RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 002111
         (965 letters)



>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 876

 Score =  880 bits (2275), Expect = 0.0
 Identities = 381/908 (41%), Positives = 517/908 (56%), Gaps = 102/908 (11%)

Query: 88  DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
                      H E T   S    +   A+ A + S+RD+L+I+WN T + +   + K+ 
Sbjct: 37  KAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRV 96

Query: 148 YYLSMEFLQGRALLNAIGNLGLTGA-------------YAEALSKLGQSLENVVSQEPDA 194
           YYLS+EFL GRAL NA+ N+ +                   AL +LG  LE+V+ QEPDA
Sbjct: 97  YYLSLEFLMGRALDNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDA 156

Query: 195 ALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPW 254
            LGNGGLGRLA+CF+DSMAT   PAWGYGLRY+YG+F Q+I    Q E  + WL  GNPW
Sbjct: 157 GLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPW 216

Query: 255 EIERNDVSYPVKFYGKIVPGSDGK-----SHWIGGEDIKAVAYDIPIPGYKTKTTINLRL 309
           EIERN+V  PV FYG +     GK     S WIGGE + AVAYD P+PG+KT    NLRL
Sbjct: 217 EIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLRL 276

Query: 310 WSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSA 369
           W    P+ +FDL+ FN GD+  +      AE I  +LYP D   +GK LRLKQQY  C+A
Sbjct: 277 WQAR-PTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAA 335

Query: 370 SLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNI 429
           SL DI+ RF+K       W EFP++VA+Q+NDTHPTL I EL R+L+DL+ L W EAW+I
Sbjct: 336 SLHDILRRFKKSKR---PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDI 392

Query: 430 TQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLE 489
             +T AYTNHTV+ EAL                   E     L   ++  +     D+  
Sbjct: 393 VTKTFAYTNHTVMQEAL-------------------EKWPRRLFGHLLPRHLEIIYDINW 433

Query: 490 KRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVL 549
             L++                                     +  P D +L S     ++
Sbjct: 434 FFLEDVA-----------------------------------KKFPKDVDLLSRI--SII 456

Query: 550 EEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLW-PEKFQNK 608
           EE         P + +RMA L +VGSH VNGV E+HSE++   +F +F K + P KF N 
Sbjct: 457 EENS-------PERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNV 509

Query: 609 TNGVTPRRWIRFCNPDLSSILTSWLG--TEDWVTNTGKLAELRKFADNEDLQSQFRAAKR 666
           TNG+TPRRW++  NP L+ +++  L   TE+++ +  KL +L K+ ++++   ++   K 
Sbjct: 510 TNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKL 569

Query: 667 NNKMKVVSFIKEKT------GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEM 720
           NNK+++V  IK++             D +FD+QVKRIHEYKRQ +N+ GI+YRY  MK M
Sbjct: 570 NNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNM 629

Query: 721 -----SAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIF 775
                S  E   K+  +V IFGGK+   Y  AK I+K I  V   VN+D  I  LLKV+F
Sbjct: 630 LKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVF 689

Query: 776 VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 835
           V DYNVS AE++IPAS+LS+HISTAG EASGTSNMKF MNG ++IGT+DGANVEI +E+G
Sbjct: 690 VADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 749

Query: 836 EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNE 895
           E+N FLFG  +  +  LR           +  + V  +++SG F   N +E    ++  +
Sbjct: 750 EDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIK 809

Query: 896 GFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQEYAR 954
             G  DY+LV  DF SYL   E VD+ + +Q+  W + S+++ A    FSSDR I+EY+ 
Sbjct: 810 YHG--DYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSD 867

Query: 955 DIWNIIPV 962
            IWN+ PV
Sbjct: 868 TIWNVEPV 875


>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit
           (Oryctolagus cuniculus) [TaxId: 9986]}
          Length = 824

 Score =  822 bits (2125), Expect = 0.0
 Identities = 344/891 (38%), Positives = 492/891 (55%), Gaps = 93/891 (10%)

Query: 88  DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
           +   +  +   H  FT +       P   +FA A +VRD L+  W  T ++Y   + K+ 
Sbjct: 12  NVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRI 71

Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASC 207
           YYLS+EF  GR L N + NL L  A  EA  +LG  +E +   E DA LGNGGLGRLA+C
Sbjct: 72  YYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAAC 131

Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
           FLDSMATL   A+GYG+RY++G+F Q+I    Q E A+DWL  GNPWE  R + + PV F
Sbjct: 132 FLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHF 191

Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
           YG++   S   + W+  + + A+ YD P+PGY+      +RLWS      DF+L  FN G
Sbjct: 192 YGRVEHTSQ-GAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWS-AKAPNDFNLKDFNVG 249

Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RS 382
            + +A      AE I  +LYP D   EGK LRLKQ+Y + +A+LQDII RF+      R 
Sbjct: 250 GYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRD 309

Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
               N++ FP+KVA+Q+NDTHP+L IPEL+R+L+DL+ L W                   
Sbjct: 310 PVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDW------------------- 350

Query: 443 PEALEKW--SFELMQKLLPRHMEIIEMIDEELVHTIVSE-YGTADPDLLEKRLKETRILE 499
            +A E    +                       HT++ E        LLE  L   R L+
Sbjct: 351 DKAWEVTVKTCAYT------------------NHTVLPEALERWPVHLLETLL--PRHLQ 390

Query: 500 NVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEEKEAEAVQ 559
            +                     +    N      P D +             + +   +
Sbjct: 391 IIYEI------------------NQRFLNRVAAAFPGDVDRL----------RRMSLVEE 422

Query: 560 EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIR 619
              + + MA+LC+ GSHAVNGVA IHSEI+   +F +FY+L P KFQNKTNG+TPRRW+ 
Sbjct: 423 GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLV 482

Query: 620 FCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEK 679
            CNP L+ I+   +G E+++++  +L +L  + D+E         K+ NK+K  ++++ +
Sbjct: 483 LCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLERE 541

Query: 680 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK 739
               ++P+++FD+QVKRIHEYKRQL+N L ++  Y ++K+          VPR  + GGK
Sbjct: 542 YKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNK----FVVPRTVMIGGK 597

Query: 740 AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 799
           A   Y  AK I+K IT +G  VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ IST
Sbjct: 598 AAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 657

Query: 800 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RS 857
           AG EASGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R  ++  L +    +
Sbjct: 658 AGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNA 717

Query: 858 EGKFVPDARFEEVKKFVKSGVFGSYNYD---ELMGSLEGNEGFGQADYFLVGKDFPSYLE 914
           +  +       ++ + + SG F     D   +++  L  +      D F V  D+  Y++
Sbjct: 718 QEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHH------DRFKVFADYEEYVK 771

Query: 915 CQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 965
           CQE+V   Y + + WTRM I N A S KFSSDRTI +YAR+IW + P    
Sbjct: 772 CQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQR 822


>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP)
           {Escherichia coli [TaxId: 562]}
          Length = 796

 Score =  449 bits (1156), Expect = e-145
 Identities = 186/428 (43%), Positives = 272/428 (63%), Gaps = 14/428 (3%)

Query: 537 DEELESAQEDGVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNE 596
                  ++    +E+  A+      + V MANLCVVG  AVNGVA +HS++V  ++F E
Sbjct: 376 TRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPE 435

Query: 597 FYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNED 656
           +++LWP KF N TNG+TPRRWI+ CNP L+++L   L  ++W  +  +L  L KFAD+  
Sbjct: 436 YHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQ-KEWANDLDQLINLEKFADDAK 494

Query: 657 LQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKK 716
            + Q+R  K+ NK+++  F+K +TG  ++P A+FDIQ+KR+HEYKRQ +N+L I+  YK+
Sbjct: 495 FRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKE 554

Query: 717 MKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFV 776
           ++E    +R    VPRV +FG KA   Y  AK I+  I  V   +N+DP +GD LKV+F+
Sbjct: 555 IRENPQADR----VPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFL 610

Query: 777 PDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 836
           PDY VS AE LIPA+++S+ ISTAG EASGT NMK A+NG + +GTLDGANVEI ++VGE
Sbjct: 611 PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGE 670

Query: 837 ENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFG---SYNYDELMGSL 891
           EN F+FG    ++  +  +          D   + V K ++SG +     + +D+++ S+
Sbjct: 671 ENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSI 730

Query: 892 EGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQE 951
               G    D +LV  DF +Y+E Q++VD  Y DQ+ WTR +I+NTA    FSSDR+I++
Sbjct: 731 ----GKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRD 786

Query: 952 YARDIWNI 959
           Y   IW  
Sbjct: 787 YQARIWQA 794



 Score =  412 bits (1059), Expect = e-131
 Identities = 153/403 (37%), Positives = 217/403 (53%), Gaps = 13/403 (3%)

Query: 88  DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
           +      ++    +   L S  +  P + + A ++++ + L     +        N +  
Sbjct: 6   NDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVA----NQRHV 61

Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASC 207
            Y+SMEFL GR   N + NLG      ++L     +L +++ +E D ALGNGGLGRLA+C
Sbjct: 62  NYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAAC 121

Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
           FLDSMAT+   A GYGL Y+YGLF+Q      Q E  +DW     PW      +   V  
Sbjct: 122 FLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGI 181

Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
            GK+    DG+  W     I   A+D+P+ GY+      LRLW        FDL+ FN G
Sbjct: 182 GGKVTK--DGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHA-HPFDLTKFNDG 236

Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVN 387
           D  +A +   NAEK+  +LYP D + EGK LRL QQY  C+ S+ DI+ R          
Sbjct: 237 DFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLA---GRK 293

Query: 388 WEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALE 447
             E  +   +Q+NDTHPT+ IPEL+R+LID   +SW +AW IT +T AYTNHT++PEALE
Sbjct: 294 LHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALE 353

Query: 448 KWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
           +W  +L++ LLPRHM+II  I+     T+V +    D  +  K
Sbjct: 354 RWDVKLVKGLLPRHMQIINEINTRF-KTLVEKTWPGDEKVWAK 395


>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase
           (MetRS) {Escherichia coli [TaxId: 562]}
          Length = 350

 Score = 31.4 bits (70), Expect = 0.56
 Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 9/73 (12%)

Query: 368 SASLQDIIARFEKRSGANV----NWEEFPEKV--AVQMNDTHP-TLCIPELIRILIDLKG 420
                D+  R+++  G  V      +     +    Q     P  +          D  G
Sbjct: 24  EHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAG 83

Query: 421 LSWKEAWNITQRT 433
            +    ++    T
Sbjct: 84  FNIS--YDNYHST 94


>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
           tremula), thioredoxin H [TaxId: 113636]}
          Length = 113

 Score = 28.6 bits (63), Expect = 1.3
 Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 11/103 (10%)

Query: 655 EDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRY 714
           +  +  F   K + K+ VV F    T     P  M       + +    +  +   V   
Sbjct: 13  DTWKEHFEKGKGSQKLIVVDF----TASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDEL 68

Query: 715 KKMKEMSAVERKAKFVPRVCIF-GGKAFATYV--QAKRIVKFI 754
           K + E   V    + +P       GK     V      +   +
Sbjct: 69  KAVAEEWNV----EAMPTFIFLKDGKLVDKTVGADKDGLPTLV 107


>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos
           taurus) [TaxId: 9913]}
          Length = 177

 Score = 29.3 bits (66), Expect = 1.6
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 772 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI 818
            +I  P Y +  A+   P ++L +      +   G   ++F ++   
Sbjct: 20  SIIITPGYGLCAAKAQYPIADLVKM-----LSEQGK-KVRFGIHPVA 60


>d2b0ja1 a.100.1.11 (A:243-344) 5,10-methenyltetrahydromethanopterin
           hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii
           [TaxId: 2190]}
          Length = 102

 Score = 26.7 bits (59), Expect = 4.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 802 MEASGTSNMKFAMNGCILIGTLDGANVEIRQE 833
           M+  G +NM+ A++   L+GT D        E
Sbjct: 55  MKEKGIANMEEALDPAALLGTADSMCFGPLAE 86


>d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP
           {Escherichia coli [TaxId: 562]}
          Length = 369

 Score = 28.2 bits (61), Expect = 4.9
 Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 3/32 (9%)

Query: 371 LQDIIARFEKRSGANVN---WEEFPEKVAVQM 399
           L ++  +FEK +   V     ++  EK     
Sbjct: 20  LAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVA 51


>d1jeya1 b.131.1.1 (A:254-534) Ku70 subunit middle domain {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 281

 Score = 27.9 bits (62), Expect = 5.1
 Identities = 14/158 (8%), Positives = 27/158 (17%), Gaps = 33/158 (20%)

Query: 253 PWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGED---------------IKAVAYDIPIP 297
             ++   D+   V  Y  +          +  E                   +       
Sbjct: 7   KLKLN-KDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKR 65

Query: 298 GYKTKTTINLRLWSTMVPSEDFDLSAFNA-GDHTKAAEALTNAEKI--------CYILYP 348
                        S  +  E  +        D             +           +YP
Sbjct: 66  SQIYG--------SRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYP 117

Query: 349 GDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANV 386
            +  V G           C       + R+  R     
Sbjct: 118 EESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPP 155


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0547    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,643,878
Number of extensions: 177403
Number of successful extensions: 457
Number of sequences better than 10.0: 1
Number of HSP's gapped: 433
Number of HSP's successfully gapped: 19
Length of query: 965
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 871
Effective length of database: 1,116,976
Effective search space: 972886096
Effective search space used: 972886096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.1 bits)