Query         002105
Match_columns 966
No_of_seqs    1009 out of 6286
Neff          9.0 
Searched_HMMs 13730
Date          Mon Mar 25 12:34:41 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002105.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002105hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 2.8E-46   2E-50  398.5  18.0  242  686-952     8-260 (263)
  2 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0   9E-46 6.5E-50  401.6  17.4  243  689-954    32-294 (299)
  3 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0   2E-45 1.4E-49  393.7  19.3  241  687-952    17-269 (272)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0 1.6E-44 1.2E-48  389.2  24.1  240  685-945    22-269 (293)
  5 d1opja_ d.144.1.7 (A:) Abelson 100.0   4E-45 2.9E-49  394.0  18.0  244  687-953    21-276 (287)
  6 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 5.9E-45 4.3E-49  388.4  17.3  239  686-945     8-259 (271)
  7 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 7.3E-45 5.3E-49  389.4  17.9  243  688-952    13-272 (276)
  8 d2j4za1 d.144.1.7 (A:126-388)  100.0 1.6E-44 1.2E-48  383.5  20.1  236  686-945     9-254 (263)
  9 d2jfla1 d.144.1.7 (A:21-308) S 100.0 2.7E-44   2E-48  387.1  22.0  239  686-945    15-268 (288)
 10 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 1.8E-44 1.3E-48  388.9  19.8  244  690-955    14-275 (283)
 11 d2java1 d.144.1.7 (A:3-271) Se 100.0 1.1E-44 8.2E-49  386.4  16.4  242  684-945     5-265 (269)
 12 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 2.4E-44 1.8E-48  386.9  19.1  239  690-952    16-271 (285)
 13 d1t4ha_ d.144.1.7 (A:) Protein 100.0   5E-44 3.6E-48  381.3  20.5  237  690-945    16-265 (270)
 14 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0   5E-44 3.6E-48  383.4  19.1  238  690-951    14-268 (277)
 15 d1fmka3 d.144.1.7 (A:249-533)  100.0 4.1E-44   3E-48  384.7  18.1  246  686-956    20-277 (285)
 16 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 5.9E-44 4.3E-48  392.6  19.6  243  686-949    40-323 (325)
 17 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.8E-43 1.3E-47  374.5  20.5  239  686-949     7-257 (258)
 18 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 1.6E-43 1.2E-47  384.7  19.3  242  686-945    12-263 (307)
 19 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 7.8E-44 5.7E-48  391.1  16.7  191  685-880     8-206 (322)
 20 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 2.2E-43 1.6E-47  383.6  17.5  239  685-945    17-266 (309)
 21 d1koaa2 d.144.1.7 (A:5915-6264 100.0 3.6E-43 2.6E-47  388.6  19.2  243  685-945    28-279 (350)
 22 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 3.7E-43 2.7E-47  377.9  17.1  237  685-945    10-260 (288)
 23 d1byga_ d.144.1.7 (A:) Carboxy 100.0 4.2E-43   3E-47  372.3  16.7  237  688-952    12-258 (262)
 24 d1jksa_ d.144.1.7 (A:) Death-a 100.0 1.8E-42 1.3E-46  375.2  21.8  242  686-945    13-270 (293)
 25 d1koba_ d.144.1.7 (A:) Twitchi 100.0 6.5E-43 4.7E-47  386.8  17.9  243  685-945    31-282 (352)
 26 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 1.7E-42 1.2E-46  378.3  19.6  243  689-953    16-286 (309)
 27 d1lufa_ d.144.1.7 (A:) Musk ty 100.0   9E-43 6.6E-47  379.2  16.8  241  686-949    16-298 (301)
 28 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 1.9E-42 1.4E-46  377.2  18.0  241  690-952    34-293 (311)
 29 d1vjya_ d.144.1.7 (A:) Type I  100.0 2.6E-42 1.9E-46  375.2  18.9  249  690-952    10-297 (303)
 30 d1ywna1 d.144.1.7 (A:818-1166) 100.0   3E-42 2.2E-46  375.2  18.0  246  686-952    16-296 (299)
 31 d2ozaa1 d.144.1.7 (A:51-385) M 100.0   6E-42 4.4E-46  377.0  19.1  237  691-945    20-271 (335)
 32 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 5.6E-42 4.1E-46  372.3  18.1  244  687-952    17-296 (299)
 33 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 5.9E-42 4.3E-46  374.3  18.2  245  688-953    28-308 (311)
 34 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 5.9E-42 4.3E-46  368.4  17.8  244  686-949    10-273 (277)
 35 d1xkka_ d.144.1.7 (A:) EGF rec 100.0   5E-42 3.6E-46  376.0  17.4  246  683-952     9-272 (317)
 36 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 2.5E-41 1.8E-45  368.8  22.3  237  685-945     6-256 (316)
 37 d1u46a_ d.144.1.7 (A:) Activat 100.0 7.7E-42 5.6E-46  365.4  17.4  242  685-949    10-271 (273)
 38 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 5.5E-41   4E-45  368.6  22.5  237  685-945     7-260 (337)
 39 d1xjda_ d.144.1.7 (A:) Protein 100.0 2.1E-41 1.5E-45  370.2  18.7  236  686-944     5-253 (320)
 40 d1tkia_ d.144.1.7 (A:) Titin,  100.0 2.4E-41 1.8E-45  370.1  19.2  241  686-945     8-257 (321)
 41 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 3.2E-41 2.3E-45  370.2  19.0  289   18-311     3-302 (313)
 42 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 1.9E-41 1.4E-45  363.5  16.6  242  687-952    11-268 (273)
 43 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 2.2E-41 1.6E-45  369.0  15.4  243  687-952    24-294 (308)
 44 d1phka_ d.144.1.7 (A:) gamma-s 100.0   3E-40 2.2E-44  353.3  21.7  241  686-945     6-269 (277)
 45 d1omwa3 d.144.1.7 (A:186-549)  100.0   2E-40 1.5E-44  368.8  20.7  239  686-944     7-263 (364)
 46 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 3.5E-40 2.5E-44  364.8  21.2  237  685-945    43-293 (350)
 47 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 2.2E-40 1.6E-44  360.4  16.2  251  687-945     2-279 (299)
 48 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0   6E-40 4.4E-44  351.3  17.6  229  689-945    10-254 (273)
 49 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 4.2E-39 3.1E-43  349.7  18.6  255  685-946     4-283 (298)
 50 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 4.5E-38 3.3E-42  343.4  22.3  251  685-945     9-292 (305)
 51 d1csna_ d.144.1.7 (A:) Casein  100.0 2.9E-37 2.1E-41  333.9  25.3  251  687-954     9-280 (293)
 52 d1ckia_ d.144.1.7 (A:) Casein  100.0 1.8E-37 1.3E-41  337.4  23.0  248  686-952    10-278 (299)
 53 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0   7E-38 5.1E-42  338.3  18.1  248  686-945     5-280 (286)
 54 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 2.9E-37 2.1E-41  342.9  20.7  248  685-945    22-302 (350)
 55 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0   1E-36 7.5E-41  336.0  20.6  190  685-881    37-234 (328)
 56 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 1.4E-36   1E-40  333.5  21.5  253  685-945    12-304 (318)
 57 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 1.2E-36 8.6E-41  338.0  20.3  251  685-946    20-301 (346)
 58 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.5E-36 1.1E-40  336.5  21.0  255  685-946    10-295 (345)
 59 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 1.7E-36 1.2E-40  337.5  18.9  254  685-945    19-310 (355)
 60 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 3.3E-36 2.4E-40  326.5  19.7  253  686-945     5-282 (292)
 61 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 5.6E-36 4.1E-40  327.5  19.6  242  685-945    26-291 (322)
 62 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 9.4E-36 6.9E-40  331.3  12.3  253  685-945    20-300 (348)
 63 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 1.7E-31 1.2E-35  298.6  16.0  258  685-945    15-327 (362)
 64 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.7E-30   2E-34  282.6  15.9  250  350-601    52-307 (313)
 65 d2omza2 c.10.2.1 (A:33-416) In 100.0 4.8E-27 3.5E-31  264.1  31.7  324   83-434    42-365 (384)
 66 d2omza2 c.10.2.1 (A:33-416) In 100.0 3.8E-27 2.8E-31  264.9  29.7  342  131-526    43-384 (384)
 67 d1xkua_ c.10.2.7 (A:) Decorin   99.9 2.8E-24   2E-28  233.4  28.2  243   50-314    10-256 (305)
 68 d1xkua_ c.10.2.7 (A:) Decorin   99.9 1.1E-23 7.9E-28  228.7  28.9  223  133-362    32-256 (305)
 69 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 3.5E-24 2.5E-28  230.0  17.3  223  209-458    16-239 (284)
 70 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 1.8E-23 1.3E-27  224.5  20.0  224  183-409    14-238 (284)
 71 d1p9ag_ c.10.2.7 (G:) von Will  99.9 3.8E-22 2.7E-26  211.7  22.3  203   57-265     6-208 (266)
 72 d1p9ag_ c.10.2.7 (G:) von Will  99.9   8E-22 5.8E-26  209.1  19.4  180  396-578    31-210 (266)
 73 d1jl5a_ c.10.2.6 (A:) Leucine   99.8 3.5E-17 2.6E-21  180.1  31.4  313   62-451    39-351 (353)
 74 d1jl5a_ c.10.2.6 (A:) Leucine   99.8 4.6E-17 3.4E-21  179.1  32.1   96  110-217    38-133 (353)
 75 d1zara2 d.144.1.9 (A:91-281) R  99.7 2.9E-19 2.1E-23  178.8   3.6  159  690-867     7-189 (191)
 76 d1h6ua2 c.10.2.1 (A:36-262) In  99.7 2.6E-17 1.9E-21  169.5  16.0  187   83-308    39-225 (227)
 77 d1h6ua2 c.10.2.1 (A:36-262) In  99.7 2.4E-17 1.8E-21  169.7  15.1  203  114-332    23-225 (227)
 78 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.7 4.7E-17 3.4E-21  169.3  15.8   85  133-217    30-116 (242)
 79 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.7   2E-16 1.5E-20  164.4  18.6  199  229-428    30-233 (242)
 80 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 1.4E-16   1E-20  161.6  15.8  179   91-284    30-208 (210)
 81 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 2.4E-16 1.8E-20  159.8  16.6  179  116-308    30-208 (210)
 82 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.7 1.5E-19 1.1E-23  206.9  -9.6  374  204-577     2-440 (460)
 83 d2omxa2 c.10.2.1 (A:37-235) In  99.7 2.9E-16 2.1E-20  157.8  15.1  127  153-289    59-185 (199)
 84 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7 8.5E-17 6.2E-21  160.8  10.7  127  303-432    11-138 (192)
 85 d2omxa2 c.10.2.1 (A:37-235) In  99.7 8.5E-16 6.2E-20  154.4  18.0  160  110-281    40-199 (199)
 86 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7 2.3E-16 1.7E-20  157.6  12.9  128  135-265    11-139 (192)
 87 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.6 6.1E-19 4.5E-23  201.7  -7.6  106   62-168     3-124 (460)
 88 d2astb2 c.10.1.3 (B:2136-2419)  99.5 3.1E-15 2.2E-19  159.1   1.9  125   88-214     3-131 (284)
 89 d1a9na_ c.10.2.4 (A:) Spliceso  99.4 4.8E-14 3.5E-18  135.7   8.2  113   79-193    12-125 (162)
 90 d2astb2 c.10.1.3 (B:2136-2419)  99.4 1.5E-14 1.1E-18  153.7   1.2  219   65-286     4-235 (284)
 91 d1dcea3 c.10.2.2 (A:444-567) R  99.4 3.2E-13 2.3E-17  123.5  10.0  100  114-216     2-102 (124)
 92 d1a9na_ c.10.2.4 (A:) Spliceso  99.4 1.1E-13 7.7E-18  133.3   6.2  110  129-241    15-125 (162)
 93 d1dcea3 c.10.2.2 (A:444-567) R  99.3 3.8E-12 2.7E-16  116.2  11.8   87  200-289    16-103 (124)
 94 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.3 8.2E-14   6E-18  152.5   0.3  242  318-576    25-315 (344)
 95 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.3 1.2E-13 8.6E-18  151.2   0.8   90   79-168    25-133 (344)
 96 d2ifga3 c.10.2.7 (A:36-191) Hi  99.2 3.5E-11 2.5E-15  114.6  10.8  109  468-578     9-118 (156)
 97 d1m9la_ c.10.3.1 (A:) Outer ar  99.1   1E-12 7.5E-17  130.9  -4.1  125  441-569    45-180 (198)
 98 d1m9la_ c.10.3.1 (A:) Outer ar  99.1 1.2E-12   9E-17  130.3  -4.0   86  200-288    66-152 (198)
 99 d2ifga3 c.10.2.7 (A:36-191) Hi  99.1 1.9E-10 1.4E-14  109.3  11.4   91  197-288    24-115 (156)
100 d1koha1 c.10.2.3 (A:201-362) m  98.3 3.5E-08 2.5E-12   94.0   0.2  100  469-569    44-152 (162)
101 d1koha1 c.10.2.3 (A:201-362) m  98.0 1.8E-07 1.3E-11   88.9  -1.5   84  247-330    60-152 (162)
102 d1j7la_ d.144.1.6 (A:) Type II  97.8 0.00013 9.7E-09   74.3  15.3   97  696-796    27-123 (263)
103 d1nd4a_ d.144.1.6 (A:) Aminogl  97.2 0.00054 3.9E-08   69.1   9.8   68  697-768    25-93  (255)
104 d1pgva_ c.10.1.1 (A:) Tropomod  97.0  0.0001 7.3E-09   69.6   2.2   86  488-573    41-141 (167)
105 d1pgva_ c.10.1.1 (A:) Tropomod  96.9 0.00017 1.2E-08   67.9   2.5   62  226-287    70-142 (167)
106 d2pula1 d.144.1.6 (A:5-396) Me  96.3  0.0076 5.5E-07   64.7  11.7   76  690-767    33-117 (392)
107 d1io0a_ c.10.1.1 (A:) Tropomod  95.4  0.0013 9.1E-08   61.6  -0.1   13   82-94     14-26  (166)
108 d1io0a_ c.10.1.1 (A:) Tropomod  95.3  0.0011 8.3E-08   61.9  -0.5   87  488-574    43-143 (166)
109 d1zyla1 d.144.1.6 (A:4-328) Rd  90.3     0.4 2.9E-05   49.1   9.7   68  698-767    37-110 (325)
110 d1nw1a_ d.144.1.8 (A:) Choline  88.2    0.44 3.2E-05   50.2   8.3   72  691-768    50-128 (395)
111 d2ppqa1 d.144.1.6 (A:5-320) Ho  49.8     5.2 0.00038   39.8   4.1   31  798-830   181-211 (316)
112 d1cjaa_ d.144.1.3 (A:) Actin-f  24.4      45  0.0033   32.3   5.7  125  697-829    82-234 (342)

No 1  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-46  Score=398.53  Aligned_cols=242  Identities=19%  Similarity=0.335  Sum_probs=187.3

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      +....+|+|+||.||+|+. .++..||||++.. .....++|.+|+..+.+ ++|||||+++|+|.+++..++|||||++
T Consensus         8 ~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~i~~-~~~~~~~~~~E~~~l~~-l~HpnIv~~~g~~~~~~~~~lv~E~~~~   84 (263)
T d1sm2a_           8 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIRE-GAMSEEDFIEEAEVMMK-LSHPKLVQLYGVCLEQAPICLVFEFMEH   84 (263)
T ss_dssp             EEEEEEECCSSCCEEEEEE-TTTEEEEEEECCS-SSSCHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EEEEEEeeCCCeEEEEEEE-CCCCEEEEEEECC-CcCcHHHHHHHHHHHHh-cCCCCcccccceeccCCceEEEEEecCC
Confidence            3455679999999999997 6788899998754 33445678999988888 6999999999999999999999999999


Q ss_pred             CCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105          766 KELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------  834 (966)
Q Consensus       766 g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------  834 (966)
                      |+|.++++.    ++|..+.+++.|||+||+|||   +.+|+||||||+|||+|+++  .+|++|||++....       
T Consensus        85 g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~  159 (263)
T d1sm2a_          85 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDDQYTSS  159 (263)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGG--CEEECSCC-------------
T ss_pred             CcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCC--CeEecccchheeccCCCceee
Confidence            999999863    789999999999999999999   45899999999999999765  57899999986421       


Q ss_pred             CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105          835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS  914 (966)
Q Consensus       835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  914 (966)
                      ....||+.|||||++.+..|+.|+|||||||++|||+||..|+..... ...+.+.+....   ..   ..|   ...+ 
T Consensus       160 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~~~~~~~i~~~~---~~---~~p---~~~~-  228 (263)
T d1sm2a_         160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-NSEVVEDISTGF---RL---YKP---RLAS-  228 (263)
T ss_dssp             -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-HHHHHHHHHHTC---CC---CCC---TTSC-
T ss_pred             cceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-HHHHHHHHHhcC---CC---CCc---cccC-
Confidence            224678999999999999999999999999999999996544433222 222222222111   10   111   1111 


Q ss_pred             hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          915 IQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                           .++.+++.+||+.||++||||+||+++|++ ++
T Consensus       229 -----~~l~~li~~cl~~~p~~Rps~~~il~~L~~-i~  260 (263)
T d1sm2a_         229 -----THVYQIMNHCWKERPEDRPAFSRLLRQLAE-IA  260 (263)
T ss_dssp             -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH-HH
T ss_pred             -----HHHHHHHHHHccCCHhHCcCHHHHHHHHHH-HH
Confidence                 356788899999999999999999999998 44


No 2  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=9e-46  Score=401.60  Aligned_cols=243  Identities=19%  Similarity=0.311  Sum_probs=185.7

Q ss_pred             ccCCCCCccEEEEEEEecCCc---EEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          689 TSRGKKGVSSSYKVRSLANDM---QFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       689 ~~~g~~g~~~vy~~~~~~~~~---~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      ..+|+|+||.||+|+...++.   .||||++... .....++|.+|+..+.+ ++|||||+++|+|.+++..|+|||||+
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~~~~~~iv~Ey~~  110 (299)
T d1jpaa_          32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDHPNVIHLEGVVTKSTPVMIITEFME  110 (299)
T ss_dssp             EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh-CCCCCCccEEEEEeeCCEEEEEEEecC
Confidence            357999999999999866554   5788877543 22334568899988888 699999999999999999999999999


Q ss_pred             CCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105          765 GKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------  834 (966)
Q Consensus       765 ~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------  834 (966)
                      +|+|.++++.    ++|.++.+++.|||+||+|||   +.+||||||||+|||+|.++  .+|++|||++....      
T Consensus       111 ~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~  185 (299)
T d1jpaa_         111 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDTSDP  185 (299)
T ss_dssp             TEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTC--CEEECCC-------------
T ss_pred             CCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCC--cEEECCcccceEccCCCCcc
Confidence            9999998863    899999999999999999999   45899999999999999765  47899999986421      


Q ss_pred             -----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccc
Q 002105          835 -----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFI  908 (966)
Q Consensus       835 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  908 (966)
                           ....+|+.|||||++.++.|+.++|||||||++|||+| |+.||....  ...+...+.   .+...      ..
T Consensus       186 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~--~~~~~~~i~---~~~~~------~~  254 (299)
T d1jpaa_         186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT--NQDVINAIE---QDYRL------PP  254 (299)
T ss_dssp             ----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHH---TTCCC------CC
T ss_pred             eeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC------CC
Confidence                 11246889999999999999999999999999999998 899986532  222222222   11111      11


Q ss_pred             cCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105          909 RGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS  954 (966)
Q Consensus       909 ~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~  954 (966)
                      ...++      .++.+++.+||+.||++||||+||++.|+++++.+
T Consensus       255 ~~~~~------~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p  294 (299)
T d1jpaa_         255 PMDCP------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP  294 (299)
T ss_dssp             CTTCC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             Cccch------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence            11122      35677889999999999999999999999977654


No 3  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-45  Score=393.73  Aligned_cols=241  Identities=19%  Similarity=0.313  Sum_probs=191.0

Q ss_pred             ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105          687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK  766 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g  766 (966)
                      ....+|+||||.||+|+. .++..||||++... ....++|.+|+..+.+ ++|||||+++|+|.+ +..|+|||||++|
T Consensus        17 ~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~-l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g   92 (272)
T d1qpca_          17 LVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQG-SMSPDAFLAEANLMKQ-LQHQRLVRLYAVVTQ-EPIYIITEYMENG   92 (272)
T ss_dssp             EEEEEEEETTEEEEEEEE-TTTEEEEEEEECTT-SSCHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred             EeEEEecCCCcEEEEEEE-CCCCEEEEEEEccC-cCCHHHHHHHHHHHHh-CCCCCEeEEEeeecc-CCeEEEEEeCCCC
Confidence            344579999999999997 67888999988543 3345679999998888 699999999998865 5679999999999


Q ss_pred             CHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105          767 ELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------  834 (966)
Q Consensus       767 ~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------  834 (966)
                      +|.+++.     .++|..+.+|+.|||+||+|||   ..+||||||||+|||+|++.  .+|++|||++....       
T Consensus        93 ~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~--~~Kl~DFGla~~~~~~~~~~~  167 (272)
T d1qpca_          93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAR  167 (272)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTS--CEEECCCTTCEECSSSCEECC
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeeccc--ceeeccccceEEccCCccccc
Confidence            9999874     4899999999999999999999   45899999999999999765  46899999986532       


Q ss_pred             CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105          835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS  914 (966)
Q Consensus       835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  914 (966)
                      ....||+.|||||++.++.++.|+|||||||++|||+||..|+.......+ +...+..   +      ..+......+ 
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~-~~~~i~~---~------~~~~~p~~~~-  236 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQNLER---G------YRMVRPDNCP-  236 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHT---T------CCCCCCTTCC-
T ss_pred             cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh---c------CCCCCcccCh-
Confidence            234678899999999989999999999999999999997666543322222 2222221   1      1111122222 


Q ss_pred             hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          915 IQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                           .++.+++.+||+.||++||||+||+++|+.++.
T Consensus       237 -----~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         237 -----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                 256778899999999999999999999998654


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-44  Score=389.15  Aligned_cols=240  Identities=18%  Similarity=0.263  Sum_probs=193.6

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      +..+..+|+|+||.||+|++..+|+.||||++........+.+.+|+..+.+ ++|||||++++++.+++..|+|||||+
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHh-CCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            4556678999999999999989999999999876554445568888887777 799999999999999999999999999


Q ss_pred             CCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------CC
Q 002105          765 GKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------SK  836 (966)
Q Consensus       765 ~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------~~  836 (966)
                      ||+|.++++  .+++.+...++.||+.||+|||   +.+||||||||+|||++.++  .++++|||++....      ..
T Consensus       101 gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~--~vkl~DFG~a~~~~~~~~~~~~  175 (293)
T d1yhwa1         101 GGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRST  175 (293)
T ss_dssp             TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSTTCCBCC
T ss_pred             CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCC--cEeeccchhheeeccccccccc
Confidence            999999886  4899999999999999999999   55999999999999998654  58999999986532      23


Q ss_pred             CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105          837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ  916 (966)
Q Consensus       837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  916 (966)
                      .+||+.|||||++.+..|+.++||||+||++|||+||+.||.+... .+.+......    ..    .+.......+   
T Consensus       176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-~~~~~~~~~~----~~----~~~~~~~~~s---  243 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LRALYLIATN----GT----PELQNPEKLS---  243 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHH----CS----CCCSSGGGSC---
T ss_pred             cccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH-HHHHHHHHhC----CC----CCCCCcccCC---
Confidence            4699999999999999999999999999999999999999975321 1212111111    10    0001111111   


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          917 NEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                         .++.+++.+|++.||++|||++|+++
T Consensus       244 ---~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         244 ---AIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             ---HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence               24566788999999999999999865


No 5  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=4e-45  Score=394.04  Aligned_cols=244  Identities=20%  Similarity=0.314  Sum_probs=195.7

Q ss_pred             ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105          687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK  766 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g  766 (966)
                      ....+|+|+||.||+|++..+++.||||++.. +....++|.+|+..+.+ ++|||||+++|+|.+++..|+|||||++|
T Consensus        21 ~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~-~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~iv~E~~~~g   98 (287)
T d1opja_          21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTYG   98 (287)
T ss_dssp             EEEETTTTTTSSEEEEEEGGGTEEEEEEECCT-TCSCHHHHHHHHHHHHH-CCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             EeeEEeeCCCeEEEEEEECCCCeEEEEEEECC-ccchHHHHHHHHHHHHh-CCCCCEecCCccEeeCCeeEEEeecccCc
Confidence            34568999999999999988899999998754 33345678999988888 69999999999999999999999999999


Q ss_pred             CHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC------
Q 002105          767 ELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS------  835 (966)
Q Consensus       767 ~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~------  835 (966)
                      +|.++++     .++|..+..++.|||+||+|||   +.+||||||||+|||+|+++  .+|++|||++.....      
T Consensus        99 ~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~--~~Kl~DFG~a~~~~~~~~~~~  173 (287)
T d1opja_          99 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGDTYTAH  173 (287)
T ss_dssp             BHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG--CEEECCCCCTTTCCSSSSEEE
T ss_pred             chHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCC--cEEEccccceeecCCCCceee
Confidence            9999985     3799999999999999999999   45899999999999999764  579999999864321      


Q ss_pred             -CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcc
Q 002105          836 -KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSS  914 (966)
Q Consensus       836 -~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  914 (966)
                       ...|++.|||||++.+..|+.|+|||||||++|||+||..|+..... ...+.+.+..   +      ..+......+ 
T Consensus       174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~~~~~i~~---~------~~~~~~~~~~-  242 (287)
T d1opja_         174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEK---D------YRMERPEGCP-  242 (287)
T ss_dssp             TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHT---T------CCCCCCTTCC-
T ss_pred             ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHHHHHHHhc---C------CCCCCCccch-
Confidence             22468899999999999999999999999999999998777654322 2222222221   1      1111112222 


Q ss_pred             hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105          915 IQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI  953 (966)
Q Consensus       915 ~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~  953 (966)
                           .++.+++.+||+.||++||||+||++.|+.+...
T Consensus       243 -----~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         243 -----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             -----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                 2567788999999999999999999999985443


No 6  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-45  Score=388.38  Aligned_cols=239  Identities=20%  Similarity=0.335  Sum_probs=188.0

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      +....+|+|+||.||+|++..+|+.||||++.... ....+.+.+|+..+.+ ++|||||++++++.+++..|+|||||+
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHT-CCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHh-CCCCCEeeEeeeeccCceeEEEEeccC
Confidence            44556799999999999998899999999986543 2234568889888877 799999999999999999999999999


Q ss_pred             CCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--------
Q 002105          765 GKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--------  833 (966)
Q Consensus       765 ~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--------  833 (966)
                      +|+|.++++   .+++.+...++.||++||+|||   +.+||||||||+|||+++++  .+|++|||++...        
T Consensus        87 gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~--~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          87 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTC--CEEECCCTTCEECEETTEECC
T ss_pred             CCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCC--CEEEccchhheeeccCCcccc
Confidence            999999985   4899999999999999999999   45899999999999998764  5799999998642        


Q ss_pred             CCCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105          834 DSKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV  912 (966)
Q Consensus       834 ~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  912 (966)
                      ....+||+.|||||++.+..+ +.++||||+||++|||+||+.||............+..   ....    ..+  ....
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~---~~~~----~~~--~~~~  232 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTY----LNP--WKKI  232 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHT---TCTT----STT--GGGS
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhc---CCCC----CCc--cccC
Confidence            234579999999999988776 57899999999999999999999754332222211111   0000    010  0011


Q ss_pred             cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                         .+   ++.+++.+|++.||++|||++||++
T Consensus       233 ---s~---~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         233 ---DS---APLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             ---CH---HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---CH---HHHHHHHHHcCCChhHCcCHHHHhc
Confidence               12   4556778999999999999999864


No 7  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.3e-45  Score=389.35  Aligned_cols=243  Identities=20%  Similarity=0.301  Sum_probs=185.3

Q ss_pred             cccCCCCCccEEEEEEEecCCcEEEEEEEecc--CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV--NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      ...+|+|+||.||+|+.   ...||||++...  .....+.|.+|+..+.+ ++|||||+++|++.+ +..++|||||++
T Consensus        13 ~~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~~~~~~~~-~~~~lv~Ey~~~   87 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNILLFMGYSTA-PQLAIVTQWCEG   87 (276)
T ss_dssp             CSEEEECSSCEEEEEES---SSEEEEEECCCSSCCTTHHHHHHHHHHHHTT-CCCTTBCCEEEEECS-SSCEEEEECCCE
T ss_pred             EEEEeeCCCcEEEEEEE---CCEEEEEEEEcccCCHHHHHHHHHHHHHHHh-CCCCCEeeeeEEEec-cEEEEEEecCCC
Confidence            34579999999999975   235999988543  22334568888888888 699999999999865 568999999999


Q ss_pred             CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-------
Q 002105          766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-------  834 (966)
Q Consensus       766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-------  834 (966)
                      |+|.++++    .++|..+.+++.|||+||+|||   +.+||||||||+|||+|.+.  .+|++|||++....       
T Consensus        88 g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~--~~Kl~DFGla~~~~~~~~~~~  162 (276)
T d1uwha_          88 SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQ  162 (276)
T ss_dssp             EEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTS--SEEECCCCCSCC---------
T ss_pred             CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCC--CEEEccccceeeccccCCccc
Confidence            99999995    3899999999999999999999   45899999999999999765  46899999985421       


Q ss_pred             -CCCcCCcccccccccCC---CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105          835 -SKSINSSAYVAPETKES---KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG  910 (966)
Q Consensus       835 -~~~~~~~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  910 (966)
                       ....||+.|||||++.+   ..|+.|+|||||||++|||+||+.||.+... ...+...+.........     +.+..
T Consensus       163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~-~~~~~~~~~~~~~~p~~-----~~~~~  236 (276)
T d1uwha_         163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIFMVGRGYLSPDL-----SKVRS  236 (276)
T ss_dssp             ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHTSCCCCG-----GGSCT
T ss_pred             ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh-HHHHHHHHhcCCCCCcc-----hhccc
Confidence             23468999999999864   4589999999999999999999999975422 22221222211111000     01111


Q ss_pred             CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      .++      .++.+++.+||+.||++||||+||++.|+.+.+
T Consensus       237 ~~~------~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         237 NCP------KAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cch------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            222      356678889999999999999999999998433


No 8  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-44  Score=383.55  Aligned_cols=236  Identities=22%  Similarity=0.341  Sum_probs=190.0

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY  762 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey  762 (966)
                      +....+|+|+||.||+|+...+++.||+|++....   ....+.+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus         9 ~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           9 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH-LRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHh-cCCCCCCeEEEEEEECCEEEEEEee
Confidence            34456799999999999998899999999986432   2233457778877777 7999999999999999999999999


Q ss_pred             cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC----
Q 002105          763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS----  835 (966)
Q Consensus       763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~----  835 (966)
                      |++|+|.++++   .+++.....++.||++||+|||   +.+||||||||+|||++.++  .+|++|||++.....    
T Consensus        88 ~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~--~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          88 APLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEECCCCSCSCCCCCCCE
T ss_pred             cCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCC--CEeecccceeeecCCCccc
Confidence            99999999986   4899999999999999999999   45899999999999999764  478999999865332    


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ...||+.|||||++.+..|+.++|||||||++|||+||+.||.+..  .....+.+.   .       .++.++...+  
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--~~~~~~~i~---~-------~~~~~p~~~s--  228 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--YQETYKRIS---R-------VEFTFPDFVT--  228 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHH---T-------TCCCCCTTSC--
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC--HHHHHHHHH---c-------CCCCCCccCC--
Confidence            2468999999999999999999999999999999999999997542  111111111   1       1111111222  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                       +   ++.+++.+|++.||++|||++||++
T Consensus       229 -~---~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         229 -E---GARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             -H---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -H---HHHHHHHHHccCCHhHCcCHHHHHc
Confidence             2   4566788999999999999999975


No 9  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-44  Score=387.08  Aligned_cols=239  Identities=18%  Similarity=0.284  Sum_probs=192.4

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      +.+..+|+|+||.||+|+...+|..||||++........+.|.+|+..+.+ ++|||||++++++.+++..|+|||||++
T Consensus        15 ~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          15 EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS-CDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHH-CCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence            345568999999999999988999999999876655566788999988887 7999999999999999999999999999


Q ss_pred             CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------CC
Q 002105          766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------DS  835 (966)
Q Consensus       766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------~~  835 (966)
                      |+|.+++.    .+++.++..++.||++||+|||   +.+||||||||+|||++.++  .+|++|||++...      ..
T Consensus        94 g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~--~~Kl~DFG~a~~~~~~~~~~~  168 (288)
T d2jfla1          94 GAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRRD  168 (288)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECHHHHHHHT
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCC--CEEEEechhhhccCCCccccc
Confidence            99999874    3899999999999999999999   45899999999999999765  4789999998542      24


Q ss_pred             CCcCCcccccccccC-----CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105          836 KSINSSAYVAPETKE-----SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG  910 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~-----~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  910 (966)
                      ...||+.|||||++.     ...|+.|+|||||||++|||+||+.||.+.. ..+........    . ......|   .
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~-~~~~~~~i~~~----~-~~~~~~~---~  239 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN-PMRVLLKIAKS----E-PPTLAQP---S  239 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC-GGGHHHHHHHS----C-CCCCSSG---G
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcC----C-CCCCCcc---c
Confidence            567999999999873     5668999999999999999999999997542 22222122111    0 0000000   1


Q ss_pred             CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      ..   .   .++.+++.+||+.||++|||++|+++
T Consensus       240 ~~---s---~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         240 RW---S---SNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             GS---C---HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cC---C---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11   1   24567788999999999999999865


No 10 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-44  Score=388.90  Aligned_cols=244  Identities=20%  Similarity=0.312  Sum_probs=188.5

Q ss_pred             cCCCCCccEEEEEEEecCC----cEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          690 SRGKKGVSSSYKVRSLAND----MQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~~~----~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      .+|+||||.||+|....++    ..||||++.... .....+|.+|+..+.+ ++|||||+++|+|.+++..++|||||+
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~-l~H~nIv~~~g~~~~~~~~~~v~e~~~   92 (283)
T d1mqba_          14 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ-FSHHNIIRLEGVISKYKPMMIITEYME   92 (283)
T ss_dssp             EEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             EEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHh-cCCCCEeeeeEEEecCCceEEEEEecc
Confidence            4688999999999976544    469999986432 2233468889988888 699999999999999999999999999


Q ss_pred             CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105          765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------  834 (966)
Q Consensus       765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------  834 (966)
                      +|++.+++.    .++|.++.+++.|||.||+|||   +.+||||||||+|||+|.++  .+|++|||++....      
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~~~~  167 (283)
T d1mqba_          93 NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEAT  167 (283)
T ss_dssp             TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTC--CEEECCCCC-----------
T ss_pred             cCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCC--eEEEcccchhhcccCCCccc
Confidence            999998875    4899999999999999999999   45899999999999999765  57899999986421      


Q ss_pred             ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCC
Q 002105          835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGH  911 (966)
Q Consensus       835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  911 (966)
                         ....||+.|||||++.++.++.|+|||||||++|||+||..|+....... .+.+.+.   .+.      .+.....
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-~~~~~i~---~~~------~~~~~~~  237 (283)
T d1mqba_         168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAIN---DGF------RLPTPMD  237 (283)
T ss_dssp             ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHH---TTC------CCCCCTT
T ss_pred             eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-HHHHHHh---ccC------CCCCchh
Confidence               12357889999999999999999999999999999999776655432222 2222222   111      1111111


Q ss_pred             CcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCC
Q 002105          912 VSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISS  955 (966)
Q Consensus       912 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~  955 (966)
                      .+      .++.+++.+||+.||++||||+||+++|+++++.++
T Consensus       238 ~~------~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~  275 (283)
T d1mqba_         238 CP------SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  275 (283)
T ss_dssp             CB------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             hH------HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCcc
Confidence            22      356778899999999999999999999999776554


No 11 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-44  Score=386.36  Aligned_cols=242  Identities=24%  Similarity=0.307  Sum_probs=180.6

Q ss_pred             cccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEec--CCeeEEE
Q 002105          684 TEENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS--EKAAYLV  759 (966)
Q Consensus       684 ~~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~--~~~~~lv  759 (966)
                      +++.+..+|+|+||.||+|+...+|+.||||++....  ....+.+.+|+..+.+ ++|||||++++++.+  ++..|+|
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-LKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTS-CCCTTBCCEEEEEEC----CEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHH-CCCCCEeeEEEEEEeCCCCEEEEE
Confidence            3455667899999999999998999999999986442  2223457788877777 799999999999864  4668999


Q ss_pred             EEccCCCCHHHHHH-------cCCHHHHHHHHHHHHHHHHHHhhcC--CCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105          760 YEYIEGKELSEVLR-------NLSWERRRKVAIGIAKALRFLHFHC--SPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA  830 (966)
Q Consensus       760 ~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~l~yLH~~~--~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~  830 (966)
                      ||||++|+|.++++       .+++...+.++.||+.||+|||+..  ..+||||||||+|||++.++  .+|++|||++
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~--~vkl~DFG~a  161 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLA  161 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS--CEEECCHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC--cEEEeeccce
Confidence            99999999999985       3899999999999999999999642  24699999999999999764  5799999998


Q ss_pred             eec------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccc
Q 002105          831 YCT------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWV  904 (966)
Q Consensus       831 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  904 (966)
                      ...      .....||+.|||||++.+..|+.|+|||||||++|||+||+.||.+..  ...+...+..    ...    
T Consensus       162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~--~~~~~~~i~~----~~~----  231 (269)
T d2java1         162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIRE----GKF----  231 (269)
T ss_dssp             HHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHH----TCC----
T ss_pred             eecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC--HHHHHHHHHc----CCC----
Confidence            542      233578999999999999999999999999999999999999997532  1212121111    111    


Q ss_pred             cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                       +.+...++   +   ++.+++.+||+.||++|||++|+++
T Consensus       232 -~~~~~~~s---~---~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         232 -RRIPYRYS---D---ELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             -CCCCTTSC---H---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -CCCCcccC---H---HHHHHHHHHcCCChhHCcCHHHHHh
Confidence             11112222   2   4567778999999999999999864


No 12 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-44  Score=386.87  Aligned_cols=239  Identities=18%  Similarity=0.277  Sum_probs=189.2

Q ss_pred             cCCCCCccEEEEEEEe--cCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105          690 SRGKKGVSSSYKVRSL--ANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK  766 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~--~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g  766 (966)
                      .+|+|+||.||+|...  .++..||||++.... ....++|.+|+..+.+ ++|||||+++|+|.+ +..|+|||||++|
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~g~~~~-~~~~lvmE~~~~g   93 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ-LDNPYIVRLIGVCQA-EALMLVMEMAGGG   93 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHH-CCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHh-CCCCCEeeEeeeecc-CeEEEEEEeCCCC
Confidence            3699999999999764  345579999986443 2334568899988888 699999999999975 4589999999999


Q ss_pred             CHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--------
Q 002105          767 ELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--------  834 (966)
Q Consensus       767 ~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--------  834 (966)
                      +|.+++.    .++|..+.+++.|||+||+|||   +.+||||||||+||+++.+.  .+|++|||++....        
T Consensus        94 ~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~~~  168 (285)
T d1u59a_          94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTA  168 (285)
T ss_dssp             EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETT--EEEECCCTTCEECTTCSCEECC
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCC--ceeeccchhhhccccccccccc
Confidence            9999984    3899999999999999999999   45899999999999999654  67999999986422        


Q ss_pred             -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105          835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV  912 (966)
Q Consensus       835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  912 (966)
                       ....||+.|||||++.++.++.|+|||||||++|||+| |+.||.... .. .+...+.   .+..      +.++..+
T Consensus       169 ~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-~~-~~~~~i~---~~~~------~~~p~~~  237 (285)
T d1u59a_         169 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-GP-EVMAFIE---QGKR------MECPPEC  237 (285)
T ss_dssp             CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-TH-HHHHHHH---TTCC------CCCCTTC
T ss_pred             ccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-HH-HHHHHHH---cCCC------CCCCCcC
Confidence             23457889999999999999999999999999999998 899997542 12 2222221   1111      1111222


Q ss_pred             cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      +      .++.+++.+||+.||++||||.+|+++|+.++.
T Consensus       238 ~------~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         238 P------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             C------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             C------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            2      256678899999999999999999999998553


No 13 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-44  Score=381.28  Aligned_cols=237  Identities=21%  Similarity=0.317  Sum_probs=184.7

Q ss_pred             cCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEcc
Q 002105          690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEYI  763 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey~  763 (966)
                      .+|+||||.||+|++..++..||+|++....  ....+.|.+|++.+.+ ++|||||+++|+|.+    ++..|+|||||
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~   94 (270)
T d1t4ha_          16 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-LQHPNIVRFYDSWESTVKGKKCIVLVTELM   94 (270)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred             EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEeeccccCCEEEEEEeCC
Confidence            4799999999999998899999999986542  2233457888888877 799999999999865    35689999999


Q ss_pred             CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC----C
Q 002105          764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS----K  836 (966)
Q Consensus       764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~----~  836 (966)
                      ++|+|.++++   .+++.....++.||++||+|||+. .++||||||||+|||++++ ...+|++|||++.....    .
T Consensus        95 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~-~~~~Kl~DFGla~~~~~~~~~~  172 (270)
T d1t4ha_          95 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKRASFAKA  172 (270)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCCTTSBEE
T ss_pred             CCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCC-CCCEEEeecCcceeccCCccCC
Confidence            9999999996   489999999999999999999954 3459999999999999742 24589999999865322    3


Q ss_pred             CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105          837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ  916 (966)
Q Consensus       837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  916 (966)
                      .+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ...+.+.+   ..+..     .+.+....+   
T Consensus       173 ~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-~~~~~~~i---~~~~~-----~~~~~~~~~---  239 (270)
T d1t4ha_         173 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRV---TSGVK-----PASFDKVAI---  239 (270)
T ss_dssp             SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHH---TTTCC-----CGGGGGCCC---
T ss_pred             cccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc-HHHHHHHH---HcCCC-----CcccCccCC---
Confidence            479999999998865 599999999999999999999999965322 22121111   11111     111111111   


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          917 NEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                         .++.+++.+||+.||++|||++|+++
T Consensus       240 ---~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         240 ---PEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             ---HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---HHHHHHHHHHccCCHhHCcCHHHHhC
Confidence               24567888999999999999999865


No 14 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-44  Score=383.36  Aligned_cols=238  Identities=17%  Similarity=0.245  Sum_probs=186.0

Q ss_pred             cCCCCCccEEEEEEEec--CCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          690 SRGKKGVSSSYKVRSLA--NDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~--~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      .+|+|+||.||+|....  .++.||||++....  ....++|.+|+..+.+ ++|||||+++|+|..+ ..+||||||++
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ-LDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHT-CCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHh-CCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            47999999999998643  34689999985432  2223568899988888 6999999999999754 57899999999


Q ss_pred             CCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--------
Q 002105          766 KELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--------  834 (966)
Q Consensus       766 g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--------  834 (966)
                      |+|.++++.   ++|..+.+++.|||+||+|||   +.+||||||||+|||++.++  .++++|||++....        
T Consensus        92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~--~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTTCSEEEC
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccC--cccccchhhhhhcccccccccc
Confidence            999999963   899999999999999999999   45899999999999999654  57899999986421        


Q ss_pred             -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105          835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV  912 (966)
Q Consensus       835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  912 (966)
                       ....||+.|||||.+.+..++.++|||||||++|||+| |+.||.+..  ...+.+.+.   .+..      +..+..+
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~--~~~~~~~i~---~~~~------~~~p~~~  235 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLE---KGER------MGCPAGC  235 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH---TTCC------CCCCTTC
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC--HHHHHHHHH---cCCC------CCCCccc
Confidence             22468899999999999999999999999999999998 899987532  122222221   1111      1111222


Q ss_pred             cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhh
Q 002105          913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCF  951 (966)
Q Consensus       913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~  951 (966)
                      +      .++.+++.+||+.||++||||+||+++|+..+
T Consensus       236 ~------~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         236 P------REMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             C------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             C------HHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence            2      25667889999999999999999999998754


No 15 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.1e-44  Score=384.74  Aligned_cols=246  Identities=18%  Similarity=0.258  Sum_probs=191.8

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      .....+|+|+||.||+|+. .++..||||++.. .....+.|.+|+..+.+ ++|||||+++|+|.+ +..++|||||++
T Consensus        20 ~i~~~iG~G~fg~Vy~~~~-~~~~~vAiK~l~~-~~~~~~~~~~E~~~l~~-l~h~nIv~~~g~~~~-~~~~lv~Ey~~~   95 (285)
T d1fmka3          20 RLEVKLGQGCFGEVWMGTW-NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKK-LRHEKLVQLYAVVSE-EPIYIVTEYMSK   95 (285)
T ss_dssp             EEEEEEEECSSCEEEEEEE-TTTEEEEEEECCT-TSSCHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             EEeeEEeeCCCeEEEEEEE-CCCCEEEEEEECc-ccCCHHHHHHHHHHHHh-cccCCEeEEEEEEec-CCeEEEEEecCC
Confidence            3444579999999999997 6667899999753 34445679999988888 799999999999854 568999999999


Q ss_pred             CCHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105          766 KELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------  834 (966)
Q Consensus       766 g~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------  834 (966)
                      |+|..++.     .++|.++..++.|||.||+|||   ..+|+||||||+|||+|.++  .++++|||++....      
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~--~~kl~DfGla~~~~~~~~~~  170 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL--VCKVADFGLARLIEDNEYTA  170 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG--CEEECCCCTTC---------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCC--cEEEcccchhhhccCCCcee
Confidence            99998885     3899999999999999999999   45899999999999999764  47899999985421      


Q ss_pred             -CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105          835 -SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS  913 (966)
Q Consensus       835 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  913 (966)
                       ....||+.|||||++..+.++.++|||||||++|||+||..|+.......+. ..++..   +.      .+......+
T Consensus       171 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~-~~~i~~---~~------~~~~~~~~~  240 (285)
T d1fmka3         171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-LDQVER---GY------RMPCPPECP  240 (285)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HHHHHT---TC------CCCCCTTSC
T ss_pred             eccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHH-HHHHHh---cC------CCCCCcccC
Confidence             2246789999999999999999999999999999999977776543332222 233321   11      111112222


Q ss_pred             chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccCCc
Q 002105          914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRISSC  956 (966)
Q Consensus       914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~~~  956 (966)
                            .++.+++.+||+.||++||||++|+++|+..+....+
T Consensus       241 ------~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         241 ------ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             ------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             ------HHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence                  2566788999999999999999999999996665443


No 16 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-44  Score=392.58  Aligned_cols=243  Identities=22%  Similarity=0.273  Sum_probs=191.3

Q ss_pred             cccccCCCCCccEEEEEEEecCCc-----EEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDM-----QFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV  759 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~-----~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv  759 (966)
                      +....+|+||||.||+|+....+.     .||||++... .......|.+|+..+.++.+|||||+++|+|.+++..|+|
T Consensus        40 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv  119 (325)
T d1rjba_          40 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI  119 (325)
T ss_dssp             EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             EEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEE
Confidence            344567999999999999865443     6889988643 3334456888999888865899999999999999999999


Q ss_pred             EEccCCCCHHHHHHc--------------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEE
Q 002105          760 YEYIEGKELSEVLRN--------------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVI  813 (966)
Q Consensus       760 ~Ey~~~g~L~~~l~~--------------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nil  813 (966)
                      ||||++|+|.++|+.                          ++|..+..++.|||+||+|||   +.+||||||||+||+
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~Nil  196 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVL  196 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEE
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCchhccc
Confidence            999999999999952                          789999999999999999999   458999999999999


Q ss_pred             EcCCCCceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCch
Q 002105          814 VDGKDEPHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVH  884 (966)
Q Consensus       814 l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~  884 (966)
                      ++.+  ..+|++|||++....        ....||+.|||||++.++.|+.++|||||||++|||+| |+.||.+... .
T Consensus       197 l~~~--~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~-~  273 (325)
T d1rjba_         197 VTHG--KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-D  273 (325)
T ss_dssp             EETT--TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-S
T ss_pred             cccC--CeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH-H
Confidence            9965  468999999986421        23356899999999999999999999999999999998 8999975432 2


Q ss_pred             hhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105          885 ESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES  949 (966)
Q Consensus       885 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~  949 (966)
                      +.+.+.+..   +.      .+......+      .++.+++.+||+.||++||||+||++.|..
T Consensus       274 ~~~~~~~~~---~~------~~~~p~~~~------~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         274 ANFYKLIQN---GF------KMDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHHHT---TC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHhc---CC------CCCCCCcCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            222222221   11      111111222      256778899999999999999999999964


No 17 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-43  Score=374.53  Aligned_cols=239  Identities=18%  Similarity=0.311  Sum_probs=193.9

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      +....+|+|+||.||+|+. .++..||||++... ....++|.+|+..+.+ ++|||||+++|+|.+++..++||||+++
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~-l~HpnIv~~~g~~~~~~~~~iv~Ey~~~   83 (258)
T d1k2pa_           7 TFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEG-SMSEDEFIEEAKVMMN-LSHEKLVQLYGVCTKQRPIFIITEYMAN   83 (258)
T ss_dssp             CCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESS-SSCHHHHHHHHHHHHT-CCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred             EEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcC-cCCHHHHHHHHHHHHh-cCCCceeeEEEEEeeCCceEEEEEccCC
Confidence            3455689999999999997 68889999998653 3345679999998888 6999999999999999999999999999


Q ss_pred             CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-------C
Q 002105          766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-------D  834 (966)
Q Consensus       766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-------~  834 (966)
                      |+|.+++.    .++|..+.+++.|||+||+|||   +.+|+||||||+||++|++.  .+|++|||++...       .
T Consensus        84 g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~  158 (258)
T d1k2pa_          84 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSS  158 (258)
T ss_dssp             EEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTC--CEEECCCSSCCBCSSSSCCCC
T ss_pred             CcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCC--cEEECcchhheeccCCCceee
Confidence            99999975    4899999999999999999999   45899999999999999754  5789999998542       1


Q ss_pred             CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105          835 SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS  913 (966)
Q Consensus       835 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  913 (966)
                      ....+|+.|||||.+.+..++.|+|||||||++|||+| |+.||....  ...+...+.   .....   ..|   ...+
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~--~~~~~~~i~---~~~~~---~~p---~~~~  227 (258)
T d1k2pa_         159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NSETAEHIA---QGLRL---YRP---HLAS  227 (258)
T ss_dssp             CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--HHHHHHHHH---TTCCC---CCC---TTCC
T ss_pred             cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCC--HHHHHHHHH---hCCCC---CCc---cccc
Confidence            23457889999999999999999999999999999998 899987542  222212121   11111   111   1122


Q ss_pred             chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105          914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES  949 (966)
Q Consensus       914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~  949 (966)
                            .++.+++.+||+.||++||||+||++.|.+
T Consensus       228 ------~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         228 ------EKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             ------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             ------HHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence                  356778899999999999999999999875


No 18 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.6e-43  Score=384.74  Aligned_cols=242  Identities=21%  Similarity=0.290  Sum_probs=180.4

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      +....+|+|+||.||+|+...+|+.||||++.... ....+.+.+|+..+.+ ++|||||++++++.+++..|+|||||+
T Consensus        12 ~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~lvmE~~~   90 (307)
T d1a06a_          12 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK-IKHPNIVALDDIYESGGHLYLIMQLVS   90 (307)
T ss_dssp             EEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHT-CCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            34456799999999999998899999999986543 2234567788888877 699999999999999999999999999


Q ss_pred             CCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcC-CCCceEEEeccccceecC-----C
Q 002105          765 GKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDG-KDEPHLRLSVPGLAYCTD-----S  835 (966)
Q Consensus       765 ~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~-~~~~~~~~~~~~~~~~~~-----~  835 (966)
                      ||+|.+++.   .+++.+...++.||+.||+|||   +.+||||||||+||++.. +....++++|||++....     .
T Consensus        91 gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~  167 (307)
T d1a06a_          91 GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS  167 (307)
T ss_dssp             SCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             CCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence            999999996   3899999999999999999999   558999999999999964 234678999999986432     3


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ..+||+.|||||++.+..|+.++||||+||++|||+||+.||.+...  ......+.   .. ...  .++......+  
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~~i~---~~-~~~--~~~~~~~~~s--  237 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQIL---KA-EYE--FDSPYWDDIS--  237 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH---TT-CCC--CCTTTTTTSC--
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHh---cc-CCC--CCCccccCCC--
Confidence            35799999999999999999999999999999999999999975421  11111111   11 100  1111111222  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                          .++.+++.+|++.||++|||++|+++
T Consensus       238 ----~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         238 ----DSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             ----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                24667788999999999999999876


No 19 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.8e-44  Score=391.08  Aligned_cols=191  Identities=20%  Similarity=0.342  Sum_probs=165.1

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI  763 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~  763 (966)
                      ++.+..+|+|+||.||+|++..+|..||+|++.... ....+.+.+|+..+.+ ++|||||+++++|.+++..|+|||||
T Consensus         8 y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~iVmEy~   86 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHM   86 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGG-CCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            455667899999999999998899999999986432 2233457788877776 79999999999999999999999999


Q ss_pred             CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee----cCCC
Q 002105          764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC----TDSK  836 (966)
Q Consensus       764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~----~~~~  836 (966)
                      +||+|.++++   .+++.....++.|+++||+|||+.  .+||||||||+|||++.++  .+|++|||++..    ....
T Consensus        87 ~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~--~vkl~DFGla~~~~~~~~~~  162 (322)
T d1s9ja_          87 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANS  162 (322)
T ss_dssp             TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTC--CEEECCCCCCHHHHHHTC--
T ss_pred             CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCC--CEEEeeCCCccccCCCcccc
Confidence            9999999996   499999999999999999999952  2799999999999998664  579999999864    2345


Q ss_pred             CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCC
Q 002105          837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADAD  880 (966)
Q Consensus       837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~  880 (966)
                      .+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.
T Consensus       163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            68999999999999999999999999999999999999999764


No 20 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=2.2e-43  Score=383.61  Aligned_cols=239  Identities=22%  Similarity=0.296  Sum_probs=189.3

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---ccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ++.+..+|+|+||.||+|+...+|..||||++.......   .+.+.+|+..+.+ ++|||||+++|++.+++..|+|||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHH-CCCCCEeeEEEEEEECCEEEEEEE
Confidence            345667899999999999998899999999986543222   2457888888887 799999999999999999999999


Q ss_pred             ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--CCC
Q 002105          762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--DSK  836 (966)
Q Consensus       762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--~~~  836 (966)
                      ||++|+|..++.   .++|.++..++.||+.||+|||   +.+||||||||+|||++.+  ..+|++|||++...  ...
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~--~~~Kl~DFG~a~~~~~~~~  170 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAPANS  170 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSSSBCC
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCC--CCEEEeecccccccCCCCc
Confidence            999999987764   4899999999999999999999   4589999999999999965  46799999998653  344


Q ss_pred             CcCCcccccccccCC---CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105          837 SINSSAYVAPETKES---KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS  913 (966)
Q Consensus       837 ~~~~~~y~aPE~~~~---~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  913 (966)
                      ..||+.|||||++.+   +.|+.++|||||||++|||+||+.||.+... .+.+..    ......     .+.....++
T Consensus       171 ~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~-~~~~~~----i~~~~~-----~~~~~~~~s  240 (309)
T d1u5ra_         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYH----IAQNES-----PALQSGHWS  240 (309)
T ss_dssp             CCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHH----HHHSCC-----CCCSCTTSC
T ss_pred             cccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH-HHHHHH----HHhCCC-----CCCCCCCCC
Confidence            679999999999854   4689999999999999999999999865321 111111    111110     011111222


Q ss_pred             chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          914 SIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                         +   ++.+++.+||+.||++|||++|+++
T Consensus       241 ---~---~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         241 ---E---YFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             ---H---HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---H---HHHHHHHHHCcCChhHCcCHHHHHh
Confidence               2   4667788999999999999999864


No 21 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=3.6e-43  Score=388.58  Aligned_cols=243  Identities=20%  Similarity=0.321  Sum_probs=195.4

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      +.....+|+||||.||+|+...+|..||||++........+.+.+|+..+.+ ++|||||++++++.+++..|+|||||+
T Consensus        28 Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSV-LRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHH-TCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            3445668999999999999988999999999866544445567888888877 699999999999999999999999999


Q ss_pred             CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105          765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS-----  835 (966)
Q Consensus       765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~-----  835 (966)
                      ||+|.+++.    .+++.....++.||+.||+|||   +.+||||||||+|||++.+....+|++|||++.....     
T Consensus       107 gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  183 (350)
T d1koaa2         107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  183 (350)
T ss_dssp             SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred             CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence            999999994    3899999999999999999999   4599999999999999866667799999999875432     


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ...||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ..+.. .-+...  ...    .++......+  
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~-~~i~~~--~~~----~~~~~~~~~s--  253 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-DDETL-RNVKSC--DWN----MDDSAFSGIS--  253 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHH-HHHHHT--CCC----SCCGGGGGCC--
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC-HHHHH-HHHHhC--CCC----CCcccccCCC--
Confidence            2468999999999999999999999999999999999999997542 12211 111110  100    1111111111  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                       +   ++.+++.+|++.||++|||++|+++
T Consensus       254 -~---~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         254 -E---DGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             -H---HHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -H---HHHHHHHHHccCChhHCcCHHHHhc
Confidence             2   4567788999999999999999876


No 22 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-43  Score=377.87  Aligned_cols=237  Identities=18%  Similarity=0.250  Sum_probs=189.1

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ++....+|+|+||.||+|+...+|+.||||++....   ....+.+.+|+..+.+ ++|||||++++++.+++..|+|||
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR-LDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH-CCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHH-cCCCCeeEEEEEEEECCEEEEEEE
Confidence            344556789999999999998899999999986432   2223457788877777 799999999999999999999999


Q ss_pred             ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105          762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----  834 (966)
Q Consensus       762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----  834 (966)
                      ||+||+|.++++   .+++.....++.|++.||+|||   +.+||||||||+|||+++++  .++++|||++....    
T Consensus        89 y~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~--~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          89 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTS--CEEECCCTTCEECC----
T ss_pred             ccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCc--eEEecccccceecccCCc
Confidence            999999999886   4899999999999999999999   55999999999999999664  57899999986431    


Q ss_pred             ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105          835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG  910 (966)
Q Consensus       835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  910 (966)
                          ...+||+.|||||++.+..|+.++||||+||++|||+||+.||.+..  ...+.+.+   .. ..      +.+..
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~~~~~~~i---~~-~~------~~~p~  231 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EYLIFQKI---IK-LE------YDFPE  231 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HT-TC------CCCCT
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC--HHHHHHHH---Hc-CC------CCCCc
Confidence                23469999999999999999999999999999999999999997542  11111111   11 11      11111


Q ss_pred             CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      ..+   +   ++.+++.+|++.||++|||++|+..
T Consensus       232 ~~s---~---~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         232 KFF---P---KARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             TCC---H---HHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             cCC---H---HHHHHHHHHccCCHhHCcCHHHHcC
Confidence            222   2   4567888999999999999999753


No 23 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-43  Score=372.34  Aligned_cols=237  Identities=22%  Similarity=0.323  Sum_probs=183.8

Q ss_pred             cccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec-CCeeEEEEEccCCC
Q 002105          688 LTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS-EKAAYLVYEYIEGK  766 (966)
Q Consensus       688 ~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~-~~~~~lv~Ey~~~g  766 (966)
                      ...+|+|+||.||+|+.  .|..||||++...  ...++|.+|++.+.+ ++|||||+++|+|.+ ++..|+||||+++|
T Consensus        12 ~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~--~~~~~~~~E~~~l~~-l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             EEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTT-CCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             eEEEecCCCeEEEEEEE--CCeEEEEEEECcH--HHHHHHHHHHHHHHh-CCCCCEeeEEEEEEecCCcEEEEEeccCCC
Confidence            34579999999999986  5789999998543  344678999988888 699999999999965 45689999999999


Q ss_pred             CHHHHHH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---CCCCc
Q 002105          767 ELSEVLR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---DSKSI  838 (966)
Q Consensus       767 ~L~~~l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---~~~~~  838 (966)
                      +|.++++     .++|..+++++.|||.||+|||   +.+||||||||+||+++.++  .++++|||.+...   .....
T Consensus        87 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~--~~kl~dfg~s~~~~~~~~~~~  161 (262)
T d1byga_          87 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQDTGK  161 (262)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTS--CEEECCCCC------------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCC--CEeecccccceecCCCCcccc
Confidence            9999985     2899999999999999999999   55899999999999999765  4688999988652   23346


Q ss_pred             CCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchHH
Q 002105          839 NSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQN  917 (966)
Q Consensus       839 ~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  917 (966)
                      +|+.|||||++.+..++.++|||||||++|||+| |+.|+...  ....+..++..    .     ..|.+....+    
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~--~~~~~~~~i~~----~-----~~~~~~~~~~----  226 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEK----G-----YKMDAPDGCP----  226 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTT----T-----CCCCCCTTCC----
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHc----C-----CCCCCCccCC----
Confidence            7889999999999999999999999999999999 67777643  22233333321    1     1111211222    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          918 EIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       918 ~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                        .++.+++.+||+.||++||||.||+++|++ ++
T Consensus       227 --~~~~~li~~cl~~dP~~Rps~~~l~~~L~~-i~  258 (262)
T d1byga_         227 --PAVYEVMKNCWHLDAAMRPSFLQLREQLEH-IK  258 (262)
T ss_dssp             --HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH-HH
T ss_pred             --HHHHHHHHHHcccCHhHCcCHHHHHHHHHH-HH
Confidence              256678889999999999999999999998 55


No 24 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-42  Score=375.20  Aligned_cols=242  Identities=22%  Similarity=0.321  Sum_probs=191.8

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc------cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI------TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV  759 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~------~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv  759 (966)
                      +....+|+|+||.||+|+...+|+.||||++......      ..+.+.+|+..+.+ ++|||||++++++.+++..|+|
T Consensus        13 ~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~iv   91 (293)
T d1jksa_          13 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE-IQHPNVITLHEVYENKTDVILI   91 (293)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHH-CCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEE
Confidence            3445679999999999999889999999998643221      12457788888877 6999999999999999999999


Q ss_pred             EEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC--ceEEEeccccceecC
Q 002105          760 YEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE--PHLRLSVPGLAYCTD  834 (966)
Q Consensus       760 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~--~~~~~~~~~~~~~~~  834 (966)
                      ||||++|+|.++++   .+++.....++.|++.||+|||   +.+||||||||+||+++.++.  ..++++|||++....
T Consensus        92 ~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~  168 (293)
T d1jksa_          92 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  168 (293)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred             EEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhhhcC
Confidence            99999999999996   4999999999999999999999   558999999999999986653  468999999986532


Q ss_pred             -----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccccc
Q 002105          835 -----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIR  909 (966)
Q Consensus       835 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  909 (966)
                           ....||+.|||||++.+..++.++|||||||++|||+||+.||.+.. ..+.. +.+.   .. ...  ..+...
T Consensus       169 ~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-~~~~~-~~i~---~~-~~~--~~~~~~  240 (293)
T d1jksa_         169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETL-ANVS---AV-NYE--FEDEYF  240 (293)
T ss_dssp             TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHH-HHHH---TT-CCC--CCHHHH
T ss_pred             CCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC-HHHHH-HHHH---hc-CCC--CCchhc
Confidence                 23478999999999999999999999999999999999999997542 11111 1111   11 000  111111


Q ss_pred             CCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          910 GHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       910 ~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      ...+      .++.+++.+||+.||++|||++|+++
T Consensus       241 ~~~s------~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         241 SNTS------ALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             TTSC------HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCC------HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1122      24567888999999999999999875


No 25 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=6.5e-43  Score=386.78  Aligned_cols=243  Identities=20%  Similarity=0.292  Sum_probs=195.4

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccC
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      ++.+..+|+|+||.||+|+...+|..||||++........+.+.+|+..+.+ ++|||||++++++.+++..|+|||||+
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ-LHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTT-CCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHh-CCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            4555678999999999999988999999999876544445567788887777 799999999999999999999999999


Q ss_pred             CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105          765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS-----  835 (966)
Q Consensus       765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~-----  835 (966)
                      ||+|.+++.    .+++.+...++.||+.||+|||   +.+||||||||+|||++......++++|||++.....     
T Consensus       110 gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~  186 (352)
T d1koba_         110 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK  186 (352)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred             CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCCcee
Confidence            999998874    3899999999999999999999   4599999999999999876667899999999876432     


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ...||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ..+.. ..+...  ...    ..+......+  
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~-~~i~~~--~~~----~~~~~~~~~s--  256 (352)
T d1koba_         187 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-DLETL-QNVKRC--DWE----FDEDAFSSVS--  256 (352)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHH-HHHHHC--CCC----CCSSTTTTSC--
T ss_pred             eccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-HHHHH-HHHHhC--CCC----CCcccccCCC--
Confidence            2368999999999999999999999999999999999999997542 11111 111110  000    1111111122  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                       +   ++.+++.+|++.||++|||++|+++
T Consensus       257 -~---~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         257 -P---EAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             -H---HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -H---HHHHHHHHHccCChhHCcCHHHHhc
Confidence             2   4567888999999999999999975


No 26 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-42  Score=378.32  Aligned_cols=243  Identities=19%  Similarity=0.278  Sum_probs=189.5

Q ss_pred             ccCCCCCccEEEEEEEecCCc--EEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          689 TSRGKKGVSSSYKVRSLANDM--QFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       689 ~~~g~~g~~~vy~~~~~~~~~--~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      ..+|+|+||.||+|+...+|.  .||||++... .....++|.+|+..+.++.+|||||+++|+|.+++..|+||||+++
T Consensus        16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~   95 (309)
T d1fvra_          16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   95 (309)
T ss_dssp             EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCC
Confidence            457999999999999977776  4778887543 3334567899999998844899999999999999999999999999


Q ss_pred             CCHHHHHH-------------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEec
Q 002105          766 KELSEVLR-------------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSV  826 (966)
Q Consensus       766 g~L~~~l~-------------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~  826 (966)
                      |+|.++|+                   .++|..+.+++.|||+||+|+|   +.+||||||||+|||++.+.  .+|++|
T Consensus        96 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~--~~kl~D  170 (309)
T d1fvra_          96 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY--VAKIAD  170 (309)
T ss_dssp             CBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG--CEEECC
T ss_pred             CcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCC--ceEEcc
Confidence            99999985                   3799999999999999999999   55999999999999999654  578999


Q ss_pred             cccceec-----CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHHHHhhccCcc
Q 002105          827 PGLAYCT-----DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKS-PADADFGVHESIVEWARYCYSDCHL  900 (966)
Q Consensus       827 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~  900 (966)
                      ||++...     .....||+.|+|||.+.+..|+.++|||||||++|||+||.. ||.+. . ...+.+.+   ..+.  
T Consensus       171 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~-~~~~~~~i---~~~~--  243 (309)
T d1fvra_         171 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-T-CAELYEKL---PQGY--  243 (309)
T ss_dssp             TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-C-HHHHHHHG---GGTC--
T ss_pred             ccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-C-HHHHHHHH---HhcC--
Confidence            9998542     223468899999999999999999999999999999999765 55432 1 22222222   1111  


Q ss_pred             cccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105          901 DTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI  953 (966)
Q Consensus       901 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~  953 (966)
                          .+......+      .++.+++.+||+.||++||||+||++.|+++++.
T Consensus       244 ----~~~~~~~~~------~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         244 ----RLEKPLNCD------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             ----CCCCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ----CCCCCccCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                111111222      2566788899999999999999999999996654


No 27 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=9e-43  Score=379.21  Aligned_cols=241  Identities=21%  Similarity=0.354  Sum_probs=191.3

Q ss_pred             cccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEE
Q 002105          686 ENLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLV  759 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv  759 (966)
                      +.+..+|+||||.||+|+..     .++..||||++..... ...++|.+|+..+.+ ++|||||+++++|..++..++|
T Consensus        16 ~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~v   94 (301)
T d1lufa_          16 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE-FDNPNIVKLLGVCAVGKPMCLL   94 (301)
T ss_dssp             EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEECSSSSCEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHh-cCCCCcccceeeeccCCceEEE
Confidence            45566899999999999974     2457899998864332 234568999988888 6999999999999999999999


Q ss_pred             EEccCCCCHHHHHHc---------------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcE
Q 002105          760 YEYIEGKELSEVLRN---------------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKV  812 (966)
Q Consensus       760 ~Ey~~~g~L~~~l~~---------------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Ni  812 (966)
                      |||+++|+|.++++.                           ++|..+..|+.|+|.||+|||   +.+||||||||+||
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivHrDlKp~NI  171 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNC  171 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEeeEEcccce
Confidence            999999999999852                           789999999999999999999   55899999999999


Q ss_pred             EEcCCCCceEEEeccccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCC-CCCCCCCc
Q 002105          813 IVDGKDEPHLRLSVPGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKS-PADADFGV  883 (966)
Q Consensus       813 ll~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~-p~~~~~~~  883 (966)
                      |+|.++  .+|++|||++...        .+...+|+.|||||.+.+..||.|+|||||||++|||+||.. ||... ..
T Consensus       172 Lld~~~--~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~-~~  248 (301)
T d1lufa_         172 LVGENM--VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AH  248 (301)
T ss_dssp             EECGGG--CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CH
T ss_pred             EECCCC--cEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC-CH
Confidence            999754  5799999997532        123467889999999999999999999999999999999964 55432 22


Q ss_pred             hhhHHHHHHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105          884 HESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES  949 (966)
Q Consensus       884 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~  949 (966)
                      .+ +...+.   . ...     |.+....+      .++.+++.+||+.||++||||.||+++|++
T Consensus       249 ~e-~~~~v~---~-~~~-----~~~p~~~~------~~~~~li~~cl~~~P~~RPt~~ev~~~L~~  298 (301)
T d1lufa_         249 EE-VIYYVR---D-GNI-----LACPENCP------LELYNLMRLCWSKLPADRPSFCSIHRILQR  298 (301)
T ss_dssp             HH-HHHHHH---T-TCC-----CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH-HHHHHH---c-CCC-----CCCCccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            22 222222   1 111     11111222      256778899999999999999999999998


No 28 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-42  Score=377.19  Aligned_cols=241  Identities=22%  Similarity=0.381  Sum_probs=187.6

Q ss_pred             cCCCCCccEEEEEEEecCC---cEEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEec-CCeeEEEEEccC
Q 002105          690 SRGKKGVSSSYKVRSLAND---MQFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS-EKAAYLVYEYIE  764 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~~~---~~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~-~~~~~lv~Ey~~  764 (966)
                      .+|+|+||.||+|+...++   ..||||++... .....++|.+|+..+.+ ++|||||+++|+|.+ ++..++|||||+
T Consensus        34 ~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~~~g~~~~~~~~~~lv~E~~~  112 (311)
T d1r0pa_          34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-FSHPNVLSLLGICLRSEGSPLVVLPYMK  112 (311)
T ss_dssp             EEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHT-CCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred             EEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh-CCCCCEeEEeEEEEecCCceEEEEEEee
Confidence            3699999999999985543   36899998643 33334678999998888 699999999999875 568999999999


Q ss_pred             CCCHHHHHHc----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105          765 GKELSEVLRN----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------  834 (966)
Q Consensus       765 ~g~L~~~l~~----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------  834 (966)
                      +|+|.++++.    .+|..+.+++.|+|+||.|+|   +++|+||||||+|||+|++.  .++++|||++....      
T Consensus       113 ~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~--~~kL~DFG~~~~~~~~~~~~  187 (311)
T d1r0pa_         113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDS  187 (311)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTC--CEEECSSGGGCCTTTTTCCC
T ss_pred             cCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCC--CEEEecccchhhcccccccc
Confidence            9999999873    678899999999999999999   56899999999999999765  46889999986421      


Q ss_pred             ----CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105          835 ----SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG  910 (966)
Q Consensus       835 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  910 (966)
                          ....||+.|+|||.+.+..++.|+|||||||++|||+||+.|+.......+.. .++   ..+...   ..|   .
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~-~~i---~~g~~~---~~p---~  257 (311)
T d1r0pa_         188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYL---LQGRRL---LQP---E  257 (311)
T ss_dssp             TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CH-HHH---HTTCCC---CCC---T
T ss_pred             ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHH-HHH---HcCCCC---CCc---c
Confidence                12357889999999999999999999999999999999888876543222211 222   121111   111   1


Q ss_pred             CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      ..+      .++.+++.+||+.||++||+|.||++.|+++..
T Consensus       258 ~~~------~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         258 YCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCc------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            222      256678899999999999999999999999544


No 29 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-42  Score=375.22  Aligned_cols=249  Identities=20%  Similarity=0.280  Sum_probs=184.6

Q ss_pred             cCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHH--HHHHHhhcCCCceeEEeeEEecCC----eeEEEEEcc
Q 002105          690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPD--VSQFGKLIMHPNIVRLHGVCRSEK----AAYLVYEYI  763 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e--~~~~~~~~~H~niv~l~g~~~~~~----~~~lv~Ey~  763 (966)
                      .+|+||||.||+|+.  +|..||||++....   .+++..|  +..+.+ ++|||||+++|+|.+++    .+|+|||||
T Consensus        10 ~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~-~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_          10 SIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVM-LRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEECCSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTT-CCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhHHHHHHHHHHHhh-CCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            468999999999985  78899999885332   2233333  333444 69999999999998654    589999999


Q ss_pred             CCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---
Q 002105          764 EGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFH-----CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---  833 (966)
Q Consensus       764 ~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---  833 (966)
                      ++|+|.++++  .++|..+.+++.|+|.||+|+|+.     ..++||||||||+|||+|.++  .+|++|||++...   
T Consensus        84 ~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~--~~Kl~DFGl~~~~~~~  161 (303)
T d1vjya_          84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSA  161 (303)
T ss_dssp             TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTS--CEEECCCTTCEEEETT
T ss_pred             cCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCC--CeEEEecCccccccCC
Confidence            9999999998  589999999999999999999963     257999999999999999765  5789999987542   


Q ss_pred             -------CCCCcCCcccccccccCCCC------CCCcchHHHHHHHHHHHHcCCCCCCCCCCc----------hhhHHHH
Q 002105          834 -------DSKSINSSAYVAPETKESKD------ITEKGDIYGFGLILIDLLTGKSPADADFGV----------HESIVEW  890 (966)
Q Consensus       834 -------~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~----------~~~~~~~  890 (966)
                             .....||+.|||||++.+..      ++.|+|||||||++|||+||..|+......          .... +.
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~-~~  240 (303)
T d1vjya_         162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV-EE  240 (303)
T ss_dssp             TTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH-HH
T ss_pred             CcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH-HH
Confidence                   12346899999999987542      677999999999999999999886432110          0011 12


Q ss_pred             HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      .+.......    .+|.+..... ..+...++.+++.+||+.||++||||.||+++|+++.+
T Consensus       241 ~~~~~~~~~----~~p~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         241 MRKVVCEQK----LRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHTTSC----CCCCCCGGGG-GCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhccc----cCCCCCcccC-ChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            222111111    2222221111 12345568889999999999999999999999998443


No 30 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-42  Score=375.17  Aligned_cols=246  Identities=19%  Similarity=0.279  Sum_probs=184.6

Q ss_pred             cccccCCCCCccEEEEEEEec-----CCcEEEEEEEeccC-cccccchHHHHHHHHhhcCCCceeEEeeEEecC-CeeEE
Q 002105          686 ENLTSRGKKGVSSSYKVRSLA-----NDMQFVVKKIIDVN-TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-KAAYL  758 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~-----~~~~vavk~~~~~~-~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-~~~~l  758 (966)
                      .....+|+|+||.||+|+...     +++.||||++.... ....+.+..|+..+.++.+|||||++++++.++ +..++
T Consensus        16 ~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~i   95 (299)
T d1ywna1          16 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV   95 (299)
T ss_dssp             EEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEE
T ss_pred             EEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEE
Confidence            344567999999999999754     34689999886432 233456888888888877899999999998765 46899


Q ss_pred             EEEccCCCCHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC
Q 002105          759 VYEYIEGKELSEVLRN-------------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE  819 (966)
Q Consensus       759 v~Ey~~~g~L~~~l~~-------------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~  819 (966)
                      |||||++|+|.++++.                   ++|.++..++.|||+||+|||   +.+||||||||+|||++++. 
T Consensus        96 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~~~~-  171 (299)
T d1ywna1          96 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKN-  171 (299)
T ss_dssp             EEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGG-
T ss_pred             EEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeECCCC-
Confidence            9999999999999852                   789999999999999999999   45899999999999998654 


Q ss_pred             ceEEEeccccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCC-CCCCCCCCchhhHHHH
Q 002105          820 PHLRLSVPGLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGK-SPADADFGVHESIVEW  890 (966)
Q Consensus       820 ~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~-~p~~~~~~~~~~~~~~  890 (966)
                       .+|++|||++...        .....||+.|||||++.+..++.++|||||||++|||+||. +||.+... .+.+...
T Consensus       172 -~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~-~~~~~~~  249 (299)
T d1ywna1         172 -VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRR  249 (299)
T ss_dssp             -CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHHHHHH
T ss_pred             -cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-HHHHHHH
Confidence             5799999998542        12346899999999999999999999999999999999975 56654322 2222222


Q ss_pred             HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      +..   +.      .+.+....+      .++.+++.+||+.||++||||+||++.|+++++
T Consensus       250 ~~~---~~------~~~~~~~~~------~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         250 LKE---GT------RMRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HHH---TC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             Hhc---CC------CCCCCccCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            221   11      111111222      256778899999999999999999999998554


No 31 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6e-42  Score=377.02  Aligned_cols=237  Identities=21%  Similarity=0.298  Sum_probs=185.7

Q ss_pred             CCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec----CCeeEEEEEccCCC
Q 002105          691 RGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS----EKAAYLVYEYIEGK  766 (966)
Q Consensus       691 ~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~----~~~~~lv~Ey~~~g  766 (966)
                      +|+|+||.||+|++..+++.||||++..     ...+.+|+..+.+..+|||||+++++|.+    ++.+|+|||||+||
T Consensus        20 lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg   94 (335)
T d2ozaa1          20 LGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG   94 (335)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCC
Confidence            7999999999999989999999999853     24567788877776789999999999865    46789999999999


Q ss_pred             CHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCC-CceEEEeccccceecC-----C
Q 002105          767 ELSEVLRN-----LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKD-EPHLRLSVPGLAYCTD-----S  835 (966)
Q Consensus       767 ~L~~~l~~-----l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~-~~~~~~~~~~~~~~~~-----~  835 (966)
                      +|.++++.     +++.+...++.||+.||+|||   +.+|+||||||+|||++.+. ...+|++|||++....     .
T Consensus        95 ~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~  171 (335)
T d2ozaa1          95 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT  171 (335)
T ss_dssp             EHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCC
T ss_pred             cHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccccccccccccccccccccceeeeccCCCccc
Confidence            99999963     789999999999999999999   55999999999999998644 4578999999986532     3


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ...||+.|||||++.+..|+.++||||+||++|||+||+.||.+.... ... ............ .+..+       ..
T Consensus       172 ~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~-~~~-~~~~~~i~~~~~-~~~~~-------~~  241 (335)
T d2ozaa1         172 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AIS-PGMKTRIRMGQY-EFPNP-------EW  241 (335)
T ss_dssp             CCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCSCSS-SCCTT-------HH
T ss_pred             cccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH-HHH-HHHHHHHhcCCC-CCCCc-------cc
Confidence            457999999999999999999999999999999999999999754221 111 111110100000 00000       00


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      .....++.+++.+|++.||++|||+.|+++
T Consensus       242 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         242 SEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            111235677889999999999999999976


No 32 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-42  Score=372.33  Aligned_cols=244  Identities=20%  Similarity=0.305  Sum_probs=188.3

Q ss_pred             ccccCCCCCccEEEEEEEecCC-------cEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105          687 NLTSRGKKGVSSSYKVRSLAND-------MQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL  758 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~~~~-------~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l  758 (966)
                      ....+|+||||.||+|+....+       ..||||++..... ....++.+|+..+.++.+|||||+++|+|.+++..++
T Consensus        17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~   96 (299)
T d1fgka_          17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV   96 (299)
T ss_dssp             EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEE
Confidence            3456799999999999976544       4789998854322 3345688888888886689999999999999999999


Q ss_pred             EEEccCCCCHHHHHH-------------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC
Q 002105          759 VYEYIEGKELSEVLR-------------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE  819 (966)
Q Consensus       759 v~Ey~~~g~L~~~l~-------------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~  819 (966)
                      |||||++|+|.++++                   .++|.++.+++.|||.||+|||   +.+||||||||+|||++.++.
T Consensus        97 v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl~~~~~  173 (299)
T d1fgka_          97 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNV  173 (299)
T ss_dssp             EECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCC
T ss_pred             EEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceeecCCCC
Confidence            999999999999994                   3799999999999999999999   558999999999999997654


Q ss_pred             ceEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHH
Q 002105          820 PHLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEW  890 (966)
Q Consensus       820 ~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  890 (966)
                        +|++|||++....        ....+|+.|||||.+.++.|+.|+|||||||++|||+| |++||....  ...+.++
T Consensus       174 --~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~--~~~~~~~  249 (299)
T d1fgka_         174 --MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--VEELFKL  249 (299)
T ss_dssp             --EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHH
T ss_pred             --eEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC--HHHHHHH
Confidence              6889999876421        22467889999999999999999999999999999998 687876431  2222232


Q ss_pred             HHHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          891 ARYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       891 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      +..   +.      .+......+      .++.+++.+||+.||++||||+||+++|++++.
T Consensus       250 i~~---~~------~~~~p~~~~------~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         250 LKE---GH------RMDKPSNCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHT---TC------CCCCCSSCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHc---CC------CCCCCccch------HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            221   11      111112222      256778899999999999999999999998654


No 33 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-42  Score=374.34  Aligned_cols=245  Identities=19%  Similarity=0.275  Sum_probs=193.2

Q ss_pred             cccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          688 LTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       688 ~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ...+|+|+||.||+|+..     .+++.||||++..... ....+|.+|+..+.++.+|||||+++|+|.+++..++|||
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE  107 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE  107 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEE
Confidence            445799999999999863     3557899999865432 3344688899888885579999999999999999999999


Q ss_pred             ccCCCCHHHHHH---------------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCc
Q 002105          762 YIEGKELSEVLR---------------------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEP  820 (966)
Q Consensus       762 y~~~g~L~~~l~---------------------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~  820 (966)
                      ||++|+|.++++                     .++|..+.+++.|||+||+|||   +.+||||||||+||+++.+  .
T Consensus       108 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~~~--~  182 (311)
T d1t46a_         108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHG--R  182 (311)
T ss_dssp             CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETT--T
T ss_pred             cCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccccccccccc--C
Confidence            999999999986                     2789999999999999999999   5589999999999999865  4


Q ss_pred             eEEEeccccceecC--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcC-CCCCCCCCCchhhHHHHH
Q 002105          821 HLRLSVPGLAYCTD--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTG-KSPADADFGVHESIVEWA  891 (966)
Q Consensus       821 ~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~  891 (966)
                      .++++|||.+....        ....||+.|||||++.+..++.++|||||||++|||+|+ ++|+... ...+.+.+.+
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~-~~~~~~~~~i  261 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMI  261 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CSSHHHHHHH
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC-CHHHHHHHHH
Confidence            57899999886422        234678999999999999999999999999999999995 5545433 2233332333


Q ss_pred             HHhhccCcccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcc
Q 002105          892 RYCYSDCHLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRI  953 (966)
Q Consensus       892 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~  953 (966)
                      ....         .+......+      .++.+++.+||+.||++||||+||+++|++.+..
T Consensus       262 ~~~~---------~~~~~~~~~------~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         262 KEGF---------RMLSPEHAP------AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHTC---------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcCC---------CCCCccccc------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            2211         111111222      2567788999999999999999999999986554


No 34 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=5.9e-42  Score=368.39  Aligned_cols=244  Identities=21%  Similarity=0.340  Sum_probs=184.5

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc---cccchHHHHHHHHhhcCCCceeEEeeEEecCC----eeEE
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI---TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK----AAYL  758 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~---~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~----~~~l  758 (966)
                      .....+|+|+||.||+|++..+|+.||||++......   ..+.|.+|+..+.+ ++|||||++++++..++    ..|+
T Consensus        10 ~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~-~~hpniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_          10 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA-LNHPAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHh-cCCCCCCcccceeeeccCCCceEEE
Confidence            3445679999999999999899999999998643222   23357888888877 79999999999997654    4899


Q ss_pred             EEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec--
Q 002105          759 VYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT--  833 (966)
Q Consensus       759 v~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~--  833 (966)
                      |||||+||+|.+++.   .++|.+...++.||+.||+|||   +.+||||||||+|||++.+..  .++.+||.+...  
T Consensus        89 vmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~--~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          89 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNA--VKVMDFGIARAIAD  163 (277)
T ss_dssp             EEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSC--EEECCCTTCEECC-
T ss_pred             EEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCcccc--ceeehhhhhhhhcc
Confidence            999999999999886   4899999999999999999999   559999999999999987654  567777765431  


Q ss_pred             -------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccc
Q 002105          834 -------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDP  906 (966)
Q Consensus       834 -------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  906 (966)
                             ....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+... .+.....    ......   ...
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~~----~~~~~~---~~~  235 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-VSVAYQH----VREDPI---PPS  235 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHH----HHCCCC---CGG
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH-HHHHHHH----HhcCCC---CCc
Confidence                   2234689999999999999999999999999999999999999975421 1211111    111110   000


Q ss_pred             cccCCCcchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHHH
Q 002105          907 FIRGHVSSIQNEIVEIMNLALHCTAGDPTARP-CASDVTKTLES  949 (966)
Q Consensus       907 ~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RP-t~~~v~~~L~~  949 (966)
                      ......+   +   ++.+++.+|++.||++|| |++++...|.+
T Consensus       236 ~~~~~~s---~---~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         236 ARHEGLS---A---DLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GTSSSCC---H---HHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             hhccCCC---H---HHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            0111122   2   456677899999999999 89999999987


No 35 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-42  Score=375.96  Aligned_cols=246  Identities=17%  Similarity=0.263  Sum_probs=188.9

Q ss_pred             ccccccccCCCCCccEEEEEEEecCCc----EEEEEEEecc-CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105          683 TTEENLTSRGKKGVSSSYKVRSLANDM----QFVVKKIIDV-NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY  757 (966)
Q Consensus       683 ~~~~~~~~~g~~g~~~vy~~~~~~~~~----~vavk~~~~~-~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~  757 (966)
                      ++++.+..+|+|+||.||+|+...+|+    .||+|++... .....++|.+|+..+.+ ++|||||+++|+|.++ ..+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~~-~~~   86 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTS-TVQ   86 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHH-CCCTTBCCEEEEEESS-SEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEecC-Cee
Confidence            345566778999999999999877775    5788887543 23344568899988888 6999999999999875 567


Q ss_pred             EEEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105          758 LVYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT  833 (966)
Q Consensus       758 lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~  833 (966)
                      +||||+.+|+|.+++.    .++|..+.+++.|||+||+|||.   .+||||||||+|||++.+.  .+|++|||++...
T Consensus        87 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~--~~kl~DFGla~~~  161 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLL  161 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETT--EEEECCCSHHHHT
T ss_pred             EEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCC--CeEeeccccceec
Confidence            8899999999998875    38999999999999999999994   5899999999999999654  6789999998642


Q ss_pred             C--------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccc
Q 002105          834 D--------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWV  904 (966)
Q Consensus       834 ~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  904 (966)
                      .        ....||+.|||||++.++.|+.++|||||||++|||+| |+.||++..  ...+.+.+..   +..     
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~--~~~~~~~i~~---~~~-----  231 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEK---GER-----  231 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--GGGHHHHHHH---TCC-----
T ss_pred             ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHc---CCC-----
Confidence            1        22357899999999999999999999999999999999 788886532  2222222221   111     


Q ss_pred             cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                       +......+      .++.+++.+||+.||++||||+||++.|+.+.+
T Consensus       232 -~~~p~~~~------~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         232 -LPQPPICT------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             -CCCCTTBC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CCCCcccC------HHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence             11111222      356778899999999999999999999988544


No 36 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=2.5e-41  Score=368.83  Aligned_cols=237  Identities=20%  Similarity=0.328  Sum_probs=188.9

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ++.+..+|+|+||.||+|+...+|+.||||++....   ....+.+.+|+..+.+ ++|||||++++++.+++..|+|||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~ivmE   84 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-VTHPFIIRMWGTFQDAQQIFMIMD   84 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHh-ccCcChhheeeeEeeCCeeeeEee
Confidence            344566799999999999998899999999986431   2223456777777766 799999999999999999999999


Q ss_pred             ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec---CC
Q 002105          762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT---DS  835 (966)
Q Consensus       762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~---~~  835 (966)
                      ||+||+|..++.   .+++.....++.||+.||+|||   +.+||||||||+|||++.++  .+|++|||++...   ..
T Consensus        85 ~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g--~vkL~DFG~a~~~~~~~~  159 (316)
T d1fota_          85 YIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNG--HIKITDFGFAKYVPDVTY  159 (316)
T ss_dssp             CCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTS--CEEECCCSSCEECSSCBC
T ss_pred             ecCCccccccccccccccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCC--CEEEecCccceEeccccc
Confidence            999999999886   3788888999999999999999   66999999999999999654  5899999998753   23


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ..+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ..+.. ..+   ... .      +.+....+  
T Consensus       160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-~~~~~-~~i---~~~-~------~~~p~~~s--  225 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-TMKTY-EKI---LNA-E------LRFPPFFN--  225 (316)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-HHHHH-HHH---HHC-C------CCCCTTSC--
T ss_pred             cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC-HHHHH-HHH---HcC-C------CCCCCCCC--
Confidence            4679999999999999999999999999999999999999997542 11111 111   111 0      11111122  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARP-----CASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~~  945 (966)
                       +   ++.+++.+|++.||.+||     |++|+++
T Consensus       226 -~---~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         226 -E---DVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             -H---HHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -H---HHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence             2   456777899999999996     8888863


No 37 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.7e-42  Score=365.42  Aligned_cols=242  Identities=19%  Similarity=0.251  Sum_probs=181.8

Q ss_pred             ccccccCCCCCccEEEEEEEecC-C--cEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLAN-D--MQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYL  758 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~-~--~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~l  758 (966)
                      .+.+..+|+||||.||+|+...+ +  ..||||++....   ....++|.+|+..+.+ ++|||||+++|+|.+ +..++
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~-l~H~nIv~~~g~~~~-~~~~l   87 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS-LDHRNLIRLYGVVLT-PPMKM   87 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHH-CCCTTBCCEEEEECS-SSCEE
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEee-cchhe
Confidence            44566789999999999986533 2  368999875432   2223568899988888 699999999999976 46789


Q ss_pred             EEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105          759 VYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD  834 (966)
Q Consensus       759 v~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~  834 (966)
                      |||||++|++.+++.    .++|..+.+++.|||+||+|||   +.+|+||||||+||+++.+.  .+|++|||++....
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~--~vkl~DfGl~~~~~  162 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRD--LVKIGDFGLMRALP  162 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETT--EEEECCCTTCEECC
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhcccccc--ceeeccchhhhhcc
Confidence            999999999998874    4999999999999999999999   45899999999999999754  68999999987532


Q ss_pred             ---------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccc
Q 002105          835 ---------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWV  904 (966)
Q Consensus       835 ---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  904 (966)
                               ....+++.|||||.+.+..++.++|||||||++|||+| |+.||.+. ...+ +..++.   ...     .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~-~~~~-~~~~i~---~~~-----~  232 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ-ILHKID---KEG-----E  232 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHH-HHHHHH---TSC-----C
T ss_pred             cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc-CHHH-HHHHHH---hCC-----C
Confidence                     12346789999999999999999999999999999998 89998753 1122 222222   111     1


Q ss_pred             cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHH
Q 002105          905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLES  949 (966)
Q Consensus       905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~  949 (966)
                      .+......+      .++.+++.+||+.||++||||.||.+.|++
T Consensus       233 ~~~~~~~~~------~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         233 RLPRPEDCP------QDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCccccc------HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            111111222      256678899999999999999999999987


No 38 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-41  Score=368.63  Aligned_cols=237  Identities=23%  Similarity=0.287  Sum_probs=189.9

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ++.+..+|+|+||.||+|+...+|+.||||++....   ....+.+.+|+..+.+ ++|||||++++++.+++..|+|||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~-l~hp~Iv~l~~~~~~~~~~~iv~e   85 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHS-CCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHh-CCCCCEEEEEeeecccccccccee
Confidence            445667899999999999999999999999986432   2233457788887777 799999999999999999999999


Q ss_pred             ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105          762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----  834 (966)
Q Consensus       762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----  834 (966)
                      ||+||+|.++++   .+++...+.++.||+.||+|||   +.+||||||||+|||+|.++  .+|++|||++....    
T Consensus        86 y~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g--~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          86 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             CCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCCTTC
T ss_pred             ccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCC--CEEEeecccccccccCCc
Confidence            999999999986   3888899999999999999999   55999999999999999764  68999999986421    


Q ss_pred             --CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105          835 --SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV  912 (966)
Q Consensus       835 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  912 (966)
                        ...+||+.|||||++.+..|+.++||||+||++|||+||+.||.+..  ...+.+....   . .      +.++...
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~--~~~~~~~i~~---~-~------~~~p~~~  228 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HERLFELILM---E-E------IRFPRTL  228 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH---C-C------CCCCTTS
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcC--HHHHHHHHhc---C-C------CCCCccC
Confidence              23578999999999999999999999999999999999999997642  2222121111   1 1      1111122


Q ss_pred             cchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002105          913 SSIQNEIVEIMNLALHCTAGDPTARPC-----ASDVTK  945 (966)
Q Consensus       913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~~v~~  945 (966)
                      +   +   ++.+++..|++.||++||+     +.|+++
T Consensus       229 s---~---~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         229 S---P---EAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             C---H---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             C---H---HHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            2   2   4567788999999999995     666654


No 39 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-41  Score=370.20  Aligned_cols=236  Identities=19%  Similarity=0.310  Sum_probs=189.3

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY  762 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey  762 (966)
                      +....+|+|+||.||+|+...+|+.||||++....   ....+.+..|+..+.+.++|||||++++++.+++..|+||||
T Consensus         5 ~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy   84 (320)
T d1xjda_           5 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEY   84 (320)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEee
Confidence            33456789999999999998999999999986432   223345677887777668999999999999999999999999


Q ss_pred             cCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec------
Q 002105          763 IEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT------  833 (966)
Q Consensus       763 ~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~------  833 (966)
                      |++|+|.++++   .+++.+...++.||+.||+|||   +.+||||||||+|||+++++  .++++|||++...      
T Consensus        85 ~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~--~~kl~DFG~a~~~~~~~~~  159 (320)
T d1xjda_          85 LNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAK  159 (320)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTCC
T ss_pred             cCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCC--ceeccccchhhhccccccc
Confidence            99999999996   4889999999999999999999   45899999999999999654  5789999998642      


Q ss_pred             CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCc
Q 002105          834 DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVS  913 (966)
Q Consensus       834 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  913 (966)
                      .....||+.|||||++.+..|+.++||||+||++|||+||+.||.+..  ...+...+..          -.|......+
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~----------~~~~~p~~~s  227 (320)
T d1xjda_         160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIRM----------DNPFYPRWLE  227 (320)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH----------CCCCCCTTSC
T ss_pred             ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC--HHHHHHHHHc----------CCCCCCccCC
Confidence            233578999999999999999999999999999999999999997642  2222121111          1111112222


Q ss_pred             chHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002105          914 SIQNEIVEIMNLALHCTAGDPTARPCAS-DVT  944 (966)
Q Consensus       914 ~~~~~~~~~~~l~~~C~~~~P~~RPt~~-~v~  944 (966)
                         +   ++.+++.+|++.||++|||+. |+.
T Consensus       228 ---~---~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         228 ---K---EAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             ---H---HHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             ---H---HHHHHHHHhcccCCCCCcCHHHHHH
Confidence               2   456778899999999999995 674


No 40 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-41  Score=370.13  Aligned_cols=241  Identities=19%  Similarity=0.260  Sum_probs=192.2

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEG  765 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~  765 (966)
                      .....+|+|+||.||+|++..+|..||||.+... ......+.+|+..+.+ ++|||||++++++.+++..|+|||||+|
T Consensus         8 ~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~-~~~~~~~~~Ei~il~~-l~HpnIv~~~~~~~~~~~~~lvmE~~~g   85 (321)
T d1tkia_           8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNI-ARHRNILHLHESFESMEELVMIFEFISG   85 (321)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHH-SCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred             EEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCC-cccHHHHHHHHHHHHh-CCCCCCCeEEEEEEECCEEEEEEecCCC
Confidence            3445679999999999999889999999988543 2233457788877766 7999999999999999999999999999


Q ss_pred             CCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----C
Q 002105          766 KELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS-----K  836 (966)
Q Consensus       766 g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~-----~  836 (966)
                      |+|.++++    .+++.+...++.||++||+|||   +.+|+||||||+|||++.+....++++|||++.....     .
T Consensus        86 g~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~  162 (321)
T d1tkia_          86 LDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL  162 (321)
T ss_dssp             CBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccc
Confidence            99999996    3789999999999999999999   4599999999999999987777899999999875432     2


Q ss_pred             CcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcchH
Q 002105          837 SINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSIQ  916 (966)
Q Consensus       837 ~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  916 (966)
                      ..+|+.|+|||...+..|+.++||||+||++|||+||+.||..... .+.. ..+.   .. .. . .+.......+   
T Consensus       163 ~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~-~~~~-~~i~---~~-~~-~-~~~~~~~~~s---  231 (321)
T d1tkia_         163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQII-ENIM---NA-EY-T-FDEEAFKEIS---  231 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHH-HHHH---HT-CC-C-CCHHHHTTSC---
T ss_pred             cccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH-HHHH-HHHH---hC-CC-C-CChhhccCCC---
Confidence            3689999999999999999999999999999999999999976421 1111 1111   11 00 0 1111111111   


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          917 NEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       917 ~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                         .++.+++.+|++.||++|||++|+++
T Consensus       232 ---~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         232 ---IEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             ---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence               24567888999999999999999986


No 41 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00  E-value=3.2e-41  Score=370.23  Aligned_cols=289  Identities=31%  Similarity=0.530  Sum_probs=233.7

Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCC--cccceeeCCCC---CEEEEEcCCCCccc--cccccccCCCCCCEE
Q 002105           18 CHGAELELLLSFKSTVNDPYNFLSNWDSSVTFC--KWNGISCQNST---HVNAIELSAKNISG--KISSSIFHLPHVESI   90 (966)
Q Consensus        18 ~~~~~~~~Ll~~k~~~~~~~~~l~~w~~~~~~c--~w~gv~c~~~~---~v~~L~L~~~~l~~--~~~~~~~~l~~L~~L   90 (966)
                      |+++|++||++||+++.||. .+++|..++|||  .|+||+|++.+   ||+.|||++++++|  .+|+++++|++|++|
T Consensus         3 c~~~e~~aLl~~k~~~~~~~-~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L   81 (313)
T d1ogqa_           3 CNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL   81 (313)
T ss_dssp             SCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred             CCHHHHHHHHHHHHHCCCCC-cCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccccc
Confidence            99999999999999999875 689998778999  49999998754   89999999999998  578999999999999


Q ss_pred             EcCC-CCCccccChhhhhcCCCCcEEECCCCCCCCCCC--CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCC
Q 002105           91 NLSS-NQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNV  167 (966)
Q Consensus        91 ~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~  167 (966)
                      ||++ |+++|.||+++.. +++|++|+|++|++.+..+  +..+.+|+++++++|.+.+.+|..++++++|+++++++|.
T Consensus        82 ~Ls~~N~l~g~iP~~i~~-L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~  160 (313)
T d1ogqa_          82 YIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR  160 (313)
T ss_dssp             EEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred             cccccccccccccccccc-ccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeeccccc
Confidence            9996 8999999987654 5889999999888887444  4677788888888888888888888888888888888888


Q ss_pred             CcccCCcCCCCCCCC-CEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCc
Q 002105          168 LVGEIPLSISNITSL-QIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPP  246 (966)
Q Consensus       168 l~~~~p~~~~~l~~L-~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~  246 (966)
                      +.+.+|..+..+..+ +.++++.|++++..|..+..+..+ .+++..+...+.+|..+..+++|+.+++++|.+.+.+| 
T Consensus       161 l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-  238 (313)
T d1ogqa_         161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-  238 (313)
T ss_dssp             CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-
T ss_pred             cccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc-
Confidence            888888877777765 777888888887777777766544 57777777777777777777778888888777776544 


Q ss_pred             CCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCC
Q 002105          247 SFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNN  311 (966)
Q Consensus       247 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~  311 (966)
                      .++.+++|++|+|++|+++|.+|..++++++|++|+|++|+++|.+|. ++.+++|+.+++++|+
T Consensus       239 ~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~  302 (313)
T d1ogqa_         239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK  302 (313)
T ss_dssp             GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSS
T ss_pred             ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCc
Confidence            567777777777777777777777777777777777777777777763 4566777777777775


No 42 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-41  Score=363.48  Aligned_cols=242  Identities=20%  Similarity=0.315  Sum_probs=181.5

Q ss_pred             ccccCCCCCccEEEEEEEecCC---cEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105          687 NLTSRGKKGVSSSYKVRSLAND---MQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY  762 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~~~~---~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey  762 (966)
                      ....+|+|+||.||+|++..++   ..||||++..... ...+.|.+|+..+.+ ++|||||+++|+|. ++..|+||||
T Consensus        11 l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~~~~~-~~~~~iv~E~   88 (273)
T d1mp8a_          11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHIVKLIGVIT-ENPVWIIMEL   88 (273)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHT-CCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             EEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEe-cCeEEEEEEe
Confidence            3445799999999999875443   4688887754322 223458888888877 79999999999996 4678999999


Q ss_pred             cCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105          763 IEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----  834 (966)
Q Consensus       763 ~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----  834 (966)
                      |++|+|.+++.    .++|..+..++.|||+||+|||   +.+||||||||+||+++.+.  .+|++|||++....    
T Consensus        89 ~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~--~~Kl~DfG~a~~~~~~~~  163 (273)
T d1mp8a_          89 CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTY  163 (273)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETT--EEEECC------------
T ss_pred             ccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCC--cEEEccchhheeccCCcc
Confidence            99999999875    3899999999999999999999   55899999999999999654  58999999986421    


Q ss_pred             ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHc-CCCCCCCCCCchhhHHHHHHHhhccCcccccccccccC
Q 002105          835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLT-GKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRG  910 (966)
Q Consensus       835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  910 (966)
                         ....||+.|||||++.+..|+.++|||||||++|||+| |++||....  ...+.+.+..   ...      +.+..
T Consensus       164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~--~~~~~~~i~~---~~~------~~~~~  232 (273)
T d1mp8a_         164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIEN---GER------LPMPP  232 (273)
T ss_dssp             -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHT---TCC------CCCCT
T ss_pred             eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC--HHHHHHHHHc---CCC------CCCCC
Confidence               23457899999999999999999999999999999998 898987542  2222222221   111      11112


Q ss_pred             CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          911 HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       911 ~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      ..+      .++.+++.+||+.||++||||+||++.|++++.
T Consensus       233 ~~~------~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         233 NCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             TCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            222      256678889999999999999999999998543


No 43 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-41  Score=369.03  Aligned_cols=243  Identities=16%  Similarity=0.259  Sum_probs=190.1

Q ss_pred             ccccCCCCCccEEEEEEEe-----cCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105          687 NLTSRGKKGVSSSYKVRSL-----ANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVY  760 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~-----~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~  760 (966)
                      ....+|+||||.||+|.+.     .++..||||++..... .....|.+|+..+.+ ++|||||+++|+|..++..++||
T Consensus        24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~-l~h~nIv~~~~~~~~~~~~~lv~  102 (308)
T d1p4oa_          24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQPTLVIM  102 (308)
T ss_dssp             EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGG-CCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHH-cCCCCEeeeeeEEecCCceeEEE
Confidence            3445799999999999874     2357899999864322 223457888888888 69999999999999999999999


Q ss_pred             EccCCCCHHHHHHc-------------CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecc
Q 002105          761 EYIEGKELSEVLRN-------------LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVP  827 (966)
Q Consensus       761 Ey~~~g~L~~~l~~-------------l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~  827 (966)
                      |||++|+|.++++.             ++|..+.+++.|+|+||.|||.   .+||||||||+|||+|++.  .+|++||
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~--~~Kl~DF  177 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDF--TVKIGDF  177 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTC--CEEECCT
T ss_pred             eecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCc--eEEEeec
Confidence            99999999998852             6899999999999999999994   5899999999999999765  5789999


Q ss_pred             ccceec--------CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCC-CCCCCCCCchhhHHHHHHHhhccC
Q 002105          828 GLAYCT--------DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGK-SPADADFGVHESIVEWARYCYSDC  898 (966)
Q Consensus       828 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~  898 (966)
                      |++...        .....+|+.|||||.+.+..++.++|||||||++|||+||+ .|+.+. ...+    +........
T Consensus       178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~~~----~~~~i~~~~  252 (308)
T d1p4oa_         178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQ----VLRFVMEGG  252 (308)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHH----HHHHHHTTC
T ss_pred             ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CHHH----HHHHHHhCC
Confidence            998532        23346789999999999999999999999999999999985 555432 2221    222111211


Q ss_pred             cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          899 HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       899 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      ..      .+....+      .++.+++.+||+.+|++||||+||+++|++.+.
T Consensus       253 ~~------~~p~~~~------~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         253 LL------DKPDNCP------DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             CC------CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CC------CCcccch------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            11      1111222      257778899999999999999999999998444


No 44 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=3e-40  Score=353.27  Aligned_cols=241  Identities=21%  Similarity=0.287  Sum_probs=187.6

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCccc---------ccchHHHHHHHHhhcCCCceeEEeeEEecCCee
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTIT---------TSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAA  756 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~---------~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~  756 (966)
                      +....+|+|++|.||+|+...+|+.||||++.......         .+.+.+|+..+.++-.|||||++++++.+++..
T Consensus         6 ~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~   85 (277)
T d1phka_           6 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF   85 (277)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             EEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcce
Confidence            34556789999999999998899999999986543222         124678888888843499999999999999999


Q ss_pred             EEEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec
Q 002105          757 YLVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT  833 (966)
Q Consensus       757 ~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~  833 (966)
                      |||||||++|+|.++++   .+++.+.+.++.||++||+|||   ..+||||||||+|||++.+.  .+|++|||++...
T Consensus        86 ~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~--~~kl~DFG~a~~~  160 (277)
T d1phka_          86 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQL  160 (277)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTC--CEEECCCTTCEEC
T ss_pred             EEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCC--CeEEccchheeEc
Confidence            99999999999999996   4899999999999999999999   45899999999999998654  5789999998653


Q ss_pred             C-----CCCcCCcccccccccC------CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccc
Q 002105          834 D-----SKSINSSAYVAPETKE------SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDT  902 (966)
Q Consensus       834 ~-----~~~~~~~~y~aPE~~~------~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  902 (966)
                      .     ....||+.|+|||++.      ...++.++||||+||++|||+||+.||.+... .+.. +.+   ... ... 
T Consensus       161 ~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~-~~~~-~~i---~~~-~~~-  233 (277)
T d1phka_         161 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLML-RMI---MSG-NYQ-  233 (277)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH-HHH---HHT-CCC-
T ss_pred             cCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH-HHHH-HHH---HhC-CCC-
Confidence            2     3356899999999874      34578899999999999999999999976421 1111 111   111 110 


Q ss_pred             cccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          903 WVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       903 ~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      +..+.. ...+   +   ++.+++.+|++.||++|||++||++
T Consensus       234 ~~~~~~-~~~s---~---~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         234 FGSPEW-DDYS---D---TVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CCTTTG-GGSC---H---HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCccc-ccCC---H---HHHHHHHHHccCChhHCcCHHHHHc
Confidence            011111 1122   2   5667888999999999999999864


No 45 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=2e-40  Score=368.79  Aligned_cols=239  Identities=21%  Similarity=0.246  Sum_probs=182.2

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHH--HHhhcCCCceeEEeeEEecCCeeEEEE
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQ--FGKLIMHPNIVRLHGVCRSEKAAYLVY  760 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~--~~~~~~H~niv~l~g~~~~~~~~~lv~  760 (966)
                      +....+|+||||.||+|+...+|..||||++....   ......+.+|+..  +.+.++|||||++++++.+++..|+||
T Consensus         7 ~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivm   86 (364)
T d1omwa3           7 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL   86 (364)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEE
Confidence            34456799999999999998899999999986432   1122234444332  223357999999999999999999999


Q ss_pred             EccCCCCHHHHHHc---CCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105          761 EYIEGKELSEVLRN---LSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---  834 (966)
Q Consensus       761 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---  834 (966)
                      |||+||+|.++++.   +++.....++.||+.||+|||   ..+||||||||+|||++.++  .+|++|||++....   
T Consensus        87 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g--~iKl~DFGla~~~~~~~  161 (364)
T d1omwa3          87 DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKKK  161 (364)
T ss_dssp             CCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSS--CEEECCCTTCEECSSSC
T ss_pred             EecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCC--cEEEeeeceeeecCCCc
Confidence            99999999999963   889999999999999999999   55999999999999998654  57899999986532   


Q ss_pred             -CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105          835 -SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV  912 (966)
Q Consensus       835 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  912 (966)
                       ....||+.|||||++.. ..|+.++|||||||++|||+||+.||........  .+..+....       ..+.+....
T Consensus       162 ~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~~~~~~~-------~~~~~~~~~  232 (364)
T d1omwa3         162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT-------MAVELPDSF  232 (364)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH--HHHHHHSSS-------CCCCCCSSS
T ss_pred             ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccc-------CCCCCCCCC
Confidence             34579999999999864 5689999999999999999999999976432211  111111111       111111122


Q ss_pred             cchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 002105          913 SSIQNEIVEIMNLALHCTAGDPTARPC-----ASDVT  944 (966)
Q Consensus       913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~~v~  944 (966)
                      +   +   ++.+++.+|++.||++|||     ++|++
T Consensus       233 s---~---~~~~li~~~L~~dP~~R~t~~~~~a~eil  263 (364)
T d1omwa3         233 S---P---ELRSLLEGLLQRDVNRRLGCLGRGAQEVK  263 (364)
T ss_dssp             C---H---HHHHHHHHHTCSSTTTSTTTSSSTHHHHH
T ss_pred             C---H---HHHHHHHHHcccCHHHhCCCcccCHHHHH
Confidence            2   2   4567788999999999999     46665


No 46 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.5e-40  Score=364.81  Aligned_cols=237  Identities=20%  Similarity=0.261  Sum_probs=189.9

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC---cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN---TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~---~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ++.+..+|+|+||.||+|++..+|..||||++....   ....+.+.+|+..+.+ ++|||||++++++...+..++|||
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-VNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHH-cCCCcEeecccccccccccccccc
Confidence            345667899999999999998899999999986432   2223456788877766 799999999999999999999999


Q ss_pred             ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---C
Q 002105          762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---S  835 (966)
Q Consensus       762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---~  835 (966)
                      |+++|+|.+++.   .+++.....++.||+.||+|||   +.+||||||||+|||++.++  .++++|||++....   .
T Consensus       122 ~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g--~ikL~DFG~a~~~~~~~~  196 (350)
T d1rdqe_         122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTS--CEEECCCTTCEECSSCBC
T ss_pred             cccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCC--CEEeeeceeeeecccccc
Confidence            999999999985   4899999999999999999999   45899999999999998654  68999999987643   3


Q ss_pred             CCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCCcch
Q 002105          836 KSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHVSSI  915 (966)
Q Consensus       836 ~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  915 (966)
                      ...||+.|||||++.+..|+.++|||||||++|||+||+.||.+..  ...+...+.   .. .      +......+  
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~--~~~~~~~i~---~~-~------~~~p~~~s--  262 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--PIQIYEKIV---SG-K------VRFPSHFS--  262 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HC-C------CCCCTTCC--
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC--HHHHHHHHh---cC-C------CCCCccCC--
Confidence            4578999999999999999999999999999999999999997542  111111111   11 0      11111222  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002105          916 QNEIVEIMNLALHCTAGDPTARP-----CASDVTK  945 (966)
Q Consensus       916 ~~~~~~~~~l~~~C~~~~P~~RP-----t~~~v~~  945 (966)
                       +   ++.+++.+|++.||.+|+     |++|+++
T Consensus       263 -~---~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         263 -S---DLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -H---HHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -H---HHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence             2   456778899999999994     8888864


No 47 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-40  Score=360.39  Aligned_cols=251  Identities=19%  Similarity=0.236  Sum_probs=184.2

Q ss_pred             ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcc-----cccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEE
Q 002105          687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI-----TTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~-----~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      .+..+|+|+||.||+|++..+|+.||||++......     ..+.+.+|+..+.+ ++|||||++++++..++..|+|||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE-LSHPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHH-CCCTTBCCEEEEECCTTCCEEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHh-CCCCCEeEEEeeeccCCceeehhh
Confidence            345679999999999999889999999988543211     23457788888777 799999999999999999999999


Q ss_pred             ccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105          762 YIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----  834 (966)
Q Consensus       762 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----  834 (966)
                      ||++|++..+..   .+++.+...++.||+.||+|||   +.+|+||||||+|||++.+.  .+|++|||.+....    
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~--~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTSCCC
T ss_pred             hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCC--ccccccCccccccCCCcc
Confidence            999988777664   3888999999999999999999   55899999999999999654  57899999985422    


Q ss_pred             --CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccccc----
Q 002105          835 --SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPF----  907 (966)
Q Consensus       835 --~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----  907 (966)
                        ...+||+.|||||++.. ..|+.++|||||||++|||+||+.||.+... .+.+....+. ........+.+..    
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-~~~l~~i~~~-~~~~~~~~~~~~~~~~~  233 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFET-LGTPTEEQWPDMCSLPD  233 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHH-HCCCCTTTSSSTTSSTT
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCH-HHHHHHHHHh-cCCCChhhccchhccch
Confidence              23468999999998864 4679999999999999999999999976422 2222111111 1100000000000    


Q ss_pred             ---ccCCCcchHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          908 ---IRGHVSSIQN-----EIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       908 ---~~~~~~~~~~-----~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                         ..........     .-.++.+++.+|++.||++|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         234 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence               0000000000     1135677889999999999999999875


No 48 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6e-40  Score=351.30  Aligned_cols=229  Identities=21%  Similarity=0.302  Sum_probs=182.7

Q ss_pred             ccCCCCCccEEEEEEEecCCcEEEEEEEeccCc------ccccchHHHHHHHHhhc-CCCceeEEeeEEecCCeeEEEEE
Q 002105          689 TSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT------ITTSSFWPDVSQFGKLI-MHPNIVRLHGVCRSEKAAYLVYE  761 (966)
Q Consensus       689 ~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~------~~~~~~~~e~~~~~~~~-~H~niv~l~g~~~~~~~~~lv~E  761 (966)
                      ..+|+|+||.||+|+...+|..||||++.....      .....+.+|+..+.++- .|||||++++++.+++..|+|||
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e   89 (273)
T d1xwsa_          10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE   89 (273)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEE
Confidence            456899999999999989999999999864321      12345778888887742 39999999999999999999999


Q ss_pred             ccCC-CCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC---
Q 002105          762 YIEG-KELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD---  834 (966)
Q Consensus       762 y~~~-g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~---  834 (966)
                      |+++ +++.++++   .+++.+...++.||++||+|||   +.+||||||||+|||++.+ ...++++|||++....   
T Consensus        90 ~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~-~~~vkl~DFG~a~~~~~~~  165 (273)
T d1xwsa_          90 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTV  165 (273)
T ss_dssp             CCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCSSC
T ss_pred             eccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecC-CCeEEECccccceeccccc
Confidence            9986 68888875   4899999999999999999999   5699999999999999854 3468999999986532   


Q ss_pred             -CCCcCCcccccccccCCCCC-CCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccccccccCCC
Q 002105          835 -SKSINSSAYVAPETKESKDI-TEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVDPFIRGHV  912 (966)
Q Consensus       835 -~~~~~~~~y~aPE~~~~~~~-~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  912 (966)
                       ....||+.|||||++.+..+ +.++||||+||++|||+||+.||...    +.+   .+.           ...++...
T Consensus       166 ~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~----~~i---~~~-----------~~~~~~~~  227 (273)
T d1xwsa_         166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEI---IRG-----------QVFFRQRV  227 (273)
T ss_dssp             BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHH---HHC-----------CCCCSSCC
T ss_pred             ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc----hHH---hhc-----------ccCCCCCC
Confidence             34579999999999887765 56789999999999999999998642    111   110           01111122


Q ss_pred             cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          913 SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       913 ~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      +   +   ++.+++.+|++.||++|||++|+++
T Consensus       228 s---~---~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         228 S---S---ECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             C---H---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C---H---HHHHHHHHHccCCHhHCcCHHHHhc
Confidence            2   2   4566778999999999999999875


No 49 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-39  Score=349.71  Aligned_cols=255  Identities=19%  Similarity=0.229  Sum_probs=184.4

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEc
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEY  762 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey  762 (966)
                      +..+..+|+|+||.||+|++..+|+.||||++....  ....+.+.+|+..+.+ ++|||||++++++.+++..|+||||
T Consensus         4 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~Hp~Iv~~~~~~~~~~~~~iv~e~   82 (298)
T d1gz8a_           4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPNIVKLLDVIHTENKLYLVFEF   82 (298)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTT-CCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHh-CCCCcEEEeccccccccceeEEEee
Confidence            344567899999999999998999999999985432  2234567888888777 7999999999999999999999999


Q ss_pred             cCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC----
Q 002105          763 IEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD----  834 (966)
Q Consensus       763 ~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~----  834 (966)
                      +.++.+.....    .+++.....++.||+.||+|||   +.+||||||||+|||++.+.  .++++|||.+....    
T Consensus        83 ~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~--~~kl~DFG~a~~~~~~~~  157 (298)
T d1gz8a_          83 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVR  157 (298)
T ss_dssp             CSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTS--CEEECSTTHHHHHCCCSB
T ss_pred             cCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccC--cceeccCCcceeccCCcc
Confidence            98655444332    3899999999999999999999   45899999999999998654  57899999985432    


Q ss_pred             --CCCcCCcccccccccCCCC-CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhc--cCccccc-----c
Q 002105          835 --SKSINSSAYVAPETKESKD-ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYS--DCHLDTW-----V  904 (966)
Q Consensus       835 --~~~~~~~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~  904 (966)
                        ....||+.|+|||...... ++.++||||+||++|||+||+.||.+... .+...........  .......     .
T Consensus       158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (298)
T d1gz8a_         158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPDY  236 (298)
T ss_dssp             CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCH-HHHHHHHHHhcCCCchhhcccccccccc
Confidence              2347899999999877665 47899999999999999999999975421 1111111111110  0000000     0


Q ss_pred             cccccCCC-cchHH----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105          905 DPFIRGHV-SSIQN----EIVEIMNLALHCTAGDPTARPCASDVTKT  946 (966)
Q Consensus       905 d~~~~~~~-~~~~~----~~~~~~~l~~~C~~~~P~~RPt~~~v~~~  946 (966)
                      .+...... .....    .-.++.+++.+|++.||++|||++|+++-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00000000 00000    11356678889999999999999999763


No 50 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-38  Score=343.39  Aligned_cols=251  Identities=22%  Similarity=0.291  Sum_probs=182.5

Q ss_pred             ccccccCCCCCccEEEEEEEecC-CcEEEEEEEecc--CcccccchHHHHHHHHhh--cCCCceeEEeeEEec-----CC
Q 002105          685 EENLTSRGKKGVSSSYKVRSLAN-DMQFVVKKIIDV--NTITTSSFWPDVSQFGKL--IMHPNIVRLHGVCRS-----EK  754 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~-~~~vavk~~~~~--~~~~~~~~~~e~~~~~~~--~~H~niv~l~g~~~~-----~~  754 (966)
                      ++.+..+|+|+||.||+|++..+ ++.||||++...  .......+.+|+..+.++  .+|||||+++++|..     +.
T Consensus         9 Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~   88 (305)
T d1blxa_           9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   88 (305)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             EEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCc
Confidence            45566789999999999998655 567899998543  223344567787765542  479999999999853     34


Q ss_pred             eeEEEEEccCCCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105          755 AAYLVYEYIEGKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA  830 (966)
Q Consensus       755 ~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~  830 (966)
                      ..+++||||++|++.....    .+++.....++.|++.||+|||   +.+||||||||+|||+++++  .+++.|||.+
T Consensus        89 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~--~~kl~dfg~~  163 (305)
T d1blxa_          89 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSG--QIKLADFGLA  163 (305)
T ss_dssp             EEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTC--CEEECSCCSC
T ss_pred             eEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCC--Ceeecchhhh
Confidence            6899999999988765553    3889999999999999999999   45899999999999999655  4688999987


Q ss_pred             eec-----CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccc-
Q 002105          831 YCT-----DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWV-  904 (966)
Q Consensus       831 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  904 (966)
                      ...     .....||+.|||||++.+..|+.++||||+||++|||+||+.||.+... .+.+...... ........|. 
T Consensus       164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~-~~~~~~~~~~~  241 (305)
T d1blxa_         164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDV-IGLPGEEDWPR  241 (305)
T ss_dssp             CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHH-HCCCCGGGSCT
T ss_pred             hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH-HHHHHHHHHh-hCCCchhcccc
Confidence            542     2356799999999999999999999999999999999999999976421 2211111111 1000000000 


Q ss_pred             -------------cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          905 -------------DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       905 -------------d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                                   ............   .++.+++.+|++.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCC---HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccchhhhhccccccchhhccccCC---HHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                         000000011111   24556788999999999999999865


No 51 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=2.9e-37  Score=333.90  Aligned_cols=251  Identities=13%  Similarity=0.120  Sum_probs=194.0

Q ss_pred             ccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCC
Q 002105          687 NLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGK  766 (966)
Q Consensus       687 ~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g  766 (966)
                      ....+|+||||.||+|++..+|+.||||.+....  ....+.+|++.+.++-+|+||+.+++++.++...++||||+ +|
T Consensus         9 i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~   85 (293)
T d1csna_           9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP   85 (293)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CC
Confidence            3445799999999999998899999999875432  34567788888877545699999999999999999999999 68


Q ss_pred             CHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC---CCceEEEeccccceecC-----
Q 002105          767 ELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK---DEPHLRLSVPGLAYCTD-----  834 (966)
Q Consensus       767 ~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~---~~~~~~~~~~~~~~~~~-----  834 (966)
                      +|.++++    .+++.++..++.|++.||+|||   +.+||||||||+||+++..   ....+++.|||++....     
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (293)
T d1csna_          86 SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK  162 (293)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred             CHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccc
Confidence            9999885    4889999999999999999999   6799999999999999753   24568999999986421     


Q ss_pred             --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchh-hHHHHHHHhhccCccccccc
Q 002105          835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHE-SIVEWARYCYSDCHLDTWVD  905 (966)
Q Consensus       835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  905 (966)
                              ....||+.|||||++.+..++.++|||||||++|||+||+.||.+...... ...+.+.........     
T Consensus       163 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-----  237 (293)
T d1csna_         163 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-----  237 (293)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-----
T ss_pred             cceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh-----
Confidence                    224689999999999999999999999999999999999999976433211 111111111000000     


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhccC
Q 002105          906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFRIS  954 (966)
Q Consensus       906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~~~  954 (966)
                      +.+....+      .++.+++..|++.+|++||+++.+.+.|+++++..
T Consensus       238 ~~l~~~~p------~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         238 RELCAGFP------EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             HHHTTTSC------HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCC------HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            01111122      24666777899999999999999999998866543


No 52 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.8e-37  Score=337.40  Aligned_cols=248  Identities=13%  Similarity=0.120  Sum_probs=185.8

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCc-eeEEeeEEecCCeeEEEEEccC
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPN-IVRLHGVCRSEKAAYLVYEYIE  764 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~n-iv~l~g~~~~~~~~~lv~Ey~~  764 (966)
                      .....+|+|+||.||+|++..+|+.||||.+....  ...++..|++.+.+ ++|+| |+.+.+++.+++..++||||++
T Consensus        10 ~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~-l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_          10 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKM-MQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHH-STTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             EEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHH-ccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            34456799999999999998899999999875432  34567888877777 56665 5555666678889999999995


Q ss_pred             CCCHHHHHH----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCC-CCceEEEeccccceecC-----
Q 002105          765 GKELSEVLR----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGK-DEPHLRLSVPGLAYCTD-----  834 (966)
Q Consensus       765 ~g~L~~~l~----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~-~~~~~~~~~~~~~~~~~-----  834 (966)
                       |++.+.+.    .+++.....++.|++.||+|||   +.+||||||||+|||++.. ....+++.|||++....     
T Consensus        87 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          87 -PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             -CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             -CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence             56666553    4899999999999999999999   5589999999999998643 34568999999986421     


Q ss_pred             --------CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCch--hhHHHHHHHhhccCcccccc
Q 002105          835 --------SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVH--ESIVEWARYCYSDCHLDTWV  904 (966)
Q Consensus       835 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  904 (966)
                              ....||+.|||||.+.+..++.++|||||||++|||+||+.||.......  ..+..+.......      .
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~------~  236 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST------P  236 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS------C
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC------C
Confidence                    23468999999999999999999999999999999999999997543221  1111111110000      0


Q ss_pred             cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhc
Q 002105          905 DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKTLESCFR  952 (966)
Q Consensus       905 d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~L~~~~~  952 (966)
                      .+.....++      .++.+++..||+.+|++||+++++.+.|+.++.
T Consensus       237 ~~~~~~~~p------~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         237 IEVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHTTTSC------HHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hhHhccCCC------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            011111222      356677889999999999999999999998654


No 53 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=7e-38  Score=338.34  Aligned_cols=248  Identities=19%  Similarity=0.260  Sum_probs=183.8

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI  763 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~  763 (966)
                      ..+..+|+|+||.||+|+. .+|+.||||++....  ....+.+.+|+..+.+ ++|||||++++++..++..++||||+
T Consensus         5 ~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~~~~~~~~~~~~~i~~e~~   82 (286)
T d1ob3a_           5 HGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKE-LKHSNIVKLYDVIHTKKRLVLVFEHL   82 (286)
T ss_dssp             EEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGG-CCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             eeccEEecCCCcEEEEEEe-CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHh-CCCCcEEeeeeecccCCceeEEEEee
Confidence            4456789999999999998 688999999985432  2224567888887777 79999999999999999999999999


Q ss_pred             CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC------
Q 002105          764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD------  834 (966)
Q Consensus       764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~------  834 (966)
                      .++.+..+.+   .+++.....++.||+.||+|||+   .+||||||||+|||++.++  .++++|||.+....      
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~  157 (286)
T d1ob3a_          83 DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKY  157 (286)
T ss_dssp             SEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS--CEEECCTTHHHHHCC-----
T ss_pred             hhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCC--CEEecccccceecccCcccc
Confidence            9888877765   38999999999999999999994   5899999999999999764  57899999975422      


Q ss_pred             CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcccccc--------c
Q 002105          835 SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWV--------D  905 (966)
Q Consensus       835 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d  905 (966)
                      ....+++.|+|||.+.+ ..++.++||||+||++|||+||+.||.+.. ..+......... .......|.        +
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~-~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-EADQLMRIFRIL-GTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHH-CCCCTTTSTTGGGSTTCC
T ss_pred             ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC-HHHHHHHHHHhh-CCCChhhccchhhhhhcc
Confidence            23368899999999865 456999999999999999999999997542 122211111110 000000000        0


Q ss_pred             ccccC--------CCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          906 PFIRG--------HVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       906 ~~~~~--------~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      .....        .....   ..++.+++.+|++.||++|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~---s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGL---DESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSC---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccCcchhhhcccC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00000        00111   135667888999999999999999864


No 54 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-37  Score=342.93  Aligned_cols=248  Identities=21%  Similarity=0.230  Sum_probs=180.3

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecC------CeeEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE------KAAYL  758 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~------~~~~l  758 (966)
                      +.....+|+|+||.||+|++..+|+.||||++....    ..+.+|+..+.+ ++|||||+++++|...      ...|+
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRK-LDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHH-CCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHh-cCCCCCCcEEEEEEecCccCCceEEEE
Confidence            344556899999999999998899999999986432    234578887777 7999999999998542      35789


Q ss_pred             EEEccCCCCHHHHHH------cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEecccccee
Q 002105          759 VYEYIEGKELSEVLR------NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYC  832 (966)
Q Consensus       759 v~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~  832 (966)
                      |||||++|.+....+      .+++...+.++.||++||+|||   +.+||||||||+|||++.+. ..+|++|||++..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~-~~~kl~DFG~a~~  172 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDT-AVLKLCDFGSAKQ  172 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTT-CCEEECCCTTCEE
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCC-CceeEecccchhh
Confidence            999999765444332      3899999999999999999999   66999999999999998653 3578999999865


Q ss_pred             cC-----CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHH-----------Hhh
Q 002105          833 TD-----SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWAR-----------YCY  895 (966)
Q Consensus       833 ~~-----~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-----------~~~  895 (966)
                      ..     ....||+.|+|||.+.+ ..|+.++||||+||++|||++|+.||..... .+.+....+           ...
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~-~~~l~~i~~~~g~~~~~~~~~~~  251 (350)
T d1q5ka_         173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREMN  251 (350)
T ss_dssp             CCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             ccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCH-HHHHHHHHHHhCCChHHhhhhhc
Confidence            32     23478999999998764 5789999999999999999999999975422 121111111           000


Q ss_pred             c---cCccccc-ccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          896 S---DCHLDTW-VDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       896 ~---~~~~~~~-~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      .   ....... ..+..........   .++.+++.+|++.||++|||++|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         252 PNYTEFKFPQIKAHPWTKVFRPRTP---PEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             C---CCCCCCCCCCCGGGTSCTTSC---HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cchhhccccccccCchhhhcccCCC---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0   0000000 0000000001111   24667788999999999999999985


No 55 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1e-36  Score=335.98  Aligned_cols=190  Identities=22%  Similarity=0.306  Sum_probs=161.8

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEec--CCeeEEEEEc
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS--EKAAYLVYEY  762 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~--~~~~~lv~Ey  762 (966)
                      +..+..+|+|+||.||+|+...+|+.||||++...   ..+.+.+|+..+.++-.|||||++++++..  ....++||||
T Consensus        37 y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~  113 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  113 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence            44566789999999999999899999999998532   235678888888774359999999999974  4568999999


Q ss_pred             cCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-----CCC
Q 002105          763 IEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-----SKS  837 (966)
Q Consensus       763 ~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-----~~~  837 (966)
                      |++|+|.++.+.+++.....++.||+.||+|||   +.+||||||||+|||++.+. ..++++|||.+....     ...
T Consensus       114 ~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~-~~vkl~DFG~a~~~~~~~~~~~~  189 (328)
T d3bqca1         114 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEH-RKLRLIDWGLAEFYHPGQEYNVR  189 (328)
T ss_dssp             CCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTT-TEEEECCGGGCEECCTTCCCCSC
T ss_pred             cCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCC-CeeeecccccceeccCCCccccc
Confidence            999999998889999999999999999999999   55999999999999998643 368999999986532     234


Q ss_pred             cCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCC
Q 002105          838 INSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADF  881 (966)
Q Consensus       838 ~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~  881 (966)
                      .+|+.|+|||.+.+. .++.++||||+||++|||++|+.||....
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~  234 (328)
T d3bqca1         190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH  234 (328)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             ccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCc
Confidence            689999999997765 57999999999999999999999987543


No 56 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-36  Score=333.50  Aligned_cols=253  Identities=18%  Similarity=0.304  Sum_probs=182.2

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEecc--CcccccchHHHHHHHHhhcCCCceeEEeeEEec--------CC
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDV--NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS--------EK  754 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~--------~~  754 (966)
                      +..+..+|+|+||.||+|++..+|+.||||++...  ......++.+|+..+.+ ++||||+++++++..        ++
T Consensus        12 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~h~nii~~~~~~~~~~~~~~~~~~   90 (318)
T d3blha1          12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKASPYNRCKG   90 (318)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHH-CCCTTBCCEEEEEEC----------
T ss_pred             EEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHH-hcCCCccceEeeeecccccccccCc
Confidence            34566789999999999999889999999987543  22234457788887777 799999999999865        34


Q ss_pred             eeEEEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105          755 AAYLVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY  831 (966)
Q Consensus       755 ~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~  831 (966)
                      ..|+|||||+++.+..+..   .++......++.||++||+|||   +.+||||||||+|||++.+.  .++++|||++.
T Consensus        91 ~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~--~~kl~dfg~~~  165 (318)
T d3blha1          91 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDG--VLKLADFGLAR  165 (318)
T ss_dssp             CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTS--CEEECCCTTCE
T ss_pred             eEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCC--cEEeeecceee
Confidence            6899999999887766553   4788889999999999999999   55999999999999999764  57889999885


Q ss_pred             ecC----------CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCcc
Q 002105          832 CTD----------SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHL  900 (966)
Q Consensus       832 ~~~----------~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  900 (966)
                      ...          ...+||+.|+|||.+.+. .|+.|+||||+||++|||+||+.||.+... .+.. ............
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~-~~~~-~~i~~~~~~~~~  243 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE-QHQL-ALISQLCGSITP  243 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH-HHHHHHHCCCCT
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH-HHHH-HHHHHhcCCCCh
Confidence            321          224689999999998765 689999999999999999999999975422 1111 111111110000


Q ss_pred             ccc--cc--------ccccCCCcchHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          901 DTW--VD--------PFIRGHVSSIQNE------IVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       901 ~~~--~d--------~~~~~~~~~~~~~------~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      ..+  .+        ...........+.      -.++.+++.+|++.||++|||++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            000  00        0000011111111      124567889999999999999999875


No 57 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-36  Score=337.96  Aligned_cols=251  Identities=19%  Similarity=0.279  Sum_probs=179.7

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccC--cccccchHHHHHHHHhhcCCCceeEEeeEEecCC------ee
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVN--TITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK------AA  756 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~--~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~------~~  756 (966)
                      +..+..+|+|+||.||+|++..+|+.||||++....  ....+.+.+|+..+.+ ++|||||+++++|...+      ..
T Consensus        20 Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          20 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH-MRHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHH-CCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHh-cCCCCeeEEEEEeccCccccccceE
Confidence            345567899999999999998899999999986432  1223457788888877 79999999999998654      57


Q ss_pred             EEEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC
Q 002105          757 YLVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD  834 (966)
Q Consensus       757 ~lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~  834 (966)
                      |+||||| +++|..+.+  .+++.....++.||+.||+|||   +.+||||||||+|||++.+.  .++++|||.+...+
T Consensus        99 ~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~--~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQAD  172 (346)
T ss_dssp             EEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEECC
T ss_pred             EEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhccccc--ccccccccceeccC
Confidence            9999999 578888776  5999999999999999999999   55999999999999999654  57899999987643


Q ss_pred             ---CCCcCCcccccccccCC-CCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhcc-------C-----
Q 002105          835 ---SKSINSSAYVAPETKES-KDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSD-------C-----  898 (966)
Q Consensus       835 ---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~-----  898 (966)
                         ....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+... ..............       .     
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (346)
T d1cm8a_         173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFVQRLQSDEA  251 (346)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred             CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCCh-HHHHHHHHhccCCCcHHHHhhhcchhh
Confidence               34578999999998865 4568999999999999999999999976421 11111111100000       0     


Q ss_pred             -----cccccccccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105          899 -----HLDTWVDPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTKT  946 (966)
Q Consensus       899 -----~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~~  946 (966)
                           ..................   .++.+++.+|++.||++|||++|+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~s---~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         252 KNYMKGLPELEKKDFASILTNAS---PLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHHHHHSCCCCCCCGGGTCTTCC---HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhhccCCcccccchHHhccCCC---HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                 000000000000001111   245678889999999999999999863


No 58 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-36  Score=336.54  Aligned_cols=255  Identities=17%  Similarity=0.229  Sum_probs=181.6

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc-ccccchHHHHHHHHhhcCCCceeEEeeEEecCC----eeEEE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT-ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEK----AAYLV  759 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~----~~~lv  759 (966)
                      +..+..+|+|+||.||+|+...+|+.||||++..... ...+.+.+|+..+.+ ++|||||++++++..+.    ..+++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~-l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR-FRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHH-CCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeeccccccceEEE
Confidence            4556778999999999999989999999999864332 223457788888877 79999999999997653    23555


Q ss_pred             EEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec----
Q 002105          760 YEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT----  833 (966)
Q Consensus       760 ~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~----  833 (966)
                      |||+.+|+|.++++  .+++.....++.|++.||+|||   +.+||||||||+|||++.++  .+++.|||++...    
T Consensus        89 ~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~--~~kl~DfG~a~~~~~~~  163 (345)
T d1pmea_          89 VTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDH  163 (345)
T ss_dssp             EEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCGGG
T ss_pred             EEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCC--CEEEcccCceeeccCCC
Confidence            66778999999996  5999999999999999999999   45999999999999999654  5789999987542    


Q ss_pred             -----CCCCcCCcccccccccC-CCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCc--------
Q 002105          834 -----DSKSINSSAYVAPETKE-SKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCH--------  899 (966)
Q Consensus       834 -----~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------  899 (966)
                           ....+||+.|+|||.+. ...++.++||||+||++|||+||+.||.+.... +..............        
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHH-HHHHHHhhhccCCChhhhhhhhh
Confidence                 23346899999999875 456789999999999999999999999764211 111011100000000        


Q ss_pred             --ccccccccccCCCcchHH----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002105          900 --LDTWVDPFIRGHVSSIQN----EIVEIMNLALHCTAGDPTARPCASDVTKT  946 (966)
Q Consensus       900 --~~~~~d~~~~~~~~~~~~----~~~~~~~l~~~C~~~~P~~RPt~~~v~~~  946 (966)
                        ..................    --.++.+++.+|++.||++|||++|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              000000000000000000    01246678899999999999999999863


No 59 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-36  Score=337.49  Aligned_cols=254  Identities=17%  Similarity=0.206  Sum_probs=180.5

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEec------CCee
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRS------EKAA  756 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~------~~~~  756 (966)
                      +..+..+|+|+||.||+|++..+|..||||++.....  ...+.+.+|+..+.+ ++|||||++++++..      .+..
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~~~~~f~~~~~~~~~~~~   97 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIISLLNVFTPQKTLEEFQDV   97 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHh-cCCCCeeEEEEEEecccccccCcee
Confidence            4556678999999999999988999999999864322  222346677777767 699999999999964      3678


Q ss_pred             EEEEEccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC--
Q 002105          757 YLVYEYIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD--  834 (966)
Q Consensus       757 ~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~--  834 (966)
                      |+|||||.+|.+..+...+++...+.++.||+.||+|||   +.+|+||||||+|||++.+.  .+++++||.+....  
T Consensus        98 ~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~--~~kl~df~~~~~~~~~  172 (355)
T d2b1pa1          98 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGTS  172 (355)
T ss_dssp             EEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTC--CEEECCCCC-------
T ss_pred             EEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCcccccccccc--ceeeechhhhhccccc
Confidence            999999987777666667999999999999999999999   55999999999999999654  46788888765422  


Q ss_pred             ---CCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHH------------------
Q 002105          835 ---SKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARY------------------  893 (966)
Q Consensus       835 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~------------------  893 (966)
                         ....+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.... .........                  
T Consensus       173 ~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (355)
T d2b1pa1         173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTVRN  251 (355)
T ss_dssp             --------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred             cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH-HHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence               3346899999999999999999999999999999999999999754211 111000000                  


Q ss_pred             hhcc-Cccc-----ccc-cccccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          894 CYSD-CHLD-----TWV-DPFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       894 ~~~~-~~~~-----~~~-d~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      .... ....     ... +...............++.+++.+|++.||++|||++||++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0000 0000     000 00000111111123345778899999999999999999973


No 60 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.3e-36  Score=326.54  Aligned_cols=253  Identities=19%  Similarity=0.259  Sum_probs=186.4

Q ss_pred             cccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105          686 ENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI  763 (966)
Q Consensus       686 ~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~  763 (966)
                      ..+..+|+|+||.||+|++..+|+.||||++.....  .....+.+|+..+.+ ++|||||+++++|..++..++||||+
T Consensus         5 ~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~iv~~~~   83 (292)
T d1unla_           5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTT-CCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHh-cCcCCEEeeccccccccceeEEeeec
Confidence            445678999999999999999999999999854322  223457788888777 79999999999999999999999999


Q ss_pred             CCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecCC-----
Q 002105          764 EGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTDS-----  835 (966)
Q Consensus       764 ~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~~-----  835 (966)
                      .++++..+++   .+++..+..++.|+++||+|||   ..+||||||||+|||++.+.  .++++|||.+.....     
T Consensus        84 ~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~--~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSCCSCC
T ss_pred             cccccccccccccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCC--ceeeeecchhhcccCCCccc
Confidence            9999988875   4889999999999999999999   45999999999999999654  578999999865322     


Q ss_pred             -CCcCCcccccccccCCCC-CCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccc------c---
Q 002105          836 -KSINSSAYVAPETKESKD-ITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTW------V---  904 (966)
Q Consensus       836 -~~~~~~~y~aPE~~~~~~-~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---  904 (966)
                       ...+++.|+|||.+.... ++.++||||+||++|||++|+.||.......+.. ..+...........+      .   
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL-KRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHH-HHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHH-HHHHhhcCCCChhhhhhhhhccccc
Confidence             234678899999887665 6899999999999999999999975432222222 111111110000000      0   


Q ss_pred             -cccccC--CC-cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          905 -DPFIRG--HV-SSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       905 -d~~~~~--~~-~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                       .+....  .. ......-.++.+++.+|++.||.+|||++||++
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000000  00 000011124566778999999999999999865


No 61 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-36  Score=327.47  Aligned_cols=242  Identities=22%  Similarity=0.284  Sum_probs=183.7

Q ss_pred             ccccccCCCCCccEEEEEEEec---CCcEEEEEEEecc----CcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLA---NDMQFVVKKIIDV----NTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAY  757 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~---~~~~vavk~~~~~----~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~  757 (966)
                      +..+..+|+|+||.||+|+...   +|..||||++...    +....+.+.+|+..+.++-+|||||++++++.+++..+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            4556678999999999998743   5789999988532    22234567889988888434489999999999999999


Q ss_pred             EEEEccCCCCHHHHHH---cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceec-
Q 002105          758 LVYEYIEGKELSEVLR---NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCT-  833 (966)
Q Consensus       758 lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~-  833 (966)
                      +|||||++|+|.++++   .+.......++.|++.||+|+|   +.+||||||||+||++|.++  .+++.|||++... 
T Consensus       106 ~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~--~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTS--CEEESCSSEEEECC
T ss_pred             eeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCC--CEEEeeccchhhhc
Confidence            9999999999999986   3677888889999999999999   55899999999999999764  5789999998642 


Q ss_pred             ------CCCCcCCcccccccccCCC--CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccccccc
Q 002105          834 ------DSKSINSSAYVAPETKESK--DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLDTWVD  905 (966)
Q Consensus       834 ------~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  905 (966)
                            .....|++.|+|||.+.+.  .++.|+||||+||++|||+||+.||.+.... +......+....       ..
T Consensus       181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~-~~~~~i~~~~~~-------~~  252 (322)
T d1vzoa_         181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILK-------SE  252 (322)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHH-------CC
T ss_pred             ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhccc-------CC
Confidence                  1234689999999988754  4688999999999999999999999765322 111111111111       11


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002105          906 PFIRGHVSSIQNEIVEIMNLALHCTAGDPTARPC-----ASDVTK  945 (966)
Q Consensus       906 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----~~~v~~  945 (966)
                      +.+....+      .++.+++.+|++.||++|||     ++|+++
T Consensus       253 ~~~~~~~s------~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         253 PPYPQEMS------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCCCTTSC------HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCCcccCC------HHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            11112222      25666778999999999995     677764


No 62 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.4e-36  Score=331.30  Aligned_cols=253  Identities=17%  Similarity=0.249  Sum_probs=180.0

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCc--ccccchHHHHHHHHhhcCCCceeEEeeEEecC-----CeeE
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNT--ITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSE-----KAAY  757 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~--~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~-----~~~~  757 (966)
                      ++.+..+|+|+||.||+|++..+|+.||||++.....  ...+.+.+|+..+.+ ++|||||++++++...     ...+
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-MKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHH-CCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHh-cCCCCeeeEEEEEeeccccccCceE
Confidence            4456678999999999999989999999999864322  223457788888877 6999999999999643     3456


Q ss_pred             EEEEccCCCCHHHHHH--cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccceecC-
Q 002105          758 LVYEYIEGKELSEVLR--NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAYCTD-  834 (966)
Q Consensus       758 lv~Ey~~~g~L~~~l~--~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~~~~-  834 (966)
                      +||||+.+|+|.++++  .+++.+...++.||+.||+|||   +.+|+||||||+|||++.++  .+++.|||.+.... 
T Consensus        99 ~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~--~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTDD  173 (348)
T ss_dssp             EEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTC--CEEECCC----CCTG
T ss_pred             EEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccc--cccccccchhcccCc
Confidence            7788889999999996  4999999999999999999999   55899999999999999764  46888999875432 


Q ss_pred             --CCCcCCcccccccccCCC-CCCCcchHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHhhccCccc----------
Q 002105          835 --SKSINSSAYVAPETKESK-DITEKGDIYGFGLILIDLLTGKSPADADFGVHESIVEWARYCYSDCHLD----------  901 (966)
Q Consensus       835 --~~~~~~~~y~aPE~~~~~-~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------  901 (966)
                        ....||+.|+|||...+. .++.++||||+||++|||++|+.||.+.... ... ..+.........+          
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~-~~~-~~i~~~~~~~~~~~~~~~~~~~~  251 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQL-KLILRLVGTPGAELLKKISSESA  251 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHH-HHHHHHHCCCCHHHHTTCCCHHH
T ss_pred             ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH-HHH-HHHHHhcCCCChHHhhhccchhh
Confidence              345678899999986665 4688999999999999999999999764211 111 1111000000000          


Q ss_pred             -ccccccccCCCcchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          902 -TWVDPFIRGHVSSIQ----NEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       902 -~~~d~~~~~~~~~~~----~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                       .+.............    ..-.++.+++.+|++.||++|||++|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence             000000000000000    00124567888999999999999999986


No 63 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=1.7e-31  Score=298.60  Aligned_cols=258  Identities=15%  Similarity=0.185  Sum_probs=178.4

Q ss_pred             ccccccCCCCCccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhh----------cCCCceeEEeeEEec--
Q 002105          685 EENLTSRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKL----------IMHPNIVRLHGVCRS--  752 (966)
Q Consensus       685 ~~~~~~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~----------~~H~niv~l~g~~~~--  752 (966)
                      +..+..+|+|+||.||+|+...+|+.||||++.... ...+.+.+|+..+.++          +.|||||++++++..  
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            445667899999999999998999999999985432 2234556676655542          247899999998864  


Q ss_pred             CCeeEEEEEccCCCCHHHH-HH-----cCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCC----ceE
Q 002105          753 EKAAYLVYEYIEGKELSEV-LR-----NLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDE----PHL  822 (966)
Q Consensus       753 ~~~~~lv~Ey~~~g~L~~~-l~-----~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~----~~~  822 (966)
                      ....+++|+++..+..... ..     .+++.....++.||++||+|||+.  .+|+||||||+|||++.+..    ..+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~~~  171 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQI  171 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCccccccee
Confidence            4567778887766543322 21     378888999999999999999952  48999999999999975432    357


Q ss_pred             EEeccccceec---CCCCcCCcccccccccCCCCCCCcchHHHHHHHHHHHHcCCCCCCCCCCc-----hhhHHHHHHHh
Q 002105          823 RLSVPGLAYCT---DSKSINSSAYVAPETKESKDITEKGDIYGFGLILIDLLTGKSPADADFGV-----HESIVEWARYC  894 (966)
Q Consensus       823 ~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S~Gv~l~el~tg~~p~~~~~~~-----~~~~~~~~~~~  894 (966)
                      ++.|||.+...   .....||+.|+|||+.....++.++||||+||+++||++|+.||......     .+.....+...
T Consensus       172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l  251 (362)
T d1q8ya_         172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL  251 (362)
T ss_dssp             EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred             eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence            89999987642   33457899999999999999999999999999999999999999754221     11111111100


Q ss_pred             h-----------------ccCccccccccc--------ccCCCcchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002105          895 Y-----------------SDCHLDTWVDPF--------IRGHVSSIQNEIVEIMNLALHCTAGDPTARPCASDVTK  945 (966)
Q Consensus       895 ~-----------------~~~~~~~~~d~~--------~~~~~~~~~~~~~~~~~l~~~C~~~~P~~RPt~~~v~~  945 (966)
                      -                 ........+...        .............++.+++.+|++.||.+|||++|+++
T Consensus       252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            0                 000000000000        00011112344567888999999999999999999975


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96  E-value=2.7e-30  Score=282.57  Aligned_cols=250  Identities=29%  Similarity=0.436  Sum_probs=172.6

Q ss_pred             CcEEEccCCcccc--cCCCCccCCCCccEEEccC-CCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEc
Q 002105          350 LTVIDLSTNFLTG--KIPETLCDSGSLFKLILFS-NSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLD  426 (966)
Q Consensus       350 L~~L~Ls~N~l~~--~~p~~~~~~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~Ld  426 (966)
                      ++.|+|++|.++|  .+|..+..+++|++|++++ |+++|.+|..+.++++|++|+|++|++.+..+..+..++.|++++
T Consensus        52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~  131 (313)
T d1ogqa_          52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD  131 (313)
T ss_dssp             EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred             EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccc
Confidence            4445555554444  2445555555555555553 555555666666666666666666666666666666666666666


Q ss_pred             ccCCCCCCccCcchhccCCCcEecCCCCcCCccCCC-CcCccc-ccccccccccccccCCCcccCcCCCCEEEccCCccC
Q 002105          427 ISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPD-SFGSDQ-LENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLF  504 (966)
Q Consensus       427 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  504 (966)
                      +++|.+.+.+|..+..++.|+.+++++|.+++.+|. ...+.. ++.+++++|++++..|..+..+..+ .+++++|...
T Consensus       132 l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~  210 (313)
T d1ogqa_         132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLE  210 (313)
T ss_dssp             CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEE
T ss_pred             cccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence            666666666666666667777777777777666665 334433 3667777777777777777666544 6778888887


Q ss_pred             CCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccCCcccccCCCCCeeeCcCCcccccCCCCCc
Q 002105          505 GDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKIPQTLGRVASLVQVNISHNHFHGSLPSTGA  584 (966)
Q Consensus       505 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~  584 (966)
                      |.+|..+..+++|+.+++++|.+++.+| .++.+++|+.|||++|+++|.+|..++++++|++|||++|+|+|.+|..+.
T Consensus       211 ~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~  289 (313)
T d1ogqa_         211 GDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN  289 (313)
T ss_dssp             ECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred             cccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCccc
Confidence            7888877788888888888888877655 467777888888888888888888888888888888888888888887777


Q ss_pred             cCCCccccccCC-CCCCC
Q 002105          585 FLAINATAVAGN-DLCGG  601 (966)
Q Consensus       585 ~~~~~~~~~~gn-~lcg~  601 (966)
                      +..+....+.|| .+||.
T Consensus       290 L~~L~~l~l~~N~~l~g~  307 (313)
T d1ogqa_         290 LQRFDVSAYANNKCLCGS  307 (313)
T ss_dssp             GGGSCGGGTCSSSEEEST
T ss_pred             CCCCCHHHhCCCccccCC
Confidence            777777777777 57775


No 65 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95  E-value=4.8e-27  Score=264.09  Aligned_cols=324  Identities=25%  Similarity=0.307  Sum_probs=147.3

Q ss_pred             CCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEE
Q 002105           83 HLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLD  162 (966)
Q Consensus        83 ~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~  162 (966)
                      .+.+|++|++++|.|+ .++ + +..+++|++|+|++|+|++..+++.+++|++|++++|.+++..  .++.+++|+.|+
T Consensus        42 ~l~~l~~L~l~~~~I~-~l~-g-l~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~  116 (384)
T d2omza2          42 DLDQVTTLQADRLGIK-SID-G-VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLT  116 (384)
T ss_dssp             HHTTCCEEECCSSCCC-CCT-T-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEE
T ss_pred             HhCCCCEEECCCCCCC-Ccc-c-cccCCCCCEEeCcCCcCCCCccccCCccccccccccccccccc--cccccccccccc
Confidence            3455666666666665 332 1 3344666666666666665445566666666666666665432  255666666666


Q ss_pred             ccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccc
Q 002105          163 LGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTG  242 (966)
Q Consensus       163 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~  242 (966)
                      +++|.+++..+  ......+..+....|.+....+.................     ....+...+.........|... 
T Consensus       117 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-  188 (384)
T d2omza2         117 LFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT-----DLKPLANLTTLERLDISSNKVS-  188 (384)
T ss_dssp             CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCC-----CCGGGTTCTTCCEEECCSSCCC-
T ss_pred             ccccccccccc--ccccccccccccccccccccccccccccccccccccccc-----hhhhhccccccccccccccccc-
Confidence            66665543322  223344445554444443222221111111111111111     1122333333334444333322 


Q ss_pred             cCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCC
Q 002105          243 QIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLAS  322 (966)
Q Consensus       243 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~  322 (966)
                       .+..+..+++++.+++++|.+++..|  +...++|++|++++|.++..  +.+..+++|+.|++++|.+++..+  +..
T Consensus       189 -~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~  261 (384)
T d2omza2         189 -DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG  261 (384)
T ss_dssp             -CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred             -cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccc
Confidence             23334455555555555555554322  33445555555555555431  234455555555555555554322  444


Q ss_pred             CCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceee
Q 002105          323 MPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVR  402 (966)
Q Consensus       323 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~  402 (966)
                      +++|+.|++++|++++..  .+..+..++.++++.|.+++.  ..+..+++++.|++++|++++..+  +..+++|++|+
T Consensus       262 ~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~  335 (384)
T d2omza2         262 LTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF  335 (384)
T ss_dssp             CTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred             cccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcc--cccCCCCCEEE
Confidence            555555555555554322  234444555555555554431  123333444444444444443221  33444444444


Q ss_pred             ccccccCCcCChhhcCCCcccEEcccCCCCCC
Q 002105          403 LQNNRLSGELSSEFTRLPLVYFLDISGNDLSG  434 (966)
Q Consensus       403 L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~  434 (966)
                      +++|++++. + .+..+++|++|++++|++++
T Consensus       336 L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~  365 (384)
T d2omza2         336 FANNKVSDV-S-SLANLTNINWLSAGHNQISD  365 (384)
T ss_dssp             CCSSCCCCC-G-GGGGCTTCCEEECCSSCCCB
T ss_pred             CCCCCCCCC-h-hHcCCCCCCEEECCCCcCCC
Confidence            444444321 1 23344444444444444443


No 66 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95  E-value=3.8e-27  Score=264.93  Aligned_cols=342  Identities=24%  Similarity=0.283  Sum_probs=160.6

Q ss_pred             CCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEE
Q 002105          131 LSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIY  210 (966)
Q Consensus       131 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~  210 (966)
                      +.+|++|++++|.++. + +.+..+++|++|+|++|++++..  .++++++|++|++++|++.+..  .++.+++|+.|+
T Consensus        43 l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~  116 (384)
T d2omza2          43 LDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLT  116 (384)
T ss_dssp             HTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEE
T ss_pred             hCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--cccccccccccc
Confidence            3344444444444432 1 23444445555555555444322  1444555555555555544321  244555555555


Q ss_pred             ccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcc
Q 002105          211 LGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSG  290 (966)
Q Consensus       211 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~  290 (966)
                      +++|.+++..+  ......+..+....|.+....+................     .....+...+.........|... 
T Consensus       117 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-  188 (384)
T d2omza2         117 LFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV-----TDLKPLANLTTLERLDISSNKVS-  188 (384)
T ss_dssp             CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESC-----CCCGGGTTCTTCCEEECCSSCCC-
T ss_pred             ccccccccccc--cccccccccccccccccccccccccccccccccccccc-----chhhhhccccccccccccccccc-
Confidence            55555443221  22334445555555544432221111111111111111     11122333333334444433322 


Q ss_pred             cCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccC
Q 002105          291 EIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCD  370 (966)
Q Consensus       291 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~  370 (966)
                       ....+..+++++.+++++|.+++..|  +..+++|+.|++++|.++..  +.+..+++|+.+++++|.+++..+  +  
T Consensus       189 -~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~--  259 (384)
T d2omza2         189 -DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L--  259 (384)
T ss_dssp             -CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G--
T ss_pred             -cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--c--
Confidence             22334444555555555555554332  23344555555555555431  234445555555555555543221  2  


Q ss_pred             CCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEec
Q 002105          371 SGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLN  450 (966)
Q Consensus       371 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~  450 (966)
                                            ..+++|+.|++++|++++..  .+..++.++.++++.|++++.  ..+..+++++.|+
T Consensus       260 ----------------------~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~  313 (384)
T d2omza2         260 ----------------------SGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLT  313 (384)
T ss_dssp             ----------------------TTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEE
T ss_pred             ----------------------cccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEE
Confidence                                  23334444444444443322  133444444555555554432  1234455555555


Q ss_pred             CCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCce
Q 002105          451 LAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQ  526 (966)
Q Consensus       451 Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~  526 (966)
                      +++|++++.. .+..+++|+.|++++|++++ ++ .+..+++|++|++++|++++.+|  +.++++|+.|+|++|.
T Consensus       314 ls~n~l~~l~-~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~Na  384 (384)
T d2omza2         314 LYFNNISDIS-PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQA  384 (384)
T ss_dssp             CCSSCCSCCG-GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCEE
T ss_pred             CCCCCCCCCc-ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCCc
Confidence            5555555432 23345566666666666654 22 57778888888888888876654  7788888888888873


No 67 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93  E-value=2.8e-24  Score=233.40  Aligned_cols=243  Identities=24%  Similarity=0.371  Sum_probs=156.1

Q ss_pred             CcccceeeCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC--
Q 002105           50 CKWNGISCQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP--  127 (966)
Q Consensus        50 c~w~gv~c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~--  127 (966)
                      |.|++|.|++           ++++ .+|+.+.  +.+++|||++|+|+ .+|+..|..+++|++|++++|.+....|  
T Consensus        10 c~~~~~~C~~-----------~~L~-~lP~~l~--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~   74 (305)
T d1xkua_          10 CHLRVVQCSD-----------LGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGA   74 (305)
T ss_dssp             EETTEEECTT-----------SCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTT
T ss_pred             ecCCEEEecC-----------CCCC-ccCCCCC--CCCCEEECcCCcCC-CcChhHhhccccccccccccccccccchhh
Confidence            7899999975           2344 4455553  57889999999987 7887777777888888888888776433  


Q ss_pred             CCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCc--ccCCcccccCCc
Q 002105          128 IGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLI--GSIPREIGQLRN  205 (966)
Q Consensus       128 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~l~~l~~  205 (966)
                      +..+++|++|++++|+++. +|..+  ...|+.|++..|.+.+..+..+.....++.++...|...  ...+..+..+++
T Consensus        75 f~~l~~L~~L~l~~n~l~~-l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~  151 (305)
T d1xkua_          75 FAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK  151 (305)
T ss_dssp             TTTCTTCCEEECCSSCCSB-CCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTT
T ss_pred             hhCCCccCEecccCCccCc-Cccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccc
Confidence            5677777788887777764 44332  356777777777776655555666666667766666432  233445566666


Q ss_pred             ceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccC
Q 002105          206 LKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSD  285 (966)
Q Consensus       206 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~  285 (966)
                      |+++++++|.++ .+|..+  +++|++|++++|...+..+..|.+++.+++|++++|++++..+..+.++++|++|+|++
T Consensus       152 L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~  228 (305)
T d1xkua_         152 LSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN  228 (305)
T ss_dssp             CCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred             cCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccc
Confidence            666666666665 334332  45566666666666665666666666666666666666655555566666666666666


Q ss_pred             CcCcccCchhhcCCCCCceecccCCCCCC
Q 002105          286 NYLSGEIPEEVIQLQNLEILHLFSNNFTG  314 (966)
Q Consensus       286 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~  314 (966)
                      |.++ .+|.++..+++|+.|+|++|+++.
T Consensus       229 N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~  256 (305)
T d1xkua_         229 NKLV-KVPGGLADHKYIQVVYLHNNNISA  256 (305)
T ss_dssp             SCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred             cccc-ccccccccccCCCEEECCCCccCc
Confidence            6665 345555556666666666665553


No 68 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92  E-value=1.1e-23  Score=228.73  Aligned_cols=223  Identities=23%  Similarity=0.327  Sum_probs=117.1

Q ss_pred             CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEcc
Q 002105          133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLG  212 (966)
Q Consensus       133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~  212 (966)
                      ++++|||++|+|+...+.+|.++++|++|++++|.+....|..|.++++|++|++++|+++. +|..+  ...++.|++.
T Consensus        32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~~--~~~l~~L~~~  108 (305)
T d1xkua_          32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVH  108 (305)
T ss_dssp             TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSC--CTTCCEEECC
T ss_pred             CCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCc-Cccch--hhhhhhhhcc
Confidence            44444444444443333445555555555555555554444455555555555555555542 23222  2344555555


Q ss_pred             CCCCCCCCCcCccCCCCCCEEEeeccccc--ccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcc
Q 002105          213 YNNLSGEIPKEIGDLTSLNHLDLVYNNLT--GQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSG  290 (966)
Q Consensus       213 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~  290 (966)
                      .|.+.+..+..+.....++.++...|...  ...+..+..+++|+++++++|.++. +|..+  +++|+.|++++|..++
T Consensus       109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~~~  185 (305)
T d1xkua_         109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKITK  185 (305)
T ss_dssp             SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCCCE
T ss_pred             ccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cCccc--CCccCEEECCCCcCCC
Confidence            55554433333444455555555554322  2233445555566666666665542 33222  3556666666666655


Q ss_pred             cCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccc
Q 002105          291 EIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTG  362 (966)
Q Consensus       291 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~  362 (966)
                      ..+..+..++.++.|++++|.+++..+.++.++++|++|+|++|.++ .+|..+..+++|++|+|++|+|+.
T Consensus       186 ~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~  256 (305)
T d1xkua_         186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA  256 (305)
T ss_dssp             ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred             CChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCc
Confidence            55555555666666666666665555555566666666666666665 345556666666666666666654


No 69 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=3.5e-24  Score=230.04  Aligned_cols=223  Identities=26%  Similarity=0.264  Sum_probs=118.1

Q ss_pred             EEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEcc-CCc
Q 002105          209 IYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLS-DNY  287 (966)
Q Consensus       209 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls-~N~  287 (966)
                      ++.+++.++ .+|..+.  +.+++|+|++|+++...+.+|.++++|++|++++|++....+..+.++..++.++.. .|.
T Consensus        16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~   92 (284)
T d1ozna_          16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ   92 (284)
T ss_dssp             EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred             EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence            345555554 4454442  345666666666665444556666666666666666655555555555555555443 333


Q ss_pred             CcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCC
Q 002105          288 LSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPET  367 (966)
Q Consensus       288 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~  367 (966)
                      ++...+..+.++++|+.|++++|.+....+..+..+++|+.+++++                        |.+++..+..
T Consensus        93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~------------------------N~l~~i~~~~  148 (284)
T d1ozna_          93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD------------------------NALQALPDDT  148 (284)
T ss_dssp             CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS------------------------SCCCCCCTTT
T ss_pred             cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcc------------------------ccccccChhH
Confidence            4433344444445555555555444444444444444444444444                        4444444444


Q ss_pred             ccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCc
Q 002105          368 LCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQ  447 (966)
Q Consensus       368 ~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~  447 (966)
                      |....+|+.|++++|++++..+.+|.++++|+++++++|++++..|..|..+++|++||+++|++.+..+..+..+++|+
T Consensus       149 f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~  228 (284)
T d1ozna_         149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ  228 (284)
T ss_dssp             TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred             hccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccC
Confidence            44444445555555555444445555555555555555555555555555555556666666666555555555555666


Q ss_pred             EecCCCCcCCc
Q 002105          448 MLNLAGNNFSG  458 (966)
Q Consensus       448 ~L~Ls~N~l~~  458 (966)
                      +|+|++|.+.+
T Consensus       229 ~L~l~~N~l~C  239 (284)
T d1ozna_         229 YLRLNDNPWVC  239 (284)
T ss_dssp             EEECCSSCEEC
T ss_pred             EEEecCCCCCC
Confidence            66666665543


No 70 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90  E-value=1.8e-23  Score=224.50  Aligned_cols=224  Identities=23%  Similarity=0.230  Sum_probs=176.2

Q ss_pred             CEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEecc-c
Q 002105          183 QIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLY-Q  261 (966)
Q Consensus       183 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~-~  261 (966)
                      ..++.++++++ .+|..+.  +.+++|+|++|+++...+..|.++++|++|++++|++....+..+.+++.++.+... .
T Consensus        14 ~~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~   90 (284)
T d1ozna_          14 VTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN   90 (284)
T ss_dssp             CEEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred             eEEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence            34567777776 5676654  578999999999997666789999999999999999999888889999999998765 5


Q ss_pred             cccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCC
Q 002105          262 NKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIP  341 (966)
Q Consensus       262 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p  341 (966)
                      |.++...+..|.++++|++|++++|.+....+..+....+|+.+++++|++++..+..|..+++|+.|++++|++++..+
T Consensus        91 ~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~  170 (284)
T d1ozna_          91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE  170 (284)
T ss_dssp             TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred             cccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccch
Confidence            66777778889999999999999999987777888889999999999999998778888889999999999999987777


Q ss_pred             ccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccCCCCCCCCCCccccCccCceeeccccccC
Q 002105          342 SNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFSNSLEGKIPNSLSTCKSLRRVRLQNNRLS  409 (966)
Q Consensus       342 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~  409 (966)
                      ..|..+++|+.+++++|.+++..|..|..+++|+.|++++|++.+..|.+|..+++|++|++++|.+.
T Consensus       171 ~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~  238 (284)
T d1ozna_         171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV  238 (284)
T ss_dssp             TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred             hhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence            78888888888888888887766666655555555555555554444444444444444444444443


No 71 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=3.8e-22  Score=211.67  Aligned_cols=203  Identities=25%  Similarity=0.252  Sum_probs=146.0

Q ss_pred             eCCCCCEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcE
Q 002105           57 CQNSTHVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEI  136 (966)
Q Consensus        57 c~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~  136 (966)
                      |...+...++|.++++|+. +|+.+.  +++++|||++|+|+ .+|...|..+++|++|+|++|+|+...+++.+++|++
T Consensus         6 ~~~~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~   81 (266)
T d1p9ag_           6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGT   81 (266)
T ss_dssp             EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCE
T ss_pred             EcccCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCC-CcCHHHhhccccccccccccccccccccccccccccc
Confidence            4444444455778888884 566654  57899999999998 6888888888999999999998886555677888888


Q ss_pred             EeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCC
Q 002105          137 LDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNL  216 (966)
Q Consensus       137 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l  216 (966)
                      |+|++|++++ .+..+..+++|++|++++|.+.+..+..+..+.++++|++++|.+....+..+..+++|+.|++++|++
T Consensus        82 L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l  160 (266)
T d1p9ag_          82 LDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL  160 (266)
T ss_dssp             EECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred             cccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccc
Confidence            8888888874 566777788888888888877766666677777777777777777665555666666667777777666


Q ss_pred             CCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccC
Q 002105          217 SGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLT  265 (966)
Q Consensus       217 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~  265 (966)
                      ++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus       161 ~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~  208 (266)
T d1p9ag_         161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL  208 (266)
T ss_dssp             SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred             cccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence            6655556666666666666666666 45666666666666666666543


No 72 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87  E-value=8e-22  Score=209.09  Aligned_cols=180  Identities=23%  Similarity=0.184  Sum_probs=148.0

Q ss_pred             ccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecCCCCcCCccCCCCcCcccccccccc
Q 002105          396 KSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLS  475 (966)
Q Consensus       396 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls  475 (966)
                      +++++|+|++|+|++..+..|.++++|++|+|++|+|+...  .+..+++|++|+|++|++++..+.+..+++|+.|+++
T Consensus        31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~  108 (266)
T d1p9ag_          31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--VDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVS  108 (266)
T ss_dssp             TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--CCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECC
T ss_pred             cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccc
Confidence            35677777777777666677777777777777777776432  2356778888888888887665556677888888888


Q ss_pred             cccccccCCCcccCcCCCCEEEccCCccCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeCCCCcCcccC
Q 002105          476 ENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDLSENQLSGKI  555 (966)
Q Consensus       476 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdLs~N~l~g~~  555 (966)
                      +|.+....+..+..+.++..|++++|.+....+..+..++.|+.|++++|+|++..+..|..+++|+.|||++|+|+ .+
T Consensus       109 ~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~l  187 (266)
T d1p9ag_         109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI  187 (266)
T ss_dssp             SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred             ccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-cc
Confidence            88888877888888999999999999998888888888999999999999999888888999999999999999998 78


Q ss_pred             CcccccCCCCCeeeCcCCccccc
Q 002105          556 PQTLGRVASLVQVNISHNHFHGS  578 (966)
Q Consensus       556 p~~l~~l~~L~~l~ls~N~l~g~  578 (966)
                      |..+..+++|+.|++++|++.+.
T Consensus       188 p~~~~~~~~L~~L~L~~Np~~Cd  210 (266)
T d1p9ag_         188 PKGFFGSHLLPFAFLHGNPWLCN  210 (266)
T ss_dssp             CTTTTTTCCCSEEECCSCCBCCS
T ss_pred             ChhHCCCCCCCEEEecCCCCCCC
Confidence            88888899999999999998764


No 73 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78  E-value=3.5e-17  Score=180.08  Aligned_cols=313  Identities=28%  Similarity=0.310  Sum_probs=154.0

Q ss_pred             CEEEEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCC
Q 002105           62 HVNAIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSN  141 (966)
Q Consensus        62 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~  141 (966)
                      +++.|||++++++. +|+.   +++|++|+|++|+|+ .+|..    ..+|+.|++++|+++....  -.+.|++||+++
T Consensus        39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~l~~n~l~~l~~--lp~~L~~L~L~~  107 (353)
T d1jl5a_          39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKALSD--LPPLLEYLGVSN  107 (353)
T ss_dssp             TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSCCCS--CCTTCCEEECCS
T ss_pred             CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc----hhhhhhhhhhhcccchhhh--hccccccccccc
Confidence            45677888888763 4542   467788888888887 67753    2577777877777763211  113577777777


Q ss_pred             CCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCC
Q 002105          142 NMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIP  221 (966)
Q Consensus       142 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p  221 (966)
                      |.+.. +|. ++.+++|++|++++|.+.... .   ....+..+.+..+...  .+..+..++.++.++++.|.... .+
T Consensus       108 n~l~~-lp~-~~~l~~L~~L~l~~~~~~~~~-~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~-~~  178 (353)
T d1jl5a_         108 NQLEK-LPE-LQNSSFLKIIDVDNNSLKKLP-D---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKK-LP  178 (353)
T ss_dssp             SCCSS-CCC-CTTCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSS-CC
T ss_pred             ccccc-ccc-hhhhccceeeccccccccccc-c---ccccccchhhcccccc--ccccccccccceecccccccccc-cc
Confidence            77763 443 466777777777776654322 1   2344555555544432  23344555556666666655442 11


Q ss_pred             cCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCC
Q 002105          222 KEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQN  301 (966)
Q Consensus       222 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~  301 (966)
                      ..   ....+.+....+.+. .+| .+..++.|+.+++++|.... .+.   ...++..+.+.++.+...          
T Consensus       179 ~~---~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~----------  239 (353)
T d1jl5a_         179 DL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDL----------  239 (353)
T ss_dssp             CC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCC----------
T ss_pred             cc---ccccccccccccccc-ccc-cccccccccccccccccccc-ccc---cccccccccccccccccc----------
Confidence            11   112334444433333 122 23445555555555554432 221   123344444444444321          


Q ss_pred             CceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccC
Q 002105          302 LEILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEIPSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFS  381 (966)
Q Consensus       302 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~  381 (966)
                                     +.   ..+.+...++..+.+.+.. .   -.......++..|.+.+..    ...++|++|++++
T Consensus       240 ---------------~~---~~~~l~~~~~~~~~~~~l~-~---l~~~~~~~~~~~~~~~~~~----~~~~~L~~L~Ls~  293 (353)
T d1jl5a_         240 ---------------PE---LPQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRSLC----DLPPSLEELNVSN  293 (353)
T ss_dssp             ---------------CC---CCTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSEEC----CCCTTCCEEECCS
T ss_pred             ---------------cc---ccccccccccccccccccc-c---ccchhcccccccCcccccc----ccCCCCCEEECCC
Confidence                           11   1223333333333332210 0   0112233444444433221    1123455555555


Q ss_pred             CCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCCCCccCcchhccCCCcEecC
Q 002105          382 NSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDLSGRIGEQKWEMTSLQMLNL  451 (966)
Q Consensus       382 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~l~~L~~L~L  451 (966)
                      |+++ .+|..   +++|+.|+|++|+|+. +|.   .+++|+.|++++|+++. +|..   ..+|+.|.+
T Consensus       294 N~l~-~lp~~---~~~L~~L~L~~N~L~~-l~~---~~~~L~~L~L~~N~L~~-lp~~---~~~L~~L~~  351 (353)
T d1jl5a_         294 NKLI-ELPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLRE-FPDI---PESVEDLRM  351 (353)
T ss_dssp             SCCS-CCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCCC---CTTCCEEEC
T ss_pred             CccC-ccccc---cCCCCEEECCCCcCCc-ccc---ccCCCCEEECcCCcCCC-CCcc---ccccCeeEC
Confidence            5554 23332   3456666666666653 332   23466677777777663 3432   234555554


No 74 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78  E-value=4.6e-17  Score=179.12  Aligned_cols=96  Identities=28%  Similarity=0.313  Sum_probs=53.7

Q ss_pred             CCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccC
Q 002105          110 NSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLAS  189 (966)
Q Consensus       110 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~  189 (966)
                      .+|++|||++|.++. +| ..+++|++|+|++|+|+ .+|+.   +.+|+.|++++|.++. ++. +  .+.|++|++++
T Consensus        38 ~~l~~LdLs~~~L~~-lp-~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~-l--p~~L~~L~L~~  107 (353)
T d1jl5a_          38 RQAHELELNNLGLSS-LP-ELPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD-L--PPLLEYLGVSN  107 (353)
T ss_dssp             HTCSEEECTTSCCSC-CC-SCCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS-C--CTTCCEEECCS
T ss_pred             cCCCEEEeCCCCCCC-CC-CCCCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh-h--ccccccccccc
Confidence            457788888877764 33 23467777777777776 45544   3456677777776542 221 0  12355555555


Q ss_pred             CCCcccCCcccccCCcceEEEccCCCCC
Q 002105          190 NQLIGSIPREIGQLRNLKWIYLGYNNLS  217 (966)
Q Consensus       190 n~l~~~~p~~l~~l~~L~~L~L~~N~l~  217 (966)
                      |.+.. +|. ++.+++|++|++++|.+.
T Consensus       108 n~l~~-lp~-~~~l~~L~~L~l~~~~~~  133 (353)
T d1jl5a_         108 NQLEK-LPE-LQNSSFLKIIDVDNNSLK  133 (353)
T ss_dssp             SCCSS-CCC-CTTCTTCCEEECCSSCCS
T ss_pred             ccccc-ccc-hhhhccceeecccccccc
Confidence            55542 332 344555555555555443


No 75 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.73  E-value=2.9e-19  Score=178.85  Aligned_cols=159  Identities=16%  Similarity=0.065  Sum_probs=111.4

Q ss_pred             cCCCCCccEEEEEEEecCCcEEEEEEEeccCcc----------cc--------cchHHHHHHHHhhcCCCceeEEeeEEe
Q 002105          690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVNTI----------TT--------SSFWPDVSQFGKLIMHPNIVRLHGVCR  751 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~~~----------~~--------~~~~~e~~~~~~~~~H~niv~l~g~~~  751 (966)
                      .+|+||+|.||+|+. .+|..||||.+......          ..        .....|...+.+ +.|+++++.+++..
T Consensus         7 ~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~v~~~~~~~~   84 (191)
T d1zara2           7 LMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK-LQGLAVPKVYAWEG   84 (191)
T ss_dssp             EEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH-TTTSSSCCEEEEET
T ss_pred             EeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHH-ccCCCcceEEEecC
Confidence            468999999999997 78999999976421100          00        112234455555 68999999887642


Q ss_pred             cCCeeEEEEEccCCCCHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCCCeEeecCCCCcEEEcCCCCceEEEeccccce
Q 002105          752 SEKAAYLVYEYIEGKELSEVLRNLSWERRRKVAIGIAKALRFLHFHCSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLAY  831 (966)
Q Consensus       752 ~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~l~yLH~~~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~~  831 (966)
                          .++||||++++.+.    .+++....+++.|+++|++|||   ..+|+||||||+|||++++   .+++.|||.+.
T Consensus        85 ----~~lvme~~~~~~~~----~l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~---~~~liDFG~a~  150 (191)
T d1zara2          85 ----NAVLMELIDAKELY----RVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE---GIWIIDFPQSV  150 (191)
T ss_dssp             ----TEEEEECCCCEEGG----GCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT---EEEECCCTTCE
T ss_pred             ----CEEEEEeecccccc----chhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC---CEEEEECCCcc
Confidence                37999999987654    3566667789999999999999   4599999999999999853   46788999886


Q ss_pred             ecCCCCcCCcccccc------cccCCCCCCCcchHHHHHHHH
Q 002105          832 CTDSKSINSSAYVAP------ETKESKDITEKGDIYGFGLIL  867 (966)
Q Consensus       832 ~~~~~~~~~~~y~aP------E~~~~~~~~~~~Dv~S~Gv~l  867 (966)
                      .......  ..|...      |.+ .+.|+.++|+||..--+
T Consensus       151 ~~~~~~~--~~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         151 EVGEEGW--REILERDVRNIITYF-SRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ETTSTTH--HHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred             cCCCCCc--HHHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence            5432211  112211      111 35678899999975433


No 76 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72  E-value=2.6e-17  Score=169.45  Aligned_cols=187  Identities=26%  Similarity=0.384  Sum_probs=94.4

Q ss_pred             CCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEE
Q 002105           83 HLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLD  162 (966)
Q Consensus        83 ~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~  162 (966)
                      .+.+|+.|++++|+|+ .++.  +..+++|++|++++|.+++..|+..+++|++|++++|.++. + +.+..+++|++++
T Consensus        39 ~l~~L~~L~l~~~~i~-~l~~--l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~-i-~~l~~l~~L~~l~  113 (227)
T d1h6ua2          39 DLDGITTLSAFGTGVT-TIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLD  113 (227)
T ss_dssp             HHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEE
T ss_pred             HcCCcCEEECCCCCCC-cchh--HhcCCCCcEeecCCceeeccccccccccccccccccccccc-c-ccccccccccccc
Confidence            3445555555555554 3421  33445555555555555544444555555555555554442 2 1244444444444


Q ss_pred             ccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccc
Q 002105          163 LGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTG  242 (966)
Q Consensus       163 L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~  242 (966)
                      ++++                        ...+.  ..+...+.++.+.++.+.+...  ..+..+++|++|++++|.+..
T Consensus       114 l~~~------------------------~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~  165 (227)
T d1h6ua2         114 LTST------------------------QITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD  165 (227)
T ss_dssp             CTTS------------------------CCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCC
T ss_pred             cccc------------------------ccccc--chhccccchhhhhchhhhhchh--hhhcccccccccccccccccc
Confidence            4444                        43321  1233444555555555554321  224455556666666655543


Q ss_pred             cCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceeccc
Q 002105          243 QIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLF  308 (966)
Q Consensus       243 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~  308 (966)
                      .  ..++++++|++|+|++|++++ ++ .+.++++|++|++++|++++..  .+.++++|+.|+++
T Consensus       166 ~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~ls  225 (227)
T d1h6ua2         166 L--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT  225 (227)
T ss_dssp             C--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred             c--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEee
Confidence            2  225556666666666666653 22 2556666666666666665432  25566666666664


No 77 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71  E-value=2.4e-17  Score=169.68  Aligned_cols=203  Identities=23%  Similarity=0.328  Sum_probs=118.6

Q ss_pred             EEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCc
Q 002105          114 FLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLI  193 (966)
Q Consensus       114 ~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~  193 (966)
                      .++++.+.+++..+...+.+|++|++++|.++. + +.+..+++|++|++++|.+.+..|  +..+++|+++++++|.++
T Consensus        23 ~~~l~~~~~~d~~~~~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~   98 (227)
T d1h6ua2          23 KIAAGKSNVTDTVTQADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK   98 (227)
T ss_dssp             HHHTTCSSTTSEECHHHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred             HHHhCCCCcCCcCCHHHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc
Confidence            345555555555444556677777777777764 3 346777777777777777765433  667777777777777665


Q ss_pred             ccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhh
Q 002105          194 GSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSIL  273 (966)
Q Consensus       194 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~  273 (966)
                      . + ..+..+++|+.++++++...+.  ..+...+.++.+.++.+.+...  ..+.++++|++|++++|.+...  ..+.
T Consensus        99 ~-i-~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~  170 (227)
T d1h6ua2          99 N-V-SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLA  170 (227)
T ss_dssp             C-C-GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGT
T ss_pred             c-c-cccccccccccccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccc--hhhc
Confidence            3 2 2466677777777777665432  2345556666666666655432  2345556666666666665432  2255


Q ss_pred             cCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCCCCCCCCccEEEcc
Q 002105          274 GLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSSLASMPKLQVLQLW  332 (966)
Q Consensus       274 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~  332 (966)
                      ++++|+.|++++|++++. + .+..+++|++|++++|++++..  .+.++++|+.|+++
T Consensus       171 ~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~ls  225 (227)
T d1h6ua2         171 NLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT  225 (227)
T ss_dssp             TCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred             ccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEee
Confidence            566666666666665532 2 2455555555555555555322  14455555555554


No 78 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70  E-value=4.7e-17  Score=169.28  Aligned_cols=85  Identities=18%  Similarity=0.248  Sum_probs=40.4

Q ss_pred             CCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCC-cCCCCCCCCCEEEccC-CCCcccCCcccccCCcceEEE
Q 002105          133 RLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIP-LSISNITSLQIFTLAS-NQLIGSIPREIGQLRNLKWIY  210 (966)
Q Consensus       133 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~  210 (966)
                      ++++|||++|+++...+..|.++++|++|++++|.+...+| ..|.+++.++++.+.. |.+....+..|..+++|++++
T Consensus        30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~  109 (242)
T d1xwdc1          30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL  109 (242)
T ss_dssp             CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred             CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence            34444555555543333445555555555555555443322 2344455555554432 344444444444555555555


Q ss_pred             ccCCCCC
Q 002105          211 LGYNNLS  217 (966)
Q Consensus       211 L~~N~l~  217 (966)
                      +++|.+.
T Consensus       110 l~~~~l~  116 (242)
T d1xwdc1         110 ISNTGIK  116 (242)
T ss_dssp             EESCCCC
T ss_pred             cchhhhc
Confidence            5555443


No 79 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69  E-value=2e-16  Score=164.40  Aligned_cols=199  Identities=15%  Similarity=0.088  Sum_probs=102.5

Q ss_pred             CCCEEEeecccccccCCcCCCCCCccceEeccccccCCCC-ChhhhcCCCCCEEEcc-CCcCcccCchhhcCCCCCceec
Q 002105          229 SLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSI-PKSILGLKSLVSFDLS-DNYLSGEIPEEVIQLQNLEILH  306 (966)
Q Consensus       229 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls-~N~l~~~~p~~~~~l~~L~~L~  306 (966)
                      ++++|++++|+++...+..|.++++|++|++++|.+...+ +..|.+++.++++++. .|.+....+..|..+++|+.|+
T Consensus        30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~  109 (242)
T d1xwdc1          30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL  109 (242)
T ss_dssp             CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred             CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence            4555555555555433344555555555555555544322 2334555555555543 2444444445555555566666


Q ss_pred             ccCCCCCCCCC-CCCCCCCCccEEEccCCcCcccCCccccCCC-CCcEEEccCCcccccCCCCccCCCCccEE-EccCCC
Q 002105          307 LFSNNFTGKIP-SSLASMPKLQVLQLWSNQFSGEIPSNLGKQN-NLTVIDLSTNFLTGKIPETLCDSGSLFKL-ILFSNS  383 (966)
Q Consensus       307 L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L-~l~~N~  383 (966)
                      +++|.+....+ ..+..+..+..+...++.+....+..+..++ .+..+++++|.++...+..+ ...++..+ .+++|+
T Consensus       110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~  188 (242)
T d1xwdc1         110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLSDNNN  188 (242)
T ss_dssp             EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECTTCTT
T ss_pred             cchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccc-cchhhhccccccccc
Confidence            65555543221 1223344454555555555544444444432 56666666666664333332 33333333 345555


Q ss_pred             CCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEccc
Q 002105          384 LEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDIS  428 (966)
Q Consensus       384 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs  428 (966)
                      ++...+..|.++++|++|+|++|+|+...+..|.+++.|+++++.
T Consensus       189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~  233 (242)
T d1xwdc1         189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY  233 (242)
T ss_dssp             CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEE
T ss_pred             cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCC
Confidence            654444456666667777776666665555556666666665554


No 80 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68  E-value=1.4e-16  Score=161.58  Aligned_cols=179  Identities=23%  Similarity=0.372  Sum_probs=107.0

Q ss_pred             EcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcc
Q 002105           91 NLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVG  170 (966)
Q Consensus        91 ~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~  170 (966)
                      ++..+.+.+.++..   .+.+|++|++++|.++...++..+++|++|+|++|++++. + .++.+++|++|++++|++++
T Consensus        30 ~l~~~~~~~~~~~~---~L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~  104 (210)
T d1h6ta2          30 NLKKKSVTDAVTQN---ELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD  104 (210)
T ss_dssp             HTTCSCTTSEECHH---HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred             HhCcCccCCccCHH---HhcCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc
Confidence            44455555444432   1245666666666665544445566666666666666542 2 24566666666666666653


Q ss_pred             cCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCC
Q 002105          171 EIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGN  250 (966)
Q Consensus       171 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~  250 (966)
                       +| .+.++++|+.|++++|.+..  ...+..+++|+.+++++|.+++  +..+..+++|+++++++|++++ ++ .+.+
T Consensus       105 -l~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~  176 (210)
T d1h6ta2         105 -LS-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IV-PLAG  176 (210)
T ss_dssp             -GG-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CG-GGTT
T ss_pred             -cc-cccccccccccccccccccc--cccccccccccccccccccccc--cccccccccccccccccccccc-cc-cccC
Confidence             33 35666666666666666542  2345666677777777776653  2345666777777777777764 22 2667


Q ss_pred             CCccceEeccccccCCCCChhhhcCCCCCEEEcc
Q 002105          251 LSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLS  284 (966)
Q Consensus       251 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls  284 (966)
                      +++|++|+|++|+++. +| .+.++++|++|+|+
T Consensus       177 l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls  208 (210)
T d1h6ta2         177 LTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF  208 (210)
T ss_dssp             CTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred             CCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence            7777777777777763 33 46777777777765


No 81 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67  E-value=2.4e-16  Score=159.80  Aligned_cols=179  Identities=26%  Similarity=0.356  Sum_probs=99.9

Q ss_pred             ECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCccc
Q 002105          116 NLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGS  195 (966)
Q Consensus       116 ~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~  195 (966)
                      +++.+.+++.++...+.+|++|++++|.++.. + .+..+++|++|+|++|.+++..  .++++++|++|++++|++++ 
T Consensus        30 ~l~~~~~~~~~~~~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-  104 (210)
T d1h6ta2          30 NLKKKSVTDAVTQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-  104 (210)
T ss_dssp             HTTCSCTTSEECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-
T ss_pred             HhCcCccCCccCHHHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-
Confidence            45555555544444455666666666666532 2 2555666666666666665432  24556666666666666653 


Q ss_pred             CCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcC
Q 002105          196 IPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGL  275 (966)
Q Consensus       196 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l  275 (966)
                      +| .+..+++|+.|++++|.+..  ...+..+++++.+++++|.+++  +..+..+++|+++++++|++++. + .+.++
T Consensus       105 l~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l  177 (210)
T d1h6ta2         105 LS-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-PLAGL  177 (210)
T ss_dssp             GG-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-GGTTC
T ss_pred             cc-cccccccccccccccccccc--cccccccccccccccccccccc--ccccccccccccccccccccccc-c-cccCC
Confidence            22 35556666666666665542  2345556666666666666553  23345566666666666666542 2 25566


Q ss_pred             CCCCEEEccCCcCcccCchhhcCCCCCceeccc
Q 002105          276 KSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLF  308 (966)
Q Consensus       276 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~  308 (966)
                      ++|++|++++|.++. +| .+..+++|++|+|+
T Consensus       178 ~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls  208 (210)
T d1h6ta2         178 TKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF  208 (210)
T ss_dssp             TTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred             CCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence            666666666666653 33 35566666666654


No 82 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67  E-value=1.5e-19  Score=206.93  Aligned_cols=374  Identities=21%  Similarity=0.149  Sum_probs=230.7

Q ss_pred             CcceEEEccCCCCCCCC-CcCccCCCCCCEEEeecccccc----cCCcCCCCCCccceEeccccccCCCC----Chhhh-
Q 002105          204 RNLKWIYLGYNNLSGEI-PKEIGDLTSLNHLDLVYNNLTG----QIPPSFGNLSNLRYLFLYQNKLTGSI----PKSIL-  273 (966)
Q Consensus       204 ~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~----p~~l~-  273 (966)
                      .+|+.||+++|++++.. .+-+..++++++|+|++|.++.    .++..+..+++|++|+|++|+++..-    ...+. 
T Consensus         2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~   81 (460)
T d1z7xw1           2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT   81 (460)
T ss_dssp             EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred             CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence            36889999999987421 2335667888999999998763    23445677888999999998875211    11121 


Q ss_pred             cCCCCCEEEccCCcCccc----CchhhcCCCCCceecccCCCCCCCCCCC----C-CCCCCccEEEccCCcCcccC----
Q 002105          274 GLKSLVSFDLSDNYLSGE----IPEEVIQLQNLEILHLFSNNFTGKIPSS----L-ASMPKLQVLQLWSNQFSGEI----  340 (966)
Q Consensus       274 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~----l-~~l~~L~~L~L~~N~l~~~~----  340 (966)
                      ...+|++|+|++|.++..    ++..+..+++|++|++++|.++......    + ...............+....    
T Consensus        82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  161 (460)
T d1z7xw1          82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL  161 (460)
T ss_dssp             TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred             CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccc
Confidence            224789999999988754    3455667888999999888775321100    0 11112233333333322110    


Q ss_pred             CccccCCCCCcEEEccCCcccccC----CCCc-cCCCCccEEEccCCCCCCCC----CCccccCccCceeeccccccCCc
Q 002105          341 PSNLGKQNNLTVIDLSTNFLTGKI----PETL-CDSGSLFKLILFSNSLEGKI----PNSLSTCKSLRRVRLQNNRLSGE  411 (966)
Q Consensus       341 p~~~~~~~~L~~L~Ls~N~l~~~~----p~~~-~~~~~L~~L~l~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~  411 (966)
                      -..+.....++.++++++......    ...+ ........+.+..+.+....    ...+...+.++.+++++|++...
T Consensus       162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~  241 (460)
T d1z7xw1         162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV  241 (460)
T ss_dssp             HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhcccccc
Confidence            112234567778888877654210    0000 11223456666666543211    12234567788899988876432


Q ss_pred             -----CChhhcCCCcccEEcccCCCCCCcc----CcchhccCCCcEecCCCCcCCccCCC------CcCccccccccccc
Q 002105          412 -----LSSEFTRLPLVYFLDISGNDLSGRI----GEQKWEMTSLQMLNLAGNNFSGKLPD------SFGSDQLENLDLSE  476 (966)
Q Consensus       412 -----~~~~~~~l~~L~~LdLs~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~p~------~~~~~~L~~L~Ls~  476 (966)
                           .+..+.....++.+++++|.+....    ...+...+.++.+++++|.++.....      ......|+.+++++
T Consensus       242 ~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~  321 (460)
T d1z7xw1         242 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS  321 (460)
T ss_dssp             HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred             ccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence                 2334456778899999999887432    22345578889999999988642111      01235688888988


Q ss_pred             ccccccCCC----cccCcCCCCEEEccCCccCCC----Chhhcc-ccccccccccCCceeccc----cCccCCCCCCCcE
Q 002105          477 NRFSGTIPR----SFGRLSELMQLKISRNKLFGD----IPEELS-SCKKLVSLDLSNNQLSGH----IPASLSEMPVLGQ  543 (966)
Q Consensus       477 N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~----~p~~~~-~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~  543 (966)
                      |.++.....    .+....+|++|+|++|++...    ++..+. ..+.|++|+|++|.|+..    ++..+...++|+.
T Consensus       322 ~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~  401 (460)
T d1z7xw1         322 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE  401 (460)
T ss_dssp             SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred             cchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCE
Confidence            888754322    234556889999999988643    333333 456789999999988753    4455666788999


Q ss_pred             EeCCCCcCcccCCccc----c-cCCCCCeeeCcCCcccc
Q 002105          544 LDLSENQLSGKIPQTL----G-RVASLVQVNISHNHFHG  577 (966)
Q Consensus       544 LdLs~N~l~g~~p~~l----~-~l~~L~~l~ls~N~l~g  577 (966)
                      |||++|+|+......+    . +...|+.+++.+|.+..
T Consensus       402 L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~  440 (460)
T d1z7xw1         402 LDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE  440 (460)
T ss_dssp             EECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred             EECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence            9999998875433222    2 33468889998888764


No 83 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66  E-value=2.9e-16  Score=157.84  Aligned_cols=127  Identities=28%  Similarity=0.417  Sum_probs=52.8

Q ss_pred             CCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCE
Q 002105          153 GSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNH  232 (966)
Q Consensus       153 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~  232 (966)
                      ..+++|++|++++|++++..|  ++++++|++|++++|.+.. ++ .+.++++|+.|++++|.+...  ..+..+++|+.
T Consensus        59 ~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~  132 (199)
T d2omxa2          59 EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNR  132 (199)
T ss_dssp             GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred             ccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHH
Confidence            334444444444444433221  3444444444444444332 11 234444444444444443321  22344444444


Q ss_pred             EEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcCCCCCEEEccCCcCc
Q 002105          233 LDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGLKSLVSFDLSDNYLS  289 (966)
Q Consensus       233 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~  289 (966)
                      |++++|++.. + +.+..+++|++|++.+|++++.  ..+.++++|++|++++|+++
T Consensus       133 L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~  185 (199)
T d2omxa2         133 LELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVS  185 (199)
T ss_dssp             EECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred             hhhhhhhhcc-c-ccccccccccccccccccccCC--ccccCCCCCCEEECCCCCCC
Confidence            4444444432 1 2244444445555544444432  12444444444444444444


No 84 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.66  E-value=8.5e-17  Score=160.81  Aligned_cols=127  Identities=19%  Similarity=0.270  Sum_probs=56.3

Q ss_pred             ceecccCCCCCCCCCCCCCCCCCccEEEccCCcCcccC-CccccCCCCCcEEEccCCcccccCCCCccCCCCccEEEccC
Q 002105          303 EILHLFSNNFTGKIPSSLASMPKLQVLQLWSNQFSGEI-PSNLGKQNNLTVIDLSTNFLTGKIPETLCDSGSLFKLILFS  381 (966)
Q Consensus       303 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~  381 (966)
                      +.++.++++++ .+|..+.  +++++|+|++|++++.+ +..|..+++|+.|+|++|.+.+..+..+..+.+|+.|++++
T Consensus        11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_          11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            34555555555 3343331  34555555555554322 23344455555555555555444444444444444444444


Q ss_pred             CCCCCCCCCccccCccCceeeccccccCCcCChhhcCCCcccEEcccCCCC
Q 002105          382 NSLEGKIPNSLSTCKSLRRVRLQNNRLSGELSSEFTRLPLVYFLDISGNDL  432 (966)
Q Consensus       382 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~LdLs~N~l  432 (966)
                      |+++...|.+|.++++|++|+|++|+|++..+.+|..+++|++|+|++|.+
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~  138 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF  138 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred             ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccccc
Confidence            444443344444444444444444444443343444444444444333333


No 85 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66  E-value=8.5e-16  Score=154.36  Aligned_cols=160  Identities=26%  Similarity=0.354  Sum_probs=92.7

Q ss_pred             CCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccC
Q 002105          110 NSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLAS  189 (966)
Q Consensus       110 ~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~  189 (966)
                      .+|++|++++|.++....+..+++|++|+|++|++++..|  ++++++|++|++++|.+... + .+.++++|+.|++++
T Consensus        40 ~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L~l~~  115 (199)
T d2omxa2          40 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTLFN  115 (199)
T ss_dssp             TTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEEECCS
T ss_pred             cCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc--ccCCcccccccccccccccc-c-ccccccccccccccc
Confidence            4555555555555433233445556666666665554322  55666666666666655432 2 255666666666666


Q ss_pred             CCCcccCCcccccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC
Q 002105          190 NQLIGSIPREIGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP  269 (966)
Q Consensus       190 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p  269 (966)
                      |.....  ..+..+++|+.|++++|.+.. + +.+..+++|++|++++|++++. + .++++++|++|++++|+++. ++
T Consensus       116 ~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-i~  188 (199)
T d2omxa2         116 NQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-IS  188 (199)
T ss_dssp             SCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG
T ss_pred             cccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCC-Cc
Confidence            655432  235566666777777666652 2 3466667777777777776643 2 36677777777777777764 22


Q ss_pred             hhhhcCCCCCEE
Q 002105          270 KSILGLKSLVSF  281 (966)
Q Consensus       270 ~~l~~l~~L~~L  281 (966)
                       .+..+++|++|
T Consensus       189 -~l~~L~~L~~L  199 (199)
T d2omxa2         189 -VLAKLTNLESL  199 (199)
T ss_dssp             -GGGGCTTCSEE
T ss_pred             -cccCCCCCCcC
Confidence             46666666654


No 86 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.65  E-value=2.3e-16  Score=157.57  Aligned_cols=128  Identities=26%  Similarity=0.275  Sum_probs=66.3

Q ss_pred             cEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccC-CcCCCCCCCCCEEEccCCCCcccCCcccccCCcceEEEccC
Q 002105          135 EILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEI-PLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKWIYLGY  213 (966)
Q Consensus       135 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~  213 (966)
                      +++|.++++++ .+|..+.  +++++|+|++|.+++.+ +..|.++++|+.|++++|.+.+..+..+..+++|++|+|++
T Consensus        11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_          11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            34455555554 3443332  34555555555554322 33344555555555555555555555555555555555555


Q ss_pred             CCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccC
Q 002105          214 NNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLT  265 (966)
Q Consensus       214 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~  265 (966)
                      |+++...|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~  139 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN  139 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred             ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence            5555444445555555555555555555555555555555555555555554


No 87 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65  E-value=6.1e-19  Score=201.73  Aligned_cols=106  Identities=20%  Similarity=0.358  Sum_probs=55.5

Q ss_pred             CEEEEEcCCCCccccc-cccccCCCCCCEEEcCCCCCcc----ccChhhhhcCCCCcEEECCCCCCCCC----CC--C-C
Q 002105           62 HVNAIELSAKNISGKI-SSSIFHLPHVESINLSSNQLSG----EIPSDIFSSSNSLRFLNLSNNNFTGP----VP--I-G  129 (966)
Q Consensus        62 ~v~~L~L~~~~l~~~~-~~~~~~l~~L~~L~Ls~N~l~g----~ip~~~~~~l~~L~~L~Ls~N~l~~~----~~--~-~  129 (966)
                      .++.||++++++++.. ..-+..++++++|+|++|.++.    .|. .++..+++|++|||++|.|+..    +.  + .
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~-~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~   81 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDIS-SALRVNPALAELNLRSNELGDVGVHCVLQGLQT   81 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHH-HHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHH-HHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence            4667777777776532 2234456677777777776652    111 2234456677777776666420    00  0 1


Q ss_pred             CCCCCcEEeCCCCCCCCc----CCCCcCCCCCcCEEEccCCCC
Q 002105          130 SLSRLEILDLSNNMLSGK----IPEEIGSFSGLKVLDLGGNVL  168 (966)
Q Consensus       130 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l  168 (966)
                      ...+|++|+|++|.++..    ++..+..+++|++|+|++|.+
T Consensus        82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i  124 (460)
T d1z7xw1          82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL  124 (460)
T ss_dssp             TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred             CCCCCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence            223466666666655432    233344555555555555544


No 88 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47  E-value=3.1e-15  Score=159.10  Aligned_cols=125  Identities=17%  Similarity=0.236  Sum_probs=64.4

Q ss_pred             CEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCC-CCCCCCCcEEeCCCCCCCCc-CCCCcCCCCCcCEEEccC
Q 002105           88 ESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVP-IGSLSRLEILDLSNNMLSGK-IPEEIGSFSGLKVLDLGG  165 (966)
Q Consensus        88 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~  165 (966)
                      ++|||+++.+.+.+...+..  ..+..+.++...+..+.. .....+|++|||+++.++.. ++..+.++++|++|+|++
T Consensus         3 ~~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~   80 (284)
T d2astb2           3 QTLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG   80 (284)
T ss_dssp             SEEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred             CEEECCCCCCCchHHHHHHh--ccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence            35677766654333333332  234556665554443221 23445667777776665532 233455666666666666


Q ss_pred             CCCcccCCcCCCCCCCCCEEEccCC-CCccc-CCcccccCCcceEEEccCC
Q 002105          166 NVLVGEIPLSISNITSLQIFTLASN-QLIGS-IPREIGQLRNLKWIYLGYN  214 (966)
Q Consensus       166 N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~L~~N  214 (966)
                      +.+....+..++.+++|++|+++++ .++.. +..-+..+++|++|+++++
T Consensus        81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c  131 (284)
T d2astb2          81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC  131 (284)
T ss_dssp             CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred             cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccc
Confidence            6665555555566666666666664 23211 1111234555555555553


No 89 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45  E-value=4.8e-14  Score=135.75  Aligned_cols=113  Identities=17%  Similarity=0.156  Sum_probs=76.1

Q ss_pred             ccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCc
Q 002105           79 SSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGL  158 (966)
Q Consensus        79 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L  158 (966)
                      +.+.+...++.|||++|+|+ .||. .+..+++|++|||++|.|+....+..+++|++|++++|+++...+..+..+++|
T Consensus        12 ~~~~n~~~lr~L~L~~n~I~-~i~~-~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L   89 (162)
T d1a9na_          12 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL   89 (162)
T ss_dssp             CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred             HhccCcCcCcEEECCCCCCC-ccCc-cccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccCCCcccccccccc
Confidence            45667778899999999987 6763 556668888888888888754445667777777777777775544445567777


Q ss_pred             CEEEccCCCCcccCC-cCCCCCCCCCEEEccCCCCc
Q 002105          159 KVLDLGGNVLVGEIP-LSISNITSLQIFTLASNQLI  193 (966)
Q Consensus       159 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~  193 (966)
                      ++|++++|.+..... ..+..+++|++|++++|.++
T Consensus        90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~  125 (162)
T d1a9na_          90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT  125 (162)
T ss_dssp             CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred             ccceeccccccccccccccccccccchhhcCCCccc
Confidence            777777776653211 23455555666666555554


No 90 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40  E-value=1.5e-14  Score=153.71  Aligned_cols=219  Identities=18%  Similarity=0.211  Sum_probs=131.2

Q ss_pred             EEEcCCCCccccccccccCCCCCCEEEcCCCCCccccChhhhhcCCCCcEEECCCCCCCCCC---CCCCCCCCcEEeCCC
Q 002105           65 AIELSAKNISGKISSSIFHLPHVESINLSSNQLSGEIPSDIFSSSNSLRFLNLSNNNFTGPV---PIGSLSRLEILDLSN  141 (966)
Q Consensus        65 ~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~~~~---~~~~l~~L~~L~Ls~  141 (966)
                      .+||+++.+.......+.. ..+..+.++...+...+. ..+ ...+|++|||+++.++...   .+..+++|++|+|++
T Consensus         4 ~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~-~~~-~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~   80 (284)
T d2astb2           4 TLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLA-EHF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG   80 (284)
T ss_dssp             EEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCC-SCC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred             EEECCCCCCCchHHHHHHh-ccceEeeccccccccchh-hhc-cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence            5677777665332222211 234566666555442221 222 2357888888888776421   146778888888888


Q ss_pred             CCCCCcCCCCcCCCCCcCEEEccCC-CCccc-CCcCCCCCCCCCEEEccCCC-Ccc-cCCccccc-CCcceEEEccCC--
Q 002105          142 NMLSGKIPEEIGSFSGLKVLDLGGN-VLVGE-IPLSISNITSLQIFTLASNQ-LIG-SIPREIGQ-LRNLKWIYLGYN--  214 (966)
Q Consensus       142 N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~l~~-l~~L~~L~L~~N--  214 (966)
                      +.++...+..++.+++|++|+++++ .++.. +..-+.++++|++|+++++. ++. .+...+.. .++|+.|+++++  
T Consensus        81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~  160 (284)
T d2astb2          81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK  160 (284)
T ss_dssp             CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred             cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence            8887766777788888888888885 44321 12223467888888888753 332 12222333 357888888754  


Q ss_pred             CCCCC-CCcCccCCCCCCEEEeecc-cccccCCcCCCCCCccceEecccc-ccCCCCChhhhcCCCCCEEEccCC
Q 002105          215 NLSGE-IPKEIGDLTSLNHLDLVYN-NLTGQIPPSFGNLSNLRYLFLYQN-KLTGSIPKSILGLKSLVSFDLSDN  286 (966)
Q Consensus       215 ~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~Ls~N  286 (966)
                      .++.. +...+.++++|++|++++| .+++.....+.++++|++|++++| .++......++++++|+.|+++++
T Consensus       161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~  235 (284)
T d2astb2         161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI  235 (284)
T ss_dssp             GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred             ccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence            23211 1112345677777887765 456555666677777777777774 455444455666777777777765


No 91 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.40  E-value=3.2e-13  Score=123.53  Aligned_cols=100  Identities=27%  Similarity=0.357  Sum_probs=45.5

Q ss_pred             EEECCCCCCCCCCCCCCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCc
Q 002105          114 FLNLSNNNFTGPVPIGSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLI  193 (966)
Q Consensus       114 ~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~  193 (966)
                      +|+|++|+++...+++.+.+|++||+++|.++ .+|+.++.+++|++|++++|.++. +| .++++++|++|++++|++.
T Consensus         2 ~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i~   78 (124)
T d1dcea3           2 VLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQ   78 (124)
T ss_dssp             EEECTTSCCSSCCCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCC
T ss_pred             EEEcCCCCCCCCcccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCccC
Confidence            34444444443222344445555555555554 244445555555555555555543 22 2444555555555555444


Q ss_pred             ccC-CcccccCCcceEEEccCCCC
Q 002105          194 GSI-PREIGQLRNLKWIYLGYNNL  216 (966)
Q Consensus       194 ~~~-p~~l~~l~~L~~L~L~~N~l  216 (966)
                      ... ...++.+++|++|++++|.+
T Consensus        79 ~~~~~~~l~~~~~L~~L~l~~N~i  102 (124)
T d1dcea3          79 QSAAIQPLVSCPRLVLLNLQGNSL  102 (124)
T ss_dssp             SSSTTGGGGGCTTCCEEECTTSGG
T ss_pred             CCCCchhhcCCCCCCEEECCCCcC
Confidence            321 12344444444444444444


No 92 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39  E-value=1.1e-13  Score=133.32  Aligned_cols=110  Identities=18%  Similarity=0.147  Sum_probs=60.3

Q ss_pred             CCCCCCcEEeCCCCCCCCcCCCCcCCCCCcCEEEccCCCCcccCCcCCCCCCCCCEEEccCCCCcccCCcccccCCcceE
Q 002105          129 GSLSRLEILDLSNNMLSGKIPEEIGSFSGLKVLDLGGNVLVGEIPLSISNITSLQIFTLASNQLIGSIPREIGQLRNLKW  208 (966)
Q Consensus       129 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~  208 (966)
                      .++.+|++|||++|+|+. ++..+..+++|++|+|++|.++.. + .|..+++|++|++++|+++...+..+..+++|++
T Consensus        15 ~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l-~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~   91 (162)
T d1a9na_          15 TNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL-D-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE   91 (162)
T ss_dssp             ECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE-C-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred             cCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCcc-C-CcccCcchhhhhcccccccCCCcccccccccccc
Confidence            344556666666666653 355555666667777776666532 2 3556666666666666665444444445566666


Q ss_pred             EEccCCCCCCCCC-cCccCCCCCCEEEeeccccc
Q 002105          209 IYLGYNNLSGEIP-KEIGDLTSLNHLDLVYNNLT  241 (966)
Q Consensus       209 L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~  241 (966)
                      |++++|.++.... ..+..+++|++|++++|.++
T Consensus        92 L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~  125 (162)
T d1a9na_          92 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVT  125 (162)
T ss_dssp             EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred             ceeccccccccccccccccccccchhhcCCCccc
Confidence            6666665542111 23444455555555555443


No 93 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.32  E-value=3.8e-12  Score=116.21  Aligned_cols=87  Identities=28%  Similarity=0.383  Sum_probs=38.8

Q ss_pred             cccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCC-ChhhhcCCCC
Q 002105          200 IGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSI-PKSILGLKSL  278 (966)
Q Consensus       200 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L  278 (966)
                      ++.+++|++|++++|.++ .+|..++.+++|++|++++|.++. +| .+.++++|++|++++|+++... ...+..+++|
T Consensus        16 l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L   92 (124)
T d1dcea3          16 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL   92 (124)
T ss_dssp             GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred             cccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCccCCCCCchhhcCCCCC
Confidence            344444444444444443 234444444444444444444442 22 2444445555555555444321 1234444555


Q ss_pred             CEEEccCCcCc
Q 002105          279 VSFDLSDNYLS  289 (966)
Q Consensus       279 ~~L~Ls~N~l~  289 (966)
                      ++|++++|.++
T Consensus        93 ~~L~l~~N~i~  103 (124)
T d1dcea3          93 VLLNLQGNSLC  103 (124)
T ss_dssp             CEEECTTSGGG
T ss_pred             CEEECCCCcCC
Confidence            55555555443


No 94 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.31  E-value=8.2e-14  Score=152.54  Aligned_cols=242  Identities=19%  Similarity=0.252  Sum_probs=135.3

Q ss_pred             CCCCCCCCccEEEccCCcCccc----CCccccCCCCCcEEEccCCcccccC---CCCccCCCCccEEEccCCCCCCCCCC
Q 002105          318 SSLASMPKLQVLQLWSNQFSGE----IPSNLGKQNNLTVIDLSTNFLTGKI---PETLCDSGSLFKLILFSNSLEGKIPN  390 (966)
Q Consensus       318 ~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~~~~L~~L~Ls~N~l~~~~---p~~~~~~~~L~~L~l~~N~l~~~~p~  390 (966)
                      ..+....+|+.|+|++|.+...    +-..+...++|+.++++++......   |..+.                 .+..
T Consensus        25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~-----------------~l~~   87 (344)
T d2ca6a1          25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR-----------------LLLQ   87 (344)
T ss_dssp             HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH-----------------HHHH
T ss_pred             HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHH-----------------HHHH
Confidence            3445567788888888877432    2234556677778887766543211   10000                 0011


Q ss_pred             ccccCccCceeeccccccCCcC----ChhhcCCCcccEEcccCCCCCCccCcc-------------hhccCCCcEecCCC
Q 002105          391 SLSTCKSLRRVRLQNNRLSGEL----SSEFTRLPLVYFLDISGNDLSGRIGEQ-------------KWEMTSLQMLNLAG  453 (966)
Q Consensus       391 ~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~LdLs~N~l~~~~~~~-------------~~~l~~L~~L~Ls~  453 (966)
                      .+..+++|+.|+|++|.++...    ...+...++|+.|++++|.+.......             ....+.|+.+++++
T Consensus        88 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~  167 (344)
T d2ca6a1          88 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR  167 (344)
T ss_dssp             HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred             HHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccc
Confidence            1223444555555555544321    222334455555555555543210000             11244566666666


Q ss_pred             CcCCccCCC-----CcCccccccccccccccccc-----CCCcccCcCCCCEEEccCCccCCC----Chhhccccccccc
Q 002105          454 NNFSGKLPD-----SFGSDQLENLDLSENRFSGT-----IPRSFGRLSELMQLKISRNKLFGD----IPEELSSCKKLVS  519 (966)
Q Consensus       454 N~l~~~~p~-----~~~~~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~  519 (966)
                      |+++...-.     ......|+.|+|++|.++..     +...+..+++|+.|+|++|.++..    +...+..+++|++
T Consensus       168 n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~  247 (344)
T d2ca6a1         168 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE  247 (344)
T ss_dssp             SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred             ccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchh
Confidence            665422111     11234567777777766531     334566778888888888887532    3455677888888


Q ss_pred             cccCCceeccccCcc----CC--CCCCCcEEeCCCCcCccc----CCcccc-cCCCCCeeeCcCCccc
Q 002105          520 LDLSNNQLSGHIPAS----LS--EMPVLGQLDLSENQLSGK----IPQTLG-RVASLVQVNISHNHFH  576 (966)
Q Consensus       520 L~Ls~N~l~~~~p~~----l~--~l~~L~~LdLs~N~l~g~----~p~~l~-~l~~L~~l~ls~N~l~  576 (966)
                      |+|++|.|++.-...    +.  ..+.|+.||+++|+++..    +...+. +.+.|+.|++++|.+.
T Consensus       248 L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~  315 (344)
T d2ca6a1         248 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS  315 (344)
T ss_dssp             EECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred             hhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence            999998887542222    22  235789999999998753    223332 5678999999999885


No 95 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.30  E-value=1.2e-13  Score=151.25  Aligned_cols=90  Identities=21%  Similarity=0.243  Sum_probs=44.8

Q ss_pred             ccccCCCCCCEEEcCCCCCccccCh---hhhhcCCCCcEEECCCCCCCCCC---C---------CCCCCCCcEEeCCCCC
Q 002105           79 SSIFHLPHVESINLSSNQLSGEIPS---DIFSSSNSLRFLNLSNNNFTGPV---P---------IGSLSRLEILDLSNNM  143 (966)
Q Consensus        79 ~~~~~l~~L~~L~Ls~N~l~g~ip~---~~~~~l~~L~~L~Ls~N~l~~~~---~---------~~~l~~L~~L~Ls~N~  143 (966)
                      .++.....|+.|+|++|.|...-..   ..+...++|+.|+++++.+....   +         +..+++|++|||++|.
T Consensus        25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~  104 (344)
T d2ca6a1          25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA  104 (344)
T ss_dssp             HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred             HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence            3455566777777777766421111   12233466666666665443210   0         1344556666666666


Q ss_pred             CCCc----CCCCcCCCCCcCEEEccCCCC
Q 002105          144 LSGK----IPEEIGSFSGLKVLDLGGNVL  168 (966)
Q Consensus       144 l~~~----~p~~~~~l~~L~~L~L~~N~l  168 (966)
                      +...    +...+...++|++|++++|.+
T Consensus       105 i~~~~~~~l~~~l~~~~~L~~L~l~~n~l  133 (344)
T d2ca6a1         105 FGPTAQEPLIDFLSKHTPLEHLYLHNNGL  133 (344)
T ss_dssp             CCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred             cccccccchhhhhcccccchheecccccc
Confidence            5432    122233445555666655544


No 96 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18  E-value=3.5e-11  Score=114.57  Aligned_cols=109  Identities=22%  Similarity=0.188  Sum_probs=85.0

Q ss_pred             cccccccccccccccCCCcccCcCCCCEEEccCCc-cCCCChhhccccccccccccCCceeccccCccCCCCCCCcEEeC
Q 002105          468 QLENLDLSENRFSGTIPRSFGRLSELMQLKISRNK-LFGDIPEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDL  546 (966)
Q Consensus       468 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdL  546 (966)
                      ..+.++.+++.+. ..|..+..+++|++|++++|+ ++...+..|.++++|+.|+|++|+|+...|..|..+++|+.|||
T Consensus         9 ~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L   87 (156)
T d2ifga3           9 GSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL   87 (156)
T ss_dssp             SSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred             CCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence            3455666776665 456677788888888887664 77767778888999999999999998877888888999999999


Q ss_pred             CCCcCcccCCcccccCCCCCeeeCcCCccccc
Q 002105          547 SENQLSGKIPQTLGRVASLVQVNISHNHFHGS  578 (966)
Q Consensus       547 s~N~l~g~~p~~l~~l~~L~~l~ls~N~l~g~  578 (966)
                      ++|+|+...+..|..+ .|+.|+|++|+|.+.
T Consensus        88 s~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C~  118 (156)
T d2ifga3          88 SFNALESLSWKTVQGL-SLQELVLSGNPLHCS  118 (156)
T ss_dssp             CSSCCSCCCSTTTCSC-CCCEEECCSSCCCCC
T ss_pred             cCCCCcccChhhhccc-cccccccCCCcccCC
Confidence            9999986555555544 688999999988754


No 97 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.10  E-value=1e-12  Score=130.88  Aligned_cols=125  Identities=22%  Similarity=0.271  Sum_probs=67.9

Q ss_pred             hccCCCcEecCCCCcCCccCCCCcCcccccccccccccccccCCCcccCcCCCCEEEccCCccCCCChhhcccccccccc
Q 002105          441 WEMTSLQMLNLAGNNFSGKLPDSFGSDQLENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDIPEELSSCKKLVSL  520 (966)
Q Consensus       441 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L  520 (966)
                      ..+++|++|+|++|+|+. ++.+.++++|++|+|++|+++ .+|..+..+++|+.|++++|+++. + ..+..+++|+.|
T Consensus        45 ~~L~~L~~L~Ls~n~I~~-i~~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L  120 (198)
T d1m9la_          45 STLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVL  120 (198)
T ss_dssp             HHTTTCCEEECSEEEESC-CCCHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEE
T ss_pred             hcccccceeECcccCCCC-cccccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccccccccc
Confidence            334444444444444432 222333344555555555544 233334444556666666666653 2 235666777777


Q ss_pred             ccCCceeccccC-ccCCCCCCCcEEeCCCCcCcccCCcc----------cccCCCCCeee
Q 002105          521 DLSNNQLSGHIP-ASLSEMPVLGQLDLSENQLSGKIPQT----------LGRVASLVQVN  569 (966)
Q Consensus       521 ~Ls~N~l~~~~p-~~l~~l~~L~~LdLs~N~l~g~~p~~----------l~~l~~L~~l~  569 (966)
                      +|++|+++.... ..+..+++|+.|+|++|++....+..          +..+++|+.||
T Consensus       121 ~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD  180 (198)
T d1m9la_         121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD  180 (198)
T ss_dssp             EESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred             ccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence            777777764322 34667777777777777766544432          45677777776


No 98 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.09  E-value=1.2e-12  Score=130.28  Aligned_cols=86  Identities=27%  Similarity=0.365  Sum_probs=33.1

Q ss_pred             cccCCcceEEEccCCCCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCC-hhhhcCCCC
Q 002105          200 IGQLRNLKWIYLGYNNLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIP-KSILGLKSL  278 (966)
Q Consensus       200 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L  278 (966)
                      +..+++|++|+|++|.++ .+|..+..+++|++|++++|+++..  +.+.++++|++|++++|+++.... ..+..+++|
T Consensus        66 l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L  142 (198)
T d1m9la_          66 LSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKL  142 (198)
T ss_dssp             HHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTC
T ss_pred             ccCCccccChhhcccccc-ccccccccccccccccccccccccc--ccccccccccccccccchhccccccccccCCCcc
Confidence            333444444444444433 2222222233344444444444321  123344444444444444432111 233444444


Q ss_pred             CEEEccCCcC
Q 002105          279 VSFDLSDNYL  288 (966)
Q Consensus       279 ~~L~Ls~N~l  288 (966)
                      +.|++++|.+
T Consensus       143 ~~L~L~~N~l  152 (198)
T d1m9la_         143 EDLLLAGNPL  152 (198)
T ss_dssp             SEEEECSSHH
T ss_pred             ceeecCCCcc
Confidence            4444444443


No 99 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09  E-value=1.9e-10  Score=109.26  Aligned_cols=91  Identities=25%  Similarity=0.211  Sum_probs=42.3

Q ss_pred             CcccccCCcceEEEccCC-CCCCCCCcCccCCCCCCEEEeecccccccCCcCCCCCCccceEeccccccCCCCChhhhcC
Q 002105          197 PREIGQLRNLKWIYLGYN-NLSGEIPKEIGDLTSLNHLDLVYNNLTGQIPPSFGNLSNLRYLFLYQNKLTGSIPKSILGL  275 (966)
Q Consensus       197 p~~l~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l  275 (966)
                      |..+..+++|++|++++| .++...+.+|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+++...+..|. .
T Consensus        24 p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~-~  102 (156)
T d2ifga3          24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ-G  102 (156)
T ss_dssp             TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC-S
T ss_pred             cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhc-c
Confidence            333444444444444333 24333333445555555555555555544444455555555555555555432222232 2


Q ss_pred             CCCCEEEccCCcC
Q 002105          276 KSLVSFDLSDNYL  288 (966)
Q Consensus       276 ~~L~~L~Ls~N~l  288 (966)
                      .+|+.|+|++|.+
T Consensus       103 ~~l~~L~L~~Np~  115 (156)
T d2ifga3         103 LSLQELVLSGNPL  115 (156)
T ss_dssp             CCCCEEECCSSCC
T ss_pred             ccccccccCCCcc
Confidence            2455555555554


No 100
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32  E-value=3.5e-08  Score=93.96  Aligned_cols=100  Identities=22%  Similarity=0.213  Sum_probs=65.7

Q ss_pred             ccccccccccccccCCCcccCcCCCCEEEccCCccCCCC--hhhccccccccccccCCceeccccCccCCCCCCCcEEeC
Q 002105          469 LENLDLSENRFSGTIPRSFGRLSELMQLKISRNKLFGDI--PEELSSCKKLVSLDLSNNQLSGHIPASLSEMPVLGQLDL  546 (966)
Q Consensus       469 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~LdL  546 (966)
                      +..++..+|... .++..+..+++|++|+|++|+++...  +..+..+++|+.|+|++|.++...+-.+.....|+.|++
T Consensus        44 ~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L  122 (162)
T d1koha1          44 DVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL  122 (162)
T ss_dssp             CCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCC
T ss_pred             hhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeec
Confidence            344444444332 33444556778888888888887543  455677888888888888888544423334456888888


Q ss_pred             CCCcCcccCCcc-------cccCCCCCeee
Q 002105          547 SENQLSGKIPQT-------LGRVASLVQVN  569 (966)
Q Consensus       547 s~N~l~g~~p~~-------l~~l~~L~~l~  569 (966)
                      ++|+++......       +..+++|+.||
T Consensus       123 ~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD  152 (162)
T d1koha1         123 DGNSLSDTFRDQSTYISAIRERFPKLLRLD  152 (162)
T ss_dssp             TTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred             CCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence            888887655432       45678888776


No 101
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.04  E-value=1.8e-07  Score=88.93  Aligned_cols=84  Identities=26%  Similarity=0.213  Sum_probs=49.9

Q ss_pred             CCCCCCccceEeccccccCCCC--ChhhhcCCCCCEEEccCCcCcccCchhhcCCCCCceecccCCCCCCCCCCC-----
Q 002105          247 SFGNLSNLRYLFLYQNKLTGSI--PKSILGLKSLVSFDLSDNYLSGEIPEEVIQLQNLEILHLFSNNFTGKIPSS-----  319 (966)
Q Consensus       247 ~~~~l~~L~~L~L~~n~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-----  319 (966)
                      .+.++++|++|+|++|+++...  +..+..+++|+.|+|++|.++...+-.+....+|+.|++++|.+.......     
T Consensus        60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~  139 (162)
T d1koha1          60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS  139 (162)
T ss_dssp             HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred             HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHH
Confidence            3345667777777777776432  344566777777777777776543333444456777777777766443321     


Q ss_pred             --CCCCCCccEEE
Q 002105          320 --LASMPKLQVLQ  330 (966)
Q Consensus       320 --l~~l~~L~~L~  330 (966)
                        +..+|+|+.||
T Consensus       140 ~i~~~~P~L~~LD  152 (162)
T d1koha1         140 AIRERFPKLLRLD  152 (162)
T ss_dssp             HHHTTSTTCCEET
T ss_pred             HHHHHCCCCCEEC
Confidence              34456666554


No 102
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=97.78  E-value=0.00013  Score=74.26  Aligned_cols=97  Identities=15%  Similarity=0.074  Sum_probs=63.5

Q ss_pred             ccEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEccCCCCHHHHHHcC
Q 002105          696 VSSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYIEGKELSEVLRNL  775 (966)
Q Consensus       696 ~~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~l  775 (966)
                      .+.||++.  .++..+++|+...........+.+|...+..+-.|=-+.++++++..++..++||||++|..+.+....-
T Consensus        27 ~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~  104 (263)
T d1j7la_          27 PAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE  104 (263)
T ss_dssp             SSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC
T ss_pred             CCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc
Confidence            35699876  4666788888765544445556777766554322333567778888889999999999998886644221


Q ss_pred             CHHHHHHHHHHHHHHHHHHhh
Q 002105          776 SWERRRKVAIGIAKALRFLHF  796 (966)
Q Consensus       776 ~~~~~~~i~~~ia~~l~yLH~  796 (966)
                        ..+.+++.++++.++.||.
T Consensus       105 --~~~~~~~~~l~~~l~~lH~  123 (263)
T d1j7la_         105 --QSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             --SCHHHHHHHHHHHHHHHHT
T ss_pred             --ccHHHHHHHHHHHHHHHhc
Confidence              1233455566666666663


No 103
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.15  E-value=0.00054  Score=69.14  Aligned_cols=68  Identities=10%  Similarity=0.189  Sum_probs=45.0

Q ss_pred             cEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhc-CCCceeEEeeEEecCCeeEEEEEccCCCCH
Q 002105          697 SSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLI-MHPNIVRLHGVCRSEKAAYLVYEYIEGKEL  768 (966)
Q Consensus       697 ~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~-~H~niv~l~g~~~~~~~~~lv~Ey~~~g~L  768 (966)
                      +.||++.. ..+..+++|.-...   ....+..|...+..+- ..-.+.++++++.+++..++||||++|.++
T Consensus        25 ~~v~r~~~-~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          25 AAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             CEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             CeEEEEEe-CCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            46898875 56667777764322   2234556665554321 223367778888888899999999998665


No 104
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.00  E-value=0.0001  Score=69.60  Aligned_cols=86  Identities=14%  Similarity=0.163  Sum_probs=49.5

Q ss_pred             cCcCCCCEEEccCCccCC----CChhhccccccccccccCCceecccc----CccCCCCCCCcEEeCCCCcCccc-----
Q 002105          488 GRLSELMQLKISRNKLFG----DIPEELSSCKKLVSLDLSNNQLSGHI----PASLSEMPVLGQLDLSENQLSGK-----  554 (966)
Q Consensus       488 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~LdLs~N~l~g~-----  554 (966)
                      ...+.|+.|+|++|.+..    .+...+...+.|+.|+|++|.++..-    -..+..-++|+.|+|++|.+...     
T Consensus        41 ~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~  120 (167)
T d1pgva_          41 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE  120 (167)
T ss_dssp             TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred             hhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHH
Confidence            344556666666666542    22233445566777777777766431    22355556788888877765421     


Q ss_pred             --CCcccccCCCCCeeeCcCC
Q 002105          555 --IPQTLGRVASLVQVNISHN  573 (966)
Q Consensus       555 --~p~~l~~l~~L~~l~ls~N  573 (966)
                        +...+...++|+.|+++.+
T Consensus       121 ~~l~~~L~~n~sL~~l~l~~~  141 (167)
T d1pgva_         121 MDMMMAIEENESLLRVGISFA  141 (167)
T ss_dssp             HHHHHHHHHCSSCCEEECCCC
T ss_pred             HHHHHHHHhCCCccEeeCcCC
Confidence              2334455667777777544


No 105
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.86  E-value=0.00017  Score=67.91  Aligned_cols=62  Identities=18%  Similarity=0.018  Sum_probs=30.6

Q ss_pred             CCCCCCEEEeeccccccc----CCcCCCCCCccceEeccccccCCC-------CChhhhcCCCCCEEEccCCc
Q 002105          226 DLTSLNHLDLVYNNLTGQ----IPPSFGNLSNLRYLFLYQNKLTGS-------IPKSILGLKSLVSFDLSDNY  287 (966)
Q Consensus       226 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~-------~p~~l~~l~~L~~L~Ls~N~  287 (966)
                      ..+.|++|+|++|.+...    +-..+...+.|++|++++|.+...       +...+..-++|+.|+++.+.
T Consensus        70 ~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~  142 (167)
T d1pgva_          70 TSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS  142 (167)
T ss_dssp             HCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred             hcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence            344555666666555431    112334445566666666544321       12233445666666665543


No 106
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=96.33  E-value=0.0076  Score=64.67  Aligned_cols=76  Identities=13%  Similarity=0.124  Sum_probs=44.3

Q ss_pred             cCCCCCccEEEEEEEecCCcEEEEEEEeccC-------cccccchHHHHHHHHhhcCC--CceeEEeeEEecCCeeEEEE
Q 002105          690 SRGKKGVSSSYKVRSLANDMQFVVKKIIDVN-------TITTSSFWPDVSQFGKLIMH--PNIVRLHGVCRSEKAAYLVY  760 (966)
Q Consensus       690 ~~g~~g~~~vy~~~~~~~~~~vavk~~~~~~-------~~~~~~~~~e~~~~~~~~~H--~niv~l~g~~~~~~~~~lv~  760 (966)
                      .+|.|....||++....+++.++||.-...-       .........|.+.+..+-.+  ..+.+++.+.  ++..++||
T Consensus        33 eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~lvm  110 (392)
T d2pula1          33 EIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTVM  110 (392)
T ss_dssp             ECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEEE
T ss_pred             EeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEEEE
Confidence            4577777889999876667889999764321       11112234466555443233  3466676654  44567999


Q ss_pred             EccCCCC
Q 002105          761 EYIEGKE  767 (966)
Q Consensus       761 Ey~~~g~  767 (966)
                      ||+++..
T Consensus       111 E~L~~~~  117 (392)
T d2pula1         111 EDLSHLK  117 (392)
T ss_dssp             CCCTTSE
T ss_pred             eccCCcc
Confidence            9998754


No 107
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.36  E-value=0.0013  Score=61.61  Aligned_cols=13  Identities=31%  Similarity=0.524  Sum_probs=7.5

Q ss_pred             cCCCCCCEEEcCC
Q 002105           82 FHLPHVESINLSS   94 (966)
Q Consensus        82 ~~l~~L~~L~Ls~   94 (966)
                      .+.+.|++|+|++
T Consensus        14 ~~~~~L~~L~L~~   26 (166)
T d1io0a_          14 NNDPDLEEVNLNN   26 (166)
T ss_dssp             TTCTTCCEEECTT
T ss_pred             hcCCCCcEEEcCC
Confidence            3445666666665


No 108
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.35  E-value=0.0011  Score=61.93  Aligned_cols=87  Identities=18%  Similarity=0.262  Sum_probs=50.2

Q ss_pred             cCcCCCCEEEccCCccCCCC----hhhccccccccccccCCceeccc----cCccCCCCCCCcEEeC--CCCcCcc----
Q 002105          488 GRLSELMQLKISRNKLFGDI----PEELSSCKKLVSLDLSNNQLSGH----IPASLSEMPVLGQLDL--SENQLSG----  553 (966)
Q Consensus       488 ~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~LdL--s~N~l~g----  553 (966)
                      ...+.|++|+|++|.+....    -..+...++++.+++++|.+...    +-..+...++|+.++|  ++|.+..    
T Consensus        43 ~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~  122 (166)
T d1io0a_          43 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM  122 (166)
T ss_dssp             TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred             hcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHH
Confidence            34556666666666654322    22344566777777777776532    2234555667765444  5666643    


Q ss_pred             cCCcccccCCCCCeeeCcCCc
Q 002105          554 KIPQTLGRVASLVQVNISHNH  574 (966)
Q Consensus       554 ~~p~~l~~l~~L~~l~ls~N~  574 (966)
                      .+...+...+.|+.|+++.+.
T Consensus       123 ~La~~L~~n~~L~~L~l~~~~  143 (166)
T d1io0a_         123 EIANMLEKNTTLLKFGYHFTQ  143 (166)
T ss_dssp             HHHHHHHHCSSCCEEECCCSS
T ss_pred             HHHHHHHhCCCcCEEeCcCCC
Confidence            233455567788888876554


No 109
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=90.29  E-value=0.4  Score=49.08  Aligned_cols=68  Identities=15%  Similarity=0.208  Sum_probs=38.8

Q ss_pred             EEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCC----CceeEEe--eEEecCCeeEEEEEccCCCC
Q 002105          698 SSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMH----PNIVRLH--GVCRSEKAAYLVYEYIEGKE  767 (966)
Q Consensus       698 ~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H----~niv~l~--g~~~~~~~~~lv~Ey~~~g~  767 (966)
                      .||+++. .+|..+|+|.-... ..+.+++..|...+..+-.+    |..+..-  .....++..+.|++|++|..
T Consensus        37 ~vy~v~~-~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          37 RVYQFQD-EDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             EEEEECC-TTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             eeEEEEc-CCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            5999986 78888999865432 22334455555444443111    2112221  12234667899999998743


No 110
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=88.18  E-value=0.44  Score=50.22  Aligned_cols=72  Identities=15%  Similarity=0.052  Sum_probs=38.4

Q ss_pred             CCCCCccEEEEEEEecC-------CcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEecCCeeEEEEEcc
Q 002105          691 RGKKGVSSSYKVRSLAN-------DMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCRSEKAAYLVYEYI  763 (966)
Q Consensus       691 ~g~~g~~~vy~~~~~~~-------~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~~~~~~~lv~Ey~  763 (966)
                      .++|-.-.+|++.....       ...|++ |+.... .......+|...+..+-.|.=..++++++..    .+||||+
T Consensus        50 l~GGltN~~y~v~~~~~~~~~~~~~~~vll-Ri~g~~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi  123 (395)
T d1nw1a_          50 IKGGMSNMLFLCRLSEVYPPIRNEPNKVLL-RVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI  123 (395)
T ss_dssp             ECCCTTEEEEEEEECTTSCCSSSCCSEEEE-EEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred             cCCccccceEEEEeCCCCccccCCCCcEEE-EecCCc-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEe
Confidence            34455556898876321       233444 444321 1112234555544443335334578887753    6899999


Q ss_pred             CCCCH
Q 002105          764 EGKEL  768 (966)
Q Consensus       764 ~~g~L  768 (966)
                      +|..+
T Consensus       124 ~g~~l  128 (395)
T d1nw1a_         124 PSRPL  128 (395)
T ss_dssp             CEEEC
T ss_pred             ccccC
Confidence            97544


No 111
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=49.78  E-value=5.2  Score=39.76  Aligned_cols=31  Identities=19%  Similarity=0.125  Sum_probs=23.9

Q ss_pred             CCCCeEeecCCCCcEEEcCCCCceEEEeccccc
Q 002105          798 CSPSVVAGDVSPGKVIVDGKDEPHLRLSVPGLA  830 (966)
Q Consensus       798 ~~~~iiHrDlk~~Nill~~~~~~~~~~~~~~~~  830 (966)
                      ...++||+|+.+.||+++++.  ...+.||+.+
T Consensus       181 L~~giIHgDl~~dNvl~~~~~--v~gvIDF~~~  211 (316)
T d2ppqa1         181 LPAGVIHADLFQDNVFFLGDE--LSGLIDFYFA  211 (316)
T ss_dssp             SCEEEECSCCCGGGEEEETTE--EEEECCCTTC
T ss_pred             cccccccCCcchhhhhccccc--ceeEeccccc
Confidence            356899999999999999642  3357777765


No 112
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=24.39  E-value=45  Score=32.32  Aligned_cols=125  Identities=10%  Similarity=0.110  Sum_probs=67.0

Q ss_pred             cEEEEEEEecCCcEEEEEEEeccCcccccchHHHHHHHHhhcCCCceeEEeeEEe-----------------------cC
Q 002105          697 SSSYKVRSLANDMQFVVKKIIDVNTITTSSFWPDVSQFGKLIMHPNIVRLHGVCR-----------------------SE  753 (966)
Q Consensus       697 ~~vy~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~~~~~~~H~niv~l~g~~~-----------------------~~  753 (966)
                      +.|+-+..  ++..+++|.   ......+-|-.|.+.... ++-|..+-+. .|.                       -.
T Consensus        82 ~Gv~FV~~--e~gaiVlK~---s~tta~E~y~~eLAr~LG-vpvPqmRvI~-~~~~E~~~~~~~~l~~~e~d~~I~sel~  154 (342)
T d1cjaa_          82 EGLFFVET--ESGVFIVKR---STNIESETFCSLLCMRLG-LHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVITTLAN  154 (342)
T ss_dssp             SCEEEEEE--SSCEEEEEC---CTTHHHHHHHHHHHHHHT-CCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHHHHTT
T ss_pred             ceEEEEEc--CCceEEEec---CCchHHHHHHHHHHHHhC-CCCCceEEec-CCCHHHHHHHHHHhcCCChhHHHHHHHh
Confidence            33665543  455667774   222333446666666666 5777766543 111                       12


Q ss_pred             CeeEEEEEccCCCCHHHHHHcC-CHHHHHHHHHH---HHHHHHHHhhcCCCCeEeecC-CCCcEEEcCCCCceEEEeccc
Q 002105          754 KAAYLVYEYIEGKELSEVLRNL-SWERRRKVAIG---IAKALRFLHFHCSPSVVAGDV-SPGKVIVDGKDEPHLRLSVPG  828 (966)
Q Consensus       754 ~~~~lv~Ey~~~g~L~~~l~~l-~~~~~~~i~~~---ia~~l~yLH~~~~~~iiHrDl-k~~Nill~~~~~~~~~~~~~~  828 (966)
                      ...+++|||++|..+.+.-... +.....+.+.+   |+--=.++|...+-|+++|+- .++||+++.++. .+...|.+
T Consensus       155 ~A~~liMeYvpG~~l~e~~~~~a~~~fs~~~l~~LGkIiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~-~~~~IDs~  233 (342)
T d1cjaa_         155 QANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA-TVVPIDSK  233 (342)
T ss_dssp             CSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT-CEEECSCC
T ss_pred             cccceeeeccCCccccccccccchhhhcHHHHHHhhhHHHHHHHHcCCccccccccCCCCccceEEecCCc-EEEEecCC
Confidence            4568999999987764431100 00000112222   222223678777778888743 788999987553 34444444


Q ss_pred             c
Q 002105          829 L  829 (966)
Q Consensus       829 ~  829 (966)
                      .
T Consensus       234 i  234 (342)
T d1cjaa_         234 I  234 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3


Done!