Query         002110
Match_columns 965
No_of_seqs    373 out of 2073
Neff          7.1 
Searched_HMMs 29240
Date          Mon Mar 25 12:46:13 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002110hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2gso_A Phosphodiesterase-nucle 100.0 5.9E-29   2E-33  285.2  14.0  259   76-378     5-386 (393)
  2 4gtw_A Ectonucleotide pyrophos  99.9 1.3E-27 4.6E-32  297.4  16.3  194   77-294   109-327 (823)
  3 3lxq_A Uncharacterized protein  99.9 1.1E-25 3.9E-30  262.6  20.3  269   75-377    83-372 (450)
  4 3b5q_A Putative sulfatase YIDJ  99.9 1.4E-25 4.9E-30  264.1  18.6  271   76-379    15-363 (482)
  5 3ed4_A Arylsulfatase; structur  99.9 2.7E-25 9.1E-30  262.9  20.8  271   76-379    26-396 (502)
  6 1auk_A Arylsulfatase A; cerebr  99.9 6.9E-25 2.3E-29  258.7  19.9  270   77-379     2-347 (489)
  7 4fdi_A N-acetylgalactosamine-6  99.9 6.8E-25 2.3E-29  259.6  19.5  272   75-378     2-348 (502)
  8 3q3q_A Alkaline phosphatase; h  99.9 1.8E-25 6.1E-30  264.4  13.0  204   76-295    38-350 (565)
  9 2qzu_A Putative sulfatase YIDJ  99.9 1.1E-24 3.7E-29  257.2  19.4  270   76-379    26-391 (491)
 10 1p49_A Steryl-sulfatase; stero  99.9 2.9E-24 9.8E-29  257.7  23.4  271   77-379     5-412 (562)
 11 2vqr_A Putative sulfatase; pho  99.9 1.1E-24 3.8E-29  260.2  16.7  273   76-379    31-430 (543)
 12 1fsu_A N-acetylgalactosamine-4  99.9 1.4E-23 4.8E-28  247.7  20.8  269   77-379     3-342 (492)
 13 1hdh_A Arylsulfatase; hydrolas  99.9 1.8E-23   6E-28  249.4  20.8  269   77-379     4-447 (536)
 14 3nkq_A Ectonucleotide pyrophos  99.9 3.4E-24 1.1E-28  265.4  12.1  185   74-296   124-329 (831)
 15 2w8d_A Processed glycerol phos  99.9 2.2E-22 7.5E-27  234.0  17.3  269   74-375    28-338 (436)
 16 2w5q_A Processed glycerol phos  99.9 3.1E-22 1.1E-26  231.9  12.9  271   74-375    26-337 (424)
 17 1ei6_A Phosphonoacetate hydrol  99.8 6.5E-22 2.2E-26  227.9   6.4  203   75-301    13-251 (406)
 18 2w5v_A Alkaline phosphatase; p  99.8 4.7E-21 1.6E-25  218.4   7.3  246   75-362    32-374 (375)
 19 3szy_A Phosphonoacetate hydrol  99.8 1.2E-20 4.1E-25  217.8   7.3  198   76-297    22-260 (427)
 20 3m7v_A Phosphopentomutase; str  99.7 4.2E-18 1.4E-22  194.0  13.3  118  226-377   287-405 (413)
 21 3ot9_A Phosphopentomutase; alk  99.7 2.9E-17 9.9E-22  184.7  14.7  170  164-376   226-397 (399)
 22 2i09_A Phosphopentomutase; str  99.7 3.2E-16 1.1E-20  175.9  15.1  169  164-376   230-402 (403)
 23 1o98_A 2,3-bisphosphoglycerate  99.6 2.2E-14 7.6E-19  166.7  18.0  179  163-373   313-509 (511)
 24 3igz_B Cofactor-independent ph  99.5 1.5E-14   5E-19  167.6  11.9  137  212-373   398-550 (561)
 25 2zkt_A 2,3-bisphosphoglycerate  99.1 2.6E-10 9.1E-15  130.6  10.7  125  216-363   284-408 (412)
 26 3a52_A Cold-active alkaline ph  98.8 8.1E-09 2.8E-13  117.4   9.6  199   78-293     1-272 (400)
 27 3kd8_A 2,3-bisphosphoglycerate  98.5 1.9E-07 6.5E-12  105.8   9.2  116  218-360   283-399 (399)
 28 1k7h_A Alkaline phosphatase; h  98.2 1.9E-06 6.5E-11   99.6   8.6   69  215-293   290-359 (476)
 29 1zed_A Alkaline phosphatase; p  98.1 3.5E-06 1.2E-10   97.5   8.7   68  216-293   292-360 (484)
 30 3tg0_A Apase, alkaline phospha  98.0 1.1E-05 3.9E-10   91.9   9.6  117  215-361   302-448 (449)
 31 2x98_A Alkaline phosphatase; h  97.0 0.00093 3.2E-08   76.6   8.1   70  215-293   233-306 (431)
 32 2w0y_A APH, alkaline phosphata  96.6  0.0015 5.2E-08   74.9   5.8   69  216-293   277-349 (473)
 33 3e2d_A Alkaline phosphatase; c  95.3   0.015 5.3E-07   67.2   5.8   69  216-293   249-318 (502)
 34 2d1g_A Acid phosphatase; ACPA,  91.4     3.1  0.0001   48.3  16.1  223  107-362   149-450 (498)
 35 1ei6_A Phosphonoacetate hydrol  85.8    0.26 8.8E-06   55.8   1.9   42  296-356   364-405 (406)
 36 3szy_A Phosphonoacetate hydrol  72.3     1.3 4.5E-05   50.5   2.0   43  297-360   378-422 (427)
 37 3kd8_A 2,3-bisphosphoglycerate  31.3      21 0.00071   40.2   2.5   50   77-132     4-54  (399)
 38 4hf7_A Putative acylhydrolase;  20.4      74  0.0025   31.4   4.1   51  215-272    66-116 (209)

No 1  
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=99.96  E-value=5.9e-29  Score=285.22  Aligned_cols=259  Identities=19%  Similarity=0.250  Sum_probs=194.5

Q ss_pred             CCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccccc
Q 002110           76 AVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGN  155 (965)
Q Consensus        76 ~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~  155 (965)
                      +.+|||+|++|++|+|.+..           ..+|+|++|++ +|. .+.++++..||+|.|++.||+||.+|..||+..
T Consensus         5 ~~pnvv~I~~D~l~~~~l~~-----------~~tP~ld~La~-~G~-~f~~~~~~~ps~~~psrasl~TG~~p~~hGi~~   71 (393)
T 2gso_A            5 TPHALLLISIDGLRADMLDR-----------GITPNLSHLAR-EGV-RARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVH   71 (393)
T ss_dssp             CCCEEEEEEETTCCGGGGGS-----------SCCHHHHHHHH-HSE-EESCEECCSSCCHHHHHHHHHHCCCHHHHSCCS
T ss_pred             CCCeEEEEEECCCCcccccc-----------cCCchHHHHHh-CCe-eccCceeCCCCCcHHHHHHHHhCCCHHHcCCCC
Confidence            45799999999999998741           36899999995 443 223588999999999999999999999999876


Q ss_pred             cCC-CCc---C--------------ChhhHHHHHHHCCCeEEEEeccccccccCCCccccCC--CCCcccCCCcccchHH
Q 002110          156 SFG-APA---I--------------LEDNLIHQLASNGKRVVMMGDDTWVQLFPHHFKKSYP--YPSFNVKDLHTVDNGC  215 (965)
Q Consensus       156 nf~-~~~---i--------------~~d~l~~ql~~~G~k~~~~Gd~tW~~LfP~~f~~~~~--~~sf~v~D~~~vD~~v  215 (965)
                      |.. .+.   .              ..++.++.++++|+++..+.   |..-... +....+  +..|+   -...++..
T Consensus        72 n~~~~~~~~~~~~~~y~t~~~gk~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~  144 (393)
T 2gso_A           72 NSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWS---WPGSEAA-IKGVRPSQWRHYQ---KGVRLDTR  144 (393)
T ss_dssp             SSEEETTTEEECTTCHHHHTCGGGCCSCCHHHHHHHTTCEEEESS---CTTTTSC-BTTBCCSBCCCCC---TTCCHHHH
T ss_pred             CccCCCCCCceecCCccccccCccccCCcceechhhCCccceEEe---CCCcccc-cCCcCCccccCcC---CCCCHHHH
Confidence            521 010   0              11245667788898876542   3210000 000000  00111   01124456


Q ss_pred             HHHHHHHHh---cCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCC
Q 002110          216 IEHLLPSLY---EEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHG  292 (965)
Q Consensus       216 ~~~l~~~L~---~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHG  292 (965)
                      ++++.++++   +++|+++++|+..+|+.+|.+||++++|.++++++|+.|++|++.|++.    |+.+||+||++||||
T Consensus       145 ~~~a~~~l~~~~~~~P~fl~~~~~~~d~~~h~~g~~~~~y~~~i~~~D~~ig~ll~~L~~~----g~~~nT~vi~tSDHG  220 (393)
T 2gso_A          145 VDAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRD----GTRARTNIIVVSDHG  220 (393)
T ss_dssp             HHHHHHHHHCCGGGCEEEEEEEECHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHHHHHH----TCGGGEEEEEECSCC
T ss_pred             HHHHHHHHhccCCCCCeEEEEecCCCCccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEEEcCCC
Confidence            677777774   4589999999999999999999999999999999999999999999987    578999999999999


Q ss_pred             CCC-----------------------------------------------------------------------------
Q 002110          293 QTI-----------------------------------------------------------------------------  295 (965)
Q Consensus       293 m~~-----------------------------------------------------------------------------  295 (965)
                      +..                                                                             
T Consensus       221 ~~~~~~~~~i~l~~~l~~~~~~~~~~g~~~~i~~~~~~~~~~~~~l~~~~~~~~v~~~~~l~~~~~~~~~~r~gdl~v~~  300 (393)
T 2gso_A          221 MAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQM  300 (393)
T ss_dssp             CEEECTTCEEEGGGTSCTTTEEESCCBSEEEEEECTTCHHHHHHHHSEECSSEEEEEGGGSCGGGCCSCSTTSCSEEEEE
T ss_pred             CCCCCCCcEEeHHHccCHHHeEEEcCCCeEEEEeCCcchHHHHHHHhcCCCCeEEEEcccCchhhcCCCCCCCCCEEEEe
Confidence            932                                                                             


Q ss_pred             --------------------CCCCCC-CCCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHH
Q 002110          296 --------------------NGDHGG-GSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAAT  354 (965)
Q Consensus       296 --------------------~G~HGg-~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPT  354 (965)
                                          .|.||+ ..++|+++||++++|+++++..                   ...++.+||+||
T Consensus       301 ~~g~~~~~~~~~~~~~~~~~~g~HG~d~~~~~~~vp~i~~gp~i~~g~~-------------------~~~~~~~Di~PT  361 (393)
T 2gso_A          301 HEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKT-------------------LPGFDNVDVYAL  361 (393)
T ss_dssp             CTTCEEECHHHHHHSCTTSCEEECCSCTTSGGGCBCEEEESTTBCSSEE-------------------ECCEEGGGHHHH
T ss_pred             eCCEEEEeccccccccCCCCCcCCCCCCCChhhhccceeECCCccCCCc-------------------CCCcchhhHHHH
Confidence                                166777 6677899999999999654321                   236899999999


Q ss_pred             HHHhhCCCCCCCCCCCC--cHHhhcC
Q 002110          355 VSALLGVPFPFGSIGRV--SPELYTL  378 (965)
Q Consensus       355 La~LlGipiP~~~~G~~--i~e~l~~  378 (965)
                      |+.++|+++|.+ .|+.  +.+++..
T Consensus       362 i~~llgi~~p~~-dG~~~~l~~~l~~  386 (393)
T 2gso_A          362 MSRLLGIPAAPN-DGNPATLLPALRM  386 (393)
T ss_dssp             HHHHHTCCCCSC-SSCTTTTGGGBCC
T ss_pred             HHHHhCCCCCCC-CCChHHHHHHhcC
Confidence            999999999877 9999  9999853


No 2  
>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*
Probab=99.95  E-value=1.3e-27  Score=297.40  Aligned_cols=194  Identities=17%  Similarity=0.174  Sum_probs=144.7

Q ss_pred             CCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccccc
Q 002110           77 VDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGNS  156 (965)
Q Consensus        77 ~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~n  156 (965)
                      ..+||+|++||+|+|++..         +.+.+|||++|++ +|. .+-++++..||+|.|++.||+||.+|..||+..|
T Consensus       109 rP~vIlI~iDglR~Dyl~~---------~~~~TPnLdrLA~-~Gv-~f~n~~~~~PSvc~PsraSLlTG~yP~~hGI~~N  177 (823)
T 4gtw_A          109 SPPTLLFSLDGFRAEYLHT---------WGGLLPVISKLKN-CGT-YTKNMRPMYPTKTFPNHYSIVTGLYPESHGIIDN  177 (823)
T ss_dssp             SCCEEEEEETTCCHHHHHH---------SGGGCHHHHHHHH-TSE-EESCEECCSSCCHHHHHHHHHHCCCHHHHSCCCS
T ss_pred             CCCEEEEEcCCCCHHHhCc---------CcccChHHHHHHH-CCc-ccCCeEECCCCChHHHHHHHHHcCCHHHcCcccc
Confidence            4469999999999999852         1257999999995 553 3345899999999999999999999999999765


Q ss_pred             CC------------C------CcCChhhHHHHHHHCCCeEEEEec----cccccccCCCccccCCCCCcccCCCcccchH
Q 002110          157 FG------------A------PAILEDNLIHQLASNGKRVVMMGD----DTWVQLFPHHFKKSYPYPSFNVKDLHTVDNG  214 (965)
Q Consensus       157 f~------------~------~~i~~d~l~~ql~~~G~k~~~~Gd----~tW~~LfP~~f~~~~~~~sf~v~D~~~vD~~  214 (965)
                      ..            .      .......+++.++++|++++.+..    ..+....|..+..      +   +.....+.
T Consensus       178 ~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ta~~~wpgs~~~~~~~~p~~~~~------~---~~~~~~~~  248 (823)
T 4gtw_A          178 KMYDPKMNASFSLKSKEKFNPLWYKGQPIWVTANHQEVKSGTYFWPGSDVEIDGILPDIYKV------Y---NGSVPFEE  248 (823)
T ss_dssp             SEEETTTTEEECSSSGGGGCTTTCCSCCHHHHHHHTTCCEECSSCTTSSSCBTTBCCSBCCC------C---CTTSCHHH
T ss_pred             eeecCCcCccccccccccCCCccccCCchhhhHHhCCCeeEEEecCCCcccccCcCCccccc------c---CCCCCHHH
Confidence            21            0      012234577888999999875410    0011112221111      1   11111223


Q ss_pred             HHHHHHHHH---hcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCC
Q 002110          215 CIEHLLPSL---YEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDH  291 (965)
Q Consensus       215 v~~~l~~~L---~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDH  291 (965)
                      .++.+.+++   ++++|+++++|+.++|+.||.+||++++|.++++++|+.||+|++.|+++    |+.+||+||++|||
T Consensus       249 ~~~~~~~~l~~~~~~~P~fl~~y~~~pD~~gH~~Gp~s~e~~~~i~~vD~~IG~ll~~L~~~----gl~dnT~VI~tSDH  324 (823)
T 4gtw_A          249 RILAVLEWLQLPSHERPHFYTLYLEEPDSSGHSHGPVSSEVIKALQKVDRLVGMLMDGLKDL----GLDKCLNLILISDH  324 (823)
T ss_dssp             HHHHHHHHTTSCTTTCCSEEEEEECTTHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHT----TCTTSCEEEEECSC
T ss_pred             HHHHHHHHHHhcccCCCeEEEECCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEEEcCC
Confidence            345566666   35789999999999999999999999999999999999999999999987    57899999999999


Q ss_pred             CCC
Q 002110          292 GQT  294 (965)
Q Consensus       292 Gm~  294 (965)
                      ||.
T Consensus       325 Gm~  327 (823)
T 4gtw_A          325 GME  327 (823)
T ss_dssp             CCE
T ss_pred             CCC
Confidence            984


No 3  
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=99.93  E-value=1.1e-25  Score=262.62  Aligned_cols=269  Identities=13%  Similarity=0.123  Sum_probs=197.3

Q ss_pred             CCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccc
Q 002110           75 PAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVG  154 (965)
Q Consensus        75 ~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~  154 (965)
                      .+.+|||+|++|++|+|.+..   ++.    ...+|+|++|++ +|. .+.++++ .++.|.|++.+|+||.+|..++..
T Consensus        83 ~~~pNIvlI~~Dsl~~~~l~~---~g~----~~~tP~ld~La~-~g~-~F~~~ys-~~~~t~ps~~sllTG~~p~~~~~~  152 (450)
T 3lxq_A           83 GKRKNLVILLQESLGAQFVGS---LGG----LPLTPNLDELMQ-EGW-QFTQMYA-TGTRSVRGIEAVTTGFPPSPSRAV  152 (450)
T ss_dssp             SSCCEEEEEEETTCCGGGCGG---GTS----CSCCHHHHHHHH-TSE-EESSEEC-SCSSHHHHHHHHHTCCCCCSSCCT
T ss_pred             CCCCcEEEEEeCCCCcchhhh---cCC----CCCCccHHHHHh-cCc-ccccccC-CCCCChHHHHHHHhCCCCCCCCce
Confidence            456899999999999998753   222    257999999995 453 3334666 566899999999999999998865


Q ss_pred             ccCCCCcCChhhHHHHHHHCCCeEEEE--ecccccc---ccC-CCccccCCCCCcccC----CCcccchHHHHHHHHHHh
Q 002110          155 NSFGAPAILEDNLIHQLASNGKRVVMM--GDDTWVQ---LFP-HHFKKSYPYPSFNVK----DLHTVDNGCIEHLLPSLY  224 (965)
Q Consensus       155 ~nf~~~~i~~d~l~~ql~~~G~k~~~~--Gd~tW~~---LfP-~~f~~~~~~~sf~v~----D~~~vD~~v~~~l~~~L~  224 (965)
                      .+........+++.+.|+++||+++++  |+..|..   .++ ..|++..+...|...    .....|+.+++.+.++++
T Consensus       153 ~~~~~~~~~~~tl~~~Lk~~GY~T~~~~gg~~~~~~~~~~~~~~Gfd~~~~~~~~~~~~~~~~~g~~d~~~~~~~~~~l~  232 (450)
T 3lxq_A          153 VKLSKSQTGFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGNGFDQIVEEKNYTNPGFVGSWGVSDEDLYNKADEEFE  232 (450)
T ss_dssp             TSCSGGGSSBCCHHHHHHHTTCEEEEEESSCTTGGGHHHHHHHTTCCEEECGGGCSSCSCEETTEECHHHHHHHHHHHHH
T ss_pred             eecCCCCcccccHHHHHHhcCCCeEEEeCCCcCcCchhhhhhhCCCCEEecccccCCCcccCCCCCCHHHHHHHHHHHHH
Confidence            443322334578999999999999998  6655432   111 123221111111111    111236777888877773


Q ss_pred             ----cCCCcEEEEEcCCcCc-------cCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCC
Q 002110          225 ----EEDWDVLIAHFLGVDH-------AGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQ  293 (965)
Q Consensus       225 ----~~~~dllilh~lgvD~-------~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm  293 (965)
                          +++|.++++|+.++++       ..|.++.....|.++++++|..|+++++.+++.    |+.+||+||++||||+
T Consensus       233 ~~~~~~~Pffl~l~~~~~H~P~~~p~~~~~~~~~~~~~y~~~v~~~D~~ig~~l~~L~~~----g~~~nTlvI~tsDHG~  308 (450)
T 3lxq_A          233 RLSKGDKPFFSLVFTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKS----SYWDDTIFIVIADHDA  308 (450)
T ss_dssp             HHTTSSSCEEEEEECCSSSTTCCCCSSSSCCSSSSSSCHHHHHHHHHHHHHHHHHHHTTS----SSGGGEEEEEEESCCS
T ss_pred             HhccCCCCEEEEecCCCCcCCCccCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHhC----CCcCCeEEEEECCCCc
Confidence                4679999999987543       334455556789999999999999999999986    5789999999999998


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCCCCCCCcH
Q 002110          294 TINGDHGGGSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFGSIGRVSP  373 (965)
Q Consensus       294 ~~~G~HGg~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~~~G~~i~  373 (965)
                      . .++|+....+++++|+++++|+.+++                   .....++|+||+|||+.++|++.|....|+.+.
T Consensus       309 ~-~~~~~~~~~~~~~vP~ii~~p~~~~~-------------------~~~~~~s~~Di~PTll~l~G~~~~~~~~G~sL~  368 (450)
T 3lxq_A          309 R-VFGANLVPVKHFHIPALIIGKDIQPR-------------------KDDRIANNIDMPPTLLSLIGVDAKTPMIGRDLT  368 (450)
T ss_dssp             C-CCSCCSCCGGGGEECEEEECTTCCCE-------------------EECCCEEGGGHHHHHHHHTTCCEEECCCSCCTT
T ss_pred             c-cCCCCCCccccceEeEEEECCCCCCc-------------------eeCCccchhhHHHHHHHHhCCCCCCCccCeeCC
Confidence            4 46677666678999999999885432                   124568999999999999999999999999887


Q ss_pred             Hhhc
Q 002110          374 ELYT  377 (965)
Q Consensus       374 e~l~  377 (965)
                      +.++
T Consensus       369 ~~l~  372 (450)
T 3lxq_A          369 KPLA  372 (450)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            7653


No 4  
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.93  E-value=1.4e-25  Score=264.07  Aligned_cols=271  Identities=18%  Similarity=0.171  Sum_probs=193.7

Q ss_pred             CCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccccc
Q 002110           76 AVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGN  155 (965)
Q Consensus        76 ~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~  155 (965)
                      +..|||+|++|++|+|.+..   ++.+   ...+|+|++|++ +|. .+.++++..| +|.|++.+|+||.+|..+|+..
T Consensus        15 ~~PNIv~I~~Ddl~~~~l~~---~G~~---~~~TPnld~La~-~G~-~F~~~y~~~~-~c~PSrasllTG~~p~~~g~~~   85 (482)
T 3b5q_A           15 EKPNFLIIQCDHLTQRVVGA---YGQT---QGCTLPIDEVAS-RGV-IFSNAYVGCP-LSQPSRAALWSGMMPHQTNVRS   85 (482)
T ss_dssp             CCCEEEEEEETTCCTTTSGG---GSSC---CSSCHHHHHHHH-TSE-EBSCBBCSCS-SHHHHHHHHHHTCCHHHHTCCS
T ss_pred             CCCCEEEEEeCCCCcccccc---CCCC---CCCCchHHHHHh-cCe-EEeceEcCCC-CcHHHHHHHHhCCCcccCCCcc
Confidence            35699999999999987642   3332   157999999995 553 3445777666 6889999999999999999876


Q ss_pred             cCCCC-----cCChhhHHHHHHHCCCeEEEEeccccccc-cCCCccccC-CCCCcccCCC-----cccchHHHHHHHHHH
Q 002110          156 SFGAP-----AILEDNLIHQLASNGKRVVMMGDDTWVQL-FPHHFKKSY-PYPSFNVKDL-----HTVDNGCIEHLLPSL  223 (965)
Q Consensus       156 nf~~~-----~i~~d~l~~ql~~~G~k~~~~Gd~tW~~L-fP~~f~~~~-~~~sf~v~D~-----~~vD~~v~~~l~~~L  223 (965)
                      |....     ...+.++.+.|+++||+++++|+  |... ....|+... +.+.|...+.     ...|+.+++++.++|
T Consensus        86 ~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~Gk--wh~~g~~~GFd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l  163 (482)
T 3b5q_A           86 NSSEPVNTRLPENVPTLGSLFSESGYEAVHFGK--THDMGSLRGFKHKEPVAKPFTDPEFPVNNDSFLDVGTCEDAVAYL  163 (482)
T ss_dssp             SCCTTTSCCCCTTSCCHHHHHHHTTCEEEEEEC--CCCTTTTTTSEEECCCCCCCCCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cCCccccccCCCCcchHHHHHHHcCCeEEEEee--ccCCCCCCCCcccCCCCCCCcCCcCCcCCcccccHHHHHHHHHHH
Confidence            53221     23567899999999999999997  6520 112233210 0011111110     012455667777888


Q ss_pred             hc--CCCcEEEEEcCCcCccC-----------------------------ccCCCC------------------------
Q 002110          224 YE--EDWDVLIAHFLGVDHAG-----------------------------HILGVD------------------------  248 (965)
Q Consensus       224 ~~--~~~dllilh~lgvD~~G-----------------------------H~~Gp~------------------------  248 (965)
                      ++  ++|.++++++.+++..-                             +.|.+.                        
T Consensus       164 ~~~~~~Pffl~~~~~~pH~P~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~y~~~~~~~~~~~~~~~~~~p~~~~~~~~  243 (482)
T 3b5q_A          164 SNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRMTQAAHWNEENY  243 (482)
T ss_dssp             TSCSCSSEEEEEEECTTTTHHHHHHHTCSSCCCCCCSSCCCCCCTTCSCSCGGGSCHHHHTHHHHCHHHHHHTTCCHHHH
T ss_pred             HhCCCCCeEEEECCCCCcCcccccccccccccccccccccccCCCchhHHhhccccccCcccccccccccCCcccCHHHH
Confidence            63  68999999998765321                             122221                        


Q ss_pred             ---CHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCCCCCC------CCCCCCcEEEEEEEcCCCC
Q 002110          249 ---SVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTINGDHG------GGSAEEVETSVFAMSFKKP  319 (965)
Q Consensus       249 ---s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~G~HG------g~s~~E~~vpL~~~sp~~~  319 (965)
                         ...|.++++++|+.||+|++.|++.    |+.|||+||++||||.. .|+||      ...++.+++||++++|+..
T Consensus       244 ~~~~~~Y~~~i~~~D~~vG~ll~~L~~~----g~~dnTiVIftSDHG~~-~g~~g~~gk~~~~~e~~~rVPlii~~Pg~~  318 (482)
T 3b5q_A          244 RHYIAAFQHYTKMVSKQVDSVLKALYST----PAGRNTIVVIMADHGDG-MASHRMVTKHISFYDEMTNVPFIFAGPGIK  318 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTS----TTGGGEEEEEEESCCCC-TTGGGCCSCSSCCCHHHHBCCEEEESTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCcCCeEEEEECCCCcc-cccccccccCCccccccceeeEEEECCCCC
Confidence               1357889999999999999999986    68899999999999984 45554      2234458999999999865


Q ss_pred             CCCCCCCCCCCcccccccccccccCcccc--ccHHHHHHHhhCCCCCCCCCCCCcHHhhcCC
Q 002110          320 PSTMPSEFDTSSCEMDLDQKKTCISSFQQ--LDFAATVSALLGVPFPFGSIGRVSPELYTLG  379 (965)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~q--iDiaPTLa~LlGipiP~~~~G~~i~e~l~~~  379 (965)
                      +...                 .....+++  +||+|||+.++|+++|....|+++.+++...
T Consensus       319 ~~g~-----------------~~~~~vs~~~~Di~PTll~laG~~~p~~~dG~sl~~~l~g~  363 (482)
T 3b5q_A          319 QQKK-----------------PVDHLLTQPTLDLLPTLCDLAGIAVPAEKAGISLAPTLRGE  363 (482)
T ss_dssp             CCSS-----------------CBCSSCBCHHHHHHHHHHHHHTCCCCTTCCCCCCHHHHTTC
T ss_pred             CCCc-----------------EeccccccccccHHHHHHHHhCCCCCCCCCCccHHHHhcCC
Confidence            4110                 12456899  9999999999999999999999999998754


No 5  
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=99.93  E-value=2.7e-25  Score=262.89  Aligned_cols=271  Identities=17%  Similarity=0.191  Sum_probs=190.5

Q ss_pred             CCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccccc
Q 002110           76 AVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGN  155 (965)
Q Consensus        76 ~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~  155 (965)
                      +..|||+|++|++|+|.+..   ++.+   ...+|+|++|++ +|. .+-++++..| +|.|++.+|+||.+|..||+..
T Consensus        26 ~~PNIv~I~~Ddl~~~~l~~---~g~~---~~~TPnld~La~-~G~-~f~~~y~~~~-~c~PSrasllTG~~p~~~G~~~   96 (502)
T 3ed4_A           26 KQPNLVIIMADDLGYGDLAT---YGHQ---IVKTPNIDRLAQ-EGV-KFTDYYAPAP-LSSPSRAGLLTGRMPFRTGIRS   96 (502)
T ss_dssp             -CCEEEEEEESSCCTTSSGG---GTCS---SCCCHHHHHHHH-TSE-EESSEECSSS-SHHHHHHHHHHTSCGGGGTCSS
T ss_pred             CCCCEEEEEeCCCCCCcccc---CCCC---CCCCccHHHHHh-CCc-EecCcccCCC-ccHHHHHHHHHcCChhhcCCcc
Confidence            45799999999999987752   3322   157999999995 553 3445787777 6779999999999999999865


Q ss_pred             cCCC-----CcCChhhHHHHHHHCCCeEEEEecccccc---c------cCC--CccccCCCC-Cc---------------
Q 002110          156 SFGA-----PAILEDNLIHQLASNGKRVVMMGDDTWVQ---L------FPH--HFKKSYPYP-SF---------------  203 (965)
Q Consensus       156 nf~~-----~~i~~d~l~~ql~~~G~k~~~~Gd~tW~~---L------fP~--~f~~~~~~~-sf---------------  203 (965)
                      +...     -...+.++.+.|+++||+++++|+  |.-   -      .|.  .|+...+.. .+               
T Consensus        97 ~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~Gk--wh~~~~~~~~~~~~p~~~GFd~~~~~~~~~~~~~~~~~~~~~~~~  174 (502)
T 3ed4_A           97 WIPSGKDVALGRNELTIANLLKAQGYDTAMMGK--LHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRY  174 (502)
T ss_dssp             CCCTTSSCCSCTTCCCHHHHHHTTTCEEEEEEE--CCSSSCTTCTTSCCTTTTTCSEEEEECSSSCCCHHHHTCCSSSCB
T ss_pred             ccCCCCcCCCCcchhHHHHHHHHcCCeEEEECh--hcCCCCCCCCCCCCcccCCCCeeeccccccccccccccccccccc
Confidence            4211     123467899999999999999987  431   1      111  122111000 00               


Q ss_pred             ---ccCCC-----------cccchHHHHHHHHHHhc---CCCcEEEEEcCCcCccCcc-------CCC------------
Q 002110          204 ---NVKDL-----------HTVDNGCIEHLLPSLYE---EDWDVLIAHFLGVDHAGHI-------LGV------------  247 (965)
Q Consensus       204 ---~v~D~-----------~~vD~~v~~~l~~~L~~---~~~dllilh~lgvD~~GH~-------~Gp------------  247 (965)
                         ...++           ...|+.+++.+.++|++   ++|.++++++..+++.-+.       |.+            
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~PfFl~~~~~~pH~P~~~p~~~~~~y~~~~~~~~~~~p~~  254 (502)
T 3ed4_A          175 GMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTEVHSPLASPKKYLDMYSQYMSAYQKQHPDL  254 (502)
T ss_dssp             CCCCCCSCEETTEECCCCSSCHHHHHHHHHHHHHHTCCSSCCEEEEEECCTTSSSCCCCHHHHHTTGGGBCHHHHHSTTB
T ss_pred             cccCccccccCCcccCCCCcccHHHHHHHHHHHHHhCCCCCCEEEEeCCCCCcCCCCCCHHHHHHhhhhhhhhcccCccc
Confidence               00000           01345567778888853   4799999999988764331       110            


Q ss_pred             -----------CCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCC-----------CCCCCCC----
Q 002110          248 -----------DSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQT-----------INGDHGG----  301 (965)
Q Consensus       248 -----------~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~-----------~~G~HGg----  301 (965)
                                 ....|.++++++|+.||+|++.|++.    |+.|||+||++||||..           ..|+||+    
T Consensus       255 ~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~----g~~dnTlVIftSDHG~~~~~~~~~~~~~~~g~~~~~~g~  330 (502)
T 3ed4_A          255 FYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAM----GEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGR  330 (502)
T ss_dssp             CGGGCTTSCCCBSHHHHHHHHHHHHHHHHHHHHHHHT----TCGGGEEEEEEESSCCCCSCCCSGGGTTCCCCCTTCSCC
T ss_pred             cccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHc----CCcCCeEEEEeCCCCCCccccccccccccccCCCcccCC
Confidence                       12468999999999999999999987    58899999999999952           1233332    


Q ss_pred             ---CCCCCcEEEEEEEcCCC-CCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCC--CCCCCCcHHh
Q 002110          302 ---GSAEEVETSVFAMSFKK-PPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPF--GSIGRVSPEL  375 (965)
Q Consensus       302 ---~s~~E~~vpL~~~sp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~--~~~G~~i~e~  375 (965)
                         ..++.+++||++++|+. +++.                  .....++++||+|||+.++|+++|.  ...|+++.++
T Consensus       331 k~~~~e~~~rVPlii~~Pg~i~~g~------------------~~~~~v~~~Di~PTll~laGi~~p~~~~~dG~sl~~~  392 (502)
T 3ed4_A          331 KDNLWEGGIRVPAIIKYGKHLPQGM------------------VSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPV  392 (502)
T ss_dssp             TTCCSHHHHBCCEEEEETTSSCTTE------------------EECSCEEGGGHHHHHHHHHTCCCCSSSCCCCCCCHHH
T ss_pred             CCCccCcceEeeEEEEeCCcCCCCC------------------EECCeeEEehHHHHHHHHhCCCCCCCCCCCCcCHHHH
Confidence               23445899999999984 3321                  1245799999999999999999986  5799999999


Q ss_pred             hcCC
Q 002110          376 YTLG  379 (965)
Q Consensus       376 l~~~  379 (965)
                      +...
T Consensus       393 l~~~  396 (502)
T 3ed4_A          393 LEQK  396 (502)
T ss_dssp             HTTC
T ss_pred             hcCC
Confidence            9653


No 6  
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=99.92  E-value=6.9e-25  Score=258.75  Aligned_cols=270  Identities=18%  Similarity=0.199  Sum_probs=190.6

Q ss_pred             CCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccc-c
Q 002110           77 VDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVG-N  155 (965)
Q Consensus        77 ~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~-~  155 (965)
                      ..|||+|++|++|+|.+.   .++..   ...+|+|++|++ +|. .+-++++..| +|.|++.+|+||.+|..+|+. .
T Consensus         2 kPNIv~I~~Ddl~~~~l~---~~G~~---~~~TPnld~La~-~G~-~F~~~y~~~~-~c~PSRasllTG~~p~~~g~~~~   72 (489)
T 1auk_A            2 PPNIVLIFADDLGYGDLG---CYGHP---SSTTPNLDQLAA-GGL-RFTDFYVPVS-LXTPSRAALLTGRLPVRMGMYPG   72 (489)
T ss_dssp             CCEEEEEEESSCCTTTSG---GGTCS---SCCCHHHHHHHH-TSE-EESSEECSSS-SHHHHHHHHHHSSCGGGGTCCSS
T ss_pred             CCeEEEEEeCCCCCcccC---cCCCC---CCCCcHHHHHHh-cCc-EeeccccCCC-CCChHHHHHHHCCCccccCCcCC
Confidence            369999999999998764   23332   147999999995 553 3445787776 788999999999999999987 5


Q ss_pred             cCCC-----CcCChhhHHHHHHHCCCeEEEEecccccc-------ccCC--CccccCCCC----------C--cc-----
Q 002110          156 SFGA-----PAILEDNLIHQLASNGKRVVMMGDDTWVQ-------LFPH--HFKKSYPYP----------S--FN-----  204 (965)
Q Consensus       156 nf~~-----~~i~~d~l~~ql~~~G~k~~~~Gd~tW~~-------LfP~--~f~~~~~~~----------s--f~-----  204 (965)
                      |+..     -...+.++.+.|+++||+++++|+  |+-       ..|.  .|+...+.+          .  +.     
T Consensus        73 ~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~GK--wh~g~~~~~~~~p~~~GFd~~~g~~~~~~~~~~~~~~~~~~~~~~  150 (489)
T 1auk_A           73 VLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGK--WHLGVGPEGAFLPPHQGFHRFLGIPYSHDQGPCQNLTCFPPATPC  150 (489)
T ss_dssp             CCCTTBSCBSCTTSCCHHHHHHTTTCEEEEEEC--CCSBCCGGGTTSGGGGTCSEEEECSSCTTSSBCTTSEEETTTEEC
T ss_pred             CcCCCccCCCCCccchHHHHHHHCCCeEEEEec--ccCCCCCCCCCCCCcCCCCccccCCcccccccccccccCCccccc
Confidence            5432     123467899999999999999997  531       1121  122111100          0  00     


Q ss_pred             -------------cC---------CCcccchHHHHHHHHHHh----cCCCcEEEEEcCCcCccCc---cCCC--CCHHHH
Q 002110          205 -------------VK---------DLHTVDNGCIEHLLPSLY----EEDWDVLIAHFLGVDHAGH---ILGV--DSVPMI  253 (965)
Q Consensus       205 -------------v~---------D~~~vD~~v~~~l~~~L~----~~~~dllilh~lgvD~~GH---~~Gp--~s~~~~  253 (965)
                                   ..         +....++.+++++.++|+    +++|.++++++..++..-+   .+..  ....|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~kPfFl~~~~~~pH~P~~~p~~~~~~~~~~~Y~  230 (489)
T 1auk_A          151 DGGCDQGLVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFG  230 (489)
T ss_dssp             TTCBSCSSCCCCEEETTEEEEBSCCGGGHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTSSSCCCCTTTTTTSSSHHHH
T ss_pred             cccccccccCCccccCCccccCCCccccchHHHHHHHHHHHHhcccCCCCEEEEeCCCCCCCCCCCChhhccccchhHHH
Confidence                         00         001123445677777774    3579999999988754322   2211  246799


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCC-----CCCCCCC-----C--CCCcEEEEEEEcCCCCCC
Q 002110          254 EKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTI-----NGDHGGG-----S--AEEVETSVFAMSFKKPPS  321 (965)
Q Consensus       254 ~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~-----~G~HGg~-----s--~~E~~vpL~~~sp~~~~~  321 (965)
                      ++++++|+.||+|++.|++.    |+.|||+||++||||...     .|.||..     +  ++.+++||++++|+..+.
T Consensus       231 ~~v~~~D~~vG~ll~~L~~~----gl~dnTiViftSDhG~~~~~~~~~g~~g~~~~~K~~~~e~g~rVPlii~~Pg~i~~  306 (489)
T 1auk_A          231 DSLMELDAAVGTLMTAIGDL----GLLEETLVIFTADNGPETMRMSRGGCSGLLRCGKGTTYEGGVREPALAFWPGHIAP  306 (489)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT----TCGGGEEEEEEESSCCCGGGGGGSCCCTTSCCCTTSSSHHHHBCCCEEECTTTSCS
T ss_pred             HHHHHHHHHHHHHHHHHHHc----CCcCCeEEEEeCCCCccccccCCCCcccccCCCccCccCCceeEEEEEecCCCCCC
Confidence            99999999999999999986    588999999999999852     3555421     2  233899999999984321


Q ss_pred             CCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCC-CCCCCcHHhhcCC
Q 002110          322 TMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFG-SIGRVSPELYTLG  379 (965)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~-~~G~~i~e~l~~~  379 (965)
                      .                  .....++++||+|||+.++|+++|.. ..|+++.+++...
T Consensus       307 g------------------~~~~~vs~~Di~PTll~laG~~~p~~~~dG~sl~~~l~g~  347 (489)
T 1auk_A          307 G------------------VTHELASSLDLLPTLAALAGAPLPNVTLDGFDLSPLLLGT  347 (489)
T ss_dssp             E------------------EECSCEEGGGHHHHHHHHHTCCCCSSCCSCCCCHHHHHTS
T ss_pred             C------------------ccCCceeeehHHHHHHHHhCCCCCCCCCCCcCHHHHhcCC
Confidence            1                  12457999999999999999999953 5999999998653


No 7  
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=99.92  E-value=6.8e-25  Score=259.64  Aligned_cols=272  Identities=15%  Similarity=0.185  Sum_probs=185.0

Q ss_pred             CCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccc
Q 002110           75 PAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVG  154 (965)
Q Consensus        75 ~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~  154 (965)
                      |+..|||+|++|++|+|.+.   .++.+.   .+||||++||+ +|. ++-++++..| +|.|++.||+||.+|..+|+.
T Consensus         2 p~rPNIl~I~~Ddl~~~~lg---~yG~~~---~~TPnlD~LA~-~Gv-~Ftn~y~~~p-~C~PSRasllTG~yp~~~G~~   72 (502)
T 4fdi_A            2 PQPPNILLLLMDDMGWGDLG---VYGEPS---RETPNLDRMAA-EGL-LFPNFYSANP-LXSPSRAALLTGRLPIRNGFY   72 (502)
T ss_dssp             -CCCEEEEEEESSCCTTSSG---GGTCTT---CCCHHHHHHHH-TSE-ECSSEECSSS-SHHHHHHHHHHTSCHHHHTCS
T ss_pred             CCCCeEEEEEecCCCCCccc---cCcCCC---CCCHHHHHHHH-hCc-EecCcccCCC-CCcHHHHHHHHCcCccccCcc
Confidence            34579999999999998764   244332   47999999995 553 3456888877 677999999999999999986


Q ss_pred             ccCCC-------C------cCChhhHHHHHHHCCCeEEEEecccccc-----ccCC--CccccCCCCC------------
Q 002110          155 NSFGA-------P------AILEDNLIHQLASNGKRVVMMGDDTWVQ-----LFPH--HFKKSYPYPS------------  202 (965)
Q Consensus       155 ~nf~~-------~------~i~~d~l~~ql~~~G~k~~~~Gd~tW~~-----LfP~--~f~~~~~~~s------------  202 (965)
                      .|...       .      ...+.++.+.|+++||+++++|+  |+-     ..|.  .|+...+.+.            
T Consensus        73 ~~~~~~~~~~~~~~~~~~lp~~~~tl~~~Lk~~GY~T~~~GK--wh~g~~~~~~p~~~Gfd~~~g~~~~~~~~~~~~~~~  150 (502)
T 4fdi_A           73 TTNAHARNAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGK--WHLGHRPQFHPLKHGFDEWFGSPNCHFGPYDNKARP  150 (502)
T ss_dssp             CCSSTTCCCCCCTTBSCCSCTTSCCHHHHHGGGTCEEEEEEC--CCSCCSGGGCGGGTTCSEEEECSSCCCCCCCSSSSC
T ss_pred             ccccccccccCccccccCCCcccchHHHHHHhcceeeEEecc--cccCCCCCCCcccCCCcccccCCCCCCCcccccccc
Confidence            54211       0      12456799999999999999997  431     1111  1111100000            


Q ss_pred             ----ccc------------CCCc----ccchHHHHHHHHHHh---cCCCcEEEEEcCCcCccCc-----cCCCCCHHHHH
Q 002110          203 ----FNV------------KDLH----TVDNGCIEHLLPSLY---EEDWDVLIAHFLGVDHAGH-----ILGVDSVPMIE  254 (965)
Q Consensus       203 ----f~v------------~D~~----~vD~~v~~~l~~~L~---~~~~dllilh~lgvD~~GH-----~~Gp~s~~~~~  254 (965)
                          +..            .+..    ..++..++.+.+.++   +++|.++++.+..+..--.     ........|.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~~h~P~~~~~~~~~~~~~~~Y~~  230 (502)
T 4fdi_A          151 NIPVYRDWEMVGRYYEEFPINLKTGEANLTQIYLQEALDFIKRQARHHPFFLYWAVDATHAPVYASKPFLGTSQRGRYGD  230 (502)
T ss_dssp             CCEEEETTEEEEEBTTTBCCCTTTCBCCHHHHHHHHHHHHHHHHTTTSCEEEEEECCTTSSSCCBCGGGTTCCTTHHHHH
T ss_pred             CccccccccccccccccCCcccccccccchHHHHHHHHHHHHhhcCCCCceEEeeccCccCCccCCchhhhhhhhhhhHH
Confidence                000            0000    012223444555553   5678888888765543211     11234568999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCC------CCCCC-------CCCCCCcEEEEEEEcCCCCCC
Q 002110          255 KLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTI------NGDHG-------GGSAEEVETSVFAMSFKKPPS  321 (965)
Q Consensus       255 ~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~------~G~HG-------g~s~~E~~vpL~~~sp~~~~~  321 (965)
                      +++++|+.||+|+++|++.    |+.|||+||++||||...      .|.||       ...++.+++|+++++|+..+.
T Consensus       231 ~v~~~D~~vG~il~~L~~~----gl~dnTiViftSDhG~~~~~~~~~~g~~g~~~~~K~~~~E~g~rVPlii~~Pg~~~~  306 (502)
T 4fdi_A          231 AVREIDDSIGKILELLQDL----HVADNTFVFFTSDNGAALISAPEQGGSNGPFLCGKQTTFEGGMREPALAWWPGHVTA  306 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHT----TCGGGEEEEEEESSCCCTTSTTTSCCCCTTSSCCTTSSSHHHHBCCEEEECTTTSCT
T ss_pred             HHHHHHHHHHHHHHHHHHc----CCCcCceEEEecCCCccccccccccCccCCCCCCCcccccCcccCcccccCCCccCC
Confidence            9999999999999999987    689999999999999732      23443       122345899999999985432


Q ss_pred             CCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCC--CCCCCcHHhhcC
Q 002110          322 TMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFG--SIGRVSPELYTL  378 (965)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~--~~G~~i~e~l~~  378 (965)
                      ..                 .....++++||+|||++|+|+++|.+  ..|+.+.+++..
T Consensus       307 g~-----------------~~~~~vs~~Di~PTll~laG~~~p~~~~~dG~sl~p~L~~  348 (502)
T 4fdi_A          307 GQ-----------------VSHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQ  348 (502)
T ss_dssp             TE-----------------ECCCCEETTHHHHHHHHHHTCCCCSSSCCCCCCCHHHHHH
T ss_pred             Cc-----------------eeecccccccHHHHHHHHhCCCCCCCCCcCCeehHHHhcC
Confidence            11                 13567999999999999999999874  789999887754


No 8  
>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}
Probab=99.92  E-value=1.8e-25  Score=264.37  Aligned_cols=204  Identities=16%  Similarity=0.273  Sum_probs=141.9

Q ss_pred             CCCeEEE-EEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEec-CCCCCccccccceeecccCcccc
Q 002110           76 AVDRLVI-IVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIAD-PPTTSLQRLKGLTTGGLPTFIDV  153 (965)
Q Consensus        76 ~~~kvVl-IvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~-~PT~T~p~~~sl~TG~~P~~~gv  153 (965)
                      +..|+|+ |++|++|+|.+..   ++..    . +|+|++|++ +|. .+-++++. +|++|.|++.+|+||.+|..||+
T Consensus        38 ~~PniVv~I~~D~l~~d~l~~---~g~~----~-tP~ldrLa~-~G~-~f~~a~~~~~~~~c~Psrasl~TG~~P~~hGi  107 (565)
T 3q3q_A           38 TPPKLIVAISVDQFSADLFSE---YRQY----Y-TGGLKRLTS-EGA-VFPRGYQSHAATETCPGHSTILTGSRPSRTGI  107 (565)
T ss_dssp             SCCSEEEEEEETTCCHHHHHH---HGGG----C-CSHHHHHHH-HSE-EEEEEECCSSCCSHHHHHHHHTTSCCHHHHCC
T ss_pred             CCCCEEEEEEECCCCHHHHHH---hcCC----C-ChHHHHHHH-cCc-EEeCeecCCCCCCchHHHHHHHHCcCHHHcCc
Confidence            3456666 9999999998742   2221    3 899999995 454 33446665 68899999999999999999998


Q ss_pred             ccc--CC----------------------------CC-cCChhhHHHHHHHCCC--eEEEEec-c--------------c
Q 002110          154 GNS--FG----------------------------AP-AILEDNLIHQLASNGK--RVVMMGD-D--------------T  185 (965)
Q Consensus       154 ~~n--f~----------------------------~~-~i~~d~l~~ql~~~G~--k~~~~Gd-~--------------t  185 (965)
                      ..|  +.                            +| .+..+|+-++|+..+.  |+.-++- |              .
T Consensus       108 ~~n~~~d~~~~~~~~~v~~~~D~~~~~~g~~~~~~sp~~l~~~Ti~d~Lka~~~~skv~~va~kdr~ail~aGh~a~~a~  187 (565)
T 3q3q_A          108 IANNWFDLDAKREDKNLYCAEDESQPGSSSDKYEASPLHLKVPTLGGRMKAANPATRVVSVAGKDRAAIMMGGATADQVW  187 (565)
T ss_dssp             CSSEEECTTCSSSCCEEETTBCTTSTTCBTTBCCBCSTTCCSCCHHHHHHHHCTTCCEEEEESSHHHHHHHHCTTCSEEE
T ss_pred             ccccccccchhhcCceEEeeccccccccCCcccCCChhhhcCCcHHHHHHhcCCCcEEEEEecCcccccccCCcccCeee
Confidence            644  22                            22 3456889999986554  3332321 1              1


Q ss_pred             ccc-------cc----CC---Cccc-----------cCCCCCcc----------------------------cCCCcccc
Q 002110          186 WVQ-------LF----PH---HFKK-----------SYPYPSFN----------------------------VKDLHTVD  212 (965)
Q Consensus       186 W~~-------Lf----P~---~f~~-----------~~~~~sf~----------------------------v~D~~~vD  212 (965)
                      |..       .|    |.   .|+.           ..+.++|.                            .......|
T Consensus       188 W~d~~~gfstyy~~~~p~w~~~~n~~~~~~~~~w~~~~~~~~y~~~~~~~~~~g~~~~~~~~f~~~~~~~~~~~~sp~~D  267 (565)
T 3q3q_A          188 WLGGPQGYVSYKGVAPTPLVTQVNQAFAQRLAQPNPGFELPAQCVSKDFPVQAGNRTVGTGRFARDAGDYKGFRISPEQD  267 (565)
T ss_dssp             EECSTTCEECSTTCCCCHHHHHHHHHHHHHHTSCBCCCCCCGGGGGGCCCEEETTEEESCCCCCBCTTCHHHHHSSHHHH
T ss_pred             EecCCCCccccccccCcHHHHHHhhccccccccccccccccccccccccccccccccccCcccccccccccccccChHHH
Confidence            221       01    10   0000           00000010                            00001246


Q ss_pred             hHHHHHHHHHHhc------CCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEE
Q 002110          213 NGCIEHLLPSLYE------EDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLL  286 (965)
Q Consensus       213 ~~v~~~l~~~L~~------~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllI  286 (965)
                      +.+++.+.+.|++      ++||++++|+.++|++||.+||+++++.++++++|+.|+++++.++++.      ++|+||
T Consensus       268 ~~v~~~A~~~l~~~~l~~~~~pdll~vy~~~~D~~gH~~Gp~S~e~~~~l~~lD~~lg~Ll~~l~~~~------~~t~vi  341 (565)
T 3q3q_A          268 AMTLAFAAAAIENMQLGKQAQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLDKDG------IDYVVV  341 (565)
T ss_dssp             HHHHHHHHHHHHHTTTTSSSSCEEEEEEECHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHTT------CCEEEE
T ss_pred             HHHHHHHHHHHHhcccCCCCCCCEEEEEcCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEE
Confidence            7777777777753      4699999999999999999999999999999999999999999999763      799999


Q ss_pred             EEcCCCCCC
Q 002110          287 VMGDHGQTI  295 (965)
Q Consensus       287 VtsDHGm~~  295 (965)
                      |+|||||.+
T Consensus       342 vtSDHG~~~  350 (565)
T 3q3q_A          342 LTADHGGHD  350 (565)
T ss_dssp             EECSCCCCC
T ss_pred             EEcCCCCCC
Confidence            999999975


No 9  
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=99.92  E-value=1.1e-24  Score=257.21  Aligned_cols=270  Identities=18%  Similarity=0.141  Sum_probs=192.3

Q ss_pred             CCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccccc
Q 002110           76 AVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGN  155 (965)
Q Consensus        76 ~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~  155 (965)
                      +..|||+|++|++|+|.+..   ++..   ...+|+|++|++ +|. .+-++++..| .|.|++.+|+||.+|..+|+..
T Consensus        26 ~~PNIv~I~~Ddl~~~~l~~---~G~~---~~~TPnld~La~-~G~-~f~~~y~~~~-~c~PSrasllTG~~p~~~g~~~   96 (491)
T 2qzu_A           26 PTPNLVFIMADQYRGDAIGC---IGKE---PVKTPHLDKLAS-EGI-NFTNAISSYP-VSSPARGMLMTGMYPIGSKVTG   96 (491)
T ss_dssp             SSCEEEEEEETTCCTTCCGG---GCSS---CCCCHHHHHHHH-TSE-EETTCBCSSC-SHHHHHHHHHHCSCHHHHCCCS
T ss_pred             CCCCEEEEEeCCCCccchhh---ccCC---CCCCcHHHHHHh-cCc-EEeceecCCC-cccHHHHHHHhCCCcccCCccc
Confidence            45799999999999987642   3322   157999999995 553 3345777777 6889999999999999999866


Q ss_pred             cCCC------C--cCChhhHHHHHHHCCCeEEEEecccccc---------------------ccC----CCccccCCCC-
Q 002110          156 SFGA------P--AILEDNLIHQLASNGKRVVMMGDDTWVQ---------------------LFP----HHFKKSYPYP-  201 (965)
Q Consensus       156 nf~~------~--~i~~d~l~~ql~~~G~k~~~~Gd~tW~~---------------------LfP----~~f~~~~~~~-  201 (965)
                      |...      .  ...+.++.+.|+++||+++++|+  |.-                     ..|    ..|+...++. 
T Consensus        97 ~~~~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~Gk--wh~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~Gfd~~~~~~~  174 (491)
T 2qzu_A           97 NCNSETAPYGVELSQNARCWSDVLKDQGYNMGYIGK--WHLDAPYKPYVDTYNNRGKVAWNEWCPPERRHGFDHWIAYGT  174 (491)
T ss_dssp             CCSTTTGGGTCSCCTTCCCHHHHHHHTTCEEEEEEE--CCCSCCCSSCCSSGGGSSSCCCCCCCCGGGSTTCCEEEEESC
T ss_pred             cccccCcccCCCCCcccchHHHHHHHCCCeEEEEcc--ccCCCccccccccccccccccccccCCccccCCCceeeccCC
Confidence            5321      1  12457899999999999999986  431                     112    1122110000 


Q ss_pred             -------CcccCC---------CcccchHHHHHHHHHHh----cCCCcEEEEEcCCcCccC--------ccCCCCC----
Q 002110          202 -------SFNVKD---------LHTVDNGCIEHLLPSLY----EEDWDVLIAHFLGVDHAG--------HILGVDS----  249 (965)
Q Consensus       202 -------sf~v~D---------~~~vD~~v~~~l~~~L~----~~~~dllilh~lgvD~~G--------H~~Gp~s----  249 (965)
                             .+...+         -...|+.+++++.++|+    +++|.++++++.+++..-        +.|.+..    
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~PfFl~~~~~~pH~P~~~~p~~~~~~y~~~~~~~~  254 (491)
T 2qzu_A          175 YDYHLKPMYWNTTAPRDSFYYVNQWGPEYEASKAIEYINGQKDQKQPFALVVSMNPPHTGYELVPDRYKEIYKDLDVEAL  254 (491)
T ss_dssp             CCCTTSCEEBCTTCCTTCCEECSSCHHHHHHHHHHHHHHTTTTCSSCEEEEEEECTTSSCTTCSCHHHHHTTTTCCHHHH
T ss_pred             CcccCCCccccCCCcccccccccCcccHHHHHHHHHHHHhcccCCCCeEEEeCCCCCCCccccCCHHHHhhhccCCcccc
Confidence                   000000         01124566777888885    357999999998765432        1232211    


Q ss_pred             ----------------------HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCCCCCC-----CC
Q 002110          250 ----------------------VPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTINGDHG-----GG  302 (965)
Q Consensus       250 ----------------------~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~G~HG-----g~  302 (965)
                                            ..|.++++++|+.||+|+++|++.    |+.|||+||++||||.. .|.||     ..
T Consensus       255 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~L~~~----g~~dnTiIiftSDHG~~-~g~~g~~~K~~~  329 (491)
T 2qzu_A          255 CKGRPDIPAKGTEMGDYFRNNIRNYYACITGVDENVGRIIEALKQN----NLFDNTIVVFTSDHGIC-MGAHENAGKDIF  329 (491)
T ss_dssp             TTTCTTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCSTTEEEEEECSCCCC-TTGGGCSSCCSS
T ss_pred             cccCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCcCCeEEEEECcCCcc-cccccCCCCCCc
Confidence                                  468889999999999999999986    58899999999999984 45554     22


Q ss_pred             CCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCcccc-ccHHHHHHHhhCCC--CCCCCCCCCcHHhhcCC
Q 002110          303 SAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQ-LDFAATVSALLGVP--FPFGSIGRVSPELYTLG  379 (965)
Q Consensus       303 s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~q-iDiaPTLa~LlGip--iP~~~~G~~i~e~l~~~  379 (965)
                      .++.+++||++++|+..++.                  .....+++ +||+|||+.++|++  +|....|+++.+++...
T Consensus       330 ~e~~~rVPlii~~Pg~~~g~------------------~~~~~vs~~~Di~PTll~laG~~~~~p~~~dG~sl~~~l~~~  391 (491)
T 2qzu_A          330 YEESMRIPMILSWPDQIKPR------------------KSDPLMIAFADLYPTLLSMMGFSKEIPETVQTFDLSNEVLTG  391 (491)
T ss_dssp             SHHHHBCCEEEECTTTCCCE------------------EEECCCCBGGGHHHHHHHHTTCGGGSCTTCCSCCCHHHHHHC
T ss_pred             cccccccCeEEECCCCCCCc------------------eechhhhhchhHHHHHHHHcCCCCCCCCCCCCccHHHHHCCC
Confidence            34458999999999865321                  12456899 99999999999999  99999999999988643


No 10 
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2
Probab=99.92  E-value=2.9e-24  Score=257.70  Aligned_cols=271  Identities=17%  Similarity=0.205  Sum_probs=188.0

Q ss_pred             CCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccccc
Q 002110           77 VDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGNS  156 (965)
Q Consensus        77 ~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~n  156 (965)
                      ..|||+|++|++|+|.+.   .++...   ..+|||++|++ +|. ++-++++..| +|.|++.+|+||.+|..+|+..|
T Consensus         5 kPNIl~I~~Ddl~~~~lg---~yG~~~---~~TPnlD~LA~-~G~-~F~n~y~~~p-~C~PSRasllTG~yp~~~G~~~~   75 (562)
T 1p49_A            5 RPNIILVMADDLGIGDPG---CYGNKT---IRTPNIDRLAS-GGV-KLTQHLAASP-LXTPSRAAFMTGRYPVRSGMASW   75 (562)
T ss_dssp             CCEEEEEEESSCCTTSSG---GGTCSS---SCCHHHHTTTT-TSE-EESSEECSCC-C-CHHHHHHHHSSCGGGGTCSCS
T ss_pred             CCcEEEEEeCCCCCchhh---hcCCCC---CCCChHHHHHh-CCc-EEecccccCC-cCCcccceeecCCCccccCCccc
Confidence            469999999999998664   234321   47999999995 553 3445788777 68899999999999999998654


Q ss_pred             CCC-----------CcCChhhHHHHHHHCCCeEEEEeccccccc-----------cCC--CccccCCCCC----------
Q 002110          157 FGA-----------PAILEDNLIHQLASNGKRVVMMGDDTWVQL-----------FPH--HFKKSYPYPS----------  202 (965)
Q Consensus       157 f~~-----------~~i~~d~l~~ql~~~G~k~~~~Gd~tW~~L-----------fP~--~f~~~~~~~s----------  202 (965)
                      ...           -...+.++.+.|+++||+++++|+  |+--           .|.  .|+..++++.          
T Consensus        76 ~~~~~~~~~~~~~~l~~~~~tl~~~Lk~aGY~T~~~GK--wHlg~~~~~~~~~~~~p~~~GFd~~~g~~~~~~~~~~~~~  153 (562)
T 1p49_A           76 SRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGK--WHLGMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGE  153 (562)
T ss_dssp             SSCCSCCCTTCCCCSCTTCCCHHHHHHHTTCEEEEEEE--CCSCCCSSSTTTCTTSGGGTTCSEEEEESSCCCGGGSTTC
T ss_pred             cccccccccccccCCCcccchHHHHHHHcCCceeeecc--cccCCcccccCcccCCCCcCCCceeeccccccccccccCc
Confidence            211           123467899999999999999997  5310           111  1221111000          


Q ss_pred             ---cc-----------------------------------------------------------------cC--------
Q 002110          203 ---FN-----------------------------------------------------------------VK--------  206 (965)
Q Consensus       203 ---f~-----------------------------------------------------------------v~--------  206 (965)
                         +.                                                                 ..        
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (562)
T 1p49_A          154 GSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQP  233 (562)
T ss_dssp             CTTSHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEETTEEEEES
T ss_pred             CCccCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCccccCc
Confidence               00                                                                 00        


Q ss_pred             -CCcccchHHHHHHHHHHhc--CCCcEEEEEcCCcCccCc---cC-C-CCCHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 002110          207 -DLHTVDNGCIEHLLPSLYE--EDWDVLIAHFLGVDHAGH---IL-G-VDSVPMIEKLEQYNEILDKVIEVLDNQSGPGG  278 (965)
Q Consensus       207 -D~~~vD~~v~~~l~~~L~~--~~~dllilh~lgvD~~GH---~~-G-p~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g  278 (965)
                       +....++.+++++.++|++  ++|.++++++..++..-+   .+ + .....|.++++++|+.||+|+++|++.    |
T Consensus       234 ~~~~~~~~~~~~~a~~~i~~~~~~Pffl~~~~~~~H~P~~~~~~~~~~~~~~~y~~~v~~~D~~vG~il~~L~~~----g  309 (562)
T 1p49_A          234 MSYDNLTQRLTVEAAQFIQRNTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDEL----R  309 (562)
T ss_dssp             CCCTTHHHHHHHHHHHHHHTTTTSCEEEEEECCTTSSSCCCCTTTSSCCSSSHHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred             cccccchHHHHHHHHHHHHhcCCCCeEEEecCCCCcCCCCCChhHhCcchHHHHHHHHHHHHHHHHHHHHHHHHc----C
Confidence             0011234456677777753  679999999987654321   11 1 123568899999999999999999986    6


Q ss_pred             CCCCEEEEEEcCCCCCCCCC------CCC-----------CCCCCcEEEEEEEcCCCCCCCCCCCCCCCccccccccccc
Q 002110          279 LHENTFLLVMGDHGQTINGD------HGG-----------GSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKT  341 (965)
Q Consensus       279 ~~~dTllIVtsDHGm~~~G~------HGg-----------~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~  341 (965)
                      +.|||+||++||||......      |||           ..++.+++||++++|+..+...                 .
T Consensus       310 ~~dnTiviftsDhG~~~~~~~~~~~~~g~~~~~~~g~K~~~~e~~~rvP~ii~~P~~~~~g~-----------------~  372 (562)
T 1p49_A          310 LANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQ-----------------K  372 (562)
T ss_dssp             CGGGEEEEEEESSCCCTTCBCSSSCBCSCCCTTCCCCTTSSSHHHHCCCEEEECTTTSCTTC-----------------E
T ss_pred             CccCeEEEEECCCCcccccccccccccCccCCCccCCccCccCCceEEeEEEecCCcCCCCc-----------------e
Confidence            88999999999999853110      222           2234589999999998432110                 1


Q ss_pred             ccCccccccHHHHHHHhhCCCCCC--CCCCCCcHHhhcCC
Q 002110          342 CISSFQQLDFAATVSALLGVPFPF--GSIGRVSPELYTLG  379 (965)
Q Consensus       342 ~~~~v~qiDiaPTLa~LlGipiP~--~~~G~~i~e~l~~~  379 (965)
                      ....++++||+|||+.++|+++|.  ...|+++.+++...
T Consensus       373 ~~~~~~~~Di~PTll~l~G~~~p~~~~~dG~sl~~~L~g~  412 (562)
T 1p49_A          373 IDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGK  412 (562)
T ss_dssp             ECSCEEGGGHHHHHHHHHTCCCCSSSCCCCCCCHHHHTTS
T ss_pred             ECCceeeeHHHHHHHHHhCCCCCCCCCcCCeEHHHHhcCC
Confidence            245689999999999999999998  58999999999654


No 11 
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=99.91  E-value=1.1e-24  Score=260.23  Aligned_cols=273  Identities=16%  Similarity=0.132  Sum_probs=190.1

Q ss_pred             CCCeEEEEEEcCCCccccCCcCCCCC--CcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccc
Q 002110           76 AVDRLVIIVLDALRFDFVAPSTFFKE--PKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDV  153 (965)
Q Consensus        76 ~~~kvVlIvIDgLR~D~l~~~~~~~~--~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv  153 (965)
                      +..|||+|++|++|+|.+..   ++.  .......+|+|++|++ +|. .+-++++..| +|.|++.+|+||.+|..+|+
T Consensus        31 ~~PNIl~I~~Ddl~~~~l~~---~G~~~~~~~~~~TPnlD~LA~-~G~-~F~~~y~~~~-~c~PSRasllTG~~p~~~g~  104 (543)
T 2vqr_A           31 RKKNVLLIVVDQWRADFVPH---VLRADGKIDFLKTPNLDRLCR-EGV-TFRNHVTTCV-PXGPARASLLTGLYLMNHRA  104 (543)
T ss_dssp             -CCEEEEEEESSCCTTSCHH---HHHHTTCCCCSCCHHHHHHHH-HSE-EEEEEECSSC-SHHHHHHHHHHCCCHHHHCC
T ss_pred             CCCCEEEEEeCCCCccchhh---ccCcccccccCcCchHHHHHh-cCe-eecceEecCC-CCCccccceecccCccccCC
Confidence            45799999999999987631   221  0000157999999995 453 4456787766 68899999999999999998


Q ss_pred             cccCCCCcCChhhHHHHHHHCCCeEEEEecccccccc-C-----------C------CccccC----------------C
Q 002110          154 GNSFGAPAILEDNLIHQLASNGKRVVMMGDDTWVQLF-P-----------H------HFKKSY----------------P  199 (965)
Q Consensus       154 ~~nf~~~~i~~d~l~~ql~~~G~k~~~~Gd~tW~~Lf-P-----------~------~f~~~~----------------~  199 (965)
                      ..|...-...+.++.+.|+++||+++++|+  |+--. +           .      .|+...                +
T Consensus       105 ~~~~~~l~~~~~tl~~~Lk~aGY~T~~~GK--wh~~~~~~~~~~~~~~~~~~~~~~~GFd~~~~~~~~~~~y~~~~~~~g  182 (543)
T 2vqr_A          105 VQNTVPLDQRHLNLGKALRGVGYDPALIGY--TTTVPDPRTTSPNDPRFRVLGDLMDGFHPVGAFEPNMEGYFGWVAQNG  182 (543)
T ss_dssp             CSTTSBCCTTSCCHHHHHHTTTCCEEEEEC--CCBBCCTTSSCTTCGGGSSSCBCCTTCEEEEECCGGGHHHHHHHHHTT
T ss_pred             ccCCCcCCcccCcHHHHHHHCCCEEEEEcc--ccccCcccccccccccccccccCCCCccccccccccccchHHHHHhcC
Confidence            765322123567899999999999999997  43111 0           0      121100                0


Q ss_pred             C----CCcc-------------------cCCCcccchHHHHHHHHHHhc--CCCcEEEEEcCCcCccC-------ccCCC
Q 002110          200 Y----PSFN-------------------VKDLHTVDNGCIEHLLPSLYE--EDWDVLIAHFLGVDHAG-------HILGV  247 (965)
Q Consensus       200 ~----~sf~-------------------v~D~~~vD~~v~~~l~~~L~~--~~~dllilh~lgvD~~G-------H~~Gp  247 (965)
                      +    ..+.                   +.+-...|+.+++++.++|++  ++|.++++++..++..-       +.|.+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~l~~~~~kPFFl~~~~~~pH~P~~~p~~~~~~y~~  262 (543)
T 2vqr_A          183 FDLPEHRPDIWLPEGEDAVAGATDRPSRIPKEFSDSTFFTERALTYLKGRDGKPFFLHLGYYRPHPPFVASAPYHAMYRP  262 (543)
T ss_dssp             CCCCSSGGGGGSBSSTTCCSSSCSSCBSSCGGGSHHHHHHHHHHHHHHHHTTSCCEEEEECCTTSSSCCCCTTGGGSSCG
T ss_pred             ccccccchhhhcccccccccccccCcccccccccchHHHHHHHHHHHHhCCCCCeEEEeCCCCCcCCCCCChHHHhhcCc
Confidence            0    0000                   000011244567777777753  68999999998765421       11211


Q ss_pred             C----------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHhccCC
Q 002110          248 D----------------------------------------------------SVPMIEKLEQYNEILDKVIEVLDNQSG  275 (965)
Q Consensus       248 ~----------------------------------------------------s~~~~~~l~~~D~~I~~I~~~L~~~~~  275 (965)
                      .                                                    ...|.++++++|+.||+|++.|++.  
T Consensus       263 ~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~--  340 (543)
T 2vqr_A          263 EDMPAPIRAANPDIEAAQHPLMKFYVDSIRRGSFFQGAEGSGATLDEAELRQMRATYCGLITEVDDCLGRVFSYLDET--  340 (543)
T ss_dssp             GGSCCCCCCSSHHHHHTTCHHHHHHHHHCBGGGTSTTCCSBGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             ccCCCCccccccccccccChhhhhhhhccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            0                                                    1247789999999999999999986  


Q ss_pred             CCCCCCCEEEEEEcCCCCCCCCCCC-----CCCCCCcEEEEEEEcCCCCC--CCCCCCCCCCcccccccccccccCcccc
Q 002110          276 PGGLHENTFLLVMGDHGQTINGDHG-----GGSAEEVETSVFAMSFKKPP--STMPSEFDTSSCEMDLDQKKTCISSFQQ  348 (965)
Q Consensus       276 ~~g~~~dTllIVtsDHGm~~~G~HG-----g~s~~E~~vpL~~~sp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~q  348 (965)
                        |+.|||+||++||||.. .|+||     ...++.+++||++++|+..+  +.                  .....+++
T Consensus       341 --gl~dnTiIiftSDHG~~-~g~~~~~~K~~~~e~~~rVPlii~~P~~~~~~g~------------------~~~~~vs~  399 (543)
T 2vqr_A          341 --GQWDDTLIIFTSDHGEQ-LGDHHLLGKIGYNDPSFRIPLVIKDAGENARAGA------------------IESGFTES  399 (543)
T ss_dssp             --TCGGGEEEEEEESCCCC-TTGGGCCSSCSSCHHHHBCCEEEECSSSCTTTTC------------------EEEEEEEG
T ss_pred             --CCcCCeEEEEECcCCcc-ccccccccCcCcccccceeeEEEEeCCccccCCc------------------cccCccch
Confidence              68899999999999984 34443     33344589999999998653  21                  12456999


Q ss_pred             ccHHHHHHHhhCCCCCCCCCCCCcHHhhcCC
Q 002110          349 LDFAATVSALLGVPFPFGSIGRVSPELYTLG  379 (965)
Q Consensus       349 iDiaPTLa~LlGipiP~~~~G~~i~e~l~~~  379 (965)
                      +||+|||+.++|+++|....|+++.+++...
T Consensus       400 ~Di~PTll~laG~~~p~~~dG~sl~p~l~g~  430 (543)
T 2vqr_A          400 IDVMPTILDWLGGKIPHACDGLSLLPFLSEG  430 (543)
T ss_dssp             GGHHHHHHHHTTCCCCTTCSCCCCHHHHTTC
T ss_pred             hhHHHHHHHHhCCCCCCCCCCEeHHHHhcCC
Confidence            9999999999999999999999999999754


No 12 
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=99.91  E-value=1.4e-23  Score=247.72  Aligned_cols=269  Identities=17%  Similarity=0.109  Sum_probs=185.8

Q ss_pred             CCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccccc
Q 002110           77 VDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGNS  156 (965)
Q Consensus        77 ~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~n  156 (965)
                      ..|||+|++|++|+|.+..   ++.    ...+|+|++|++ +|. .+-++++ .| +|.|++.+|+||.+|..+|+..+
T Consensus         3 ~PNIv~I~~Ddl~~~~l~~---~g~----~~~TPnld~La~-~G~-~F~~~y~-~~-~c~PsRasllTG~~p~~~g~~~~   71 (492)
T 1fsu_A            3 PPHLVFLLADDLGWNDVGF---HGS----RIRTPHLDALAA-GGV-LLDNYYT-QP-LXTPSRSQLLTGRYQIRTGLQHQ   71 (492)
T ss_dssp             CCEEEEEEESSCCTTSSGG---GTC----SSCCHHHHHHHH-TSE-EETTEEC-CC-C-CHHHHHHHHCSCHHHHTCCSS
T ss_pred             CCcEEEEEeCCCCCcccCC---CCC----CCCCCcHHHHHh-cCc-Eecccee-CC-CCCHHHHHHHHcCChhhhCCCCc
Confidence            4699999999999987642   331    157999999995 553 3345776 44 67899999999999999987654


Q ss_pred             CCC----C--cCChhhHHHHHHHCCCeEEEEecccccc------ccCC--CccccCCC----CCc-cc------------
Q 002110          157 FGA----P--AILEDNLIHQLASNGKRVVMMGDDTWVQ------LFPH--HFKKSYPY----PSF-NV------------  205 (965)
Q Consensus       157 f~~----~--~i~~d~l~~ql~~~G~k~~~~Gd~tW~~------LfP~--~f~~~~~~----~sf-~v------------  205 (965)
                      ...    .  ...+.++.+.|+++||+++++|+  |+.      ..|.  .|+...++    ..+ ..            
T Consensus        72 ~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~gk--wh~g~~~~~~~p~~~Gfd~~~g~~~~~~~~~~~~~~~~~~~~~~~  149 (492)
T 1fsu_A           72 IIWPCQPSCVPLDEKLLPQLLKEAGYTTHMVGK--WHLGMYRKECLPTRRGFDTYFGYLLGSEDYYSHERCTLIDALNVT  149 (492)
T ss_dssp             CCCTTCCCCSCTTCCCHHHHHHHTTCEEEEEEC--CCSCCSSGGGSGGGTTCSEEEECSSSCCCTTTCEEEEEEGGGTEE
T ss_pred             ccCCCCcCCCCcccchHHHHHHHCCCcEEEecc--cccCCCCCCCCCccCCCCccccccCCCccccCCcccccccccccc
Confidence            211    1  12457899999999999999997  431      1121  12221110    000 00            


Q ss_pred             ---CCC------------cccchHHHHHHHHHHh---cCCCcEEEEEcCCcCccC-------ccCCC----CCHHHHHHH
Q 002110          206 ---KDL------------HTVDNGCIEHLLPSLY---EEDWDVLIAHFLGVDHAG-------HILGV----DSVPMIEKL  256 (965)
Q Consensus       206 ---~D~------------~~vD~~v~~~l~~~L~---~~~~dllilh~lgvD~~G-------H~~Gp----~s~~~~~~l  256 (965)
                         .|+            ...++.+++++.++|+   +++|.++++++..++..-       +.|+.    ....|.+++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~Pffl~~~~~~pH~P~~~p~~~~~~~~~~~~~~~~~Y~~~v  229 (492)
T 1fsu_A          150 RCALDFRDGEEVATGYKNMYSTNIFTKRAIALITNHPPEKPLFLYLALQSVHEPLQVPEEYLKPYDFIQDKNRHHYAGMV  229 (492)
T ss_dssp             EEEECCEETTEECCSCTTCCHHHHHHHHHHHHHHTCCTTSCEEEEEECCTTSSSCCCCGGGTGGGTTCCSHHHHHHHHHH
T ss_pred             ccccccccCCccccCCCCCcchHHHHHHHHHHHHhcCCCCCEEEEeCCCCCcCCCcCCHHHHHhhcCcccchHHHHHHHH
Confidence               010            0113445677778885   357999999998765421       22221    135688999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCC---------CCCCCCCCCCcEEEEEEEcCCCCCCCCCCCC
Q 002110          257 EQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTIN---------GDHGGGSAEEVETSVFAMSFKKPPSTMPSEF  327 (965)
Q Consensus       257 ~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~---------G~HGg~s~~E~~vpL~~~sp~~~~~~~~~~~  327 (965)
                      +++|+.||+|+++|++.    |+.|||+||++||||....         |.++...++.+++||++++|+..+..     
T Consensus       230 ~~~D~~vG~ll~~L~~~----g~~dnTiviftSDhG~~~~~~~~~~~l~g~K~~~~e~~~rVPlii~~P~~~~~g-----  300 (492)
T 1fsu_A          230 SLMDEAVGNVTAALKSS----GLWNNTVFIFSTDNGGQTLAGGNNWPLRGRKWSLWEGGVRGVGFVASPLLKQKG-----  300 (492)
T ss_dssp             HHHHHHHHHHHHHHHHT----TCGGGEEEEEEESSCCCGGGTCCCTTSSCCTTSSSHHHHBCCEEEECTTCSSCS-----
T ss_pred             HHHHHHHHHHHHHHHHc----CCccCEEEEEECCCCCCccCCCCCCCcCCCCCCccCCCeeeEEEEECCCcCCCC-----
Confidence            99999999999999986    5889999999999998521         11122234458999999999864321     


Q ss_pred             CCCcccccccccccccCccccccHHHHHHHhhCCCCC--CCCCCCCcHHhhcCC
Q 002110          328 DTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFP--FGSIGRVSPELYTLG  379 (965)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP--~~~~G~~i~e~l~~~  379 (965)
                                  ......++++||+|||+.++|+++|  ....|+++.+++...
T Consensus       301 ------------~~~~~~vs~~Di~PTll~laG~~~p~~~~~dG~sl~~~l~~~  342 (492)
T 1fsu_A          301 ------------VKNRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWKTISEG  342 (492)
T ss_dssp             ------------EEECSCEEGGGHHHHHHHHTTCCCTTSCCCCCCCCHHHHHHC
T ss_pred             ------------ceecCceeeeHHHHHHHHHhCCCCCCCCCcCCccHHHHHcCC
Confidence                        0124579999999999999999999  678999999988643


No 13 
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=99.90  E-value=1.8e-23  Score=249.44  Aligned_cols=269  Identities=20%  Similarity=0.200  Sum_probs=186.4

Q ss_pred             CCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccccc
Q 002110           77 VDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGNS  156 (965)
Q Consensus        77 ~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~n  156 (965)
                      ..|||+|++|++|+|.+.   .++..    ..+|+|++|++ +|. .+-++++ .| +|.|++.+|+||.+|..+|+..+
T Consensus         4 ~PNIl~I~~Ddl~~~~l~---~~G~~----~~TPnlD~LA~-~G~-~F~~~y~-~~-~c~PSRasllTG~~p~~~g~~~~   72 (536)
T 1hdh_A            4 RPNFLVIVADDLGFSDIG---AFGGE----IATPNLDALAI-AGL-RLTDFHT-AS-TXSPTRSMLLTGTDHHIAGIGTM   72 (536)
T ss_dssp             CCEEEEEEESSCCTTCSG---GGTCC----SCCHHHHHHHH-HSE-EESSEEC-CS-SHHHHHHHHTTSSCHHHHTCSSC
T ss_pred             CCeEEEEEECCCCcchhh---ccCCC----CCCchHHHHHh-cCc-eecceec-cc-ccCcchhhhhccccccccccccc
Confidence            469999999999998764   23331    47999999995 453 3445776 45 68899999999999999998654


Q ss_pred             C--------CCC------cCChhhHHHHHHHCCCeEEEEecccccc-----ccCC--CccccCCC-----CCcc------
Q 002110          157 F--------GAP------AILEDNLIHQLASNGKRVVMMGDDTWVQ-----LFPH--HFKKSYPY-----PSFN------  204 (965)
Q Consensus       157 f--------~~~------~i~~d~l~~ql~~~G~k~~~~Gd~tW~~-----LfP~--~f~~~~~~-----~sf~------  204 (965)
                      .        +.+      ...+.++.+.|+++||+++++|+  |+-     ..|.  .|+...++     ..|.      
T Consensus        73 ~~~~~~~~~~~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~GK--wh~g~~~~~~p~~~GFd~~~~~~~~~~~~~~~~~~~~  150 (536)
T 1hdh_A           73 AEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGK--WHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYD  150 (536)
T ss_dssp             GGGCCTTTTTCTTCSSSCCSSSCCHHHHHHTTTCEEEEEEE--CCSCSSGGGSTTTTTCSEEEEECSSCCCTTCCCCCCS
T ss_pred             cccccccccCCCcccccCCcccccHHHHHHHCCCeEEEecc--ccCCCCCCCCCcCCCCCeeecccCCCcccCCCCcccc
Confidence            1        111      12456899999999999999997  541     1121  12221100     0010      


Q ss_pred             --------------cCCC---------cccchHHHHHHHHHHhc---CCCcEEEEEcCCcCccCc-------cCC-----
Q 002110          205 --------------VKDL---------HTVDNGCIEHLLPSLYE---EDWDVLIAHFLGVDHAGH-------ILG-----  246 (965)
Q Consensus       205 --------------v~D~---------~~vD~~v~~~l~~~L~~---~~~dllilh~lgvD~~GH-------~~G-----  246 (965)
                                    ..+-         ...|+.+++++.++|++   ++|.++++++..++..-+       +|.     
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~i~~~~~~kPFFl~~~~~~pH~P~~~p~~~~~~y~~~~~~  230 (536)
T 1hdh_A          151 ESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDA  230 (536)
T ss_dssp             TTSCHHHHTCCCCEEETTEECSCCCTTCCHHHHHHHHHHHHHHTSCTTSCEEEEEECCTTSSSCCCCHHHHGGGTTTTTT
T ss_pred             ccccccccCCCcccccCCEecccCCCCcccHHHHHHHHHHHHHhcCCCCCeEEEecCCCCcCCCcCCHHHHHHhcccccc
Confidence                          0000         01245667788888853   579999999987654211       010     


Q ss_pred             -------------------C-----------------CC-----------HHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 002110          247 -------------------V-----------------DS-----------VPMIEKLEQYNEILDKVIEVLDNQSGPGGL  279 (965)
Q Consensus       247 -------------------p-----------------~s-----------~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~  279 (965)
                                         |                 .+           ..|.++++++|+.||+|+++|++.    |+
T Consensus       231 ~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~L~~~----g~  306 (536)
T 1hdh_A          231 GPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQ----GE  306 (536)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCTTCCCCCCCCSSCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TC
T ss_pred             chhhhhhHHHhhhhhcCccCcccccCccccccccccccCHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CC
Confidence                               0                 01           247889999999999999999986    68


Q ss_pred             CCCEEEEEEcCCCCCCC-----CCCCC--------------------------------------------CCCCCcEEE
Q 002110          280 HENTFLLVMGDHGQTIN-----GDHGG--------------------------------------------GSAEEVETS  310 (965)
Q Consensus       280 ~~dTllIVtsDHGm~~~-----G~HGg--------------------------------------------~s~~E~~vp  310 (965)
                      .|||+||++||||....     |.||.                                            ..++.+++|
T Consensus       307 ~dnTiIiftSDhG~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~w~~~~~~p~~~~K~~~~E~g~rVP  386 (536)
T 1hdh_A          307 LDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVP  386 (536)
T ss_dssp             GGGEEEEEEESSSCCCCCGGGCGGGCSSHHHHHHHHCCCSGGGTTSTTCCCCCHHHHHHHHHTTSSSCTTSSSHHHHBCC
T ss_pred             cCCeEEEEECcCCCcccccccccccccccccccccccccccccccccccccccccccccccCCccccccCcccCCCceee
Confidence            99999999999998521     22321                                            123358999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCCC---------CCCCcHHhhcCC
Q 002110          311 VFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFGS---------IGRVSPELYTLG  379 (965)
Q Consensus       311 L~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~~---------~G~~i~e~l~~~  379 (965)
                      |++++|+..+...                 .....++++||+|||+.++|+++|...         .|+++.+++...
T Consensus       387 lii~~Pg~~~~g~-----------------~~~~~vs~~Di~PTll~laG~~~p~~~~~g~~~~~~dG~Sl~p~l~~~  447 (536)
T 1hdh_A          387 ALVRYPRLSRQGA-----------------ISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGE  447 (536)
T ss_dssp             EEEECTTSSCCSS-----------------EECCCEEGGGHHHHHHHHHTCCCCCSEETTEECCCCSSCCSHHHHTTS
T ss_pred             EEEEcCCcCCCCC-----------------eECCceeehHHHHHHHHHhCCCCCccccccCccCCCCCcchHHHhcCC
Confidence            9999998643210                 124579999999999999999999875         999999998653


No 14 
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*
Probab=99.90  E-value=3.4e-24  Score=265.43  Aligned_cols=185  Identities=21%  Similarity=0.194  Sum_probs=143.5

Q ss_pred             CCCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccc
Q 002110           74 RPAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDV  153 (965)
Q Consensus        74 ~~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv  153 (965)
                      ..+.+|||+|++||+|+|++..         +...+|+|++|++ .|. ...++++.+|++|.|++.+|+||.+|..||+
T Consensus       124 ~~~~pnVllI~iDglr~d~l~~---------~~~~tPnLd~La~-~Gv-~~~~~~~~~Ps~T~PsraSLlTG~yP~~HGI  192 (831)
T 3nkq_A          124 GFVRPPLIIFSVDGFRASYMKK---------GSKVMPNIEKLRS-CGT-HAPYMRPVYPTKTFPNLYTLATGLYPESHGI  192 (831)
T ss_dssp             TCCSCCEEEEEEETCCGGGGGG---------GGGTCHHHHHHHH-HSE-ECSCEECCSSCSHHHHHHHHHHSCCHHHHSC
T ss_pred             ccCCCcEEEEEECCCChHhhhh---------hccCChHHHHHHH-CCc-cccccEecCCCCcHHHHHHHhcCcCcccccc
Confidence            4467899999999999999752         1246999999996 443 2235789999999999999999999999998


Q ss_pred             cccCC-CC-----------c------CChhhHHHHHHHCCCeEEEEeccccccccCCCccccCCCCCcccCCCcccchHH
Q 002110          154 GNSFG-AP-----------A------ILEDNLIHQLASNGKRVVMMGDDTWVQLFPHHFKKSYPYPSFNVKDLHTVDNGC  215 (965)
Q Consensus       154 ~~nf~-~~-----------~------i~~d~l~~ql~~~G~k~~~~Gd~tW~~LfP~~f~~~~~~~sf~v~D~~~vD~~v  215 (965)
                      ..|.. .+           .      ...++++..++++|++++.+   .|.    +    .           ...+ ..
T Consensus       193 ~~n~~~d~~~~~~~~~~~~~~~~~~~~~g~piw~~~~~~G~~ta~~---~wp----g----~-----------~~~~-~~  249 (831)
T 3nkq_A          193 VGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTF---FWS----V----S-----------IPHE-RR  249 (831)
T ss_dssp             CSSSEEETTTTEEECSSSSGGGSGGGCCSCCHHHHHHHTTCCBCCS---CCC----T----T-----------SCHH-HH
T ss_pred             ccCccccccccccccccccccCCcccccCCcHHHHHHHcCCceEEE---eCC----C----C-----------CCHH-HH
Confidence            76521 00           0      11235777788888877543   232    1    0           0012 23


Q ss_pred             HHHHHHHHh---cCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCC
Q 002110          216 IEHLLPSLY---EEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHG  292 (965)
Q Consensus       216 ~~~l~~~L~---~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHG  292 (965)
                      ++.+.+++.   +++|+++++|+.++|+.||.+||++++|.++++++|+.||+|++.|+++    |+.+||+|||+||||
T Consensus       250 v~~~~~~l~~~~~~~P~f~~ly~~~~D~~gH~~Gp~s~ey~~al~~vD~~IG~Ll~~Lk~~----GL~dnT~VI~TSDHG  325 (831)
T 3nkq_A          250 ILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQL----KLHRCVNVIFVGDHG  325 (831)
T ss_dssp             HHHHHHHHTSCTTTCCSEEEEEEEEEHHHHHHHCTTCGGGHHHHHHHHHHHHHHHHHHHHT----TCTTTCEEEEEESCC
T ss_pred             HHHHHHHHhcccccCCceEEEecCCcchhccccCCCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCCCEEEEEEcCCC
Confidence            445566664   5689999999999999999999999999999999999999999999986    588999999999999


Q ss_pred             CCCC
Q 002110          293 QTIN  296 (965)
Q Consensus       293 m~~~  296 (965)
                      |.+.
T Consensus       326 m~~v  329 (831)
T 3nkq_A          326 MEDV  329 (831)
T ss_dssp             CEEC
T ss_pred             CCCC
Confidence            9643


No 15 
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=99.88  E-value=2.2e-22  Score=234.01  Aligned_cols=269  Identities=13%  Similarity=0.090  Sum_probs=179.1

Q ss_pred             CCCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcC-CcceEEEEEecCCCCCcccccc--ceeecccCc
Q 002110           74 RPAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTK-RSARIFKAIADPPTTSLQRLKG--LTTGGLPTF  150 (965)
Q Consensus        74 ~~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~-g~~~~~~~~a~~PT~T~p~~~s--l~TG~~P~~  150 (965)
                      ..+.+|||+|++|++|+|.+..   ++..   ...+|+|++|++++ |. .+-++++..|.. .|+..+  ++||.+|..
T Consensus        28 ~~~~pNII~I~~Dsl~~~~l~~---~g~~---~~~TP~ld~La~~~~g~-~F~n~ys~~~~~-~~sra~~~llTG~~p~~   99 (436)
T 2w8d_A           28 KAEGKNVIYVSLESLQSFIIDY---KIDG---KEVTPFLNKLAHDNETF-YFDNFFHQTGQG-KTSDAEFMMENSLYPLA   99 (436)
T ss_dssp             TTTTCEEEEEEETTCCGGGTTC---EETT---EESSHHHHHHHHSSSCE-EESSEECCCCTT-HHHHHHHHHHHSCCCCS
T ss_pred             cCCCCcEEEEEECCCChhhccC---cCCC---CcCCchHHHHHhcCCeE-EECceeccCCCC-CcchhHHHHHhCCCCCC
Confidence            3456799999999999988742   2222   25799999999632 32 334578777743 344344  459999999


Q ss_pred             ccccccCCCCcCChhhHHHHHHHCCCeEEEEecc---cccc--ccC-CCccccCCCCCccc-----CCCcccchHHHHHH
Q 002110          151 IDVGNSFGAPAILEDNLIHQLASNGKRVVMMGDD---TWVQ--LFP-HHFKKSYPYPSFNV-----KDLHTVDNGCIEHL  219 (965)
Q Consensus       151 ~gv~~nf~~~~i~~d~l~~ql~~~G~k~~~~Gd~---tW~~--LfP-~~f~~~~~~~sf~v-----~D~~~vD~~v~~~l  219 (965)
                      +|+..+... .-...++.+.|+++||++++++..   .|..  .++ ..|+...+...|..     .+....|+.+++++
T Consensus       100 ~g~~~~~~~-~~~~~tl~~~Lk~~GY~T~~~h~~~~~~~~~~~~~~~~Gfd~~~~~~~~~~~~~~~~~~g~~d~~~~~~a  178 (436)
T 2w8d_A          100 QGSVFVNKA-QNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYDMNEENTKNYGMKDKPFFKES  178 (436)
T ss_dssp             SSCHHHHCT-TSCCCCHHHHGGGGTCEEEEEESSCTTGGGHHHHHHHTTCCEEECGGGSCCCGGGBCSSSBCHHHHHHHH
T ss_pred             CCcceeecC-CCchhHHHHHHHHCCCcEEEEeCCCcCcCChhhhhhcCCCceeecHhhCCCCcccccCCCCChHHHHHHH
Confidence            987543222 234578999999999999988532   1320  000 11222111111111     11112367778888


Q ss_pred             HHHHhc-CCCcEEEEEcCCcCccCcc---C---------CCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEE
Q 002110          220 LPSLYE-EDWDVLIAHFLGVDHAGHI---L---------GVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLL  286 (965)
Q Consensus       220 ~~~L~~-~~~dllilh~lgvD~~GH~---~---------Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllI  286 (965)
                      .++|++ ++|.++++++..+++.-+.   +         +.....|.++++++|+.||++++.|++.    |+.+||+||
T Consensus       179 ~~~l~~~~kPffl~l~~~~~H~P~~~p~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~Lk~~----gl~dnTiIv  254 (436)
T 2w8d_A          179 MPLLESLPQPFYTKFITLSNHFPFGMDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKD----GLYDKSIIV  254 (436)
T ss_dssp             HHHHHTSCSSEEEEEECCSSCTTCCCCTTSCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCSTTEEEE
T ss_pred             HHHHhhcCCCeEEEEcCCCCcCCCCCCcccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcCCeEEE
Confidence            888864 6799999999876442111   0         0112358899999999999999999986    588999999


Q ss_pred             EEcCCCCCCCCCC--------CCC--CC-C-C--cEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHH
Q 002110          287 VMGDHGQTINGDH--------GGG--SA-E-E--VETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFA  352 (965)
Q Consensus       287 VtsDHGm~~~G~H--------Gg~--s~-~-E--~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDia  352 (965)
                      ++||||... ++|        |..  +. + .  +++||++++|+ .++.                  .....++++||+
T Consensus       255 ~tsDHG~~~-~~~~~~~~~~~g~k~~~~~e~~~~~rVPlii~~Pg-~~g~------------------~~~~~~s~~Di~  314 (436)
T 2w8d_A          255 MYGDHYGIS-ENHNKAMAKVLGKDEITDYDNAQLQRVPLFIHAAG-VKGE------------------KVHKYAGDVDVA  314 (436)
T ss_dssp             EEECSCSSC-GGGHHHHHHHTTCSCCCHHHHHHTTBCCEEEEETT-SCCC------------------EECCCEEGGGHH
T ss_pred             EECCCCccc-ccchhhHHHhhCCCCCCcccccccceEeEEEEeCC-CCCc------------------eeccchhHHhHH
Confidence            999999742 333        321  22 2 2  69999999998 4332                  124568999999


Q ss_pred             HHHHHhhCCCCCCC-CCCCCcHHh
Q 002110          353 ATVSALLGVPFPFG-SIGRVSPEL  375 (965)
Q Consensus       353 PTLa~LlGipiP~~-~~G~~i~e~  375 (965)
                      |||+.++|++.|.. ..|+.+.+.
T Consensus       315 PTll~l~Gi~~p~~~~~G~sLl~~  338 (436)
T 2w8d_A          315 PTILHLLGVDTKDYLMSGSDILSK  338 (436)
T ss_dssp             HHHHHHTTCCCTTSCCCCCCTTST
T ss_pred             HHHHHHcCCCCCcccccCcccCCC
Confidence            99999999999964 579987554


No 16 
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=99.87  E-value=3.1e-22  Score=231.93  Aligned_cols=271  Identities=15%  Similarity=0.091  Sum_probs=178.5

Q ss_pred             CCCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcC-CcceEEEEEecCCCC-CccccccceeecccCcc
Q 002110           74 RPAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTK-RSARIFKAIADPPTT-SLQRLKGLTTGGLPTFI  151 (965)
Q Consensus        74 ~~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~-g~~~~~~~~a~~PT~-T~p~~~sl~TG~~P~~~  151 (965)
                      ..+.+|||+|++|++|++.+..   +..+   ...+|+|++|++++ |...+-++++..|.. |.++..+++||.+|..+
T Consensus        26 ~~~~pNIi~I~~Dsl~~~~~~~---~~~~---~~~TP~ld~La~~~~g~~~F~n~y~~~~~~~~sra~~~llTG~~~~~~   99 (424)
T 2w5q_A           26 VAKKKNIIKIHLESFQTFLINK---KVNG---KEVTPFLNKLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQ   99 (424)
T ss_dssp             TTTTCCEEEEEETTCCGGGTTC---EETT---EESSHHHHHHHTTCSSCEEETTEECCCCTTTHHHHHHHHHHSCCCCSS
T ss_pred             cCCCCeEEEEEECCCchhhccC---ccCC---CcCCCcHHHHHhCCCceeccCcccccCCCCCcchhHHHHHhcCCCCCC
Confidence            3456799999999999988642   1111   25799999999531 320334577776633 33333468999999999


Q ss_pred             cccccCCCCcCChhhHHHHHHHC-CCeEEEEecc---cccc--ccCC-CccccCCCCCcccC-----CCcccchHHHHHH
Q 002110          152 DVGNSFGAPAILEDNLIHQLASN-GKRVVMMGDD---TWVQ--LFPH-HFKKSYPYPSFNVK-----DLHTVDNGCIEHL  219 (965)
Q Consensus       152 gv~~nf~~~~i~~d~l~~ql~~~-G~k~~~~Gd~---tW~~--LfP~-~f~~~~~~~sf~v~-----D~~~vD~~v~~~l  219 (965)
                      |+..+... .-...++.+.|+++ ||++++++..   .|..  .++. .|+...+...|...     +....|+.+++++
T Consensus       100 g~~~~~~~-~~~~~tl~~~Lk~~~GY~T~~~h~~~~~~~~~~~~~~~~Gfd~~~~~~~~~~~~~~~~~~g~~d~~~~~~a  178 (424)
T 2w5q_A          100 GSAFSLKG-DNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDS  178 (424)
T ss_dssp             SCHHHHST-TSCCCCHHHHHHHHHCCEEEEEESSCTTGGGHHHHHHHHTCCEEECGGGSCCCGGGEETTEECHHHHHHHH
T ss_pred             CceeeecC-CchhhHHHHHHhhCCCCcEEEEECCCccccChhhhhhcCCCceEechhhcCCCccccCCCCCChHHHHHHH
Confidence            87543211 23457899999999 9999998532   1321  0100 12221111111111     1112367778888


Q ss_pred             HHHHhc-CCCcEEEEEcCCcCccCcc------C------CCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEE
Q 002110          220 LPSLYE-EDWDVLIAHFLGVDHAGHI------L------GVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLL  286 (965)
Q Consensus       220 ~~~L~~-~~~dllilh~lgvD~~GH~------~------Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllI  286 (965)
                      .++|++ ++|.++++++..++..-+.      .      +.....|.++++++|+.||++++.|++.    |+.+||+||
T Consensus       179 ~~~l~~~~~Pffl~~~~~~~H~P~~~p~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~Lk~~----g~~dnTiIV  254 (424)
T 2w5q_A          179 ANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKK----GLYDNSVIM  254 (424)
T ss_dssp             HHHHHTSCSSEEEEEECCSSCTTCCCCGGGCCSCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCSTTSEEE
T ss_pred             HHHHHhcCCCeEEEeeCCCCcCCCCCChhhccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcCCeEEE
Confidence            888864 6799999999776331110      0      0112358899999999999999999986    588999999


Q ss_pred             EEcCCCCCCCCCC--------C-CCC--CCC--cEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHH
Q 002110          287 VMGDHGQTINGDH--------G-GGS--AEE--VETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAA  353 (965)
Q Consensus       287 VtsDHGm~~~G~H--------G-g~s--~~E--~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaP  353 (965)
                      ++||||... +.|        | ..+  ++.  +++||++++|+ .++.                  .....++++||+|
T Consensus       255 f~sDHG~~~-~~~~~~~~~~~g~k~~~~e~~~~~rVPlii~~Pg-~~g~------------------~~~~~~s~~Di~P  314 (424)
T 2w5q_A          255 IYGDHYGIS-ENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPG-KSGG------------------INNEYAGQVDVMP  314 (424)
T ss_dssp             EEECSCSSC-GGGHHHHHHHHTSCCCHHHHHHTTBCCEEEECTT-CCCE------------------ECCCCEEGGGHHH
T ss_pred             EECCCCccc-ccchhhhhhhhCCCCCccccccccceeEEEEeCC-CCCc------------------eecccchHHHHHH
Confidence            999999732 333        2 112  222  79999999998 3321                  1245689999999


Q ss_pred             HHHHhhCCCCCCC-CCCCCcHHh
Q 002110          354 TVSALLGVPFPFG-SIGRVSPEL  375 (965)
Q Consensus       354 TLa~LlGipiP~~-~~G~~i~e~  375 (965)
                      ||+.++|++.|.. ..|+.+.+.
T Consensus       315 Tll~l~Gi~~~~~~~~G~sLl~~  337 (424)
T 2w5q_A          315 TILHLAGIDTKNYLMFGTDLFSK  337 (424)
T ss_dssp             HHHHHHTCCCTTSCCSCCCTTST
T ss_pred             HHHHHcCCCCCcccccCccccCC
Confidence            9999999999865 469876543


No 17 
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=99.84  E-value=6.5e-22  Score=227.86  Aligned_cols=203  Identities=15%  Similarity=0.184  Sum_probs=148.8

Q ss_pred             CCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccc
Q 002110           75 PAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVG  154 (965)
Q Consensus        75 ~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~  154 (965)
                      .+.+|||+|++||+|+|++...   .+    ...+|+|++|++ +|.  .++.++.+||+|.|++.||+||.+|..||+.
T Consensus        13 ~~~~~vv~i~~Dgl~~~~l~~~---~~----~~~tP~l~~L~~-~G~--~~~~~~~~Pt~t~p~~~sl~TG~~P~~hGi~   82 (406)
T 1ei6_A           13 LSSAPTIVICVDGCEQEYINQA---IQ----AGQAPFLAELTG-FGT--VLTGDCVVPSFTNPNNLSIVTGAPPSVHGIC   82 (406)
T ss_dssp             CCSSCEEEEECTTCCHHHHHHH---HH----TTSCHHHHHGGG-TSE--EEEEECCSSCCHHHHHHHHHHTSCHHHHCCC
T ss_pred             CCCCCEEEEEeCCCCHHHHHHH---Hh----ccCCcHHHHHHh-CCC--cccccccCCCcccccceeeeecCCcccCCcc
Confidence            3467999999999999987521   10    146999999995 554  2478899999999999999999999999997


Q ss_pred             ccCC------------CC-cCChhhHHHHHHHCCCeEEEEecccccc-ccCCCccc---cCCCCC-cc-----c------
Q 002110          155 NSFG------------AP-AILEDNLIHQLASNGKRVVMMGDDTWVQ-LFPHHFKK---SYPYPS-FN-----V------  205 (965)
Q Consensus       155 ~nf~------------~~-~i~~d~l~~ql~~~G~k~~~~Gd~tW~~-LfP~~f~~---~~~~~s-f~-----v------  205 (965)
                      .|..            .+ ....+++++.++++|++++.+|...+.. +.+..++.   ..+... +.     +      
T Consensus        83 ~n~~~~~~~~~~~~~~~~~~~~~~ti~~~l~~~G~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (406)
T 1ei6_A           83 GNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENILAR  162 (406)
T ss_dssp             SSEEEETTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCSEEEESTTCSSCCHHHHSCCCHHHH
T ss_pred             ccceeccccCeEEEecCcccccCCCHHHHHHHcCCeEEEEccccccCcCccccCCcccccCCccccccccccchhHHHHH
Confidence            6521            11 2356899999999999999998632211 11222210   000000 00     0      


Q ss_pred             -----CC--CcccchHHHHHHHHHHhcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 002110          206 -----KD--LHTVDNGCIEHLLPSLYEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGG  278 (965)
Q Consensus       206 -----~D--~~~vD~~v~~~l~~~L~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g  278 (965)
                           .+  ....|+.+++.+.+.+++++||+  +|+..+|+.||++||+++++.++++++|+.|++|++.         
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~a~~~i~~~~p~f--ly~~~~D~~gH~~g~~s~~~~~~l~~lD~~lg~ll~~---------  231 (406)
T 1ei6_A          163 VGMPVPSVYSADLSEFVFAAGLSLLTNERPDF--MYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQ---------  231 (406)
T ss_dssp             HTCCCCCSSSTHHHHHHHHHHHHHHHTTCCSE--EEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHT---------
T ss_pred             hCCCCccccchhHHHHHHHHHHHHHhcCCCeE--EEeCCcchhhccCCCCcHHHHHHHHHHHHHHHHHHhC---------
Confidence                 00  01235567777788887889999  5778899999999999999999999999999999875         


Q ss_pred             CCCCEEEEEEcCCCCCCCCCCCC
Q 002110          279 LHENTFLLVMGDHGQTINGDHGG  301 (965)
Q Consensus       279 ~~~dTllIVtsDHGm~~~G~HGg  301 (965)
                         +|+|||+|||||.+.+.|+|
T Consensus       232 ---~t~vivtSDHG~~~~~~~~~  251 (406)
T 1ei6_A          232 ---GAIVAITADHGMNAKTDAIG  251 (406)
T ss_dssp             ---TCEEEEECSCCCEECBCTTS
T ss_pred             ---CCEEEEEeCCCCccCCCccC
Confidence               49999999999987665544


No 18 
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=99.82  E-value=4.7e-21  Score=218.45  Aligned_cols=246  Identities=11%  Similarity=0.147  Sum_probs=165.5

Q ss_pred             CCCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCccccc
Q 002110           75 PAVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVG  154 (965)
Q Consensus        75 ~~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~  154 (965)
                      ++.+|||+|+.|++|++.+... .++.     .++|||++|++ .|. ++-++++.+.|.|.|++.+|+||.+|..++++
T Consensus        32 ~~~PNIi~I~~Dd~g~~~l~~~-~~g~-----~~TPniD~LA~-~G~-~ft~~y~~~v~~C~PsRasllTG~~~~~~~~~  103 (375)
T 2w5v_A           32 KTPKNVILLISDGAGLSQISST-FYFK-----SGTPNYTQFKN-IGL-IKTSSSREDVTDSASGATAFSCGIKTYNAAIG  103 (375)
T ss_dssp             CCCSEEEEEEETTCCHHHHHHH-HHHS-----SSCCGGGGCCE-EEE-EECCCSSCSSCCHHHHHHHHHHSSCCCTTCBS
T ss_pred             CCCCeEEEEEeCCCCHHHHHHH-Hhcc-----CCCCCHHHHHH-hhh-eeccccCCCCcccHHHHHHHHhCCCCCCCeee
Confidence            3567999999999999765200 0111     26999999984 443 33446665445599999999999999999876


Q ss_pred             ccCCCCcCChhhHHHHHHHCCCeEEEEeccccccc------c----CC--------------CccccCC--C--------
Q 002110          155 NSFGAPAILEDNLIHQLASNGKRVVMMGDDTWVQL------F----PH--------------HFKKSYP--Y--------  200 (965)
Q Consensus       155 ~nf~~~~i~~d~l~~ql~~~G~k~~~~Gd~tW~~L------f----P~--------------~f~~~~~--~--------  200 (965)
                      .+-.  ...+.++.+.|+++||+++++|+  |+--      +    |+              .|+...+  .        
T Consensus       104 ~~~~--~~~~~tl~e~lk~~GY~T~~vGK--whl~~~~p~~~~~~~p~r~~~~~i~~~~~~~gfd~~~g~~~~~~~~~~~  179 (375)
T 2w5v_A          104 VADD--STAVKSIVEIAALNNIKTGVVAT--SSITDATPASFYAHALNRGLEEEIAMDMTESDLDFFAGGGLNYFTKRKD  179 (375)
T ss_dssp             BCTT--SCBCCCHHHHHHHTTCEEEEEEE--EETTSHHHHTTTCCBSCTTCHHHHHHHHTTSCCCEEEEECTHHHHSCTT
T ss_pred             eCCC--CCccCCHHHHHHHCCCeEEEEeC--CCCCCCChhhhhhcCCCcccHHHHHHHhhccCCCEEEeCCccccccccC
Confidence            5422  23567899999999999999997  4310      0    21              1111000  0        


Q ss_pred             ----------CCcc--cCCCcc---------------------cc-------hHHHHHHHHHHh-cCCCcEEEEEcCCcC
Q 002110          201 ----------PSFN--VKDLHT---------------------VD-------NGCIEHLLPSLY-EEDWDVLIAHFLGVD  239 (965)
Q Consensus       201 ----------~sf~--v~D~~~---------------------vD-------~~v~~~l~~~L~-~~~~dllilh~lgvD  239 (965)
                                ..+.  +.+.++                     .+       ..+++++.+.++ +++|.++++....+|
T Consensus       180 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~i~~~~kpFfl~~~~~~~d  259 (375)
T 2w5v_A          180 KKDVLAILKGNQFTINTTALTDFSSIASNRKMGFLLADEAMPTMEKGRGNFLSAATDLAIQFLSKDNSAFFIMSEGSQID  259 (375)
T ss_dssp             CCCHHHHHHHTTEEEECSCCCCGGGTTTCSEEEEECSSSSCCCTTTTCTTHHHHHHHHHHHHHTGGGCCEEEEEEETTHH
T ss_pred             cccHHHHHHhCCCeeeecCHHHHhhccCCCceeEeccccCCcccccccccHHHHHHHHHHHHhhhCCCceEEEeecCcCC
Confidence                      0000  011000                     00       124556667774 356778888777889


Q ss_pred             ccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCC--CCCCCCCCC------------C----
Q 002110          240 HAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDH--GQTINGDHG------------G----  301 (965)
Q Consensus       240 ~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDH--Gm~~~G~HG------------g----  301 (965)
                      +.+|..  +...|.+.++++|+.|+++++.+++.       +||+||++|||  |....|+|+            |    
T Consensus       260 ~~~h~~--~~~~~~~~v~~~D~~vG~il~~L~~~-------gnTlviftsDhG~Gg~~~g~~~~~~~~~~~~~~~~K~~~  330 (375)
T 2w5v_A          260 WGGHAN--NASYLISEINDFDDAIGTALAFAKKD-------GNTLVIVTSDHETGGFTLAAKKNKREDGSEYSDYTEIGP  330 (375)
T ss_dssp             HHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-------SSEEEEEECSCEETTCBCBEEEEECSSSCEEEEEEEECC
T ss_pred             hhhcCc--cHHHHHHHHHHHHHHHHHHHHHHhhC-------CCEEEEEECcCCCCCcccCCCCcccccCcccccCCcccc
Confidence            998853  33455899999999999999999975       39999999999  332233332            1    


Q ss_pred             --C--CCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCC
Q 002110          302 --G--SAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVP  362 (965)
Q Consensus       302 --~--s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGip  362 (965)
                        .  .++.++||+++++|+...                     ....++++||+|||+.++|++
T Consensus       331 ~~~~~~e~g~rVP~iv~~Pg~~~---------------------~~~~v~~~Di~pTll~~agi~  374 (375)
T 2w5v_A          331 TFSTGGHSATLIPVFAYGPGSEE---------------------FIGIYENNEIFHKILKVTKWN  374 (375)
T ss_dssp             BCSCSSEECCCEEEEEESTTGGG---------------------GCEEEETTHHHHHHHHHHCCC
T ss_pred             CcCCCCCCCcEeEEEEECCCccc---------------------cCCceehhHHHHHHHHHhCCC
Confidence              1  344589999999998310                     134588999999999999986


No 19 
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=99.81  E-value=1.2e-20  Score=217.85  Aligned_cols=198  Identities=13%  Similarity=0.163  Sum_probs=144.4

Q ss_pred             CCCeEEEEEEcCCCccccCCcCCCCCCcccccCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccCcccccc
Q 002110           76 AVDRLVIIVLDALRFDFVAPSTFFKEPKPWMDKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPTFIDVGN  155 (965)
Q Consensus        76 ~~~kvVlIvIDgLR~D~l~~~~~~~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~~~gv~~  155 (965)
                      +.+|+|+|++||+|+|.+...   .+    ...+|+|++|++ +|.  .++.++..|++|.|++.||+||.+|..||+..
T Consensus        22 p~~~vvvI~iDgl~~~~l~~~---~~----~~~tP~L~~La~-~G~--~~~~~~~~Ps~T~ps~asl~TG~~P~~HGI~~   91 (427)
T 3szy_A           22 PRVPAIAVCLDGCEPAYLDAA---ID----AGLMPALKRIKE-RGA--VRLAHSVIPSFTNPNNLSIATGSPPAVHGICG   91 (427)
T ss_dssp             CSSCEEEEECTTCCHHHHHHH---HH----TTCCHHHHHHHH-HSE--EEEEECCSSBCHHHHHHHHHHTSCHHHHCCCS
T ss_pred             CCCCEEEEEECCCCHHHHHhh---hh----ccCChHHHHHHH-cCC--cceeeecCCCCcHhhHHHHHhCCCcccCCccc
Confidence            468999999999999987421   10    146999999995 454  24788999999999999999999999999976


Q ss_pred             cCC-C------------CcCChhhHHHHHHHCCCeEEEEeccccc-cccCCC----------ccccC---------CCCC
Q 002110          156 SFG-A------------PAILEDNLIHQLASNGKRVVMMGDDTWV-QLFPHH----------FKKSY---------PYPS  202 (965)
Q Consensus       156 nf~-~------------~~i~~d~l~~ql~~~G~k~~~~Gd~tW~-~LfP~~----------f~~~~---------~~~s  202 (965)
                      |.. .            .....+++++.++++|++++.++...+. .+.+..          |....         +...
T Consensus        92 n~~~d~~~~~~~~~~~~~~~~~~ti~~~l~~~G~~ta~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  171 (427)
T 3szy_A           92 NYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDN  171 (427)
T ss_dssp             SEEEETTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCCSSSCEEEEESTTGGGCCHHHHSSSC
T ss_pred             ceeeccccCcceeccccccCCCCcHHHHHHHcCCEEEEEecCccchhccCccccccCCCCceecccccccccchhhhHHH
Confidence            521 0            1245789999999999999999843111 011110          00000         0000


Q ss_pred             ----cc--cCC--CcccchHHHHHHHHHHhcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccC
Q 002110          203 ----FN--VKD--LHTVDNGCIEHLLPSLYEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQS  274 (965)
Q Consensus       203 ----f~--v~D--~~~vD~~v~~~l~~~L~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~  274 (965)
                          +.  ..+  ..+.|+.+++.+.+.+++.+||+++  +.++|++||++||+|+++.++++++|+.|+++++.     
T Consensus       172 v~~~~g~~~~~~~~~~~d~~~~~~a~~~~~~~~p~l~y--~~~~D~~gH~~G~~s~~~~~~~~~~D~~l~~l~~~-----  244 (427)
T 3szy_A          172 ASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMY--LTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGL-----  244 (427)
T ss_dssp             HHHHHTCCCCCSSSSHHHHHHHHHHHHHHHHTCCSEEE--EECCCHHHHHCCTTSHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHhCCCCccccccchhHHHHHHHHHHHHhcCCCEEE--EcccchhhccCCCCcHHHHHHHHHHHHHHHHHHhC-----
Confidence                00  000  0123666777777888888999965  56899999999999999999999999999999864     


Q ss_pred             CCCCCCCCEEEEEEcCCCCCCCC
Q 002110          275 GPGGLHENTFLLVMGDHGQTING  297 (965)
Q Consensus       275 ~~~g~~~dTllIVtsDHGm~~~G  297 (965)
                             ++.|||+|||||.+.+
T Consensus       245 -------~~~vivtsDHGm~~~~  260 (427)
T 3szy_A          245 -------GAAIVVTADHGMKPKH  260 (427)
T ss_dssp             -------TCEEEEECSCCCEECB
T ss_pred             -------CCEEEEEcCCCccccC
Confidence                   4899999999997654


No 20 
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=99.74  E-value=4.2e-18  Score=193.97  Aligned_cols=118  Identities=19%  Similarity=0.232  Sum_probs=90.5

Q ss_pred             CCCcEEEEEcCCcCc-cCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCCCCCCCCCC
Q 002110          226 EDWDVLIAHFLGVDH-AGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTINGDHGGGSA  304 (965)
Q Consensus       226 ~~~dllilh~lgvD~-~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~G~HGg~s~  304 (965)
                      .++++...+....|. .||.  .....|.++++++|+.|++|++.|+         |||+||+|||||. ..+.||....
T Consensus       287 ~~~~~~~~~~~~~d~~~~~~--~~~~~y~~~i~~~D~~vg~~l~~L~---------entliiftsDnG~-~~~~~~~~~~  354 (413)
T 3m7v_A          287 FTKGFSFTNLVDFDALYGHR--RNAHGYRDCLHEFDERLPEIIAAMK---------VDDLLLITADHGN-DPTYAGTDHT  354 (413)
T ss_dssp             CCSEEEEEEECHHHHHTTTT--TCHHHHHHHHHHHHHHHHHHHHTCC---------TTEEEEEECSSBC-CTTSSSSSCB
T ss_pred             cccccceecccccchhhhcc--hhHHHHHHHHHHHHhHHHHHHHhcC---------CCCEEEEEccCCC-CCCCCCCCCC
Confidence            456677777766664 4665  3457899999999999999999987         7999999999996 3455554443


Q ss_pred             CCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCCCCCCCcHHhhc
Q 002110          305 EEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFGSIGRVSPELYT  377 (965)
Q Consensus       305 ~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~~~G~~i~e~l~  377 (965)
                      . .+||+++++|+.+.+.                   ....++++||+||+++++|+++|.  .|+++.+.|-
T Consensus       355 ~-~~vp~~~~~p~~~~~~-------------------~~~~~~~~d~~pt~~~~~g~~~p~--~g~s~~~~l~  405 (413)
T 3m7v_A          355 R-EYVPLLAYSPSFTGNG-------------------VLPVGHYADISATIADNFGVDTAM--IGESFLDKLI  405 (413)
T ss_dssp             C-BCEEEEEECTTCSCCE-------------------ECCCEETTHHHHHHHHHHTCCCCS--SCCCCHHHHC
T ss_pred             C-eeEEEEEEECCCCCCC-------------------cCCCcEEehHHHHHHHHcCCCcCC--CChhHHHHHh
Confidence            3 3799999999854321                   134578899999999999999995  6999877554


No 21 
>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A
Probab=99.72  E-value=2.9e-17  Score=184.69  Aligned_cols=170  Identities=19%  Similarity=0.248  Sum_probs=129.4

Q ss_pred             hhhHHHHHHHCCCeEEEEeccccccccCCC-ccccCCCCCcccCCCcccchHHHHHHHHHHhcCCCcEEEEEcCCcCc-c
Q 002110          164 EDNLIHQLASNGKRVVMMGDDTWVQLFPHH-FKKSYPYPSFNVKDLHTVDNGCIEHLLPSLYEEDWDVLIAHFLGVDH-A  241 (965)
Q Consensus       164 ~d~l~~ql~~~G~k~~~~Gd~tW~~LfP~~-f~~~~~~~sf~v~D~~~vD~~v~~~l~~~L~~~~~dllilh~lgvD~-~  241 (965)
                      .+++++.|+++|+++..+|+  |..+|-+. +++..+     ..    -+..+++++.+.++++++|++++|+.++|. .
T Consensus       226 ~pTvld~L~~aG~~v~~VGK--i~Dif~g~Git~~~~-----~~----~~~~~~d~~i~~L~~~~~dfv~vn~~~~D~~~  294 (399)
T 3ot9_A          226 GRTVMNELKDSDYDVIAIGK--ISDIYDGEGVTESLR-----TK----SNMDGMDKLVDTLNMDFTGLSFLNLVDFDALF  294 (399)
T ss_dssp             SCCHHHHHHHTTCEEEEETT--HHHHTTTTTCSEEEC-----CS----SHHHHHHHHHHHHTSCCSEEEEEEECHHHHHT
T ss_pred             CCCHHHHHHHcCCeEEEecc--HHheecCCCccceec-----cC----ChHHHHHHHHHHHHhCCCCEEEEEecCCcccc
Confidence            47899999999999999987  44444321 222111     11    145678888999988889999999999998 9


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCCCCCCCCCCCCcEEEEEEEcCCCCCC
Q 002110          242 GHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTINGDHGGGSAEEVETSVFAMSFKKPPS  321 (965)
Q Consensus       242 GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~G~HGg~s~~E~~vpL~~~sp~~~~~  321 (965)
                      ||+.+  .+.|.++++++|++|+++++.+++         +.++|||||||+...  +++......++||++++|+.+++
T Consensus       295 GH~~~--~~~Y~~aIe~vD~~IGrIL~~L~e---------~~lVIiTSDHG~dp~--~~~t~ht~~~VPlIi~~Pgi~~g  361 (399)
T 3ot9_A          295 GHRRD--PQGYGEALQEYDARLPEVFAKLKE---------DDLLLITADHGNDPI--HPGTDHTREYVPLLAYSPSMKEG  361 (399)
T ss_dssp             TTTTC--HHHHHHHHHHHHTTHHHHHHHCCT---------TEEEEEECSSBCCSS--SSSSSCBCBCEEEEEECTTCTTC
T ss_pred             cccCC--HHHHHHHHHHHHHHHHHHHHHhhc---------CCeEEEEcCCCCCCC--CCCcCCCCCeEeEEEEECCCCCC
Confidence            99875  589999999999999999999983         349999999999432  22222223479999999985443


Q ss_pred             CCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCCCCCCCcHHhh
Q 002110          322 TMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFGSIGRVSPELY  376 (965)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~~~G~~i~e~l  376 (965)
                      ..                 .....+.++||+||++.++|++.|.  .|+++.+.+
T Consensus       362 ~~-----------------~~~~~~sl~DIaPTil~llGi~~P~--~G~SLl~~L  397 (399)
T 3ot9_A          362 GQ-----------------ELPLRQTFADIGATVAENFGVKMPE--YGTSFLNEL  397 (399)
T ss_dssp             CC-----------------BCCCBSSTHHHHHHHHHHHTCCCCS--SCCCCGGGC
T ss_pred             ce-----------------eECCCCEEecHHHHHHHHhCcCCCC--CCccHHHHh
Confidence            10                 0123478999999999999999998  999987765


No 22 
>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A
Probab=99.67  E-value=3.2e-16  Score=175.94  Aligned_cols=169  Identities=17%  Similarity=0.230  Sum_probs=127.4

Q ss_pred             hhhHHHHHHHCCCeEEEEeccccccccCCC-ccccCCCCCcccCCCcccchHHHHHHHHHHhc-CCC-cEEEEEcCCcCc
Q 002110          164 EDNLIHQLASNGKRVVMMGDDTWVQLFPHH-FKKSYPYPSFNVKDLHTVDNGCIEHLLPSLYE-EDW-DVLIAHFLGVDH  240 (965)
Q Consensus       164 ~d~l~~ql~~~G~k~~~~Gd~tW~~LfP~~-f~~~~~~~sf~v~D~~~vD~~v~~~l~~~L~~-~~~-dllilh~lgvD~  240 (965)
                      .+++++.++++|+++..+|+  |..+|.+. +++..      . .. .-+..+++++.+.+++ +++ |++++|+.++|.
T Consensus       230 ~pTvld~L~~aG~~V~~VGK--i~Dif~g~GiT~~~------~-~~-~~~~e~~d~~i~~l~~~~~~~dfi~vn~~~~Dm  299 (403)
T 2i09_A          230 APTVLNKLADAGVSTYAVGK--INDIFNGSGITNDM------G-HN-KSNSHGVDTLIKTMGLSAFTKGFSFTNLVDFDA  299 (403)
T ss_dssp             SCCHHHHHHHTTCEEEEETT--HHHHTTTTTCSEEC------C-CC-SSHHHHHHHHHHHHHCSSCCSEEEEEEECHHHH
T ss_pred             CCCHHHHHHHCCCeEEEEcc--hHHeecCCCccccc------c-CC-CCHHHHHHHHHHHHHhcCCCCCEEEEEeccCCc
Confidence            47899999999999999997  33344321 22211      0 10 1135678888899987 677 999999999995


Q ss_pred             -cCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCCCCCCCCCCCCcEEEEEEEcCCCC
Q 002110          241 -AGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTINGDHGGGSAEEVETSVFAMSFKKP  319 (965)
Q Consensus       241 -~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~G~HGg~s~~E~~vpL~~~sp~~~  319 (965)
                       +||+.+  .+.|.++++++|+.|+++++.++         ++|++|||||||.... .++..+.. ..+|+++++|+..
T Consensus       300 ~~GH~~d--~~~y~~aIe~vD~~LG~Il~aL~---------~~tllIITADHGndp~-~~~t~HT~-~~VPlIi~gpg~~  366 (403)
T 2i09_A          300 LYGHRRN--AHGYRDCLHEFDERLPEIIAAMK---------VDDLLLITADHGNDPT-YAGTDHTR-EYVPLLAYSPSFT  366 (403)
T ss_dssp             HTTTTTC--HHHHHHHHHHHHHHHHHHHHTCC---------TTEEEEEECSSBCCTT-SSSSSCBC-BCEEEEEECTTCS
T ss_pred             ccCcCCC--HHHHHHHHHHHHHHHHHHHHhhC---------CCCEEEEecCCCCCCC-CCCcCCCC-CceeEEEEECCCC
Confidence             999864  48999999999999999999987         6899999999998432 33333333 3799999999854


Q ss_pred             CCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCCCCCCCcHHhh
Q 002110          320 PSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFGSIGRVSPELY  376 (965)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~~~G~~i~e~l  376 (965)
                      ++..                  ..... ..||+||++.++|+|.|.  .|+++.+.+
T Consensus       367 ~g~~------------------l~~~~-l~DIaPTIldllGl~~P~--~G~Sll~~L  402 (403)
T 2i09_A          367 GNGV------------------LPVGH-YADISATIADNFGVDTAM--IGESFLDKL  402 (403)
T ss_dssp             CCEE------------------CCCEE-TTHHHHHHHHHTTCCCCS--SCCCCHHHH
T ss_pred             CCcC------------------cCCCE-EeeHHHHHHHHcCcCCCC--CCCcHHHHh
Confidence            3210                  01224 889999999999999998  899887654


No 23 
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=99.58  E-value=2.2e-14  Score=166.72  Aligned_cols=179  Identities=19%  Similarity=0.227  Sum_probs=127.2

Q ss_pred             ChhhHHHHHHHCCCeEEEEeccccc---c-ccCCCccc-cCCC-----CCcccCCCc----ccchHHHHHHHHHHhcCCC
Q 002110          163 LEDNLIHQLASNGKRVVMMGDDTWV---Q-LFPHHFKK-SYPY-----PSFNVKDLH----TVDNGCIEHLLPSLYEEDW  228 (965)
Q Consensus       163 ~~d~l~~ql~~~G~k~~~~Gd~tW~---~-LfP~~f~~-~~~~-----~sf~v~D~~----~vD~~v~~~l~~~L~~~~~  228 (965)
                      ..+++.+.|+++|+++..++...+.   . .|.+..+. ..+.     ++-.+..++    .-++.+++.+.+++++++|
T Consensus       313 ~~~TL~E~L~~~Gy~~~~IaetekyahvtfF~nGg~~~~~~G~dr~l~~sp~v~tYDl~p~ms~~ev~d~ai~~L~~~kp  392 (511)
T 1o98_A          313 LDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKY  392 (511)
T ss_dssp             CCSCHHHHHHHTTCCEEEEEEGGGHHHHTTTTTTSCCSCCTTEEEEEECCCSCSSGGGSTTTTHHHHHHHHHHHHHTTCC
T ss_pred             ccchHHHHHHHCCCcEEEEecccccCceeeecCCCcccccCCCcceecccCcccccccCccccHHHHHHHHHHHHHccCC
Confidence            3578999999999999888642221   0 11111110 0010     000011111    1235678888888987889


Q ss_pred             cEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCCC--CCCCCCC--C
Q 002110          229 DVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTIN--GDHGGGS--A  304 (965)
Q Consensus       229 dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~~--G~HGg~s--~  304 (965)
                      +++++||..+|..||..  +.++|.++++++|+.|+++++.+++.        +|++|+|||||+.+.  +.||...  .
T Consensus       393 dfi~lnf~~pD~~GH~~--~~~~y~~aIe~vD~~lGrll~~Lk~~--------gTlIIiTSDHG~~e~m~d~~Gk~~t~h  462 (511)
T 1o98_A          393 DAIILNYANPDMVGHSG--KLEPTIKAVEAVDECLGKVVDAILAK--------GGIAIITADHGNADEVLTPDGKPQTAH  462 (511)
T ss_dssp             SEEEEEECHHHHHHTTT--CHHHHHHHHHHHHHHHHHHHHHHHHT--------TCEEEEECSSBSTTCCBCTTSCBCCSC
T ss_pred             cEEEEeCCCCccccccc--CHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEECCCCccccccCCCCCcccCC
Confidence            99999999999999985  56889999999999999999999963        599999999998542  2234222  2


Q ss_pred             CCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCCCCCCCCCCcH
Q 002110          305 EEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPFPFGSIGRVSP  373 (965)
Q Consensus       305 ~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipiP~~~~G~~i~  373 (965)
                      ...++|+++++|+.+.                      ....+++||+|||+.++|+|.|....|+++.
T Consensus       463 t~~~VPlIi~~pgi~~----------------------~~~~sl~DIaPTIL~llGi~~P~~mdG~SLl  509 (511)
T 1o98_A          463 TTNPVPVIVTKKGIKL----------------------RDGGILGDLAPTMLDLLGLPQPKEMTGKSLI  509 (511)
T ss_dssp             BCCCEEEEECCTTCCB----------------------CSSEEGGGHHHHHHHHHTCCCCTTCCCCCSB
T ss_pred             CCeEEEEEEEECCccc----------------------CCCeEeHHHHHHHHHHhCcCCCCCCCCcccc
Confidence            3468999999987421                      1136799999999999999999999998753


No 24 
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=99.54  E-value=1.5e-14  Score=167.59  Aligned_cols=137  Identities=21%  Similarity=0.239  Sum_probs=107.1

Q ss_pred             chHHHHHHHHHHhcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCC
Q 002110          212 DNGCIEHLLPSLYEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDH  291 (965)
Q Consensus       212 D~~v~~~l~~~L~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDH  291 (965)
                      -..+++.+.+.|+++++|++++||.++|.+||..  +.+++.++++.+|++|++|++++++.        +|++||||||
T Consensus       398 a~ev~d~~i~al~~~~~DfI~vn~an~DmvGHtG--d~~a~~kAIE~vD~~LGrIl~aL~e~--------GtiIIITADH  467 (561)
T 3igz_B          398 SAAITEAAIEALKSGMYNVVRINFPNGDMVGHTG--DLKATITGVEAVDESLAKLKDAVDSV--------NGVYIVTADH  467 (561)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEEEECHHHHHHTTT--CHHHHHHHHHHHHHHHHHHHHHHHHT--------TCEEEEECSS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEecCChhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEEcCC
Confidence            3467888889998889999999999999999963  57899999999999999999999963        5999999999


Q ss_pred             CCCCC-C---CCCCC-----------CC-CCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHH
Q 002110          292 GQTIN-G---DHGGG-----------SA-EEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATV  355 (965)
Q Consensus       292 Gm~~~-G---~HGg~-----------s~-~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTL  355 (965)
                      |..+. +   .||+.           .. ...+|||++++|+..++..   ..         .   ........||+|||
T Consensus       468 Gn~e~m~d~~~~G~plrg~KG~~~e~t~HT~~~VPlII~gPg~~~g~~---l~---------~---~l~~~sL~DIAPTI  532 (561)
T 3igz_B          468 GNSDDMAQRDKKGKPMKDGNGNVLPLTSHTLSPVPVFIGGAGLDPRVA---MR---------T---DLPAAGLANVTATF  532 (561)
T ss_dssp             BSTTCCBCBCTTCCBCBCTTSCBCBCCSCBCCCEEEEEECTTSCTTEE---EC---------S---SCTTCBTHHHHHHH
T ss_pred             CCchhcccccccCCccccccccccccccccCceecEEEEcCCCCCCce---ec---------c---ccCceeehHHHHHH
Confidence            98642 2   34432           11 2256999999998643210   00         0   00235789999999


Q ss_pred             HHhhCCCCCCCCCCCCcH
Q 002110          356 SALLGVPFPFGSIGRVSP  373 (965)
Q Consensus       356 a~LlGipiP~~~~G~~i~  373 (965)
                      +.++|+|.|.++.|+++.
T Consensus       533 LdL~Gl~~P~em~G~~~~  550 (561)
T 3igz_B          533 INLLGFEAPEDYEPSLIY  550 (561)
T ss_dssp             HHHHTBCCCTTSCCCSEE
T ss_pred             HHHhCCCCCcCcCCcccc
Confidence            999999999999999763


No 25 
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=99.07  E-value=2.6e-10  Score=130.61  Aligned_cols=125  Identities=17%  Similarity=0.228  Sum_probs=90.7

Q ss_pred             HHHHHHHHhcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCCC
Q 002110          216 IEHLLPSLYEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQTI  295 (965)
Q Consensus       216 ~~~l~~~L~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~~  295 (965)
                      ++.+.+.++  ++|++++|+.++|..||+.  +.++|.++++.+|+.++++++++++        .++++|||||||+. 
T Consensus       284 ~~~~~~~l~--~~d~v~v~~~~~D~~GH~~--d~~~~~~aie~~D~~lg~ll~al~~--------~~~~liitaDHG~p-  350 (412)
T 2zkt_A          284 AKKAVELLK--DYDFVFLHFKPTDAAGHDN--KPKLKAELIERADRMIGYILDHVDL--------EEVVIAITGDHSTP-  350 (412)
T ss_dssp             HHHHHHHHH--HCSEEEEEECHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHTTSCT--------TTEEEEEECSSBCC-
T ss_pred             HHHHHHHhc--CCCEEEEcCccCChHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHh--------CCCEEEEECCCCCC-
Confidence            445556664  5899999999999999997  6789999999999999999999985        36999999999983 


Q ss_pred             CCCCCCCCCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhCCCC
Q 002110          296 NGDHGGGSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLGVPF  363 (965)
Q Consensus       296 ~G~HGg~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlGipi  363 (965)
                       ..|++.+  ...+|+++++|+.+++.. ..++..++      .......+++.||+||++.++|++.
T Consensus       351 -~~~~~Ht--~~~VP~ii~g~~~~~~~~-~~f~E~~~------~~g~l~~i~~~Di~pTil~llg~~~  408 (412)
T 2zkt_A          351 -CEVMNHS--GDPVPLLIAGGGVRTDDT-KRFGEREA------MKGGLGRIRGHDIVPIMMDLMNRSE  408 (412)
T ss_dssp             -TTTTSCB--CCCEEEEEESTTCCCCSC-CSCSHHHH------TTCTTEEEEGGGHHHHHHHHTTCCC
T ss_pred             -CCCCcCC--CCceeEEEEeCCcCCCcc-cccccccc------cCcccccccHHHHHHHHHHHhCCCc
Confidence             2333322  237999999988543311 11110000      0001225788999999999999983


No 26 
>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}
Probab=98.80  E-value=8.1e-09  Score=117.43  Aligned_cols=199  Identities=19%  Similarity=0.203  Sum_probs=119.8

Q ss_pred             CeEEEEEEcCCCccccCCcCCC-CCCcccccCChhHHHHHhcCCcceEEEEEec---CCCCCccccccceeecccCc--c
Q 002110           78 DRLVIIVLDALRFDFVAPSTFF-KEPKPWMDKLQVLQKLASTKRSARIFKAIAD---PPTTSLQRLKGLTTGGLPTF--I  151 (965)
Q Consensus        78 ~kvVlIvIDgLR~D~l~~~~~~-~~~~~~~~~~P~L~~L~~~~g~~~~~~~~a~---~PT~T~p~~~sl~TG~~P~~--~  151 (965)
                      +|||+++-||++...+.....+ +.........+.++++.  .|..  .+.-++   ..|-+.+.-.++.||.-+..  +
T Consensus         1 ~NVIl~igDGmg~~~~taaR~~~~~~~~~~~~~l~~d~~~--~G~~--~T~s~d~~~~vtDSA~~aTA~~tG~Kt~~~~i   76 (400)
T 3a52_A            1 MGMIIMVGDGMGPAYTSAYRYFQDNPDTEEIEQTVFDRLL--VGMA--STYPARESGYVTDSAASATALATGFKSYNGAI   76 (400)
T ss_dssp             CEEEEEEETTCCHHHHHHHHHHHCCTTSSSCCCCHHHHHE--EEEE--ECCCCGGGCSCCCHHHHHHHHHHSCCCCTTCB
T ss_pred             CcEEEEEeCCCCHHHHHHHHHHhcCcccCccccccccccc--ceee--eecCCCCCCcCCCchhhhHHHhhccccCCCeE
Confidence            5899999999997544311000 11000012356788764  2221  111112   34556677789999987765  3


Q ss_pred             cccccCCCCcCChhhHHHHHHHCCCeEEEEeccc-----------------ccc-------------ccC---CCcccc-
Q 002110          152 DVGNSFGAPAILEDNLIHQLASNGKRVVMMGDDT-----------------WVQ-------------LFP---HHFKKS-  197 (965)
Q Consensus       152 gv~~nf~~~~i~~d~l~~ql~~~G~k~~~~Gd~t-----------------W~~-------------LfP---~~f~~~-  197 (965)
                      ++..+  .  -...++.+.++++||++++++...                 |..             ++.   .+|.+. 
T Consensus        77 gv~~~--~--~~~~ti~e~ak~~G~~tGiVtt~~ithATPAa~~ah~~~R~~~~~IA~ql~~~~~dv~~GGG~~~f~~~L  152 (400)
T 3a52_A           77 AVDIN--K--RPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNYEAIAADMLKSDADVILGGGRKYFSEAL  152 (400)
T ss_dssp             SBCTT--C--CBCCCHHHHHHHTTCEEEEEEEEETTSHHHHHHHCCBSCTTCHHHHHHHHHHHTCSEEEEECGGGCCHHH
T ss_pred             EECCC--C--CCCcCHHHHHHHcCCceEEEeeeecCCCCchhhhcCCCccccHHHHHHHHhhcCCeEEEeCChhccChHH
Confidence            33221  1  134689999999999999986411                 110             000   011110 


Q ss_pred             ------CCCC------------------CcccCCCc-ccc-------hHHHHHHHHHHh-cCCCcEEEEEcCCcCccCcc
Q 002110          198 ------YPYP------------------SFNVKDLH-TVD-------NGCIEHLLPSLY-EEDWDVLIAHFLGVDHAGHI  244 (965)
Q Consensus       198 ------~~~~------------------sf~v~D~~-~vD-------~~v~~~l~~~L~-~~~~dllilh~lgvD~~GH~  244 (965)
                            .+|.                  -|...++. .+|       ...++++.+.|. +++..++++-...+||.||.
T Consensus       153 ~~~~~~~Gy~~v~~~~~l~~~~~~kllGLFa~~~m~y~~dr~~~PsL~emT~kAI~~L~kn~~GFFLmVEgg~ID~a~H~  232 (400)
T 3a52_A          153 VSQFSAKGYQHITELAQLDSITQPKVLGLFAEVQLPWVIDDTDANTLSKLTQKSLDLLSQNEKGFVLLVEGSLIDWAGHN  232 (400)
T ss_dssp             HHHHHHTTCEEECSGGGGGGCCSSCEEEECSSSSCCCGGGSSCSCHHHHHHHHHHHHHTTCTTCEEEEEEETHHHHHHHT
T ss_pred             HHHHHHCCCEEECCHHHHhhccCCCceeecCCCCCCccccCCCCCCHHHHHHHHHHHHHhCCCCeEEEecCccCchhhhh
Confidence                  0100                  01111110 112       123666777774 45556888999999999998


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCC
Q 002110          245 LGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQ  293 (965)
Q Consensus       245 ~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm  293 (965)
                      ..+  ..+...+.++|+.|+..++.+++.       +|||||||+|||.
T Consensus       233 nd~--~~al~e~~~fD~AV~~al~~~~~~-------~dTLIIVTADH~~  272 (400)
T 3a52_A          233 NDI--ATAMAEMQGFANAIEVVEQYIRQH-------PDTLLVVTADHNT  272 (400)
T ss_dssp             TCH--HHHHHHHHHHHHHHHHHHHHHHHC-------CSEEEEEECSCEE
T ss_pred             CcH--HHHHHHHHHHHHHHHHHHHHHhcC-------CCcEEEEeccCCC
Confidence            654  578889999999999999999964       6899999999987


No 27 
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=98.49  E-value=1.9e-07  Score=105.78  Aligned_cols=116  Identities=16%  Similarity=0.222  Sum_probs=72.5

Q ss_pred             HHHHHHhcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCCC-CC
Q 002110          218 HLLPSLYEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQT-IN  296 (965)
Q Consensus       218 ~l~~~L~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm~-~~  296 (965)
                      .+.+.++  ++|++++|+.++|.+||..  +-+.+.++++++|+.+++|++ ++         +++++|||+|||-. ..
T Consensus       283 ~~i~~l~--~~d~v~~n~~~~D~~GH~g--d~~~~~~aie~~D~~l~~i~~-l~---------~~~~liITaDHg~p~~~  348 (399)
T 3kd8_A          283 KAVDLTS--SHDFVLVNIKATDVAGHDG--NYPLKRDVIEDIDRAMEPLKS-IG---------DHAVICVTGDHSTPCSF  348 (399)
T ss_dssp             HHHHHTT--TCSEEEEEEECC------C--CHHHHHHHHHHHHHTTGGGGS-CT---------TTEEEEEEEC-------
T ss_pred             HHHHHHh--hCCEEEEEecCcchhhhcc--CHHHHHHHHHHHHHHHHHHHc-cC---------CCCEEEEECCCCCCCCC
Confidence            3444443  4899999999999999986  458899999999999999998 76         57899999999973 34


Q ss_pred             CCCCCCCCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhC
Q 002110          297 GDHGGGSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLG  360 (965)
Q Consensus       297 G~HGg~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlG  360 (965)
                      +.|.+.     .||+++++|+.++... ..|+..+|...      .. .+.-.|+.|.+...++
T Consensus       349 ~~HT~~-----pVP~ii~g~~~~~d~v-~~f~E~~~~~g------~l-~~~g~~lm~~~l~~~~  399 (399)
T 3kd8_A          349 KDHSGD-----PVPIVFYTDGVMNDGV-HLFDELSSASG------SL-RITSYNVMDILMQLAG  399 (399)
T ss_dssp             ----CC-----CEEEEEEETTCCCCSC-CCCSTTTGGGS------SE-EEEGGGHHHHHHHTTC
T ss_pred             CCCCCC-----CccEEEEcCCCCCCCC-CccCHHHHhCC------Cc-cccHHHHHHHHHHhcC
Confidence            455433     2999999998765432 23433322221      12 3567889998887664


No 28 
>1k7h_A Alkaline phosphatase; hydrolase, transferase, phosphomonoester, extended beta SHEE triad, metal triad; HET: NAG; 1.92A {Pandalus borealis} SCOP: c.76.1.1 PDB: 1shq_A* 1shn_A*
Probab=98.21  E-value=1.9e-06  Score=99.55  Aligned_cols=69  Identities=20%  Similarity=0.245  Sum_probs=56.2

Q ss_pred             HHHHHHHHHhcC-CCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCC
Q 002110          215 CIEHLLPSLYEE-DWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQ  293 (965)
Q Consensus       215 v~~~l~~~L~~~-~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm  293 (965)
                      .++++.+.|.++ +-.++++....+||.||...  ...+...+.++|+.|+.+++.+++        ++|+||||+|||.
T Consensus       290 MT~~ai~~L~~~~~GFfl~vE~~~iD~~gH~~d--~~~~~~e~~~fD~av~~~~~~~~~--------~dtLlivTADHg~  359 (476)
T 1k7h_A          290 MTKVAIEMLTKDENGFFLLVEGGRIDHMHHANQ--IRQSLAETLDMEEAVSMALSMTDP--------EETIILVTADHGH  359 (476)
T ss_dssp             HHHHHHHHHTTCTTCEEEEEEECHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHSCT--------TTEEEEEEESSEE
T ss_pred             HHHHHHHHHHhCCCceEEEecccccchhhcccc--HHHHHHHHHHHHHHHHHHHHhcCC--------cCcEEEEecccCC
Confidence            345566666543 44488899999999999864  467889999999999999999862        6999999999987


No 29 
>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*
Probab=98.13  E-value=3.5e-06  Score=97.55  Aligned_cols=68  Identities=19%  Similarity=0.222  Sum_probs=51.5

Q ss_pred             HHHHHHHHhc-CCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCC
Q 002110          216 IEHLLPSLYE-EDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQ  293 (965)
Q Consensus       216 ~~~l~~~L~~-~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm  293 (965)
                      ++.+.+.|++ .+-.++++-...+|+.||...  -..+.+.++++|+.|+.+++.+++        +||+||||+|||.
T Consensus       292 t~~ai~~L~~~~~Gffl~veg~~iD~~gH~~d--~~~~~~~~~~fD~al~~~~~~~~~--------~dtLliVTADH~~  360 (484)
T 1zed_A          292 TEAALRLLSRNPRGFFLFVEGGRIDHGHHESR--AYRALTETIMFDDAIERAGQLTSE--------EDTLSLVTADHSH  360 (484)
T ss_dssp             HHHHHHHHTTCTTCEEEEEEETTHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHSCT--------TTEEEEEEESCEE
T ss_pred             HHHHHHHHHhcCCcEEEEecccCcchhhhcCC--HHHHHHHHHHHHHHHHHHHHhcCC--------CCcEEEEecccCc
Confidence            3445555643 333355555668999999864  467889999999999999997652        6899999999987


No 30 
>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...
Probab=98.01  E-value=1.1e-05  Score=91.92  Aligned_cols=117  Identities=17%  Similarity=0.221  Sum_probs=82.9

Q ss_pred             HHHHHHHHHhcCC-CcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCC
Q 002110          215 CIEHLLPSLYEED-WDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQ  293 (965)
Q Consensus       215 v~~~l~~~L~~~~-~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm  293 (965)
                      .++.+.+.|++++ -.|++++-..+||.||...  ...+...+.++|+.|+.+++.+++.       +||+||||+|||.
T Consensus       302 MT~kAi~~L~~~~~GfFl~VEg~~iD~a~H~nd--~~~~~~e~~~fD~av~~a~~~~~~~-------~dTLiiVTADH~~  372 (449)
T 3tg0_A          302 MTDKAIELLSKNEKGFFLQVEGASIDKQDHAAN--PCGQIGETVDLDEAVQRALEFAKKE-------GNTLVIVTADHAH  372 (449)
T ss_dssp             HHHHHHHHHTTCSSCEEEEEEETHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-------SSEEEEEECSSBC
T ss_pred             HHHHHHHHHhhCCCcEEEEEeccccchhhccCC--HHHHHHHHHHHHHHHHHHHHHHhcC-------CCcEEEEeCCCCC
Confidence            3556667775432 3468888888999999854  3578889999999999999999864       6899999999997


Q ss_pred             CCC--CC----CC--------------------CCC---CCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccC
Q 002110          294 TIN--GD----HG--------------------GGS---AEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCIS  344 (965)
Q Consensus       294 ~~~--G~----HG--------------------g~s---~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (965)
                      ...  |.    -|                    ..+   -....||+++++|+-..                     ...
T Consensus       373 ~~~~~g~~~~~~g~~~~~~~~dg~~~~l~y~~g~~~se~HtG~dV~v~A~GP~A~~---------------------f~G  431 (449)
T 3tg0_A          373 ASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN---------------------VVG  431 (449)
T ss_dssp             SCEEECTTCCCSSEEEEEECTTSSEEEEEECSCSSSSCCCBCCCEEEEEESTTGGG---------------------GSE
T ss_pred             cccccCCCCCCcccccccccCCCCeeeeecccCCCCCCCcCCceeeEEeecCChhh---------------------cCc
Confidence            521  00    00                    000   11245777777776321                     134


Q ss_pred             ccccccHHHHHHHhhCC
Q 002110          345 SFQQLDFAATVSALLGV  361 (965)
Q Consensus       345 ~v~qiDiaPTLa~LlGi  361 (965)
                      ..+|.||.-.|...+|+
T Consensus       432 ~~eqt~i~~~m~~al~l  448 (449)
T 3tg0_A          432 LTDQTDLFYTMKAALGL  448 (449)
T ss_dssp             EEEHHHHHHHHHHHTTC
T ss_pred             ceeccHHHHHHHHHhCC
Confidence            58899999999999986


No 31 
>2x98_A Alkaline phosphatase; hydrolase; 1.70A {Halobacterium salinarum}
Probab=97.02  E-value=0.00093  Score=76.55  Aligned_cols=70  Identities=23%  Similarity=0.279  Sum_probs=48.8

Q ss_pred             HHHHHHHHHhc----CCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcC
Q 002110          215 CIEHLLPSLYE----EDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGD  290 (965)
Q Consensus       215 v~~~l~~~L~~----~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsD  290 (965)
                      .++.+.+.|++    ++-.++++-=..+||.+|...+  .... ..-+.|+.++..++..++..      ++||||||+|
T Consensus       233 Mt~~Ai~~L~~~~~~~kGFFLmVEgg~ID~a~H~n~~--~~~~-e~~~~d~av~~a~~~~~~~~------~dTLIIVTAD  303 (431)
T 2x98_A          233 MVDAGVDLLSSAGDPDKGFFLLVESGRVDHAGHANYP--AQVA-EQYEATQVAGQLVEYAETTA------EPTFLVSTGD  303 (431)
T ss_dssp             HHHHHHHHHCCSSCSSCCEEEEEEECSHHHHHHHTCT--THHH-HHHHHHHHHHHHHHHHHHCS------SCEEEEEEEE
T ss_pred             HHHHHHHHHHhccCCCCceEEEEeccccchhhccChH--HHHH-HHHHHHHHHHHHHHHHhcCC------CCeEEEEeCc
Confidence            34556666743    2245666766779999997543  2233 34567889999988887653      7899999999


Q ss_pred             CCC
Q 002110          291 HGQ  293 (965)
Q Consensus       291 HGm  293 (965)
                      |+.
T Consensus       304 H~~  306 (431)
T 2x98_A          304 HEC  306 (431)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            954


No 32 
>2w0y_A APH, alkaline phosphatase; hydrolase, halophilic; 1.7A {Halobacterium salinarum R1} PDB: 2x98_A
Probab=96.64  E-value=0.0015  Score=74.92  Aligned_cols=69  Identities=26%  Similarity=0.294  Sum_probs=55.3

Q ss_pred             HHHHHHHHhcC----CCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCC
Q 002110          216 IEHLLPSLYEE----DWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDH  291 (965)
Q Consensus       216 ~~~l~~~L~~~----~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDH  291 (965)
                      ++.+.+.|+++    +-.++++....+||.||...+  ..+...+.++|+. +.+++.+++.+      ++|+||||+||
T Consensus       277 t~kAi~~L~k~~~~~~GfFLmVEg~~iD~agH~nd~--~~~~~e~~~fD~a-~~a~~~~~~~~------~dTLiIVTADH  347 (473)
T 2w0y_A          277 VDAGVDLLSSAGDPDKGFFLLVESGRVDHAGHANYP--AQVAEQYEATQVA-GQLVEYAETTA------EPTFLVSTGDH  347 (473)
T ss_dssp             HHHHHHHHCCSSCSSCCEEEEEEECSHHHHHHHTCT--THHHHHHHHHHHH-HHHHHHHHHCS------SCEEEEEEEEE
T ss_pred             HHHHHHHHHhcCCCCCCeEEEeeccccChhhccCCH--HHHHHHHHHHHHH-HHHHHHHhcCC------CCcEEEEeCcC
Confidence            45556666543    233799999999999998654  6788899999999 99999998653      78999999999


Q ss_pred             CC
Q 002110          292 GQ  293 (965)
Q Consensus       292 Gm  293 (965)
                      |.
T Consensus       348 ~~  349 (473)
T 2w0y_A          348 EC  349 (473)
T ss_dssp             EE
T ss_pred             CC
Confidence            85


No 33 
>3e2d_A Alkaline phosphatase; cold-adaptation, metalloenzyme, dimer, psychrophilic bacteria, crystallography, hydrolase; 1.40A {Vibrio SP}
Probab=95.27  E-value=0.015  Score=67.20  Aligned_cols=69  Identities=28%  Similarity=0.374  Sum_probs=53.2

Q ss_pred             HHHHHHHHh-cCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCEEEEEEcCCCC
Q 002110          216 IEHLLPSLY-EEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGGLHENTFLLVMGDHGQ  293 (965)
Q Consensus       216 ~~~l~~~L~-~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g~~~dTllIVtsDHGm  293 (965)
                      ++.+++.|. +++-.++++-=..+||.+|...  .........++|+.|+..++..++.       +|||||||+||+.
T Consensus       249 T~kAI~~Lskn~~GFFLmVEgg~ID~a~H~nd--a~~al~E~~~fD~AV~~A~~~~~~~-------~dTLIIVTADH~t  318 (502)
T 3e2d_A          249 TQKALNILSKDEDGFFLMVEGGQIDWAGHSND--AGTMLHELLKFDEAIQTVYEWAKDR-------EDTIVIVTADHET  318 (502)
T ss_dssp             HHHHHHHHTTCTTCEEEEEEECSHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHTTC-------SSEEEEEEEEEEE
T ss_pred             HHHHHHHHhcCCCceEEEEechhhhhhhccCC--HHHHHHHHHHHHHHHHHHHHHhhcC-------CCeEEEEeCCCCC
Confidence            445556664 3455677777778999999854  3566678889999999999999754       7899999999964


No 34 
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp}
Probab=91.37  E-value=3.1  Score=48.34  Aligned_cols=223  Identities=13%  Similarity=0.053  Sum_probs=128.7

Q ss_pred             cCChhHHHHHhcCCcceEEEEEecCCCCCccccccceeecccC-----------ccc-cccc----CCC-----C-----
Q 002110          107 DKLQVLQKLASTKRSARIFKAIADPPTTSLQRLKGLTTGGLPT-----------FID-VGNS----FGA-----P-----  160 (965)
Q Consensus       107 ~~~P~L~~L~~~~g~~~~~~~~a~~PT~T~p~~~sl~TG~~P~-----------~~g-v~~n----f~~-----~-----  160 (965)
                      +.+|++..||+ . .+..-+.++..++-|.|++..+.||....           .-+ +.++    +..     .     
T Consensus       149 ~diP~~~aLA~-~-ftl~D~yf~sv~gpT~PNrl~l~sG~tG~~~~~~~~~~~d~~g~~~~d~~p~~~~~~~~~~~~~~~  226 (498)
T 2d1g_A          149 NTVTALWNYAQ-N-FALNDNTFGTTFGPSTPGALNLVAGANGPAMSPSGNLENIENNYIIDDPNPYYDDCSYGTSKSGDT  226 (498)
T ss_dssp             TTSHHHHHHHH-H-SEEESSEECSSSSCHHHHHHHHHHSCCCSEECTTCCTTTEETTEECSCCEESSCGGGSTTSTTSCT
T ss_pred             ccChHHHHHHH-h-hhhhhhhhccCCCCCCCCeeEEEecCCCcccCcccccccCCCcccccCCCcccccccccccccccc
Confidence            56899999995 2 33444567778888999999999997510           000 1111    110     0     


Q ss_pred             ------cCChhhHHHHHHHCCCeEEEEeccc---------------cccccC----CCccccCCCCCcc-cCC-------
Q 002110          161 ------AILEDNLIHQLASNGKRVVMMGDDT---------------WVQLFP----HHFKKSYPYPSFN-VKD-------  207 (965)
Q Consensus       161 ------~i~~d~l~~ql~~~G~k~~~~Gd~t---------------W~~LfP----~~f~~~~~~~sf~-v~D-------  207 (965)
                            .....|+.++|.++|..-..+-++.               |...+.    ++.....++..|. +.+       
T Consensus       227 ~~~~~~~~~~~Ti~d~L~~aGvSW~~Yq~~~~~~~~~~g~~g~~~~~~~~~~~~~~~Y~~~h~pF~~f~~~~~~~~~~p~  306 (498)
T 2d1g_A          227 NTAVAKITDGYNIGHYLTQKGITWGWFQGGFKPTSYSGKTAICDAMSTNKFGVKSRDYIPHHEPFNYWKETSNPHHLAPS  306 (498)
T ss_dssp             TSCEEEECSCCCHHHHHHHHTCCEEEEETTCSCSEEETTEEECCCEEECTTSCEEESCCGGGCGGGGSGGGCCTTCCCCS
T ss_pred             ccccccCcCCCCHHHHHHHcCCceEEccCCCCcccccCCcccccccccccccccccccccccchHHHhhhccCccccccc
Confidence                  1345789999999998877774321               000000    0000011111111 000       


Q ss_pred             ----Ccccch----HHHHHHHHHHh-cCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 002110          208 ----LHTVDN----GCIEHLLPSLY-EEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDNQSGPGG  278 (965)
Q Consensus       208 ----~~~vD~----~v~~~l~~~L~-~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~~~~~~g  278 (965)
                          ....|.    .-.+.+.+.++ .+=|.+.++-... ++-+|-. ..++      ..-|..+++++++|.+.+    
T Consensus       307 ~~~~~g~~~~~~~~~~l~~F~~d~~~g~LP~vs~i~p~~-~~d~Hp~-~~~~------~~g~~~v~~v~~al~~sp----  374 (498)
T 2d1g_A          307 DDKYIGSNDQANHQYDISEFWKALDQNNMPAVSYLKAPG-YQDGHGG-YSNP------LDEQEWLVNTINRIQQSK----  374 (498)
T ss_dssp             CGGGTTSBSTTTTEEEHHHHHHHHHTTCCCSEEEEECCG-GGSCCTT-TCCH------HHHHHHHHHHHHHHHTST----
T ss_pred             hhccccccccccccCCHHHHHHHHHcCCCCceEEEEcCC-CCCCCCC-CCCh------HHHHHHHHHHHHHHhcCc----
Confidence                000010    01233444443 3457888876543 3445632 1123      244889999999999764    


Q ss_pred             CCCCEEEEEEcCCCCCCCCCCCC-----------CCCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccc
Q 002110          279 LHENTFLLVMGDHGQTINGDHGG-----------GSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQ  347 (965)
Q Consensus       279 ~~~dTllIVtsDHGm~~~G~HGg-----------~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  347 (965)
                      .+++|+|||+=|-.. ...+|-.           .--...++|+++.||-.+.+.+                  .....+
T Consensus       375 ~W~~T~iiit~DE~~-G~~DHV~pP~~p~~G~~~~~GlG~RVP~~viSP~~k~G~V------------------~~~~~d  435 (498)
T 2d1g_A          375 DWDSTAIIIIYDDSD-GDYDHVYSPKSQFSDIKGRQGYGPRLPMLVISPYAKANYV------------------DHSLLN  435 (498)
T ss_dssp             TGGGEEEEEEESCCT-TCCCCCCCCCCTTTTSTTCCCCCCBCCEEEESTTBCTTEE------------------ECCCEE
T ss_pred             cccCcEEEEEEECCC-CCccCcCCCCcCCCCccCccCCCCcceEEEecCCCCCCce------------------eCCccc
Confidence            478999999998543 2234521           1112578999999997665522                  234577


Q ss_pred             cccHHHHHHHhhCCC
Q 002110          348 QLDFAATVSALLGVP  362 (965)
Q Consensus       348 qiDiaPTLa~LlGip  362 (965)
                      +.-+.-||...+|++
T Consensus       436 H~Silrtie~~~gl~  450 (498)
T 2d1g_A          436 QASVLKFIEYNWGIG  450 (498)
T ss_dssp             THHHHHHHHHHHTCC
T ss_pred             hhHHHHHHHHHhCCC
Confidence            889999999999998


No 35 
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=85.82  E-value=0.26  Score=55.83  Aligned_cols=42  Identities=17%  Similarity=0.128  Sum_probs=30.2

Q ss_pred             CCCCCCCCCCCcEEEEEEEcCCCCCCCCCCCCCCCcccccccccccccCccccccHHHHHH
Q 002110          296 NGDHGGGSAEEVETSVFAMSFKKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVS  356 (965)
Q Consensus       296 ~G~HGg~s~~E~~vpL~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa  356 (965)
                      .|.||+.  .|+++||++++| ++.+.. .               ...+.++.+|||||++
T Consensus       364 ~g~HG~~--~~~~~p~i~~Gp-i~~~~~-~---------------~~~~~~~~~diApt~~  405 (406)
T 1ei6_A          364 LRSHGGV--SEQKVPLIFNRK-LVGLDS-P---------------GRLRNFDIIDLALNHL  405 (406)
T ss_dssp             CEECCSG--GGCEEEEEESSC-BCCCC------------------CCCBGGGHHHHHHHCB
T ss_pred             CcCCCCc--ccccceEEEEEe-cccCCC-C---------------ceeccccceeeccccc
Confidence            3789987  579999999999 732110 0               0145689999999985


No 36 
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=72.26  E-value=1.3  Score=50.55  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=31.6

Q ss_pred             CCCCCCCCCCcEEEEEEEcC--CCCCCCCCCCCCCCcccccccccccccCccccccHHHHHHHhhC
Q 002110          297 GDHGGGSAEEVETSVFAMSF--KKPPSTMPSEFDTSSCEMDLDQKKTCISSFQQLDFAATVSALLG  360 (965)
Q Consensus       297 G~HGg~s~~E~~vpL~~~sp--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~qiDiaPTLa~LlG  360 (965)
                      |.||+.+  |.++||++.+|  +++.+.                   ..+..+.+|+|||-+.+.|
T Consensus       378 g~HG~~~--em~vp~i~~gp~~~~~~~~-------------------~~~~~~~~d~~~~~~~~~~  422 (427)
T 3szy_A          378 RSHGGLT--EQEVPFIVNRVLPELPNAP-------------------RLRNFDAFFYAVTAAAEAG  422 (427)
T ss_dssp             EECBSGG--GCEEEEEESSCCTTCCCTT-------------------TSBGGGHHHHHHHHHC---
T ss_pred             cCCCCcc--cccceEEEECCcccccccC-------------------ccCCcchhhhhhhhhhhcc
Confidence            7899887  88999999999  554432                   1345889999999988754


No 37 
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=31.28  E-value=21  Score=40.20  Aligned_cols=50  Identities=26%  Similarity=0.302  Sum_probs=30.5

Q ss_pred             CCeEEEEEEcCCCccccCCcCCCCCCcc-cccCChhHHHHHhcCCcceEEEEEecCC
Q 002110           77 VDRLVIIVLDALRFDFVAPSTFFKEPKP-WMDKLQVLQKLASTKRSARIFKAIADPP  132 (965)
Q Consensus        77 ~~kvVlIvIDgLR~D~l~~~~~~~~~~~-~~~~~P~L~~L~~~~g~~~~~~~~a~~P  132 (965)
                      ..|+|+|+.||+. |.-.+.  .+.++| -..++||+++|++ .|...+.  .+.+|
T Consensus         4 ~mK~i~ii~DG~~-D~p~~~--l~gkTpLe~A~tP~lD~lA~-~g~~Gl~--~~v~~   54 (399)
T 3kd8_A            4 MKSIILIVLDGLG-DRPGSD--LQNRTPLQAAFRPNLNWLAS-HGINGIM--HPISP   54 (399)
T ss_dssp             CCEEEEEEEESCC-CCCBGG--GTSBCHHHHSCCHHHHHHHH-TSEEEEE--ECCCC
T ss_pred             cceEEEEEecCCC-CCcchh--cCCCCchhhcCCccHHHHHh-cCccCce--ecCCC
Confidence            5699999999999 543211  111222 1257899999996 5544333  34444


No 38 
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=20.45  E-value=74  Score=31.45  Aligned_cols=51  Identities=6%  Similarity=-0.037  Sum_probs=27.3

Q ss_pred             HHHHHHHHHhcCCCcEEEEEcCCcCccCccCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Q 002110          215 CIEHLLPSLYEEDWDVLIAHFLGVDHAGHILGVDSVPMIEKLEQYNEILDKVIEVLDN  272 (965)
Q Consensus       215 v~~~l~~~L~~~~~dllilh~lgvD~~GH~~Gp~s~~~~~~l~~~D~~I~~I~~~L~~  272 (965)
                      +..++.+.+.+.+||++++.+..-| +.+..++..++.      +-+.+.++++.+++
T Consensus        66 ~l~r~~~~v~~~~Pd~vvi~~G~ND-~~~~~~~~~~~~------~~~~l~~ii~~~~~  116 (209)
T 4hf7_A           66 FLLRFREDVINLSPALVVINAGTND-VAENTGAYNEDY------TFGNIASMAELAKA  116 (209)
T ss_dssp             HHHHHHHHTGGGCCSEEEECCCHHH-HTTSSSSCCHHH------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEEEeCCCc-CccccccccHHH------HHHHHHHhhHHHhc
Confidence            4445555444568999998765444 444444444332      12234555666653


Done!