Query 002111
Match_columns 965
No_of_seqs 251 out of 1184
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 12:48:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002111.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002111hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 3E-265 9E-270 2307.0 59.1 804 87-963 39-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 1E-241 4E-246 2116.6 68.5 800 88-965 12-822 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 1E-239 5E-244 2092.8 58.1 786 87-961 5-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 9E-237 3E-241 2068.8 60.0 784 87-965 4-794 (796)
5 3vue_A GBSS-I, granule-bound s 99.3 4.9E-12 1.7E-16 146.0 13.6 275 563-957 230-508 (536)
6 3nb0_A Glycogen [starch] synth 98.1 4E-05 1.4E-09 91.6 16.8 228 564-842 250-573 (725)
7 2qzs_A Glycogen synthase; glyc 97.7 0.00041 1.4E-08 76.8 15.8 138 676-843 280-424 (485)
8 1rzu_A Glycogen synthase 1; gl 97.7 0.00076 2.6E-08 74.6 16.6 261 567-954 199-470 (485)
9 3fro_A GLGA glycogen synthase; 96.9 0.0067 2.3E-07 65.0 13.0 135 677-843 243-378 (439)
10 2x6q_A Trehalose-synthase TRET 96.8 0.0086 2.9E-07 64.7 12.4 134 684-843 227-364 (416)
11 3s28_A Sucrose synthase 1; gly 96.7 0.0053 1.8E-07 74.9 11.7 144 679-844 563-714 (816)
12 3okp_A GDP-mannose-dependent a 96.5 0.017 5.9E-07 61.0 12.6 129 684-843 194-327 (394)
13 3oy2_A Glycosyltransferase B73 96.4 0.018 6E-07 62.1 11.8 125 687-833 183-314 (413)
14 2f9f_A First mannosyl transfer 96.3 0.0081 2.8E-07 58.1 7.6 136 681-848 16-151 (177)
15 3c48_A Predicted glycosyltrans 96.2 0.018 6.1E-07 62.4 10.6 137 684-844 239-375 (438)
16 2bfw_A GLGA glycogen synthase; 96.2 0.012 4.2E-07 56.9 8.3 135 677-844 28-164 (200)
17 2r60_A Glycosyl transferase, g 96.0 0.025 8.6E-07 63.0 10.9 136 684-844 258-408 (499)
18 2jjm_A Glycosyl transferase, g 95.9 0.019 6.5E-07 61.6 9.2 127 684-843 207-333 (394)
19 2iw1_A Lipopolysaccharide core 95.0 0.047 1.6E-06 57.4 8.0 128 684-843 192-319 (374)
20 2gek_A Phosphatidylinositol ma 94.5 0.091 3.1E-06 55.9 8.9 125 687-843 207-332 (406)
21 2iuy_A Avigt4, glycosyltransfe 93.2 0.13 4.5E-06 53.9 6.9 129 687-848 161-297 (342)
22 3qhp_A Type 1 capsular polysac 91.2 0.69 2.4E-05 43.2 8.7 113 689-833 3-117 (166)
23 2vsy_A XCC0866; transferase, g 85.3 6.8 0.00023 44.1 13.2 104 690-822 378-482 (568)
24 1uqt_A Alpha, alpha-trehalose- 79.6 10 0.00036 43.3 11.9 141 687-843 254-402 (482)
25 1vgv_A UDP-N-acetylglucosamine 78.6 17 0.00057 38.3 12.4 66 772-847 264-330 (384)
26 3beo_A UDP-N-acetylglucosamine 77.2 6.5 0.00022 41.3 8.7 66 772-847 264-330 (375)
27 2x0d_A WSAF; GT4 family, trans 55.6 42 0.0014 37.1 9.9 123 687-844 240-363 (413)
28 1f0k_A MURG, UDP-N-acetylgluco 48.6 37 0.0013 35.4 7.7 99 689-825 185-283 (364)
29 3t5t_A Putative glycosyltransf 37.2 1.1E+02 0.0038 35.4 9.9 136 688-843 281-421 (496)
30 2hy7_A Glucuronosyltransferase 33.1 1.2E+02 0.0042 32.9 9.1 105 689-843 223-335 (406)
31 3u7q_B Nitrogenase molybdenum- 30.9 3.8E+02 0.013 31.0 13.0 94 126-223 349-470 (523)
32 3emu_A Leucine rich repeat and 21.1 89 0.003 30.0 4.6 37 393-433 88-127 (161)
33 3s4e_A Dual specificity protei 20.2 1E+02 0.0035 28.6 4.7 37 393-433 82-121 (144)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=2.6e-265 Score=2307.00 Aligned_cols=804 Identities=48% Similarity=0.821 Sum_probs=769.5
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhh
Q 002111 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (965)
Q Consensus 87 ~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~N 166 (965)
.++++|+++|.+||++++|+++.+|+..++|.|||.+|||+|+++|.+|+++|.+.+.|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHH-------------HHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeE
Q 002111 167 LGLTGAY-------------AEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQ 233 (965)
Q Consensus 167 Lgl~~~~-------------~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ 233 (965)
|||++++ ++||++||++|++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCceeeeccccccCCCCcccccCCceEEEEeCCEeee--CC-CCCe--eeeCCeeEEEEEEeecCCCCCCCCeEEEE
Q 002111 234 RITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP--GS-DGKS--HWIGGEDIKAVAYDIPIPGYKTKTTINLR 308 (965)
Q Consensus 234 ~I~dG~Q~E~pd~Wl~~gnPwei~r~d~~~~V~f~G~v~~--~~-dG~~--~w~~~e~V~Av~yDvpi~Gy~~~~~~~LR 308 (965)
+|.||||+|.||+||..|||||++|++.+|+|+|+|+|+. +. +|+. .|++++.|+|||||+|||||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 34 6754 49999999999999999999999999999
Q ss_pred EEEeecCCCcccccccCCCchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCccccc
Q 002111 309 LWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNW 388 (965)
Q Consensus 309 LW~a~v~~~~fdl~~fn~gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l 388 (965)
||+++++. .|||..||.|||.+|+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+| +|
T Consensus 279 LW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~---~l 354 (879)
T 1ygp_A 279 LWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR---PW 354 (879)
T ss_dssp EEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CG
T ss_pred EEEeccCc-ccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhCC---Ch
Confidence 99999655 899999999999999999999999999999999999999999999999999999999999999874 79
Q ss_pred ccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHH
Q 002111 389 EEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMI 468 (965)
Q Consensus 389 ~~lp~kvaihlNDtHpalai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~I 468 (965)
++||++++|||||||||||||||||+|+|++|++|++||+||++||+||||||||||||+||++||+++||||++||++|
T Consensus 355 ~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ei 434 (879)
T 1ygp_A 355 TEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDI 434 (879)
T ss_dssp GGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHH
T ss_pred hhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhCCCCchhhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccch
Q 002111 469 DEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGV 548 (965)
Q Consensus 469 n~~f~~~v~~~~~~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 548 (965)
|.+|+..+..+||+ +.+++.+|+||+ +
T Consensus 435 n~~f~~~~~~~~~~-----d~~~~~~l~ii~---------------------------------------------~--- 461 (879)
T 1ygp_A 435 NWFFLEDVAKKFPK-----DVDLLSRISIIE---------------------------------------------E--- 461 (879)
T ss_dssp HHHHHHHHHHHSTT-----CTHHHHHHCSEE---------------------------------------------C---
T ss_pred HHHHHHHHHHHcCC-----CHHHHHhcceec---------------------------------------------c---
Confidence 99999999999998 899999999988 3
Q ss_pred hhHhHhhhhcCCCCCeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCC-CcccccccccccccccccChhHHH
Q 002111 549 LEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPE-KFQNKTNGVTPRRWIRFCNPDLSS 627 (965)
Q Consensus 549 ~~~~~~~~~~~~~~~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~-kf~n~TNGVt~rrWl~~~Np~Ls~ 627 (965)
.+++++||||+||+++||+|||||+|||+|+|+++|+||+++||+ ||+|||||||||||+.+|||+|++
T Consensus 462 ----------~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~ 531 (879)
T 1ygp_A 462 ----------NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAK 531 (879)
T ss_dssp ----------CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHH
T ss_pred ----------CCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHH
Confidence 022368999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHhhcCC--CccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcCC-----CCcceecccccccc
Q 002111 628 ILTSWLGT--EDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKT-GYSVS-----PDAMFDIQVKRIHE 699 (965)
Q Consensus 628 Lit~~iG~--~~W~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~-g~~ld-----pdslfdvq~KR~he 699 (965)
||+++||+ ++|.+|+++|++|+++++|++|+++|+++|++||.+|++||++++ |+.|| |++|||||||||||
T Consensus 532 Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~he 611 (879)
T 1ygp_A 532 LISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHE 611 (879)
T ss_dssp HHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCG
T ss_pred HHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhH
Confidence 99999993 499999999999999999999999999999999999999999999 99999 99999999999999
Q ss_pred cccccchhhhHHHHHHHHHhcC------hhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceE
Q 002111 700 YKRQLMNILGIVYRYKKMKEMS------AVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKV 773 (965)
Q Consensus 700 YKRqlLNil~ii~ry~~ik~~~------~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKV 773 (965)
||||+||+|+|++||.+||+ + |....++++||||||||||||+|.+||.|||+|++||++|||||+++++|||
T Consensus 612 YKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKV 690 (879)
T 1ygp_A 612 YKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKV 690 (879)
T ss_dssp GGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHh-CccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEE
Confidence 99999999999999999998 6 5532245789999999999999999999999999999999999999999999
Q ss_pred EEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhh
Q 002111 774 IFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLR 853 (965)
Q Consensus 774 VFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~ 853 (965)
|||||||||+||+||||||||+||||||+||||||||||||||||||||||||||||+|+||+||+|+||++++||..+|
T Consensus 691 VFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~ 770 (879)
T 1ygp_A 691 VFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELR 770 (879)
T ss_dssp EEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHH
T ss_pred EEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEEEccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCChhHHHHHHHHhcCCCCcc---cHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHh-HH
Q 002111 854 KERSEGKFVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RW 929 (965)
Q Consensus 854 ~~~~~~~~~~~~~l~~v~d~i~~g~f~~~---~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~-~W 929 (965)
++++...|..+|.+++|+|+|.+|.|++. +|++||++|+.+ +|+|||++||+||++||++|+++|+|++ +|
T Consensus 771 ~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W 845 (879)
T 1ygp_A 771 YNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEW 845 (879)
T ss_dssp HHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHS-----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcC-----CCeEEEeccHHHHHHHHHHHHHHhcCcHHHH
Confidence 99866678899999999999999999764 499999999876 7999999999999999999999999999 99
Q ss_pred HHHHHHhhhcCCCCChHHHHHHHHHHHhcccccC
Q 002111 930 TRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVE 963 (965)
Q Consensus 930 ~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~p~~ 963 (965)
++|||.|||+||+|||||||+|||++||+++|++
T Consensus 846 ~~~~i~NiA~~G~FSSDRtI~eYa~~IW~~~p~~ 879 (879)
T 1ygp_A 846 LKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPVT 879 (879)
T ss_dssp HHHHHHHHHHHGGGBHHHHHHHHHHHTTCCCCC-
T ss_pred HHHHHHHHHhcCccCchHHHHHHHHHhhCCCCCC
Confidence 9999999999999999999999999999999964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=1.1e-241 Score=2116.55 Aligned_cols=800 Identities=45% Similarity=0.814 Sum_probs=759.7
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhhc
Q 002111 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNL 167 (965)
Q Consensus 88 ~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~NL 167 (965)
++++|+++|.+||++++|+++.+|++.++|+|||.+|||+++++|++|+++|.+.++|+||||||||||||+|.|||+||
T Consensus 12 ~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~gr~L~n~l~nl 91 (824)
T 2gj4_A 12 NVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNL 91 (824)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEEECCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcchhhhHHHHHHC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeecccc
Q 002111 168 GLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDW 247 (965)
Q Consensus 168 gl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~W 247 (965)
||+++++|||.+||++|++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||||+|.||+|
T Consensus 92 g~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~W 171 (824)
T 2gj4_A 92 ALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDW 171 (824)
T ss_dssp TCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEETTEEEEECCCT
T ss_pred CCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEeeCCEEEEcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCCC
Q 002111 248 LELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327 (965)
Q Consensus 248 l~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~g 327 (965)
|..|||||++|++.+++|+|+|+|+.+.+| ..|++++.|+|+|||+|||||+|++||+||||+++ ++++|||..||.|
T Consensus 172 l~~~~pwe~~r~~~~~~V~f~g~v~~~~~g-~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~~~f~~~~fn~G 249 (824)
T 2gj4_A 172 LRYGNPWEKARPEFTLPVHFYGRVEHTSQG-AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-APNDFNLKDFNVG 249 (824)
T ss_dssp TTTCCTTCEECGGGCEEEEESCEEEECSSS-EEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CCC----------
T ss_pred cccCCcccccCCCceEEEEeCCEEEecCCC-ceecccceEEEeeccCCcCCCCCCceEEEEEEEee-cCcccchhhccCc
Confidence 999999999999999999999999866678 37999999999999999999999999999999999 7789999999999
Q ss_pred chhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcc-----cccccCCCCceEEeCCC
Q 002111 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN-----VNWEEFPEKVAVQMNDT 402 (965)
Q Consensus 328 dy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~-----~~l~~lp~kvaihlNDt 402 (965)
+|..|+.++..+|+||++|||+|++++||+|||||||||||||+|||||+|++.+-|. .+|+.||++++||||||
T Consensus 250 ~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDt 329 (824)
T 2gj4_A 250 GYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDT 329 (824)
T ss_dssp CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESS
T ss_pred cHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhcCCCcEEEccCC
Confidence 9999999999999999999999999999999999999999999999999999775332 37999999999999999
Q ss_pred ChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCC
Q 002111 403 HPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGT 482 (965)
Q Consensus 403 Hpalai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~ 482 (965)
||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||.+|+..+..++|+
T Consensus 330 Hpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~ 409 (824)
T 2gj4_A 330 HPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPG 409 (824)
T ss_dssp TTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred chHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCchhhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCC
Q 002111 483 ADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPP 562 (965)
Q Consensus 483 ~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 562 (965)
+.+++.+|++++ + +.+
T Consensus 410 -----~~~~~~~~~~i~---------------------------------------------~--------------~~~ 425 (824)
T 2gj4_A 410 -----DVDRLRRMSLVE---------------------------------------------E--------------GAV 425 (824)
T ss_dssp -----CHHHHHHHCSEE---------------------------------------------C--------------SSS
T ss_pred -----cHHHHHhhhhhh---------------------------------------------h--------------cCC
Confidence 889999999988 4 345
Q ss_pred CeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCc
Q 002111 563 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNT 642 (965)
Q Consensus 563 ~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~ 642 (965)
+.||||+||+++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+++++|++.||+ +|++|+
T Consensus 426 ~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~-~W~~~~ 504 (824)
T 2gj4_A 426 KRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGE-EYISDL 504 (824)
T ss_dssp CEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCS-GGGGCG
T ss_pred CcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCc-hhhhCH
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred chHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcCh
Q 002111 643 GKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSA 722 (965)
Q Consensus 643 ~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~ 722 (965)
++|++|.++++|++|+++|+++|++||.+|++||++++|..+||+++||+|||||||||||+||+|++++||.+|++ +|
T Consensus 505 ~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~ 583 (824)
T 2gj4_A 505 DQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EP 583 (824)
T ss_dssp GGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CT
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHh-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 66
Q ss_pred hhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCcc
Q 002111 723 VERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM 802 (965)
Q Consensus 723 ~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~ 802 (965)
... ++|+||||||||||+|.+||.|||+|+++|+++||||+++++|||||+|||||++|++|+||||||+||||||+
T Consensus 584 ~~~---~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~ 660 (824)
T 2gj4_A 584 NKF---VVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGT 660 (824)
T ss_dssp TSC---CCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTS
T ss_pred CCC---CCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCC
Confidence 543 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCC
Q 002111 803 EASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVF 879 (965)
Q Consensus 803 EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f 879 (965)
||||||||||||||+|||||||||||||+++||++|+|+||.+++|+..++.++ |++ |..+|++++|++.+.+|.|
T Consensus 661 EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~f 739 (824)
T 2gj4_A 661 EASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFF 739 (824)
T ss_dssp CSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTT
T ss_pred CCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHHHHHHHcC-CCHHHHhcCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999998887665 543 7788999999999999999
Q ss_pred Ccc---cHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHH
Q 002111 880 GSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 956 (965)
Q Consensus 880 ~~~---~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~I 956 (965)
++. .|.+||++|.+ +|+|||++||+||++||++|+.+|+|+++|++||+.|||.+|+|||||||+|||++|
T Consensus 740 s~~~~~~y~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~i 813 (824)
T 2gj4_A 740 SPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREI 813 (824)
T ss_dssp CTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHc------CChhhhhhhHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHH
Confidence 754 49999999986 599999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCC
Q 002111 957 WNIIPVELP 965 (965)
Q Consensus 957 W~i~p~~~~ 965 (965)
|+++|++.|
T Consensus 814 w~~~~~~~~ 822 (824)
T 2gj4_A 814 WGVEPSRQR 822 (824)
T ss_dssp TCCCCCCCC
T ss_pred hCCCCCCCC
Confidence 999998765
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=1.4e-239 Score=2092.84 Aligned_cols=786 Identities=42% Similarity=0.732 Sum_probs=760.7
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhh
Q 002111 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (965)
Q Consensus 87 ~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~N 166 (965)
.++++|+++|.+||++++|+++.+|+..++|.|||.+|||+|.++|.+|++ .+.|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~n 80 (796)
T 1l5w_A 5 FNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLLN 80 (796)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHHh
Confidence 578899999999999999999999999999999999999999999999996 5689999999999999999999999
Q ss_pred cCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeeccc
Q 002111 167 LGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAED 246 (965)
Q Consensus 167 Lgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~ 246 (965)
|||+++++|||++||++|++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 81 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~ 160 (796)
T 1l5w_A 81 LGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (796)
T ss_dssp HTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCC
Q 002111 247 WLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNA 326 (965)
Q Consensus 247 Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~ 326 (965)
|+..|+|||++|++.+|+|+|+|+|+. + + +|++++.|+|||||+|||||+|+++|+||||+++++. .|||..||.
T Consensus 161 wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn~ 235 (796)
T 1l5w_A 161 WHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFND 235 (796)
T ss_dssp CCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHHT
T ss_pred cccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhcCC
Confidence 999999999999999999999999984 3 4 7999999999999999999999999999999999655 799999999
Q ss_pred CchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhh
Q 002111 327 GDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTL 406 (965)
Q Consensus 327 gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpal 406 (965)
|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.++ +|+.||++++||||||||||
T Consensus 236 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~~~~l~~p~viHlNDtHpal 312 (796)
T 1l5w_A 236 GDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR---KLHELADYEVIQLNDTHPTI 312 (796)
T ss_dssp TCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CGGGHHHHEEEEEESSTTTT
T ss_pred ccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC---ChhhcCCccEEEecCCccHh
Confidence 999999999999999999999999999999999999999999999999999999874 79999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCch
Q 002111 407 CIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPD 486 (965)
Q Consensus 407 ai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~ 486 (965)
++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|++++..++|.
T Consensus 313 ~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~---- 388 (796)
T 1l5w_A 313 AIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPG---- 388 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT----
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeee
Q 002111 487 LLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVR 566 (965)
Q Consensus 487 ~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~ 566 (965)
+.+++.+|++++ + +.||
T Consensus 389 -~~~~~~~~~i~~---------------------------------------------~-----------------~~vn 405 (796)
T 1l5w_A 389 -DEKVWAKLAVVH---------------------------------------------D-----------------KQVH 405 (796)
T ss_dssp -CHHHHHHHCSEE---------------------------------------------T-----------------TEEE
T ss_pred -cHHHHhhhhccc---------------------------------------------C-----------------Cccc
Confidence 899999999866 4 4899
Q ss_pred eeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHH
Q 002111 567 MANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLA 646 (965)
Q Consensus 567 MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~ 646 (965)
||+||+++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+|+++|++.+|+ +|++|++.|+
T Consensus 406 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~-~w~~d~~~l~ 484 (796)
T 1l5w_A 406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK-EWANDLDQLI 484 (796)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSS-CCTTCGGGGG
T ss_pred HHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCc-ccccCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999996 9999999999
Q ss_pred HhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhh
Q 002111 647 ELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERK 726 (965)
Q Consensus 647 ~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~ 726 (965)
+|+++++|++|+++|.++|++||.+|++||++++|+.+||+++||+|||||||||||+||+|++++||.+||+ +|...
T Consensus 485 ~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~~- 562 (796)
T 1l5w_A 485 NLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD- 562 (796)
T ss_dssp GGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTCC-
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhc-CCCCC-
Confidence 9999999999999987899999999999999999999999999999999999999999999999999999998 77654
Q ss_pred ccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCC
Q 002111 727 AKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASG 806 (965)
Q Consensus 727 ~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASG 806 (965)
++|+||||||||||+|.+||.|||+|+++|++|||||+++++|||||+|||||++|++|+||||||+||||||+||||
T Consensus 563 --~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsG 640 (796)
T 1l5w_A 563 --RVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASG 640 (796)
T ss_dssp --CCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCC
T ss_pred --CCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCc
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc-
Q 002111 807 TSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY- 882 (965)
Q Consensus 807 TSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f~~~- 882 (965)
||||||||||+|||||||||||||.|++|++|+|+||.+++||..++..+ |.+ |..+|.++++++.+.+|.|+..
T Consensus 641 Ts~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~ 719 (796)
T 1l5w_A 641 TGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGD 719 (796)
T ss_dssp SHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTC
T ss_pred hHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcc-cCHHHHhhcCHHHHHHHHHHHcCCCCCCc
Confidence 99999999999999999999999999999999999999999999999886 553 6678999999999999999764
Q ss_pred --cHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhccc
Q 002111 883 --NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNII 960 (965)
Q Consensus 883 --~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~ 960 (965)
+|.+||++|+++ .+|+|+|++||+||++||++|+++|+|+++|++|||.|||+||+|||||||+|||++||+++
T Consensus 720 ~~~y~~Ly~~L~~~----~~D~~~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~ 795 (796)
T 1l5w_A 720 KHAFDQMLHSIGKQ----GGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK 795 (796)
T ss_dssp TTTTHHHHHHTSTT----TCCTTCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhcc----CCCceeehhhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCC
Confidence 499999999851 15999999999999999999999999999999999999999999999999999999999998
Q ss_pred c
Q 002111 961 P 961 (965)
Q Consensus 961 p 961 (965)
|
T Consensus 796 P 796 (796)
T 1l5w_A 796 R 796 (796)
T ss_dssp C
T ss_pred C
Confidence 7
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=9.4e-237 Score=2068.79 Aligned_cols=784 Identities=42% Similarity=0.708 Sum_probs=751.7
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhh
Q 002111 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (965)
Q Consensus 87 ~~~~~~~~~i~~~l~~~~~~~~~~a~~~~~y~Ala~~vRD~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~N 166 (965)
.++++|+++|.+||++++|+++.+|+..++|.|||.+|||+|.++|.+|++.+... |+||||||||||||+|.|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 45568999999999999999999999999999999999999999999999988754 9999999999999999999999
Q ss_pred cCchHHHHHHHHHcCCChHHHhccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeeccCCcceeEEEeCCceeeeccc
Q 002111 167 LGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAED 246 (965)
Q Consensus 167 Lgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~ 246 (965)
|||+++++|||++||+++++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccccCCceEEEEeCCEeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEeecCCCcccccccCC
Q 002111 247 WLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNA 326 (965)
Q Consensus 247 Wl~~gnPwei~r~d~~~~V~f~G~v~~~~dG~~~w~~~e~V~Av~yDvpi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~ 326 (965)
|++.|+|||++|++.+|+|+|+|+ .|+|||||+|||||+|+++|+||||+++++ ..|||..||.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~~~-~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAEPW-EEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEEES-SSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecccc-cccchhhccC
Confidence 999999999999999999999985 467999999999999999999999999944 5899999999
Q ss_pred CchhhHHHhhhhcccccceecCCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhh
Q 002111 327 GDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTL 406 (965)
Q Consensus 327 gdy~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqDIirrf~~~~Gg~~~l~~lp~kvaihlNDtHpal 406 (965)
|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+++|++.+| +|+.||++++||||||||||
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~l~~l~~p~viHlNDtHpal 302 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK---DLSNFAEFHSVQLNDTHPVL 302 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---CSTTHHHHEEEEEESSTTTT
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC---ChhhcCCCeEEEeCCChHHh
Confidence 999999999999999999999999999999999999999999999999999999874 69999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHhccceeeeccCCCCcccccCCHHHHHHHchHHHHHHHHHhHHHHHHHHHhhCCCCch
Q 002111 407 CIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPD 486 (965)
Q Consensus 407 ai~ELmRiL~D~~gl~w~eAw~it~~t~~yTnHT~lpealEkw~~~L~~~lLPrh~~II~~In~~f~~~v~~~~~~~~~~ 486 (965)
++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|+..+..+ |+
T Consensus 303 ~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~---- 377 (796)
T 2c4m_A 303 AIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GL---- 377 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TC----
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 98
Q ss_pred hhHHHHhhhcccccCCCchhhhhhhcccccCCCCCCCcccccccCCCCCCchhhhhhhccchhhHhHhhhhcCCCCCeee
Q 002111 487 LLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQEPPQLVR 566 (965)
Q Consensus 487 ~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v~ 566 (965)
+++++.+|++++ + +.||
T Consensus 378 -~~~~~~~~~i~~---------------------------------------------~-----------------~~vn 394 (796)
T 2c4m_A 378 -DEETINRMAPIQ---------------------------------------------H-----------------GTVH 394 (796)
T ss_dssp -CHHHHHHHCSEE---------------------------------------------T-----------------TEEE
T ss_pred -cHhhhhccccee---------------------------------------------C-----------------Cccc
Confidence 899999999966 4 4899
Q ss_pred eeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHH
Q 002111 567 MANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLA 646 (965)
Q Consensus 567 MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~l~ 646 (965)
||+||+++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+|+++|++.+|+++|.+|+++|+
T Consensus 395 Ma~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~ 474 (796)
T 2c4m_A 395 MAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELK 474 (796)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGG
T ss_pred HHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999448999999999
Q ss_pred HhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhh
Q 002111 647 ELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERK 726 (965)
Q Consensus 647 ~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~ 726 (965)
+|+++++|++|+++|.++|++||++|++||++++|+.+||+++||+|||||||||||+||+|++++||.+||+ +|...
T Consensus 475 ~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~~- 552 (796)
T 2c4m_A 475 KLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLTD- 552 (796)
T ss_dssp GGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCCS-
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhh-CCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 66644
Q ss_pred ccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCC
Q 002111 727 AKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASG 806 (965)
Q Consensus 727 ~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASG 806 (965)
++|+||||||||||+|.+||.|||+|+++|++|||||+++++|||||+|||||++|++|+||||||+||||||+||||
T Consensus 553 --~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsG 630 (796)
T 2c4m_A 553 --IPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASG 630 (796)
T ss_dssp --SCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCC
T ss_pred --CCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCc
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCcc-
Q 002111 807 TSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY- 882 (965)
Q Consensus 807 TSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~---~~~~~~l~~v~d~i~~g~f~~~- 882 (965)
||||||||||+|||||||||||||.|++|++|+|+||.+++|+..++.. |++ |..+|.++++++.+.+|.|+..
T Consensus 631 Ts~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~ 708 (796)
T 2c4m_A 631 TSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES--YKPYELYETVPGLKRALDALDNGTLNDNN 708 (796)
T ss_dssp HHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTT
T ss_pred hHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh--hChHHHhhcCHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999987 654 6678899999999999999765
Q ss_pred --cHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHh-cCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcc
Q 002111 883 --NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY-CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 959 (965)
Q Consensus 883 --~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y-~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i 959 (965)
+|.+||++|..+.+++.+|+|||++||+||++||++|+++| +|+++|++|||.|||+||+|||||||+|||++||++
T Consensus 709 ~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~ 788 (796)
T 2c4m_A 709 SGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKL 788 (796)
T ss_dssp CCHHHHHHHHHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcccCCCCCcchhhhhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCC
Confidence 39999999974111222699999999999999999999998 999999999999999999999999999999999999
Q ss_pred cccCCC
Q 002111 960 IPVELP 965 (965)
Q Consensus 960 ~p~~~~ 965 (965)
+|+++|
T Consensus 789 ~~~~~~ 794 (796)
T 2c4m_A 789 EPTPAV 794 (796)
T ss_dssp CCCCC-
T ss_pred CCCCcC
Confidence 998764
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.33 E-value=4.9e-12 Score=146.02 Aligned_cols=275 Identities=14% Similarity=0.167 Sum_probs=191.6
Q ss_pred CeeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhh----hhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 002111 563 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFY----KLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 638 (965)
Q Consensus 563 ~~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~----~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W 638 (965)
+.++|-..++..|..|+.||.-+.+=+.+. |.... ..-+.++.-|.|||....| ||.-.. .+..
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~d~----~~~~--- 297 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEW----DPSKDK----YITA--- 297 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTTCS----SSSC---
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhc----CCCCcc----cccc---
Confidence 579999999999999999988776533221 11000 0123578999999999999 464211 1110
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 002111 639 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 718 (965)
Q Consensus 639 ~~d~~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik 718 (965)
++.... ..+.|..+|..| +++.|..+||+..+.+++-|+.++|...+ ++..+.+ |+
T Consensus 298 -----------~~~~~~-----~~~~K~~~k~~l----~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~---l~ 353 (536)
T 3vue_A 298 -----------KYDATT-----AIEAKALNKEAL----QAEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPE---LM 353 (536)
T ss_dssp -----------CCCTTT-----HHHHHHHHHHHH----HHHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHH---HT
T ss_pred -----------ccchhh-----hhhhhHHHHHHH----HHhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHH---hH
Confidence 111111 124677777665 45789999999999999999999999998 7776655 43
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 002111 719 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 798 (965)
Q Consensus 719 ~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nis 798 (965)
+ + ..++++.|...+.+.. .++ ..+... .+ +|.|+..|+......++.+||+...-|
T Consensus 354 ~-----~-----~~~l~l~G~G~~~~~~---~~~---~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS 409 (536)
T 3vue_A 354 Q-----E-----DVQIVLLGTGKKKFEK---LLK---SMEEKY------PG--KVRAVVKFNAPLAHLIMAGADVLAVPS 409 (536)
T ss_dssp T-----S-----SCEEEEECCBCHHHHH---HHH---HHHHHS------TT--TEEEECSCCHHHHHHHHHHCSEEEECC
T ss_pred h-----h-----CCeEEEEeccCchHHH---HHH---HHHhhc------CC--ceEEEEeccHHHHHHHHHhhheeeccc
Confidence 2 0 2356777755433322 222 222211 12 799999999999999999999999888
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCC
Q 002111 799 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV 878 (965)
Q Consensus 799 tag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~~g~ 878 (965)
+ .|.+|.+-|-+|..|++.|+|--|...|+.++. +|+|+|+.... +++ .
T Consensus 410 ~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg--~~G~~~~~~~~-----------~g~----------------l 458 (536)
T 3vue_A 410 R--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG--KTGFHMGRLSV-----------DCK----------------V 458 (536)
T ss_dssp S--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT--TTEEECCCCCS-----------CTT----------------C
T ss_pred c--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC--CCccccccCCC-----------cee----------------E
Confidence 7 599999999999999999999999999988664 89999985311 111 2
Q ss_pred CCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHh
Q 002111 879 FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 957 (965)
Q Consensus 879 f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW 957 (965)
|.+.|.+.|.+.|. ++...|.+ ..|.+|+...++. .||=+++.++|.+ +|
T Consensus 459 ~~~~d~~~la~ai~-------------------------ral~~~~~-~~~~~~~~~am~~--~fSW~~~A~~y~~-ly 508 (536)
T 3vue_A 459 VEPSDVKKVAATLK-------------------------RAIKVVGT-PAYEEMVRNCMNQ--DLSWKGPAKNWEN-VL 508 (536)
T ss_dssp CCHHHHHHHHHHHH-------------------------HHHHHTTS-HHHHHHHHHHHHS--CCSSHHHHHHHHH-HH
T ss_pred ECCCCHHHHHHHHH-------------------------HHHHhcCc-HHHHHHHHHHHHh--cCCHHHHHHHHHH-HH
Confidence 33445677776664 45556654 5698887766553 6999999999965 54
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=98.09 E-value=4e-05 Score=91.56 Aligned_cols=228 Identities=15% Similarity=0.154 Sum_probs=146.3
Q ss_pred eeeeeeeecccCCchhhHHHHHHHHHHHhHhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcc
Q 002111 564 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTG 643 (965)
Q Consensus 564 ~v~MA~Lal~~S~~VNGVS~lHsei~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~ 643 (965)
.++|=..+++.++.|+-||....+=++. ++..-|.++ |-|||....| ||.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f----~p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKF----QAF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCC----SST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCcccccc----Ccc-------------------
Confidence 4666667888999999997776664442 333345555 8999998888 342
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcCCCCc-ceeccccccc-ccccccchhhhHHHHHHHHHh
Q 002111 644 KLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG--YSVSPDA-MFDIQVKRIH-EYKRQLMNILGIVYRYKKMKE 719 (965)
Q Consensus 644 ~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g--~~ldpds-lfdvq~KR~h-eYKRqlLNil~ii~ry~~ik~ 719 (965)
. .+.+.|..+|.+|.++++.+.+ ..++++. +...-+-|+. +-|=-.| ++..+.++.+...
T Consensus 300 -----------~----~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 300 -----------H----EFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLK 363 (725)
T ss_dssp -----------T----HHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHH
T ss_pred -----------h----hhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHh
Confidence 1 1446888999999999988765 5777554 5555579998 6688888 8888888877632
Q ss_pred cChhhhhccccCeEEEEeecCCCCc----------------------HHHHHHHHHHH----------------------
Q 002111 720 MSAVERKAKFVPRVCIFGGKAFATY----------------------VQAKRIVKFIT---------------------- 755 (965)
Q Consensus 720 ~~~~~r~~~~~Pr~~IFaGKA~P~y----------------------~~aK~IIk~I~---------------------- 755 (965)
.+.... .+=..+|+.++..--- ..||++.....
T Consensus 364 ~~~~~~---~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 440 (725)
T 3nb0_A 364 VSGSKK---TVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSS 440 (725)
T ss_dssp HTTCCC---EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHH
T ss_pred hccCCC---cEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChH
Confidence 121111 1111234444422111 12333332211
Q ss_pred ----------HHhh------------h--------------hcCCcCCCCcceEEEecCCChhh-------hhhhccccc
Q 002111 756 ----------DVGA------------T--------------VNHDPEIGDLLKVIFVPDYNVSV-------AELLIPASE 792 (965)
Q Consensus 756 ----------~va~------------~--------------iN~Dp~i~~~LKVVFlenYnVsl-------Ae~LipasD 792 (965)
...+ + ++-...-.+++||||+|.|-=+. -+.++.+||
T Consensus 441 ~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad 520 (725)
T 3nb0_A 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCH 520 (725)
T ss_dssp HHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS
T ss_pred HHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhce
Confidence 0000 0 11011234889999999986553 356789999
Q ss_pred cccccCCCccccCCCccchhhcccceEeeecccccccccccc-c----ccceEee
Q 002111 793 LSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-G----EENFFLF 842 (965)
Q Consensus 793 vs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~v-g----~eN~fiF 842 (965)
+...-|. .|..|-.-|-+|.-|++.|.|--|--.|+..++ + .+|+++|
T Consensus 521 vfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV 573 (725)
T 3nb0_A 521 LGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYI 573 (725)
T ss_dssp EEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEE
T ss_pred EEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEE
Confidence 9999886 699999999999999999999777665544433 1 1456555
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.73 E-value=0.00041 Score=76.79 Aligned_cols=138 Identities=13% Similarity=0.119 Sum_probs=96.8
Q ss_pred HHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHH
Q 002111 676 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 755 (965)
Q Consensus 676 I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~ 755 (965)
++++.|..-+++....+++-|+..+|...+ ++..+.+ +++ . +.++++.|...+ .....+-+++.
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~-~---------~~~l~ivG~g~~--~~~~~l~~~~~ 343 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPG---LLE-Q---------GGQLALLGAGDP--VLQEGFLAAAA 343 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHH---HHH-T---------TCEEEEEEEECH--HHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHH---Hhh-C---------CcEEEEEeCCch--HHHHHHHHHHH
Confidence 455667654457888999999999999887 6655544 432 1 346777776432 12233444443
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 002111 756 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 835 (965)
Q Consensus 756 ~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg 835 (965)
+.+ + +|+|+..|.-.....++.+||+....|. .|..|.+-+-+|.-|++.|+|-.|...|+.++..
T Consensus 344 ~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~ 409 (485)
T 2qzs_A 344 EYP----------G--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCS 409 (485)
T ss_dssp HST----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCC
T ss_pred hCC----------C--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCc
Confidence 321 2 6887777766666788999999998877 6999999999999999999998888887765421
Q ss_pred -------ccceEeec
Q 002111 836 -------EENFFLFG 843 (965)
Q Consensus 836 -------~eN~fiFG 843 (965)
.+|+++|.
T Consensus 410 ~~~~~~~~~~G~l~~ 424 (485)
T 2qzs_A 410 LENLADGVASGFVFE 424 (485)
T ss_dssp HHHHHTTCCCBEEEC
T ss_pred cccccccccceEEEC
Confidence 15677664
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.66 E-value=0.00076 Score=74.63 Aligned_cols=261 Identities=15% Similarity=0.156 Sum_probs=157.0
Q ss_pred eeeeecccCCchhhHHHHHHHHHHHhHhh----hhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCc
Q 002111 567 MANLCVVGSHAVNGVAEIHSEIVTNEVFN----EFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNT 642 (965)
Q Consensus 567 MA~Lal~~S~~VNGVS~lHsei~k~~vf~----df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~ 642 (965)
+-..++..+..+-.||+-..+.+++..|. .+....+.++.-+-|||....|.....+. +-. .+.
T Consensus 199 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~--------~~~-~~~--- 266 (485)
T 1rzu_A 199 FLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHL--------IHD-NYS--- 266 (485)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTT--------SSS-CCB---
T ss_pred HHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCccccc--------ccc-ccc---
Confidence 33345555666667765554443321010 11223467888889999988875211110 000 000
Q ss_pred chHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcCh
Q 002111 643 GKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSA 722 (965)
Q Consensus 643 ~~l~~l~~~~dd~~~~~~w~~~K~~nK~~L~~~I~~~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~ 722 (965)
.++ + ..|..+|.. ++++.|..-++ ....+++=|+..+|...+ ++..+.++ ++ .
T Consensus 267 ---------~~~------~-~~~~~~~~~----~r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~-~- 319 (485)
T 1rzu_A 267 ---------AAN------L-KNRALNKKA----VAEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEI---VS-L- 319 (485)
T ss_dssp ---------TTB------C-TTHHHHHHH----HHHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHH---HH-T-
T ss_pred ---------ccc------h-hhHHHhHHH----HHHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHH---Hh-c-
Confidence 001 1 122233322 34456754332 347889999999999988 77665553 32 0
Q ss_pred hhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCcc
Q 002111 723 VERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM 802 (965)
Q Consensus 723 ~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~ 802 (965)
..++++.|...+ .....+-+++.... + +|+|+..|.-.....++.+||+....|. .
T Consensus 320 --------~~~l~ivG~g~~--~~~~~l~~~~~~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~ 375 (485)
T 1rzu_A 320 --------GGRLVVLGAGDV--ALEGALLAAASRHH----------G--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--F 375 (485)
T ss_dssp --------TCEEEEEECBCH--HHHHHHHHHHHHTT----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--C
T ss_pred --------CceEEEEeCCch--HHHHHHHHHHHhCC----------C--cEEEecCCCHHHHHHHHhcCCEEEECcc--c
Confidence 347888887422 12233444443322 2 6887777876666788999999998877 6
Q ss_pred ccCCCccchhhcccceEeeecccccccccccc-------cccceEeeccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 002111 803 EASGTSNMKFAMNGCILIGTLDGANVEIRQEV-------GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 875 (965)
Q Consensus 803 EASGTSnMKfamNGal~lgTlDGanvEI~e~v-------g~eN~fiFG~~~~ev~~l~~~~~~~~~~~~~~l~~v~d~i~ 875 (965)
|..|.+-+-+|.-|++.|+|-.|...|+.++. +.+|+++|...
T Consensus 376 E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~------------------------------ 425 (485)
T 1rzu_A 376 EPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV------------------------------ 425 (485)
T ss_dssp CSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC------------------------------
T ss_pred CCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCC------------------------------
Confidence 99999999999999999999888888876442 11566666321
Q ss_pred cCCCCcccHHHHHHhhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHH
Q 002111 876 SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 954 (965)
Q Consensus 876 ~g~f~~~~f~~l~~~L~~~~~~~~~D~y~v~~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~ 954 (965)
+.++|.+.|. ++...|.|++.|.+|.....+ -.||.+++.++|.+
T Consensus 426 -------d~~~la~~i~-------------------------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ 470 (485)
T 1rzu_A 426 -------TLDGLKQAIR-------------------------RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAA 470 (485)
T ss_dssp -------SHHHHHHHHH-------------------------HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHH
T ss_pred -------CHHHHHHHHH-------------------------HHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHH
Confidence 2233333332 333345678888877766543 68999999998865
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.91 E-value=0.0067 Score=65.03 Aligned_cols=135 Identities=16% Similarity=0.081 Sum_probs=93.2
Q ss_pred HHHhCCcCCCCcceeccccccc-ccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHH
Q 002111 677 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 755 (965)
Q Consensus 677 ~~~~g~~ldpdslfdvq~KR~h-eYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~ 755 (965)
+++.| ++++ ...+++=|+. .+|...+ ++..+.+ +++ ... ..+..+++.|...+.| ...+-+++.
T Consensus 243 ~~~~~--~~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~g~~~~--~~~l~~~~~ 307 (439)
T 3fro_A 243 LSKFG--MDEG-VTFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 307 (439)
T ss_dssp HHHHT--CCSC-EEEEEECCSSCTTBCHHH-HHHHHHH---HHT-SGG-----GGGEEEEEECCCCHHH--HHHHHHHHH
T ss_pred HHHcC--CCCC-cEEEEEcccccccccHHH-HHHHHHH---HHh-ccc-----CCCeEEEEEcCCChhH--HHHHHHHHh
Confidence 34455 3666 8899999999 9999887 6665554 443 100 1356888999654221 233333333
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 002111 756 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 835 (965)
Q Consensus 756 ~va~~iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg 835 (965)
+.. + .|+|..-+.-+-...++.+||+....|.. |..|.+-+-+|.-|++.|+|-.|..-|+.+
T Consensus 308 ~~~----------~--~~~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~--- 370 (439)
T 3fro_A 308 KHG----------N--VKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIIT--- 370 (439)
T ss_dssp HCT----------T--EEEECSCCCHHHHHHHHTTCSEEEECBSC--CSSCHHHHHHHHTTCEEEEESSTHHHHHCC---
T ss_pred hcC----------C--EEEEcCCCCHHHHHHHHHHCCEEEeCCCC--CCccHHHHHHHHCCCCeEEcCCCCcceeEE---
Confidence 322 1 35555546777777888999999988874 999999999999999999998888877664
Q ss_pred ccceEeec
Q 002111 836 EENFFLFG 843 (965)
Q Consensus 836 ~eN~fiFG 843 (965)
+.++++|.
T Consensus 371 ~~~g~~~~ 378 (439)
T 3fro_A 371 NETGILVK 378 (439)
T ss_dssp TTTCEEEC
T ss_pred cCceEEeC
Confidence 23777775
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=96.76 E-value=0.0086 Score=64.74 Aligned_cols=134 Identities=19% Similarity=0.144 Sum_probs=92.9
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHH-HHHHHHHHHHhhhhc
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA-KRIVKFITDVGATVN 762 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~a-K~IIk~I~~va~~iN 762 (965)
++++....+++=|++.+|...+ ++..+.+ +++.. .+..+++.|.....+... ..+-+++...+
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~~~--------~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~---- 290 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFD-VIEIYRK---VKEKI--------PGVQLLLVGVMAHDDPEGWIYFEKTLRKIG---- 290 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHH-HHHHHHH---HHHHC--------TTCEEEEEECCCTTCHHHHHHHHHHHHHHT----
T ss_pred CCCCCcEEEEEeccccccCHHH-HHHHHHH---HHHhC--------CCeEEEEEecCcccchhHHHHHHHHHHHhC----
Confidence 4577888899999999999887 6665544 43211 235788888765433222 23333333333
Q ss_pred CCcCCCCcceEEEec---CCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccce
Q 002111 763 HDPEIGDLLKVIFVP---DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 839 (965)
Q Consensus 763 ~Dp~i~~~LKVVFle---nYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~ 839 (965)
+.+ +|.|+. +++-.-...++.+||+....|. .|..|+.-+-+|.-|++.|+|--|...|+.+.. +++
T Consensus 291 ----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~--~~g 360 (416)
T 2x6q_A 291 ----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG--ETG 360 (416)
T ss_dssp ----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT--TTE
T ss_pred ----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecC--CCe
Confidence 123 588865 4444455668899999988777 599999999999999999999888888776543 688
Q ss_pred Eeec
Q 002111 840 FLFG 843 (965)
Q Consensus 840 fiFG 843 (965)
+++.
T Consensus 361 ~l~~ 364 (416)
T 2x6q_A 361 FLVR 364 (416)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8886
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.73 E-value=0.0053 Score=74.92 Aligned_cols=144 Identities=12% Similarity=0.052 Sum_probs=100.0
Q ss_pred HhCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC---CcHHHHHHHHHHH
Q 002111 679 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFIT 755 (965)
Q Consensus 679 ~~g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P---~y~~aK~IIk~I~ 755 (965)
..|...+++....+++=|+..+|...+ ++..+.++.+.. + ...+++.|...+ .+...+...+.+.
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~--------~v~LvIvG~g~~~~~~~~e~~~~~~~L~ 630 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E--------LANLVVVGGDRRKESKDNEEKAEMKKMY 630 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H--------HCEEEEECCCTTSCCCCHHHHHHHHHHH
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC---C--------CeEEEEEeCCCcccccchhhHHHHHHHH
Confidence 356656888999999999999999988 776655543321 1 246777776552 2333333444444
Q ss_pred HHhhhhcCCcCCCCcceEEEec---CC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 002111 756 DVGATVNHDPEIGDLLKVIFVP---DY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 830 (965)
Q Consensus 756 ~va~~iN~Dp~i~~~LKVVFle---nY--nVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI 830 (965)
..++.. .+.+ +|.|+. |+ .-.+.+.+-.++|+..+.|. .|+.|.+-+-+|.-|++.|+|-.|...|+
T Consensus 631 ~li~~l----gL~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~Ei 702 (816)
T 3s28_A 631 DLIEEY----KLNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEI 702 (816)
T ss_dssp HHHHHT----TCBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHH
T ss_pred HHHHHc----CCCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHH
Confidence 444322 2334 788886 22 13355566668999999876 59999999999999999999999999988
Q ss_pred cccccccceEeecc
Q 002111 831 RQEVGEENFFLFGA 844 (965)
Q Consensus 831 ~e~vg~eN~fiFG~ 844 (965)
.+.. +|+++|..
T Consensus 703 V~dg--~~Gllv~p 714 (816)
T 3s28_A 703 IVHG--KSGFHIDP 714 (816)
T ss_dssp CCBT--TTBEEECT
T ss_pred HccC--CcEEEeCC
Confidence 7543 78888864
No 12
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.53 E-value=0.017 Score=61.05 Aligned_cols=129 Identities=12% Similarity=0.088 Sum_probs=91.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|+..+|+..+ ++..+.+ +++.. ....+++.|.. |. ...+-+++..+.
T Consensus 194 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~~~~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 252 (394)
T 3okp_A 194 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQ---VIAAR--------PDAQLLIVGSG-RY---ESTLRRLATDVS----- 252 (394)
T ss_dssp CCTTCCEEEEESCSCGGGCHHH-HHHHHHH---HHHHS--------TTCEEEEECCC-TT---HHHHHHHTGGGG-----
T ss_pred CCcCceEEEEEeccccccCHHH-HHHHHHH---HHhhC--------CCeEEEEEcCc-hH---HHHHHHHHhccc-----
Confidence 5677788999999999999887 7665554 33201 13567788853 21 123333332221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCc-----cccCCCccchhhcccceEeeecccccccccccccccc
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG-----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 838 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag-----~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN 838 (965)
+ +|.|+....-+-...++..||+....|..+ .|..|++-+-+|.-|++.|+|--|...|+.++ .|
T Consensus 253 -----~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---~~ 322 (394)
T 3okp_A 253 -----Q--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---AT 322 (394)
T ss_dssp -----G--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT---TT
T ss_pred -----C--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc---CC
Confidence 2 699998865566667889999999988873 49999999999999999999988888877643 27
Q ss_pred eEeec
Q 002111 839 FFLFG 843 (965)
Q Consensus 839 ~fiFG 843 (965)
++++.
T Consensus 323 g~~~~ 327 (394)
T 3okp_A 323 GLVVE 327 (394)
T ss_dssp EEECC
T ss_pred ceEeC
Confidence 77775
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.39 E-value=0.018 Score=62.10 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=86.2
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCC--cHHHHHHHHHHHHHhhhhcCC
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFAT--YVQAKRIVKFITDVGATVNHD 764 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~--y~~aK~IIk~I~~va~~iN~D 764 (965)
+....+++=|+..+|...+ ++..+.++.+- .| +..+++.|...+. |..-+.+-+++.+.+
T Consensus 183 ~~~~il~vGr~~~~Kg~~~-li~a~~~l~~~---~~--------~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~------ 244 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDI-YVLAAARFISK---YP--------DAKVRFLCNSHHESKFDLHSIALRELVASG------ 244 (413)
T ss_dssp TSEEEECCSCSSGGGTHHH-HHHHHHHHHHH---CT--------TCCEEEEEECCTTCSCCHHHHHHHHHHHHT------
T ss_pred CceEEEEcCCCchhcCcHH-HHHHHHHHHHh---CC--------CcEEEEEeCCcccchhhHHHHHHHHHHHcC------
Confidence 7888999999999999988 77666654221 21 3457777765443 333355555555443
Q ss_pred cCCCCc----ceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 002111 765 PEIGDL----LKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 833 (965)
Q Consensus 765 p~i~~~----LKVVFlenY-nVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~ 833 (965)
+.++ -+||++..| +-+-...++.+||+....|. .|..|.+-+-+|.-|++.|+|--|...|+.++
T Consensus 245 --l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 314 (413)
T 3oy2_A 245 --VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314 (413)
T ss_dssp --CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT
T ss_pred --cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc
Confidence 2221 025665554 33344557899999999776 69999999999999999999988888776643
No 14
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.27 E-value=0.0081 Score=58.13 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=95.6
Q ss_pred CCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhh
Q 002111 681 GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGAT 760 (965)
Q Consensus 681 g~~ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~ 760 (965)
+..++++..+.+++-|+..+|+..+ ++..+.+ +. ...+++.|..... ..+.+++.+...
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~------------~~~l~i~G~~~~~----~~l~~~~~~~~~- 74 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKK---LQ------------DEKLYIVGWFSKG----DHAERYARKIMK- 74 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHH---CT------------TSCEEEEBCCCTT----STHHHHHHHHHH-
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHh---CC------------CcEEEEEecCccH----HHHHHHHHhhhc-
Confidence 4667888888999999999999877 5544333 21 2357777754332 234444442211
Q ss_pred hcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceE
Q 002111 761 VNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 840 (965)
Q Consensus 761 iN~Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~f 840 (965)
.+.+ +|.|+...+-+-...++.+||+....|. .|..|++-+-+|.-|++.|+|-.|...|+.+.. .+++
T Consensus 75 -----~l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~ 143 (177)
T 2f9f_A 75 -----IAPD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINE--KTGY 143 (177)
T ss_dssp -----HSCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT--TTEE
T ss_pred -----ccCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC--CccE
Confidence 1222 6889887766667788899999998776 789999999999999999999888888876543 6888
Q ss_pred eeccchhh
Q 002111 841 LFGARAHE 848 (965)
Q Consensus 841 iFG~~~~e 848 (965)
+|..+.++
T Consensus 144 ~~~~d~~~ 151 (177)
T 2f9f_A 144 LVNADVNE 151 (177)
T ss_dssp EECSCHHH
T ss_pred EeCCCHHH
Confidence 88333333
No 15
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.20 E-value=0.018 Score=62.43 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=93.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|+...|...+ ++..+.+ +++..|. ....+++.|...+.....+.+.+++.+.+
T Consensus 239 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~~~~p~------~~~~l~i~G~~~~~g~~~~~l~~~~~~~~----- 303 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQPFKGPQV-LIKAVAA---LFDRDPD------RNLRVIICGGPSGPNATPDTYRHMAEELG----- 303 (438)
T ss_dssp CCSSSEEEEEESCBSGGGCHHH-HHHHHHH---HHHHCTT------CSEEEEEECCBC------CHHHHHHHHTT-----
T ss_pred CCCCCcEEEEEeeecccCCHHH-HHHHHHH---HHhhCCC------cceEEEEEeCCCCCCcHHHHHHHHHHHcC-----
Confidence 4567788899999999999887 6655544 3321111 13578888874332223344555554433
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+.+ +|.|+....-+-...++.+||+....|. .|..|++-+-+|.-|++.|+|--|...|+.++. +|++++.
T Consensus 304 ---l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 374 (438)
T 3c48_A 304 ---VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG--ETGLLVD 374 (438)
T ss_dssp ---CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT--TTEEEES
T ss_pred ---CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC--CcEEECC
Confidence 223 6889887654556677899999988775 589999999999999999999888888876543 6788875
Q ss_pred c
Q 002111 844 A 844 (965)
Q Consensus 844 ~ 844 (965)
.
T Consensus 375 ~ 375 (438)
T 3c48_A 375 G 375 (438)
T ss_dssp S
T ss_pred C
Confidence 3
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.17 E-value=0.012 Score=56.90 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=91.5
Q ss_pred HHHhCCcCCCCcceeccccccc-ccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHH
Q 002111 677 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 755 (965)
Q Consensus 677 ~~~~g~~ldpdslfdvq~KR~h-eYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~ 755 (965)
+++.|.. ++. +.+++-|++ .+|...+ ++..+.+ ++. +.. ..+..+++.|...|.+ .+.+.+++.
T Consensus 28 r~~~~~~--~~~-~i~~~G~~~~~~K~~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~~~~~~--~~~l~~~~~ 92 (200)
T 2bfw_A 28 LSKFGMD--EGV-TFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 92 (200)
T ss_dssp HHHTTCC--SCE-EEEEESCBCSSSSCHHH-HHHHHHH---HTT-SGG-----GGGEEEEEECCBCHHH--HHHHHHHHH
T ss_pred HHHcCCC--CCC-EEEEeeccccccCCHHH-HHHHHHH---HHh-hcc-----CCCeEEEEECCCChHH--HHHHHHHHH
Confidence 3455643 333 777889999 9998877 6655443 430 001 1256788888754422 233444443
Q ss_pred HHhhhhcCCcCCCCcceEEE-ecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc
Q 002111 756 DVGATVNHDPEIGDLLKVIF-VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 834 (965)
Q Consensus 756 ~va~~iN~Dp~i~~~LKVVF-lenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~v 834 (965)
... +|.| +...+-+-...++..||+....|.. |..|++-+-+|..|++.|+|--|...|+.
T Consensus 93 ~~~-------------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 93 KHG-------------NVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HCT-------------TEEEECSCCCHHHHHHHHTTCSEEEECCSC--CSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred hcC-------------CEEEEeccCCHHHHHHHHHHCCEEEECCCC--CCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 222 5889 7766555667788999999997764 99999999999999999999888877766
Q ss_pred cccceEeecc
Q 002111 835 GEENFFLFGA 844 (965)
Q Consensus 835 g~eN~fiFG~ 844 (965)
..++++++..
T Consensus 155 ~~~~g~~~~~ 164 (200)
T 2bfw_A 155 TNETGILVKA 164 (200)
T ss_dssp CTTTCEEECT
T ss_pred CCCceEEecC
Confidence 3477888753
No 17
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.01 E-value=0.025 Score=63.00 Aligned_cols=136 Identities=14% Similarity=0.074 Sum_probs=94.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecC-CC--CcH-----H---HHHHHH
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FA--TYV-----Q---AKRIVK 752 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA-~P--~y~-----~---aK~IIk 752 (965)
++++....+++=|+...|...+ ++..+.++.+- .+. ...++++|.. .| .|. . -..+.+
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~~~-------~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~ 326 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYG-LVEAYVQNKEL---QDK-------ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIE 326 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHH---HHH-------CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeecCccccCHHH-HHHHHHHHHHh---CCC-------ceEEEEECCCCCcccccccccccchHHHHHHHH
Confidence 4567778899999999999887 66655543221 111 3457777762 22 221 1 445555
Q ss_pred HHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccc
Q 002111 753 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 828 (965)
Q Consensus 753 ~I~~va~~iN~Dp~i~~~LKVVFlenYnVslAe~Lipas----Dvs~nistag~EASGTSnMKfamNGal~lgTlDGanv 828 (965)
++.+.+ +.+ +|.|+....-+-...++.+| |+-...|. .|..|.+-+=+|.-|++.|+|--|...
T Consensus 327 ~~~~~~--------l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~ 394 (499)
T 2r60_A 327 LIDNND--------CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPA 394 (499)
T ss_dssp HHHHTT--------CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHH
T ss_pred HHHhcC--------CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHH
Confidence 554443 223 69998876555666788999 99998776 499999999999999999999888888
Q ss_pred cccccccccceEeecc
Q 002111 829 EIRQEVGEENFFLFGA 844 (965)
Q Consensus 829 EI~e~vg~eN~fiFG~ 844 (965)
|+.+.. +|+++|..
T Consensus 395 e~v~~~--~~g~l~~~ 408 (499)
T 2r60_A 395 EILDGG--KYGVLVDP 408 (499)
T ss_dssp HHTGGG--TSSEEECT
T ss_pred HHhcCC--ceEEEeCC
Confidence 876543 57888853
No 18
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=95.94 E-value=0.019 Score=61.55 Aligned_cols=127 Identities=20% Similarity=0.239 Sum_probs=86.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|+..+|...+ ++..+. ++++ . .|..+++.|.. |. ...+.+++.+.+
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~---~l~~-~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 264 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQD-VVQAFA---KIVT-E--------VDAKLLLVGDG-PE---FCTILQLVKNLH----- 264 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHH-HHHHHH---HHHH-S--------SCCEEEEECCC-TT---HHHHHHHHHTTT-----
T ss_pred CCCCCeEEEEeeccccccCHHH-HHHHHH---HHHh-h--------CCCEEEEECCc-hH---HHHHHHHHHHcC-----
Confidence 3456778889999999998877 654443 3443 1 25678888853 22 234444443332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+.+ +|.|+. + ..-...++.+||+....|. .|+.|++-+-+|..|++.|+|--|...|+.++. +|+++|.
T Consensus 265 ---l~~--~v~~~g-~-~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~--~~g~~~~ 333 (394)
T 2jjm_A 265 ---IED--RVLFLG-K-QDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG--DTGYLCE 333 (394)
T ss_dssp ---CGG--GBCCCB-S-CSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT--TTEEEEC
T ss_pred ---CCC--eEEEeC-c-hhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC--CceEEeC
Confidence 122 577776 3 3334567789999998776 699999999999999999999888888876543 6788875
No 19
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=94.98 E-value=0.047 Score=57.39 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=90.7
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 002111 684 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 763 (965)
Q Consensus 684 ldpdslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~ 763 (965)
++++....+++-|++.+|...+ ++..+.+ +.+ .. ..+..+++.|.... +.+.+++.+.+
T Consensus 192 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~---l~~---~~----~~~~~l~i~G~g~~-----~~~~~~~~~~~----- 250 (374)
T 2iw1_A 192 IKEQQNLLLQVGSDFGRKGVDR-SIEALAS---LPE---SL----RHNTLLFVVGQDKP-----RKFEALAEKLG----- 250 (374)
T ss_dssp CCTTCEEEEEECSCTTTTTHHH-HHHHHHT---SCH---HH----HHTEEEEEESSSCC-----HHHHHHHHHHT-----
T ss_pred CCCCCeEEEEeccchhhcCHHH-HHHHHHH---hHh---cc----CCceEEEEEcCCCH-----HHHHHHHHHcC-----
Confidence 4567778889999999999887 6544333 221 10 01457888887421 44555555543
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 764 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 764 Dp~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
+.+ +|.|+.. .+-...++.+||+-...|. .|+.|++-+-+|.-|++.|+|--|...|+.++. ++++++.
T Consensus 251 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~ 319 (374)
T 2iw1_A 251 ---VRS--NVHFFSG--RNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA--NCGTVIA 319 (374)
T ss_dssp ---CGG--GEEEESC--CSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH--TCEEEEC
T ss_pred ---CCC--cEEECCC--cccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccC--CceEEeC
Confidence 112 6888874 3445667899999998776 599999999999999999999888888876543 6888886
No 20
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=94.54 E-value=0.091 Score=55.88 Aligned_cols=125 Identities=11% Similarity=0.073 Sum_probs=85.0
Q ss_pred Ccceecccccc-cccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 687 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 687 dslfdvq~KR~-heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
+....+++-|+ ..+|...+ ++..+. ++++ . .....+++.|... . ..+.+++.++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~---~l~~-~-------~~~~~l~i~G~~~---~--~~l~~~~~~~-------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALP---KLVA-R-------FPDVEILIVGRGD---E--DELREQAGDL-------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHH---HHHT-T-------STTCEEEEESCSC---H--HHHHHHTGGG--------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHH---HHHH-H-------CCCeEEEEEcCCc---H--HHHHHHHHhc--------
Confidence 45677888999 99999887 665443 3443 1 1245788888642 2 4455544332
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeec
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 843 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG 843 (965)
.+ +|.|+...+=.-...++.+||+-...|. ..|..|++-+-+|..|++.|+|--|...|+.++. +++++|.
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 332 (406)
T 2gek_A 262 --AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADG--DAGRLVP 332 (406)
T ss_dssp --GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTT--TSSEECC
T ss_pred --cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCC--CceEEeC
Confidence 12 6888876543334677889999988654 3688999999999999999999777777765432 5666663
No 21
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=93.15 E-value=0.13 Score=53.94 Aligned_cols=129 Identities=19% Similarity=0.128 Sum_probs=87.8
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 766 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~ 766 (965)
+..+.+++-|+...|...+ ++..+.+ + +..+++.|.. |.. ..+-+++..++
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~---~-------------~~~l~i~G~g-~~~---~~l~~~~~~~~-------- 211 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHA---C-------------GRRLVLAGPA-WEP---EYFDEITRRYG-------- 211 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHH---H-------------TCCEEEESCC-CCH---HHHHHHHHHHT--------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHh---c-------------CcEEEEEeCc-ccH---HHHHHHHHHhC--------
Confidence 3456788999999999887 6654433 2 2357777764 322 22233333332
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCC--------ccccCCCccchhhcccceEeeecccccccccccccccc
Q 002111 767 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTA--------GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 838 (965)
Q Consensus 767 i~~~LKVVFlenYnVslAe~LipasDvs~nista--------g~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN 838 (965)
+ +|.|+..-+=.-...++.+||+....|.. -.|..|++-+-+|.-|++.|+|--|...|+.++.|.++
T Consensus 212 --~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~ 287 (342)
T 2iuy_A 212 --S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVV 287 (342)
T ss_dssp --T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEEC
T ss_pred --C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCc
Confidence 2 58887765443336678899999887761 16999999999999999999999899888876633477
Q ss_pred eEeeccchhh
Q 002111 839 FFLFGARAHE 848 (965)
Q Consensus 839 ~fiFG~~~~e 848 (965)
+++|..+.++
T Consensus 288 g~~~~~d~~~ 297 (342)
T 2iuy_A 288 GYGTDFAPDE 297 (342)
T ss_dssp CSSSCCCHHH
T ss_pred eEEcCCCHHH
Confidence 8777643333
No 22
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=91.22 E-value=0.69 Score=43.24 Aligned_cols=113 Identities=19% Similarity=0.165 Sum_probs=77.6
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 768 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~ 768 (965)
+..+++=|+..+|...+ ++..+.+ +++ . .+..+++.|.. |. ...+.+++...+.
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~---l~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~~--------- 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVAL---SKY-K--------QDIVLLLKGKG-PD---EKKIKLLAQKLGV--------- 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHT---CTT-G--------GGEEEEEECCS-TT---HHHHHHHHHHHTC---------
T ss_pred eEEEEEeccchhcCHHH-HHHHHHH---hcc-C--------CCeEEEEEeCC-cc---HHHHHHHHHHcCC---------
Confidence 45678889999999887 6655444 332 1 24578888863 22 2445555544442
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccc-eEeeecc-ccccccccc
Q 002111 769 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC-ILIGTLD-GANVEIRQE 833 (965)
Q Consensus 769 ~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGa-l~lgTlD-GanvEI~e~ 833 (965)
+|.| .-.+-+-...++.+||+....|. .|..|.+-+-+|..|+ +.|+|-+ |..-|+.++
T Consensus 57 ---~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~ 117 (166)
T 3qhp_A 57 ---KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALD 117 (166)
T ss_dssp ---EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS
T ss_pred ---eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC
Confidence 4665 44444556678899999998777 6999999999999998 9999654 555565543
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=85.33 E-value=6.8 Score=44.11 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=68.4
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC-
Q 002111 690 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG- 768 (965)
Q Consensus 690 fdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~- 768 (965)
+.+++-|+.. |.... ++..+.+ |++-.| ...+++.|..-| .-..+.+++...+ +.
T Consensus 378 ~v~~~g~~~~-K~~~~-li~a~~~---l~~~~~--------~~~l~i~G~~g~---~~~~l~~~~~~~~--------l~~ 433 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQ-SMARMLA---VLREVP--------DSVLWLLSGPGE---ADARLRAFAHAQG--------VDA 433 (568)
T ss_dssp CEEEECCCGG-GCCHH-HHHHHHH---HHHHCT--------TCEEEEECCSTT---HHHHHHHHHHHTT--------CCG
T ss_pred EEEEeCCccc-cCCHH-HHHHHHH---HHHhCC--------CcEEEEecCCHH---HHHHHHHHHHHcC--------CCh
Confidence 3448888888 98877 6655544 432121 346777775222 2344555554433 22
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeee
Q 002111 769 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 822 (965)
Q Consensus 769 ~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgT 822 (965)
+ +|+|+.--+-.-...++.+|||....|.. ..|++-+=+|.-|++.|+.
T Consensus 434 ~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pvv~~ 482 (568)
T 2vsy_A 434 Q--RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPVLTT 482 (568)
T ss_dssp G--GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBC
T ss_pred h--HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCEEec
Confidence 3 69999864433445678999999988775 7899999999999999994
No 24
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=79.62 E-value=10 Score=43.30 Aligned_cols=141 Identities=7% Similarity=0.011 Sum_probs=84.3
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcH-HHHHHHHHHHHHhhhhcCCc
Q 002111 687 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 687 dslfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~-~aK~IIk~I~~va~~iN~Dp 765 (965)
+..+++++-|+...|.... +|.-+.++.+ + .|.-+ ..+++|..|....++. .-.++-+.+.+++..||..-
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~----~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~ 325 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH----GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 325 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT----TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHH--h-Ccccc----CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhc
Confidence 3557789999999999887 7776666522 2 44322 2456776665432321 12234445555554444211
Q ss_pred CCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhccc------ceEeeecccccccccccccccc
Q 002111 766 EIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNG------CILIGTLDGANVEIRQEVGEEN 838 (965)
Q Consensus 766 ~i~~~LKVVFlen-YnVslAe~LipasDvs~nistag~EASGTSnMKfamNG------al~lgTlDGanvEI~e~vg~eN 838 (965)
...+.-.|+|+.. ..-+--..++.+|||-...|+ .|.-|..-+-+|.-| .+.+|+..|+..|+ ++
T Consensus 326 g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l------~~ 397 (482)
T 1uqt_A 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TS 397 (482)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC------TT
T ss_pred ccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh------CC
Confidence 1112225887653 334444478899999999887 476666666666655 56777777876665 26
Q ss_pred eEeec
Q 002111 839 FFLFG 843 (965)
Q Consensus 839 ~fiFG 843 (965)
++++-
T Consensus 398 g~lv~ 402 (482)
T 1uqt_A 398 ALIVN 402 (482)
T ss_dssp SEEEC
T ss_pred eEEEC
Confidence 67764
No 25
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=78.57 E-value=17 Score=38.33 Aligned_cols=66 Identities=17% Similarity=0.051 Sum_probs=44.0
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceEeeccchh
Q 002111 772 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGARAH 847 (965)
Q Consensus 772 KVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlD-GanvEI~e~vg~eN~fiFG~~~~ 847 (965)
+|.|+..-.-.-...++.+||+-..-| |+.-+=+|.-|.+.|.|-. |...|+.+. .+++++..+.+
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d~~ 330 (384)
T 1vgv_A 264 NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTDKQ 330 (384)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSSHH
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCCHH
Confidence 588864322234456779999977544 4557789999999999976 666665422 27777754333
No 26
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=77.19 E-value=6.5 Score=41.26 Aligned_cols=66 Identities=15% Similarity=0.055 Sum_probs=44.0
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceEeeccchh
Q 002111 772 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGARAH 847 (965)
Q Consensus 772 KVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlD-GanvEI~e~vg~eN~fiFG~~~~ 847 (965)
+|.|+....-.-...++.+||+-..-| |+.-+=+|.-|.+.|+|-+ |...|+.+ ..+++++..+.+
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~---~g~g~~v~~d~~ 330 (375)
T 3beo_A 264 RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIE---AGTLKLAGTDEE 330 (375)
T ss_dssp TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHH---TTSEEECCSCHH
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeec---CCceEEcCCCHH
Confidence 588865443334456778999987543 4446679999999999966 66666542 237777754433
No 27
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=55.64 E-value=42 Score=37.06 Aligned_cols=123 Identities=11% Similarity=0.028 Sum_probs=76.7
Q ss_pred Ccceecccccc-cccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 002111 687 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 765 (965)
Q Consensus 687 dslfdvq~KR~-heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp 765 (965)
+..+.+++=|+ .+.|...+ ++..+.+ +++..|.. .+..++++|...... + .
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~-li~A~~~---l~~~~~~~-----~~~~l~ivG~~~~~~--------------~-l---- 291 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTL-IVEALKI---FVQKYDRS-----NEWKIISVGEKHKDI--------------A-L---- 291 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHH-HHHHHHH---HHHHCTTG-----GGCEEEEEESCCCCE--------------E-E----
T ss_pred CCCEEEEEecCchhccCHHH-HHHHHHH---HHHhCCCC-----CceEEEEEcCCchhh--------------h-c----
Confidence 33445566675 56777665 5555544 33212110 024677777643320 0 0
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeecc
Q 002111 766 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 844 (965)
Q Consensus 766 ~i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDGanvEI~e~vg~eN~fiFG~ 844 (965)
.+. -+|.|+.--.-+--..++.+||+....|. .|.-|..-+=+|.-|++.|++- |...|+.++ ++|++++-.
T Consensus 292 ~~~--~~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~--~~~G~lv~~ 363 (413)
T 2x0d_A 292 GKG--IHLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNK-YENKDLSNW--HSNIVSLEQ 363 (413)
T ss_dssp ETT--EEEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGT--BTTEEEESS
T ss_pred CCc--CcEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeC-CCcchhhhc--CCCEEEeCC
Confidence 112 27899876555555567899999988876 3666777789999999999974 445677654 378998863
No 28
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=48.63 E-value=37 Score=35.35 Aligned_cols=99 Identities=7% Similarity=-0.065 Sum_probs=60.0
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 768 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~ 768 (965)
.+.+.+.|+...|...+ ++..+.+ +++ . -+.++++|... + +++.+++.+.+ +
T Consensus 185 ~il~~~g~~~~~k~~~~-li~a~~~---l~~-----~-----~~~l~i~G~~~--~---~~l~~~~~~~~--------~- 236 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQT-MPQVAAK---LGD-----S-----VTIWHQSGKGS--Q---QSVEQAYAEAG--------Q- 236 (364)
T ss_dssp EEEEECTTTCCHHHHHH-HHHHHHH---HGG-----G-----EEEEEECCTTC--H---HHHHHHHHHTT--------C-
T ss_pred EEEEEcCchHhHHHHHH-HHHHHHH---hcC-----C-----cEEEEEcCCch--H---HHHHHHHhhcC--------C-
Confidence 34556788888887665 4444333 321 1 12356777654 1 34444443332 1
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 002111 769 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 825 (965)
Q Consensus 769 ~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfamNGal~lgTlDG 825 (965)
+ +|.|+..- .-...++.+||+-...| | |++-+-+|.-|++.|+|--|
T Consensus 237 ~--~v~~~g~~--~~~~~~~~~ad~~v~~s--g----~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 237 P--QHKVTEFI--DDMAAAYAWADVVVCRS--G----ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp T--TSEEESCC--SCHHHHHHHCSEEEECC--C----HHHHHHHHHHTCCEEECCCC
T ss_pred C--ceEEecch--hhHHHHHHhCCEEEECC--c----hHHHHHHHHhCCCEEEeeCC
Confidence 1 47777653 33456788999988765 2 56667799999999999544
No 29
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=37.25 E-value=1.1e+02 Score=35.40 Aligned_cols=136 Identities=13% Similarity=0.051 Sum_probs=80.2
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcH-HHHHHHHHHHHHhhhhcCCcC
Q 002111 688 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDPE 766 (965)
Q Consensus 688 slfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~-~aK~IIk~I~~va~~iN~Dp~ 766 (965)
.-++.++-|+...|-... +|.-. ++ +++ .|.- .-+++|..|....++. .-..+-+.|.+++.-||..-
T Consensus 281 ~~lIl~VgRLd~~KGi~~-lL~Af-~l--l~~-~P~~-----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~- 349 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKNAER-AVRAF-VL--AAR-GGGL-----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL- 349 (496)
T ss_dssp SEEEEEEEESSGGGCHHH-HHHHH-HH--HHH-TSSC-----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ceEEEEcccCccccCHHH-HHHHH-HH--HHh-Cccc-----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc-
Confidence 456778999999998776 66555 44 222 3331 1245665554443332 23345555666665555210
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc----ccceEeeecccccccccccccccceEee
Q 002111 767 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM----NGCILIGTLDGANVEIRQEVGEENFFLF 842 (965)
Q Consensus 767 i~~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfam----NGal~lgTlDGanvEI~e~vg~eN~fiF 842 (965)
+ ..+|+|+..-+..---.+..+|||-..+|++ |-=|.--+-+|. .|.+.+|..-|+-.|+. ++++++
T Consensus 350 -g-~~~V~f~g~v~~~el~aly~~ADv~vv~Slr--EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-----~~allV 420 (496)
T 3t5t_A 350 -G-SDTVRIDNDNDVNHTIACFRRADLLIFNSTV--DGQNLSTFEAPLVNERDADVILSETCGAAEVLG-----EYCRSV 420 (496)
T ss_dssp -C-TTSEEEEECCCHHHHHHHHHHCSEEEECCSS--BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-----GGSEEE
T ss_pred -C-CcCEEEeCCCCHHHHHHHHHhccEEEECccc--ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-----CCEEEE
Confidence 0 1168888643444445688999998888875 434444444333 47899998888876652 356666
Q ss_pred c
Q 002111 843 G 843 (965)
Q Consensus 843 G 843 (965)
-
T Consensus 421 n 421 (496)
T 3t5t_A 421 N 421 (496)
T ss_dssp C
T ss_pred C
Confidence 4
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=33.12 E-value=1.2e+02 Score=32.92 Aligned_cols=105 Identities=12% Similarity=0.062 Sum_probs=70.8
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 002111 689 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 768 (965)
Q Consensus 689 lfdvq~KR~heYKRqlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFaGKA~P~y~~aK~IIk~I~~va~~iN~Dp~i~ 768 (965)
...+++=|+..+|.. +..+++.. ....+++.|.. | + .+..+.
T Consensus 223 ~~i~~vGrl~~~Kg~----------~~~l~~~~--------~~~~l~ivG~g-~---------------~----~~~~l~ 264 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----------FVVASKAF--------PQVTFHVIGSG-M---------------G----RHPGYG 264 (406)
T ss_dssp EEEEEECCTTBCHHH----------HHHHHHHC--------TTEEEEEESCS-S---------------C----CCTTCC
T ss_pred cEEEEEeccccccCH----------HHHHHHhC--------CCeEEEEEeCc-h---------------H----HhcCCC
Confidence 567888999999987 22232211 13578888853 2 1 122344
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhh-------cccceEeeecccccccccccccccceEe
Q 002111 769 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFA-------MNGCILIGTLDGANVEIRQEVGEENFFL 841 (965)
Q Consensus 769 ~~LKVVFlenYnVslAe~LipasDvs~nistag~EASGTSnMKfa-------mNGal~lgTlDGanvEI~e~vg~eN~fi 841 (965)
+ +|.|+.--.-+-...++.+||+...-|. .|..|..-+-+| .-|.+.|+| |. | . +++|+++
T Consensus 265 ~--~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas-~~--v--~---~~~~G~l 332 (406)
T 2hy7_A 265 D--NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCP-NA--V--V---GPYKSRF 332 (406)
T ss_dssp T--TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEE-GG--G--T---CSCSSEE
T ss_pred C--CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEe-hh--c--c---cCcceEE
Confidence 4 6999876544444567899999998776 588888888888 999999999 33 2 2 3467777
Q ss_pred -ec
Q 002111 842 -FG 843 (965)
Q Consensus 842 -FG 843 (965)
+-
T Consensus 333 ~v~ 335 (406)
T 2hy7_A 333 GYT 335 (406)
T ss_dssp EEC
T ss_pred EeC
Confidence 64
No 31
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=30.85 E-value=3.8e+02 Score=31.02 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHhHhcCCcEEEEEehhhhhhhhhHHHHhhcCch----------H----HHHHHHHHc----------C
Q 002111 126 DSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGLT----------G----AYAEALSKL----------G 181 (965)
Q Consensus 126 D~l~~~W~~T~~~~~~~~~K~vyYlSmEFL~GR~L~nnL~NLgl~----------~----~~~eaL~~l----------G 181 (965)
.++.+.-.+++.+ ...|+|..+- +=..-.+|...|..||+. . .+++.|.++ |
T Consensus 349 ~r~~~~l~d~~~~---l~GKrvaI~g-d~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~ 424 (523)
T 3u7q_B 349 GRLVDMMTDSHTW---LHGKRFALWG-DPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIG 424 (523)
T ss_dssp HHHHHHHHHHHHH---HTTCEEEEEC-SHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEES
T ss_pred HHHHHHHHHHHHh---cCCCEEEEEC-CchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEEC
Confidence 3343433444433 3468888874 333333455556678753 2 234555542 4
Q ss_pred CChHHHhc----cCCCCCCCCCCchhchhhhHhhhhccCCCeEEEe
Q 002111 182 QSLENVVS----QEPDAALGNGGLGRLASCFLDSMATLNYPAWGYG 223 (965)
Q Consensus 182 ~~le~l~~----~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyG 223 (965)
-|+.++.+ ..||.-+||+---.+|-..+-++..||+|++-+|
T Consensus 425 ~D~~~l~~~i~~~~pDLlig~s~~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 425 KDLWHLRSLVFTDKPDFMIGNSYGKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp CCHHHHHHHHHHTCCSEEEECTTHHHHHHHHHHHCGGGCCCEEECS
T ss_pred CCHHHHHHHHHhcCCCEEEECccHHHHHHHhhcccccCCCceEEec
Confidence 46776664 5799999998655677777788899999998766
No 32
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=21.10 E-value=89 Score=29.99 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=31.5
Q ss_pred CCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHhccc
Q 002111 393 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 433 (965)
Q Consensus 393 ~kvaihlNDtH---palai~ELmRiL~D~~gl~w~eAw~it~~t 433 (965)
.+|.||..-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 57899999998 7888888876 4699999999998764
No 33
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=20.19 E-value=1e+02 Score=28.59 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=30.9
Q ss_pred CCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHhccc
Q 002111 393 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 433 (965)
Q Consensus 393 ~kvaihlNDtH---palai~ELmRiL~D~~gl~w~eAw~it~~t 433 (965)
.++.||..-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 57899999998 7888887776 4599999999987764
Done!