Query 002109
Match_columns 965
No_of_seqs 402 out of 931
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 12:43:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qwo_B Putative tyrosine-prote 99.8 2.7E-21 9.1E-26 177.2 6.7 89 817-909 1-90 (92)
2 3ag7_A Putative uncharacterize 99.8 3.2E-19 1.1E-23 167.4 8.5 96 814-909 6-101 (106)
3 1n4c_A Auxilin; four helix bun 99.7 1E-17 3.5E-22 170.6 12.2 93 815-911 83-176 (182)
4 1wjz_A 1700030A21RIK protein; 97.8 2E-05 6.7E-10 71.4 4.9 58 851-909 19-76 (94)
5 2ys8_A RAB-related GTP-binding 97.5 2.7E-05 9.4E-10 70.5 1.7 52 851-910 30-81 (90)
6 1iur_A KIAA0730 protein; DNAJ 97.4 7.3E-05 2.5E-09 67.8 3.9 54 855-914 23-76 (88)
7 2ej7_A HCG3 gene; HCG3 protein 97.4 0.00011 3.9E-09 64.8 3.9 54 851-910 12-65 (82)
8 1hdj_A Human HSP40, HDJ-1; mol 97.2 0.00013 4.4E-09 63.8 3.0 50 852-909 7-56 (77)
9 2dmx_A DNAJ homolog subfamily 97.2 0.00011 3.6E-09 66.5 2.5 56 852-913 13-68 (92)
10 3hho_A CO-chaperone protein HS 97.2 0.00021 7.1E-09 72.3 4.7 63 859-923 17-84 (174)
11 2cug_A Mkiaa0962 protein; DNAJ 97.2 0.00015 5E-09 65.2 3.0 51 851-909 20-70 (88)
12 2yua_A Williams-beuren syndrom 97.2 0.00016 5.4E-09 66.5 3.0 54 851-911 20-73 (99)
13 1fpo_A HSC20, chaperone protei 97.2 0.00031 1E-08 70.9 5.3 62 859-922 14-80 (171)
14 2ctr_A DNAJ homolog subfamily 97.1 0.00017 5.9E-09 64.7 2.7 52 852-911 11-62 (88)
15 2ctp_A DNAJ homolog subfamily 97.1 0.00015 5.2E-09 63.5 2.1 50 852-909 11-60 (78)
16 2qsa_A DNAJ homolog DNJ-2; J-d 97.1 0.00057 2E-08 63.6 5.7 56 851-910 18-74 (109)
17 3bvo_A CO-chaperone protein HS 97.0 0.00027 9.3E-09 73.4 3.1 97 824-922 12-122 (207)
18 2lgw_A DNAJ homolog subfamily 97.0 0.00034 1.2E-08 64.6 3.2 51 854-910 8-58 (99)
19 1bq0_A DNAJ, HSP40; chaperone, 97.0 0.00022 7.6E-09 65.9 1.9 55 851-912 6-60 (103)
20 2l6l_A DNAJ homolog subfamily 97.0 0.00034 1.2E-08 69.0 3.4 55 854-909 16-70 (155)
21 2ctw_A DNAJ homolog subfamily 96.9 0.00033 1.1E-08 65.6 2.3 52 851-909 20-71 (109)
22 2guz_A Mitochondrial import in 96.9 0.00046 1.6E-08 59.8 2.8 45 855-910 21-66 (71)
23 2och_A Hypothetical protein DN 96.8 0.00047 1.6E-08 59.7 2.6 49 851-909 11-59 (73)
24 2dn9_A DNAJ homolog subfamily 96.8 0.0006 2.1E-08 59.7 3.2 54 851-911 10-63 (79)
25 2ctq_A DNAJ homolog subfamily 96.7 0.001 3.6E-08 62.4 3.8 51 851-908 23-73 (112)
26 1gh6_A Large T antigen; tumor 96.3 0.0011 3.6E-08 63.0 1.3 20 863-882 25-44 (114)
27 2o37_A Protein SIS1; HSP40, J- 96.3 0.0019 6.4E-08 58.5 2.8 46 853-908 13-58 (92)
28 1faf_A Large T antigen; J doma 96.2 0.0029 1E-07 55.9 3.7 43 860-913 25-67 (79)
29 3uo3_A J-type CO-chaperone JAC 95.5 0.0021 7.2E-08 65.5 -0.2 59 859-922 29-88 (181)
30 3apq_A DNAJ homolog subfamily 94.8 0.01 3.4E-07 60.0 2.3 47 855-908 9-55 (210)
31 3lz8_A Putative chaperone DNAJ 94.2 0.008 2.7E-07 66.5 0.0 33 851-883 31-63 (329)
32 2guz_B Mitochondrial import in 93.6 0.033 1.1E-06 47.9 2.7 38 860-908 19-56 (65)
33 2i1j_A Moesin; FERM, coiled-co 93.3 0.052 1.8E-06 64.2 4.7 9 337-345 214-222 (575)
34 2i1j_A Moesin; FERM, coiled-co 92.9 0.23 8E-06 58.7 9.2 9 813-821 536-544 (575)
35 2pf4_E Small T antigen; PP2A, 92.0 0.071 2.4E-06 54.1 2.9 47 862-912 27-73 (174)
36 3apo_A DNAJ homolog subfamily 86.1 0.16 5.6E-06 61.1 0.5 61 851-912 24-85 (780)
37 2y4t_A DNAJ homolog subfamily 85.8 0.59 2E-05 50.2 4.6 50 855-908 389-438 (450)
38 2zuo_A MVP, major vault protei 79.3 78 0.0027 39.1 19.5 6 743-748 836-841 (861)
39 1i84_S Smooth muscle myosin he 45.9 65 0.0022 41.2 10.7 6 91-96 230-235 (1184)
40 1i84_S Smooth muscle myosin he 37.8 62 0.0021 41.4 8.6 8 65-72 229-236 (1184)
41 3v6i_B V-type ATP synthase, su 31.3 3.3E+02 0.011 25.4 14.3 85 601-686 12-97 (105)
42 3vkg_A Dynein heavy chain, cyt 30.1 1.5E+03 0.05 32.6 23.2 6 910-915 2482-2487(3245)
No 1
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.83 E-value=2.7e-21 Score=177.20 Aligned_cols=89 Identities=40% Similarity=0.649 Sum_probs=82.5
Q ss_pred HhHHHHHHHHhccccccHHHHhhccccccCCC-CCCccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHH
Q 002109 817 ETLDVEIKRWAAGKEGNIRALLATMQYVLWPE-SGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAE 895 (965)
Q Consensus 817 d~~~~ki~~W~~gke~nIRaLLssL~~VLW~~-~~W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~ 895 (965)
|.|+.+|+.|+.||++|||+||+|||.|||++ +.|+.+++..+.++..||++|||+++.+||||++. . +++++|+
T Consensus 1 ~~i~~~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~--~--~~~~~A~ 76 (92)
T 2qwo_B 1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATG--Q--PYEQYAK 76 (92)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTT--S--TTHHHHH
T ss_pred ChHHHHHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--c--hhHhHHH
Confidence 57999999999999999999999999999995 99999999999999999999999999999999974 2 2346999
Q ss_pred HHHHHHHHHHHHhh
Q 002109 896 KVFDLLKVQQIYCR 909 (965)
Q Consensus 896 ~vF~~Ln~a~~~~r 909 (965)
.+|..|++||++++
T Consensus 77 ~~F~~i~eAyevL~ 90 (92)
T 2qwo_B 77 MIFMELNDAWSEFE 90 (92)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 2
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.77 E-value=3.2e-19 Score=167.39 Aligned_cols=96 Identities=51% Similarity=0.932 Sum_probs=90.5
Q ss_pred HhHHhHHHHHHHHhccccccHHHHhhccccccCCCCCCccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHH
Q 002109 814 RIAETLDVEIKRWAAGKEGNIRALLATMQYVLWPESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYI 893 (965)
Q Consensus 814 ~l~d~~~~ki~~W~~gke~nIRaLLssL~~VLW~~~~W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~i 893 (965)
.+++.|+.+|+.|+.|+++|||+||++|+.|||++..|..|.+.+..+...||++|||+++.+||||+...|++.+++++
T Consensus 6 ~~~~~~~~~i~~W~~~~~~~ir~lL~~l~~~l~~~~d~Y~vl~~~~As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~ 85 (106)
T 3ag7_A 6 EEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYM 85 (106)
T ss_dssp HHHHHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTSCCCCCCGGGSCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcccCCHHHHcCCCCCCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHH
Confidence 35789999999999999999999999999999999999999999988899999999999999999999977788999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 002109 894 AEKVFDLLKVQQIYCR 909 (965)
Q Consensus 894 A~~vF~~Ln~a~~~~r 909 (965)
|+..|..|++||+.+.
T Consensus 86 A~~~F~~I~~AYevLs 101 (106)
T 3ag7_A 86 AEKVFELLQEAWDHFN 101 (106)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999998864
No 3
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.73 E-value=1e-17 Score=170.60 Aligned_cols=93 Identities=41% Similarity=0.638 Sum_probs=84.2
Q ss_pred hHHhHHHHHHHHhccccccHHHHhhccccccCC-CCCCccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHH
Q 002109 815 IAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYI 893 (965)
Q Consensus 815 l~d~~~~ki~~W~~gke~nIRaLLssL~~VLW~-~~~W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~i 893 (965)
.+|.|+.+|..|..|+++|||+||++|+.|||+ ...|..+++...++...||++|||+++++||||+.. .+.+ .+
T Consensus 83 ~~D~l~~~i~~W~~gk~~niRaLLssl~~vl~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~--~~~e--~~ 158 (182)
T 1n4c_A 83 EMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATG--QPYE--QY 158 (182)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHGGGGSCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSS--CTTH--HH
T ss_pred hccHHHHHHHHHHcccHHHHHHHHHHHHHHhcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCC--cchH--HH
Confidence 378899999999999999999999999999999 578999999999999999999999999999999974 3333 49
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 002109 894 AEKVFDLLKVQQIYCRFF 911 (965)
Q Consensus 894 A~~vF~~Ln~a~~~~r~~ 911 (965)
|+.+|..|++||+++.=.
T Consensus 159 A~~~F~~I~eAYevLsD~ 176 (182)
T 1n4c_A 159 AKMIFMELNDAWSEFENQ 176 (182)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCH
Confidence 999999999999988643
No 4
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=97.76 E-value=2e-05 Score=71.40 Aligned_cols=58 Identities=16% Similarity=0.108 Sum_probs=47.9
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
|.-+++..-.+...||++|+++++.+||||+.. +.+.+.+-.|...|..|++||+.+.
T Consensus 19 y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~-~~~~~~~~~~~~~f~~i~~Ay~~L~ 76 (94)
T 1wjz_A 19 YSILGADPSANMSDLKQKYQKLILLYHPDKQSA-DVPAGTMEECMQKFIEIDQAWKILG 76 (94)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCT-TCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-CCChhhhHHHHHHHHHHHHHHHHHC
Confidence 455666666788999999999999999999874 3456667789999999999998764
No 5
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.49 E-value=2.7e-05 Score=70.49 Aligned_cols=52 Identities=25% Similarity=0.414 Sum_probs=40.4
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRF 910 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~ 910 (965)
|.-+++..-.+...||++|+++++.+||||....+ +...|..|++||+.+.=
T Consensus 30 y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~--------~~~~f~~i~~Ay~~L~d 81 (90)
T 2ys8_A 30 WDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--------SEDAFKAVVNARTALLK 81 (90)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTT--------HHHHHHHHHHHHHHHHH
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcc--------HHHHHHHHHHHHHHHCC
Confidence 44455566677899999999999999999987432 34569999999887653
No 6
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=97.44 E-value=7.3e-05 Score=67.81 Aligned_cols=54 Identities=28% Similarity=0.241 Sum_probs=41.7
Q ss_pred cccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 002109 855 SLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFILL 914 (965)
Q Consensus 855 ~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~~~ 914 (965)
++..-.+...||++|+++++.+||||... . .-.|...|..|++||+.+.=.+++
T Consensus 23 gv~~~as~~eIKkaYrkla~~~HPDk~~~---~---~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 23 EQAWKLPESERKKIIRRLYLKWHPDKNPE---N---HDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHTTSSCSHHHHHHHHHHHHHTCTTTSSS---C---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCC---c---hHHHHHHHHHHHHHHHHHHhhccc
Confidence 33334466899999999999999999652 1 135788999999999988765554
No 7
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.35 E-value=0.00011 Score=64.78 Aligned_cols=54 Identities=30% Similarity=0.357 Sum_probs=41.8
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRF 910 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~ 910 (965)
|.-+++..-.+...||++|++.++.+||||... . .-.|...|..|++||+.+.=
T Consensus 12 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~---~~~a~~~f~~i~~Ay~~L~d 65 (82)
T 2ej7_A 12 YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPE---N---KEEAERRFKQVAEAYEVLSD 65 (82)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCST---T---HHHHHHHHHHHHHHHHHHSS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---c---HHHHHHHHHHHHHHHHHHCC
Confidence 344455555678999999999999999999753 1 23578899999999987653
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=97.25 E-value=0.00013 Score=63.78 Aligned_cols=50 Identities=26% Similarity=0.342 Sum_probs=38.2
Q ss_pred ccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 852 QPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 852 ~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
.-+++..-.+...||++|+++++.+||||.... .+...|..|++||+.+.
T Consensus 7 ~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~ 56 (77)
T 1hdj_A 7 QTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--------GAEEKFKEIAEAYDVLS 56 (77)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--------THHHHHHHHHHHHHHTT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHC
Confidence 344555556789999999999999999998642 24667888888887654
No 9
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.24 E-value=0.00011 Score=66.53 Aligned_cols=56 Identities=29% Similarity=0.275 Sum_probs=41.6
Q ss_pred ccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 002109 852 QPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFIL 913 (965)
Q Consensus 852 ~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~~ 913 (965)
.-+++..-.+...||++|+++++.+||||.... .-.|+..|..|++||+.+.=...
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~d~~~ 68 (92)
T 2dmx_A 13 EVLGVQASASPEDIKKAYRKLALRWHPDKNPDN------KEEAEKKFKLVSEAYEVLSDSKK 68 (92)
T ss_dssp HHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC------SHHHHHHHHHHHHHHHHHHSHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc------HHHHHHHHHHHHHHHHHHCCHHH
Confidence 344555556779999999999999999998632 12567788888888887654443
No 10
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=97.23 E-value=0.00021 Score=72.32 Aligned_cols=63 Identities=14% Similarity=0.201 Sum_probs=48.0
Q ss_pred cchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhhh-----cccccccccc
Q 002109 859 LITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFIL-----LCLEGFNLTM 923 (965)
Q Consensus 859 l~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~~-----~~~~~~~~~~ 923 (965)
-|+...||++|++..+.+||||+.. .+...+.+|...|..||+||..++=... +.|+|+.+.-
T Consensus 17 ~id~~eIk~aYr~l~~~~HPDk~~~--~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~~~~ 84 (174)
T 3hho_A 17 ELDGSLLSSQFRALQKRFHPDNFAT--ASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQGIEMNA 84 (174)
T ss_dssp CCCHHHHHHHHHHHHHHHCGGGSTT--SCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCCC-
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHccCCCccc
Confidence 3558999999999999999999874 4455667788999999999887653332 5567777654
No 11
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=97.20 E-value=0.00015 Score=65.23 Aligned_cols=51 Identities=24% Similarity=0.285 Sum_probs=37.5
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
|.-+++..-.+...||++|++.++.+||||.... .++..|..|++||+.+.
T Consensus 20 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~ 70 (88)
T 2cug_A 20 YRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP--------GAEDRFIQISKAYEILS 70 (88)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST--------THHHHHHHHHHHHHHHH
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHHC
Confidence 4556666667889999999999999999998742 13455666666665543
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.00016 Score=66.47 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=40.3
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFF 911 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~ 911 (965)
|.-+++..-.+...||++|++.++.+||||.... . .|...|..|++||+++.=.
T Consensus 20 Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~-----~a~~~f~~i~~Ay~~L~d~ 73 (99)
T 2yua_A 20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS--A-----EAAERFTRISQAYVVLGSA 73 (99)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC--S-----HHHHHHHHHHHHHHHTTSH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--H-----HHHHHHHHHHHHHHHHCCH
Confidence 3445555566789999999999999999998632 1 2566788888888776433
No 13
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=97.18 E-value=0.00031 Score=70.94 Aligned_cols=62 Identities=19% Similarity=0.276 Sum_probs=47.4
Q ss_pred cchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhhh-----ccccccccc
Q 002109 859 LITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFIL-----LCLEGFNLT 922 (965)
Q Consensus 859 l~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~~-----~~~~~~~~~ 922 (965)
-|+...||++|++..+.+||||+.. .+...+-+|...|..||+||..++=... +.|.|+.+.
T Consensus 14 ~i~~~eIk~aYr~L~~~~HPDk~~~--~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~~~ 80 (171)
T 1fpo_A 14 QLDTQALSLRFQDLQRQYHPDKFAS--GSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLA 80 (171)
T ss_dssp CCCHHHHHHHHHHHHHHTCGGGGTT--SCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCTT
T ss_pred CCCHHHHHHHHHHHHHHhCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCcc
Confidence 4578999999999999999999974 3445556788899999999887653332 456676654
No 14
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.13 E-value=0.00017 Score=64.75 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=38.9
Q ss_pred ccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 002109 852 QPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFF 911 (965)
Q Consensus 852 ~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~ 911 (965)
.-+++..-.+...||++|+++++.+||||.... -|...|..|++||+.+.=.
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~a~~~f~~i~~Ay~~L~d~ 62 (88)
T 2ctr_A 11 DILGVPKSASERQIKKAFHKLAMKYHPDKNKSP--------DAEAKFREIAEAYETLSDA 62 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH--------HHHHHHHHHHHHHHHHHSS
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------HHHHHHHHHHHHHHHHCCH
Confidence 334455556789999999999999999997621 3667788888888776533
No 15
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.12 E-value=0.00015 Score=63.47 Aligned_cols=50 Identities=22% Similarity=0.313 Sum_probs=37.0
Q ss_pred ccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 852 QPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 852 ~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
.-+++..-.+...||++|++.++.+||||.... -+...|..|++||+.+.
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~~~~~f~~i~~Ay~~L~ 60 (78)
T 2ctp_A 11 EILGVSRGASDEDLKKAYRRLALKFHPDKNHAP--------GATEAFKAIGTAYAVLS 60 (78)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH--------HHHHHHHHHHHHHHHHT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHHC
Confidence 334444456779999999999999999998631 24667778888877654
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=97.07 E-value=0.00057 Score=63.64 Aligned_cols=56 Identities=20% Similarity=0.301 Sum_probs=42.9
Q ss_pred CccCcccccc-hhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 002109 851 WQPVSLTDLI-TAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRF 910 (965)
Q Consensus 851 W~~v~~~dl~-~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~ 910 (965)
|.-+++..-. +...||++|++.++.+||||... ....-.|...|..|++||+.+.=
T Consensus 18 y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~----~~~~~~a~~~f~~i~~AY~~L~d 74 (109)
T 2qsa_A 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKN----KEEKLLAEERFRVIATAYETLKD 74 (109)
T ss_dssp HHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCS----HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----ccccHHHHHHHHHHHHHHHHHCC
Confidence 4556666545 88999999999999999999863 34445678888888888876643
No 17
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=97.01 E-value=0.00027 Score=73.45 Aligned_cols=97 Identities=19% Similarity=0.269 Sum_probs=60.2
Q ss_pred HHHhcccc---ccHHHHhhcccccc-CCCCC---CccCccccc--chhhhHhHHhhhccccccCccccccCCCHHHHHHH
Q 002109 824 KRWAAGKE---GNIRALLATMQYVL-WPESG---WQPVSLTDL--ITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIA 894 (965)
Q Consensus 824 ~~W~~gke---~nIRaLLssL~~VL-W~~~~---W~~v~~~dl--~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA 894 (965)
.-|..|.. .+...+++..-.++ -++.. |.-+++..- ++...||++||+..+.+||||+.. .+...+-+|
T Consensus 12 ~Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~--~~~~e~~~a 89 (207)
T 3bvo_A 12 RCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQ--RSQTEKDFS 89 (207)
T ss_dssp BCSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTT--SCHHHHHHH
T ss_pred CCCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CCHHHHHHH
Confidence 35777654 23334444332223 22212 333444432 567899999999999999999974 344455678
Q ss_pred HHHHHHHHHHHHHhhhhhh-----ccccccccc
Q 002109 895 EKVFDLLKVQQIYCRFFIL-----LCLEGFNLT 922 (965)
Q Consensus 895 ~~vF~~Ln~a~~~~r~~~~-----~~~~~~~~~ 922 (965)
...|..||+||..++=-.. +.|.|+.+.
T Consensus 90 ~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~~~~ 122 (207)
T 3bvo_A 90 EKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIP 122 (207)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHhcCCCcc
Confidence 8889999999877652222 356777544
No 18
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=96.98 E-value=0.00034 Score=64.56 Aligned_cols=51 Identities=29% Similarity=0.339 Sum_probs=37.3
Q ss_pred CcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 002109 854 VSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRF 910 (965)
Q Consensus 854 v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~ 910 (965)
+++..-.+...||++|++.++.+||||.... .-.|..+|..|++||+.+.=
T Consensus 8 Lgv~~~as~~eIk~aYr~la~~~HPDk~~~~------~~~a~~~f~~I~~AY~vL~d 58 (99)
T 2lgw_A 8 LDVPRSASADDIKKAYRRKALQWHPDKNPDN------KEFAEKKFKEVAEAYEVLSD 58 (99)
T ss_dssp SSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC------CHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc------HHHHHHHHHHHHHHHHHHCC
Confidence 3444445678999999999999999997631 12467777788888776543
No 19
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=96.97 E-value=0.00022 Score=65.85 Aligned_cols=55 Identities=18% Similarity=0.255 Sum_probs=41.5
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFI 912 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~ 912 (965)
|.-+++..-.+...||++|+++++.+||||.... . .|+..|..|++||+.+.=..
T Consensus 6 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~------~a~~~f~~i~~Ay~~L~d~~ 60 (103)
T 1bq0_A 6 YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-K------EAEAKFKEIKEAYEVLTDSQ 60 (103)
T ss_dssp TTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-C------THHHHHHHHTTTTTSTTCSH
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-H------HHHHHHHHHHHHHHHHCCHH
Confidence 4445555567889999999999999999998742 1 25678889999988765433
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=96.97 E-value=0.00034 Score=68.99 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=43.3
Q ss_pred CcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 854 VSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 854 v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
+++..-.+...||++|+++.+.+||||.... .+.+.+-.|...|..||+||..++
T Consensus 16 Lgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~-~~~~~~~~a~~~f~~i~~Ay~~L~ 70 (155)
T 2l6l_A 16 LGADPSANISDLKQKYQKLILMYHPDKQSTD-VPAGTVEECVQKFIEIDQAWKILG 70 (155)
T ss_dssp HTCCTTCCHHHHHHHHHHHHHHHSCCCCCCC-CTTHHHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-CchhHHHHHHHHHHHHHHHHHHcC
Confidence 3444445679999999999999999999853 233555678899999999998765
No 21
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.89 E-value=0.00033 Score=65.55 Aligned_cols=52 Identities=29% Similarity=0.376 Sum_probs=38.9
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
|.-+++..-.+...||++|+++++.+||||... .. -|...|..|++||+.+.
T Consensus 20 Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~---~~----~a~~~f~~i~~Ay~vL~ 71 (109)
T 2ctw_A 20 YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPD---NP----EAADKFKEINNAHAILT 71 (109)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTT---CH----HHHHHHHHHHHHHHHHT
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC---cH----HHHHHHHHHHHHHHHHc
Confidence 445566666788999999999999999999863 11 25667777777776654
No 22
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=96.86 E-value=0.00046 Score=59.81 Aligned_cols=45 Identities=27% Similarity=0.316 Sum_probs=34.7
Q ss_pred cccc-cchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 002109 855 SLTD-LITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRF 910 (965)
Q Consensus 855 ~~~d-l~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~ 910 (965)
++.. -.+...||++|++.++.+||||. | +. ..|..||+||+.+.=
T Consensus 21 gl~~~~a~~~eIk~ayr~l~~~~HPDk~---g-~~-------~~f~~i~~Aye~L~~ 66 (71)
T 2guz_A 21 NLTENTLTKKKLKEVHRKIMLANHPDKG---G-SP-------FLATKINEAKDFLEK 66 (71)
T ss_dssp TCCTTTCCHHHHHHHHHHHHHHHCGGGT---C-CH-------HHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCC---C-CH-------HHHHHHHHHHHHHhh
Confidence 3443 36678999999999999999993 3 32 278999999987753
No 23
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=96.82 E-value=0.00047 Score=59.65 Aligned_cols=49 Identities=22% Similarity=0.337 Sum_probs=35.9
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCR 909 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r 909 (965)
|.-+++..-.+...||++|++.++.+||||... . ...|..|++||..+.
T Consensus 11 y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~--------~~~f~~i~~Ay~~L~ 59 (73)
T 2och_A 11 YDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--G--------AEQFKQISQAYEVLS 59 (73)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--C--------HHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--H--------HHHHHHHHHHHHHHC
Confidence 344455555678999999999999999999853 2 235777777776653
No 24
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.82 E-value=0.0006 Score=59.73 Aligned_cols=54 Identities=19% Similarity=0.171 Sum_probs=39.4
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFF 911 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~ 911 (965)
|.-+++..-.+...||++|++.++.+||||.... . .|...|..|++||+.+.=.
T Consensus 10 y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~--~-----~a~~~f~~i~~Ay~~L~d~ 63 (79)
T 2dn9_A 10 YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD--P-----KAKEKFSQLAEAYEVLSDE 63 (79)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC--T-----THHHHHHHHHHHHHHHHSH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--H-----HHHHHHHHHHHHHHHHCCH
Confidence 3444555556789999999999999999998742 1 2566777888887766433
No 25
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.66 E-value=0.001 Score=62.36 Aligned_cols=51 Identities=18% Similarity=0.283 Sum_probs=35.8
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYC 908 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~ 908 (965)
|.-+++..-.+...||++|++.++.+||||.... .. |...|..|++||..+
T Consensus 23 Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~------a~~~f~~i~~Ay~vL 73 (112)
T 2ctq_A 23 YTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PK------AVETFQKLQKAKEIL 73 (112)
T ss_dssp HHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-ST------HHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HH------HHHHHHHHHHHHHHH
Confidence 4556666667889999999999999999998742 11 344555555555443
No 26
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=96.27 E-value=0.0011 Score=62.95 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=18.8
Q ss_pred hhHhHHhhhccccccCcccc
Q 002109 863 AAVKKCYRKATLCIHPDKVQ 882 (965)
Q Consensus 863 ~~VKk~YrKA~l~vHPDK~~ 882 (965)
..||++||++++.+||||..
T Consensus 25 ~eIk~aYr~la~~~HPDk~~ 44 (114)
T 1gh6_A 25 PLMRKAYLKKCKEFHPDKGG 44 (114)
T ss_dssp HHHHHHHHHTTTTCCTTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCc
Confidence 89999999999999999964
No 27
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.0019 Score=58.51 Aligned_cols=46 Identities=26% Similarity=0.312 Sum_probs=32.1
Q ss_pred cCcccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHh
Q 002109 853 PVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYC 908 (965)
Q Consensus 853 ~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~ 908 (965)
-+++..-.+...||++|++.++.+||||... +.+ .|..|++||+.+
T Consensus 13 iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~~-------~f~~i~~Ay~~L 58 (92)
T 2o37_A 13 LLGVSPSANEQELKKGYRKAALKYHPDKPTG---DTE-------KFKEISEAFEIL 58 (92)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC---CHH-------HHHHHHHHHHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hHH-------HHHHHHHHHHHH
Confidence 3444445678999999999999999999853 223 455555555544
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=96.19 E-value=0.0029 Score=55.94 Aligned_cols=43 Identities=16% Similarity=0.204 Sum_probs=32.4
Q ss_pred chhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 002109 860 ITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFIL 913 (965)
Q Consensus 860 ~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~~ 913 (965)
.+...||++|++.++.+||||.. +. ..|..||+||+.++=.+.
T Consensus 25 a~~~eIk~aYr~la~~~HPDk~~----~~-------~~f~~i~~AYe~L~~~~~ 67 (79)
T 1faf_A 25 GDFGRMQQAYKQQSLLLHPDKGG----SH-------ALMQELNSLWGTFKTEVY 67 (79)
T ss_dssp TCHHHHHHHHHHHHHHSSGGGSC----CH-------HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCcCCCC----CH-------HHHHHHHHHHHHHhhHHH
Confidence 66799999999999999999942 22 347777787776654433
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=95.53 E-value=0.0021 Score=65.46 Aligned_cols=59 Identities=25% Similarity=0.389 Sum_probs=40.6
Q ss_pred cchhhhHhHHhhhccccccCccccccCCCHHHHHH-HHHHHHHHHHHHHHhhhhhhccccccccc
Q 002109 859 LITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYI-AEKVFDLLKVQQIYCRFFILLCLEGFNLT 922 (965)
Q Consensus 859 l~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~i-A~~vF~~Ln~a~~~~r~~~~~~~~~~~~~ 922 (965)
-++...||++||+..+.+||||... + .+++. ....|.+|.+...+..|-+.| ++|+.+.
T Consensus 29 ~a~~~eIk~aYr~la~~~HPDk~~~--a--~~~f~~i~~AY~vL~dp~~R~~Yd~~l-~~g~~~~ 88 (181)
T 3uo3_A 29 TIDQSRLRKEYRQLQAQHHPDMAQQ--G--SEQSSTLNQAYHTLKDPLRRSQYMLKL-LRNIDLT 88 (181)
T ss_dssp CCCHHHHHHHHHHHHHTCCTTSCCS--C--SSGGGSHHHHHHHHHSHHHHHHHHHHH-HHCCCTT
T ss_pred CCCHHHHHHHHHHHHHHhCcCCCcc--H--HHHHHHHHHHHHHHcChHHHHHHHHHH-HhCCCcc
Confidence 3566899999999999999999864 1 12222 566777777776677776543 1566554
No 30
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=94.83 E-value=0.01 Score=60.00 Aligned_cols=47 Identities=19% Similarity=0.321 Sum_probs=31.8
Q ss_pred cccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHh
Q 002109 855 SLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYC 908 (965)
Q Consensus 855 ~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~ 908 (965)
++..-.+...||++||+..+.+||||.... .. |...|..|++||+.+
T Consensus 9 ~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~------~~~~f~~i~~Ay~~L 55 (210)
T 3apq_A 9 GVSKTASSREIRQAFKKLALKLHPDKNPNN-PN------AHGDFLKINRAYEVL 55 (210)
T ss_dssp TCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TT------HHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hH------HHHHHHHHHHHHHHh
Confidence 333446778999999999999999998642 22 334455555555443
No 31
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=94.25 E-value=0.008 Score=66.50 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=0.0
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccc
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQ 883 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~ 883 (965)
|.-+++..-.+...||++||++.+.+||||...
T Consensus 31 Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~ 63 (329)
T 3lz8_A 31 YAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE 63 (329)
T ss_dssp ---------------------------------
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC
Confidence 455666666678999999999999999999864
No 32
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=93.65 E-value=0.033 Score=47.90 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=28.7
Q ss_pred chhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHh
Q 002109 860 ITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYC 908 (965)
Q Consensus 860 ~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~ 908 (965)
.+...|+++|++.+...|||| |++ -||+.+| |.|++++
T Consensus 19 a~~~~Ik~~yr~Lm~~nhPDk----GGS---~yl~~ki----~~Ake~l 56 (65)
T 2guz_B 19 LNMDKINNRFNYLFEVNDKEK----GGS---FYLQSKV----YRAAERL 56 (65)
T ss_dssp CSHHHHHHHHHHHHHHTCGGG----TCC---HHHHHHH----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCC----CCC---HHHHHHH----HHHHHHH
Confidence 677899999999999999999 444 5666555 4555444
No 33
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=93.34 E-value=0.052 Score=64.22 Aligned_cols=9 Identities=33% Similarity=0.940 Sum_probs=5.8
Q ss_pred ccccccccc
Q 002109 337 EDVWLTVSE 345 (965)
Q Consensus 337 ~dvwltvs~ 345 (965)
.+|||-|++
T Consensus 214 ~~l~LGV~~ 222 (575)
T 2i1j_A 214 TELWLGVDA 222 (575)
T ss_dssp CEEEEEECS
T ss_pred CEEEEEEcC
Confidence 467777664
No 34
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=92.88 E-value=0.23 Score=58.71 Aligned_cols=9 Identities=0% Similarity=0.102 Sum_probs=4.0
Q ss_pred HHhHHhHHH
Q 002109 813 HRIAETLDV 821 (965)
Q Consensus 813 ~~l~d~~~~ 821 (965)
..-.|.|..
T Consensus 536 ~t~~D~lh~ 544 (575)
T 2i1j_A 536 ETAMDKIHR 544 (575)
T ss_dssp CCHHHHHHH
T ss_pred cchhHHHHH
Confidence 333455443
No 35
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=92.01 E-value=0.071 Score=54.12 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=31.8
Q ss_pred hhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 002109 862 AAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYCRFFI 912 (965)
Q Consensus 862 ~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~r~~~ 912 (965)
...||++||++.+.+||||... .++=......|.+|.+.-.+..|-.
T Consensus 27 ~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~ 73 (174)
T 2pf4_E 27 IPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPD 73 (174)
T ss_dssp HHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhc
Confidence 5899999999999999999642 1222234667777777766666643
No 36
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=86.05 E-value=0.16 Score=61.06 Aligned_cols=61 Identities=15% Similarity=0.407 Sum_probs=25.7
Q ss_pred CccCcccccchhhhHhHHhhhccccccCccccccCCCHHHHH-HHHHHHHHHHHHHHHhhhhh
Q 002109 851 WQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKY-IAEKVFDLLKVQQIYCRFFI 912 (965)
Q Consensus 851 W~~v~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~-iA~~vF~~Ln~a~~~~r~~~ 912 (965)
|.-+++..-.+...||++||+..+.+||||..... ..++++ .....|.+|.+...+..|-.
T Consensus 24 y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~-~~~~~f~~i~~ay~~L~~~~~r~~yd~ 85 (780)
T 3apo_A 24 YSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNP-NAHGDFLKINRAYEVLKDEDLRKKYDK 85 (780)
T ss_dssp HHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTT
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh-HHHHHHHHHHHHHHHHcChHHHHHHHh
Confidence 44556666678899999999999999999985321 112221 13445555555555555543
No 37
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.83 E-value=0.59 Score=50.22 Aligned_cols=50 Identities=28% Similarity=0.300 Sum_probs=39.2
Q ss_pred cccccchhhhHhHHhhhccccccCccccccCCCHHHHHHHHHHHHHHHHHHHHh
Q 002109 855 SLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKVQQIYC 908 (965)
Q Consensus 855 ~~~dl~~~~~VKk~YrKA~l~vHPDK~~~~~~~~eqk~iA~~vF~~Ln~a~~~~ 908 (965)
++..--....++++|+++++.+|||+... .+.+-.|+..|..|++||+.+
T Consensus 389 g~~~~~~~~~~~~~y~~~~l~~~pd~~~~----~~~~~~a~~~~~~i~~ay~~L 438 (450)
T 2y4t_A 389 GVKRNAKKQEIIKAYRKLALQWHPDNFQN----EEEKKKAEKKFIDIAAAKEVL 438 (450)
T ss_dssp CSSTTCCTTHHHHHHHHHHHHSCGGGCCS----HHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCccCCHHHHHHHHHHHHHHhCCCCCCC----chHHHHHHHHHHHHHHHHHHh
Confidence 33333355889999999999999999863 344667899999999998865
No 38
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=79.33 E-value=78 Score=39.06 Aligned_cols=6 Identities=50% Similarity=0.584 Sum_probs=0.0
Q ss_pred CCCccc
Q 002109 743 SSTTNI 748 (965)
Q Consensus 743 sSs~ni 748 (965)
++..|+
T Consensus 836 ~sPinL 841 (861)
T 2zuo_A 836 SSPINL 841 (861)
T ss_dssp ------
T ss_pred CChHHH
Confidence 344444
No 39
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=45.95 E-value=65 Score=41.18 Aligned_cols=6 Identities=50% Similarity=0.994 Sum_probs=2.6
Q ss_pred CCCCCC
Q 002109 91 LPGFGR 96 (965)
Q Consensus 91 ~~Gfg~ 96 (965)
|.-||+
T Consensus 230 leaFGn 235 (1184)
T 1i84_S 230 LEAFGN 235 (1184)
T ss_dssp HTTTTE
T ss_pred HHHhcC
Confidence 344444
No 40
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=37.76 E-value=62 Score=41.35 Aligned_cols=8 Identities=25% Similarity=0.613 Sum_probs=3.3
Q ss_pred cccCCCCC
Q 002109 65 LLGNLGKK 72 (965)
Q Consensus 65 llgg~g~~ 72 (965)
||..||..
T Consensus 229 ileaFGnA 236 (1184)
T 1i84_S 229 ILEAFGNA 236 (1184)
T ss_dssp HHTTTTEE
T ss_pred HHHHhcCC
Confidence 34444433
No 41
>3v6i_B V-type ATP synthase, subunit (VAPC-therm); peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_G 3j0j_I
Probab=31.25 E-value=3.3e+02 Score=25.41 Aligned_cols=85 Identities=34% Similarity=0.367 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 002109 601 EARERAAAEARERAERAAAEARERANAEAREKEARERASVARTEAEALQRAERAAVQRAASEARERAAAEAR-ERAAAAA 679 (965)
Q Consensus 601 eareRae~EarEr~ek~~~E~rer~e~Eareree~Er~a~erae~Ear~kaEreakerae~Ear~rae~eA~-eraaaea 679 (965)
..++++....-|.+.+.++..-+.+++|++.-...-.......+++-+.+ ......+-..+++.+++.+++ -+..+..
T Consensus 12 AerE~~L~~~lE~Ar~eA~~~v~~AEAeA~ril~eAe~~a~~l~ae~r~~-~~~Et~ri~~eara~Aeaea~~v~~~A~~ 90 (105)
T 3v6i_B 12 AEKEKQLLERLEAAKKEAEERVKRAEAEAKALLEEAEAKAKALEAQYRER-ERAETEALLARYRERAEAEAKAVREKAMA 90 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhhh
Q 002109 680 RANQNQQ 686 (965)
Q Consensus 680 r~~~a~~ 686 (965)
+..++.+
T Consensus 91 r~~~Av~ 97 (105)
T 3v6i_B 91 RLDEAVA 97 (105)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
No 42
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=30.14 E-value=1.5e+03 Score=32.62 Aligned_cols=6 Identities=33% Similarity=0.523 Sum_probs=2.2
Q ss_pred hhhhcc
Q 002109 910 FFILLC 915 (965)
Q Consensus 910 ~~~~~~ 915 (965)
|++.+|
T Consensus 2482 Fs~~l~ 2487 (3245)
T 3vkg_A 2482 FALQLT 2487 (3245)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
Done!