Query 002111
Match_columns 965
No_of_seqs 251 out of 1184
Neff 4.5
Searched_HMMs 46136
Date Thu Mar 28 16:45:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002111.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002111hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 1E-292 2E-297 2392.2 57.9 806 84-965 20-835 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 3E-266 6E-271 2303.3 71.6 785 96-959 1-794 (794)
3 PRK14985 maltodextrin phosphor 100.0 3E-264 7E-269 2283.0 72.8 787 87-960 5-797 (798)
4 cd04300 GT1_Glycogen_Phosphory 100.0 6E-264 1E-268 2291.1 73.0 789 93-959 1-797 (797)
5 PRK14986 glycogen phosphorylas 100.0 2E-263 4E-268 2283.8 76.9 801 83-964 8-815 (815)
6 PF00343 Phosphorylase: Carboh 100.0 7E-244 1E-248 2096.3 47.5 706 176-961 1-713 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 1E-213 3E-218 1844.3 48.3 737 88-961 5-750 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 4E-136 8E-141 1213.9 43.8 600 116-957 59-688 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 2E-132 5E-137 1161.3 42.8 571 147-957 1-599 (601)
10 cd03791 GT1_Glycogen_synthase_ 99.8 4.4E-18 9.5E-23 192.4 26.8 267 563-955 199-473 (476)
11 TIGR02095 glgA glycogen/starch 99.7 2.3E-16 4.9E-21 179.9 23.8 265 564-954 195-468 (473)
12 PRK00654 glgA glycogen synthas 99.6 1.6E-14 3.4E-19 165.3 24.1 264 564-954 187-458 (466)
13 PRK14098 glycogen synthase; Pr 99.6 3.3E-14 7.2E-19 164.6 26.7 268 563-957 209-483 (489)
14 PLN02939 transferase, transfer 99.5 1.4E-11 3.1E-16 150.6 31.7 268 563-954 682-962 (977)
15 PRK14099 glycogen synthase; Pr 99.4 1.5E-11 3.2E-16 142.6 21.2 265 564-954 199-474 (485)
16 PLN02316 synthase/transferase 98.7 8.4E-07 1.8E-11 110.9 21.4 176 602-834 786-961 (1036)
17 COG0297 GlgA Glycogen synthase 98.3 3.4E-05 7.4E-10 90.5 18.5 271 563-954 197-473 (487)
18 cd03793 GT1_Glycogen_synthase_ 97.0 0.019 4.2E-07 69.0 17.1 206 567-824 219-506 (590)
19 PLN00142 sucrose synthase 96.9 0.01 2.2E-07 73.9 14.2 145 679-844 564-716 (815)
20 TIGR02470 sucr_synth sucrose s 96.9 0.013 2.8E-07 72.8 15.0 144 679-843 541-692 (784)
21 TIGR02149 glgA_Coryne glycogen 96.9 0.012 2.6E-07 64.8 13.2 132 684-843 197-329 (388)
22 cd03821 GT1_Bme6_like This fam 96.8 0.0096 2.1E-07 62.7 11.6 132 684-844 199-330 (375)
23 cd01635 Glycosyltransferase_GT 96.8 0.0035 7.6E-08 61.9 7.3 120 693-842 109-229 (229)
24 PF00534 Glycos_transf_1: Glyc 96.7 0.0039 8.6E-08 61.0 7.2 132 684-844 11-142 (172)
25 cd03805 GT1_ALG2_like This fam 96.6 0.013 2.8E-07 64.6 11.0 147 685-849 208-354 (392)
26 cd03808 GT1_cap1E_like This fa 96.6 0.018 3.9E-07 60.1 11.0 129 685-844 185-313 (359)
27 TIGR03449 mycothiol_MshA UDP-N 96.5 0.043 9.2E-07 61.3 14.2 136 684-843 215-351 (405)
28 cd03813 GT1_like_3 This family 96.4 0.032 6.9E-07 65.0 13.4 124 685-835 290-413 (475)
29 cd03800 GT1_Sucrose_synthase T 96.3 0.044 9.6E-07 59.9 12.9 134 685-843 217-351 (398)
30 cd03792 GT1_Trehalose_phosphor 96.3 0.089 1.9E-06 58.5 15.3 134 684-842 186-321 (372)
31 cd03796 GT1_PIG-A_like This fa 96.2 0.031 6.8E-07 62.9 11.1 134 685-849 190-323 (398)
32 cd03818 GT1_ExpC_like This fam 96.0 0.05 1.1E-06 61.2 11.7 137 684-843 207-349 (396)
33 TIGR02468 sucrsPsyn_pln sucros 96.0 0.053 1.1E-06 69.3 12.8 185 685-959 476-671 (1050)
34 cd03807 GT1_WbnK_like This fam 96.0 0.086 1.9E-06 55.4 12.4 127 684-843 189-315 (365)
35 cd04962 GT1_like_5 This family 95.9 0.11 2.3E-06 56.6 13.2 126 684-842 193-318 (371)
36 cd03822 GT1_ecORF704_like This 95.9 0.14 3E-06 54.6 13.7 134 685-843 182-317 (366)
37 cd03809 GT1_mtfB_like This fam 95.8 0.1 2.2E-06 55.6 12.4 120 685-831 192-311 (365)
38 PRK15427 colanic acid biosynth 95.8 0.11 2.4E-06 59.5 13.4 128 688-843 222-353 (406)
39 TIGR02472 sucr_P_syn_N sucrose 95.8 0.12 2.6E-06 59.6 13.7 138 685-843 245-389 (439)
40 cd03795 GT1_like_4 This family 95.5 0.042 9E-07 58.9 8.2 128 686-844 189-316 (357)
41 PRK15490 Vi polysaccharide bio 95.2 0.21 4.5E-06 60.4 13.4 128 685-844 395-522 (578)
42 cd04949 GT1_gtfA_like This fam 95.2 0.071 1.5E-06 58.6 8.8 123 689-843 205-328 (372)
43 TIGR03088 stp2 sugar transfera 95.2 0.26 5.5E-06 54.5 13.1 131 685-843 191-321 (374)
44 PLN02949 transferase, transfer 95.0 0.28 6.1E-06 57.8 13.6 134 689-842 269-406 (463)
45 cd05844 GT1_like_7 Glycosyltra 94.9 0.26 5.5E-06 53.6 12.0 128 688-843 188-319 (367)
46 cd03817 GT1_UGDG_like This fam 94.6 0.16 3.4E-06 53.8 9.1 132 684-845 198-329 (374)
47 cd03804 GT1_wbaZ_like This fam 94.6 0.077 1.7E-06 58.0 7.0 113 690-843 197-309 (351)
48 PF11897 DUF3417: Protein of u 94.6 0.014 3.1E-07 57.0 1.2 43 115-160 74-118 (118)
49 cd03794 GT1_wbuB_like This fam 94.6 0.28 6E-06 51.9 10.9 129 685-843 217-348 (394)
50 cd03819 GT1_WavL_like This fam 94.5 0.13 2.8E-06 55.4 8.5 133 684-843 181-313 (355)
51 cd03801 GT1_YqgM_like This fam 94.5 0.23 5E-06 51.6 10.0 131 685-845 196-326 (374)
52 cd03799 GT1_amsK_like This is 94.5 0.09 1.9E-06 56.3 7.1 131 686-844 177-311 (355)
53 cd03811 GT1_WabH_like This fam 94.4 0.073 1.6E-06 55.3 6.1 130 684-845 185-314 (353)
54 PRK15484 lipopolysaccharide 1, 94.1 0.28 6.2E-06 55.5 10.5 136 684-842 189-325 (380)
55 TIGR02918 accessory Sec system 93.6 1 2.2E-05 53.8 14.1 122 689-843 320-442 (500)
56 cd03825 GT1_wcfI_like This fam 93.3 0.92 2E-05 48.9 12.1 124 684-843 187-313 (365)
57 PF08323 Glyco_transf_5: Starc 93.3 0.12 2.7E-06 55.6 5.4 31 196-226 13-43 (245)
58 cd03812 GT1_CapH_like This fam 93.1 0.37 8.1E-06 52.0 8.8 120 684-833 188-307 (358)
59 cd03806 GT1_ALG11_like This fa 93.0 0.7 1.5E-05 53.3 11.3 143 687-849 236-382 (419)
60 PLN02871 UDP-sulfoquinovose:DA 92.9 0.67 1.5E-05 53.9 11.1 124 685-844 260-384 (465)
61 cd03814 GT1_like_2 This family 92.6 1.5 3.3E-05 46.6 12.4 121 686-843 195-315 (364)
62 cd03820 GT1_amsD_like This fam 91.8 1.7 3.7E-05 45.2 11.4 125 687-843 177-302 (348)
63 cd03798 GT1_wlbH_like This fam 91.8 0.58 1.2E-05 49.0 7.9 129 685-843 199-327 (377)
64 cd04955 GT1_like_6 This family 91.0 2.2 4.7E-05 46.1 11.6 120 690-842 195-314 (363)
65 cd03823 GT1_ExpE7_like This fa 90.9 1 2.2E-05 47.6 8.8 126 686-845 189-314 (359)
66 PRK10307 putative glycosyl tra 90.4 3 6.6E-05 47.2 12.5 128 684-843 225-356 (412)
67 PRK15179 Vi polysaccharide bio 90.1 0.8 1.7E-05 56.9 8.2 128 685-844 514-641 (694)
68 cd03802 GT1_AviGT4_like This f 90.1 0.98 2.1E-05 48.3 7.9 122 690-844 173-294 (335)
69 cd03816 GT1_ALG1_like This fam 89.3 1.8 3.8E-05 49.8 9.6 141 686-850 230-372 (415)
70 cd04946 GT1_AmsK_like This fam 87.3 4.9 0.00011 46.1 11.6 128 688-843 230-359 (407)
71 PHA01630 putative group 1 glyc 85.6 3.5 7.5E-05 46.6 9.0 118 688-844 142-259 (331)
72 cd03788 GT1_TPS Trehalose-6-Ph 83.9 22 0.00048 42.0 15.0 132 686-827 262-400 (460)
73 cd04951 GT1_WbdM_like This fam 76.9 6.5 0.00014 42.3 7.0 125 684-842 184-308 (360)
74 PF13692 Glyco_trans_1_4: Glyc 76.4 6.6 0.00014 37.0 6.1 125 687-850 1-126 (135)
75 TIGR03087 stp1 sugar transfera 75.7 22 0.00048 40.3 11.1 110 686-826 222-332 (397)
76 PHA01633 putative glycosyl tra 71.8 14 0.00031 42.3 8.3 122 686-842 146-270 (335)
77 PRK09922 UDP-D-galactose:(gluc 70.3 25 0.00054 39.3 9.8 125 689-844 181-308 (359)
78 PLN02275 transferase, transfer 70.2 24 0.00051 40.0 9.7 141 689-849 214-363 (371)
79 TIGR02400 trehalose_OtsA alpha 53.5 1.2E+02 0.0027 36.1 11.9 134 687-830 258-398 (456)
80 PLN03063 alpha,alpha-trehalose 53.4 6.2E+02 0.013 32.7 18.7 129 688-829 279-417 (797)
81 PLN02501 digalactosyldiacylgly 49.2 60 0.0013 41.3 8.5 118 692-844 550-667 (794)
82 PRK10125 putative glycosyl tra 49.0 39 0.00084 39.3 6.7 55 785-844 301-355 (405)
83 PLN02846 digalactosyldiacylgly 33.5 1.2E+02 0.0026 36.5 7.7 119 691-844 231-349 (462)
84 PF14474 RTC4: RTC4-like domai 31.5 32 0.00069 34.2 2.1 32 405-436 85-117 (124)
85 TIGR03713 acc_sec_asp1 accesso 29.0 3.6E+02 0.0077 33.0 10.7 177 686-952 319-515 (519)
86 COG0438 RfaG Glycosyltransfera 28.5 3.2E+02 0.0069 27.9 8.8 125 689-844 200-326 (381)
87 COG0380 OtsA Trehalose-6-phosp 28.2 83 0.0018 38.2 5.1 84 748-834 335-425 (486)
88 PF14407 Frankia_peptide: Ribo 25.8 34 0.00073 30.6 1.0 41 152-192 2-42 (61)
89 PF00782 DSPc: Dual specificit 23.5 1.7E+02 0.0036 28.0 5.4 37 393-433 74-113 (133)
90 KOG0853 Glycosyltransferase [C 22.8 2.2E+02 0.0049 34.8 7.3 148 684-847 269-418 (495)
91 PF00814 Peptidase_M22: Glycop 22.4 44 0.00095 37.0 1.4 54 170-224 34-89 (268)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-292 Score=2392.25 Aligned_cols=806 Identities=54% Similarity=0.926 Sum_probs=781.8
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHH
Q 002111 84 SSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNA 163 (965)
Q Consensus 84 ~~~~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nn 163 (965)
....++.+++++|.+|+++++.+++..|++.+.|.|||.+|||.|+.+|++|+++|.+.++||||||||||+|||+|.|+
T Consensus 20 ~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvYYLSlEf~mGRaL~Nt 99 (843)
T KOG2099|consen 20 AGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVYYLSLEFYMGRALQNT 99 (843)
T ss_pred cCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeEeehHHhhhhHHHHH
Confidence 33467889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeee
Q 002111 164 IGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEV 243 (965)
Q Consensus 164 L~NLgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~ 243 (965)
++||||.++|.|||.+||+|+|+|+++|+|||||||||||||+||||||||||+|+|||||||+||+|+|+|++|||+|.
T Consensus 100 m~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF~QkI~~g~Q~E~ 179 (843)
T KOG2099|consen 100 MINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIFKQKITDGWQVEE 179 (843)
T ss_pred HHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhHHHHhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccc
Q 002111 244 AEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSA 323 (965)
Q Consensus 244 pd~Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~ 323 (965)
||+||+.|||||+.|+++++||+|||+|+..++| .+|++++.|.|+|||+|||||+|++||+||||+|+ ++++|||..
T Consensus 180 ~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWsak-a~~df~l~~ 257 (843)
T KOG2099|consen 180 PDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWSAK-APNDFDLKD 257 (843)
T ss_pred hHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeeccC-CCCCCCHHh
Confidence 9999999999999999999999999999988888 57999999999999999999999999999999999 777999999
Q ss_pred cCCCchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCccc-----ccccCCCCceEE
Q 002111 324 FNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANV-----NWEEFPEKVAVQ 398 (965)
Q Consensus 324 fn~gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~-----~l~~lp~kvaih 398 (965)
||.|||.+|+.+++.||+||.||||+|+..+||+||||||||+|+||||||||||+.+.+|.+ +|++||+|||||
T Consensus 258 fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~~~~~~FPdkVAiQ 337 (843)
T KOG2099|consen 258 FNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVRTNFEEFPDKVAIQ 337 (843)
T ss_pred ccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccccccchhhCcHhheee
Confidence 999999999999999999999999999999999999999999999999999999998877643 599999999999
Q ss_pred eCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHH
Q 002111 399 MNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVS 478 (965)
Q Consensus 399 lNDtHpalai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~ 478 (965)
||||||+||||||||+|||.+||+|++||+||++||||||||+||||||+||++||++|||||+||||+||.+|++.|.+
T Consensus 338 lNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy~In~~~l~~i~~ 417 (843)
T KOG2099|consen 338 LNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIYEINQRFLQTVAA 417 (843)
T ss_pred ccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCchhhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhc
Q 002111 479 EYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAV 558 (965)
Q Consensus 479 ~~~~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 558 (965)
+||+ |.|++++||||| |
T Consensus 418 ~fp~-----D~drlrrmsiie---------------------------------------------e------------- 434 (843)
T KOG2099|consen 418 KFPG-----DVDRLRRMSIIE---------------------------------------------E------------- 434 (843)
T ss_pred HCCC-----cHHHHhhhhhhh---------------------------------------------c-------------
Confidence 9998 999999999998 3
Q ss_pred CCCCCeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 002111 559 QEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 638 (965)
Q Consensus 559 ~~~~~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W 638 (965)
.++++++|||+||++|||+|||||+|||+|+|+.+|+||+++||+||+||||||||||||.+|||.|++||+++|| ++|
T Consensus 435 ~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ig-e~~ 513 (843)
T KOG2099|consen 435 NSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIG-EEW 513 (843)
T ss_pred CCccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhh-hHh
Confidence 0245899999999999999999999999999999999999999999999999999999999999999999999999 599
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 002111 639 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 718 (965)
Q Consensus 639 ~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik 718 (965)
++|+++|.+|++|++|++||++|+++|++||.+|++||++.+|+.+||++|||+|||||||||||+|||||+|+||++||
T Consensus 514 i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK 593 (843)
T KOG2099|consen 514 ITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIK 593 (843)
T ss_pred hhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 002111 719 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 798 (965)
Q Consensus 719 ~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nis 798 (965)
+ +|. +.++|||+||||||+|+|++||+|||||++||++|||||.|+++|||||||||+||+||+||||||||||||
T Consensus 594 ~-e~~---k~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~IS 669 (843)
T KOG2099|consen 594 E-EPA---KAFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQIS 669 (843)
T ss_pred h-hhh---hccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhh
Confidence 8 555 448999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhc
Q 002111 799 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKS 876 (965)
Q Consensus 799 tag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~--~~~~~~~~~~l~~v~d~i~~ 876 (965)
|||+||||||||||||||||+|||||||||||+||+|+||+||||+++++|+.||+++ +...|.++|++++|+++|.+
T Consensus 670 TAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~s 749 (843)
T KOG2099|consen 670 TAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIES 749 (843)
T ss_pred hccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999996 33357899999999999999
Q ss_pred CCCCccc---HHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHH
Q 002111 877 GVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 953 (965)
Q Consensus 877 g~f~~~~---f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa 953 (965)
|.|++++ |.++.+.|.++ |+|+|++||+||++||++|+++|+||++|++|+|+|||+||+|||||||+|||
T Consensus 750 G~Fsp~~pd~fkd~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa 823 (843)
T KOG2099|consen 750 GFFSPKNPDEFKDIVNMLMYH------DYFLVFADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYA 823 (843)
T ss_pred CccCCCCchHHHHHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHH
Confidence 9999986 77788888764 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCC
Q 002111 954 RDIWNIIPVELP 965 (965)
Q Consensus 954 ~~IW~i~p~~~~ 965 (965)
++||+|+|+++|
T Consensus 824 ~eIWnvep~~~~ 835 (843)
T KOG2099|consen 824 REIWNVEPSELP 835 (843)
T ss_pred HHhcCCCcccCC
Confidence 999999999865
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=2.8e-266 Score=2303.28 Aligned_cols=785 Identities=52% Similarity=0.894 Sum_probs=763.6
Q ss_pred HHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhhcCchHHHHH
Q 002111 96 IQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAE 175 (965)
Q Consensus 96 i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~NLgl~~~~~e 175 (965)
|.+||.+++|+++++|++.++|+|||.+|||+|+++|.+|+++|.+.+.|+||||||||||||+|.|||+||||++++++
T Consensus 1 ~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~nlgl~~~~~~ 80 (794)
T TIGR02093 1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80 (794)
T ss_pred CHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEehhhhcchHHHHHHHhCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeeccccccCCCCcc
Q 002111 176 ALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWE 255 (965)
Q Consensus 176 aL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~Wl~~gnPwe 255 (965)
||++||++|++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+|+..++|||
T Consensus 81 ~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe 160 (794)
T TIGR02093 81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160 (794)
T ss_pred HHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEeCCEeeeCCC-CC--eeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCCCchhhH
Q 002111 256 IERNDVSYPVKFYGKIVPGSD-GK--SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKA 332 (965)
Q Consensus 256 i~r~d~~~~V~f~G~v~~~~d-G~--~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a 332 (965)
++|++.+|+|+|+|+|+...+ |+ .+|++++.|+|||||+|||||+|+++|+||||+|+ +.+.|||..||.|||.+|
T Consensus 161 ~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a 239 (794)
T TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEA 239 (794)
T ss_pred eecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhh
Confidence 999999999999999976543 63 44999999999999999999999999999999999 577899999999999999
Q ss_pred HHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHH
Q 002111 333 AEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELI 412 (965)
Q Consensus 333 ~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpalai~ELm 412 (965)
+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+ ..|+.||++++||||||||||||||||
T Consensus 240 ~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~---~~l~~l~~~~~ihlNDtHpalai~Elm 316 (794)
T TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH---PDLSDFPKKVAIQLNDTHPALAIPELM 316 (794)
T ss_pred hhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC---CChhhCCcceEEEecCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 489999999999999999999999999
Q ss_pred HHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHH
Q 002111 413 RILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRL 492 (965)
Q Consensus 413 RiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~~~~~~l 492 (965)
|+|||++|++|++||+||++||+||||||||||||+||++||+++||||++||++||++|+..+...+|+ +++++
T Consensus 317 R~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~-----d~~~~ 391 (794)
T TIGR02093 317 RLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPG-----DEAKI 391 (794)
T ss_pred HHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCC-----cHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeeeeeeeec
Q 002111 493 KETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCV 572 (965)
Q Consensus 493 ~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~MA~Lal 572 (965)
.+|+||+ + +++++||||+||+
T Consensus 392 ~~~sii~---------------------------------------------~--------------~~~~~v~Ma~LAi 412 (794)
T TIGR02093 392 RRMSIIE---------------------------------------------E--------------GQSKRVRMANLAI 412 (794)
T ss_pred hheeeee---------------------------------------------c--------------CCCCEEehHHHHH
Confidence 9999999 4 3335899999999
Q ss_pred ccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcC
Q 002111 573 VGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFA 652 (965)
Q Consensus 573 ~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~~l~~~~ 652 (965)
++||+|||||+|||+|+|+++|++|+++||+||+|||||||||||+.+|||+|++||+++||+ +|++|++.|++|++++
T Consensus 413 ~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~ 491 (794)
T TIGR02093 413 VGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGD-DWLTDLDLLKKLEPYA 491 (794)
T ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcCc-hhhhcHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCe
Q 002111 653 DNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPR 732 (965)
Q Consensus 653 dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr 732 (965)
+|++|+++|+++|++||++|++||++++|+.+||++|||+|||||||||||+||||+|++||.+||+ +|+.. ++||
T Consensus 492 ~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~---~~P~ 567 (794)
T TIGR02093 492 DDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKE-DPPKD---IVPR 567 (794)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHh-CCCcC---CCCe
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 77654 7899
Q ss_pred EEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchh
Q 002111 733 VCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKF 812 (965)
Q Consensus 733 ~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKf 812 (965)
||||||||||+|.+||+|||+|++||++||+||+++++|||||||||+||+||+||||||||+||||||+||||||||||
T Consensus 568 ~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~ 647 (794)
T TIGR02093 568 TVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKF 647 (794)
T ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCccc---HHH
Q 002111 813 AMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN---YDE 886 (965)
Q Consensus 813 amNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f~~~~---f~~ 886 (965)
||||||||||||||||||+|+||+||+|+||++++||.++|+.+ |++ |+.+|+|++|+|+|.+|.|++.+ |++
T Consensus 648 alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~ 726 (794)
T TIGR02093 648 MLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKG-YNPREYYEADPELKRVLDLISSGTFSPGDPGLFRP 726 (794)
T ss_pred HhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHHHHcC-CCchhcccCCHHHHHHHHHHhcCCCCCCCchHHHH
Confidence 99999999999999999999999999999999999999999887 664 78999999999999999998764 999
Q ss_pred HHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcc
Q 002111 887 LMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 959 (965)
Q Consensus 887 l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i 959 (965)
||++|..+ +|+|||++||+||++||++|+++|+|+++|++|||.|||+||+|||||||+|||++||++
T Consensus 727 l~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 794 (794)
T TIGR02093 727 LYDSLLNH-----GDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794 (794)
T ss_pred HHHHHccC-----CCeeeeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCc
Confidence 99999876 899999999999999999999999999999999999999999999999999999999985
No 3
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=3.4e-264 Score=2283.00 Aligned_cols=787 Identities=42% Similarity=0.739 Sum_probs=766.9
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhh
Q 002111 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (965)
Q Consensus 87 ~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~N 166 (965)
.++++|+++|.+||.+++|+++.+|++.++|+|||.+|||+|+++ +++|.+.+.|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~----~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~n 80 (798)
T PRK14985 5 FNKKQFQAALTRQWQRFGLNSAAEMTPRQWWQAVSAALAELLRAQ----PAAKPVANQRHVNYISMEFLIGRLTGNNLLN 80 (798)
T ss_pred CCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHH----HHHHhhcCCcEEEEechhhhccHHHHHHHHh
Confidence 467899999999999999999999999999999999999999998 6778888999999999999999999999999
Q ss_pred cCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeeccc
Q 002111 167 LGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAED 246 (965)
Q Consensus 167 Lgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~ 246 (965)
|||+++++|||++||+||++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|++|+|+|.||.
T Consensus 81 lgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~ 160 (798)
T PRK14985 81 LGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (798)
T ss_pred cCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCC
Q 002111 247 WLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNA 326 (965)
Q Consensus 247 Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~ 326 (965)
|+..++|||++|++..++|+|+|+|+.. +|+.+|++++.|.|||||+|||||+|+++|+||||+|++ ..+|||..||+
T Consensus 161 Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~-~~~~~l~~fn~ 238 (798)
T PRK14985 161 WHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQATH-AHPFDLTKFND 238 (798)
T ss_pred cccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcCC-CCccCHHHcCC
Confidence 9999999999999999999999999754 788899999999999999999999999999999999995 55999999999
Q ss_pred CchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhh
Q 002111 327 GDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTL 406 (965)
Q Consensus 327 gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpal 406 (965)
|||.+|+++++.+|.||++|||+|++++||+|||||||||||||||||||||++.+ +.|+.||++++||||||||||
T Consensus 239 gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~~---~~l~~l~~~~~ihlNDtHpal 315 (798)
T PRK14985 239 GDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG---RKLHELPDYEVIQLNDTHPTI 315 (798)
T ss_pred cchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChhhCCCCcEEEecCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999865 689999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCch
Q 002111 407 CIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPD 486 (965)
Q Consensus 407 ai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~ 486 (965)
|||||||+|||++|++|++||+||++||+||||||||||||+||++||+++||||++||++||++|+..+...||+
T Consensus 316 ai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~---- 391 (798)
T PRK14985 316 AIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPG---- 391 (798)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeee
Q 002111 487 LLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVR 566 (965)
Q Consensus 487 ~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~ 566 (965)
+.+++.+|+||+ + ++||
T Consensus 392 -d~~~~~~~sii~---------------------------------------------~-----------------~~v~ 408 (798)
T PRK14985 392 -DKKVWAKLAVVH---------------------------------------------D-----------------KQVR 408 (798)
T ss_pred -cHHHhhhhhhcc---------------------------------------------C-----------------Ceee
Confidence 899999999998 4 4899
Q ss_pred eeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHH
Q 002111 567 MANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLA 646 (965)
Q Consensus 567 MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~ 646 (965)
||+||+++||+|||||+||++|+++.||+||+++||+||+|||||||||||+.+|||+|++||+++||+ +|++|++.|+
T Consensus 409 Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~ 487 (798)
T PRK14985 409 MANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKTLKK-EWANDLDQLI 487 (798)
T ss_pred hHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCc-chhhChHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 8999999999
Q ss_pred HhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhh
Q 002111 647 ELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERK 726 (965)
Q Consensus 647 ~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~ 726 (965)
+|+++++|++|+++|+++|++||.+|++||++++|+.+||++|||+|||||||||||+||||+|++||.+|++ +|..+
T Consensus 488 ~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~-~p~~~- 565 (798)
T PRK14985 488 NLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD- 565 (798)
T ss_pred HhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHh-CCCcC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 77655
Q ss_pred ccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCC
Q 002111 727 AKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASG 806 (965)
Q Consensus 727 ~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASG 806 (965)
++||||||||||||+|.+||+|||+|++||++||+||+++++|||||||||+||+||+||||||||+||||||+||||
T Consensus 566 --~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASG 643 (798)
T PRK14985 566 --RVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASG 643 (798)
T ss_pred --CCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCccc
Q 002111 807 TSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN 883 (965)
Q Consensus 807 TSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f~~~~ 883 (965)
||||||||||||||||||||||||+++||++|+|+||++++||..+|.++ |++ |+.||+|++|+|+|.+|.|++.+
T Consensus 644 TsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v~d~i~~g~f~~~~ 722 (798)
T PRK14985 644 TGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGD 722 (798)
T ss_pred cchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999887 664 78999999999999999998765
Q ss_pred ---HHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhccc
Q 002111 884 ---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNII 960 (965)
Q Consensus 884 ---f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~ 960 (965)
|++||++|..+ +|+|||++||+||++||++|+++|+|+++|++|||+|||+||+|||||||+|||++||+++
T Consensus 723 ~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~~ 797 (798)
T PRK14985 723 KHAFDQMLHSLKQG-----GDPYLVLADFAAYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK 797 (798)
T ss_pred chhHHHHHHHHhhC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHccCCcCcHHHHHHHHHHhhCCC
Confidence 99999999876 8999999999999999999999999999999999999999999999999999999999985
No 4
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=5.6e-264 Score=2291.08 Aligned_cols=789 Identities=53% Similarity=0.903 Sum_probs=765.2
Q ss_pred HHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhhcCchHH
Q 002111 93 ASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGA 172 (965)
Q Consensus 93 ~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~NLgl~~~ 172 (965)
+++|.+||.+++|+++++|++.++|+|||.+|||+++++|.+|+++|.+.+.|+||||||||||||+|.|||+||||+++
T Consensus 1 ~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~L~nnl~nLgl~~~ 80 (797)
T cd04300 1 KKAIVDHLEYTLGKDPEEATDRDLYQALAYAVRDRLVERWNRTQQYYYDKDAKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80 (797)
T ss_pred ChHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEchhhhcchHHHHHHHhCCcHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeeccccccCCC
Q 002111 173 YAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGN 252 (965)
Q Consensus 173 ~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~Wl~~gn 252 (965)
+++||++||++|++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|++|+|+|.||+|+..++
T Consensus 81 ~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~ 160 (797)
T cd04300 81 VREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGN 160 (797)
T ss_pred HHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCceEEEEeCCEeeeCCC-CCe--eeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCCCch
Q 002111 253 PWEIERNDVSYPVKFYGKIVPGSD-GKS--HWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDH 329 (965)
Q Consensus 253 Pwei~r~d~~~~V~f~G~v~~~~d-G~~--~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy 329 (965)
|||++|++.+|+|+|+|+++...+ |+. +|++++.|+|+|||+|||||+++++|+||||+++ +.+.|||+.||.|||
T Consensus 161 pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy 239 (797)
T cd04300 161 PWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDY 239 (797)
T ss_pred CceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCch
Confidence 999999999999999999975443 643 4999999999999999999999999999999999 667899999999999
Q ss_pred hhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHH
Q 002111 330 TKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIP 409 (965)
Q Consensus 330 ~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpalai~ 409 (965)
.+|+++++.+|.||++|||+|++++||+|||||||||||||+|||||+|++.++ +++.||++++|||||||||||||
T Consensus 240 ~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~---~~~~l~~~~~ihlNDtHpalai~ 316 (797)
T cd04300 240 IRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTHG---PLSEFPDKVAIQLNDTHPALAIP 316 (797)
T ss_pred hhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhCC---ChhhCCCceEEEecCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999984 78999999999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCchhhH
Q 002111 410 ELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLE 489 (965)
Q Consensus 410 ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~~~~ 489 (965)
||||+|||++|++|++||+||++||+||||||||||||+||++||+++||||++||++||++|+..+..++|. +.
T Consensus 317 ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~-----~~ 391 (797)
T cd04300 317 ELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPG-----DE 391 (797)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCC-----CH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeeeeee
Q 002111 490 KRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMAN 569 (965)
Q Consensus 490 ~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~MA~ 569 (965)
+++.+|+||+ + +++++||||+
T Consensus 392 ~~~~~l~ii~---------------------------------------------~--------------~~~~~v~Ma~ 412 (797)
T cd04300 392 DRIRRMSIIE---------------------------------------------E--------------GGEKQVRMAH 412 (797)
T ss_pred HHHHhhcccc---------------------------------------------c--------------CCCCEEehHH
Confidence 9999999988 4 3345899999
Q ss_pred eecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhh
Q 002111 570 LCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELR 649 (965)
Q Consensus 570 Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~~l~ 649 (965)
||+++||+|||||+|||+|+|+++|+||+++||+||+|||||||||||+.+|||+|++||+++||+ +|++|+++|++|.
T Consensus 413 LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~ 491 (797)
T cd04300 413 LAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGD-DWVTDLDQLKKLE 491 (797)
T ss_pred HHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999997 8999999999999
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccc
Q 002111 650 KFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKF 729 (965)
Q Consensus 650 ~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~ 729 (965)
++++|++|+++|+++|++||.+|++||++++|+.+||++|||||||||||||||+||+|+|++||.+||+ +|... +
T Consensus 492 ~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~---~ 567 (797)
T cd04300 492 PFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKE-NPNAD---I 567 (797)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHh-CCCcC---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 77644 7
Q ss_pred cCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCcc
Q 002111 730 VPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSN 809 (965)
Q Consensus 730 ~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSn 809 (965)
+||||||||||||+|.+||+|||+|++||++||+||+++++|||||||||+||+||+||||||||+||||||+|||||||
T Consensus 568 ~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsn 647 (797)
T cd04300 568 VPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGN 647 (797)
T ss_pred CCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCch
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCC--CCCCChhHHHHHHHHhcCCCCccc---H
Q 002111 810 MKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG--KFVPDARFEEVKKFVKSGVFGSYN---Y 884 (965)
Q Consensus 810 MKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~--~~~~~~~l~~v~d~i~~g~f~~~~---f 884 (965)
|||||||||||||||||||||+|+||+||+|+||++++||.++|+.+.+. .|+.+|.+++|+|+|.+|.|++.+ |
T Consensus 648 MK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f 727 (797)
T cd04300 648 MKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANGYYPADYYEADPELRRVLDQIASGFFSPGDPGEF 727 (797)
T ss_pred hhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHHHHcCCChHhhccCCHHHHHHHHHHhcCCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999988332 388999999999999999997553 9
Q ss_pred HHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcc
Q 002111 885 DELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 959 (965)
Q Consensus 885 ~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i 959 (965)
++||++|..+ +|+|||++||+||++||++|+++|+|+++|++|||+|||+||+|||||||+|||++||++
T Consensus 728 ~~i~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 797 (797)
T cd04300 728 RPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797 (797)
T ss_pred HHHHHHHccC-----CCeeEeeccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHccCCcCCcccHHHHHHHhhCc
Confidence 9999999976 899999999999999999999999999999999999999999999999999999999985
No 5
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=1.9e-263 Score=2283.77 Aligned_cols=801 Identities=45% Similarity=0.791 Sum_probs=777.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHH
Q 002111 83 NSSGPDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLN 162 (965)
Q Consensus 83 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~n 162 (965)
.+-..++++|+++|.+||++++|+++++|++.++|+|||.+|||+|+++|.+|+++|.+.+.|+||||||||||||+|.|
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~n 87 (815)
T PRK14986 8 ASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSN 87 (815)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcEEEEEchhhhccHHHHH
Confidence 33346788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceee
Q 002111 163 AIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEE 242 (965)
Q Consensus 163 nL~NLgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E 242 (965)
||+||||++++++||++||+||++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|
T Consensus 88 nl~nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E 167 (815)
T PRK14986 88 ALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKE 167 (815)
T ss_pred HHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCCcccccCCceEEEEeCCEeeeCCCCC-eeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccc
Q 002111 243 VAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK-SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDL 321 (965)
Q Consensus 243 ~pd~Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~-~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl 321 (965)
.||+|+..|+|||++|++.+++|+|+|+++.. |. .+|+++++|+|||||+|||||+|+++|+||||+++ +.++||+
T Consensus 168 ~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~-~~~~fd~ 244 (815)
T PRK14986 168 SPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQ-ASSEINL 244 (815)
T ss_pred cCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEee-cCcccCH
Confidence 99999999999999999999999999999753 53 34999999999999999999999999999999999 6779999
Q ss_pred cccCCCchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCC
Q 002111 322 SAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMND 401 (965)
Q Consensus 322 ~~fn~gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlND 401 (965)
..||.|+|..++++++.+|+||++|||+|++++||+|||||||||||||+|||||||++.+ +.|+.||++++|||||
T Consensus 245 ~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~---~~l~~l~~~v~ihlND 321 (815)
T PRK14986 245 GKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH---KTYDNLADKIAIHLND 321 (815)
T ss_pred hhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCHhhCCcccEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999997 5899999999999999
Q ss_pred CChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhC
Q 002111 402 THPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYG 481 (965)
Q Consensus 402 tHpalai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~ 481 (965)
|||||+||||||+|||++|++|++||+||+++|+||||||||||||+||++||+++||||++||++||++|+..+...||
T Consensus 322 tHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~ 401 (815)
T PRK14986 322 THPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYP 401 (815)
T ss_pred CcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCC
Q 002111 482 TADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEP 561 (965)
Q Consensus 482 ~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 561 (965)
+ +.+++.+|+||+ + ++
T Consensus 402 ~-----~~~~~~~~sii~---------------------------------------------~--------------~~ 417 (815)
T PRK14986 402 N-----DTDLLGRASIID---------------------------------------------E--------------SN 417 (815)
T ss_pred C-----cHHHHhhhhccc---------------------------------------------c--------------CC
Confidence 9 999999999998 3 22
Q ss_pred CCeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccC
Q 002111 562 PQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTN 641 (965)
Q Consensus 562 ~~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d 641 (965)
+++||||+||+++||+|||||+||++|+++.||+||+.+||+||.|||||||||||+.+|||+|++||+++||+ +|.+|
T Consensus 418 ~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~-~W~~d 496 (815)
T PRK14986 418 GRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGR-TWRTD 496 (815)
T ss_pred CCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCChhhHhhhcCHHHHHHHHHhcCc-hhhhC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999997 89999
Q ss_pred cchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcC
Q 002111 642 TGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMS 721 (965)
Q Consensus 642 ~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~ 721 (965)
++.|++|+++.+|++|+++|+++|++||.+|++||++++|+.+||++|||+|||||||||||+||||+|++||.+|++ +
T Consensus 497 ~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~-~ 575 (815)
T PRK14986 497 LSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKA-D 575 (815)
T ss_pred hHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHh-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 7
Q ss_pred hhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCc
Q 002111 722 AVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG 801 (965)
Q Consensus 722 ~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag 801 (965)
|... ++||||||||||||+|.+||+|||+|++||++||+||+++++|||||||||+||+||+||||||||+||||||
T Consensus 576 p~~~---~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag 652 (815)
T PRK14986 576 PDAK---WVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAG 652 (815)
T ss_pred CCcC---CCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCC
Confidence 6644 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCC
Q 002111 802 MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGV 878 (965)
Q Consensus 802 ~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~ 878 (965)
+||||||||||||||||||||||||||||+++||++|+|+||++++||.++|.++ |++ |+.+|+|++|+|+|.+|.
T Consensus 653 ~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~ 731 (815)
T PRK14986 653 TEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQG-YKPREYYEKDEELHQVLTQIGSGV 731 (815)
T ss_pred ccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999887 664 789999999999999999
Q ss_pred CCccc---HHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHH
Q 002111 879 FGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 955 (965)
Q Consensus 879 f~~~~---f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~ 955 (965)
|++.+ |++||++|..+ +|+|||++||+||++||++|+++|+|+++|++|||+|||+||+|||||||+|||++
T Consensus 732 f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~~Ya~~ 806 (815)
T PRK14986 732 FSPEEPGRYRDLVDSLINF-----GDHYQVLADYRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADE 806 (815)
T ss_pred CCCCCchhHHHHHHHhccC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHH
Confidence 98764 99999999876 89999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCC
Q 002111 956 IWNIIPVEL 964 (965)
Q Consensus 956 IW~i~p~~~ 964 (965)
||+++|+++
T Consensus 807 IW~~~p~~~ 815 (815)
T PRK14986 807 IWHIDPVRL 815 (815)
T ss_pred hhCCCccCC
Confidence 999999874
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=6.8e-244 Score=2096.31 Aligned_cols=706 Identities=52% Similarity=0.900 Sum_probs=639.8
Q ss_pred HHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeeccccccCCCCcc
Q 002111 176 ALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWE 255 (965)
Q Consensus 176 aL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~Wl~~gnPwe 255 (965)
||++||+++++|+++|+||||||||||||||||||||||||+|++||||||+||+|||+|.||+|+|.||+||..|||||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEeCCEeeeCCCCCe-eeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCCCchhhHHH
Q 002111 256 IERNDVSYPVKFYGKIVPGSDGKS-HWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAE 334 (965)
Q Consensus 256 i~r~d~~~~V~f~G~v~~~~dG~~-~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~~ 334 (965)
++|++.+|+|+|+|+|+ ..+|+. +|+++++|+|||||+|||||+|++||+||||+|+ ++++|||..||.|||.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEE-ecCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 99999999999999998 344554 5999999999999999999999999999999999 88899999999999999999
Q ss_pred hhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHH
Q 002111 335 ALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRI 414 (965)
Q Consensus 335 ~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpalai~ELmRi 414 (965)
++..+|+||+||||+|++++||+|||||||||||||||||||||++.+ .+|++||++++|||||||||||||||||+
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~---~~~~~~~~~~~ihlNdtHpa~ai~ElmR~ 235 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH---GDLREFPDKVVIHLNDTHPAFAIPELMRI 235 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCGGGHHHHEEEEEESSTTTTHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC---CChHHCCcceEEeecCCccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 59999999999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhh
Q 002111 415 LIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKE 494 (965)
Q Consensus 415 L~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~~~~~~l~~ 494 (965)
|||++||+|++||+||++||+||||||||||||+||++||+++||||+|||++||++|+..+...+|. +.+++.+
T Consensus 236 L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~-----d~~~~~~ 310 (713)
T PF00343_consen 236 LMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPG-----DEDQIRR 310 (713)
T ss_dssp HHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT------HHHHHH
T ss_pred HHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcC-----cchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred hcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeeeeeeeeccc
Q 002111 495 TRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVG 574 (965)
Q Consensus 495 m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~MA~Lal~~ 574 (965)
|+|++ + +.++.||||+||+++
T Consensus 311 l~ii~---------------------------------------------~--------------~~~~~~~Ma~LAl~~ 331 (713)
T PF00343_consen 311 LSIIE---------------------------------------------E--------------GNSKRFRMANLALRG 331 (713)
T ss_dssp HSSEE---------------------------------------------T--------------SSSCEEEHHHHHHHC
T ss_pred ccccc---------------------------------------------c--------------cchhhcchhHHHHHh
Confidence 99988 4 556799999999999
Q ss_pred CCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCC
Q 002111 575 SHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADN 654 (965)
Q Consensus 575 S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~~l~~~~dd 654 (965)
||+|||||+|||+|+|+++|++|+++||+||+|||||||+|||+..|||+|++||+++||+ +|++|++.|++|.++++|
T Consensus 332 S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~-~W~~d~~~l~~l~~~~dd 410 (713)
T PF00343_consen 332 SHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGD-DWRTDLEQLEKLEKFADD 410 (713)
T ss_dssp ESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTS-GGGCSGGGGGGGGGGCCS
T ss_pred cccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhcc-ccccCHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999995 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEE
Q 002111 655 EDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVC 734 (965)
Q Consensus 655 ~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~ 734 (965)
+.|+++|+++|+++|.+|+++|++++|+.+||++|||+|||||||||||+||+|+|++||.+||+ +|+.. .+||||
T Consensus 411 ~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~-~p~~~---~~Pv~~ 486 (713)
T PF00343_consen 411 EEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKN-NPNKK---IRPVQF 486 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHH-STTSC---CS-EEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHh-cccCC---CCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998 66643 789999
Q ss_pred EEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc
Q 002111 735 IFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM 814 (965)
Q Consensus 735 IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfam 814 (965)
||||||||+|.+||+|||+|++||++||+||+++++|||||||||||++||+||||||||+||||||+||||||||||||
T Consensus 487 IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~ 566 (713)
T PF00343_consen 487 IFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAM 566 (713)
T ss_dssp EEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHH
T ss_pred EEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCc---ccHHHHH
Q 002111 815 NGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGS---YNYDELM 888 (965)
Q Consensus 815 NGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f~~---~~f~~l~ 888 (965)
||+|||||||||||||+++||+||+|+||++++||.+++.++ |++ |..+|+|++|+|+|.+|.|++ .+|++||
T Consensus 567 NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~vld~i~~g~f~~~~~~~f~~i~ 645 (713)
T PF00343_consen 567 NGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRVLDQIISGFFSPGDPDEFKPIY 645 (713)
T ss_dssp TT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHHHHHHHHTTTTTTSTTTTHHHH
T ss_pred CCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHHHHHHhcCCCCCCCchhHHHHH
Confidence 999999999999999999999999999999999999999886 653 678999999999999999987 3599999
Q ss_pred HhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcccc
Q 002111 889 GSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 961 (965)
Q Consensus 889 ~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~p 961 (965)
++|..+ +|+|||++||+||++||++|+++|+|+++|++|||+|||+||+|||||||+|||++||+|+|
T Consensus 646 ~~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~g~FssDrtI~~Ya~~IW~~~p 713 (713)
T PF00343_consen 646 DSLLMY-----NDEYLVLADFESYVEAQEKVDKAYRDPKKWNKMSILNIARSGKFSSDRTIREYAEDIWNVKP 713 (713)
T ss_dssp HHCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHHHHHHHHHHTTTS--
T ss_pred hCcCCC-----CCcchhhhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHhhCCCC
Confidence 996655 89999999999999999999999999999999999999999999999999999999999988
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-213 Score=1844.33 Aligned_cols=737 Identities=45% Similarity=0.747 Sum_probs=701.5
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhhc
Q 002111 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNL 167 (965)
Q Consensus 88 ~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~NL 167 (965)
+.++|+.+|..++.+..++++..+++.+||.|++..||+++...|.+|++.+.+.+.|+|||+|||||+||+|.|||.||
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~yy~s~efL~grl~~~~l~n~ 84 (750)
T COG0058 5 RLEQLAYNLWWSLDTTAGKLFRDADPEDWYEALHNPVRELLAADWLRLNQLARDEDFKQVYYLSMEFLIGRLLGNNLWNL 84 (750)
T ss_pred cHHHHHHHHHHHHHHHhccChhhCCHHHHHHHhhHHHHHHHhcCHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcchhhh
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeecccc
Q 002111 168 GLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDW 247 (965)
Q Consensus 168 gl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~W 247 (965)
|+++.++++|+++|++++++...|+||+|| ||||||||||||||||||+|++||||||+||||+|++.||||+|.|+.|
T Consensus 85 g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w 163 (750)
T COG0058 85 GIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEW 163 (750)
T ss_pred cchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhh
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCCC
Q 002111 248 LELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327 (965)
Q Consensus 248 l~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~g 327 (965)
+..|||||+.|+. + |+|||+||+||++ ++|+||||+++++..+|+|..||.|
T Consensus 164 ~~~~~pwe~~r~~------------------------~---a~~~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~ 215 (750)
T COG0058 164 LKYGNPWEFLRDA------------------------E---GVPYDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG 215 (750)
T ss_pred hccCCcceeeccc------------------------C---CceeeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc
Confidence 9999999988741 1 5899999999999 9999999999988779999999998
Q ss_pred chhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhh
Q 002111 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLC 407 (965)
Q Consensus 328 dy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpala 407 (965)
++...+|+||++|||+|+ ++|||+|||||||||+|||++++..+++ +++.+++ |||||||+||
T Consensus 216 ------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~---~~~~~~~----~lNdtHpa~~ 278 (750)
T COG0058 216 ------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH---DLDVLAD----HLNDTHPALA 278 (750)
T ss_pred ------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc---cccchhh----hhcCCChhHh
Confidence 346788999999999998 8999999999999999999999655542 6777665 4999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCchh
Q 002111 408 IPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDL 487 (965)
Q Consensus 408 i~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~~ 487 (965)
+|||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||.+|+..++..+|+
T Consensus 279 i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~~~~~~----- 353 (750)
T COG0058 279 IPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVRLLYLG----- 353 (750)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHHhhccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeeee
Q 002111 488 LEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRM 567 (965)
Q Consensus 488 ~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~M 567 (965)
+ ++.++++|+ + |||
T Consensus 354 ~--~~~~~~~i~---------------------------------------------~-------------------v~M 367 (750)
T COG0058 354 D--LIRRGSPIE---------------------------------------------E-------------------VNM 367 (750)
T ss_pred c--ccccCCccc---------------------------------------------c-------------------eeh
Confidence 4 777777766 2 999
Q ss_pred eeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHH
Q 002111 568 ANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAE 647 (965)
Q Consensus 568 A~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~~ 647 (965)
|+||+++||+|||||+||+||+|++.|++|+++||+||+|||||||+|||+..|||+|++++++.||+ .|..+++.+.+
T Consensus 368 a~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~-~W~~~~~~l~~ 446 (750)
T COG0058 368 AVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDEKIGD-EWLNDLDILDE 446 (750)
T ss_pred hhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhhhhhh-hhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhc
Q 002111 648 LRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKA 727 (965)
Q Consensus 648 l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~ 727 (965)
+..+++|+.+++.|+.+|++||++|++++++++|+.+||++|||+|||||||||||+||+++++.+|..|++ +
T Consensus 447 l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d------ 519 (750)
T COG0058 447 LLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-D------ 519 (750)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-C------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 2
Q ss_pred cccCeEE-EEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCC
Q 002111 728 KFVPRVC-IFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASG 806 (965)
Q Consensus 728 ~~~Pr~~-IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASG 806 (965)
.+||++ ||||||||+|+.||+|||+|+++|++||+ ++|||||||||||+||+||||||||+||||||+||||
T Consensus 520 -~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASG 592 (750)
T COG0058 520 -WVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASG 592 (750)
T ss_pred -CCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEeCCCChhHHHhhcccccccccCCCCCccccC
Confidence 345555 99999999999999999999999999997 8899999999999999999999999999999999999
Q ss_pred CccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCccc
Q 002111 807 TSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN 883 (965)
Q Consensus 807 TSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f~~~~ 883 (965)
||||||||||+|||||||||||||+|+||++|+|+||.+++|+..++.++.+.. +..+++++.+++.+++|.|.|.+
T Consensus 593 TsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p~~ 672 (750)
T COG0058 593 TSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYELENEVKPVLDEIIDGRFSPGW 672 (750)
T ss_pred cCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCccc
Confidence 999999999999999999999999999999999999999999999998874432 55789999999999999998764
Q ss_pred ---HHHHHHhhcc-CCCCCCC-cccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhc
Q 002111 884 ---YDELMGSLEG-NEGFGQA-DYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWN 958 (965)
Q Consensus 884 ---f~~l~~~L~~-~~~~~~~-D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~ 958 (965)
|+++|++|.. . + |+||+++||.+|++||+++++.|+++++|++++|.|||+||+|||||||++||.+||+
T Consensus 673 ~~~~~~~~~sl~~~~-----~~dr~~~~yd~~~Y~~aq~~~~~~~~~~~~W~~~~i~nia~~g~fssDrtI~~Y~~~Iw~ 747 (750)
T COG0058 673 KSRFKNLIDSLLPKF-----GTDRMMVLYDFKAYVPAQEEVDALYRDQEAWTKKAILNIANSGLFSSDRTIREYAGEIWH 747 (750)
T ss_pred HHHHHHHHHHhhhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHcCCCCchhHHHHHHHHhhc
Confidence 9999999984 2 4 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 002111 959 IIP 961 (965)
Q Consensus 959 i~p 961 (965)
++|
T Consensus 748 ~~~ 750 (750)
T COG0058 748 IGP 750 (750)
T ss_pred cCC
Confidence 976
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=3.7e-136 Score=1213.92 Aligned_cols=600 Identities=25% Similarity=0.391 Sum_probs=511.6
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhhcCchHHHHHHHHHcCCChHHHhccCCCC
Q 002111 116 AFFATAQSVRDSLII-NWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDA 194 (965)
Q Consensus 116 ~y~Ala~~vRD~l~~-~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~NLgl~~~~~eaL~~lG~~le~l~~~E~Da 194 (965)
.|.++....++++.. .|..+.. ....+.++||||||.+..+|.
T Consensus 59 ~~~~~~~~~~~y~~~~~~~~~~~---~~~~~~~aYFs~E~gl~~~lp--------------------------------- 102 (778)
T cd04299 59 RYDRVLEDFDAYLEEPTWYQGRN---DGEPLVAAYFSMEFGLHESLP--------------------------------- 102 (778)
T ss_pred HHHHHHHHHHHHhccCccccccc---cCCCCeeEEeccccccCCCCC---------------------------------
Confidence 344444455555432 3443211 113455669999998887774
Q ss_pred CCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEe-CCceeeeccccccCCCCcccccCCceEEEEeCCEeee
Q 002111 195 ALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRIT-KDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP 273 (965)
Q Consensus 195 ~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~-dG~Q~E~pd~Wl~~gnPwei~r~d~~~~V~f~G~v~~ 273 (965)
+||||||||||||||||||||+|++||||+|+||||+|.|+ +|||+|.++.|...+.||+.. .
T Consensus 103 -iYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~---------------~ 166 (778)
T cd04299 103 -IYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV---------------R 166 (778)
T ss_pred -ccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE---------------e
Confidence 89999999999999999999999999999999999999999 999999999999999999752 2
Q ss_pred CCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCCCchhhHHHhhhhcccccceecCCCCcc
Q 002111 274 GSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESV 353 (965)
Q Consensus 274 ~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~~~~~~ae~It~vLYp~D~~~ 353 (965)
+.+|+. .+ ..+|+||+ ++++|+|.++++ .++++.|+++.+.|. ..+|.||++|||+|
T Consensus 167 ~~~G~~------~~----v~v~l~g~----~v~~rvw~~~vg--~v~lylLDtd~~~n~----~~~R~iT~~LYg~D--- 223 (778)
T cd04299 167 DADGEP------VR----VSVELPGR----TVYARVWKAQVG--RVPLYLLDTDIPENS----PDDRGITDRLYGGD--- 223 (778)
T ss_pred cCCCCe------EE----EEEeeCCC----ceEEEEEEEEcC--CCCEEEecCCccccc----hhhcccccCCCCCc---
Confidence 345542 22 34888997 679999999976 488999999998764 56799999999998
Q ss_pred ccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccc
Q 002111 354 EGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRT 433 (965)
Q Consensus 354 eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpalai~ELmRiL~D~~gl~w~eAw~it~~t 433 (965)
+++|||||||||+|++|.+ +++ | + ++.+|||||+||||+++||||+||+++|++|++||++|+.+
T Consensus 224 --~~~Rl~Qe~~Lg~agl~~L-r~l----g----~----~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~ 288 (778)
T cd04299 224 --QETRIQQEILLGIGGVRAL-RAL----G----I----KPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRAS 288 (778)
T ss_pred --HHHHHHHHHHHHHHHHHHH-HHh----C----C----CCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCe
Confidence 5789999999999999865 432 2 2 36799999999999999999999999899999999999999
Q ss_pred eeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhcccccCCCchhhhhhhcc
Q 002111 434 VAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVK 513 (965)
Q Consensus 434 ~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~ 513 (965)
++||||||+|+|||+||.++|+++||+|++ . ++++.+.+..+++..
T Consensus 289 tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~---------------~-----lgl~~~~~~~lg~e~-------------- 334 (778)
T cd04299 289 TVFTTHTPVPAGHDRFPPDLVERYFGPYAR---------------E-----LGLSRDRFLALGREN-------------- 334 (778)
T ss_pred EEEecCCchHHHhhhCCHHHHHHHhhHHHH---------------H-----cCCCHHHHhhhcccc--------------
Confidence 999999999999999999999999999864 1 335788888888743
Q ss_pred cccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeeeeeeeecccCCchhhHHHHHHHHHHHhH
Q 002111 514 TKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEV 593 (965)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~MA~Lal~~S~~VNGVS~lHsei~k~~v 593 (965)
. .++++.|||++||+++|++|||||+||++|+|+ |
T Consensus 335 -------------------------------~-------------~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-m 369 (778)
T cd04299 335 -------------------------------P-------------GDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-M 369 (778)
T ss_pred -------------------------------c-------------cCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-H
Confidence 1 022358999999999999999999999999997 7
Q ss_pred hhhhhhhcCCC---cccccccccccccccccChhHHHHHHhhcCCCccccCcchHH--HhhhcCCCHHHHHHHHHHHHHH
Q 002111 594 FNEFYKLWPEK---FQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLA--ELRKFADNEDLQSQFRAAKRNN 668 (965)
Q Consensus 594 f~df~~l~P~k---f~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~--~l~~~~dd~~~~~~w~~~K~~n 668 (965)
|++|+..||.+ |.+||||||++||+ ||++.++|++++|+ +|..+++... ++...++|+++ | ++|+++
T Consensus 370 f~~~~~g~p~~~~~i~~ITNGVh~~~W~---~P~~~~l~~~~~g~-~w~~~~~~~~~~~~~~~i~d~~l---w-~~K~~~ 441 (778)
T cd04299 370 FAGLWPGFPVEEVPIGHVTNGVHVPTWV---APEMRELYDRYLGG-DWRERPTDPELWEAVDDIPDEEL---W-EVRQQL 441 (778)
T ss_pred hhhhhccCCcccCceeceeCCcchhhhc---CHHHHHHHHHhcCc-chhhccchHHHHhhhcCCCcHHH---H-HHHHHH
Confidence 99999999875 99999999999999 79999999999997 8999887543 33344678776 7 699999
Q ss_pred HHHHHHHHHHHh-----------------CCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccC
Q 002111 669 KMKVVSFIKEKT-----------------GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVP 731 (965)
Q Consensus 669 K~~L~~~I~~~~-----------------g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~P 731 (965)
|.+|+++|++++ |..+||++|||+||||||+||||+| ||++++||.+|+. +| + .|
T Consensus 442 K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~-~~-~-----~p 513 (778)
T cd04299 442 RRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN-DP-E-----RP 513 (778)
T ss_pred HHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh-CC-C-----CC
Confidence 999999999887 5669999999999999999999999 9999999999985 32 2 39
Q ss_pred eEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccch
Q 002111 732 RVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMK 811 (965)
Q Consensus 732 r~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMK 811 (965)
+||||||||||+|.+||+|||+|+++++ ||++.+ ||||+|||||++|++|+||||||+|+|++|+|||||||||
T Consensus 514 vQ~IfaGKAhP~d~~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMK 587 (778)
T cd04299 514 VQFIFAGKAHPADEPGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMK 587 (778)
T ss_pred eEEEEEEecCccchHHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHH
Confidence 9999999999999999999999999996 999999 9999999999999999999999999999999999999999
Q ss_pred hhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHhh
Q 002111 812 FAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSL 891 (965)
Q Consensus 812 famNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~~g~f~~~~f~~l~~~L 891 (965)
|||||+||+|||||||.|.. .+.|+|.||..... .++. .++ ..|...||+.|
T Consensus 588 A~~NG~LnlSvlDGww~E~~---~g~nGwaig~~~~~--------------~~~~--------~~d---~~da~~Ly~~L 639 (778)
T cd04299 588 AALNGGLNLSVLDGWWDEGY---DGENGWAIGDGDEY--------------EDDE--------YQD---AEEAEALYDLL 639 (778)
T ss_pred HHHcCCeeeecccCcccccc---CCCCceEeCCCccc--------------cChh--------hcc---hhhHHHHHHHH
Confidence 99999999999999999976 45999999974321 1111 111 23689999999
Q ss_pred ccCCCCCCCcccccccchhHHHHHHHHHHHHhcC-----HhHHHHHHHHhhhc-CCCCChHHHHHHHHHHHh
Q 002111 892 EGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCD-----QKRWTRMSIMNTAG-SSKFSSDRTIQEYARDIW 957 (965)
Q Consensus 892 ~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d-----~~~W~~~~i~niA~-sg~FSSDRtI~eYa~~IW 957 (965)
+. +.++.+|.. +.+|.+||..+|+. ...||++||++||+++.|
T Consensus 640 e~-----------------------~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 640 EN-----------------------EVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred HH-----------------------HHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 84 355677774 78999999999996 699999999999999998
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=2.2e-132 Score=1161.26 Aligned_cols=571 Identities=25% Similarity=0.401 Sum_probs=500.1
Q ss_pred EEEEehhhhhhhhhHHHHhhcCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecc
Q 002111 147 AYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRY 226 (965)
Q Consensus 147 vyYlSmEFL~GR~L~nnL~NLgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrY 226 (965)
|+||||||.+..+|. +||||||||||||||||||||+|++||||||
T Consensus 1 ~ayf~~E~g~~~~~p----------------------------------~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y 46 (601)
T TIGR02094 1 VAYFSMEYGLHESLP----------------------------------IYSGGLGVLAGDHLKSASDLGLPLVAVGLLY 46 (601)
T ss_pred CeEEeeccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 689999997777664 9999999999999999999999999999999
Q ss_pred CCcceeEEEe-CCceeeeccccccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeE
Q 002111 227 KYGLFKQRIT-KDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTI 305 (965)
Q Consensus 227 kyG~FkQ~I~-dG~Q~E~pd~Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~ 305 (965)
+||||+|+|+ +|||+|.+++|+..+.||+.. .+.+|+ | ++|++||||. ++
T Consensus 47 ~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~---------------~~~~g~--~--------~~~~v~i~g~----~~ 97 (601)
T TIGR02094 47 KQGYFRQRLDEDGWQQEAYPNNDFESLPIEKV---------------LDTDGK--W--------LKISVRIRGR----DV 97 (601)
T ss_pred CCCceeEEECCCCceeecCCccccCCCceEEE---------------ecCCCC--e--------EEEEEecCCc----EE
Confidence 9999999998 999999999999999999852 234454 2 4799999994 89
Q ss_pred EEEEEEeecCCCcccccccCCCchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcc
Q 002111 306 NLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN 385 (965)
Q Consensus 306 ~LRLW~a~v~~~~fdl~~fn~gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~ 385 (965)
++|+|+++++ .++++.|++++..| ...+|.||++|||+| +++|++||||||+|++|+|- ..|
T Consensus 98 ~~rlw~~~~~--~v~lylld~~~~~n----~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l~-----~l~-- 159 (601)
T TIGR02094 98 YAKVWRVQVG--RVPLYLLDTNIPEN----SEDDRWITGRLYGGD-----KEMRIAQEIVLGIGGVRALR-----ALG-- 159 (601)
T ss_pred EEEEEEEEeC--CCCEEEecCCCccc----chhhcCccCCCCCCC-----HHHHHHHHHHHHHHHHHHHH-----HcC--
Confidence 9999999974 58899999998544 467899999999998 58899999999999999762 121
Q ss_pred cccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHH
Q 002111 386 VNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEII 465 (965)
Q Consensus 386 ~~l~~lp~kvaihlNDtHpalai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II 465 (965)
+ ++.+|||||+||||+++||||+|+ ++|++|++||++|+.+++||||||+|+|+|+||.++|+++||| ++++
T Consensus 160 --~----~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~-~~~~ 231 (601)
T TIGR02094 160 --I----DPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD-YAAN 231 (601)
T ss_pred --C----CceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh-hhhH
Confidence 1 678999999999999999999999 7899999999999999999999999999999999999999999 4666
Q ss_pred HHHhHHHHHHHHHhhCCCCchhhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhc
Q 002111 466 EMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQE 545 (965)
Q Consensus 466 ~~In~~f~~~v~~~~~~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 545 (965)
..|+.+++..+..++++
T Consensus 232 ~gl~~~~~~~~~~~~~~--------------------------------------------------------------- 248 (601)
T TIGR02094 232 LGLPREQLLALGRENPD--------------------------------------------------------------- 248 (601)
T ss_pred hCCCHHHHHhhhhhccC---------------------------------------------------------------
Confidence 67777666544322221
Q ss_pred cchhhHhHhhhhcCCCCCeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCC---cccccccccccccccccC
Q 002111 546 DGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEK---FQNKTNGVTPRRWIRFCN 622 (965)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~k---f~n~TNGVt~rrWl~~~N 622 (965)
..++|||++||+++|++|||||++|+++++ .||++|+++||.+ |.+||||||+++|. |
T Consensus 249 ---------------~~~~vnm~~lai~~S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~gItNGId~~~W~---~ 309 (601)
T TIGR02094 249 ---------------DPEPFNMTVLALRLSRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIGYVTNGVHNPTWV---A 309 (601)
T ss_pred ---------------ccCceeHHHHHHHhCCeeeeecHHHHHHHH-HHHHhhhhhcccccCCccceeCCccccccC---C
Confidence 125799999999999999999999999998 6899999999987 99999999999998 7
Q ss_pred hhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------------CC
Q 002111 623 PDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYS-----------------VS 685 (965)
Q Consensus 623 p~Ls~Lit~~iG~~~W~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~-----------------ld 685 (965)
|.++.|+++++|+ +|.+++++++.|.++ |....+++.++|++||.+|+++|++++|+. +|
T Consensus 310 ~~~~~l~~~y~~~-~w~~~~~~~~~~~~~--~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~d 386 (601)
T TIGR02094 310 PELRDLYERYLGE-NWRELLADEELWEAI--DDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLD 386 (601)
T ss_pred HHHHHHHHHhCCc-chhccchhhhhhhhc--ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccC
Confidence 9999999999997 799999999999886 333345555799999999999999999877 99
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
|+++||+||||||+||||+| ||++++||.+|++ +|. .|+||||+|||||+|.+||+||++|+++++ ||
T Consensus 387 pd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~~~------~pvq~V~~Gka~p~d~~gk~~i~~i~~la~----~~ 454 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADL-IFRDLERLARILN-NPE------RPVQIVFAGKAHPADGEGKEIIQRIVEFSK----RP 454 (601)
T ss_pred CCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-CCC------CCeEEEEEEecCcccchHHHHHHHHHHHHh----cc
Confidence 99999999999999999999 9999999999986 433 399999999999999999999999999996 89
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeeccc
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAR 845 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~ 845 (965)
++.+ ||+|++||||++|++|+||||||+|||++|+||||||+|||||||+|++||+||||+|.. ++.|+|.||..
T Consensus 455 ~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~---~~~nGf~f~~~ 529 (601)
T TIGR02094 455 EFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY---DGDNGWAIGDG 529 (601)
T ss_pred cCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC---CCCcEEEECCC
Confidence 9999 999999999999999999999999999999999999999999999999999999999976 34799999974
Q ss_pred hhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHH-HHHhc
Q 002111 846 AHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV-DEAYC 924 (965)
Q Consensus 846 ~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v-~~~Y~ 924 (965)
.... ++ ...+..+..+||+.|+. .| +.+|.
T Consensus 530 ~~~~--------------~~-----------~~~d~~da~~l~~~L~~------------------------ai~~~yy~ 560 (601)
T TIGR02094 530 EEYD--------------DE-----------EEQDRLDAEALYDLLEN------------------------EVIPLYYD 560 (601)
T ss_pred cccc--------------cc-----------ccccCCCHHHHHHHHHH------------------------HHHHHHhc
Confidence 3211 10 01123478999999983 55 66666
Q ss_pred C-----HhHHHHHHHHhhhcC-CCCChHHHHHHHHHHHh
Q 002111 925 D-----QKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIW 957 (965)
Q Consensus 925 d-----~~~W~~~~i~niA~s-g~FSSDRtI~eYa~~IW 957 (965)
+ +.+|.+|+..+|+.. ..||++||++||++..|
T Consensus 561 ~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 561 RDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred CCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 5 566999999999964 79999999999999876
No 10
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.81 E-value=4.4e-18 Score=192.44 Aligned_cols=267 Identities=21% Similarity=0.285 Sum_probs=190.0
Q ss_pred CeeeeeeeecccCCchhhHHHHHHHHHHHhH----hhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 002111 563 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEV----FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 638 (965)
Q Consensus 563 ~~v~MA~Lal~~S~~VNGVS~lHsei~k~~v----f~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W 638 (965)
..++|...++..|..|+.||.-+.+.+.+.. +..+....+.|+.-|+|||....|-....+.+...++
T Consensus 199 ~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~-------- 270 (476)
T cd03791 199 GQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYS-------- 270 (476)
T ss_pred CcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCC--------
Confidence 5789999999999999999998888665321 1112222357899999999999996332222211110
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 002111 639 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 718 (965)
Q Consensus 639 ~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik 718 (965)
.. .| ..|..+|..| +++.|...+++....+++-|+.++|+..+ ++..+.+ ++
T Consensus 271 ---------------~~----~~-~~~~~~k~~l----~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~ 322 (476)
T cd03791 271 ---------------AD----DL-EGKAENKAAL----QEELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPE---LL 322 (476)
T ss_pred ---------------cc----cc-ccHHHHHHHH----HHHcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHH---HH
Confidence 00 13 3566666654 45788888899999999999999999988 7766654 33
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 002111 719 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 798 (965)
Q Consensus 719 ~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nis 798 (965)
+ .+.+|++.|+..+. +.+.+.++++.. .+ +|+|+..|+-.++..+..+||+....|
T Consensus 323 ~----------~~~~lvi~G~g~~~------~~~~~~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS 378 (476)
T cd03791 323 E----------LGGQLVILGSGDPE------YEEALRELAARY------PG--RVAVLIGYDEALAHLIYAGADFFLMPS 378 (476)
T ss_pred H----------cCcEEEEEecCCHH------HHHHHHHHHHhC------CC--cEEEEEeCCHHHHHHHHHhCCEEECCC
Confidence 2 13689999987542 223333333311 12 699999999999999999999999977
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccc----cceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHH
Q 002111 799 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE----ENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFV 874 (965)
Q Consensus 799 tag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~----eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i 874 (965)
. .|++|.+.|.+|++|++.|.|--|...|+..+..+ .|+|+|...
T Consensus 379 ~--~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~----------------------------- 427 (476)
T cd03791 379 R--FEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY----------------------------- 427 (476)
T ss_pred C--CCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC-----------------------------
Confidence 6 69999999999999999999999988887654421 166666431
Q ss_pred hcCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHH
Q 002111 875 KSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 954 (965)
Q Consensus 875 ~~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~ 954 (965)
+.++|.+.|. ++...|.+++.|.+|+...++. .||-++++++|.+
T Consensus 428 --------~~~~l~~~i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~ 472 (476)
T cd03791 428 --------NADALLAALR-------------------------RALALYRDPEAWRKLQRNAMAQ--DFSWDRSAKEYLE 472 (476)
T ss_pred --------CHHHHHHHHH-------------------------HHHHHHcCHHHHHHHHHHHhcc--CCChHHHHHHHHH
Confidence 2344444443 4555677899999998877654 5999999999976
Q ss_pred H
Q 002111 955 D 955 (965)
Q Consensus 955 ~ 955 (965)
-
T Consensus 473 ~ 473 (476)
T cd03791 473 L 473 (476)
T ss_pred H
Confidence 4
No 11
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.73 E-value=2.3e-16 Score=179.86 Aligned_cols=265 Identities=18% Similarity=0.283 Sum_probs=183.5
Q ss_pred eeeeeeeecccCCchhhHHHHHHHHHHHhHh----hhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccc
Q 002111 564 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 639 (965)
Q Consensus 564 ~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf----~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~ 639 (965)
.++|...++..|..|+.||.-+.+-+.+..+ ..+....+.|+.-|.|||...+|- |.-... +..
T Consensus 195 ~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~----p~~~~~----~~~---- 262 (473)
T TIGR02095 195 RVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWN----PATDPY----LKA---- 262 (473)
T ss_pred chHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccC----CCCCcc----ccc----
Confidence 6788888899999999999988775543211 111123467899999999999994 542111 111
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHh
Q 002111 640 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKE 719 (965)
Q Consensus 640 ~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~ 719 (965)
+|..+ .| +-|..+|.. ++++.|...+++....+++-|+.++|...+ ++..+.+ +++
T Consensus 263 ----------~~~~~-----~~-~~k~~~k~~----l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~ 318 (473)
T TIGR02095 263 ----------NYSAD-----DL-AGKAENKEA----LQEELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPE---LLE 318 (473)
T ss_pred ----------CcCcc-----ch-hhhhhhHHH----HHHHcCCCccCCCCEEEEEecCccccChHH-HHHHHHH---HHH
Confidence 01101 13 244555544 456788887789999999999999999988 7766655 332
Q ss_pred cChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCC
Q 002111 720 MSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 799 (965)
Q Consensus 720 ~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nist 799 (965)
.+.++++.|+..|.+. +.+.++ +. +.+ + +|+|+..|+.+.+..++.+||+....|.
T Consensus 319 ----------~~~~lvi~G~g~~~~~--~~l~~~----~~---~~~---~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~ 374 (473)
T TIGR02095 319 ----------LGGQLVVLGTGDPELE--EALREL----AE---RYP---G--NVRVIIGYDEALAHLIYAGADFILMPSR 374 (473)
T ss_pred ----------cCcEEEEECCCCHHHH--HHHHHH----HH---HCC---C--cEEEEEcCCHHHHHHHHHhCCEEEeCCC
Confidence 0368999998765332 233333 32 111 2 6999999999999999999999999887
Q ss_pred CccccCCCccchhhcccceEeeeccccccccccccc----ccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 002111 800 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG----EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 875 (965)
Q Consensus 800 ag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg----~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~ 875 (965)
.|.+|.+-|.+|..|++.|.|--|...|+.+... ..|+|+|..
T Consensus 375 --~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~------------------------------- 421 (473)
T TIGR02095 375 --FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE------------------------------- 421 (473)
T ss_pred --cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC-------------------------------
Confidence 6999999999999999999998888887665431 256666642
Q ss_pred cCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhc-CHhHHHHHHHHhhhcCCCCChHHHHHHHHH
Q 002111 876 SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC-DQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 954 (965)
Q Consensus 876 ~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~-d~~~W~~~~i~niA~sg~FSSDRtI~eYa~ 954 (965)
.+-++|.+.|. ++...|. |++.|.+|....+. -.||-+++.++|.+
T Consensus 422 ------~d~~~la~~i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 468 (473)
T TIGR02095 422 ------YDPGALLAALS-------------------------RALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVE 468 (473)
T ss_pred ------CCHHHHHHHHH-------------------------HHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHH
Confidence 12334444443 3333344 88899988877653 58999999999965
No 12
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.65 E-value=1.6e-14 Score=165.26 Aligned_cols=264 Identities=19% Similarity=0.276 Sum_probs=178.0
Q ss_pred eeeeeeeecccCCchhhHHHHHHHHHHHhHh----hhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccc
Q 002111 564 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 639 (965)
Q Consensus 564 ~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf----~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~ 639 (965)
.+++...++..|..|+.||.-+.+-+++..| ..+...-+.|+.-|.|||+...|- |.-...+.....
T Consensus 187 ~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~----p~~~~~~~~~~~----- 257 (466)
T PRK00654 187 QISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWN----PETDPLLAANYS----- 257 (466)
T ss_pred cccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccC----CccCcccccccC-----
Confidence 4677777899999999999988775554322 112334467899999999999995 432111111111
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHh
Q 002111 640 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKE 719 (965)
Q Consensus 640 ~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~ 719 (965)
. . .| +-|..+|..| +++.|.. +++....+++-|+.++|...+ ++..+.+ +++
T Consensus 258 -------------~-~----~~-~~k~~~k~~l----~~~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~---l~~ 309 (466)
T PRK00654 258 -------------A-D----DL-EGKAENKRAL----QERFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPE---LLE 309 (466)
T ss_pred -------------h-h----hh-hchHHHHHHH----HHHhCCC-CCCCcEEEEeeccccccChHH-HHHHHHH---HHh
Confidence 0 1 13 2455566554 4566765 457888999999999999998 7766554 332
Q ss_pred cChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCC
Q 002111 720 MSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 799 (965)
Q Consensus 720 ~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nist 799 (965)
. +.++++.|...+.+ ...+.++ ++.. ++ +|+|+..|+-+++..++.+||+...-|.
T Consensus 310 -~---------~~~lvivG~g~~~~--~~~l~~l----~~~~------~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~ 365 (466)
T PRK00654 310 -Q---------GGQLVLLGTGDPEL--EEAFRAL----AARY------PG--KVGVQIGYDEALAHRIYAGADMFLMPSR 365 (466)
T ss_pred -c---------CCEEEEEecCcHHH--HHHHHHH----HHHC------CC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC
Confidence 0 35788888754432 1223333 3211 12 6888888988889999999999999888
Q ss_pred CccccCCCccchhhcccceEeeecccccccccccc----cccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 002111 800 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV----GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 875 (965)
Q Consensus 800 ag~EASGTSnMKfamNGal~lgTlDGanvEI~e~v----g~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~ 875 (965)
.|.+|.+-|-+|..|++.|.|--|...|+.... +..|+|+|..
T Consensus 366 --~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~------------------------------- 412 (466)
T PRK00654 366 --FEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDD------------------------------- 412 (466)
T ss_pred --CCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCC-------------------------------
Confidence 799999999999999999999777777655332 1256666642
Q ss_pred cCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHH
Q 002111 876 SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 954 (965)
Q Consensus 876 ~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~ 954 (965)
.+-+.|.+.|. ++...|.+++.|.+|+...++ -.||.+++.++|.+
T Consensus 413 ------~d~~~la~~i~-------------------------~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 458 (466)
T PRK00654 413 ------FNAEDLLRALR-------------------------RALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLE 458 (466)
T ss_pred ------CCHHHHHHHHH-------------------------HHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 22344444443 344456778888888766554 58999999999965
No 13
>PRK14098 glycogen synthase; Provisional
Probab=99.64 E-value=3.3e-14 Score=164.56 Aligned_cols=268 Identities=17% Similarity=0.295 Sum_probs=184.8
Q ss_pred CeeeeeeeecccCCchhhHHHHHHHHHHHh-H----hhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCc
Q 002111 563 QLVRMANLCVVGSHAVNGVAEIHSEIVTNE-V----FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTED 637 (965)
Q Consensus 563 ~~v~MA~Lal~~S~~VNGVS~lHsei~k~~-v----f~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~ 637 (965)
+.+|+...++..|+.|+.||.-..+-+++. . ........+.|+.-|.|||....|- |.-...+.+
T Consensus 209 ~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~----p~~d~~~~~------ 278 (489)
T PRK14098 209 DEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWN----PSTDKLIKK------ 278 (489)
T ss_pred CcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccC----Ccccccccc------
Confidence 357888889999999999998777655431 0 0111122367899999999999994 532111111
Q ss_pred cccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHH
Q 002111 638 WVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKM 717 (965)
Q Consensus 638 W~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~i 717 (965)
+|..+ .+ +-|+.+|..| +++.|...+++....+++-|+..+|...+ ++..+.+ +
T Consensus 279 ------------~~~~~-----~~-~~k~~~k~~l----~~~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~---l 332 (489)
T PRK14098 279 ------------RYSIE-----RL-DGKLENKKAL----LEEVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEK---L 332 (489)
T ss_pred ------------cCCcc-----hh-hhHHHHHHHH----HHHhCCCCccCCCEEEEeccccccCcHHH-HHHHHHH---H
Confidence 11111 13 3566777554 45789999999999999999999999988 7776654 3
Q ss_pred HhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccccccccc
Q 002111 718 KEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHI 797 (965)
Q Consensus 718 k~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~ni 797 (965)
++ .+.++++.|...+. .-+.+.++++.. | + +|.|+..|+-+.+..++.+||+...-
T Consensus 333 ~~----------~~~~lvivG~G~~~------~~~~l~~l~~~~---~---~--~V~~~g~~~~~~~~~~~a~aDi~l~P 388 (489)
T PRK14098 333 VE----------LDIQLVICGSGDKE------YEKRFQDFAEEH---P---E--QVSVQTEFTDAFFHLAIAGLDMLLMP 388 (489)
T ss_pred Hh----------cCcEEEEEeCCCHH------HHHHHHHHHHHC---C---C--CEEEEEecCHHHHHHHHHhCCEEEeC
Confidence 32 14588888864321 222333333311 1 2 79999999999999999999999988
Q ss_pred CCCccccCCCccchhhcccceEeeeccccccccccccc--ccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 002111 798 STAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG--EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 875 (965)
Q Consensus 798 stag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg--~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~ 875 (965)
|. .|++|.+-|-+|..|++-|.|--|...|+..++. ..|+|+|..
T Consensus 389 S~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~------------------------------- 435 (489)
T PRK14098 389 GK--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHD------------------------------- 435 (489)
T ss_pred CC--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCC-------------------------------
Confidence 76 7999999999999999999998888887665432 246666632
Q ss_pred cCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHH
Q 002111 876 SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 955 (965)
Q Consensus 876 ~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~ 955 (965)
.+-+.|.+.|. ++...|.|++.|.++....++ -.||-++++++|. +
T Consensus 436 ------~d~~~la~ai~-------------------------~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~-~ 481 (489)
T PRK14098 436 ------YTPEALVAKLG-------------------------EALALYHDEERWEELVLEAME--RDFSWKNSAEEYA-Q 481 (489)
T ss_pred ------CCHHHHHHHHH-------------------------HHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHH-H
Confidence 12334444443 444567889999888765543 5899999999995 4
Q ss_pred Hh
Q 002111 956 IW 957 (965)
Q Consensus 956 IW 957 (965)
+|
T Consensus 482 lY 483 (489)
T PRK14098 482 LY 483 (489)
T ss_pred HH
Confidence 44
No 14
>PLN02939 transferase, transferring glycosyl groups
Probab=99.50 E-value=1.4e-11 Score=150.58 Aligned_cols=268 Identities=18% Similarity=0.256 Sum_probs=182.4
Q ss_pred CeeeeeeeecccCCchhhHHHHHHHHHHHhHh---hhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccc
Q 002111 563 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVF---NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 639 (965)
Q Consensus 563 ~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf---~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~ 639 (965)
+.+|+-..+++.|..|+-||.-+.+-+.+.-. .......+.|+.-|-|||....| ||.-...|..
T Consensus 682 ~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~w----nPatD~~L~~-------- 749 (977)
T PLN02939 682 GRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTW----NPSTDRFLKV-------- 749 (977)
T ss_pred CchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhc----CCcccccccc--------
Confidence 46888888999999999999888875554211 12234457899999999999999 4653222211
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCC-CCcceecccccccccccccchhhhHHHHHHHHH
Q 002111 640 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVS-PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 718 (965)
Q Consensus 640 ~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ld-pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik 718 (965)
.|-.+ .| +-|..+|.. ++++.|...+ ++..+.++|-|+++.|...+ ++..+.+. .
T Consensus 750 ----------~Ys~~-----dl-~GK~~nK~a----LRkelGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~L---l 805 (977)
T PLN02939 750 ----------QYNAN-----DL-QGKAANKAA----LRKQLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKT---A 805 (977)
T ss_pred ----------ccChh-----hh-hhhhhhhHH----HHHHhCCCcccccceEEEEeecCCcccChHH-HHHHHHHH---h
Confidence 11111 14 356666655 4667887654 77889999999999999998 77666543 2
Q ss_pred hcChhhhhccccCeEEEEeecC-CCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccccccccc
Q 002111 719 EMSAVERKAKFVPRVCIFGGKA-FATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHI 797 (965)
Q Consensus 719 ~~~~~~r~~~~~Pr~~IFaGKA-~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~ni 797 (965)
+ ...++|+.|.. .|.| -.. +..+++... ..+ +|.|+-.|+=.++..++.|||+-..-
T Consensus 806 ~----------~dvqLVIvGdGp~~~~--e~e----L~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmP 863 (977)
T PLN02939 806 E----------LGGQFVLLGSSPVPHI--QRE----FEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIP 863 (977)
T ss_pred h----------cCCEEEEEeCCCcHHH--HHH----HHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEEC
Confidence 2 03478888865 2322 222 233333221 223 79999999988999999999999998
Q ss_pred CCCccccCCCccchhhcccceEeeeccccccccccccc-------ccceEeeccchhhhhhhhhhcCCCCCCCChhHHHH
Q 002111 798 STAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG-------EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEV 870 (965)
Q Consensus 798 stag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg-------~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v 870 (965)
|+ .|.+|-+-|-+|.-|++.|.|--|.-.|+...+. ..|+|+|...
T Consensus 864 Sr--~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~------------------------- 916 (977)
T PLN02939 864 SM--FEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTP------------------------- 916 (977)
T ss_pred CC--ccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCC-------------------------
Confidence 87 6999999999999999999998888777654432 2577777431
Q ss_pred HHHHhcCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHH-HhcCHhHHHHHHHHhhhcCCCCChHHHH
Q 002111 871 KKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE-AYCDQKRWTRMSIMNTAGSSKFSSDRTI 949 (965)
Q Consensus 871 ~d~i~~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~-~Y~d~~~W~~~~i~niA~sg~FSSDRtI 949 (965)
+-..|.+.|. ++.. +..|+..|.+|....++ -.||-++++
T Consensus 917 ------------D~eaLa~AL~-------------------------rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A 957 (977)
T PLN02939 917 ------------DEQGLNSALE-------------------------RAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSA 957 (977)
T ss_pred ------------CHHHHHHHHH-------------------------HHHHHhccCHHHHHHHHHHHHH--hcCCHHHHH
Confidence 2233444443 2222 23578889888765443 579999999
Q ss_pred HHHHH
Q 002111 950 QEYAR 954 (965)
Q Consensus 950 ~eYa~ 954 (965)
++|.+
T Consensus 958 ~qYee 962 (977)
T PLN02939 958 SQYEE 962 (977)
T ss_pred HHHHH
Confidence 99964
No 15
>PRK14099 glycogen synthase; Provisional
Probab=99.40 E-value=1.5e-11 Score=142.63 Aligned_cols=265 Identities=16% Similarity=0.215 Sum_probs=176.2
Q ss_pred eeeeeeeecccCCchhhHHHHHHHHHHHhHh----hhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccc
Q 002111 564 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 639 (965)
Q Consensus 564 ~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf----~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~ 639 (965)
.++|...++..+..|+.||.-+.+-+++..+ .......+.|+.-|.|||....| ||.-...+....
T Consensus 199 ~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f----~p~~~~~~~~~~------ 268 (485)
T PRK14099 199 GIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVW----NPATDELIAATY------ 268 (485)
T ss_pred CccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhc----cccccchhhhcC------
Confidence 4566677888999999998887765543211 11223346789999999999999 454222111110
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHh
Q 002111 640 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKE 719 (965)
Q Consensus 640 ~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~ 719 (965)
+.+ .+ +.|..+|..| +++.|...+++.++.+++-|+.++|...+ ++..+.+ +.+
T Consensus 269 --------------~~~---~~-~~k~~~k~~l----~~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~---l~~ 322 (485)
T PRK14099 269 --------------DVE---TL-AARAANKAAL----QARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPT---LLG 322 (485)
T ss_pred --------------Chh---HH-HhHHHhHHHH----HHHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHH---HHh
Confidence 111 13 4566666554 56789888889999999999999999988 7766554 332
Q ss_pred cChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCC
Q 002111 720 MSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 799 (965)
Q Consensus 720 ~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nist 799 (965)
. ..++|+.|...+. +-+.+.++++ ..| + +|+++-.|+-.+++.+..+||+...-|.
T Consensus 323 -~---------~~~lvivG~G~~~------~~~~l~~l~~---~~~---~--~v~~~~G~~~~l~~~~~a~aDifv~PS~ 378 (485)
T PRK14099 323 -E---------GAQLALLGSGDAE------LEARFRAAAQ---AYP---G--QIGVVIGYDEALAHLIQAGADALLVPSR 378 (485)
T ss_pred -c---------CcEEEEEecCCHH------HHHHHHHHHH---HCC---C--CEEEEeCCCHHHHHHHHhcCCEEEECCc
Confidence 0 2467777764221 1222223332 112 2 5665667899999999899999999777
Q ss_pred CccccCCCccchhhcccceEeeecccccccccccc-------cccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHH
Q 002111 800 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-------GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKK 872 (965)
Q Consensus 800 ag~EASGTSnMKfamNGal~lgTlDGanvEI~e~v-------g~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d 872 (965)
.|.+|.+-|-+|.-|++-|.|--|.-.|+..+. |..|+|+|..
T Consensus 379 --~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~---------------------------- 428 (485)
T PRK14099 379 --FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP---------------------------- 428 (485)
T ss_pred --cCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC----------------------------
Confidence 799999999999999877777667666654332 2256666642
Q ss_pred HHhcCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHH
Q 002111 873 FVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 952 (965)
Q Consensus 873 ~i~~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eY 952 (965)
.+-+.|.+.|. ++...|.|++.|.+|....+ .-.||-+++.++|
T Consensus 429 ---------~d~~~La~ai~-------------------------~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y 472 (485)
T PRK14099 429 ---------VTADALAAALR-------------------------KTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHY 472 (485)
T ss_pred ---------CCHHHHHHHHH-------------------------HHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHH
Confidence 12344554443 44456788899988887665 3679999999999
Q ss_pred HH
Q 002111 953 AR 954 (965)
Q Consensus 953 a~ 954 (965)
.+
T Consensus 473 ~~ 474 (485)
T PRK14099 473 AA 474 (485)
T ss_pred HH
Confidence 54
No 16
>PLN02316 synthase/transferase
Probab=98.69 E-value=8.4e-07 Score=110.93 Aligned_cols=176 Identities=18% Similarity=0.260 Sum_probs=121.3
Q ss_pred CCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 002111 602 PEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG 681 (965)
Q Consensus 602 P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g 681 (965)
+.|+.-|-|||.+.+|- |.-...+... |..+ + +.+-|+.+|.. ++++.|
T Consensus 786 ~~Kl~vI~NGID~~~w~----P~tD~~lp~~------------------y~~~-~----~~~gK~~~k~~----Lr~~lG 834 (1036)
T PLN02316 786 LYKFHGILNGIDPDIWD----PYNDNFIPVP------------------YTSE-N----VVEGKRAAKEA----LQQRLG 834 (1036)
T ss_pred cCCEEEEECCccccccC----Cccccccccc------------------CCch-h----hhhhhhhhHHH----HHHHhC
Confidence 47899999999999994 5421111100 1101 0 11234455544 356778
Q ss_pred CcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhh
Q 002111 682 YSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV 761 (965)
Q Consensus 682 ~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~i 761 (965)
.. +++....++|-|+++.|-..| |+..+.+. .+ + +.++|+.|-. |.-..-..+.++...++.
T Consensus 835 L~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~l---l~-----~-----~~qlVIvG~G-pd~~~e~~l~~La~~Lg~-- 896 (1036)
T PLN02316 835 LK-QADLPLVGIITRLTHQKGIHL-IKHAIWRT---LE-----R-----NGQVVLLGSA-PDPRIQNDFVNLANQLHS-- 896 (1036)
T ss_pred CC-cccCeEEEEEeccccccCHHH-HHHHHHHH---hh-----c-----CcEEEEEeCC-CCHHHHHHHHHHHHHhCc--
Confidence 76 457888999999999999988 77766554 21 0 3477888854 432233445555544432
Q ss_pred cCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc
Q 002111 762 NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 834 (965)
Q Consensus 762 N~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~v 834 (965)
...+ +|.|.-.|+-.++..++.|||+-.--|+ .|.||-+-|-+|.-|++-|.|--|-..|+...+
T Consensus 897 ----~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~ 961 (1036)
T PLN02316 897 ----SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDV 961 (1036)
T ss_pred ----cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCeEEEcCCCcHhhcccc
Confidence 1223 7888888999999999999999998876 799999999999999999999888888876554
No 17
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.25 E-value=3.4e-05 Score=90.52 Aligned_cols=271 Identities=18% Similarity=0.250 Sum_probs=182.9
Q ss_pred CeeeeeeeecccCCchhhHHHHHHHHHHHhHh----hhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 002111 563 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 638 (965)
Q Consensus 563 ~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf----~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W 638 (965)
+.+++...++..+..|+-||.-+.+=+...-| .++-.....+++.|-|||.---| ||+-...+..
T Consensus 197 ~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~w----np~~d~~~~~------- 265 (487)
T COG0297 197 GQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLW----NPETDPYIAA------- 265 (487)
T ss_pred CcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEeccc----Ccccccchhc-------
Confidence 35788888999999999999888763332211 12233445778999999999999 4643222211
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 002111 639 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 718 (965)
Q Consensus 639 ~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik 718 (965)
.|..+ .|. .|..||..|-. +.|...+.+....+++-|+.++|=-+| ++.+++.. +.
T Consensus 266 -----------~y~~~-----~~~-~k~~nk~~L~~----~~gL~~~~~~pl~~~vsRl~~QKG~dl-~~~~i~~~--l~ 321 (487)
T COG0297 266 -----------NYSAE-----VLP-AKAENKVALQE----RLGLDVDLPGPLFGFVSRLTAQKGLDL-LLEAIDEL--LE 321 (487)
T ss_pred -----------cCCcc-----chh-hhHHHHHHHHH----HhCCCCCCCCcEEEEeeccccccchhH-HHHHHHHH--HH
Confidence 11111 142 47778877654 679999999999999999999999999 88887775 22
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 002111 719 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 798 (965)
Q Consensus 719 ~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nis 798 (965)
. .-|+|+=|.+-|.+..+ +..+++.+. + +|.+.-.|+..+|++|..|||+|.-=|
T Consensus 322 ~-----------~~~~vilG~gd~~le~~------~~~la~~~~------~--~~~~~i~~~~~la~~i~agaD~~lmPS 376 (487)
T COG0297 322 Q-----------GWQLVLLGTGDPELEEA------LRALASRHP------G--RVLVVIGYDEPLAHLIYAGADVILMPS 376 (487)
T ss_pred h-----------CceEEEEecCcHHHHHH------HHHHHHhcC------c--eEEEEeeecHHHHHHHHhcCCEEEeCC
Confidence 1 25899999997666654 444555333 2 799999999999999999999999666
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcC-
Q 002111 799 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSG- 877 (965)
Q Consensus 799 tag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~~g- 877 (965)
+ .|.||-+-|=+|.=|+|-|-. ++|+= ++-|.. .+++. ..-...|
T Consensus 377 r--fEPcGL~ql~amryGtvpIv~----------~tGGL--------adTV~~-----------~~~~~---~~~~gtGf 422 (487)
T COG0297 377 R--FEPCGLTQLYAMRYGTLPIVR----------ETGGL--------ADTVVD-----------RNEWL---IQGVGTGF 422 (487)
T ss_pred c--CcCCcHHHHHHHHcCCcceEc----------ccCCc--------cceecC-----------ccchh---ccCceeEE
Confidence 5 799999999999999966544 23211 111211 01111 0001122
Q ss_pred CCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhH-HHHHHHHhhhcCCCCChHHHHHHHHH
Q 002111 878 VFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKR-WTRMSIMNTAGSSKFSSDRTIQEYAR 954 (965)
Q Consensus 878 ~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~-W~~~~i~niA~sg~FSSDRtI~eYa~ 954 (965)
.|-+.+.+.|...|. +....|+++.. |.++....+. ..||-|++..+|.+
T Consensus 423 ~f~~~~~~~l~~al~-------------------------rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~ 473 (487)
T COG0297 423 LFLQTNPDHLANALR-------------------------RALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVE 473 (487)
T ss_pred EEecCCHHHHHHHHH-------------------------HHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHH
Confidence 122334556665554 66667888777 9887766555 89999999999975
No 18
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=97.00 E-value=0.019 Score=69.04 Aligned_cols=206 Identities=19% Similarity=0.249 Sum_probs=135.5
Q ss_pred eeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHH
Q 002111 567 MANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLA 646 (965)
Q Consensus 567 MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~ 646 (965)
|=..+...++.+--|| ++.+.+ -..++..-|++ =+-|||.+..|-.
T Consensus 219 iE~~aa~~Ad~fttVS----~it~~E-~~~Ll~~~pd~--ViPNGid~~~f~~--------------------------- 264 (590)
T cd03793 219 IERAAAHCAHVFTTVS----EITAYE-AEHLLKRKPDV--VLPNGLNVKKFSA--------------------------- 264 (590)
T ss_pred HHHHHHhhCCEEEECC----hHHHHH-HHHHhCCCCCE--EeCCCcchhhccc---------------------------
Confidence 3346778888999994 445443 34567777887 3459999988742
Q ss_pred HhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-hC-CcCCCCcceecc-cccccc-cccccchhhhHHHHHHHHHhcCh
Q 002111 647 ELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEK-TG-YSVSPDAMFDIQ-VKRIHE-YKRQLMNILGIVYRYKKMKEMSA 722 (965)
Q Consensus 647 ~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~-~g-~~ldpdslfdvq-~KR~he-YKRqlLNil~ii~ry~~ik~~~~ 722 (965)
.. +++..|...|.++.++++.. .| +.++|+..+..| +=|+.- -|=-++ ++.-+.|+++....+.
T Consensus 265 -------~~----e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~~~~ 332 (590)
T cd03793 265 -------LH----EFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLKVEG 332 (590)
T ss_pred -------ch----hhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHHhcC
Confidence 11 25578889999999987543 23 468888777777 799964 577777 7888888877644222
Q ss_pred hhhhccccCeEEEEeecCC-------CCcHHHHHHHHHHHHHhhhhcCC-------------------------------
Q 002111 723 VERKAKFVPRVCIFGGKAF-------ATYVQAKRIVKFITDVGATVNHD------------------------------- 764 (965)
Q Consensus 723 ~~r~~~~~Pr~~IFaGKA~-------P~y~~aK~IIk~I~~va~~iN~D------------------------------- 764 (965)
.+. .+=-.+||-+|.. -+...-|++-.-++++.+.|.+.
T Consensus 333 ~~~---tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~ 409 (590)
T cd03793 333 SDT---TVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFA 409 (590)
T ss_pred CCC---eEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHh
Confidence 111 1112345777644 12233333333333332222211
Q ss_pred -------c-------------------------CCCCcceEEEecCC--------ChhhhhhhccccccccccCCCcccc
Q 002111 765 -------P-------------------------EIGDLLKVIFVPDY--------NVSVAELLIPASELSQHISTAGMEA 804 (965)
Q Consensus 765 -------p-------------------------~i~~~LKVVFlenY--------nVslAe~LipasDvs~nistag~EA 804 (965)
| .-.++.||||.|.| +++. +.++.|||+..--|.. |.
T Consensus 410 ~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y-~E~~~g~dl~v~PS~y--E~ 486 (590)
T cd03793 410 LQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDY-EEFVRGCHLGVFPSYY--EP 486 (590)
T ss_pred hccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcch-HHHhhhceEEEecccc--CC
Confidence 1 12578999999998 5544 4457999999988877 99
Q ss_pred CCCccchhhcccceEeeecc
Q 002111 805 SGTSNMKFAMNGCILIGTLD 824 (965)
Q Consensus 805 SGTSnMKfamNGal~lgTlD 824 (965)
-|---+-+|.-|++.|.|--
T Consensus 487 fG~~~lEAma~G~PvI~t~~ 506 (590)
T cd03793 487 WGYTPAECTVMGIPSITTNL 506 (590)
T ss_pred CCcHHHHHHHcCCCEEEccC
Confidence 99999999999999999955
No 19
>PLN00142 sucrose synthase
Probab=96.92 E-value=0.01 Score=73.89 Aligned_cols=145 Identities=12% Similarity=0.108 Sum_probs=95.3
Q ss_pred HhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCC---cHHHHHHHHHHH
Q 002111 679 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFAT---YVQAKRIVKFIT 755 (965)
Q Consensus 679 ~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~---y~~aK~IIk~I~ 755 (965)
..|..-+++.-+++++=|+..+|.... ++..+.+..++. +. .+-+|.||...|. +......++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~---~~-------~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR---EL-------VNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC---CC-------cEEEEEECCccccccccHHHHHHHHHHH
Confidence 456655788878899999999999987 665544433221 10 2234455542332 223333344444
Q ss_pred HHhhhhcCCcCCCCcceEEEecC---C--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 002111 756 DVGATVNHDPEIGDLLKVIFVPD---Y--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 830 (965)
Q Consensus 756 ~va~~iN~Dp~i~~~LKVVFlen---Y--nVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI 830 (965)
.+++ +-.+.+ +|.|+.. + +-.+.+.+-.++|+..+.|. .|+.|.+-+=+|.-|++.|+|-.|-..||
T Consensus 633 ~La~----~lgL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIE----KYNLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHH----HcCCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 4444 233556 6888753 2 12344444457899988765 79999999999999999999999999988
Q ss_pred cccccccceEeecc
Q 002111 831 RQEVGEENFFLFGA 844 (965)
Q Consensus 831 ~e~vg~eN~fiFG~ 844 (965)
.+.. .|+|++-.
T Consensus 705 V~dG--~tG~LV~P 716 (815)
T PLN00142 705 IVDG--VSGFHIDP 716 (815)
T ss_pred hcCC--CcEEEeCC
Confidence 7653 78888853
No 20
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=96.91 E-value=0.013 Score=72.84 Aligned_cols=144 Identities=17% Similarity=0.183 Sum_probs=97.7
Q ss_pred HhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC---CcHHHHHHHHHHH
Q 002111 679 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFIT 755 (965)
Q Consensus 679 ~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P---~y~~aK~IIk~I~ 755 (965)
..|...+|+.-+++++=|+...|.... ++..+.+..++.. .+.-+|.||...+ .+...+..++.+.
T Consensus 541 ~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~~----------~~~LVIVGGg~~~~~s~d~ee~~~i~~L~ 609 (784)
T TIGR02470 541 HYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLRE----------LVNLVVVAGKLDAKESKDREEQAEIEKMH 609 (784)
T ss_pred HhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhCC----------CeEEEEEeCCcccccccchhHHHHHHHHH
Confidence 457777899999999999999999876 5554433322221 1345666776432 2444445566665
Q ss_pred HHhhhhcCCcCCCCcceEEEecCC--Chhhhhh---hccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 002111 756 DVGATVNHDPEIGDLLKVIFVPDY--NVSVAEL---LIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 830 (965)
Q Consensus 756 ~va~~iN~Dp~i~~~LKVVFlenY--nVslAe~---LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI 830 (965)
++++. -.+.+ +|.|+--. ...+++. +-.++||.-+.|. .|+.|-.-+=+|.-|++.|+|-.|-..||
T Consensus 610 ~la~~----~gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~Ei 681 (784)
T TIGR02470 610 NLIDQ----YQLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEI 681 (784)
T ss_pred HHHHH----hCCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 55542 23556 78876521 1233333 3346789988775 79999999999999999999999999987
Q ss_pred cccccccceEeec
Q 002111 831 RQEVGEENFFLFG 843 (965)
Q Consensus 831 ~e~vg~eN~fiFG 843 (965)
.+. +.|+|+|-
T Consensus 682 V~d--g~tGfLVd 692 (784)
T TIGR02470 682 IQD--GVSGFHID 692 (784)
T ss_pred hcC--CCcEEEeC
Confidence 754 37888874
No 21
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.88 E-value=0.012 Score=64.82 Aligned_cols=132 Identities=17% Similarity=0.151 Sum_probs=90.9
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|+..+|...+ ++..+.+ +.. +.++++.|...........+.+++..++.
T Consensus 197 ~~~~~~~i~~~Grl~~~Kg~~~-li~a~~~---l~~-----------~~~l~i~g~g~~~~~~~~~~~~~~~~~~~---- 257 (388)
T TIGR02149 197 IDRSRPYILFVGRITRQKGVPH-LLDAVHY---IPK-----------DVQVVLCAGAPDTPEVAEEVRQAVALLDR---- 257 (388)
T ss_pred CCCCceEEEEEcccccccCHHH-HHHHHHH---Hhh-----------cCcEEEEeCCCCcHHHHHHHHHHHHHhcc----
Confidence 4567777889999999999887 6655443 221 23455655443333334455555544432
Q ss_pred CcCCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 764 DPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 764 Dp~i~~~LKVVFlen-YnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
. .+ +|+|+.. +.-+-...++.+||+-...|. .|..|.+-|-+|.-|++.|+|-.|...|+.++ +.|+++|
T Consensus 258 ~---~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~ 328 (388)
T TIGR02149 258 N---RT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVD--GETGFLV 328 (388)
T ss_pred c---cC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEc
Confidence 1 11 4888765 456666778899999988775 59999999999999999999988888876653 3577777
Q ss_pred c
Q 002111 843 G 843 (965)
Q Consensus 843 G 843 (965)
-
T Consensus 329 ~ 329 (388)
T TIGR02149 329 P 329 (388)
T ss_pred C
Confidence 4
No 22
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=96.85 E-value=0.0096 Score=62.71 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=91.1
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
..++....+++-|+++.|+..+ ++..+.++.+- ..+.++++.|+..+.+....+.+ +...
T Consensus 199 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~-----------~~~~~l~i~G~~~~~~~~~~~~~--~~~~------ 258 (375)
T cd03821 199 ILPDKRIILFLGRLHPKKGLDL-LIEAFAKLAER-----------FPDWHLVIAGPDEGGYRAELKQI--AAAL------ 258 (375)
T ss_pred CCCCCcEEEEEeCcchhcCHHH-HHHHHHHhhhh-----------cCCeEEEEECCCCcchHHHHHHH--HHhc------
Confidence 3456777888999999999887 76665543221 12568999998776655433322 1111
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
.+.+ +|.|+....-+--..++..||+....|.. |..|++-+-+|..|++.|+|-.|...|+... +++++..
T Consensus 259 --~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~---~~~~~~~ 329 (375)
T cd03821 259 --GLED--RVTFTGMLYGEDKAAALADADLFVLPSHS--ENFGIVVAEALACGTPVVTTDKVPWQELIEY---GCGWVVD 329 (375)
T ss_pred --Cccc--eEEEcCCCChHHHHHHHhhCCEEEecccc--CCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc---CceEEeC
Confidence 2223 68888765544455567889999987776 9999999999999999999988877776543 4555544
Q ss_pred c
Q 002111 844 A 844 (965)
Q Consensus 844 ~ 844 (965)
.
T Consensus 330 ~ 330 (375)
T cd03821 330 D 330 (375)
T ss_pred C
Confidence 3
No 23
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.78 E-value=0.0035 Score=61.87 Aligned_cols=120 Identities=18% Similarity=0.105 Sum_probs=89.0
Q ss_pred ccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcce
Q 002111 693 QVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLK 772 (965)
Q Consensus 693 q~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LK 772 (965)
++-|+..+|...+ ++..+.+..+- ....+++|.|+..+.+...+.+. .. ...+ +
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~~-----------~~~~~~~i~G~~~~~~~~~~~~~----~~--------~~~~--~ 162 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKER-----------GPDLKLVIAGDGPEREYLEELLA----AL--------LLLD--R 162 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHHh-----------CCCeEEEEEeCCCChHHHHHHHH----hc--------CCcc--c
Confidence 8889999998877 55554443221 12568999999988776665521 11 1222 7
Q ss_pred EEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 773 VIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 773 VVFlenY-nVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
|.|++.+ .....+.+..+||+....|+. |+.|++-+-+|..|++.|+|-+|++-|+.++ ++++|+|
T Consensus 163 v~~~~~~~~~~~~~~~~~~~di~l~~~~~--e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 163 VIFLGGLDPEELLALLLAAADVFVLPSLR--EGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEEeCCCCcHHHHHHHhhcCCEEEecccc--cCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 9999987 567777788889999987775 5999999999999999999999999986543 3677765
No 24
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.73 E-value=0.0039 Score=61.05 Aligned_cols=132 Identities=20% Similarity=0.222 Sum_probs=94.0
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
...+..+.+++-|+..+|+..+ ++..+.++.+=+ .....+++.|.. ...+.+..++....
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~----------~~~~~l~i~G~~----~~~~~~~~~~~~~~----- 70 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKK----------NPNYKLVIVGDG----EYKKELKNLIEKLN----- 70 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHH----------HTTEEEEEESHC----CHHHHHHHHHHHTT-----
T ss_pred CCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhc----------CCCeEEEEEccc----cccccccccccccc-----
Confidence 4567889999999999999998 887777654321 125688999911 12222333333222
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+.+ +|.|+....-.-...++..||+..+.|+. |..|++-+-+|..|++.|.|--|.+-|+..+. .|+++|-
T Consensus 71 ---~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~~--e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~~ 141 (172)
T PF00534_consen 71 ---LKE--NIIFLGYVPDDELDELYKSSDIFVSPSRN--EGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLFD 141 (172)
T ss_dssp ---CGT--TEEEEESHSHHHHHHHHHHTSEEEE-BSS--BSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEES
T ss_pred ---ccc--cccccccccccccccccccceeccccccc--cccccccccccccccceeeccccCCceeeccc--cceEEeC
Confidence 222 58888877655566777889999999999 99999999999999999999989999988766 4888885
Q ss_pred c
Q 002111 844 A 844 (965)
Q Consensus 844 ~ 844 (965)
.
T Consensus 142 ~ 142 (172)
T PF00534_consen 142 P 142 (172)
T ss_dssp T
T ss_pred C
Confidence 3
No 25
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.61 E-value=0.013 Score=64.60 Aligned_cols=147 Identities=18% Similarity=0.187 Sum_probs=98.6
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.++..+.+++-|+.+.|.+.+ ++..+.++.+- .+ . .....+++.|...+.....-.....+.+.++..
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~~---~~-~----~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~--- 275 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIAL-AIEAFAILKDK---LA-E----FKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL--- 275 (392)
T ss_pred CCCceEEEEEeeecccCChHH-HHHHHHHHHhh---cc-c----ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---
Confidence 456788889999999999988 77766664322 10 0 124678888876554333323333333333310
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
..+.+ +|+|+....-.....++.+||+....|. .|.-|.+-+-+|..|++.|+|--|...|+... ..+++++..
T Consensus 276 ~~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~--~~~g~~~~~ 349 (392)
T cd03805 276 LLLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVD--GETGFLCEP 349 (392)
T ss_pred cCCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhcc--CCceEEeCC
Confidence 12334 7999998766655678899999887665 59999999999999999999977877776543 256777754
Q ss_pred chhhh
Q 002111 845 RAHEI 849 (965)
Q Consensus 845 ~~~ev 849 (965)
+.+++
T Consensus 350 ~~~~~ 354 (392)
T cd03805 350 TPEEF 354 (392)
T ss_pred CHHHH
Confidence 44333
No 26
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=96.55 E-value=0.018 Score=60.14 Aligned_cols=129 Identities=18% Similarity=0.019 Sum_probs=91.0
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.++....+++-|+..+|+..+ ++..+.+ +++. ..+.++++.|...+.+...+. ++....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~---l~~~--------~~~~~l~i~G~~~~~~~~~~~---~~~~~~------ 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARI---LKAK--------GPNVRLLLVGDGDEENPAAIL---EIEKLG------ 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHH---HHhc--------CCCeEEEEEcCCCcchhhHHH---HHHhcC------
Confidence 456788889999999999877 6655444 4320 125689999988877665544 222211
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
..+ +|.|+.. .+-...++..||+-...|.. |..|++-+-+|..|++.|+|-.|..-|+.++ .++++++..
T Consensus 244 --~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~~--e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~~~ 313 (359)
T cd03808 244 --LEG--RVEFLGF--RDDVPELLAAADVFVLPSYR--EGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLVPP 313 (359)
T ss_pred --Ccc--eEEEeec--cccHHHHHHhccEEEecCcc--cCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEECC
Confidence 112 6777765 44556788899998876655 9999999999999999999977777776644 367777753
No 27
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=96.49 E-value=0.043 Score=61.34 Aligned_cols=136 Identities=17% Similarity=0.137 Sum_probs=92.2
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC-CcHHHHHHHHHHHHHhhhhc
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA-TYVQAKRIVKFITDVGATVN 762 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P-~y~~aK~IIk~I~~va~~iN 762 (965)
++++....+++-|+..+|...+ ++..+.+ +++..++ ...++++.|.+.+ ++..-.++.+++...
T Consensus 215 ~~~~~~~i~~~G~l~~~K~~~~-li~a~~~---l~~~~~~------~~~~l~ivG~~~~~g~~~~~~l~~~~~~~----- 279 (405)
T TIGR03449 215 LPLDTKVVAFVGRIQPLKAPDV-LLRAVAE---LLDRDPD------RNLRVIVVGGPSGSGLATPDALIELAAEL----- 279 (405)
T ss_pred CCCCCcEEEEecCCCcccCHHH-HHHHHHH---HHhhCCC------cceEEEEEeCCCCCcchHHHHHHHHHHHc-----
Confidence 4566778889999999998876 6555444 4321111 1257788886442 323334455554333
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 763 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 763 ~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
.+.+ +|.|+..-.-+-...++.+||+-...|. .|..|++-+-+|.-|++.|+|-.|...|+.++. .+++++
T Consensus 280 ---~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~--~~g~~~ 350 (405)
T TIGR03449 280 ---GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAMEAQACGTPVVAARVGGLPVAVADG--ETGLLV 350 (405)
T ss_pred ---CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhccC--CceEEC
Confidence 2333 6888875445555678999999988776 588999999999999999999889888766432 666766
Q ss_pred c
Q 002111 843 G 843 (965)
Q Consensus 843 G 843 (965)
-
T Consensus 351 ~ 351 (405)
T TIGR03449 351 D 351 (405)
T ss_pred C
Confidence 4
No 28
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.45 E-value=0.032 Score=65.01 Aligned_cols=124 Identities=14% Similarity=0.086 Sum_probs=89.2
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
+++....+++-|+...|.... ++..+.. +++. .....+++.|.........+++-+++.+.+
T Consensus 290 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~~--------~p~~~l~IvG~g~~~~~~~~e~~~li~~l~------ 351 (475)
T cd03813 290 EKEPPVVGLIGRVVPIKDIKT-FIRAAAI---VRKK--------IPDAEGWVIGPTDEDPEYAEECRELVESLG------ 351 (475)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHH---HHHh--------CCCeEEEEECCCCcChHHHHHHHHHHHHhC------
Confidence 356778899999999999877 6655544 4320 124578888865444445566666665544
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 835 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg 835 (965)
+.+ +|.|+. ...+.+ +++++|+-...|. .|+.|+.-+=+|.-|++.|+|--|...|+.++.+
T Consensus 352 --l~~--~V~f~G--~~~v~~-~l~~aDv~vlpS~--~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~ 413 (475)
T cd03813 352 --LED--NVKFTG--FQNVKE-YLPKLDVLVLTSI--SEGQPLVILEAMAAGIPVVATDVGSCRELIEGAD 413 (475)
T ss_pred --CCC--eEEEcC--CccHHH-HHHhCCEEEeCch--hhcCChHHHHHHHcCCCEEECCCCChHHHhcCCc
Confidence 223 788988 445554 5689999998876 6999999999999999999998888888776643
No 29
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=96.34 E-value=0.044 Score=59.93 Aligned_cols=134 Identities=13% Similarity=0.064 Sum_probs=86.4
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeec-CCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK-AFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGK-A~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
.++....+++=|+...|...+ ++..+.++.+. . .+.++++.|. ..+.......-++.+..--
T Consensus 217 ~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~---~--------~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~----- 279 (398)
T cd03800 217 DPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL---R--------ERANLVIVGGPRDDILAMDEEELRELAREL----- 279 (398)
T ss_pred CCCCcEEEEEcccccccCHHH-HHHHHHHHHHh---C--------CCeEEEEEECCCCcchhhhhHHHHHHHHhc-----
Confidence 455677789999999888776 66655443322 1 1345555554 4333222222222222211
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
.+.+ +|.|++-..-+-...++..||+-...|. .|..|.+-+-+|..|.+.|++-.|..-|+.++. +++++|.
T Consensus 280 --~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~~ 351 (398)
T cd03800 280 --GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDG--VTGLLVD 351 (398)
T ss_pred --CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCC--CCeEEeC
Confidence 1222 6889988766666677888999887665 589999999999999999999888877765443 4666663
No 30
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.31 E-value=0.089 Score=58.46 Aligned_cols=134 Identities=15% Similarity=0.084 Sum_probs=88.2
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++..+.+++=|++..|.+.+ ++..+....+. . ...+++++|...+.....+.+.+.+....
T Consensus 186 ~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~---~--------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~----- 248 (372)
T cd03792 186 IDPERPYITQVSRFDPWKDPFG-VIDAYRKVKER---V--------PDPQLVLVGSGATDDPEGWIVYEEVLEYA----- 248 (372)
T ss_pred CCCCCcEEEEEeccccccCcHH-HHHHHHHHHhh---C--------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-----
Confidence 5678888999999999999998 76655543222 1 13467788876544333344444433321
Q ss_pred CcCCCCcceEEEecCC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEe
Q 002111 764 DPEIGDLLKVIFVPDY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 841 (965)
Q Consensus 764 Dp~i~~~LKVVFlenY--nVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fi 841 (965)
.+.+ +|+|+... .-.....++.+||+-...|+ .|..|-+-+=+|..|.+.|+|--|...|+.+ .+.++++
T Consensus 249 --~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~--~~~~g~~ 320 (372)
T cd03792 249 --EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIE--DGETGFL 320 (372)
T ss_pred --CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhcc--cCCceEE
Confidence 1223 57887665 44555678999999976655 6889999999999999999996655554332 2245554
Q ss_pred e
Q 002111 842 F 842 (965)
Q Consensus 842 F 842 (965)
+
T Consensus 321 ~ 321 (372)
T cd03792 321 V 321 (372)
T ss_pred e
Confidence 4
No 31
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.20 E-value=0.031 Score=62.92 Aligned_cols=134 Identities=15% Similarity=0.151 Sum_probs=92.7
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
+++....+++-|+...|.+.+ ++..+. .+++ . ....+++++|.. |.. ..+-+++...
T Consensus 190 ~~~~~~i~~~grl~~~Kg~~~-li~a~~---~l~~-~-------~~~~~l~i~G~g-~~~---~~l~~~~~~~------- 246 (398)
T cd03796 190 DNDKITIVVISRLVYRKGIDL-LVGIIP---EICK-K-------HPNVRFIIGGDG-PKR---ILLEEMREKY------- 246 (398)
T ss_pred CCCceEEEEEeccchhcCHHH-HHHHHH---HHHh-h-------CCCEEEEEEeCC-chH---HHHHHHHHHh-------
Confidence 357788889999999999987 665543 3432 1 124688899964 322 2233333322
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
.+.+ +|.|+...+-+-...++++||+-...|. .|..|.+-+=+|..|++-|+|--|...|+.++ .++++...
T Consensus 247 -~l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~---~~~~~~~~ 318 (398)
T cd03796 247 -NLQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP---DMILLAEP 318 (398)
T ss_pred -CCCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeC---CceeecCC
Confidence 2334 6888876665666678899999998876 59999999999999999999998988887754 23444443
Q ss_pred chhhh
Q 002111 845 RAHEI 849 (965)
Q Consensus 845 ~~~ev 849 (965)
+.+++
T Consensus 319 ~~~~l 323 (398)
T cd03796 319 DVESI 323 (398)
T ss_pred CHHHH
Confidence 44443
No 32
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.03 E-value=0.05 Score=61.17 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=88.9
Q ss_pred CCCCcceeccccc-ccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHH----H-HHHHHHHHH
Q 002111 684 VSPDAMFDIQVKR-IHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA----K-RIVKFITDV 757 (965)
Q Consensus 684 ldpdslfdvq~KR-~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~a----K-~IIk~I~~v 757 (965)
+.++....+++=| +..+|...+ ++..+.+ +++.. ....+++.|...|.|... . ..-+++..+
T Consensus 207 ~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~---l~~~~--------~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 207 LTPGDEVITFVARNLEPYRGFHV-FMRALPR---LLRAR--------PDARVVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred CCCCCeEEEEECCCcccccCHHH-HHHHHHH---HHHHC--------CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 4566677788877 999998877 6665554 33201 235678888755544211 1 111233333
Q ss_pred hhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccccc
Q 002111 758 GATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 837 (965)
Q Consensus 758 a~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~e 837 (965)
+...+ .+ +|.|+....-.-...++.+||+....|. .|..|.+-+-+|.-|++.|+|-.|...|+.++ ++
T Consensus 275 ~~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~ 343 (396)
T cd03818 275 GGRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITD--GE 343 (396)
T ss_pred hcccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhccc--CC
Confidence 32111 12 7999987554455567899999987775 47777788899999999999988887777644 26
Q ss_pred ceEeec
Q 002111 838 NFFLFG 843 (965)
Q Consensus 838 N~fiFG 843 (965)
|++++-
T Consensus 344 ~G~lv~ 349 (396)
T cd03818 344 NGLLVD 349 (396)
T ss_pred ceEEcC
Confidence 777764
No 33
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.00 E-value=0.053 Score=69.25 Aligned_cols=185 Identities=14% Similarity=0.202 Sum_probs=116.5
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc------HHHHHHHHHHHHHh
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY------VQAKRIVKFITDVG 758 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y------~~aK~IIk~I~~va 758 (965)
+|+..+++++=|+...|.... ++..+.++.++.+ ....++|.|+...... ....++.++|..+
T Consensus 476 ~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~---------~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~l- 544 (1050)
T TIGR02468 476 NPRKPMILALARPDPKKNITT-LVKAFGECRPLRE---------LANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKY- 544 (1050)
T ss_pred cCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc---------CCCEEEEEecCchhhhhhccchHHHHHHHHHHHHh-
Confidence 688889999999999999887 7766655543321 1123445444221110 1123344444333
Q ss_pred hhhcCCcCCCCcceEEEecCCCh-hhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 002111 759 ATVNHDPEIGDLLKVIFVPDYNV-SVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 833 (965)
Q Consensus 759 ~~iN~Dp~i~~~LKVVFlenYnV-slAe~Lipas----Dvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~ 833 (965)
.+.+ +|.|+.--.- .+++ ++.+| ||.-+.|. .|.-|..-+=+|.-|.+.|+|-.|...||.+.
T Consensus 545 -------gL~g--~V~FlG~v~~edvp~-lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~ 612 (1050)
T TIGR02468 545 -------DLYG--QVAYPKHHKQSDVPD-IYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRV 612 (1050)
T ss_pred -------CCCC--eEEecCCCCHHHHHH-HHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhcc
Confidence 3455 6887653222 3333 34444 68777666 69999999999999999999999999998765
Q ss_pred ccccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHH
Q 002111 834 VGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYL 913 (965)
Q Consensus 834 vg~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~ 913 (965)
. +|+++|-.. +-+.|-+
T Consensus 613 g--~nGlLVdP~-------------------------------------D~eaLA~------------------------ 629 (1050)
T TIGR02468 613 L--DNGLLVDPH-------------------------------------DQQAIAD------------------------ 629 (1050)
T ss_pred C--CcEEEECCC-------------------------------------CHHHHHH------------------------
Confidence 4 788887421 1222222
Q ss_pred HHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcc
Q 002111 914 ECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 959 (965)
Q Consensus 914 ~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i 959 (965)
.+.+.+.|+..|.+|+.......-.||-++++++|.+.+=.+
T Consensus 630 ----AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 630 ----ALLKLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred ----HHHHHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 222334567777777665554444699999999998776544
No 34
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=95.98 E-value=0.086 Score=55.39 Aligned_cols=127 Identities=19% Similarity=0.159 Sum_probs=85.5
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++..+.+++-|++.+|+..+ ++..+.+ +++ . ..+..+++.|....... -+..++ .
T Consensus 189 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~---l~~-~-------~~~~~l~i~G~~~~~~~-~~~~~~------~---- 245 (365)
T cd03807 189 LPEDTFLIGIVARLHPQKDHAT-LLRAAAL---LLK-K-------FPNARLLLVGDGPDRAN-LELLAL------K---- 245 (365)
T ss_pred CCCCCeEEEEecccchhcCHHH-HHHHHHH---HHH-h-------CCCeEEEEecCCcchhH-HHHHHH------H----
Confidence 4567788899999999999876 6655444 432 1 12568999998654332 222222 0
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+-.+.+ +|.|+.. ++-...++..||+-...|.. |..|++-+-+|.-|++.|+|--|+.-|+.++ ++++|.
T Consensus 246 ~~~~~~--~v~~~g~--~~~~~~~~~~adi~v~ps~~--e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~ 315 (365)
T cd03807 246 ELGLED--KVILLGE--RSDVPALLNALDVFVLSSLS--EGFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVP 315 (365)
T ss_pred hcCCCc--eEEEccc--cccHHHHHHhCCEEEeCCcc--ccCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeC
Confidence 111223 5777653 23344678999999887666 9999999999999999999988887766533 556654
No 35
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.90 E-value=0.11 Score=56.62 Aligned_cols=126 Identities=19% Similarity=0.270 Sum_probs=86.2
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
+.++....+++-|+..+|.... ++..+ .++++ . .|.++++.|.. |. .+.+.+++...+
T Consensus 193 ~~~~~~~il~~g~l~~~K~~~~-li~a~---~~l~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~----- 250 (371)
T cd04962 193 APEGEKVLIHISNFRPVKRIDD-VIRIF---AKVRK-E--------VPARLLLVGDG-PE---RSPAERLARELG----- 250 (371)
T ss_pred CCCCCeEEEEecccccccCHHH-HHHHH---HHHHh-c--------CCceEEEEcCC-cC---HHHHHHHHHHcC-----
Confidence 4567777889999999999877 65444 33442 1 25678888864 22 233333333222
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
+.+ +|.|+..- +-...++.+||+....|+ .|+.|.+-+-+|..|++.|+|-.|...|+.++. .|+|+|
T Consensus 251 ---~~~--~v~~~g~~--~~~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~--~~G~~~ 318 (371)
T cd04962 251 ---LQD--DVLFLGKQ--DHVEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKHG--ETGFLV 318 (371)
T ss_pred ---CCc--eEEEecCc--ccHHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCC--CceEEc
Confidence 233 68888743 334566889999998875 799999999999999999999888776655442 566665
No 36
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=95.87 E-value=0.14 Score=54.57 Aligned_cols=134 Identities=13% Similarity=0.057 Sum_probs=85.0
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHH-HHHHHHHhhhhcC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI-VKFITDVGATVNH 763 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~I-Ik~I~~va~~iN~ 763 (965)
.++....+++-|++++|...+ ++..+.+ +++. ..+.++++.|..++....-+.. .++|...+
T Consensus 182 ~~~~~~i~~~G~~~~~K~~~~-ll~a~~~---~~~~--------~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~----- 244 (366)
T cd03822 182 LDGRPVLLTFGLLRPYKGLEL-LLEALPL---LVAK--------HPDVRLLVAGETHPDLERYRGEAYALAERLG----- 244 (366)
T ss_pred CCCCeEEEEEeeccCCCCHHH-HHHHHHH---HHhh--------CCCeEEEEeccCccchhhhhhhhHhHHHhcC-----
Confidence 345677788899999998776 6655554 3321 1256888999877655433221 12233322
Q ss_pred CcCCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 764 DPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 764 Dp~i~~~LKVVFlen-YnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
+.+ +|.|++. ..-+-...++..||+-...|+...+.-|..-+-+|.-|.+.|+|-.|. .|... ...++++|
T Consensus 245 ---~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~--~~~~g~~~ 316 (366)
T cd03822 245 ---LAD--RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVL--DGGTGLLV 316 (366)
T ss_pred ---CCC--cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheee--eCCCcEEE
Confidence 233 6999988 445556678889999887655333345555566789999999997777 44332 23566666
Q ss_pred c
Q 002111 843 G 843 (965)
Q Consensus 843 G 843 (965)
.
T Consensus 317 ~ 317 (366)
T cd03822 317 P 317 (366)
T ss_pred c
Confidence 4
No 37
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=95.84 E-value=0.1 Score=55.63 Aligned_cols=120 Identities=15% Similarity=0.042 Sum_probs=85.1
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.++....+++-|+..+|+..+ ++..+.. +++ . ..+..+++.|...+.+......+ ...
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~-~l~~~~~---~~~----~----~~~~~l~i~G~~~~~~~~~~~~~---~~~------- 249 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLER-LLEAFAR---LPA----K----GPDPKLVIVGKRGWLNEELLARL---REL------- 249 (365)
T ss_pred CCCCCeEEEeCCCccccCHHH-HHHHHHH---HHH----h----cCCCCEEEecCCccccHHHHHHH---HHc-------
Confidence 445677889999999998776 6655443 432 1 11467888888777766655444 111
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 831 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~ 831 (965)
...+ +|.|+...+-.-...++.+||+....|+ .|..|.+-+-+|.-|++.|+|--|+..|+.
T Consensus 250 -~~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~ 311 (365)
T cd03809 250 -GLGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVA 311 (365)
T ss_pred -CCCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCcccee
Confidence 1223 6888877766666778899999887665 488888899999999999999777776654
No 38
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=95.81 E-value=0.11 Score=59.54 Aligned_cols=128 Identities=18% Similarity=0.120 Sum_probs=88.2
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 002111 688 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 767 (965)
Q Consensus 688 slfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i 767 (965)
.+..+++-|+.++|.... ++..+.+ +++ . ..+.++++.|.. . .-.++.+++.+.+ +
T Consensus 222 ~~~il~vGrl~~~Kg~~~-ll~a~~~---l~~-~-------~~~~~l~ivG~G---~-~~~~l~~~~~~~~--------l 277 (406)
T PRK15427 222 PLEIISVARLTEKKGLHV-AIEACRQ---LKE-Q-------GVAFRYRILGIG---P-WERRLRTLIEQYQ--------L 277 (406)
T ss_pred CeEEEEEeCcchhcCHHH-HHHHHHH---HHh-h-------CCCEEEEEEECc---h-hHHHHHHHHHHcC--------C
Confidence 456778999999999887 6665544 432 0 124577777752 1 2234555554433 2
Q ss_pred CCcceEEEecCCChhhhhhhccccccccccCCCc----cccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 768 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAG----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 768 ~~~LKVVFlenYnVslAe~LipasDvs~nistag----~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
.+ +|.|+.-..-+-...++.+||+....|..+ +|+.|..-|=+|.-|.+.|+|-.|...|+.+.. +|++++-
T Consensus 278 ~~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~--~~G~lv~ 353 (406)
T PRK15427 278 ED--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD--KSGWLVP 353 (406)
T ss_pred CC--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCC--CceEEeC
Confidence 33 677776544444456889999999888764 688889999999999999999888888776543 6777774
No 39
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=95.81 E-value=0.12 Score=59.63 Aligned_cols=138 Identities=15% Similarity=0.110 Sum_probs=87.8
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC--CcH-HHHHHHHHHHHHhhhh
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA--TYV-QAKRIVKFITDVGATV 761 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P--~y~-~aK~IIk~I~~va~~i 761 (965)
+|+..+.+++=|+++.|.+.+ ++..+.++.++++ .|..+|++|..-. ... ..+...+.+..+++.
T Consensus 245 ~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~----------~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~- 312 (439)
T TIGR02472 245 DPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE----------MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDR- 312 (439)
T ss_pred ccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh----------hccEEEEeCCccccccccHHHHHHHHHHHHHHHH-
Confidence 566778889999999999988 7776655433332 1333445664221 111 222333333333331
Q ss_pred cCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeeccccccccccccccc
Q 002111 762 NHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 837 (965)
Q Consensus 762 N~Dp~i~~~LKVVFlenYnVslAe~Lipas----Dvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~e 837 (965)
-.+.+ +|.|+....-+-...++.+| |+-..-|. .|+-|..-+=+|.-|++.|+|--|...|+.++ .+
T Consensus 313 ---~~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~ 383 (439)
T TIGR02472 313 ---YDLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CR 383 (439)
T ss_pred ---cCCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CC
Confidence 12445 68888654433334555555 88776665 59999999999999999999988888887643 26
Q ss_pred ceEeec
Q 002111 838 NFFLFG 843 (965)
Q Consensus 838 N~fiFG 843 (965)
|+|++-
T Consensus 384 ~G~lv~ 389 (439)
T TIGR02472 384 NGLLVD 389 (439)
T ss_pred cEEEeC
Confidence 787774
No 40
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.54 E-value=0.042 Score=58.91 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=92.1
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
.+....+++-|+.++|+... ++..+..+. ...+++.|..- ....+.+++...+
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~---------------~~~l~i~G~g~----~~~~~~~~~~~~~------- 241 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDV-LLEAAAALP---------------DAPLVIVGEGP----LEAELEALAAALG------- 241 (357)
T ss_pred CCCcEEEEecccccccCHHH-HHHHHHhcc---------------CcEEEEEeCCh----hHHHHHHHHHhcC-------
Confidence 45677889999999998877 665544321 34788888642 2233334432222
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
..+ +|.|++..+=+-...++..||+-...|+...|..|.+-+-+|..|.+.|+|-.|...|..+. .++|++++..
T Consensus 242 -~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~~~ 316 (357)
T cd03795 242 -LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL-HGVTGLVVPP 316 (357)
T ss_pred -Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh-CCCceEEeCC
Confidence 222 69999987755566788999999988877789999999999999999999988887776554 3578888754
No 41
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.23 E-value=0.21 Score=60.42 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=89.4
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.++..+.+++=||+..|.+.. ++..+.++. ++ .....+++.|.. | .-.++-+++.+.+
T Consensus 395 ~~~~~vIg~VgRl~~~Kg~~~-LI~A~a~ll--k~---------~pdirLvIVGdG-~---~~eeLk~la~elg------ 452 (578)
T PRK15490 395 QDADTTIGGVFRFVGDKNPFA-WIDFAARYL--QH---------HPATRFVLVGDG-D---LRAEAQKRAEQLG------ 452 (578)
T ss_pred CCCCcEEEEEEEEehhcCHHH-HHHHHHHHH--hH---------CCCeEEEEEeCc-h---hHHHHHHHHHHcC------
Confidence 355667889999999999987 554443331 21 124578888853 1 1223444443333
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
+.+ +|.|+.. .+-...++.++||....|. .|..|.+-+-+|.-|++.|+|--|.+.|+.++. +|+|++..
T Consensus 453 --L~d--~V~FlG~--~~Dv~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG--~nG~LVp~ 522 (578)
T PRK15490 453 --ILE--RILFVGA--SRDVGYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIEG--VSGFILDD 522 (578)
T ss_pred --CCC--cEEECCC--hhhHHHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHcccC--CcEEEECC
Confidence 233 6888864 3333457899999998875 699999999999999999999999999877643 89999864
No 42
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=95.20 E-value=0.071 Score=58.64 Aligned_cols=123 Identities=20% Similarity=0.118 Sum_probs=78.2
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 768 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~ 768 (965)
...+++-|+...|.... ++..+.++.+- . ....+++.|...... .+-+++. +..+.
T Consensus 205 ~~i~~vgrl~~~K~~~~-li~a~~~l~~~---~--------~~~~l~i~G~g~~~~----~~~~~~~--------~~~~~ 260 (372)
T cd04949 205 HKIITVARLAPEKQLDQ-LIKAFAKVVKQ---V--------PDATLDIYGYGDEEE----KLKELIE--------ELGLE 260 (372)
T ss_pred CeEEEEEccCcccCHHH-HHHHHHHHHHh---C--------CCcEEEEEEeCchHH----HHHHHHH--------HcCCc
Confidence 35678889999998877 66665554321 2 134677777654332 2222221 11233
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc-ccccccccccccceEeec
Q 002111 769 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 769 ~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDG-anvEI~e~vg~eN~fiFG 843 (965)
+ .|.|.. |. +-...++..||+....|. .|+-|.+-+-+|..|++.|+|--| ...|+.+. .+|++++.
T Consensus 261 ~--~v~~~g-~~-~~~~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv~ 328 (372)
T cd04949 261 D--YVFLKG-YT-RDLDEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLVP 328 (372)
T ss_pred c--eEEEcC-CC-CCHHHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEeC
Confidence 3 455554 53 344567788999999987 599999999999999999999544 34554432 25666664
No 43
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.19 E-value=0.26 Score=54.48 Aligned_cols=131 Identities=15% Similarity=0.072 Sum_probs=85.9
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.++....+++-|+.+.|.+.+ ++..+..+.+- .+.. ....++++.|.. |. -+.+.+++.+..
T Consensus 191 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~~~~----~~~~~l~i~G~g-~~---~~~~~~~~~~~~------ 252 (374)
T TIGR03088 191 ADESVVVGTVGRLQAVKDQPT-LVRAFALLVRQ---LPEG----AERLRLVIVGDG-PA---RGACEQMVRAAG------ 252 (374)
T ss_pred CCCCeEEEEEecCCcccCHHH-HHHHHHHHHHh---Cccc----ccceEEEEecCC-ch---HHHHHHHHHHcC------
Confidence 346788889999999999987 66655544221 1111 114688888852 21 234444554332
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+.+ .|.|+ .+ ..-...++.+||+-...|. .|+.|.+-+=+|..|.+.|+|--|...|+.++. .++++|.
T Consensus 253 --~~~--~v~~~-g~-~~~~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~--~~g~~~~ 321 (374)
T TIGR03088 253 --LAH--LVWLP-GE-RDDVPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQHG--VTGALVP 321 (374)
T ss_pred --Ccc--eEEEc-CC-cCCHHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCC--CceEEeC
Confidence 222 34444 33 2333566799999887665 699999999999999999999888888776542 5666664
No 44
>PLN02949 transferase, transferring glycosyl groups
Probab=95.05 E-value=0.28 Score=57.79 Aligned_cols=134 Identities=16% Similarity=0.141 Sum_probs=85.9
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeec-CCCCcHH-HHHHHHHHHHHhhhhcCCcC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK-AFATYVQ-AKRIVKFITDVGATVNHDPE 766 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGK-A~P~y~~-aK~IIk~I~~va~~iN~Dp~ 766 (965)
.+.+.+=||...|++.+ ++..+.++.+-. +.. ..+..++++|. ..+.+.. -+++-+++.+.+
T Consensus 269 ~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~~----~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~-------- 332 (463)
T PLN02949 269 PYIISVAQFRPEKAHAL-QLEAFALALEKL---DAD----VPRPKLQFVGSCRNKEDEERLQKLKDRAKELG-------- 332 (463)
T ss_pred CEEEEEEeeeccCCHHH-HHHHHHHHHHhc---ccc----CCCcEEEEEeCCCCcccHHHHHHHHHHHHHcC--------
Confidence 44566779999999999 888777664311 111 11234555554 3444432 234444443322
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccc-cccccc-cccccceEee
Q 002111 767 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA-NVEIRQ-EVGEENFFLF 842 (965)
Q Consensus 767 i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGa-nvEI~e-~vg~eN~fiF 842 (965)
+.+ +|.|+.+-.-+--..++..||+-.+.|. .|.=|.+-+=+|.-|++.|++--|- ..||.. +.+++++|++
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~ 406 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA 406 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC
Confidence 344 6999988655555667888999987664 6999999999999999999986553 446643 3344566665
No 45
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=94.93 E-value=0.26 Score=53.65 Aligned_cols=128 Identities=17% Similarity=0.169 Sum_probs=85.7
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 002111 688 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 767 (965)
Q Consensus 688 slfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i 767 (965)
....+++=|+..+|.... ++..+.. |++. .....++++|.- | .-.++-+++.+.+ +
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~---l~~~--------~~~~~l~ivG~g-~---~~~~~~~~~~~~~--------~ 243 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFAR---LARR--------VPEVRLVIIGDG-P---LLAALEALARALG--------L 243 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHH---HHHh--------CCCeEEEEEeCc-h---HHHHHHHHHHHcC--------C
Confidence 345677889999998876 6554443 4321 124578888852 1 1123434443321 2
Q ss_pred CCcceEEEecCCChhhhhhhccccccccccCCC---c-cccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 768 GDLLKVIFVPDYNVSVAELLIPASELSQHISTA---G-MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 768 ~~~LKVVFlenYnVslAe~LipasDvs~nista---g-~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
.+ +|.|+....-.-...++.+||+-...|.. | .|+.|++-+=+|.=|++.|+|-.|.+.|+.++. .|+++|.
T Consensus 244 ~~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~--~~g~~~~ 319 (367)
T cd05844 244 GG--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDG--ETGLLVP 319 (367)
T ss_pred CC--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecC--CeeEEEC
Confidence 23 68898887655566778999997765543 2 589999999999999999999888888765432 6777774
No 46
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=94.60 E-value=0.16 Score=53.81 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=92.2
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|+..+|+... ++..+.+ +++ . ....++++.|... ..+.+.+++....
T Consensus 198 ~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~---~~~-~-------~~~~~l~i~G~~~----~~~~~~~~~~~~~----- 256 (374)
T cd03817 198 IPEDEPVLLYVGRLAKEKNIDF-LIRAFAR---LLK-E-------EPDVKLVIVGDGP----EREELEELARELG----- 256 (374)
T ss_pred CCCCCeEEEEEeeeecccCHHH-HHHHHHH---HHH-h-------CCCeEEEEEeCCc----hHHHHHHHHHHcC-----
Confidence 3556778889999999998766 5554443 432 1 1246788888642 2234444443222
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
..+ +|.|++...=+-...++..||+-...|. .|..|++-+-+|.-|++.|+|-.|+.-|+.++. ++++++.
T Consensus 257 ---~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~--~~g~~~~ 327 (374)
T cd03817 257 ---LAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADG--ENGFLFP 327 (374)
T ss_pred ---CCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecC--ceeEEeC
Confidence 122 6899988766666778889999887664 578888888899999999999999988877554 7888886
Q ss_pred cc
Q 002111 844 AR 845 (965)
Q Consensus 844 ~~ 845 (965)
..
T Consensus 328 ~~ 329 (374)
T cd03817 328 PG 329 (374)
T ss_pred CC
Confidence 54
No 47
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=94.58 E-value=0.077 Score=58.01 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=82.2
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCC
Q 002111 690 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 769 (965)
Q Consensus 690 fdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~ 769 (965)
+.+++-|+..+|++.+ ++..+.+ + |..+++.|.-.. ...+-+ . ..+
T Consensus 197 ~il~~G~~~~~K~~~~-li~a~~~---~-------------~~~l~ivG~g~~----~~~l~~---~----------~~~ 242 (351)
T cd03804 197 YYLSVGRLVPYKRIDL-AIEAFNK---L-------------GKRLVVIGDGPE----LDRLRA---K----------AGP 242 (351)
T ss_pred EEEEEEcCccccChHH-HHHHHHH---C-------------CCcEEEEECChh----HHHHHh---h----------cCC
Confidence 4678999999999887 6554322 1 345777775321 122221 1 112
Q ss_pred cceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 770 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 770 ~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+|.|++.-+=+-...++.+||+....|. |..|++.+-+|..|++.|+|-.|...|+.++. ++++++-
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~--~~G~~~~ 309 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVIDG--VTGILFE 309 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeCC--CCEEEeC
Confidence 6999998766667789999999997766 99999999999999999999999988876543 6788774
No 48
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=94.56 E-value=0.014 Score=57.01 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHhHhcCCcEEEEEehhhhhhhhh
Q 002111 115 KAFFATAQSVRDSLII--NWNSTYEYYERLNVKQAYYLSMEFLQGRAL 160 (965)
Q Consensus 115 ~~y~Ala~~vRD~l~~--~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L 160 (965)
..|..+....+++|.. .|..+ ........|+||||||+++.+|
T Consensus 74 ~~~~~v~~~f~~Ym~~~~~W~~~---~~~~~~~~IAYFSmEfGlhesL 118 (118)
T PF11897_consen 74 ARYDRVYARFEEYMSQKPTWFQE---PGDTPNPPIAYFSMEFGLHESL 118 (118)
T ss_pred HHHHHHHHHHHHHHcCCCccccC---CCCCCCCCEEEEcccccccccC
Confidence 3444555555555543 35554 2333578999999999988765
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.56 E-value=0.28 Score=51.88 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=84.3
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
+++.+..+++-|++.+|...+ ++..+. ++.+ . .+.++++.|...... .+.+++...
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~---~l~~-~--------~~~~l~i~G~~~~~~----~~~~~~~~~------- 272 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAA---LLKD-R--------PDIRFLIVGDGPEKE----ELKELAKAL------- 272 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHH---HHhh-c--------CCeEEEEeCCcccHH----HHHHHHHHc-------
Confidence 456788889999999998877 665544 4443 1 145788888643322 222222111
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCcc---ccCCCccchhhcccceEeeecccccccccccccccceEe
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM---EASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 841 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~---EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fi 841 (965)
... .|.|++..+-+-...++..||+-...+.... .++++.-+-++.-|++.|+|-.|..-|+..+. +++++
T Consensus 273 -~~~---~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~~ 346 (394)
T cd03794 273 -GLD---NVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGLV 346 (394)
T ss_pred -CCC---cEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC--CcceE
Confidence 111 5999986555566678899999988776553 33344457899999999999988887766443 55666
Q ss_pred ec
Q 002111 842 FG 843 (965)
Q Consensus 842 FG 843 (965)
|-
T Consensus 347 ~~ 348 (394)
T cd03794 347 VP 348 (394)
T ss_pred eC
Confidence 54
No 50
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=94.55 E-value=0.13 Score=55.44 Aligned_cols=133 Identities=19% Similarity=0.187 Sum_probs=94.5
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
..++....+++-|+...|.+.. ++..+.. +++ . ..+.++++.|...+.....+.+.+++.+.+
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~---l~~-~-------~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~----- 243 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEV-FIEALAR---LKK-D-------DPDVHLLIVGDAQGRRFYYAELLELIKRLG----- 243 (355)
T ss_pred CCCCceEEEEeeccccccCHHH-HHHHHHH---HHh-c-------CCCeEEEEEECCcccchHHHHHHHHHHHcC-----
Confidence 4567778889999999999987 6655444 443 1 126789999987766555556666654433
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+.+ +|.|++- .+--..++.+||+-...|. -.|..|++-+=+|.-|++.|+|-.|...|+..+. .+++++-
T Consensus 244 ---~~~--~v~~~g~--~~~~~~~l~~ad~~i~ps~-~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 313 (355)
T cd03819 244 ---LQD--RVTFVGH--CSDMPAAYALADIVVSAST-EPEAFGRTAVEAQAMGRPVIASDHGGARETVRPG--ETGLLVP 313 (355)
T ss_pred ---Ccc--eEEEcCC--cccHHHHHHhCCEEEecCC-CCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCC--CceEEeC
Confidence 122 5777766 3333456788999887663 3689999999999999999999888888876543 4777774
No 51
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=94.51 E-value=0.23 Score=51.61 Aligned_cols=131 Identities=16% Similarity=0.134 Sum_probs=87.9
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.++....+++-|+..+|.-.. ++.. +..++.. ....++++.|. . .....+.+++...
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~-~i~~---~~~~~~~--------~~~~~l~i~G~-~---~~~~~~~~~~~~~------- 252 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDL-LLEA---LAKLRKE--------YPDVRLVIVGD-G---PLREELEALAAEL------- 252 (374)
T ss_pred cCCCeEEEEecchhhhcCHHH-HHHH---HHHHhhh--------cCCeEEEEEeC-c---HHHHHHHHHHHHh-------
Confidence 456778888999998887555 4443 3334321 12357888881 1 1222222333221
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
...+ +|.|++...-.-...++..||+-.+.++. |+.|++-+-++..|++.|+|-.|+.-|+.+. ..+++++..
T Consensus 253 -~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~~--~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~~~ 325 (374)
T cd03801 253 -GLGD--RVTFLGFVPDEDLPALYAAADVFVLPSLY--EGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLVPP 325 (374)
T ss_pred -CCCc--ceEEEeccChhhHHHHHHhcCEEEecchh--ccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEeCC
Confidence 2223 68888887656666777889999887777 9999999999999999999988888887654 367777754
Q ss_pred c
Q 002111 845 R 845 (965)
Q Consensus 845 ~ 845 (965)
.
T Consensus 326 ~ 326 (374)
T cd03801 326 G 326 (374)
T ss_pred C
Confidence 3
No 52
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.48 E-value=0.09 Score=56.34 Aligned_cols=131 Identities=18% Similarity=0.116 Sum_probs=90.6
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
++....+++-|+..+|...+ ++..+.+ +++ . ..+.++++.|...+. ..+-+++....
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~---l~~-~-------~~~~~l~i~G~~~~~----~~~~~~~~~~~------- 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALAL---LKD-R-------GIDFRLDIVGDGPLR----DELEALIAELG------- 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHH---Hhh-c-------CCCeEEEEEECCccH----HHHHHHHHHcC-------
Confidence 45566788899999998877 7766654 332 1 124678888865443 23333333321
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCC----ccccCCCccchhhcccceEeeecccccccccccccccceEe
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTA----GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 841 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nista----g~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fi 841 (965)
..+ .|.|.....-.-...++..||+-...|.. ..|+.|++-+-+|.-|++.|+|-.|+.-|+.+.. .|+++
T Consensus 234 -~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~--~~g~~ 308 (355)
T cd03799 234 -LED--RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDG--ETGLL 308 (355)
T ss_pred -CCC--eEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCC--CceEE
Confidence 122 58888877656667788899998887665 2488899999999999999999888887776543 57888
Q ss_pred ecc
Q 002111 842 FGA 844 (965)
Q Consensus 842 FG~ 844 (965)
+..
T Consensus 309 ~~~ 311 (355)
T cd03799 309 VPP 311 (355)
T ss_pred eCC
Confidence 754
No 53
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=94.43 E-value=0.073 Score=55.31 Aligned_cols=130 Identities=17% Similarity=0.102 Sum_probs=88.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
.+++....+++-|+.+.|+..+ ++..+. ++++ . ..+.++++.|....... +.+++....
T Consensus 185 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~---~l~~-~-------~~~~~l~i~G~~~~~~~----~~~~~~~~~----- 243 (353)
T cd03811 185 IPPDGPVILAVGRLSPQKGFDT-LIRAFA---LLRK-E-------GPDARLVILGDGPLREE----LEALAKELG----- 243 (353)
T ss_pred CCCCceEEEEEecchhhcChHH-HHHHHH---Hhhh-c-------CCCceEEEEcCCccHHH----HHHHHHhcC-----
Confidence 3556788889999999998776 554443 3432 1 12567888886543222 223333322
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
..+ +|.|+.. ++-...++..||+....|.. |..|++-+-+|.-|++.|+|-.|..-|+.++. .+++++.
T Consensus 244 ---~~~--~v~~~g~--~~~~~~~~~~~d~~i~ps~~--e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 312 (353)
T cd03811 244 ---LAD--RVHFLGF--QSNPYPYLKAADLFVLSSRY--EGFPNVLLEAMALGTPVVATDCPGPREILEDG--ENGLLVP 312 (353)
T ss_pred ---CCc--cEEEecc--cCCHHHHHHhCCEEEeCccc--CCCCcHHHHHHHhCCCEEEcCCCChHHHhcCC--CceEEEC
Confidence 222 4666665 33345688999999887654 99999999999999999999889888766543 6888886
Q ss_pred cc
Q 002111 844 AR 845 (965)
Q Consensus 844 ~~ 845 (965)
..
T Consensus 313 ~~ 314 (353)
T cd03811 313 VG 314 (353)
T ss_pred CC
Confidence 54
No 54
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=94.14 E-value=0.28 Score=55.46 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=89.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCC-CCcHHHHHHHHHHHHHhhhhc
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-ATYVQAKRIVKFITDVGATVN 762 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~-P~y~~aK~IIk~I~~va~~iN 762 (965)
++++....+++-|+..+|.... ++..+.+ +++-. ....+++.|... +.........+.+..+++..
T Consensus 189 ~~~~~~~il~~Grl~~~Kg~~~-Li~A~~~---l~~~~--------p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l- 255 (380)
T PRK15484 189 ISPDETVLLYAGRISPDKGILL-LMQAFEK---LATAH--------SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRI- 255 (380)
T ss_pred CCCCCeEEEEeccCccccCHHH-HHHHHHH---HHHhC--------CCeEEEEEeCCccccccchhHHHHHHHHHHHhc-
Confidence 3456677888999999999887 6655544 43201 134677766532 22212223344444444322
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 763 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 763 ~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
++ +|.|+..-.-+-...++.+||+....|.. .|.-|..-+=+|.-|++.|+|--|...|+.++. .|+|++
T Consensus 256 -----~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~~-~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~--~~G~~l 325 (380)
T PRK15484 256 -----GD--RCIMLGGQPPEKMHNYYPLADLVVVPSQV-EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEG--ITGYHL 325 (380)
T ss_pred -----CC--cEEEeCCCCHHHHHHHHHhCCEEEeCCCC-ccccccHHHHHHHcCCCEEEeCCCCcHhhcccC--CceEEE
Confidence 12 68888765545556778999999875542 388888888999999999999999999877553 677754
No 55
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=93.59 E-value=1 Score=53.80 Aligned_cols=122 Identities=19% Similarity=0.120 Sum_probs=83.3
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 768 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~ 768 (965)
...+++-|+.+.|+... ++..+.+. ++- ....++++.|... . -..+-++|.... +.
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l---~~~--------~p~~~l~i~G~G~---~-~~~l~~~i~~~~--------l~ 375 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKA---KKS--------VPELTFDIYGEGG---E-KQKLQKIINENQ--------AQ 375 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHH---Hhh--------CCCeEEEEEECch---h-HHHHHHHHHHcC--------CC
Confidence 45778899999999887 66665543 320 1245666666421 1 123334443321 23
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc-ccccccccccccceEeec
Q 002111 769 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 769 ~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDG-anvEI~e~vg~eN~fiFG 843 (965)
+ +|.|+. + +.+++ ++..||+....|. .|+-|-+-|=+|..|++.|+|--| ...|+.+.. +|++++-
T Consensus 376 ~--~V~f~G-~-~~~~~-~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g--~nG~lv~ 442 (500)
T TIGR02918 376 D--YIHLKG-H-RNLSE-VYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDN--KNGYLIP 442 (500)
T ss_pred C--eEEEcC-C-CCHHH-HHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccCC--CCEEEEe
Confidence 3 677777 4 46665 5689999998886 799999999999999999999643 677877554 8999885
No 56
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=93.30 E-value=0.92 Score=48.88 Aligned_cols=124 Identities=12% Similarity=-0.022 Sum_probs=82.3
Q ss_pred CCCCcceecccccccc--cccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhh
Q 002111 684 VSPDAMFDIQVKRIHE--YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV 761 (965)
Q Consensus 684 ldpdslfdvq~KR~he--YKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~i 761 (965)
++++.....+..|... +|...+ ++..+.. +++ . . ..+.++++.|...+....
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~---l~~-~--~----~~~~~~~i~G~~~~~~~~--------------- 240 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDE-LIEALKR---LAE-R--W----KDDIELVVFGASDPEIPP--------------- 240 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHH-HHHHHHH---hhh-c--c----CCCeEEEEeCCCchhhhc---------------
Confidence 3455555566666665 787766 5555443 332 0 0 125688888876543221
Q ss_pred cCCcCCCCcceEEEecCCC-hhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceE
Q 002111 762 NHDPEIGDLLKVIFVPDYN-VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 840 (965)
Q Consensus 762 N~Dp~i~~~LKVVFlenYn-VslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~f 840 (965)
...+ +|.|+.... -..-..++.+||+-...|. .|+.|.+-+-+|..|++.|++-.|...|+.... +++|
T Consensus 241 ----~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~--~~g~ 310 (365)
T cd03825 241 ----DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDHG--VTGY 310 (365)
T ss_pred ----cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeCC--CceE
Confidence 1122 578877765 4445567889999888665 699999999999999999999888888866432 4666
Q ss_pred eec
Q 002111 841 LFG 843 (965)
Q Consensus 841 iFG 843 (965)
++.
T Consensus 311 ~~~ 313 (365)
T cd03825 311 LAK 313 (365)
T ss_pred EeC
Confidence 554
No 57
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=93.28 E-value=0.12 Score=55.59 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=26.1
Q ss_pred CCCCCchhchhhhHhhhhccCCCeEEEeecc
Q 002111 196 LGNGGLGRLASCFLDSMATLNYPAWGYGLRY 226 (965)
Q Consensus 196 LGnGGLGrLAacfLdS~AtL~~P~~GyGLrY 226 (965)
.-.||||..++..-+.|+.+|..+.-+--+|
T Consensus 13 ~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 13 AKVGGLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp B-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred cccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 5699999999999999999999998888877
No 58
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=93.14 E-value=0.37 Score=51.96 Aligned_cols=120 Identities=17% Similarity=0.078 Sum_probs=82.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
..++....+++-|+..+|...+ ++..+.+ |++. ....++++.|.... . ..+-+++.+.
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~---l~~~--------~~~~~l~ivG~g~~-~---~~~~~~~~~~------ 245 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEF-LIEIFAE---LLKK--------NPNAKLLLVGDGEL-E---EEIKKKVKEL------ 245 (358)
T ss_pred CCCCCEEEEEEeccccccChHH-HHHHHHH---HHHh--------CCCeEEEEEeCCch-H---HHHHHHHHhc------
Confidence 4567888999999999999887 6655444 4331 12457888885432 1 2222222211
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 833 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~ 833 (965)
.+.+ +|.|+.- .+-...++..||+-.+.|. .|..|.+-|-+|.-|++.|+|--|..-|+.+.
T Consensus 246 --~~~~--~v~~~g~--~~~~~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 246 --GLED--KVIFLGV--RNDVPELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred --CCCC--cEEEecc--cCCHHHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc
Confidence 2233 5777764 4444567899999998886 49999999999999999999988887776544
No 59
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=93.00 E-value=0.7 Score=53.33 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=91.9
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc-H-HHHHHHHHHHHHhhhhcCC
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-V-QAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y-~-~aK~IIk~I~~va~~iN~D 764 (965)
+....+++=||...|+..+ ++..+..+.+- .|... ..+..++++|.....+ . ..+++-+++.+..
T Consensus 236 ~~~~il~vgr~~~~K~~~~-li~A~~~l~~~---~~~~~---~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~------ 302 (419)
T cd03806 236 RENQILSIAQFRPEKNHPL-QLRAFAKLLKR---LPEEI---KEKIKLVLIGSCRNEDDEKRVEDLKLLAKELG------ 302 (419)
T ss_pred CCcEEEEEEeecCCCCHHH-HHHHHHHHHHh---Ccccc---cCceEEEEEcCCCCcccHHHHHHHHHHHHHhC------
Confidence 3457778889999999998 77766655432 11100 0134666666543333 2 2233333333322
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc-ccccccccc-cccceEee
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEV-GEENFFLF 842 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDG-anvEI~e~v-g~eN~fiF 842 (965)
+.+ +|.|+.+-.-+--..++..||+..+.|.. |.=|-+-.-+|.-|++.|++-.| ...||.+.. +++++|++
T Consensus 303 --l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~~--E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 303 --LED--KVEFVVNAPFEELLEELSTASIGLHTMWN--EHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA 376 (419)
T ss_pred --CCC--eEEEecCCCHHHHHHHHHhCeEEEECCcc--CCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe
Confidence 334 79999876556666788999999987764 88899999999999999988654 445665411 35788987
Q ss_pred ccchhhh
Q 002111 843 GARAHEI 849 (965)
Q Consensus 843 G~~~~ev 849 (965)
. +.+++
T Consensus 377 ~-d~~~l 382 (419)
T cd03806 377 S-TAEEY 382 (419)
T ss_pred C-CHHHH
Confidence 4 44443
No 60
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=92.95 E-value=0.67 Score=53.85 Aligned_cols=124 Identities=14% Similarity=0.110 Sum_probs=82.3
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
.|+..+.+++-|+..+|...+ ++..+ +. . ....++++|. .|.. ..+-+++ + .
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~-li~a~------~~-~--------~~~~l~ivG~-G~~~---~~l~~~~----~---~- 311 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDF-LKRVM------ER-L--------PGARLAFVGD-GPYR---EELEKMF----A---G- 311 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHH-HHHHH------Hh-C--------CCcEEEEEeC-ChHH---HHHHHHh----c---c-
Confidence 456778899999999998765 43322 11 1 1346888885 2221 2222222 1 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc-ccccceEeec
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE-VGEENFFLFG 843 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~-vg~eN~fiFG 843 (965)
.+|.|+.--.=.-...++.+||+-..-|. .|..|..-+=+|.-|.+.|+|-.|...|+.++ ...+|+++|.
T Consensus 312 ------~~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 312 ------TPTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred ------CCeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 15778754222345567899999887664 68888888999999999999988888887654 1247889986
Q ss_pred c
Q 002111 844 A 844 (965)
Q Consensus 844 ~ 844 (965)
.
T Consensus 384 ~ 384 (465)
T PLN02871 384 P 384 (465)
T ss_pred C
Confidence 3
No 61
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.57 E-value=1.5 Score=46.57 Aligned_cols=121 Identities=17% Similarity=0.133 Sum_probs=81.8
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
++....+++-|+..+|...+ ++..+. ++++ . .+..+++.|.. |.. .-++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~---~l~~-~--------~~~~l~i~G~~-~~~----~~~~------~------ 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADL---PLRR-R--------PPVRLVIVGDG-PAR----ARLE------A------ 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHH---Hhhh-c--------CCceEEEEeCC-chH----HHHh------c------
Confidence 44567788889999998766 554443 3443 1 14578888852 111 1112 1
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
..+ +|.|+.-....-...++.+||+-...+. .|..|..-+=+|.-|++.|++-.|+..|+.++. .++++|.
T Consensus 245 -~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~--~~g~~~~ 315 (364)
T cd03814 245 -RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTDG--ENGLLVE 315 (364)
T ss_pred -cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCC--cceEEcC
Confidence 112 6888887666777788999999876554 578888889999999999999888877766442 5666654
No 62
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=91.76 E-value=1.7 Score=45.24 Aligned_cols=125 Identities=14% Similarity=0.054 Sum_probs=77.3
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 766 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~ 766 (965)
+....+++=|+...|.... ++..+.. +++ . ....++++.|....... +-+++...+
T Consensus 177 ~~~~i~~~g~~~~~K~~~~-l~~~~~~---l~~-~-------~~~~~l~i~G~~~~~~~----~~~~~~~~~-------- 232 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDL-LIEAWAK---IAK-K-------HPDWKLRIVGDGPEREA----LEALIKELG-------- 232 (348)
T ss_pred CCcEEEEEEeeccccCHHH-HHHHHHH---HHh-c-------CCCeEEEEEeCCCCHHH----HHHHHHHcC--------
Confidence 3455678889999998877 6655444 432 0 12457888886543221 222222221
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccc-cccccccccceEeec
Q 002111 767 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV-EIRQEVGEENFFLFG 843 (965)
Q Consensus 767 i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanv-EI~e~vg~eN~fiFG 843 (965)
+.+ +|.|... .+-...++..||+-...|.. |..|++-+-+|..|++.|+|-.|... |+.+. ++++++|-
T Consensus 233 ~~~--~v~~~g~--~~~~~~~~~~ad~~i~ps~~--e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~~~ 302 (348)
T cd03820 233 LED--RVILLGF--TKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLLVP 302 (348)
T ss_pred CCC--eEEEcCC--cchHHHHHHhCCEEEeCccc--cccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEEeC
Confidence 222 5666665 45556778889998876654 88999999999999999998544433 33321 14666663
No 63
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=91.75 E-value=0.58 Score=49.05 Aligned_cols=129 Identities=16% Similarity=0.093 Sum_probs=87.2
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
+.+....+++-|+...|.... ++..+.+ +.+ . ..+..+++.|...+. +.+.+++.+
T Consensus 199 ~~~~~~i~~~g~~~~~k~~~~-li~~~~~---~~~-~-------~~~~~l~i~g~~~~~----~~~~~~~~~-------- 254 (377)
T cd03798 199 PEDKKVILFVGRLVPRKGIDY-LIEALAR---LLK-K-------RPDVHLVIVGDGPLR----EALEALAAE-------- 254 (377)
T ss_pred CCCceEEEEeccCccccCHHH-HHHHHHH---HHh-c-------CCCeEEEEEcCCcch----HHHHHHHHh--------
Confidence 456678889999999888766 6554443 432 1 125688898875432 223333321
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
....+ .|.|++..+=.-...++..||+....|.. |+.|++-+-++.-|++.|++-.|+..|+.++. .++++|-
T Consensus 255 ~~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~~--~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~--~~g~~~~ 327 (377)
T cd03798 255 LGLED--RVTFLGAVPHEEVPAYYAAADVFVLPSLR--EGFGLVLLEAMACGLPVVATDVGGIPEIITDG--ENGLLVP 327 (377)
T ss_pred cCCcc--eEEEeCCCCHHHHHHHHHhcCeeecchhh--ccCChHHHHHHhcCCCEEEecCCChHHHhcCC--cceeEEC
Confidence 22223 57787765545555778889999887766 99999999999999999999888888766443 3445553
No 64
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=90.98 E-value=2.2 Score=46.07 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=75.2
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCC
Q 002111 690 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 769 (965)
Q Consensus 690 fdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~ 769 (965)
+.+++=|+.++|...+ ++..+. ++.. ...+++.|.........+.+.+. . ...+
T Consensus 195 ~i~~~G~~~~~Kg~~~-li~a~~---~l~~-----------~~~l~ivG~~~~~~~~~~~~~~~----~-------~~~~ 248 (363)
T cd04955 195 YYLLVGRIVPENNIDD-LIEAFS---KSNS-----------GKKLVIVGNADHNTPYGKLLKEK----A-------AADP 248 (363)
T ss_pred EEEEEecccccCCHHH-HHHHHH---hhcc-----------CceEEEEcCCCCcchHHHHHHHH----h-------CCCC
Confidence 4568899999999887 655433 2221 24678888765444333333321 1 1122
Q ss_pred cceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 770 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 770 ~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
+|.|+.-..=.-...++..||+..-.|. ..|..|.+-+=+|.-|++.|+|-.|...|+.+. ++++|
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~-~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~----~g~~~ 314 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH-SVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD----KAIYF 314 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc-cCCCCChHHHHHHHcCCCEEEecCCccceeecC----CeeEe
Confidence 6888875333333345566677654443 348888888999999999999988888776532 55555
No 65
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=90.92 E-value=1 Score=47.64 Aligned_cols=126 Identities=13% Similarity=0.018 Sum_probs=86.5
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
.+....+++-|+...|...+ ++..+.. +++ ....+++.|.....+..-+.. +
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~---l~~----------~~~~l~i~G~~~~~~~~~~~~-------~------- 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKR---LPR----------GDIELVIVGNGLELEEESYEL-------E------- 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHH---HHh----------cCcEEEEEcCchhhhHHHHhh-------c-------
Confidence 34566778889999998877 6655444 331 134677888765554433222 1
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeeccc
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAR 845 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~ 845 (965)
..+ .|.|+..+.-.....++.+||+....|. ..|..|.+-+-+|.-|++.|+|--|..-|+.+.. .++++|...
T Consensus 241 -~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~~~ 314 (359)
T cd03823 241 -GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRDG--VNGLLFPPG 314 (359)
T ss_pred -CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCC--CcEEEECCC
Confidence 112 6889888876777778999999886543 3577888888899999999999777777765432 467777643
No 66
>PRK10307 putative glycosyl transferase; Provisional
Probab=90.38 E-value=3 Score=47.19 Aligned_cols=128 Identities=13% Similarity=0.137 Sum_probs=78.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|+.++|.+.. ++..+. ++++ . .+..+++.|.- |. -..+.+++...+
T Consensus 225 ~~~~~~~i~~~G~l~~~kg~~~-li~a~~---~l~~-~--------~~~~l~ivG~g-~~---~~~l~~~~~~~~----- 282 (412)
T PRK10307 225 LPDGKKIVLYSGNIGEKQGLEL-VIDAAR---RLRD-R--------PDLIFVICGQG-GG---KARLEKMAQCRG----- 282 (412)
T ss_pred CCCCCEEEEEcCccccccCHHH-HHHHHH---Hhcc-C--------CCeEEEEECCC-hh---HHHHHHHHHHcC-----
Confidence 4567788889999999997776 555443 3432 1 13678888842 21 123333443222
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCc-c---chhhcccceEeeecccccccccccccccce
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTS-N---MKFAMNGCILIGTLDGANVEIRQEVGEENF 839 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTS-n---MKfamNGal~lgTlDGanvEI~e~vg~eN~ 839 (965)
+. +|.|+.-..-+-...++.+||+-...|+. |+.|.+ . .-+|..|++.|+|-.|-. ++.+.+. +|+
T Consensus 283 ---l~---~v~f~G~~~~~~~~~~~~~aDi~v~ps~~--e~~~~~~p~kl~eama~G~PVi~s~~~g~-~~~~~i~-~~G 352 (412)
T PRK10307 283 ---LP---NVHFLPLQPYDRLPALLKMADCHLLPQKA--GAADLVLPSKLTNMLASGRNVVATAEPGT-ELGQLVE-GIG 352 (412)
T ss_pred ---CC---ceEEeCCCCHHHHHHHHHhcCEeEEeecc--CcccccCcHHHHHHHHcCCCEEEEeCCCc-hHHHHHh-CCc
Confidence 11 48898765666677788999998876653 555432 2 346889999999966532 2222222 577
Q ss_pred Eeec
Q 002111 840 FLFG 843 (965)
Q Consensus 840 fiFG 843 (965)
++|.
T Consensus 353 ~~~~ 356 (412)
T PRK10307 353 VCVE 356 (412)
T ss_pred EEeC
Confidence 7774
No 67
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=90.13 E-value=0.8 Score=56.88 Aligned_cols=128 Identities=18% Similarity=0.219 Sum_probs=88.2
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 685 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 685 dpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
..+.+..+++-|+++.|.|.+ ++..+..+.+ + . ....+++.|.. | .-..+-+++.+.+
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~--------p~~~LvIvG~G-~---~~~~L~~l~~~lg------ 571 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-H--------PKVRFIMVGGG-P---LLESVREFAQRLG------ 571 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-C--------cCeEEEEEccC-c---chHHHHHHHHHcC------
Confidence 345778889999999999997 6665544421 1 1 13567777753 1 1233444444332
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
+.+ +|.|+. |.=.+ ..++.+||+....|. .|..|.+=+=+|..|++.|+|--|...||.++. .|+|++..
T Consensus 572 --L~~--~V~flG-~~~dv-~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg--~~GlLv~~ 641 (694)
T PRK15179 572 --MGE--RILFTG-LSRRV-GYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEG--VTGLTLPA 641 (694)
T ss_pred --CCC--cEEEcC-CcchH-HHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccCC--CCEEEeCC
Confidence 333 566655 43234 467899999998885 699999999999999999999888888876543 68888853
No 68
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=90.09 E-value=0.98 Score=48.29 Aligned_cols=122 Identities=13% Similarity=0.047 Sum_probs=82.1
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCC
Q 002111 690 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 769 (965)
Q Consensus 690 fdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~ 769 (965)
..+++=|+...|++.+ ++... +. ....+++.|.........+. +..... +.+
T Consensus 173 ~i~~~Gr~~~~Kg~~~-li~~~------~~----------~~~~l~i~G~~~~~~~~~~~----~~~~~~-------~~~ 224 (335)
T cd03802 173 YLLFLGRISPEKGPHL-AIRAA------RR----------AGIPLKLAGPVSDPDYFYRE----IAPELL-------DGP 224 (335)
T ss_pred EEEEEEeeccccCHHH-HHHHH------Hh----------cCCeEEEEeCCCCHHHHHHH----HHHhcc-------cCC
Confidence 4678889999999987 55432 11 12467788876443332222 211110 223
Q ss_pred cceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 770 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 770 ~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
+|.|+..-+=.-...++.++|+....|+ ..|..|.+-+=+|.-|++.|+|--|...|+.+.. .|++++..
T Consensus 225 --~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~--~~g~l~~~ 294 (335)
T cd03802 225 --DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDG--VTGFLVDS 294 (335)
T ss_pred --cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeCC--CcEEEeCC
Confidence 6888876443334467899999997654 4689999999999999999999889888876543 58888854
No 69
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=89.28 E-value=1.8 Score=49.84 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=89.3
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
++..+.+.+-|+++.|.... ++..+.++.+... .... .....+++.|.. | .-..+.+++.+.+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~~----~~~i~l~ivG~G-~---~~~~l~~~~~~~~------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGPK----LPKLLCIITGKG-P---LKEKYLERIKELK------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-cccc----CCCEEEEEEecC-c---cHHHHHHHHHHcC-------
Confidence 34456667889999999887 7777666544311 0000 112678888863 2 2344555554332
Q ss_pred CCCCcceEEEecCC-ChhhhhhhccccccccccCCC-ccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 766 EIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTA-GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 766 ~i~~~LKVVFlenY-nVslAe~LipasDvs~nista-g~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+. .++|+..| .-+-...++.+||+..-.+.. ..|.-|..-+=+|.=|.+.|+|--|...|+.++. +|+++++
T Consensus 293 -l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~--~~G~lv~ 366 (415)
T cd03816 293 -LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHG--ENGLVFG 366 (415)
T ss_pred -CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCC--CCEEEEC
Confidence 22 38888765 556666799999998621111 1133455567788999999999888888887654 7999996
Q ss_pred cchhhhh
Q 002111 844 ARAHEIA 850 (965)
Q Consensus 844 ~~~~ev~ 850 (965)
+.++++
T Consensus 367 -d~~~la 372 (415)
T cd03816 367 -DSEELA 372 (415)
T ss_pred -CHHHHH
Confidence 555554
No 70
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=87.34 E-value=4.9 Score=46.10 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=79.0
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 002111 688 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 767 (965)
Q Consensus 688 slfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i 767 (965)
....+.+-|+...|+..+ ++..+.+ +++..|+ ....+++.|... .-..+.+++.... .
T Consensus 230 ~~~il~~Grl~~~Kg~~~-li~a~~~---l~~~~p~------~~l~~~iiG~g~----~~~~l~~~~~~~~--------~ 287 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDL-IIKALAA---LAKARPS------IKIKWTHIGGGP----LEDTLKELAESKP--------E 287 (407)
T ss_pred CEEEEEeeccccccCHHH-HHHHHHH---HHHhCCC------ceEEEEEEeCch----HHHHHHHHHHhcC--------C
Confidence 456788999999999886 6655554 4331211 123455555422 1223333433111 1
Q ss_pred CCcceEEEecCCC-hhhhhhhcc-ccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 768 GDLLKVIFVPDYN-VSVAELLIP-ASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 768 ~~~LKVVFlenYn-VslAe~Lip-asDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
.+ +|.|+.-.. -.+.+.+-. .+|+--+.| ..|+-|.+-|-+|.-|.+.|+|--|...|+.++. +|++++-
T Consensus 288 ~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S--~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~--~~G~l~~ 359 (407)
T cd04946 288 NI--SVNFTGELSNSEVYKLYKENPVDVFVNLS--ESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNG--GNGLLLS 359 (407)
T ss_pred Cc--eEEEecCCChHHHHHHHhhcCCCEEEeCC--ccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCC--CcEEEeC
Confidence 22 677765433 234444432 467766555 4788899999999999999999889888876543 5888875
No 71
>PHA01630 putative group 1 glycosyl transferase
Probab=85.62 E-value=3.5 Score=46.61 Aligned_cols=118 Identities=9% Similarity=-0.012 Sum_probs=76.8
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 002111 688 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 767 (965)
Q Consensus 688 slfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i 767 (965)
.+..++++|++++|...+ ++..+.+ +++ . .....+++.|.. +. ..++. + +
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~---l~~-~-------~~~~~llivG~~-~~---~~~l~----------~----~ 191 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHE---LQN-E-------GYDFYFLIKSSN-ML---DPRLF----------G----L 191 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHH---HHh-h-------CCCEEEEEEeCc-cc---chhhc----------c----c
Confidence 345678999999998876 6554433 432 1 113466666721 11 11110 0 1
Q ss_pred CCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 768 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 768 ~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
.+ ..-+++ -+--..++.+||+....|+ .|+-|..-.=+|.-|++.|+|-.|.+-|+.++ ++|+|++..
T Consensus 192 ~~--~~~~v~---~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~~ 259 (331)
T PHA01630 192 NG--VKTPLP---DDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIKS 259 (331)
T ss_pred cc--eeccCC---HHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEeee
Confidence 11 011222 2334557899999999988 49999999999999999999999998887654 379998854
No 72
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=83.87 E-value=22 Score=41.97 Aligned_cols=132 Identities=12% Similarity=-0.006 Sum_probs=80.1
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc-HHHHHHHHHHHHHhhhhcCC
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y-~~aK~IIk~I~~va~~iN~D 764 (965)
++..+++++-|+...|...+ ++..+.++ ++..|.-+ ..++++..|-..-++ ..-.++.+.|.+.+..||..
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~l---l~~~p~~~----~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~ 333 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERL---LERYPEWR----GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGK 333 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHH---HHhChhhc----CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhc
Confidence 46677889999999999887 66665554 32133311 124555554433222 22345666666666656532
Q ss_pred cCCCCcceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccce-----Eeeeccccc
Q 002111 765 PEIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI-----LIGTLDGAN 827 (965)
Q Consensus 765 p~i~~~LKVVFlenY-nVslAe~LipasDvs~nistag~EASGTSnMKfamNGal-----~lgTlDGan 827 (965)
-...+.-.|+|+..+ +-+-...++.+||+-...|+. |+=|..-+-+|.=|++ .+|+.-|+-
T Consensus 334 ~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~--Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 334 FGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLR--DGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred cCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccc--cccCcccceeEEEecCCCceEEEeccccch
Confidence 111112358887643 555556678999999988874 7777777777777775 555555543
No 73
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=76.90 E-value=6.5 Score=42.33 Aligned_cols=125 Identities=16% Similarity=0.139 Sum_probs=81.9
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++..+.+++=|+...|...+ ++..+. ++++. ..+.++++.|. .|. .+.+.+++....
T Consensus 184 ~~~~~~~~l~~g~~~~~kg~~~-li~a~~---~l~~~--------~~~~~l~i~G~-g~~---~~~~~~~~~~~~----- 242 (360)
T cd04951 184 VKNDTFVILAVGRLVEAKDYPN-LLKAFA---KLLSD--------YLDIKLLIAGD-GPL---RATLERLIKALG----- 242 (360)
T ss_pred cCCCCEEEEEEeeCchhcCcHH-HHHHHH---HHHhh--------CCCeEEEEEcC-CCc---HHHHHHHHHhcC-----
Confidence 4567778888999999998877 554443 34320 12467888884 221 244445544332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
..+ +|.|+.. ++-...++.+||+-...|. .|..|..-+=+|.-|++.|++--|...|+.++ ++++|
T Consensus 243 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----~g~~~ 308 (360)
T cd04951 243 ---LSN--RVKLLGL--RDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD----SGLIV 308 (360)
T ss_pred ---CCC--cEEEecc--cccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC----CceEe
Confidence 122 5777763 3334457899999776555 48888888899999999999977887776543 55555
No 74
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=76.36 E-value=6.6 Score=36.96 Aligned_cols=125 Identities=18% Similarity=0.096 Sum_probs=65.5
Q ss_pred Ccceecccccccccccccchhhh-HHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILG-IVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~-ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
|.++.+.+-+++.+|.... ++. .+.+ +++. ..+.++++.|...+ + ++.. ..
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~---l~~~--------~p~~~l~i~G~~~~------~-l~~~--~~------- 52 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALER---LKEK--------HPDIELIIIGNGPD------E-LKRL--RR------- 52 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHH---HHHH--------STTEEEEEECESS-------H-HCCH--HH-------
T ss_pred Ccccccccccccccccccc-hhhhHHHH---HHHH--------CcCEEEEEEeCCHH------H-HHHh--cC-------
Confidence 4567888889998888776 555 5444 4431 22467888888433 1 2211 01
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeeccc
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAR 845 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~ 845 (965)
-+|.|++.. +-...++.+||+..... ..-|.+++.-+-++..|++.|.+-.| .-++.+. .+..+++..+
T Consensus 53 -----~~v~~~g~~--~e~~~~l~~~dv~l~p~-~~~~~~~~k~~e~~~~G~pvi~~~~~-~~~~~~~--~~~~~~~~~~ 121 (135)
T PF13692_consen 53 -----PNVRFHGFV--EELPEILAAADVGLIPS-RFNEGFPNKLLEAMAAGKPVIASDNG-AEGIVEE--DGCGVLVAND 121 (135)
T ss_dssp -----CTEEEE-S---HHHHHHHHC-SEEEE-B-SS-SCC-HHHHHHHCTT--EEEEHHH-CHCHS-----SEEEE-TT-
T ss_pred -----CCEEEcCCH--HHHHHHHHhCCEEEEEe-eCCCcCcHHHHHHHHhCCCEEECCcc-hhhheee--cCCeEEECCC
Confidence 169999887 34455678899999644 33446667778899999999999664 3333333 2344444445
Q ss_pred hhhhh
Q 002111 846 AHEIA 850 (965)
Q Consensus 846 ~~ev~ 850 (965)
.+++.
T Consensus 122 ~~~l~ 126 (135)
T PF13692_consen 122 PEELA 126 (135)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 75
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=75.68 E-value=22 Score=40.30 Aligned_cols=110 Identities=5% Similarity=-0.011 Sum_probs=64.4
Q ss_pred CCcceecccccccccccccchhhhHHH-HHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVY-RYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~-ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~D 764 (965)
++..+.+++=|+..+|.... ++..+. -+.++++. .....+++.|.... +. +...+. .
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~--------~p~~~l~ivG~g~~-----~~----~~~l~~----~ 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRAR--------RPAAEFYIVGAKPS-----PA----VRALAA----L 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHH--------CCCcEEEEECCCCh-----HH----HHHhcc----C
Confidence 45567788999999997765 443332 23444431 11356777776432 11 222221 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccc
Q 002111 765 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 826 (965)
Q Consensus 765 p~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGa 826 (965)
+ .|.|+..-+ .+ ..++.+||+...-|+.+ |..|..-+=+|.-|++.|+|-.|.
T Consensus 280 ----~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~~-eG~~~~~lEAma~G~PVV~t~~~~ 332 (397)
T TIGR03087 280 ----P--GVTVTGSVA-DV-RPYLAHAAVAVAPLRIA-RGIQNKVLEAMAMAKPVVASPEAA 332 (397)
T ss_pred ----C--CeEEeeecC-CH-HHHHHhCCEEEeccccc-CCcccHHHHHHHcCCCEEecCccc
Confidence 1 366665332 33 45779999998765422 444445677899999999996543
No 76
>PHA01633 putative glycosyl transferase group 1
Probab=71.82 E-value=14 Score=42.31 Aligned_cols=122 Identities=16% Similarity=0.076 Sum_probs=82.2
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
|+.+..+++-|++.+|.+.+ ++..+.++.+ + .|.-. ...++++.|. + .+.+ .
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~--~-~p~~~----~~i~l~ivG~--------~----~~~~--------l 197 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNT--K-YPDIA----KKIHFFVISH--------K----QFTQ--------L 197 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHH--h-CCCcc----ccEEEEEEcH--------H----HHHH--------c
Confidence 46677788999999999998 7777665422 1 11100 0135666662 1 1111 1
Q ss_pred CCCCcceEEEecCCC---hhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEee
Q 002111 766 EIGDLLKVIFVPDYN---VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 766 ~i~~~LKVVFlenYn---VslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
.+.+ +|.|+-.+. -+-...++.+||+-..-|. .|+.|-.-+-+|.-|++.|+|--|...|+. |+...++|
T Consensus 198 ~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~---g~~~~~Li 270 (335)
T PHA01633 198 EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFT---SWQWNLLI 270 (335)
T ss_pred CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeec---CCccceee
Confidence 2334 688875332 2334468899999998887 599999999999999999999888888874 44344666
No 77
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=70.34 E-value=25 Score=39.29 Aligned_cols=125 Identities=11% Similarity=0.029 Sum_probs=75.6
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 768 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~ 768 (965)
...+++=|+..+|...+ ...+..+.+++. +..+++.|.. |... .+-+++... .+.
T Consensus 181 ~~i~~~Grl~~~~~k~~--~~l~~a~~~~~~-----------~~~l~ivG~g-~~~~---~l~~~~~~~--------~l~ 235 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNV--KELFDGLSQTTG-----------EWQLHIIGDG-SDFE---KCKAYSREL--------GIE 235 (359)
T ss_pred cEEEEEEEEecccCcCH--HHHHHHHHhhCC-----------CeEEEEEeCC-ccHH---HHHHHHHHc--------CCC
Confidence 44567778876644322 222333333321 4578888754 3322 233333222 123
Q ss_pred CcceEEEecCCCh--hhhhhhccccccccccCCCccccCCCccchhhcccceEeeec-ccccccccccccccceEeecc
Q 002111 769 DLLKVIFVPDYNV--SVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL-DGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 769 ~~LKVVFlenYnV--slAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTl-DGanvEI~e~vg~eN~fiFG~ 844 (965)
+ +|.|+.--+. ......+..||+....|. .|+-|.+-.=+|.-|.+.|+|- .|...|+.+. ..|++++..
T Consensus 236 ~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv~~ 308 (359)
T PRK09922 236 Q--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELYTP 308 (359)
T ss_pred C--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEECC
Confidence 3 6888865332 233334567899998775 6988988899999999999996 5767676654 368888853
No 78
>PLN02275 transferase, transferring glycosyl groups
Probab=70.23 E-value=24 Score=39.99 Aligned_cols=141 Identities=14% Similarity=0.120 Sum_probs=86.0
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhh-----hh-ccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhc
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVE-----RK-AKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVN 762 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~-----r~-~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN 762 (965)
.+.+.+-|++..|.... ++..+..+......-... .+ .......|++.|.- |.- .++-+++.+.+
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G-~~~---~~l~~~~~~~~---- 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKG-PQK---AMYEEKISRLN---- 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCC-CCH---HHHHHHHHHcC----
Confidence 34456789999999876 666655553221000000 00 00123678888864 221 23444443332
Q ss_pred CCcCCCCcceEEEecCC-Chhhhhhhcccccccccc--CCCccccCCCccchhhcccceEeeecccccccccccccccce
Q 002111 763 HDPEIGDLLKVIFVPDY-NVSVAELLIPASELSQHI--STAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 839 (965)
Q Consensus 763 ~Dp~i~~~LKVVFlenY-nVslAe~LipasDvs~ni--stag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~ 839 (965)
+. .|+|++.| .-+-...++.+||+..-. |.. .|.-|..-+=+|.-|.+.|+|-.|..-||.++. .|+
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~-~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g--~~G 354 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDG--KNG 354 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccc-cccccHHHHHHHHCCCCEEEecCCChHHHccCC--CCe
Confidence 22 38888764 445556778999998631 222 266677778899999999999999988887654 899
Q ss_pred Eeeccchhhh
Q 002111 840 FLFGARAHEI 849 (965)
Q Consensus 840 fiFG~~~~ev 849 (965)
|++. ..+++
T Consensus 355 ~lv~-~~~~l 363 (371)
T PLN02275 355 LLFS-SSSEL 363 (371)
T ss_pred EEEC-CHHHH
Confidence 9997 34443
No 79
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=53.49 E-value=1.2e+02 Score=36.06 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=76.8
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCC-CCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-ATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~-P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
+...++.+-|++.-|...+ +|..+.++.+ + .|+-+ ..+++|..|-+. .....-.++.+.|.+++..||..-
T Consensus 258 ~~~vIl~VgRLd~~KGi~~-ll~A~~~ll~--~-~p~~~----~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~ 329 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPE-RLLAFERFLE--E-HPEWR----GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRF 329 (456)
T ss_pred CCeEEEEccccccccCHHH-HHHHHHHHHH--h-Ccccc----CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhcc
Confidence 4567779999999999877 7777666532 2 44321 123455443222 112223456666666666566422
Q ss_pred CCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhcc-----cceEeeecccccccc
Q 002111 766 EIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN-----GCILIGTLDGANVEI 830 (965)
Q Consensus 766 ~i~~~LKVVFlen-YnVslAe~LipasDvs~nistag~EASGTSnMKfamN-----Gal~lgTlDGanvEI 830 (965)
..-+...|+|+.. .+-+---.++.+|||-.-+|.. |.-|..-+=+|.= |++.+|...|+--++
T Consensus 330 ~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~--EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l 398 (456)
T TIGR02400 330 GTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLR--DGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL 398 (456)
T ss_pred CCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccc--cccCccHHHHHHhcCCCCceEEEeCCCCChHHh
Confidence 2222334777774 3344445578999998877753 4444444444433 666888878876554
No 80
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=53.38 E-value=6.2e+02 Score=32.73 Aligned_cols=129 Identities=9% Similarity=0.048 Sum_probs=72.6
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEE-EeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 002111 688 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI-FGGKAFATYVQAKRIVKFITDVGATVNHDPE 766 (965)
Q Consensus 688 slfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~I-FaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~ 766 (965)
.-+++.+=|++.-|--.+ +|.-++++.+ + .|.-+ ..+++| .||-+.-....-.++-+.|.+++..||..-.
T Consensus 279 ~~lIl~VgRLd~~KGi~~-lL~Afe~lL~--~-~P~~~----~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g 350 (797)
T PLN03063 279 RKVILGVDRLDMIKGIPQ-KYLAFEKFLE--E-NPEWR----DKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFG 350 (797)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc----CcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 456778999987776555 7766666532 2 44322 124555 4442221111223455666666655664311
Q ss_pred CCCcceEEEecC-CChhhhhhhccccccccccC------CCcccc--CCCccchhhcccceEeeeccccccc
Q 002111 767 IGDLLKVIFVPD-YNVSVAELLIPASELSQHIS------TAGMEA--SGTSNMKFAMNGCILIGTLDGANVE 829 (965)
Q Consensus 767 i~~~LKVVFlen-YnVslAe~LipasDvs~nis------tag~EA--SGTSnMKfamNGal~lgTlDGanvE 829 (965)
.-+..-|+|+.. ..-.---.+..+|||-.-+| ...+|| |||- -.|++.+|-..|+--+
T Consensus 351 ~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p-----~~gvlVlSe~~G~~~~ 417 (797)
T PLN03063 351 SVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA-----KKGVLVLSEFAGAGQS 417 (797)
T ss_pred cCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecC-----CCCCEEeeCCcCchhh
Confidence 123345777764 22233335789999877665 456675 5553 4788999988886544
No 81
>PLN02501 digalactosyldiacylglycerol synthase
Probab=49.19 E-value=60 Score=41.28 Aligned_cols=118 Identities=11% Similarity=0.031 Sum_probs=79.3
Q ss_pred cccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcc
Q 002111 692 IQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 771 (965)
Q Consensus 692 vq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~L 771 (965)
.++=|++..|.... ++..+. +++. . .....+++.|.- |.- ..+-+++.+.+ +
T Consensus 550 LfVGRLa~EKGld~-LLeAla---~L~~-~-------~pnvrLvIVGDG-P~r---eeLe~la~eLg------------L 601 (794)
T PLN02501 550 YFLGKMVWAKGYRE-LIDLLA---KHKN-E-------LDGFNLDVFGNG-EDA---HEVQRAAKRLD------------L 601 (794)
T ss_pred EEEEcccccCCHHH-HHHHHH---HHHh-h-------CCCeEEEEEcCC-ccH---HHHHHHHHHcC------------C
Confidence 34569999999887 655443 3432 0 113466677753 321 22333333222 2
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 772 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 772 KVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
.|.|+.. ...++.++.++||.-+-|+ .|.=|+.-+=+|.-|++.|+|--|.+..+. +..|+++++.
T Consensus 602 ~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e~V~---~g~nGll~~D 667 (794)
T PLN02501 602 NLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNEFFR---SFPNCLTYKT 667 (794)
T ss_pred EEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCceEe---ecCCeEecCC
Confidence 5888854 4556678999999999887 699999999999999999999877754332 3478888854
No 82
>PRK10125 putative glycosyl transferase; Provisional
Probab=48.96 E-value=39 Score=39.27 Aligned_cols=55 Identities=13% Similarity=-0.050 Sum_probs=46.9
Q ss_pred hhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 785 ELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 785 e~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
..++.+||+.-..|. .|+-|+..+=+|.-|++.|+|-=|...|+.+ ++|++++..
T Consensus 301 ~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~---~~~G~lv~~ 355 (405)
T PRK10125 301 MSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQ---KSGGKTVSE 355 (405)
T ss_pred HHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEe---CCcEEEECC
Confidence 456789999998776 7999999999999999999998888888764 358999864
No 83
>PLN02846 digalactosyldiacylglycerol synthase
Probab=33.54 E-value=1.2e+02 Score=36.49 Aligned_cols=119 Identities=14% Similarity=0.071 Sum_probs=79.7
Q ss_pred ecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCc
Q 002111 691 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL 770 (965)
Q Consensus 691 dvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~ 770 (965)
.+++=|++.-|.... ++.. +.+|++-.+ ...+++.|.- |.-. ++-+++.+++
T Consensus 231 ~l~vGRL~~eK~~~~-Li~a---~~~l~~~~~--------~~~l~ivGdG-p~~~---~L~~~a~~l~------------ 282 (462)
T PLN02846 231 AYYIGKMVWSKGYKE-LLKL---LHKHQKELS--------GLEVDLYGSG-EDSD---EVKAAAEKLE------------ 282 (462)
T ss_pred EEEEecCcccCCHHH-HHHH---HHHHHhhCC--------CeEEEEECCC-ccHH---HHHHHHHhcC------------
Confidence 568899999998876 5544 444543011 2346666654 3222 2223332221
Q ss_pred ceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 771 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 771 LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
|.+.|+..+. -.+.++.++||..+-|+ .|.-|+.-+-+|.-|.+.|++-.|.+ |+... ..|++++..
T Consensus 283 l~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~~~ 349 (462)
T PLN02846 283 LDVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTYDD 349 (462)
T ss_pred CcEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEecCC
Confidence 1243455552 44578899999999997 79999999999999999999988875 76655 489999953
No 84
>PF14474 RTC4: RTC4-like domain
Probab=31.50 E-value=32 Score=34.22 Aligned_cols=32 Identities=28% Similarity=0.553 Sum_probs=26.4
Q ss_pred hhhHHHH-HHHHHHhcCCCHHHHHHHhccceee
Q 002111 405 TLCIPEL-IRILIDLKGLSWKEAWNITQRTVAY 436 (965)
Q Consensus 405 alai~EL-mRiL~D~~gl~w~eAw~it~~t~~y 436 (965)
.+++||+ +|.-+++-+++-++|++|.+.|.-|
T Consensus 85 ~VLvPEl~~~LI~EDm~v~~~~A~~il~eS~~~ 117 (124)
T PF14474_consen 85 YVLVPELAVRLIMEDMGVDDEEARQILEESSEY 117 (124)
T ss_pred HHhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4689999 5566788899999999999888655
No 85
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=28.99 E-value=3.6e+02 Score=33.01 Aligned_cols=177 Identities=12% Similarity=0.073 Sum_probs=103.6
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 686 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 686 pdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
|..+.=++|-|+ +=|+..- ++..+.+|.+- +|. .++.|-|...+. ...+.+-++|..+....+.+.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~-~I~av~~~~~~---~p~--------~~L~~~gy~~~~-~~~~~l~~~i~~~~~~~~~~~ 384 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQ-ILQQLLQYILK---NPD--------YELKILTYNNDN-DITQLLEDILEQINEEYNQDK 384 (519)
T ss_pred cceEEEEEcCCC-ChHHHHH-HHHHHHHHHhh---CCC--------eEEEEEEecCch-hHHHHHHHHHHHHHhhhchhh
Confidence 344555556688 7777766 66666666332 332 467778887552 234455555555543311111
Q ss_pred ------------------CCCCcceEEEecCCCh--hhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 002111 766 ------------------EIGDLLKVIFVPDYNV--SVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 825 (965)
Q Consensus 766 ------------------~i~~~LKVVFlenYnV--slAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDG 825 (965)
+-......|.+.+|-- ++.+.+ .- ..+-+.+...|.=| +-|-++--|++.| .=|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~-~~--arl~id~s~~eg~~-~~ieAiS~GiPqI--nyg 458 (519)
T TIGR03713 385 NFFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISAL-DK--LRLIIDLSKEPDLY-TQISGISAGIPQI--NKV 458 (519)
T ss_pred hccccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHH-hh--heEEEECCCCCChH-HHHHHHHcCCCee--ecC
Confidence 1111114788888877 666433 33 33445556667777 7788888888888 111
Q ss_pred ccccccccccccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHhhccCCCCCCCccccc
Q 002111 826 ANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLV 905 (965)
Q Consensus 826 anvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v 905 (965)
. -|+.+. ..||+|.| +..+|..
T Consensus 459 ~-~~~V~d--~~NG~li~---------------------------------------d~~~l~~---------------- 480 (519)
T TIGR03713 459 E-TDYVEH--NKNGYIID---------------------------------------DISELLK---------------- 480 (519)
T ss_pred C-ceeeEc--CCCcEEeC---------------------------------------CHHHHHH----------------
Confidence 1 122222 25555552 2333333
Q ss_pred ccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHH
Q 002111 906 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 952 (965)
Q Consensus 906 ~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eY 952 (965)
.+..+..+.+.|.+++..++..+-.||++..+...
T Consensus 481 ------------al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW 515 (519)
T TIGR03713 481 ------------ALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERL 515 (519)
T ss_pred ------------HHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 33344568899999999999999999999888653
No 86
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.49 E-value=3.2e+02 Score=27.86 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=76.1
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccC-eEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVP-RVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 767 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~P-r~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i 767 (965)
.+..++-|+.+.|+..+ ++..+.. +.+ ..| ..+++.|..... -..+.+++.....
T Consensus 200 ~~i~~~g~~~~~k~~~~-~i~~~~~---~~~---------~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~-------- 255 (381)
T COG0438 200 FVVLYVGRLDPEKGLDL-LIEAAAK---LKK---------RGPDIKLVIVGDGPER---REELEKLAKKLGL-------- 255 (381)
T ss_pred eEEEEeeccChhcCHHH-HHHHHHH---hhh---------hcCCeEEEEEcCCCcc---HHHHHHHHHHhCC--------
Confidence 67778888999888777 5544433 322 112 567777776665 1111112222221
Q ss_pred CCcceEEEecCCC-hhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 768 GDLLKVIFVPDYN-VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 768 ~~~LKVVFlenYn-VslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
.+ +|.|+-.-. -.+.+ ++..||+...-|.- |+-|..-+-++.-|.+.|+|-=|...|+....+ +++++..
T Consensus 256 ~~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~~--e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~--~g~~~~~ 326 (381)
T COG0438 256 ED--NVKFLGYVPDEELAE-LLASADVFVLPSLS--EGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGE--TGLLVPP 326 (381)
T ss_pred CC--cEEEecccCHHHHHH-HHHhCCEEEecccc--ccchHHHHHHHhcCCcEEECCCCChHHHhcCCC--ceEecCC
Confidence 11 566633322 23444 66767888877665 888888888889999999998877877665442 4554443
No 87
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=28.16 E-value=83 Score=38.21 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhhhhcCCcCCCCcceEEEecC-CChhhhhhhccccccccccCCCc------cccCCCccchhhcccceEe
Q 002111 748 KRIVKFITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAG------MEASGTSNMKFAMNGCILI 820 (965)
Q Consensus 748 K~IIk~I~~va~~iN~Dp~i~~~LKVVFlen-YnVslAe~LipasDvs~nistag------~EASGTSnMKfamNGal~l 820 (965)
+++-+.|..+..-||..=-.-+..-|.|+.- .+-..--.|..+||+-.=+|.+. +|---+..+| +|+|.|
T Consensus 335 ~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~---~G~LiL 411 (486)
T COG0380 335 QALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDK---PGVLIL 411 (486)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCC---CCcEEE
Confidence 6677778887777886444444456777753 33333444778999999999874 3433333332 899999
Q ss_pred eecccccccccccc
Q 002111 821 GTLDGANVEIRQEV 834 (965)
Q Consensus 821 gTlDGanvEI~e~v 834 (965)
|-.=|+--|+.+++
T Consensus 412 SeFaGaa~~L~~Al 425 (486)
T COG0380 412 SEFAGAASELRDAL 425 (486)
T ss_pred eccccchhhhccCE
Confidence 99999998877543
No 88
>PF14407 Frankia_peptide: Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Probab=25.80 E-value=34 Score=30.58 Aligned_cols=41 Identities=24% Similarity=0.185 Sum_probs=33.3
Q ss_pred hhhhhhhhhHHHHhhcCchHHHHHHHHHcCCChHHHhccCC
Q 002111 152 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEP 192 (965)
Q Consensus 152 mEFL~GR~L~nnL~NLgl~~~~~eaL~~lG~~le~l~~~E~ 192 (965)
||.+|||++...=.-..+...-.+|.++.+++-|+|...|.
T Consensus 2 ~e~lIgrAv~D~~FRqqllad~~~A~~~Y~Lt~eeL~al~~ 42 (61)
T PF14407_consen 2 VERLIGRAVTDEAFRQQLLADPEEACKEYDLTPEELQALER 42 (61)
T ss_pred HHHHHHHHHcCHHHHHHHhcCHHHHHhhCCCCHHHHHHHHH
Confidence 79999999987766656666667799999999999988874
No 89
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=23.51 E-value=1.7e+02 Score=27.97 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=31.3
Q ss_pred CCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHhccc
Q 002111 393 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 433 (965)
Q Consensus 393 ~kvaihlNDtH---palai~ELmRiL~D~~gl~w~eAw~it~~t 433 (965)
.+|.||..-|. |++++.-||+ .+|++.++|++.++..
T Consensus 74 ~~VlVHC~~G~~RS~~v~~ayLm~----~~~~~~~~A~~~v~~~ 113 (133)
T PF00782_consen 74 GKVLVHCKAGLSRSGAVAAAYLMK----KNGMSLEEAIEYVRSR 113 (133)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHH----HHTSSHHHHHHHHHHH
T ss_pred ceeEEEeCCCcccchHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 57899999999 8888887775 4699999999998764
No 90
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=22.81 E-value=2.2e+02 Score=34.76 Aligned_cols=148 Identities=15% Similarity=0.080 Sum_probs=100.2
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecC--CCCcHHHHHHHHHHHHHhhhh
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA--FATYVQAKRIVKFITDVGATV 761 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA--~P~y~~aK~IIk~I~~va~~i 761 (965)
++-.-+|+.-+-||..=|.|.| +|....+...... .++ +.-...+|+|+- -+..-.-...++.+.++.+..
T Consensus 269 v~~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~-----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~ 341 (495)
T KOG0853|consen 269 VSGIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS-----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEY 341 (495)
T ss_pred ecccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC-----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHh
Confidence 4445688888889999999999 8886555544332 111 223455666633 233333444555555555432
Q ss_pred cCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEe
Q 002111 762 NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 841 (965)
Q Consensus 762 N~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fi 841 (965)
...++ .|.|++- .+-++...-++|.--...++..|+=|==-.-||-=|.++|+|--|-=+||.++. .|+|+
T Consensus 342 ---~l~g~--~v~~~~s--~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~--~tG~l 412 (495)
T KOG0853|consen 342 ---DLLGQ--FVWFLPS--TTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHG--VTGLL 412 (495)
T ss_pred ---CccCc--eEEEecC--CchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcC--Cccee
Confidence 22244 6777776 334444666777777777777799999999999999999999999999999766 89999
Q ss_pred eccchh
Q 002111 842 FGARAH 847 (965)
Q Consensus 842 FG~~~~ 847 (965)
.-.+.+
T Consensus 413 ~dp~~e 418 (495)
T KOG0853|consen 413 IDPGQE 418 (495)
T ss_pred eCCchH
Confidence 877443
No 91
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=22.35 E-value=44 Score=36.96 Aligned_cols=54 Identities=28% Similarity=0.383 Sum_probs=38.2
Q ss_pred hHHHHHHHHHcCCChHHHhccCCCCCCCC-CCchhchhhhHhhhh-ccCCCeEEEee
Q 002111 170 TGAYAEALSKLGQSLENVVSQEPDAALGN-GGLGRLASCFLDSMA-TLNYPAWGYGL 224 (965)
Q Consensus 170 ~~~~~eaL~~lG~~le~l~~~E~Da~LGn-GGLGrLAacfLdS~A-tL~~P~~GyGL 224 (965)
.+.++++|++.|++++||-..=.-.|=|+ +|| |.+..+.+.+| .+++|++|+.=
T Consensus 34 ~~~i~~~l~~~~~~~~did~iavt~GPGsftgL-rvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 34 PPLIEELLKEAGISLSDIDAIAVTRGPGSFTGL-RVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHTS-GGGESEEEEEEESS-HHHH-HHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCCCccccc-HHHHHHHHHHHHHhCCCeEeecc
Confidence 37899999999999998765543333333 477 88889999988 49999999863
Done!