Query 002112
Match_columns 965
No_of_seqs 172 out of 833
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 12:51:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jqo_A Phosphoenolpyruvate car 100.0 3E-257 9E-262 2307.0 95.6 958 6-965 10-970 (970)
2 1jqn_A Pepcase, PEPC, phosphoe 100.0 2E-246 6E-251 2204.1 91.0 877 27-965 4-883 (883)
3 3odm_A Pepcase, PEPC, phosphoe 100.0 1.3E-64 4.6E-69 577.2 18.4 320 519-872 136-501 (560)
4 1e0t_A Pyruvate kinase, PK; ph 93.3 0.17 5.8E-06 58.6 8.8 113 512-646 178-291 (470)
5 1sgj_A Citrate lyase, beta sub 92.3 0.09 3.1E-06 56.9 4.4 102 522-638 93-196 (284)
6 1a3w_A Pyruvate kinase; allost 91.9 0.12 4.1E-06 60.3 5.1 89 524-631 208-296 (500)
7 3gr4_A Pyruvate kinase isozyme 91.3 0.33 1.1E-05 57.2 7.8 97 513-631 249-345 (550)
8 1dxe_A 2-dehydro-3-deoxy-galac 91.2 0.13 4.4E-06 54.9 4.0 107 512-632 84-216 (256)
9 3qll_A Citrate lyase; beta bar 90.6 0.19 6.4E-06 55.5 4.8 105 515-634 123-227 (316)
10 3qtg_A Pyruvate kinase, PK; TI 90.6 0.35 1.2E-05 55.7 7.1 106 523-647 197-302 (461)
11 3qqw_A Putative citrate lyase; 90.0 0.33 1.1E-05 53.9 6.0 101 522-635 111-226 (332)
12 3r4i_A Citrate lyase; TIM beta 89.5 0.6 2.1E-05 51.9 7.7 105 522-639 110-229 (339)
13 3khd_A Pyruvate kinase; malari 89.4 0.41 1.4E-05 56.0 6.4 87 526-631 234-320 (520)
14 3hqn_D Pyruvate kinase, PK; TI 89.2 0.39 1.3E-05 55.9 6.1 112 513-646 199-310 (499)
15 3qz6_A HPCH/HPAI aldolase; str 88.5 0.24 8.1E-06 53.2 3.4 98 524-632 90-214 (261)
16 3gg8_A Pyruvate kinase; malari 88.3 0.48 1.6E-05 55.3 6.0 90 523-631 222-311 (511)
17 2v5j_A 2,4-dihydroxyhept-2-ENE 87.4 0.7 2.4E-05 50.2 6.4 97 525-632 114-237 (287)
18 3t05_A Pyruvate kinase, PK; te 85.8 0.88 3E-05 54.3 6.4 87 526-631 210-296 (606)
19 1izc_A Macrophomate synthase i 85.7 0.27 9.1E-06 54.8 1.9 93 525-629 120-250 (339)
20 2e28_A Pyruvate kinase, PK; al 85.2 0.92 3.1E-05 54.0 6.2 91 523-631 187-277 (587)
21 2vws_A YFAU, 2-keto-3-deoxy su 79.6 0.9 3.1E-05 48.7 3.0 97 525-632 93-216 (267)
22 1u5h_A CITE; TIM barrel, struc 78.6 0.89 3E-05 48.9 2.6 86 523-629 85-177 (273)
23 3oyz_A Malate synthase; TIM ba 72.1 2.7 9.1E-05 48.1 4.4 121 503-629 92-227 (433)
24 4drs_A Pyruvate kinase; glycol 51.8 25 0.00085 41.3 7.6 107 523-646 230-341 (526)
25 1fa2_A Beta-amylase; TIM barre 39.4 15 0.00052 42.3 3.2 50 586-641 46-102 (498)
26 1wdp_A Beta-amylase; (beta/alp 38.7 16 0.00055 42.2 3.2 50 586-641 45-101 (495)
27 2xfr_A Beta-amylase; hydrolase 36.3 18 0.00063 42.0 3.2 50 586-641 43-99 (535)
28 2xz9_A Phosphoenolpyruvate-pro 29.9 12 0.0004 41.3 0.2 148 523-694 136-305 (324)
29 3cuz_A MSA, malate synthase A; 29.7 43 0.0015 39.3 4.9 95 524-629 208-325 (532)
30 2ols_A Phosphoenolpyruvate syn 27.2 70 0.0024 39.4 6.4 94 525-631 643-751 (794)
31 2nql_A AGR_PAT_674P, isomerase 22.2 2E+02 0.0069 31.7 8.5 38 586-636 281-318 (388)
32 3cux_A Malate synthase; TIM ba 22.0 1.4E+02 0.0048 35.0 7.2 95 523-628 205-321 (528)
33 4eys_A MCCC family protein; MC 20.1 45 0.0015 36.9 2.5 23 575-599 93-115 (346)
No 1
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=100.00 E-value=2.7e-257 Score=2307.05 Aligned_cols=958 Identities=78% Similarity=1.235 Sum_probs=843.1
Q ss_pred hhhhhhhHHHHhhhCCCCCCCchHhhHHHHHHHHHHH-HHHHhhhChhHHHHHHHHHHHHHhhhcCCChhHHHHHHHHhc
Q 002112 6 LEKMASIDAQLRLLAPAKVSEDDKLVEYDALLLDRFL-DILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLT 84 (965)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ll~~ll-evl~e~~G~~~~~~vE~iR~la~~~~~~~~~~~~~~L~~~l~ 84 (965)
.+++++++.+++.+.|++++++ ..|++|+++||.+| +||++++|+++|++||+||++|+++++.++++..++|.+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-~~Lr~dv~lLg~lLg~vl~~~~g~~~~~~ve~ir~ls~~~~r~~~~~~~~~l~~~l~ 88 (970)
T 1jqo_A 10 GEKHHSIDAQLRQLVPGKVSED-DKLIEYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLT 88 (970)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred HHHHHhhhHHhhcccCCCCCcc-HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHh
Confidence 4789999999999999999996 58999999999998 999999999999999999999998744335567789999999
Q ss_pred CCCcchHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHhhc-CCCcccCcCCCcchHHHHHHHHHHHcCCCHHHHHHHhhcC
Q 002112 85 SLDPGDSIVVTKSFSHMLNLANLAEEVQIAYRRRIKLKK-GDFVDENSATTESDIEETLKRLVVQLKKSPEEVFDALKNQ 163 (965)
Q Consensus 85 ~L~~~~~~~vaRAFs~yf~L~NiAEe~hr~r~~r~~~~~-~~~~~~~~~~~~~sl~~~l~~L~~~~g~~~e~i~~~L~~~ 163 (965)
+|+++++..|+||||+||||+|||||+|++|++|..... ++.++.+..+..+||..++.+|+++.|+++++|+++|+++
T Consensus 89 ~L~~~~~~~v~RAFs~~~~L~NiAEe~~~~r~~r~~~~~~~~~~~~~~~~~~~sl~~~~~~L~~~~g~~~~~i~~~L~~~ 168 (970)
T 1jqo_A 89 GLAPADAILVASSILHMLNLANLAEEVQIAHRRRNSKLKKGGFADEGSATTESDIEETLKRLVSEVGKSPEEVFEALKNQ 168 (970)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------CHHHHHHHHHTTSCCCHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 999999999999999999999999999999887754322 3332222334679999999999548899999999999999
Q ss_pred ceeEeeccCCCccchhhHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccCCCCCChHHHHHHHHHHH
Q 002112 164 TVDLVFTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYF 243 (965)
Q Consensus 164 ~i~pVlTAHPTEa~RrtvL~~~r~I~~~L~~~~~~~~~~~e~~~~~~~L~~~i~~LW~T~eiR~~kPtv~DE~~~~l~y~ 243 (965)
.|+|||||||||++|||||+||++|+++|.++++.++++.|+++++++|+++|+.||||||||..||||.||++||++||
T Consensus 169 ~v~pVlTAHPTE~~RrTvl~k~~~I~~lL~~l~~~~lt~~e~~~~~~~L~~~I~~lW~TdeiR~~kPtv~DE~~~gl~y~ 248 (970)
T 1jqo_A 169 TVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITDDDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYI 248 (970)
T ss_dssp EEEEEEECCTTCCSCHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHSCCSCCSCCCHHHHHHHHHHHH
T ss_pred ceeeeeccCCccccHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhCChhhhccCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002112 244 HETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMF 323 (965)
Q Consensus 244 ~~~l~~avP~~~~~l~~~l~~~~~~~~~p~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~l~~~r~~al~~y~~~l~~L~~ 323 (965)
++|||++||.+|++++++|.+.+....+|...++|+|||||||||||||||||+||++|+.++|++|+++|+++|++|++
T Consensus 249 ~~sl~~avP~~~r~l~~al~~~~~~~~l~~~~~~i~fGSWiGGDRDGNP~VTaevT~~~~~~~r~~al~~Y~~~l~~L~~ 328 (970)
T 1jqo_A 249 HETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMF 328 (970)
T ss_dssp TTTTTTTHHHHHHHHHHHHHTTTCCSCCCTTCCSEEEEECTTTBCTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998874324456555669999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCHHHHHHHhhhhhcchhhh-hhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCC
Q 002112 324 ELSMWRCNDELRARADGLHRSSKRDA-KHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTH 402 (965)
Q Consensus 324 ~LS~~~~s~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~ 402 (965)
+||+++||++|++.++...+..++.. ++|..++..++++||||++|..|++||.+|+.++...+.+.....+....|.+
T Consensus 329 eLS~s~~s~eL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EPYR~~L~~i~~rL~~T~~~~~~~l~~~~~~~~~~~~Y~~ 408 (970)
T 1jqo_A 329 ELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQIPPNEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTS 408 (970)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHCCCCCTTCSSSCSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCSTTSCCS
T ss_pred HcCCCCCCHHHHHHHHHHHhhcccchhcccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccCCCC
Confidence 99999999999987765433333221 23333444556789999999999999999998766544332211112347999
Q ss_pred hHHhhhHHHHHHHHHHhcCCccccchHHHHHHHHHHhcCCccccccccccchHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q 002112 403 VEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQE 482 (965)
Q Consensus 403 ~~ell~dL~~i~~SL~~~~~~~~a~~~L~~lir~v~~FGfhla~LDiRQ~S~~H~~a~~el~~~~g~~~Y~~l~E~~r~~ 482 (965)
++||++||..|++||++||+..+|+|.|.++||+|++|||||++|||||||++|++|++||++++|+++|.+|||++|++
T Consensus 409 ~~ell~dL~~i~~SL~~~g~~~iA~g~L~~lir~V~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~ 488 (970)
T 1jqo_A 409 IEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFGLSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQE 488 (970)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCTTTTTHHHHHHHHHHHHTTSSSEEEEECCHHHHHHHHHHHHHHHTSCCSTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCChhhhhhhHHHHHHHHHHhCeeccccchhhcchHHHHHHHHHHHHcCCCCcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCCh
Q 002112 483 WLLSELRGKRPLFGSDLPKTEEIADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKL 562 (965)
Q Consensus 483 ~L~~eL~~~rpl~~~~~~~s~~~~e~l~~f~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi 562 (965)
||.+||.++||++++..++|++++++|++|++++++|+++|++||||||+++||||+|++|+|++|+.++|+|||||||+
T Consensus 489 ~L~~eL~~~rpL~~~~~~~s~~~~evL~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi 568 (970)
T 1jqo_A 489 WLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERL 568 (970)
T ss_dssp HHHHHHHCCSCCCCTTCCCCHHHHHHHHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSH
T ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCC
Q 002112 563 ADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRG 642 (965)
Q Consensus 563 ~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRG 642 (965)
+||+||+.||++||++|+||+|++++|||||||||||||||+++|+|+||+||++|+++|++|||+++||||||||||||
T Consensus 569 ~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRG 648 (970)
T 1jqo_A 569 ADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRG 648 (970)
T ss_dssp HHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGT
T ss_pred HHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCcccCceeeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 002112 643 GGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEY 722 (965)
Q Consensus 643 GGPt~~ailaqP~gs~~g~ir~TeQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~~Y 722 (965)
|||+|+||+||||||++|.+|+|||||||++|||+|++|.||||++++|++++++.+++.++++|+++|++||+.|+++|
T Consensus 649 Ggp~~~ailaqP~gsv~G~ir~TeQGEvI~~kYg~p~~a~~nLe~~~aA~l~a~l~~~~~~~~~~~~~m~~la~~s~~~Y 728 (970)
T 1jqo_A 649 GGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLCFQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEY 728 (970)
T ss_dssp CCCHHHHHHTSCTTSCTTEEEEEEEHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHcCCCcccCCceEEEeecHHHHHhcCChHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987666677899999999999999999
Q ss_pred HHhhhcCCchHHHHHhhCchhHhhhCCCCCCCCccCCCCCCCCccccchhhhhhhhhccccchhhHHHHHHHHHHhCCCc
Q 002112 723 RSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKN 802 (965)
Q Consensus 723 r~lv~~~p~F~~yF~~aTPi~ei~~lnIGSRPakR~~~~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAL~~~~~~~~~~ 802 (965)
|++||++|+|++||+++||+.||+.|||||||+||+++++++|||||||||||+|+|++||||||+|+||+.++++++++
T Consensus 729 r~lv~~~p~Fv~yF~~aTP~~ei~~LnIGSRPa~R~~~~~i~~LRAIPWvfsWtQ~R~~lP~w~G~GsAl~~~~~~~~~~ 808 (970)
T 1jqo_A 729 RSVVVKEARFVEYFRSATPETEYGRMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRN 808 (970)
T ss_dssp HHHHTTCTTHHHHHHHHSCCGGGGGGCCSCCC--------CTTCCSHHHHHHHHHTTCCHHHHTTHHHHHHHHHHHCTTH
T ss_pred HHHHhcCCCHHHHHHHhChHHHHHhCccCCCCccCCCCCCcccccccchhhHHHhccCCcchhhhHHHHHHHHHHcCchh
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999988767
Q ss_pred HHHHHHHHhhChhHHHHHHHHHHHHHhcCHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHhCCCCccCCCchHH
Q 002112 803 LHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLK 882 (965)
Q Consensus 803 ~~~L~~my~~wpfF~~~ldn~em~LaKaD~~Ia~~Y~~l~~d~~~~~i~~~i~~E~~~T~~~vl~itg~~~Ll~~~p~l~ 882 (965)
++.|++||++||||+++|||++|+|+|+|+.||++|+++++|++++.||++|++||++|+++|++|||+++||+++|+|+
T Consensus 809 l~~L~~my~~wPfF~t~ldn~eM~laK~Dl~iA~~Y~~ll~d~~~~~i~~~i~~E~~~T~~~ll~itg~~~LL~~~p~l~ 888 (970)
T 1jqo_A 809 FQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLK 888 (970)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCSTTHHHHHHHHHHHHHHHHHHHHHHTCSSTTSSCHHHH
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccChHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHhcCCCCCCccCCcchhhhhhccchhhhhhhcCCCCCCCcchhHHHHHHHHHHHhhhc
Q 002112 883 QRLRLRDAYITTLNVCQAYTLKQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQ 962 (965)
Q Consensus 883 ~si~~R~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~TingIAaGlr 962 (965)
+||++|||||||||++||+||||+|+.+...++.|+.+++++++. +..||+.+||+..+++.++++|++||||||||||
T Consensus 889 ~si~lR~pyvdpLn~lQvelL~r~R~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~lllTInGIAAGlr 967 (970)
T 1jqo_A 889 QGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFADEN-KPAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQ 967 (970)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCCCCCSCC--------CTTTTTSSSCSSCTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhHHhhHHHHHHHHHHHHHHhcCCCCCccccccccccccc-chhhhhccCcccccchHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999973311111222333444443 4459999999999999999999999999999999
Q ss_pred cCC
Q 002112 963 NTG 965 (965)
Q Consensus 963 nTG 965 (965)
|||
T Consensus 968 NTG 970 (970)
T 1jqo_A 968 NTG 970 (970)
T ss_dssp CCC
T ss_pred cCC
Confidence 999
No 2
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=100.00 E-value=1.7e-246 Score=2204.08 Aligned_cols=877 Identities=42% Similarity=0.715 Sum_probs=820.1
Q ss_pred chHhhHHHHHHHHHHH-HHHHhhhChhHHHHHHHHHHHHHhhhcCCChhHHHHHHHHhcCCCcchHHHHHHHHHHHhhhh
Q 002112 27 DDKLVEYDALLLDRFL-DILQDLHGEDIRETVQECYELSAEYEGKRDSQKLEELGNVLTSLDPGDSIVVTKSFSHMLNLA 105 (965)
Q Consensus 27 ~~~~l~~~~~ll~~ll-evl~e~~G~~~~~~vE~iR~la~~~~~~~~~~~~~~L~~~l~~L~~~~~~~vaRAFs~yf~L~ 105 (965)
.+.+|++|+++||.+| +||++++|+++|++||+||.+|++.+.+ +++..++|.+.+.+|+++++..|+||||+||||+
T Consensus 4 ~~~~l~~dv~lLg~lLg~vl~~~~g~~~~~~ve~ir~l~~~~r~~-~~~~~~~l~~~l~~l~~~~~~~v~rAFs~~~~L~ 82 (883)
T 1jqn_A 4 QYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKSSRAG-NDANRQELLTTLQNLSNDELLPVARAFSQFLNLA 82 (883)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcc-CchhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 4568999999999998 9999999999999999999999998754 4567789999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHhhcCCCcccCcCCCcchHHHHHHHHHHHc-CCCHHHHHHHhhcCceeEeeccCCCccchhhHHHH
Q 002112 106 NLAEEVQIAYRRRIKLKKGDFVDENSATTESDIEETLKRLVVQL-KKSPEEVFDALKNQTVDLVFTAHPTQSVRRSLLQK 184 (965)
Q Consensus 106 NiAEe~hr~r~~r~~~~~~~~~~~~~~~~~~sl~~~l~~L~~~~-g~~~e~i~~~L~~~~i~pVlTAHPTEa~RrtvL~~ 184 (965)
|||||+|++|++|.. + +.++||..++.+| ++. |++++++++.|+++.|+|||||||||++|||||+|
T Consensus 83 NiAE~~~~~r~~~~~---~--------~~~~sl~~~~~~l-~~~~g~~~~~i~~~L~~~~i~pVlTAHPTE~~Rrtvl~~ 150 (883)
T 1jqn_A 83 NTAEQYHSISPKGEA---A--------SNPEVIARTLRKL-KNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHK 150 (883)
T ss_dssp HHHHHHHHHCTTTTC---T--------TCTHHHHHHHHHH-HTCTTCCHHHHHHHHHTCCEEEEECCCTTCCBSSCCHHH
T ss_pred HHHHHHHHHHHHhhc---C--------CCCccHHHHHHHH-HHhcCCCHHHHHHHHhcCeeeeeeccCCccchHHHHHHH
Confidence 999999999765522 1 2569999999999 788 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHhhcccccCCCCCChHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Q 002112 185 HGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKN 264 (965)
Q Consensus 185 ~r~I~~~L~~~~~~~~~~~e~~~~~~~L~~~i~~LW~T~eiR~~kPtv~DE~~~~l~y~~~~l~~avP~~~~~l~~~l~~ 264 (965)
|++|+++|.++++..+++.|+++++++|+++|+.||||++||..||||.||++||++||++|||++||.+|+++++++.+
T Consensus 151 ~~~I~~lL~~~~~~~l~~~e~~~~~~~L~~~I~~lW~T~eiR~~kPtv~DE~~~gl~y~~~sl~~avP~~~~~l~~~l~~ 230 (883)
T 1jqn_A 151 MVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEE 230 (883)
T ss_dssp HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHCCCBCSSCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhCcchhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCCCCCCCcccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCCCCHHHHHHHhhhhhc
Q 002112 265 IGINERVPYNAPLIQFSSWMGGDRDGNPRVTSEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRARADGLHRS 344 (965)
Q Consensus 265 ~~~~~~~p~~~~~i~fgSWiGGDRDGNP~VT~~vT~~~l~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~~~~~~~ 344 (965)
.+. ..+|..++||+|||||||||||||||||+||++|+.++|++++++|+++|++|.++||+++||++|.+.++.
T Consensus 231 ~~~-~~~~~~~~~i~fgSWiGGDRDGNP~VTa~vT~~~~~~~r~~al~~y~~~l~~L~~~LS~~~~s~~l~~~~~~---- 305 (883)
T 1jqn_A 231 NLG-YKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGE---- 305 (883)
T ss_dssp HTS-CCCCTTCCCEEEEECTTTBCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCT----
T ss_pred hcC-CCCCCCCCccccCCcCccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhh----
Confidence 754 345555678999999999999999999999999999999999999999999999999999999999885543
Q ss_pred chhhhhhhhhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcCCCCCChHHhhhHHHHHHHHHHhcCCcc
Q 002112 345 SKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGISDIPEDIAYTHVEQFLEPLELCYRSLCACGDRP 424 (965)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~~~~~~~~~y~~~~ell~dL~~i~~SL~~~~~~~ 424 (965)
.+++||||++|..|++||.+|..++.....+.. ..+.+..|.+++||++||..|++||++||+..
T Consensus 306 --------------~~~~EPyR~~l~~i~~rL~~t~~~~~~~~~~~~-~~~~~~~y~~~~ell~dL~~i~~SL~~~g~~~ 370 (883)
T 1jqn_A 306 --------------EGAAEPYRYLMKNLRSRLMATQAWLEARLKGEE-LPKPEGLLTQNEELWEPLYACYQSLQACGMGI 370 (883)
T ss_dssp --------------TSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCSSCCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred --------------hcCCCcHHHHHHHHHHHHHHHHHHHHhhhccCC-CCCcccCCCCHHHHHHHHHHHHHHHHHCCChh
Confidence 146899999999999999999987655443220 11123459999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhcCCccccccccccchHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCHH
Q 002112 425 IADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVIDAITKHLGIGSYREWSEEKRQEWLLSELRGKRPLFGSDLPKTEE 504 (965)
Q Consensus 425 ~a~~~L~~lir~v~~FGfhla~LDiRQ~S~~H~~a~~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~ 504 (965)
+|+|.|.++|++|++|||||++|||||||++|++|++||++++|+++|.+|||++|++||.+||+++||+.+++.++|++
T Consensus 371 ia~~~L~~lir~v~~FGfhLa~LDiRQ~S~~H~~al~el~~~~g~~~Y~~l~E~~r~~~L~~eL~~~rpl~~~~~~~s~~ 450 (883)
T 1jqn_A 371 IANGDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAE 450 (883)
T ss_dssp HHTTHHHHHHHHHHHTTTTSSEEEEEEEHHHHHHHHHHHHHHHTSCCGGGSCHHHHHHHHHHHHHCSSCCSCSSCCCCHH
T ss_pred hHHhHHHHHHHHHHhhCcccCCccccccchHHHHHHHHHHHHcCCCCcccCCHHHHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhh
Q 002112 505 IADVLDTFHVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNR 584 (965)
Q Consensus 505 ~~e~l~~f~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~ 584 (965)
++++|++|++++++++++|++||||||+++||||+|++|+|++|+..+|+|||||||++||+||+.||++||++|+||+|
T Consensus 451 ~~~~L~~f~~i~~~~~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~ 530 (883)
T 1jqn_A 451 TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGL 530 (883)
T ss_dssp HHHHHHHHHHHHHSCTTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHh
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred cCCeeEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhhhhhcCCCCcccCceee
Q 002112 585 ISGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRV 664 (965)
Q Consensus 585 l~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~ailaqP~gs~~g~ir~ 664 (965)
++++|||||||||||||||+++|+|+||+||++|+++|++|||+++|||||||||||||||+|+||+||||||++|++|+
T Consensus 531 l~~~qeVMlGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv~g~~r~ 610 (883)
T 1jqn_A 531 IQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRV 610 (883)
T ss_dssp TTTEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTTTTCEEE
T ss_pred hCCeEEEEEeeccccccccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCcCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCchHHHHHhhCchhH
Q 002112 665 TVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEME 744 (965)
Q Consensus 665 TeQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~~~~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~aTPi~e 744 (965)
|||||||++|||+|++|.+|||++++|++++++.+++.|+++|+++|++||+.|+++||++|+++|+|++||+++||+.|
T Consensus 611 TeQGEvI~~kY~~p~~a~~nLe~~~~A~l~~~~~~~~~~~~~~~~~m~~la~~s~~~Yr~lv~~~p~fv~yf~~~tP~~e 690 (883)
T 1jqn_A 611 TEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQE 690 (883)
T ss_dssp EECGGGHHHHHSSHHHHHHHHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSCHHH
T ss_pred EecchHHHHhcCChHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhChHHH
Confidence 99999999999999999999999999999999886667789999999999999999999999999999999999999999
Q ss_pred hhhCCCCCCCCccCCCCCCCCccccchhhhhhhhhccccchhhHHHHHHHHHHhCCCcHHHHHHHHhhChhHHHHHHHHH
Q 002112 745 YGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDIKNLHMLQEMYNLWPFFRVTIDLVE 824 (965)
Q Consensus 745 i~~lnIGSRPakR~~~~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAL~~~~~~~~~~~~~L~~my~~wpfF~~~ldn~e 824 (965)
|+.|||||||+||+++++++|||||||||||+|+|+++|+|||+|+||+.+++++ .++.|++||++||||+++|||++
T Consensus 691 i~~L~IGSRPa~R~~~~~i~~LRAIPwvfsW~Q~R~~lP~w~G~GsAl~~~~~~~--~~~~L~~my~~wpfFrt~l~n~e 768 (883)
T 1jqn_A 691 LGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDG--KQSELEAMCRDWPFFSTRLGMLE 768 (883)
T ss_dssp HHHSSCSSCC------CCGGGSCHHHHHHHHHHTTCCGGGTTTHHHHHHHHHTTT--CHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHhccccCCccccCCCCCccccccchhhhHHHHhccCchhhhhHHHHHHHHHhcC--hHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999988899999999999999999999999999999999999876 59999999999999999999999
Q ss_pred HHHHhcCHHHHHHH-hhccCCccchHHHHHHHHHHHHHHHHHHHHhCCCCccCCCchHHHHHHhhhhhhhhhHHHHHHHH
Q 002112 825 MVFAKGDPGIAALY-DKLLVSEELQPFGEKLRANYAETKSLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQAYTL 903 (965)
Q Consensus 825 m~LaKaD~~Ia~~Y-~~l~~d~~~~~i~~~i~~E~~~T~~~vl~itg~~~Ll~~~p~l~~si~~R~pyvdpLn~lQvelL 903 (965)
|+|+|+|+.||++| +.||+| ++++||+.|++||++|+++|++|||+++||+++|++++||++|||||||||++||+||
T Consensus 769 m~laK~Dl~iA~~Y~~~Lv~~-~~~~i~~~i~~E~~~T~~~ll~itg~~~Ll~~~p~l~~si~~R~pyv~pLn~lQvelL 847 (883)
T 1jqn_A 769 MVFAKADLWLAEYYDQRLVDK-ALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELL 847 (883)
T ss_dssp HHHHHCCHHHHHHHHHHHSCT-TTHHHHHHHHHHHHHHHHHHHHHTTCSSTTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHhCCccccccChHHHHHHHhhhHHhhHHHHHHHHHH
Confidence 99999999999999 888766 7889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCccCCcchhhhhhccchhhhhhhcCCCCCCCcchhHHHHHHHHHHHhhhccCC
Q 002112 904 KQIRDPNFHVKVRPHLSKEYMESRKPAAELVRLNPTSEYAPGLEDTVILTMKGIAAGMQNTG 965 (965)
Q Consensus 904 ~r~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~TingIAaGlrnTG 965 (965)
||+|+.+.. ..++++.+.++|++|||||||||||||
T Consensus 848 ~r~R~~~~~--------------------------~~~~~~~l~~~l~lTinGIAaGlRNTG 883 (883)
T 1jqn_A 848 HRSRQAEKE--------------------------GQEPDPRVEQALMVTIAGIAAGMRNTG 883 (883)
T ss_dssp HHHHHHHHH--------------------------TCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHhcCCC--------------------------cccccHHHHHHHHHHHHHHHHHhccCC
Confidence 999952100 000146799999999999999999999
No 3
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=100.00 E-value=1.3e-64 Score=577.16 Aligned_cols=320 Identities=19% Similarity=0.213 Sum_probs=268.1
Q ss_pred CCcchhhHHhccCCChhhHHHHHHHHHH-c-------CC---CCCCccccccCChHHHhchHHHHHHHhccHHHHhhc--
Q 002112 519 PADSFGAYIISMATAPSDVLAVELLQRE-C-------RV---KQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRI-- 585 (965)
Q Consensus 519 ~~~~~~~yIISmt~sasDvL~vl~L~ke-~-------Gl---~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l-- 585 (965)
+.++|+.||||||+|+||||+|++|+|+ + |. .++|+|||||||++||.||+.||+++|++ ||. +
T Consensus 136 g~~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~--~r~-l~~ 212 (560)
T 3odm_A 136 GTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEI--EKS-KGH 212 (560)
T ss_dssp SSCSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHH--HHH-TTC
T ss_pred CCcccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHH--HHH-hcc
Confidence 6789999999999999999999999965 3 43 36899999999999999999999999996 887 7
Q ss_pred -CCeeEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhh--hhhcCCCCcccCce
Q 002112 586 -SGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHL--AILSQPPDTIHGSL 662 (965)
Q Consensus 586 -~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~--ailaqP~gs~~g~i 662 (965)
++.|||||||||||||||++||+|+||+||.+|+++|+++||+++|||||||||||||||++. +|++||||+ +
T Consensus 213 ~~~~QeVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lFHGRGGtvgRGGgp~~~a~aiLaQppG~----~ 288 (560)
T 3odm_A 213 ILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSEENIDEILATYSGI----K 288 (560)
T ss_dssp CCSEEEEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECCSSGGGTCCCTTCHHHHHHHTTTC----C
T ss_pred cCCeEEEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeeCCCCCcCCCCCHHHHHHHHhCCCCC----c
Confidence 578999999999999999999999999999999999999999999999999999999999985 599999999 7
Q ss_pred eeecccchhhhhcCChhHHHHHHHHHHHHHHHccCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHhhhcCCchHHHHHh
Q 002112 663 RVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVS-PK---PEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRL 738 (965)
Q Consensus 663 r~TeQGEvI~~kyg~~~~A~r~Le~~~aa~l~~sl~~~~~-~~---~~~~~~m~~ls~~s~~~Yr~lv~~~p~F~~yF~~ 738 (965)
++|||| +.||+.|. +.+.+|+.+....++++ |. .+|+++|+.+++.|+++||++|++.++|++||+.
T Consensus 289 tvTeQg---a~KYd~p~------~~y~~AI~~a~~~~p~~~P~~~~~e~~e~m~~la~~s~~~YR~~V~~~ad~I~~~a~ 359 (560)
T 3odm_A 289 TFTFQS---ALRYDHGE------EATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSD 359 (560)
T ss_dssp EEEECH---HHHHTTCH------HHHHHHHHHHHHHGGGCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEeeec---hhhcCCCH------HHHHHHHHHHHhCCCCcCccccchHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 799999 99999999 88999999888765444 53 5899999999999999999999999999999999
Q ss_pred hCchhHhhhCCCC-----CCCCccC--------------------CCCCCCCccccchhhhhhhhhccccchhhHHHHHH
Q 002112 739 ATPEMEYGRMNIG-----SRPSKRK--------------------PSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFK 793 (965)
Q Consensus 739 aTPi~ei~~lnIG-----SRPakR~--------------------~~~~l~dLRAIPWVFaWtQ~R~~lP~WyGvGsAL~ 793 (965)
+||..+.+.|+|| ||=.--. ...++.=-|||.++.|| -+=-+-|...|+|++|+
T Consensus 360 ~tP~rR~RkLhiG~lfGYsR~~~~~~~~~~~~~d~v~~~e~~~~~~~~~~~lPRAI~Ft~al-YSiGlPPelig~~~~l~ 438 (560)
T 3odm_A 360 FIPKNRDRLTKAKTGLEYNREVANLDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAM-YTLGMPPELMGMGRALN 438 (560)
T ss_dssp TSCCCSCBCC------------CCHHHHHTTCCCHHHHHHHHCSCCCSCCCCCCHHHHHHHH-HHTTCCGGGTTHHHHHH
T ss_pred hCChhhhccccccccccccccCCCccccccccccchhhhhhhcccccccccCCchhhhhHHH-HhcCCChHHhcchhhHH
Confidence 9999999999999 7644210 01225567999999999 66778899999999998
Q ss_pred HHHHhC-CCcHHHHHHHHhhChhHHHHHHHHHHHHHhcCHHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHhCCC
Q 002112 794 HVIQKD-IKNLHMLQEMYNLWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELQPFGEKLRANYAETKSLLLQVAGHR 872 (965)
Q Consensus 794 ~~~~~~-~~~~~~L~~my~~wpfF~~~ldn~em~LaKaD~~Ia~~Y~~l~~d~~~~~i~~~i~~E~~~T~~~vl~itg~~ 872 (965)
++.++= .+.++.|.+.|.. .|.|+..+..|.+.-.-.. -+.+.+.++++..++.+.++.|-+
T Consensus 439 ~~k~~l~~~~ld~l~~~yp~---------------l~~Dl~~a~~y~~~~~~~~--~l~~~~~~~v~eDi~~~~~~~~i~ 501 (560)
T 3odm_A 439 EIKTKYGQEGIDKLLEIYPI---------------LRKDLAFAARFANGGVSKK--IIDEEARQEYKEDMKYVNEILNLG 501 (560)
T ss_dssp HHHHHHCHHHHHHHHHHSTT---------------HHHHHHHHHTTCCTTTTTT--TSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhhcCHHHHHHHHHHhhh---------------HHHHHHHHHHhcCHHHHHH--hcCHHHHHHHHHHHHHHHHHhCCC
Confidence 877331 1247777777766 6788888888876422222 334566777777888888888753
No 4
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=93.33 E-value=0.17 Score=58.61 Aligned_cols=113 Identities=13% Similarity=0.086 Sum_probs=84.3
Q ss_pred HHHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHc-CCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeE
Q 002112 512 FHVISELPADSFGAYIISMATAPSDVLAVELLQREC-RVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQE 590 (965)
Q Consensus 512 f~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~-Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~Qe 590 (965)
++...+.+.+. .++|+.++++|+.++--+.++. |- .+.|++..||.+.++|.++|++. . + -
T Consensus 178 i~~~l~~gvD~---I~lsfV~saeDv~~~~~~l~~~~~~--~i~IiakIEt~eav~nldeI~~~--s---------D--g 239 (470)
T 1e0t_A 178 LIFGCEQGVDF---VAASFIRKRSDVIEIREHLKAHGGE--NIHIISKIENQEGLNNFDEILEA--S---------D--G 239 (470)
T ss_dssp HHHHHHHTCSE---EEESSCCSHHHHHHHHHHHHTTTCT--TCEEEEEECSHHHHHTHHHHHHH--S---------S--E
T ss_pred HHHHHHcCCCE---EEECCCCCHHHHHHHHHHHHHhcCC--CceEEEEECCHHHHHhHHHHHHH--C---------C--E
Confidence 34444455444 5899999999999998888877 64 68899999999999999999976 1 1 6
Q ss_pred EEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCch
Q 002112 591 VMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPT 646 (965)
Q Consensus 591 VMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt 646 (965)
||+|-.|=+.+-|. ..+..+|+++...|+++|+.+..===-=.|+-.-.-||
T Consensus 240 ImVargDLgveig~----e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PT 291 (470)
T 1e0t_A 240 IMVARGDLGVEIPV----EEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPT 291 (470)
T ss_dssp EEEEHHHHHHHSCH----HHHHHHHHHHHHHHHHHTCEEEEECC---------CCC
T ss_pred EEECchHhhhhcCH----HHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCcc
Confidence 99999999999885 56999999999999999998765222223333444454
No 5
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=92.30 E-value=0.09 Score=56.93 Aligned_cols=102 Identities=14% Similarity=0.139 Sum_probs=79.7
Q ss_pred chhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcc
Q 002112 522 SFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKD 601 (965)
Q Consensus 522 ~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KD 601 (965)
.+..++++|++++.|+-.+.-+.++.| ..+.|.|+.||...+.|+.+|.. ..+..-+|+|-.|=+.+
T Consensus 93 g~~~i~lPkv~s~~~v~~~~~~l~~~g--~~~~i~~~IEt~~av~~~~eIa~-----------~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 93 ELSGVVVPKLEMGAEARQVAQMLQERS--LPLPILAGLETGAGVWNAREIME-----------VPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TSSEEEECSCCSHHHHHHHHHHHHHTT--CCCCEEEEECSHHHHHTHHHHHT-----------STTEEEEEECHHHHHHH
T ss_pred cCCEEEeCCCCCHHHHHHHHHHHHhcC--CCeEEEEEecCHHHHHHHHHHHc-----------CCCCcEEEECHHHHHHH
Confidence 455789999999999999988888876 37889999999999999988872 23567799998887777
Q ss_pred hhhH--hHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCC
Q 002112 602 AGRL--SAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGT 638 (965)
Q Consensus 602 gG~l--aa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGs 638 (965)
-|.- ...-.+..++.+++..|+++|+.+ ++|=-|.
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~--i~~v~~~ 196 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAA--LDIVVTA 196 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEE--EECCCCC
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCe--eeCCcCC
Confidence 6641 112357789999999999999986 4443333
No 6
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=91.93 E-value=0.12 Score=60.30 Aligned_cols=89 Identities=15% Similarity=0.196 Sum_probs=77.4
Q ss_pred hhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcchh
Q 002112 524 GAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAG 603 (965)
Q Consensus 524 ~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG 603 (965)
...++||.+++.|+.++--+..++| ..+.|++..||.+.++|.++|++. . --||+|-.|=+.+-|
T Consensus 208 d~I~lpfV~saeDv~~~~~~l~~~~--~~i~IiakIEt~eav~nldeI~~~--~-----------DgImvgrgDLgvelg 272 (500)
T 1a3w_A 208 HMVFASFIRTANDVLTIREVLGEQG--KDVKIIVKIENQQGVNNFDEILKV--T-----------DGVMVARGDLGIEIP 272 (500)
T ss_dssp SEEEECSCCSHHHHHHHHHHHHHHH--TTSEEEEEECSSHHHHSHHHHHHH--S-----------SEEEECHHHHHHHTT
T ss_pred CEEEECCCCCHHHHHHHHHHHHhcC--CCcEEEEEECChHHHHhHHHHHHh--C-----------CEEEECchHhhhhcC
Confidence 3458999999999999988777776 368899999999999999999976 1 179999999999998
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 604 RLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 604 ~laa~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
. ..+..+|+++...|+++|+.+..
T Consensus 273 ~----~~v~~aqk~ii~aaraaGkpvi~ 296 (500)
T 1a3w_A 273 A----PEVLAVQKKLIAKSNLAGKPVIC 296 (500)
T ss_dssp G----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred c----HHHHHHHHHHHHHHHhcCCCEEE
Confidence 3 56889999999999999999874
No 7
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=91.26 E-value=0.33 Score=57.15 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=80.7
Q ss_pred HHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEE
Q 002112 513 HVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVM 592 (965)
Q Consensus 513 ~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVM 592 (965)
+...+.+.+.+ .+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++.. =-||
T Consensus 249 ~f~~~~~vD~i---a~SfVr~a~Dv~~~r~~L~~~g--~~i~IIAKIE~~eav~nldeIl~~s-------------DgIm 310 (550)
T 3gr4_A 249 KFGVEQDVDMV---FASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRFDEILEAS-------------DGIM 310 (550)
T ss_dssp HHHHHTTCSEE---EETTCCSHHHHHHHHHHHTTTT--TTSEEEEEECSHHHHHTHHHHHHHS-------------SEEE
T ss_pred HHHHHcCCCEE---EecCCCCHHHHHHHHHHHHhcC--CCceEEEEeCCHHHHHHHHHHHHhC-------------CEEE
Confidence 34445555543 4799999999999998888877 3789999999999999999999971 2699
Q ss_pred EeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 593 IGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 593 lGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
+|-.|=+-+-|. ..+..+|+++...|+++|..+..
T Consensus 311 VaRGDLgvei~~----e~vp~~Qk~iI~~c~~agkpVi~ 345 (550)
T 3gr4_A 311 VARGDLGIEIPA----EKVFLAQKMMIGRCNRAGKPVIC 345 (550)
T ss_dssp EEHHHHHHHSCG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred EccchhcccCCH----HHHHHHHHHHHHHHHHhCCCEEE
Confidence 999998877776 46899999999999999988774
No 8
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=91.17 E-value=0.13 Score=54.89 Aligned_cols=107 Identities=13% Similarity=0.189 Sum_probs=80.5
Q ss_pred HHHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHc--CC----------------------CCCCccccccCChHHHhc
Q 002112 512 FHVISELPADSFGAYIISMATAPSDVLAVELLQREC--RV----------------------KQPLRVVPLFEKLADLEA 567 (965)
Q Consensus 512 f~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~--Gl----------------------~~~l~VvPLFETi~DL~~ 567 (965)
++.+.+.+.+ ..+++|++++.|+-++.-.++.. |. ...+.|+++.||...+.|
T Consensus 84 i~~~l~~g~~---gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~ 160 (256)
T 1dxe_A 84 IKRLLDIGFY---NFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN 160 (256)
T ss_dssp HHHHHHTTCC---EEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHT
T ss_pred HHHHHhcCCc---eeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHh
Confidence 3344445443 37999999999998887666521 11 136789999999999999
Q ss_pred hHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcchhhHhH--HHHHHHHHHHHHHHHHHhCCeEEEe
Q 002112 568 APASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (965)
Q Consensus 568 a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~va~~~gV~l~~F 632 (965)
+++|.. . .+.--+|+|-.|=+.+-|.... .=++..++.+++..|+++|+.+..|
T Consensus 161 ~~eIa~----~-------~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~ 216 (256)
T 1dxe_A 161 VDAIAA----T-------EGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGIL 216 (256)
T ss_dssp HHHHHT----S-------TTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhC----C-------CCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEe
Confidence 999984 1 3566799999988888775431 2258899999999999999998664
No 9
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=90.63 E-value=0.19 Score=55.48 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=80.7
Q ss_pred HHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEe
Q 002112 515 ISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIG 594 (965)
Q Consensus 515 i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlG 594 (965)
+...+. .+..+++.|++++.|+-.+.-+.+.++ ..+.|+|+.||...+.|+.+|.. ...+..-+++|
T Consensus 123 ~l~~g~-~~~gIvlPKvesa~~v~~~~~~l~~~~--~~~~l~~~IET~~gv~~~~eIa~----------a~~~v~~l~~G 189 (316)
T 3qll_A 123 LLECGS-LPDYLVLPKTESAAHLQILDRLMMFAG--SDTRLIGIIESVRGLNAVESIAA----------ATPKLAGLIFG 189 (316)
T ss_dssp HHHSCC-CCSEEEETTCCSHHHHHHHHHHTSCC----CCEEEEEECSHHHHHTHHHHHT----------SCTTEEEEEEC
T ss_pred HHhCCC-CCCEEEeCCCCCHHHHHHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHHHh----------cCCCceEEEEC
Confidence 344442 356689999999999988877665443 36789999999999999999875 12467789999
Q ss_pred eccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecC
Q 002112 595 YSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHG 634 (965)
Q Consensus 595 YSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHG 634 (965)
-.|=..|-|.-...=.+..+..+++..|+.+|+.. ++|
T Consensus 190 ~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~--id~ 227 (316)
T 3qll_A 190 AADMAADIGAASTWEPLALARARLVSACAMNGIPA--IDA 227 (316)
T ss_dssp HHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCE--EEC
T ss_pred HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCce--eec
Confidence 99988888875555556778889999999999986 544
No 10
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=90.59 E-value=0.35 Score=55.75 Aligned_cols=106 Identities=21% Similarity=0.157 Sum_probs=86.0
Q ss_pred hhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcch
Q 002112 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (965)
+.-..+|+.++++||.++--+.++.|. .+.|+.-.||.+.++|.++|++.. --||+|-.|=+-+-
T Consensus 197 vD~Ia~SfVr~a~Dv~~~r~~l~~~g~--~~~iiaKIE~~eav~nldeIl~~s-------------DgImVaRGDLgvei 261 (461)
T 3qtg_A 197 IDYVAISLAKSCKDVDSVRSLLTELGF--QSQVAVKIETKGAVNNLEELVQCS-------------DYVVVARGDLGLHY 261 (461)
T ss_dssp CCEEEECSCCSHHHHHHHHHHHHHTTC--CCEEEEEECSHHHHHTHHHHHHTC-------------SEEEEEHHHHTTTS
T ss_pred CCEEEecCCCCHHHHHHHHHHHHhcCC--CceEEEEECCHHHHHhHHHHHHhc-------------ccEEEccccccccC
Confidence 344578999999999999999988885 589999999999999999999861 36999999988888
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchh
Q 002112 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTH 647 (965)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~ 647 (965)
|. ..+..+|+++...|+++|..+..==--=.|+=...-||-
T Consensus 262 ~~----e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTR 302 (461)
T 3qtg_A 262 GL----DALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTR 302 (461)
T ss_dssp CT----TTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCH
T ss_pred CH----HHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccH
Confidence 74 489999999999999999988763333334444445763
No 11
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=89.98 E-value=0.33 Score=53.89 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=77.4
Q ss_pred chhhHHhccCCChhhHHHHHHHHH----HcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeecc
Q 002112 522 SFGAYIISMATAPSDVLAVELLQR----ECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSD 597 (965)
Q Consensus 522 ~~~~yIISmt~sasDvL~vl~L~k----e~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSD 597 (965)
.+...++.|++++.||-.+.-+.+ ..|+..++.|+|+.||...+.|+.+|.. . .+..-+++|-.|
T Consensus 111 g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa----~-------~rv~~L~~G~~D 179 (332)
T 3qqw_A 111 RLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAE----L-------PNIEVLDFGLMD 179 (332)
T ss_dssp CCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTT----S-------TTEEEEEECHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhc----C-------cCCCEEEEcHHH
Confidence 345689999999999988755544 4577668999999999999999998873 2 357789999888
Q ss_pred CCcchhhH--------hHHH---HHHHHHHHHHHHHHHhCCeEEEecCC
Q 002112 598 SGKDAGRL--------SAAW---QLYKTQEELVKVAKQYGVKLTMFHGR 635 (965)
Q Consensus 598 S~KDgG~l--------aa~W---~Ly~Aq~~L~~va~~~gV~l~~FHGR 635 (965)
=..+-|.- ...| .+..+..+++..|+.+|+.. ++|=
T Consensus 180 L~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~--id~v 226 (332)
T 3qqw_A 180 FVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVP--AHNV 226 (332)
T ss_dssp HHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred HHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCc--ccCC
Confidence 77775531 1223 26788889999999999975 5653
No 12
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=89.45 E-value=0.6 Score=51.92 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=79.4
Q ss_pred chhhHHhccCCChhhHHHHHHHHH----HcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeecc
Q 002112 522 SFGAYIISMATAPSDVLAVELLQR----ECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSD 597 (965)
Q Consensus 522 ~~~~yIISmt~sasDvL~vl~L~k----e~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSD 597 (965)
.+...++.|++++.||-.+.-+.+ ++|+...+.|.|+.||...+.|+.+|.. . .+..-+++|-.|
T Consensus 110 g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa----~-------~rv~~L~~G~~D 178 (339)
T 3r4i_A 110 APAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAA----L-------PGVEALSFGLMD 178 (339)
T ss_dssp CCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHT----C-------TTEEEEEECHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHc----C-------cCCCEEEECHHH
Confidence 455689999999999988755544 4577667899999999999999999883 1 357789999888
Q ss_pred CCcchhh--------HhHHHH---HHHHHHHHHHHHHHhCCeEEEecCCCCCC
Q 002112 598 SGKDAGR--------LSAAWQ---LYKTQEELVKVAKQYGVKLTMFHGRGGTV 639 (965)
Q Consensus 598 S~KDgG~--------laa~W~---Ly~Aq~~L~~va~~~gV~l~~FHGRGGsv 639 (965)
=..+-|. ....|. +..|...++..|+.+|+.. ++|==+-+
T Consensus 179 L~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~--id~v~~d~ 229 (339)
T 3r4i_A 179 FVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVP--SHNVSTEV 229 (339)
T ss_dssp HHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEE--EECCCCCS
T ss_pred HHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCC--ccCCCcCC
Confidence 7777653 123443 6788899999999999975 56544444
No 13
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=89.37 E-value=0.41 Score=55.97 Aligned_cols=87 Identities=15% Similarity=0.231 Sum_probs=76.5
Q ss_pred HHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcchhhH
Q 002112 526 YIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRL 605 (965)
Q Consensus 526 yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~l 605 (965)
..+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++.- --||+|--|=+-+-|.
T Consensus 234 Ia~SFVr~a~Dv~~~r~~l~~~g--~~i~IIAKIE~~eav~nldeIl~~s-------------DGIMVARGDLgvEi~~- 297 (520)
T 3khd_A 234 IAASFIQSADDVRLIRNLLGPRG--RHIKIIPKIENIEGIIHFDKILAES-------------DGIMIARGDLGMEISP- 297 (520)
T ss_dssp EEETTCCSHHHHHHHHHHHTTTT--TTSEEEEEECSHHHHHTHHHHHHHS-------------SCEEECHHHHTTTSCG-
T ss_pred EEECCCCCHHHHHHHHHHHHhcC--CCCcEEEEECCHHHHHhHHHHHHhC-------------CcEEEccccccccCCH-
Confidence 45799999999999998888877 3789999999999999999999872 2599999998888876
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 606 SAAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 606 aa~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
..+..+|+++...|+++|..+..
T Consensus 298 ---e~vp~~Qk~iI~~c~~aGKPVi~ 320 (520)
T 3khd_A 298 ---EKVFLAQKLMISKCNLQGKPIIT 320 (520)
T ss_dssp ---GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ---HHHHHHHHHHHHHHHHcCCCeEE
Confidence 48999999999999999988774
No 14
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=89.24 E-value=0.39 Score=55.93 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=85.5
Q ss_pred HHHHhCCCcchhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEE
Q 002112 513 HVISELPADSFGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVM 592 (965)
Q Consensus 513 ~~i~~~~~~~~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVM 592 (965)
+...+.+.+ -..+|+.++++||.++--+.++.| ..+.|++-.||.+.++|.++|++.. --||
T Consensus 199 ~~~~~~~vD---~i~~sfVr~a~dv~~~r~~l~~~~--~~i~IiaKIE~~eav~nldeIl~~s-------------DgIm 260 (499)
T 3hqn_D 199 QFGVEQGVD---MIFASFIRSAEQVGDVRKALGPKG--RDIMIICKIENHQGVQNIDSIIEES-------------DGIM 260 (499)
T ss_dssp HHHHHTTCS---EEEETTCCSHHHHHHHHHHHCGGG--TTSEEEEEECSHHHHHTHHHHHHHS-------------SEEE
T ss_pred HHHHHcCCC---EEEecCCCCHHHHHHHHHHHHhcC--CCCeEEEEECCHHHHHhHHHHHHhC-------------CcEE
Confidence 334444443 456899999999999988887766 3789999999999999999999971 2699
Q ss_pred EeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCch
Q 002112 593 IGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPT 646 (965)
Q Consensus 593 lGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt 646 (965)
+|-.|=+-+-|. ..+..+|+++...|+++|..+..-=--=.|+=.-.-||
T Consensus 261 VaRGDLgvEi~~----e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PT 310 (499)
T 3hqn_D 261 VARGDLGVEIPA----EKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPT 310 (499)
T ss_dssp EEHHHHHHHSCH----HHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCC
T ss_pred EccccccCcCCH----HHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCcc
Confidence 999887777763 58999999999999999988776322223333333455
No 15
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=88.48 E-value=0.24 Score=53.16 Aligned_cols=98 Identities=17% Similarity=0.298 Sum_probs=77.5
Q ss_pred hhHHhccCCChhhHHHHHHHHHHc---------------CC----------CCCCccccccCChHHHhchHHHHHHHhcc
Q 002112 524 GAYIISMATAPSDVLAVELLQREC---------------RV----------KQPLRVVPLFEKLADLEAAPASVARLFSI 578 (965)
Q Consensus 524 ~~yIISmt~sasDvL~vl~L~ke~---------------Gl----------~~~l~VvPLFETi~DL~~a~~Im~~ll~~ 578 (965)
...+++|++++.|+-.+.-.+|.. |. ...+.|+++.||...+.|+++|.. .
T Consensus 90 ~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa----~ 165 (261)
T 3qz6_A 90 EGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILA----V 165 (261)
T ss_dssp CEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHT----S
T ss_pred CEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhC----C
Confidence 346899999999999987776531 11 136889999999999999999983 1
Q ss_pred HHHHhhcCCeeEEEEeeccCCcchhhHhH--HHHHHHHHHHHHHHHHHhCCeEEEe
Q 002112 579 DWYRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (965)
Q Consensus 579 p~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~va~~~gV~l~~F 632 (965)
.+.--+|+|-.|=+.+-|.... .=++..++.+++..|+++|+.+-++
T Consensus 166 -------~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~ 214 (261)
T 3qz6_A 166 -------QGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFF 214 (261)
T ss_dssp -------TTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred -------CCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 2467799999998887776431 2368899999999999999999776
No 16
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=88.29 E-value=0.48 Score=55.33 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=77.0
Q ss_pred hhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcch
Q 002112 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (965)
+--..+|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++.- --||+|-.|=+-+-
T Consensus 222 vD~Ia~SFVr~a~Dv~~~r~~l~~~~~--~~~iiaKIE~~eav~nldeIl~~s-------------DgimVaRGDLgvei 286 (511)
T 3gg8_A 222 CNFIAASFVQSADDVRYIRGLLGPRGR--HIRIIPKIENVEGLVNFDEILAEA-------------DGIMIARGDLGMEI 286 (511)
T ss_dssp CCEEEETTCCSHHHHHHHHHHHTGGGT--TCEEEEEECSHHHHHTHHHHHHHC-------------SCEEEEHHHHHHHS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhcCC--CCeEEEEECCHHHHHhHHHHHHhC-------------CeEEEecchhcCcC
Confidence 334567999999999999998888874 788999999999999999999872 25999988866666
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
| -..+..+|+++...|+++|..+..
T Consensus 287 ~----~e~v~~~qk~ii~~~~~~gkpvi~ 311 (511)
T 3gg8_A 287 P----PEKVFLAQKMMIAKCNVVGKPVIT 311 (511)
T ss_dssp C----HHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred C----HHHHHHHHHHHHHHHHHcCCCeEE
Confidence 5 368999999999999999988776
No 17
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=87.43 E-value=0.7 Score=50.17 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=75.1
Q ss_pred hHHhccCCChhhHHHHHHHHHHc--C---C--------------------CCCCccccccCChHHHhchHHHHHHHhccH
Q 002112 525 AYIISMATAPSDVLAVELLQREC--R---V--------------------KQPLRVVPLFEKLADLEAAPASVARLFSID 579 (965)
Q Consensus 525 ~yIISmt~sasDvL~vl~L~ke~--G---l--------------------~~~l~VvPLFETi~DL~~a~~Im~~ll~~p 579 (965)
..+++|++++.|+-++.-.+|.- | + ...+.|+++.||.+.+.|+++|+. .
T Consensus 114 ~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa----~- 188 (287)
T 2v5j_A 114 TLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILD----V- 188 (287)
T ss_dssp EEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHT----S-
T ss_pred EEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhC----c-
Confidence 56999999999988886655421 1 1 013779999999999999999973 1
Q ss_pred HHHhhcCCeeEEEEeeccCCcchhhHh--HHHHHHHHHHHHHHHHHHhCCeEEEe
Q 002112 580 WYRNRISGKQEVMIGYSDSGKDAGRLS--AAWQLYKTQEELVKVAKQYGVKLTMF 632 (965)
Q Consensus 580 ~yr~~l~~~QeVMlGYSDS~KDgG~la--a~W~Ly~Aq~~L~~va~~~gV~l~~F 632 (965)
.+.--||+|-.|=+.+-|... ..=++..++++++..|+++|+.+.+|
T Consensus 189 ------~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~ 237 (287)
T 2v5j_A 189 ------EGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL 237 (287)
T ss_dssp ------TTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred ------CCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe
Confidence 356789999999888877542 12357889999999999999998654
No 18
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=85.79 E-value=0.88 Score=54.26 Aligned_cols=87 Identities=20% Similarity=0.311 Sum_probs=76.0
Q ss_pred HHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcchhhH
Q 002112 526 YIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRL 605 (965)
Q Consensus 526 yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~l 605 (965)
..+|+.++++||.++--+.++.|- .+.|+.-.||.+.++|.++|++. . --||+|-.|=+-+-|.
T Consensus 210 Ia~SFVr~a~Dv~~~r~~l~~~~~--~i~IiaKIE~~eav~nldeIl~~--s-----------DGImVARGDLgvei~~- 273 (606)
T 3t05_A 210 IAASFVRRPSDVLEIREILEEQKA--NISVFPKIENQEGIDNIEEILEV--S-----------DGLMVARGDMGVEIPP- 273 (606)
T ss_dssp EEETTCCSHHHHHHHHHHHHHTTC--CCEEEECCCSHHHHHTHHHHHHH--C-----------SCEEEEHHHHHHHSCG-
T ss_pred EEECCCCCHHHHHHHHHHHHhcCC--CCeEEEEeCCHHHHHhHHHHHHh--C-----------CEEEEccccccCcCCH-
Confidence 357999999999999999888885 78999999999999999999996 1 2599999887766664
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 606 SAAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 606 aa~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
..+..+|+++.+.|+++|..+..
T Consensus 274 ---e~vp~~Qk~ii~~~~~~gkpvi~ 296 (606)
T 3t05_A 274 ---EKVPMVQKDLIRQCNKLGKPVIT 296 (606)
T ss_dssp ---GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred ---HHHHHHHHHHHHHHHHcCCCeEE
Confidence 58999999999999999998776
No 19
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=85.66 E-value=0.27 Score=54.81 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=74.0
Q ss_pred hHHhccCCChhhHHHHHHHHHHc--CCC----------------------------CCCccccccCChHHHhchHHHHHH
Q 002112 525 AYIISMATAPSDVLAVELLQREC--RVK----------------------------QPLRVVPLFEKLADLEAAPASVAR 574 (965)
Q Consensus 525 ~yIISmt~sasDvL~vl~L~ke~--Gl~----------------------------~~l~VvPLFETi~DL~~a~~Im~~ 574 (965)
..+++|++++.|+-++.-+++.. |.. ..+.|+++.||...+.|+++|+.
T Consensus 120 gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa- 198 (339)
T 1izc_A 120 GIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAA- 198 (339)
T ss_dssp EEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHT-
T ss_pred EEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhc-
Confidence 37999999999999998887752 210 13679999999999999999973
Q ss_pred HhccHHHHhhcCCeeEEEEeeccCCcc--------hhhHhHHHHHHHHHHHHHHHHHHhCCeE
Q 002112 575 LFSIDWYRNRISGKQEVMIGYSDSGKD--------AGRLSAAWQLYKTQEELVKVAKQYGVKL 629 (965)
Q Consensus 575 ll~~p~yr~~l~~~QeVMlGYSDS~KD--------gG~laa~W~Ly~Aq~~L~~va~~~gV~l 629 (965)
. .+.--||||-.|=+.+ -|+-. .-++..++.+++..|+++|+.+
T Consensus 199 ---~-------~~vD~l~iG~~DLs~~~~~~~~~~lG~~~-~p~v~~a~~~iv~aaraaGk~~ 250 (339)
T 1izc_A 199 ---M-------PEIHGLMFGPGDYMIDAGLDLNGALSGVP-HPTFVEAMTKFSTAAQRNGVPI 250 (339)
T ss_dssp ---C-------TTCCCEEECHHHHHHHTTCCTTCCTTSCC-CHHHHHHHHHHHHHHHHTTCCE
T ss_pred ---C-------CCCCEEEECHHHHHhhhhcccchhhCCCC-CHHHHHHHHHHHHHHHHhCCce
Confidence 2 2456799998887666 55433 5678999999999999999987
No 20
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=85.17 E-value=0.92 Score=54.01 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=79.1
Q ss_pred hhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcch
Q 002112 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (965)
+.-.++||.++++|+.++.-++++.|. ..+.|+.-.||.+.++|.++|++.- =-||+|-.|=+=.-
T Consensus 187 ~d~v~~sfV~~a~dv~~~~~~l~~~~~-~~~~iiakIE~~eav~nldeIl~~~-------------DgImVargDLgvei 252 (587)
T 2e28_A 187 IDFIAASFVRRASDVLEIRELLEAHDA-LHIQIIAKIENEEGVANIDEILEAA-------------DGLMVARGDLGVEI 252 (587)
T ss_dssp CSEEEESSCCSHHHHHHHHHHHHHTTC-TTSEEEEEECSHHHHHTHHHHHHHS-------------SEEEEEHHHHHHHS
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHcCC-CCceEEEEECCHHHHHhHHHHHHhC-------------CEEEEcCchhhhhc
Confidence 334578999999999999988888874 3688999999999999999999972 26999999988888
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 603 GRLSAAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 603 G~laa~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
|+ ..+..+|+++.+.|+++|..+..
T Consensus 253 ~~----~~v~~~qk~ii~~~~~~gkpvi~ 277 (587)
T 2e28_A 253 PA----EEVPLIQKLLIKKSNMLGKPVIT 277 (587)
T ss_dssp CG----GGHHHHHHHHHHHHHHHTCCEEE
T ss_pred CH----HHHHHHHHHHHHHHHHcCCCeEE
Confidence 85 88999999999999999998765
No 21
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=79.62 E-value=0.9 Score=48.71 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=75.1
Q ss_pred hHHhccCCChhhHHHHHHHHHHc-----------------CC--------CCCCccccccCChHHHhchHHHHHHHhccH
Q 002112 525 AYIISMATAPSDVLAVELLQREC-----------------RV--------KQPLRVVPLFEKLADLEAAPASVARLFSID 579 (965)
Q Consensus 525 ~yIISmt~sasDvL~vl~L~ke~-----------------Gl--------~~~l~VvPLFETi~DL~~a~~Im~~ll~~p 579 (965)
..+++|++++.|+-++.-.+|.- |. ...+.|+++.||.+.+.|+++|.. .
T Consensus 93 ~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~----~- 167 (267)
T 2vws_A 93 TLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILD----V- 167 (267)
T ss_dssp EEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHT----S-
T ss_pred EEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhC----C-
Confidence 57899999999988886655421 10 013779999999999999999973 2
Q ss_pred HHHhhcCCeeEEEEeeccCCcchhhHhH--HHHHHHHHHHHHHHHHHhCCeEEEe
Q 002112 580 WYRNRISGKQEVMIGYSDSGKDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMF 632 (965)
Q Consensus 580 ~yr~~l~~~QeVMlGYSDS~KDgG~laa--~W~Ly~Aq~~L~~va~~~gV~l~~F 632 (965)
.+.--+|+|-.|=+.+-|.... .=++..++.+++..|+++|+.+.+|
T Consensus 168 ------~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~ 216 (267)
T 2vws_A 168 ------EGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL 216 (267)
T ss_dssp ------TTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ------CCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 3567799999998888885321 1258899999999999999998775
No 22
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=78.58 E-value=0.89 Score=48.93 Aligned_cols=86 Identities=17% Similarity=0.201 Sum_probs=68.1
Q ss_pred hhhHHhccCCChhhHHHHHHHHHHcCCCCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcch
Q 002112 523 FGAYIISMATAPSDVLAVELLQRECRVKQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKDA 602 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L~ke~Gl~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDg 602 (965)
+..+++.|++++.|+-.+- .+.|+|+.||...+.|+.+|.. ..+..-+++|-.|=..+-
T Consensus 85 ~~gi~lPKv~s~~~v~~~~----------~~~i~~~IET~~~v~~~~eIaa-----------~~~v~~l~~G~~Dl~~~l 143 (273)
T 1u5h_A 85 YTTVMLPKAESAAQVIELA----------PRDVIALVETARGAVCAAEIAA-----------ADPTVGMMWGAEDLIATL 143 (273)
T ss_dssp CCEEEETTCCCHHHHHTTT----------TSEEEEEECSHHHHHTHHHHHH-----------STTEEEEEECHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHh----------hCCEEEEEeCHHHHHhHHHHhc-----------CCCCcEEEecHHHHHHHh
Confidence 4568999999999987542 6889999999999999988861 246778999988877777
Q ss_pred hhHhH-------HHHHHHHHHHHHHHHHHhCCeE
Q 002112 603 GRLSA-------AWQLYKTQEELVKVAKQYGVKL 629 (965)
Q Consensus 603 G~laa-------~W~Ly~Aq~~L~~va~~~gV~l 629 (965)
|.-.. .=.+..|..+++..|+.+|+..
T Consensus 144 G~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~a 177 (273)
T 1u5h_A 144 GGSSSRRADGAYRDVARHVRSTILLAASAFGRLA 177 (273)
T ss_dssp TCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCCccccccHHHHHHHHHHHHHHHHcCCCc
Confidence 75321 1147788889999999999965
No 23
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=72.10 E-value=2.7 Score=48.09 Aligned_cols=121 Identities=12% Similarity=0.086 Sum_probs=83.1
Q ss_pred HHHHH-HHHHHHHHHh---CCCcchhhHHhccCCChhhHHHHHHHH----HHcCCCC-CCccccccCChHH---HhchHH
Q 002112 503 EEIAD-VLDTFHVISE---LPADSFGAYIISMATAPSDVLAVELLQ----RECRVKQ-PLRVVPLFEKLAD---LEAAPA 570 (965)
Q Consensus 503 ~~~~e-~l~~f~~i~~---~~~~~~~~yIISmt~sasDvL~vl~L~----ke~Gl~~-~l~VvPLFETi~D---L~~a~~ 570 (965)
..+.. ..+-+..+.. .....+..+++.+++++.||-.+.-+. +..|+.. ++.|+|+.||... |.|+.+
T Consensus 92 ~~T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~e 171 (433)
T 3oyz_A 92 PETRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRD 171 (433)
T ss_dssp HHHHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHH
T ss_pred CCChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHH
Confidence 34444 4454555543 111355668999999999998775443 4568754 7999999999999 999999
Q ss_pred HHHHHhccHHHHhhcCCeeEEEEeeccCCcchhhHhHH---HHHHHHHHHHHHHHHHhCCeE
Q 002112 571 SVARLFSIDWYRNRISGKQEVMIGYSDSGKDAGRLSAA---WQLYKTQEELVKVAKQYGVKL 629 (965)
Q Consensus 571 Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~laa~---W~Ly~Aq~~L~~va~~~gV~l 629 (965)
|.... ++...+..-+++|-.|=+++-|.-... =.+..|...++..|+.+|+..
T Consensus 172 IAaas------r~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~a 227 (433)
T 3oyz_A 172 EMGKP------TNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVA 227 (433)
T ss_dssp HHHCT------TCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHhhh------ccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCc
Confidence 97621 000125677899988887777765332 135567778899999999864
No 24
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=51.77 E-value=25 Score=41.25 Aligned_cols=107 Identities=12% Similarity=0.178 Sum_probs=81.8
Q ss_pred hhhHHhccCCChhhHHHHHHHHHHcCC-----CCCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeecc
Q 002112 523 FGAYIISMATAPSDVLAVELLQRECRV-----KQPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSD 597 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L~ke~Gl-----~~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSD 597 (965)
+--+-+|..++++||.++--+.++.|- ...+.|+.=+|+.+.++|-++|++. -=-||+.--|
T Consensus 230 vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~-------------sDgIMVARGD 296 (526)
T 4drs_A 230 LDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSE-------------SDGIMVARGD 296 (526)
T ss_dssp CSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHH-------------SSEEEEECTT
T ss_pred cCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhh-------------ccEEEEECCc
Confidence 334567999999999999988888764 2578899999999999999999986 2358997766
Q ss_pred CCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCch
Q 002112 598 SGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPT 646 (965)
Q Consensus 598 S~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt 646 (965)
=+-+-| -..+..+|+++.+.|+++|..+..==--=.|+=.-.-||
T Consensus 297 LgvEip----~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PT 341 (526)
T 4drs_A 297 LGMEIP----PEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPT 341 (526)
T ss_dssp HHHHSC----GGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCC
T ss_pred ccccCC----HHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCC
Confidence 544444 468999999999999999999886433333444444454
No 25
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=39.41 E-value=15 Score=42.32 Aligned_cols=50 Identities=34% Similarity=0.689 Sum_probs=35.1
Q ss_pred CCeeEEEE----eeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEE---ecCCCCCCCC
Q 002112 586 SGKQEVMI----GYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTM---FHGRGGTVGR 641 (965)
Q Consensus 586 ~~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~---FHGRGGsvgR 641 (965)
.|+--||+ |.--+..++ -=+|+=|+ +|.++++++|.|++. ||+.||.||=
T Consensus 46 ~GVdGVmvDVWWGiVE~~~P~---~YdWsgY~---~L~~mv~~~GLKlq~vmSFHqCGgNVGD 102 (498)
T 1fa2_A 46 GGCDGVMVDVWWGIIEAKGPK---QYDWSAYR---ELFQLVKKCGLKIQAIMSFHQCGGNVGD 102 (498)
T ss_dssp TTCCEEEEEEEHHHHTCSBTT---BCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCCTTC
T ss_pred cCCCEEEEEeEeeeeccCCCC---ccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 35666777 333322222 23788886 789999999999854 9999999975
No 26
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=38.73 E-value=16 Score=42.17 Aligned_cols=50 Identities=30% Similarity=0.654 Sum_probs=35.0
Q ss_pred CCeeEEEE----eeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEE---ecCCCCCCCC
Q 002112 586 SGKQEVMI----GYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTM---FHGRGGTVGR 641 (965)
Q Consensus 586 ~~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~---FHGRGGsvgR 641 (965)
.|+--||+ |.--+..++ -=+|+=|+ +|.++++++|.|++. ||+.||.||=
T Consensus 45 ~GVdGVmvDVWWGiVE~~~P~---~YdWsgY~---~l~~mv~~~GLKlq~vmSFHqCGgNVGD 101 (495)
T 1wdp_A 45 AGVDGVMVDVWWGIIELKGPK---QYDWRAYR---SLLQLVQECGLTLQAIMSFHQCGGNVGD 101 (495)
T ss_dssp TTCCEEEEEEEHHHHTCSSTT---CCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCSTTC
T ss_pred cCCCEEEEEeEeeeeccCCCC---ccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 35666777 333322222 23788886 789999999999854 9999999975
No 27
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=36.28 E-value=18 Score=41.96 Aligned_cols=50 Identities=34% Similarity=0.686 Sum_probs=34.9
Q ss_pred CCeeEEEE----eeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEE---ecCCCCCCCC
Q 002112 586 SGKQEVMI----GYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTM---FHGRGGTVGR 641 (965)
Q Consensus 586 ~~~QeVMl----GYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~---FHGRGGsvgR 641 (965)
.++--||+ |.--+..++ -=+|+=|+ +|.++++++|.|++. ||..||.||=
T Consensus 43 ~GVdGVmvDVWWGiVE~~~P~---~YdWsgY~---~L~~mvr~~GLKlq~vmSFHqCGgNVGD 99 (535)
T 2xfr_A 43 AGVDGVMVDVWWGLVEGKGPK---AYDWSAYK---QLFELVQKAGLKLQAIMSFHQCGGNVGD 99 (535)
T ss_dssp TTCCEEEEEEEHHHHTCSSTT---CCCCHHHH---HHHHHHHHTTCEEEEEEECSCBCCSTTC
T ss_pred cCCCEEEEEeEeeeeccCCCC---ccCcHHHH---HHHHHHHHcCCeEEEEEEeeecCCCCCC
Confidence 35666777 333322221 23788886 789999999999854 9999999875
No 28
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=29.88 E-value=12 Score=41.27 Aligned_cols=148 Identities=13% Similarity=0.096 Sum_probs=87.8
Q ss_pred hhhHHhccCCChhhHHHHHHHHH-------HcCCC--CCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEE
Q 002112 523 FGAYIISMATAPSDVLAVELLQR-------ECRVK--QPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMI 593 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L~k-------e~Gl~--~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMl 593 (965)
...-+|-|.+++++|..+.-+.+ ..|.. ..+.|.+..||...+.++++|... ..-+.|
T Consensus 136 ~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~-------------vD~~si 202 (324)
T 2xz9_A 136 NVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE-------------VDFFSI 202 (324)
T ss_dssp CEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT-------------CSEEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh-------------CcEEEE
Confidence 34558899999999777655543 23653 358899999999999999999843 234555
Q ss_pred eeccCC----------cchhhHhH--HHHHHHHHHHHHHHHHHhCCeEEEecCCCCCCCCCCCchhh-hhhcCCCCcccC
Q 002112 594 GYSDSG----------KDAGRLSA--AWQLYKTQEELVKVAKQYGVKLTMFHGRGGTVGRGGGPTHL-AILSQPPDTIHG 660 (965)
Q Consensus 594 GYSDS~----------KDgG~laa--~W~Ly~Aq~~L~~va~~~gV~l~~FHGRGGsvgRGGGPt~~-ailaqP~gs~~g 660 (965)
|-.|=. ...|.+-- .=++.++-..+++.|+++|+.+.++ |. + +|-|..- ....+ |- ++
T Consensus 203 GtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvc---ge-~--~~dp~~~~~l~~l--G~-~~ 273 (324)
T 2xz9_A 203 GTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMC---GE-M--AGDPLAAVILLGL--GL-DE 273 (324)
T ss_dssp CHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEEC---SG-G--GGCHHHHHHHHHH--TC-CE
T ss_pred CHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeec---Cc-c--CCCHHHHHHHHHC--CC-CE
Confidence 544432 21122111 2358889999999999999998664 22 2 3345322 23333 22 12
Q ss_pred ceeeecccchhhhhcCChhHHHHHHHHHHHHHHH
Q 002112 661 SLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLE 694 (965)
Q Consensus 661 ~ir~TeQGEvI~~kyg~~~~A~r~Le~~~aa~l~ 694 (965)
-.--..|...+..-|..-.. ..++.++..++.
T Consensus 274 ~si~p~~i~~~~~~~~~~~~--~~~~~~~~~~l~ 305 (324)
T 2xz9_A 274 FSMSATSIPEIKNIIRNVEY--EKAKEIAEKALN 305 (324)
T ss_dssp EEECGGGHHHHHHHHTTSCH--HHHHHHHHHHHT
T ss_pred EEEChhHHHHHHHHHHHcCH--HHHHHHHHHHHc
Confidence 12223455555555554433 334444444443
No 29
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=29.72 E-value=43 Score=39.28 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=65.0
Q ss_pred hhHHhccCCChhhHHHHHHH----HHHcCCC-CCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccC
Q 002112 524 GAYIISMATAPSDVLAVELL----QRECRVK-QPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDS 598 (965)
Q Consensus 524 ~~yIISmt~sasDvL~vl~L----~ke~Gl~-~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS 598 (965)
..+++..++++.|+-.+--+ .+..|+. .++.+.+|.||+..+.|..+|+..+ +. +..-+..|.-|=
T Consensus 208 ~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al------~~---rv~gLn~G~~Dy 278 (532)
T 3cuz_A 208 PYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHAL------RD---HIVGLNCGRWDY 278 (532)
T ss_dssp CEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHT------TT---TEEEEECCSHHH
T ss_pred CeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhc------cC---CceEEEcCHHHH
Confidence 45788999999998766333 3456885 5799999999999999999998543 23 345577776664
Q ss_pred Ccchhh-------H----------hHHHHHHHHHHHHH-HHHHHhCCeE
Q 002112 599 GKDAGR-------L----------SAAWQLYKTQEELV-KVAKQYGVKL 629 (965)
Q Consensus 599 ~KDgG~-------l----------aa~W~Ly~Aq~~L~-~va~~~gV~l 629 (965)
..|-+. + .+-| ..|..++. ..|+.+|+..
T Consensus 279 ~~s~i~~~~~~~~~~lpdr~~~~~~~~~--l~Ay~~llv~ac~a~G~~a 325 (532)
T 3cuz_A 279 IFSYIKTLKNYPDRVLPDRQAVTMDKPF--LNAYSRLLIKTCHKRGAFA 325 (532)
T ss_dssp HHHHHHHTTTCGGGCCCCGGGCCTTSHH--HHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhcccCCCccCccccccccchHH--HHHHHHHHHHHHHHcCCCC
Confidence 443311 1 2223 44555555 8899999853
No 30
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=27.17 E-value=70 Score=39.41 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=68.7
Q ss_pred hHHhccCCChhhHHHHHHHHHHcCCC--CC-CccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeeccCCcc
Q 002112 525 AYIISMATAPSDVLAVELLQRECRVK--QP-LRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSDSGKD 601 (965)
Q Consensus 525 ~yIISmt~sasDvL~vl~L~ke~Gl~--~~-l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSDS~KD 601 (965)
.-+|-|++++.++-.+.-++++.|+. .. +.|.+..||...+.++++|.+. + --+.||-.|=+.+
T Consensus 643 ~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~----------v---D~~siGtnDLtq~ 709 (794)
T 2ols_A 643 EIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQY----------F---DGFSIGSNDMTQL 709 (794)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTT----------S---SEEEEEHHHHHHH
T ss_pred eEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHh----------C---CEEEECHHHHHHH
Confidence 46899999999999999999999985 23 7899999999999999999853 2 2233333322221
Q ss_pred -hh------hHh-----HHHHHHHHHHHHHHHHHHhCCeEEE
Q 002112 602 -AG------RLS-----AAWQLYKTQEELVKVAKQYGVKLTM 631 (965)
Q Consensus 602 -gG------~la-----a~W~Ly~Aq~~L~~va~~~gV~l~~ 631 (965)
-| .++ .+=++.++-+.+++.|+++|+.+.+
T Consensus 710 tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgi 751 (794)
T 2ols_A 710 TLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGI 751 (794)
T ss_dssp HHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence 11 111 1235888999999999999999854
No 31
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=22.19 E-value=2e+02 Score=31.73 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=27.9
Q ss_pred CCeeEEEEeeccCCcchhhHhHHHHHHHHHHHHHHHHHHhCCeEEEecCCC
Q 002112 586 SGKQEVMIGYSDSGKDAGRLSAAWQLYKTQEELVKVAKQYGVKLTMFHGRG 636 (965)
Q Consensus 586 ~~~QeVMlGYSDS~KDgG~laa~W~Ly~Aq~~L~~va~~~gV~l~~FHGRG 636 (965)
+...-||+ |-+| ||...+ .++.++|+++|+++.+ |+-.
T Consensus 281 ~~~d~v~i---k~~~-GGit~~--------~~i~~~A~~~g~~~~~-h~~~ 318 (388)
T 2nql_A 281 CRIAIVQP---EMGH-KGITNF--------IRIGALAAEHGIDVIP-HATV 318 (388)
T ss_dssp SCCSEECC---CHHH-HCHHHH--------HHHHHHHHHHTCEECC-CCCS
T ss_pred CCCCEEEe---cCCC-CCHHHH--------HHHHHHHHHcCCeEEe-ecCC
Confidence 34566777 8889 886543 3789999999999766 7543
No 32
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=22.05 E-value=1.4e+02 Score=35.01 Aligned_cols=95 Identities=8% Similarity=0.007 Sum_probs=65.6
Q ss_pred hhhHHhccCCChhhHHHHHHH----HHHcCCC-CCCccccccCChHHHhchHHHHHHHhccHHHHhhcCCeeEEEEeecc
Q 002112 523 FGAYIISMATAPSDVLAVELL----QRECRVK-QPLRVVPLFEKLADLEAAPASVARLFSIDWYRNRISGKQEVMIGYSD 597 (965)
Q Consensus 523 ~~~yIISmt~sasDvL~vl~L----~ke~Gl~-~~l~VvPLFETi~DL~~a~~Im~~ll~~p~yr~~l~~~QeVMlGYSD 597 (965)
+ .+++..++++.|+-.+--+ .+..|+. .++.+.+|.||+..+-|..+|+..+ +.|+ --+.+|.-|
T Consensus 205 p-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~------~~rv---~gLn~G~~D 274 (528)
T 3cux_A 205 P-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYEL------KDHS---AGLNCGRWD 274 (528)
T ss_dssp C-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHT------GGGE---EEEEECSHH
T ss_pred C-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhc------cCce---eEEecCHHH
Confidence 5 7889999999999877433 3457885 4899999999999999999999554 4444 336677665
Q ss_pred CCcchh--------hH---------hHHHHHHHHHHHHHHHHHHhCCe
Q 002112 598 SGKDAG--------RL---------SAAWQLYKTQEELVKVAKQYGVK 628 (965)
Q Consensus 598 S~KDgG--------~l---------aa~W~Ly~Aq~~L~~va~~~gV~ 628 (965)
=..|-| ++ ++-|--.. .+.++..|+.+|+.
T Consensus 275 y~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay-~~~lV~ac~a~G~~ 321 (528)
T 3cux_A 275 YIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAY-SLKVIQTCHRRNAP 321 (528)
T ss_dssp HHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHH-HHHHHHHHHHTTCC
T ss_pred HHHHhhhhccCCccccchhhhhcccccHHHHHH-HHHHHHHHHHcCCC
Confidence 443333 11 22243332 35677889999975
No 33
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=20.07 E-value=45 Score=36.87 Aligned_cols=23 Identities=35% Similarity=0.655 Sum_probs=14.1
Q ss_pred HhccHHHHhhcCCeeEEEEeeccCC
Q 002112 575 LFSIDWYRNRISGKQEVMIGYSDSG 599 (965)
Q Consensus 575 ll~~p~yr~~l~~~QeVMlGYSDS~ 599 (965)
||+++.|....+ .-+.+||||-+
T Consensus 93 L~d~~~~~~~~~--~K~~iGySDiT 115 (346)
T 4eys_A 93 LFENDQLQKVIK--QKIFLGFSDTT 115 (346)
T ss_dssp HHTTSHHHHHCC--CCEEEECTTHH
T ss_pred hhchhhhhHhhC--CcEEEEecHHH
Confidence 444444443323 47999999976
Done!