred hhhHHHHHHH
Q 002105 621 LVVACFLAVL 630 (966)
Q Consensus 621 ~iv~i~~~~~ 630 (966)
.+++++++++
T Consensus 13 ~Ia~~vVGvl 22 (44)
T 2jwa_A 13 SIISAVVGIL 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 3555555544
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=89.26 E-value=0.59 Score=51.30 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=21.4
Q ss_pred CCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105 799 SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA 830 (966)
Q Consensus 799 ~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~ 830 (966)
...++|+|+++.|||++++. +.+.|+..+
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~---~~lID~e~a 239 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC---LRLIDFEYS 239 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C---EEECCCTTC
T ss_pred CeEEEeCCCCcccEEecCCc---EEEEEecCC
Confidence 45799999999999997532 566676544
No 445
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.46 E-value=0.53 Score=33.43 Aligned_cols=26 Identities=15% Similarity=0.301 Sum_probs=11.2
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHHhhh
Q 002105 622 VVACFL-AVLIMLALAAFAITVIRGKK 647 (966)
Q Consensus 622 iv~i~~-~~~ivl~l~~~~~~~~~~~~ 647 (966)
|++.++ +++++++++...++++|+|+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 444433 44444444444444444433
No 446
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=88.09 E-value=2.1 Score=46.27 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=39.0
Q ss_pred CCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCC--CceeEEeeE------EecCCeeEEEEEcc
Q 002105 692 GKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMH--PNIVRLHGV------CRSEKAAYLVYEYI 763 (966)
Q Consensus 692 g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H--~niv~l~g~------~~~~~~~~lv~Ey~ 763 (966)
|.|....||++.. .+| .+++|+...... ..|...+..+-.+ |.+++.+.. ...++..++||||+
T Consensus 32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i 103 (339)
T 3i1a_A 32 GADTNAFAYQADS-ESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFI 103 (339)
T ss_dssp TSCSSCEEEEEEC-SSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECC
T ss_pred cCccccceEEEEe-CCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEecc
Confidence 3333567999875 556 888887644321 2333333222111 224444432 23457789999999
Q ss_pred CCCCH
Q 002105 764 EGKEL 768 (966)
Q Consensus 764 ~~g~L 768 (966)
+|..+
T Consensus 104 ~G~~~ 108 (339)
T 3i1a_A 104 HAPNG 108 (339)
T ss_dssp CCCBT
T ss_pred CCCcC
Confidence 98765
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=86.54 E-value=0.71 Score=32.88 Aligned_cols=24 Identities=21% Similarity=0.188 Sum_probs=10.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Q 002105 623 VACFLAVLIMLALAAFAITVIRGK 646 (966)
Q Consensus 623 v~i~~~~~ivl~l~~~~~~~~~~~ 646 (966)
++++++++++++++..+++++|+|
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eehhHHHHHHHHHHHHHHHHhhhh
Confidence 333444444444443334444443
No 448
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=83.49 E-value=1.7 Score=48.12 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=21.6
Q ss_pred CCCeEeecCCCCcEEEcCCC----CceEEEecccc
Q 002105 799 SPSVVAGDVSPGKVIVDGKD----EPHLRLSVPGL 829 (966)
Q Consensus 799 ~~~iiHrDlk~~Nill~~~~----~~~~~~~~~~~ 829 (966)
...++|+|+.+.||+++.+. ...+.+.|+..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~ 277 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEY 277 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTT
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeecc
Confidence 45789999999999997641 12345555553
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.43 E-value=2.7 Score=28.89 Aligned_cols=22 Identities=27% Similarity=0.165 Sum_probs=12.6
Q ss_pred CCcchhhhHHHHHHHHHHHHHH
Q 002105 616 NQTWWLVVACFLAVLIMLALAA 637 (966)
Q Consensus 616 ~~~~~~iv~i~~~~~ivl~l~~ 637 (966)
..+...++++++++++.+++++
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~ 28 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLL 28 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHHHHHH
Confidence 3445567777776655544443
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=70.19 E-value=7.9 Score=38.33 Aligned_cols=115 Identities=10% Similarity=0.193 Sum_probs=80.5
Q ss_pred CCCceeEEeeEEecCCeeEEEEEccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC
Q 002105 739 MHPNIVRLHGVCRSEKAAYLVYEYIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD 818 (966)
Q Consensus 739 ~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~ 818 (966)
.||+.+.. .+-.+++.+.+.|+.-+++-=...++.++-..|++++..|+....+++. -+|--+.|+||.+|.+.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~ 116 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDG 116 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTS
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCC
Confidence 69999876 5666677777777765544334448889999999999999998877772 37888999999999887
Q ss_pred CceEEEeccccceecCCCCcCCcccccccccCCCCCCCcchHH-HHHHHHHHHHcCCCCCC
Q 002105 819 EPHLRLSVPGLAYCTDSKSINSSAYVAPETKESKDITEKGDIY-GFGLILIDLLTGKSPAD 878 (966)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~-S~Gv~l~el~tg~~p~~ 878 (966)
.+++. --|+. .=|+|. ..+ +-|.| .+=+++..+++++..|+
T Consensus 117 ~p~i~--~RGik-----------~~l~P~-----~~~-ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 117 LPIAK--TRGLQ-----------NVVDPL-----PVS-EAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CEEES--CCEET-----------TTBSCC-----CCC-HHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CEEEE--EccCc-----------cCCCCC-----CCC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 76443 22221 113332 112 33544 68889999999998874
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=66.75 E-value=12 Score=37.25 Aligned_cols=114 Identities=16% Similarity=0.195 Sum_probs=79.5
Q ss_pred CCCceeEEeeEEecCCeeEEEEEccCCCCHHHHHHcCCHHHHHHHHHHHHHHHH-HHhhcCCCCeEeecCCCCcEEEcCC
Q 002105 739 MHPNIVRLHGVCRSEKAAYLVYEYIEGKELSEVLRNLSWERRRKVAIGIAKALR-FLHFHCSPSVVAGDVSPGKVIVDGK 817 (966)
Q Consensus 739 ~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~-yLH~~~~~~iiHrDlk~~Nill~~~ 817 (966)
.||+. =...-.+++.+.+.|+--+++-=...++.++...|++++..++.... +++ .-+|--+.|+||.+|.+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~ 120 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRA 120 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTT
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCC
Confidence 68988 33344667888888887656555567789999999999999888777 666 34777889999999988
Q ss_pred CCceEEEeccccceecCCCCcCCcccccccccCCCCCCCcchHH-HHHHHHHHHHcCCCCCC
Q 002105 818 DEPHLRLSVPGLAYCTDSKSINSSAYVAPETKESKDITEKGDIY-GFGLILIDLLTGKSPAD 878 (966)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~-S~Gv~l~el~tg~~p~~ 878 (966)
..+++. -.|+ .+-|+|.-. ...|.| .+=+++..++.++..|+
T Consensus 121 ~~p~i~--hRGi-----------~~~lpP~e~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 121 LEPFFL--HVGV-----------KESLPPDEW------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CCEEES--CCEE-----------TTTBSSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CcEEEE--EcCC-----------cccCCCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 776543 2222 223445321 233544 68888888888887653
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=56.69 E-value=1.3 Score=50.27 Aligned_cols=55 Identities=7% Similarity=0.005 Sum_probs=14.3
Q ss_pred ccEEEEEEEecCCcEEEE------EEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEe
Q 002105 696 VSSSYKVRSLANDMQFVV------KKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCR 751 (966)
Q Consensus 696 ~~~vy~~~~~~~~~~vav------k~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~ 751 (966)
||.||++.......+||| |+..... ....++|.+|.....+ .+|||+++.+++..
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~-~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKEN-EQIPKYEKIHNFKV 214 (463)
T ss_dssp BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccc-ccccccCCCcceEE
Confidence 888999998555567888 6654321 1223456666555444 68999999998764
No 453
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=44.16 E-value=40 Score=37.33 Aligned_cols=72 Identities=10% Similarity=-0.033 Sum_probs=38.2
Q ss_pred CCCCccEEEEEEEecC-------CcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105 692 GKKGVSSSYKVRSLAN-------DMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE 764 (966)
Q Consensus 692 g~~g~~~vy~~~~~~~-------~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~ 764 (966)
.+|-...+|++..... +..+++|.-... ....-+..+|...+..+-.+.-..++++.+. -+.||||++
T Consensus 79 sGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~efI~ 153 (424)
T 3mes_A 79 FSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-VGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEFID 153 (424)
T ss_dssp CCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-C-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEECCC
T ss_pred CCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-cchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEEeC
Confidence 3455566888876211 467777763221 1111122455555544323333455555432 278999999
Q ss_pred CCCH
Q 002105 765 GKEL 768 (966)
Q Consensus 765 ~g~L 768 (966)
|..|
T Consensus 154 G~~l 157 (424)
T 3mes_A 154 GEPL 157 (424)
T ss_dssp SEEC
T ss_pred CccC
Confidence 8654
No 454
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=43.22 E-value=53 Score=24.42 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=12.6
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHH
Q 002105 617 QTWWLVVACFLAVLIMLALAAFAIT 641 (966)
Q Consensus 617 ~~~~~iv~i~~~~~ivl~l~~~~~~ 641 (966)
...++++..+++.+++++++.++.+
T Consensus 10 vp~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455655555555555544444433
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=37.53 E-value=12 Score=25.05 Aligned_cols=7 Identities=14% Similarity=0.501 Sum_probs=2.8
Q ss_pred hhHHHHH
Q 002105 622 VVACFLA 628 (966)
Q Consensus 622 iv~i~~~ 628 (966)
+++.+++
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3333444
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.96 E-value=60 Score=24.11 Aligned_cols=24 Identities=25% Similarity=0.509 Sum_probs=12.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHH
Q 002105 618 TWWLVVACFLAVLIMLALAAFAIT 641 (966)
Q Consensus 618 ~~~~iv~i~~~~~ivl~l~~~~~~ 641 (966)
..++++..+++.++++++++++.+
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555544444433
No 457
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=32.09 E-value=58 Score=23.12 Aligned_cols=29 Identities=10% Similarity=-0.027 Sum_probs=15.5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 002105 619 WWLVVACFLAVLIMLALAAFAITVIRGKK 647 (966)
Q Consensus 619 ~~~iv~i~~~~~ivl~l~~~~~~~~~~~~ 647 (966)
...+++.++++++++++..+.+..++.++
T Consensus 14 A~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 14 ATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 34555544444445556666666665554
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=30.46 E-value=64 Score=21.31 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=13.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHH
Q 002105 620 WLVVACFLAVLIMLALAAFAITVI 643 (966)
Q Consensus 620 ~~iv~i~~~~~ivl~l~~~~~~~~ 643 (966)
..+++++++.++..++++..++++
T Consensus 7 gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 7 GVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeEeHHHHHHHHHHHHHHhhe
Confidence 456666666665555555544443
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.07 E-value=82 Score=33.26 Aligned_cols=134 Identities=13% Similarity=0.140 Sum_probs=63.6
Q ss_pred cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeE--------------------
Q 002105 690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGV-------------------- 749 (966)
Q Consensus 690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~-------------------- 749 (966)
.+-.+|.+.||.+.. ++..++||-. .....+-|-.++..... +.=|+.--+.-.
T Consensus 75 ~~s~~Gstgvff~~t--d~~~~VVK~s---~~l~~E~l~s~LA~~LG-lpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 75 ERSEKGTEGLFFVET--ESGVFIVKRS---TNIESETFCSLLCMRLG-LHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EECCSTTSCEEEEEE--SSCEEEEECC---TTHHHHHHHHHHHHHHT-CCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EeccCCCCCeEEEEe--CCCEEEEeCc---HHHHHHHHHHHHHHHhC-CCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 334556666887775 5778888833 22222223333333333 344442211100
Q ss_pred --EecCCeeEEEEEccCCCCHHHHHHcCCHHHHH--HHHHH--HHHHHHHHh-hcCCCCeEe-ecCCCCcEEEcCCCCce
Q 002105 750 --CRSEKAAYLVYEYIEGKELSEVLRNLSWERRR--KVAIG--IAKALRFLH-FHCSPSVVA-GDVSPGKVIVDGKDEPH 821 (966)
Q Consensus 750 --~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~--~i~~~--ia~~l~yLH-~~~~~~iiH-rDlk~~Nill~~~~~~~ 821 (966)
...++..+++|||++|-.|.+.=+ ..|.... +.+.+ -.-++.+.. ...+-+.+. .--.++|||++.+. .+
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~-~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n-~~ 226 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTT-TSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG-AT 226 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCS-SSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT-TC
T ss_pred HHHhhcccceehhhhcCCCccccchh-hhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCC-Ce
Confidence 011235679999999766543211 1122211 22222 233444444 333333322 12478899998754 34
Q ss_pred EEEeccccce
Q 002105 822 LRLSVPGLAY 831 (966)
Q Consensus 822 ~~~~~~~~~~ 831 (966)
+-..|.+.+.
T Consensus 227 ~~~IDhn~af 236 (342)
T 1cja_A 227 VVPIDSKIIP 236 (342)
T ss_dssp EEECSCCCCC
T ss_pred EEEEcCCccc
Confidence 5556666553
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=22.17 E-value=1.1e+02 Score=21.42 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=12.3
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHH
Q 002105 617 QTWWLVVACFLAVLIMLALAAFAIT 641 (966)
Q Consensus 617 ~~~~~iv~i~~~~~ivl~l~~~~~~ 641 (966)
...++++..+++.+++++++.++.+
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555444444433
No 461
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.95 E-value=1.2e+02 Score=24.49 Aligned_cols=18 Identities=22% Similarity=0.541 Sum_probs=7.5
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 002105 620 WLVVACFLAVLIMLALAA 637 (966)
Q Consensus 620 ~~iv~i~~~~~ivl~l~~ 637 (966)
+.|++.++++++++.+++
T Consensus 11 ~~Iv~gvi~gilliGlll 28 (79)
T 2knc_B 11 LVVLLSVMGAILLIGLAA 28 (79)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 344444444444444443
Done!