Query 002117
Match_columns 964
No_of_seqs 384 out of 1918
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 16:53:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002117.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002117hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 1E-273 2E-278 2401.8 80.2 962 1-964 129-1094(1094)
2 PLN02400 cellulose synthase 100.0 4E-267 9E-272 2354.7 78.0 928 31-963 141-1085(1085)
3 PLN02638 cellulose synthase A 100.0 4E-263 9E-268 2319.5 77.3 946 1-963 112-1079(1079)
4 PLN02915 cellulose synthase A 100.0 3E-258 7E-263 2272.1 77.6 875 79-963 137-1044(1044)
5 PLN02189 cellulose synthase 100.0 1E-251 3E-256 2215.0 75.7 904 1-963 127-1040(1040)
6 PLN02195 cellulose synthase A 100.0 8E-247 2E-251 2164.9 76.7 862 92-963 108-977 (977)
7 PLN02248 cellulose synthase-li 100.0 3E-221 7E-226 1955.6 69.9 784 139-951 262-1125(1135)
8 PF03552 Cellulose_synt: Cellu 100.0 9E-216 2E-220 1864.1 48.7 713 241-957 1-720 (720)
9 PLN02190 cellulose synthase-li 100.0 6E-199 1E-203 1726.4 63.8 725 143-943 7-756 (756)
10 PLN02893 Cellulose synthase-li 100.0 1E-190 2E-195 1664.7 66.5 706 142-941 9-728 (734)
11 TIGR03030 CelA cellulose synth 100.0 4.1E-67 8.8E-72 633.3 49.1 490 162-916 57-560 (713)
12 PRK11498 bcsA cellulose syntha 100.0 8.6E-67 1.9E-71 631.6 47.2 472 164-916 189-673 (852)
13 PRK05454 glucosyltransferase M 100.0 1.1E-35 2.4E-40 356.6 48.4 361 160-760 40-419 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 7.5E-34 1.6E-38 305.6 21.6 182 406-713 67-253 (254)
15 COG1215 Glycosyltransferases, 100.0 1.3E-30 2.8E-35 295.5 28.0 233 238-717 53-290 (439)
16 PRK14583 hmsR N-glycosyltransf 100.0 1.2E-28 2.7E-33 283.9 31.9 230 236-718 72-307 (444)
17 PRK11204 N-glycosyltransferase 100.0 1.9E-27 4.1E-32 270.6 33.1 236 235-718 50-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 1.6E-27 3.4E-32 274.6 32.2 288 235-769 45-341 (439)
19 PRK14716 bacteriophage N4 adso 99.9 3.8E-25 8.3E-30 258.1 30.6 266 236-743 63-355 (504)
20 cd06421 CESA_CelA_like CESA_Ce 99.9 2.3E-25 4.9E-30 230.1 18.9 229 239-715 1-234 (234)
21 PRK11234 nfrB bacteriophage N4 99.9 1.4E-24 3.1E-29 262.4 27.5 170 422-716 132-334 (727)
22 cd06437 CESA_CaSu_A2 Cellulose 99.9 1.3E-24 2.8E-29 226.8 21.4 228 239-711 1-232 (232)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 4.1E-23 8.9E-28 215.1 21.7 173 408-717 58-234 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 4.1E-23 8.8E-28 217.6 20.6 232 239-717 1-236 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 1.9E-23 4.2E-28 216.0 7.4 224 239-710 1-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.8 2.4E-19 5.2E-24 215.4 29.7 172 421-716 139-342 (703)
27 TIGR03472 HpnI hopanoid biosyn 99.8 7.1E-20 1.5E-24 206.9 23.5 235 236-711 38-272 (373)
28 cd04190 Chitin_synth_C C-termi 99.8 4.1E-21 8.9E-26 204.2 11.3 52 660-713 190-243 (244)
29 cd04192 GT_2_like_e Subfamily 99.8 1.2E-19 2.7E-24 186.2 16.7 226 243-710 1-229 (229)
30 cd02520 Glucosylceramide_synth 99.8 3.4E-19 7.3E-24 182.2 15.8 195 239-710 1-195 (196)
31 cd06434 GT2_HAS Hyaluronan syn 99.8 6.5E-18 1.4E-22 175.4 17.2 59 421-488 62-120 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.8 1.4E-17 3.1E-22 175.1 19.0 127 235-487 25-151 (251)
33 COG2943 MdoH Membrane glycosyl 99.8 2E-15 4.3E-20 171.3 37.1 211 407-750 213-428 (736)
34 TIGR03469 HonB hopene-associat 99.7 1.9E-16 4.1E-21 179.9 24.6 133 235-481 36-169 (384)
35 cd02525 Succinoglycan_BP_ExoA 99.7 2.1E-15 4.6E-20 156.8 19.5 54 662-717 180-233 (249)
36 PF13632 Glyco_trans_2_3: Glyc 99.6 1.9E-15 4.1E-20 153.6 14.3 138 443-711 1-143 (193)
37 cd06436 GlcNAc-1-P_transferase 99.5 5.1E-14 1.1E-18 144.1 12.8 115 407-528 51-175 (191)
38 cd06438 EpsO_like EpsO protein 99.4 6.6E-13 1.4E-17 134.3 10.9 102 421-528 61-167 (183)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.4 8.1E-12 1.7E-16 126.7 17.1 122 239-484 1-123 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.4 1.7E-11 3.8E-16 124.4 16.9 65 408-486 57-122 (201)
41 PF13506 Glyco_transf_21: Glyc 99.3 1.4E-11 3.1E-16 126.3 9.9 156 420-709 14-175 (175)
42 cd06433 GT_2_WfgS_like WfgS an 99.2 4.3E-10 9.3E-15 112.5 15.9 56 422-486 61-117 (202)
43 PF03142 Chitin_synth_2: Chiti 99.2 9.6E-09 2.1E-13 121.1 29.4 54 661-716 324-379 (527)
44 cd02522 GT_2_like_a GT_2_like_ 99.2 1.1E-09 2.4E-14 112.6 17.3 40 241-286 1-40 (221)
45 cd04196 GT_2_like_d Subfamily 99.2 6.8E-10 1.5E-14 113.0 15.5 57 421-486 64-121 (214)
46 cd02510 pp-GalNAc-T pp-GalNAc- 99.1 1.7E-09 3.7E-14 118.3 19.4 110 243-469 2-111 (299)
47 cd04186 GT_2_like_c Subfamily 99.1 1.8E-09 3.8E-14 104.9 14.9 51 422-481 60-111 (166)
48 cd06420 GT2_Chondriotin_Pol_N 99.1 3.3E-09 7.1E-14 105.9 15.7 52 422-484 65-116 (182)
49 cd06913 beta3GnTL1_like Beta 1 99.1 3.3E-09 7.3E-14 110.0 15.7 41 243-288 1-41 (219)
50 PLN02726 dolichyl-phosphate be 99.0 1E-08 2.2E-13 108.8 17.0 60 408-481 70-129 (243)
51 cd06423 CESA_like CESA_like is 99.0 7.6E-09 1.6E-13 99.3 14.2 63 408-484 55-118 (180)
52 cd02526 GT2_RfbF_like RfbF is 99.0 3.9E-09 8.3E-14 110.0 12.7 66 408-485 49-118 (237)
53 cd04185 GT_2_like_b Subfamily 99.0 1.8E-08 3.9E-13 102.8 16.4 56 422-484 62-117 (202)
54 PF00535 Glycos_transf_2: Glyc 98.9 1.2E-09 2.5E-14 105.2 5.9 110 407-528 54-165 (169)
55 cd06442 DPM1_like DPM1_like re 98.9 2.6E-08 5.7E-13 102.7 15.9 52 422-482 64-115 (224)
56 PRK10073 putative glycosyl tra 98.7 3.7E-07 8.1E-12 102.5 17.3 110 237-469 4-113 (328)
57 cd04188 DPG_synthase DPG_synth 98.7 2.9E-07 6.4E-12 95.0 13.7 52 423-483 69-120 (211)
58 TIGR01556 rhamnosyltran L-rham 98.6 6.6E-07 1.4E-11 97.0 16.3 69 407-485 46-114 (281)
59 cd04179 DPM_DPG-synthase_like 98.6 2.1E-07 4.6E-12 92.9 11.1 65 408-486 56-120 (185)
60 PRK10018 putative glycosyl tra 98.6 1.2E-06 2.7E-11 96.4 17.8 52 407-468 61-112 (279)
61 PRK10063 putative glycosyl tra 98.5 2.2E-06 4.8E-11 92.5 16.3 47 239-289 1-48 (248)
62 cd00761 Glyco_tranf_GTA_type G 98.4 4.4E-06 9.5E-11 78.2 13.4 52 421-481 62-114 (156)
63 PF10111 Glyco_tranf_2_2: Glyc 98.4 6.4E-06 1.4E-10 90.4 15.8 63 422-490 74-136 (281)
64 cd04187 DPM1_like_bac Bacteria 98.3 3.7E-06 8E-11 84.5 11.2 104 408-529 57-160 (181)
65 KOG2571 Chitin synthase/hyalur 98.3 1.3E-05 2.8E-10 98.5 16.9 48 661-710 549-596 (862)
66 PTZ00260 dolichyl-phosphate be 98.1 4.7E-05 1E-09 85.9 15.9 42 422-468 148-189 (333)
67 PRK13915 putative glucosyl-3-p 98.1 1.5E-05 3.3E-10 88.9 11.5 51 422-480 101-152 (306)
68 COG1216 Predicted glycosyltran 98.0 0.00016 3.4E-09 80.2 17.3 68 407-486 57-126 (305)
69 PRK10714 undecaprenyl phosphat 97.4 0.0011 2.3E-08 74.8 12.0 41 422-467 76-116 (325)
70 KOG2547 Ceramide glucosyltrans 97.4 0.0025 5.4E-08 72.2 13.6 159 421-709 155-314 (431)
71 cd02511 Beta4Glucosyltransfera 97.1 0.0037 8.1E-08 66.1 11.2 42 423-469 58-99 (229)
72 COG0463 WcaA Glycosyltransfera 97.0 0.0049 1.1E-07 58.6 10.2 45 238-288 2-46 (291)
73 cd02514 GT13_GLCNAC-TI GT13_GL 95.6 0.13 2.8E-06 58.7 12.6 41 242-286 3-43 (334)
74 PF02364 Glucan_synthase: 1,3- 93.1 1.5 3.2E-05 55.2 14.8 100 604-738 381-481 (817)
75 KOG2978 Dolichol-phosphate man 90.2 1.5 3.4E-05 46.3 9.0 53 407-469 64-116 (238)
76 KOG2977 Glycosyltransferase [G 76.5 34 0.00075 38.7 12.3 42 422-467 143-186 (323)
77 KOG0916 1,3-beta-glucan syntha 67.3 1.7E+02 0.0036 39.7 16.9 83 661-749 1173-1257(1679)
78 PF13712 Glyco_tranf_2_5: Glyc 66.4 18 0.00039 38.9 7.4 49 422-478 40-89 (217)
79 TIGR02460 osmo_MPGsynth mannos 57.6 46 0.001 38.6 8.8 40 420-462 140-179 (381)
80 COG4707 Uncharacterized protei 52.5 5.1 0.00011 38.0 0.3 44 343-397 20-70 (107)
81 KOG3737 Predicted polypeptide 49.3 80 0.0017 37.2 9.0 48 234-284 150-197 (603)
82 COG4858 Uncharacterized membra 48.2 1E+02 0.0022 33.0 8.8 64 863-926 96-162 (226)
83 PRK14503 mannosyl-3-phosphogly 47.5 64 0.0014 37.7 7.9 40 421-463 142-181 (393)
84 COG4818 Predicted membrane pro 44.5 2.4E+02 0.0052 27.2 9.8 26 814-839 5-30 (105)
85 KOG3736 Polypeptide N-acetylga 43.9 28 0.00061 42.9 4.7 49 235-286 138-186 (578)
86 PF13704 Glyco_tranf_2_4: Glyc 38.1 93 0.002 28.3 6.3 27 424-453 58-84 (97)
87 TIGR02921 PEP_integral PEP-CTE 37.9 8.6E+02 0.019 30.7 15.3 25 745-769 47-71 (952)
88 PRK14502 bifunctional mannosyl 37.8 1.2E+02 0.0026 38.4 8.8 40 420-462 145-184 (694)
89 PF07851 TMPIT: TMPIT-like pro 37.8 6.3E+02 0.014 29.4 13.9 19 796-814 173-191 (330)
90 PF09623 Cas_NE0113: CRISPR-as 35.4 2.8E+02 0.0061 30.4 10.2 60 243-311 4-63 (224)
91 PF03452 Anp1: Anp1; InterPro 33.0 5.6E+02 0.012 29.0 12.3 40 425-465 128-167 (269)
92 PF13896 Glyco_transf_49: Glyc 33.0 47 0.001 37.9 4.1 40 438-478 125-164 (317)
93 PF09488 Osmo_MPGsynth: Mannos 29.9 56 0.0012 38.0 4.0 58 421-484 141-203 (381)
94 KOG2442 Uncharacterized conser 25.1 4E+02 0.0088 32.5 9.8 79 865-954 311-391 (541)
95 PRK09382 ispDF bifunctional 2- 23.8 1.6E+02 0.0034 34.7 6.3 38 426-467 85-122 (378)
96 PF02709 Glyco_transf_7C: N-te 23.2 44 0.00095 30.4 1.3 48 606-683 19-66 (78)
97 PF11712 Vma12: Endoplasmic re 20.9 3.3E+02 0.0072 27.4 7.2 23 95-117 21-44 (142)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.1e-273 Score=2401.83 Aligned_cols=962 Identities=87% Similarity=1.460 Sum_probs=902.8
Q ss_pred CCccccccCCCCCccccCccCCCccCcccccCCCCcccCCCCCCCCCCCCCccccCCCCCCCcccccCCCCCCCCCCCCC
Q 002117 1 MLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPR 80 (964)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (964)
|+|++|++|++.+-.... ...+.+++...+++|++++|+...++++++|++++|+.+|.||||||+||++++.+.++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1094)
T PLN02436 129 MLSSRLNTGRHSNVSGIA--TPSELDSAPPGSQIPLLTYGEEDVEISSDRHALIVPPSTGHGNRVHPMPFPDSSASLQPR 206 (1094)
T ss_pred HhhhhcccCccccccccc--cccccccCCCcCCCcccccCcccCccCCcccccccCCcccccccccccccccccccCCCc
Confidence 789999999987611110 011222222357899999999888888888888889888889999999999999999999
Q ss_pred CCCCCCcccccCCCchhhhHhHHHHHHhhhhhhhhhcccCCCCCCCCCCCCCCCCCCcCCccCCCCCeeeeecCCCCcch
Q 002117 81 PMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISP 160 (964)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~ 160 (964)
+|||+||+++||||||+||||||+||.||+++++++++..+..+|+.++++.+++|++++|++++||+||++++++.++|
T Consensus 207 ~~~~~~~~~~~~~g~~~wkerv~~wk~kq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~p 286 (1094)
T PLN02436 207 PMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEKLQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINP 286 (1094)
T ss_pred cCCccccccccccCcHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCcccccccccCCCceEEEecCccccch
Confidence 99999999999999999999999999999855555554432223344433344688999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCCCCCc
Q 002117 161 YRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLAD 240 (964)
Q Consensus 161 ~R~~~~~~l~~~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~~~~~~lp~ 240 (964)
||++++++++++++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++||+
T Consensus 287 yR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~ 366 (1094)
T PLN02436 287 YRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAS 366 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred eeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhhh
Q 002117 241 IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYF 320 (964)
Q Consensus 241 VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~YF 320 (964)
|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+|||||||+||
T Consensus 367 vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YF 446 (1094)
T PLN02436 367 VDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYF 446 (1094)
T ss_pred eeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcccc
Q 002117 321 AQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDI 400 (964)
Q Consensus 321 s~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d~ 400 (964)
++|.|+++++.+|+|++|||+|||||||||+|||+|+++++++|+++|.|+||++|||++++|||+|||||++++|+.|.
T Consensus 447 s~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~ 526 (1094)
T PLN02436 447 SQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDV 526 (1094)
T ss_pred hccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCccc
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999998999
Q ss_pred cCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEec
Q 002117 401 EGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQF 480 (964)
Q Consensus 401 ~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~ 480 (964)
+|++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|||||
T Consensus 527 ~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQF 606 (1094)
T PLN02436 527 EGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQF 606 (1094)
T ss_pred ccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002117 481 PQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 560 (964)
Q Consensus 481 PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 560 (964)
||+|+|+|++|||+|+++||||++|+|+||+|||+|+||||+|||+||||++||...+.+...++||+.||||||+.|++
T Consensus 607 PQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (1094)
T PLN02436 607 PQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKK 686 (1094)
T ss_pred CcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999987776667888999999999998876
Q ss_pred cccccCC----ccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHH
Q 002117 561 SKKGKSN----KKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNE 636 (964)
Q Consensus 561 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~e 636 (964)
+++++++ .++.+...+++++++++++.++++++++..+++++++++||+|++|++|+++++||.+.+.+.+++++|
T Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~e 766 (1094)
T PLN02436 687 KKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLRE 766 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHH
Confidence 4432221 123345567888999999999999999999999999999999999999999999999988889999999
Q ss_pred HHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHH
Q 002117 637 AIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILL 716 (964)
Q Consensus 637 A~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~ 716 (964)
|+||+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|.+++|.|++|+++.+++.||+||++|++||++
T Consensus 767 A~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIff 846 (1094)
T PLN02436 767 AIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFL 846 (1094)
T ss_pred HHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeee
Confidence 99999999999999999999999999999999999999999999999889899999999999999999999999999999
Q ss_pred hhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 002117 717 SRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQ 796 (964)
Q Consensus 717 ~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~lLe~r 796 (964)
+++||+++|+.++|+|+||++|+++++||++++++++|+++|++||++|++++|.++++++++|+++|+++++++++|++
T Consensus 847 sr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~ 926 (1094)
T PLN02436 847 SRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQ 926 (1094)
T ss_pred ccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998877899999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred ccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCCCcccceeeccccchHHHHHHHHHHHHH
Q 002117 797 WGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIG 876 (964)
Q Consensus 797 w~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~L~iP~~~LliLnlva 876 (964)
|+|+++++||||||||+|+++++++||++++++|+|++++++|.||+|..+++.++++|+|+|+++++|+++++++|++|
T Consensus 927 wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~~a~ly~f~~S~L~iP~tti~ilNlva 1006 (1094)
T PLN02436 927 WGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLLIPPTTLLIINIIG 1006 (1094)
T ss_pred hccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccccccccccceeeecceeHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998866778999999999999999999999999
Q ss_pred HHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCCCCccc
Q 002117 877 VIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSKGDIVL 956 (964)
Q Consensus 877 iv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f~~l~v~~~~~~~~~~~~~ 956 (964)
+++|+++++++++++|+++++++|+++|+++|+|||++|||||++|+||||++||++||++|+||||+||||++++||++
T Consensus 1007 iv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr~~r~P~~v~v~s~lla~~~~l~~v~~~~~~~~~~~~~ 1086 (1094)
T PLN02436 1007 VIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVSKGGPVL 1086 (1094)
T ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHeeeccccCCCCccc
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCC
Q 002117 957 EVCGLDCN 964 (964)
Q Consensus 957 ~~~~~~~~ 964 (964)
++||++|+
T Consensus 1087 ~~~~~~~~ 1094 (1094)
T PLN02436 1087 EICGLDCD 1094 (1094)
T ss_pred cccCccCC
Confidence 99999996
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=4.1e-267 Score=2354.70 Aligned_cols=928 Identities=69% Similarity=1.240 Sum_probs=867.9
Q ss_pred cCCCCcccCCC-CCCCCC--CCCCccccCCCC---CCCcccccCCCCCCCCCCCCCCCCCCCcccccCCCchhhhHhHHH
Q 002117 31 AQEIPLLTYGN-EDVGIS--SDKHALIIPPFM---GRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEE 104 (964)
Q Consensus 31 ~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (964)
.+++|+||+|+ ++.+++ +++|+.+.|+.. |.||||||+||+|+.+|+++|+|||+||+++||||||+||||||+
T Consensus 141 ~~~~p~lt~g~~~s~ei~~~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~ 220 (1085)
T PLN02400 141 SQPIPLLTHGQPVSGEIPCATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEG 220 (1085)
T ss_pred CCCCccccCCcccCCCCCCCCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHH
Confidence 57899999998 555655 334444455543 457999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhcccC-CCCCCCCCCCCCCCCCCcCCccCCCCCeeeeecCCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 002117 105 WKKKQNEKLQVVKHQG-GNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHP 183 (964)
Q Consensus 105 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~~l~~R~~~~ 183 (964)
||+||+|++.++.+.. ...||+.++++++++|+++||+.++||+|+++++++.|++||++++++++++++||+||++|+
T Consensus 221 wk~~~~k~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~ 300 (1085)
T PLN02400 221 WKLKQDKNMMQMTNKYHEGKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHP 300 (1085)
T ss_pred HHhhhhhhccccccccccccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999987766555432 111234443345578999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHH
Q 002117 184 VNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVL 263 (964)
Q Consensus 184 ~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~~~~~~lp~VDvfV~T~dp~kEp~~v~~nTvl 263 (964)
+++++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+||||
T Consensus 301 ~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVL 380 (1085)
T PLN02400 301 VKDAYGLWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVL 380 (1085)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCChhhHHHHHHHH
Q 002117 264 SILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMK 343 (964)
Q Consensus 264 s~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~YFs~~~d~~~~~~~~~f~~e~r~mk 343 (964)
|+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||+||
T Consensus 381 SiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK 460 (1085)
T PLN02400 381 SILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMK 460 (1085)
T ss_pred HHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcccccCCCcCcEEEEeccCCCCCCCCC
Q 002117 344 REYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHK 423 (964)
Q Consensus 344 r~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~ 423 (964)
|||||||+|||+|+++++++|+++|.|+||++|||+++||||+|||||++++|+.|.+|++||+|||||||||||++||+
T Consensus 461 ~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~ 540 (1085)
T PLN02400 461 REYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHK 540 (1085)
T ss_pred HHHHHHHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcccccccchhhhhhh
Q 002117 424 KAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDI 503 (964)
Q Consensus 424 KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi 503 (964)
||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|||||||+|+|+|++|||+|++++|||+
T Consensus 541 KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi 620 (1085)
T PLN02400 541 KAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDI 620 (1085)
T ss_pred hhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCC-------ccCCcchhh
Q 002117 504 NMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSN-------KKNKDTSKQ 576 (964)
Q Consensus 504 ~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~-------~~~~~~~~~ 576 (964)
+|+|+||+|||+|+||||+|||+||||++||..+++....+ .||+||+.|+++++.+.+ .+..+++.+
T Consensus 621 ~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1085)
T PLN02400 621 NLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNI-----IVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVP 695 (1085)
T ss_pred cccccccCCCccccccCcceeeeeeccCCCccccccccccc-----cccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999986543322222 234566666543322111 123456778
Q ss_pred hhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhccccccccccccccc
Q 002117 577 IYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIG 656 (964)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevG 656 (964)
+++++++++++++++++++.++++++++++||+|++|++|++++.||.+.+.+++++++||+||+||+||++|+||+|||
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evG 775 (1085)
T PLN02400 696 IFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIG 775 (1085)
T ss_pred cccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhC
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred cccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHHhhccccccccCCCCCcchhh
Q 002117 657 WIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERF 736 (964)
Q Consensus 657 w~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl 736 (964)
|.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++|++++++||+++|+.++|+++||+
T Consensus 776 wiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL 855 (1085)
T PLN02400 776 WIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERL 855 (1085)
T ss_pred eeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHH
Confidence 99999999999999999999999999998999999999999999999999999999999999999998877899999999
Q ss_pred hHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccCcccccccccchhHHHHH
Q 002117 737 SYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGG 816 (964)
Q Consensus 737 ~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~lLe~rw~G~s~~~wWr~e~~W~I~~ 816 (964)
+|+++++||+.++++++|+++|++||++|++++|.++++++++|+++|+++++++++|++|+|+++++||||||||+|++
T Consensus 856 ~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~ 935 (1085)
T PLN02400 856 AYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGG 935 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccceeeCCCCCCC-CCcccceeeccccchHHHHHHHHHHHHHHHHHHHHHhhcCCccchhh
Q 002117 817 ASSHLFALIQGLLKVVGGVNTNFTVTSKAADD-GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPL 895 (964)
Q Consensus 817 vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~-~~~~~ly~f~ws~L~iP~~~LliLnlvaiv~gi~r~i~~~~~~w~~l 895 (964)
+|+++||++++++|+|++++++|.||+|..++ +.+.++|+|+|+++++|+++++++|++|+++|+++++++++++|+++
T Consensus 936 ~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l 1015 (1085)
T PLN02400 936 TSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPL 1015 (1085)
T ss_pred hHHHHHHHHHHHHHHhcCCcccceecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHH
Confidence 99999999999999999999999999999863 45679999999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CCc-cccccCCCC
Q 002117 896 FGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GDI-VLEVCGLDC 963 (964)
Q Consensus 896 ~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f~~l~v~~~~~~~~-~~~-~~~~~~~~~ 963 (964)
++++|+++|+++|+|||++|||||++|+|+||++||++||++|+||||+|+||+++ +|| .+++||++|
T Consensus 1016 ~~~~~~~~wvvv~l~Pf~kgL~gR~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1016 FGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence 99999999999999999999999999999999999999999999999999999999 999 999999999
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=3.9e-263 Score=2319.51 Aligned_cols=946 Identities=70% Similarity=1.243 Sum_probs=869.6
Q ss_pred CCccccccCCCCCccccCccCCCccCcccccCCCCcccCCC-CCCCCC---CCCCccccCCCCCCCcccccCCCCCCC-C
Q 002117 1 MLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGN-EDVGIS---SDKHALIIPPFMGRGKRIHPMSFPDGF-M 75 (964)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 75 (964)
|+|++|+||++.+-.. -+.|.+++++++|+||+|+ .+.+++ +++|++ +++.. .|||| ||+|+. .
T Consensus 112 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~~---~~~~~~~~ 180 (1079)
T PLN02638 112 MLSWRMNSGRGEDVGA------PNYDKEVSHNHIPLLTNGQSVSGELSAASPERLSM-ASPGA-GGKRI---PYASDVNQ 180 (1079)
T ss_pred HhhhhcccCcCccccc------ccccccCCCCCCcccccCccccCccCCCCCccccc-cCccc-cCCcc---cccccccc
Confidence 7899999999866111 1344555678999999998 555555 355555 46653 47998 888865 7
Q ss_pred CCCCCCCCCCCcccccCCCchhhhHhHHHHHHhhhhhhhhhcccC----CCCCCCCC-CCCCCCCCCcCCccCCCCCeee
Q 002117 76 TLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQG----GNGGGNND-GDGVDDPDLPMMDEGRQPLSRK 150 (964)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~pl~~~ 150 (964)
+.++|+|||+||+++||||||+||||||+||.||+|++.++.+.. +++|++.+ +++.+++|+|++|++++||+||
T Consensus 181 ~~~~~~~~~~~~~~~~g~g~~~~~~~~~~wk~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~ 260 (1079)
T PLN02638 181 SPNIRVVDPVREFGSPGLGNVAWKERVDGWKMKQDKNTIPMSTGTAPSEGRGGGDIDASTDVLMDDALLNDEARQPLSRK 260 (1079)
T ss_pred cCCcccCCccccccccccccHHHHHHHHHHHhcccccccccccccccccccCcCCCCCccccccccccccccCCCCceEE
Confidence 899999999999999999999999999999999987765544432 22223332 2233468999999999999999
Q ss_pred eecCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhh
Q 002117 151 LPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYE 230 (964)
Q Consensus 151 ~~~~~~~~~~~R~~~~~~l~~~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~ 230 (964)
++++++.+++||++++++++++++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++|++
T Consensus 261 ~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~ 340 (1079)
T PLN02638 261 VSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFALSWILDQFPKWLPVNRETYLDRLALRYD 340 (1079)
T ss_pred EecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHhccccccccccccCHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhC
Q 002117 231 KEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFK 310 (964)
Q Consensus 231 ~~~~~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~ 310 (964)
+++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+
T Consensus 341 ~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~ 420 (1079)
T PLN02638 341 REGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYN 420 (1079)
T ss_pred cCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccC
Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeE
Q 002117 311 IEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQV 390 (964)
Q Consensus 311 iepraPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv 390 (964)
|||||||+||++|.|+++++.+|+|++|||+|||||||||+|||+++++++++|+++|.|+||++|||++++|||+||||
T Consensus 421 IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqV 500 (1079)
T PLN02638 421 IEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQV 500 (1079)
T ss_pred CCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCC
Q 002117 391 FLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPT 470 (964)
Q Consensus 391 ~~~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~ 470 (964)
+++++|+.|.+|++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||++||+||||||||+
T Consensus 501 ll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~ 580 (1079)
T PLN02638 501 FLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPN 580 (1079)
T ss_pred HhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCc
Q 002117 471 SGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKW 550 (964)
Q Consensus 471 ~g~~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~ 550 (964)
.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++||...+.. .+..
T Consensus 581 ~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~------~~~~ 654 (1079)
T PLN02638 581 LGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHK------KPGF 654 (1079)
T ss_pred cCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCccccccc------cccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998754321 1111
Q ss_pred ccccccc-ccccccccCC-------ccCCcchhhhhhhhhhhhcccc--cccccccCchhhHHhhhcCCcHHHHHhhhhh
Q 002117 551 CCCCCRS-RKKSKKGKSN-------KKNKDTSKQIYALENIEEGIEG--IDNEKSSLMPQIKFEKKFGQSPVFIASTLKE 620 (964)
Q Consensus 551 ~~~c~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e 620 (964)
+++||+. +++.++.+++ .++.....+++++++++++.++ ++++++.++++.+++++||+|++|++|++++
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~ 734 (1079)
T PLN02638 655 LSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLME 734 (1079)
T ss_pred ccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHh
Confidence 2235554 3332221111 1223345577788888887765 5567888999999999999999999999999
Q ss_pred hCCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHH
Q 002117 621 AGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDR 700 (964)
Q Consensus 621 ~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~ 700 (964)
.+|.+.+.+++++++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|.+++|.|+||+|+.++
T Consensus 735 ~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~ 814 (1079)
T PLN02638 735 NGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDR 814 (1079)
T ss_pred hcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHH
Confidence 99999888999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHHHHHhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHH
Q 002117 701 LHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILF 780 (964)
Q Consensus 701 l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~f 780 (964)
+.||+||++|++|++++++||+++|+.++|+++||++|+++++||++++++++|+++|++||++|++++|.++++++++|
T Consensus 815 L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f 894 (1079)
T PLN02638 815 LNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWF 894 (1079)
T ss_pred HHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHH
Confidence 99999999999999999999999887789999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHhhccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCC-CCcccceeecc
Q 002117 781 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADD-GEFSDLYLFKW 859 (964)
Q Consensus 781 i~lfls~~~~~lLe~rw~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~-~~~~~ly~f~w 859 (964)
+++|+++++++++|++|+|+++++||||||||+|+++++|+||++++++|+|++++++|.||+|..++ ++++++|+|+|
T Consensus 895 ~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~~~ely~f~w 974 (1079)
T PLN02638 895 ISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKW 974 (1079)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccccccccccceeEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999873 45789999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHH
Q 002117 860 TSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFS 939 (964)
Q Consensus 860 s~L~iP~~~LliLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f~ 939 (964)
|++++|+++++++|++|+++|+++++++++++|+++++++|+++|+++|+|||++|||||++|+||||++||++|+++|+
T Consensus 975 S~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~~r~P~~v~v~s~ll~~~~~ 1054 (1079)
T PLN02638 975 TTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFS 1054 (1079)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHH
Confidence 99999999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred hhheeecCCCCC-CCccccccCCCC
Q 002117 940 LLWARVNPFVSK-GDIVLEVCGLDC 963 (964)
Q Consensus 940 ~l~v~~~~~~~~-~~~~~~~~~~~~ 963 (964)
||||+|+||+++ +||.+++||++|
T Consensus 1055 l~~v~~~~~~~~~~~~~~~~~~~~~ 1079 (1079)
T PLN02638 1055 LLWVRIDPFTTRVTGPDVEQCGINC 1079 (1079)
T ss_pred HHHheecccccCCCCchhhccCcCC
Confidence 999999999999 999999999999
No 4
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=3.4e-258 Score=2272.12 Aligned_cols=875 Identities=71% Similarity=1.329 Sum_probs=829.9
Q ss_pred CCCCCCCCcccccCCCchhhhHhHHHHHHhhhhhhhhhcccCCCCCCCCCCCCCCCCCCcCCccCCCCCeeeeecCCCCc
Q 002117 79 PRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKI 158 (964)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~ 158 (964)
-++|||+|| |||||+||||||+||.||+ ++++++++.++ .++ +.+++|+|+|++.++||+||+|++++.+
T Consensus 137 ~~~~~~~~~----~~g~~~wk~r~~~wk~~~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~pL~~~~~i~~~~~ 206 (1044)
T PLN02915 137 GKDLEAERE----GYGNAEWKDRVDKWKTRQE-KRGLVNKDDSD----DGD-DKGDEEEYLLAEARQPLWRKVPIPSSKI 206 (1044)
T ss_pred CCCcCcccc----CcCCHHHHHHHHHHHhhhh-hhccccccccC----CCC-CCCCcccccccccCCCceEEEecCcccc
Confidence 457999999 9999999999999999996 44444443221 111 2236899999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCCCC
Q 002117 159 SPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDL 238 (964)
Q Consensus 159 ~~~R~~~~~~l~~~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~~~~~~l 238 (964)
+|||++++++++++++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++|
T Consensus 207 ~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~e~~~~~~~L 286 (1044)
T PLN02915 207 NPYRIVIVLRLVILCFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEPNRL 286 (1044)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHHHHHHHHHHHHHHHHHHccCccccccccccCHHHHHHHhccCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+|||||||+
T Consensus 287 P~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~ 366 (1044)
T PLN02915 287 APVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAPEF 366 (1044)
T ss_pred CceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
||++|.|+++++.+|+|++|||+|||||||||+|||+|+++++++|+++|.|+||++|||+++||||+|||||++++|+.
T Consensus 367 YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~ 446 (1044)
T PLN02915 367 YFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGAL 446 (1044)
T ss_pred HhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 478 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V 478 (964)
|.+|++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|||
T Consensus 447 d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afV 526 (1044)
T PLN02915 447 DVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYV 526 (1044)
T ss_pred ccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccc
Q 002117 479 QFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSR 558 (964)
Q Consensus 479 Q~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~ 558 (964)
||||+|+|+|++|||+|+++||||++|+|+||+|||+|+||||+|||+||||++||..++.+..+++||+.||||||+.+
T Consensus 527 QFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1044)
T PLN02915 527 QFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGG 606 (1044)
T ss_pred eCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999887778889999999999999877
Q ss_pred cccccccCC-----------------------------ccCCcchhhhhhhhhhhhccccccc-ccccCchhhHHhhhcC
Q 002117 559 KKSKKGKSN-----------------------------KKNKDTSKQIYALENIEEGIEGIDN-EKSSLMPQIKFEKKFG 608 (964)
Q Consensus 559 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~fG 608 (964)
+++++..++ ....+++.+++++++|+++++++++ ++++++++++++++||
T Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG 686 (1044)
T PLN02915 607 RRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFG 686 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcC
Confidence 664332110 0112345678899999999999876 8888999999999999
Q ss_pred CcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCc
Q 002117 609 QSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 688 (964)
Q Consensus 609 ~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aa 688 (964)
+|++|++|++++.+|.+.+.+++++++||+||+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|++++
T Consensus 687 ~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~A 766 (1044)
T PLN02915 687 QSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPA 766 (1044)
T ss_pred CcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHH
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999988899
Q ss_pred ccccCCCCHHHHHHHHHHhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcc
Q 002117 689 FKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFI 768 (964)
Q Consensus 689 f~G~aP~sl~~~l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~i 768 (964)
|.|++|+++.++++||+||++|++|++++++||+++++.++|+++||++|+++++||+.++++++|+++|++||++|+++
T Consensus 767 F~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~~i 846 (1044)
T PLN02915 767 FKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFI 846 (1044)
T ss_pred hcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999877789999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCC
Q 002117 769 VPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADD 848 (964)
Q Consensus 769 ip~~s~~~~~~fi~lfls~~~~~lLe~rw~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~ 848 (964)
+|.++....++|+++|+++++++++|++|+|+++++||||||||+|+++++|+||++++++|+|++++++|+||+|+.++
T Consensus 847 ~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~ 926 (1044)
T PLN02915 847 IPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADD 926 (1044)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCcccc
Confidence 99888777788899999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred C--CcccceeeccccchHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchh
Q 002117 849 G--EFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTI 926 (964)
Q Consensus 849 ~--~~~~ly~f~ws~L~iP~~~LliLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~ 926 (964)
+ +++++|+|+||++++|+++++++|++|+++|++++++++++.|+++++++|+++|+++|+|||++|||||++|+|||
T Consensus 927 ~~d~~~ely~F~~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~~r~P~~ 1006 (1044)
T PLN02915 927 EADEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTI 1006 (1044)
T ss_pred chhhhccceeecceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Confidence 3 45789999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhheeecCCCCC-CCccccccCCCC
Q 002117 927 LLVWAILLASIFSLLWARVNPFVSK-GDIVLEVCGLDC 963 (964)
Q Consensus 927 v~~~s~~la~~f~~l~v~~~~~~~~-~~~~~~~~~~~~ 963 (964)
|++||++||++|++|||+|+||+++ +||.+++||++|
T Consensus 1007 v~v~s~lla~~~~ll~v~~~~~~~~~~~~~~~~~~~~~ 1044 (1044)
T PLN02915 1007 VVLWSILLASIFSLVWVRIDPFLPKQTGPILKQCGVEC 1044 (1044)
T ss_pred ehHHHHHHHHHHHHHHheeccccCCCCCccccccCCCC
Confidence 9999999999999999999999999 999999999999
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.3e-251 Score=2214.95 Aligned_cols=904 Identities=68% Similarity=1.239 Sum_probs=834.5
Q ss_pred CCccccccCCCCCccccCccCCCccCcccccCCCCcccCCC---CCCCCCC-----CCCccccCCCCCCCcccccCCCCC
Q 002117 1 MLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGN---EDVGISS-----DKHALIIPPFMGRGKRIHPMSFPD 72 (964)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 72 (964)
|+|++|++|++.+ . + .+++++|++++|+ ...++++ ++|++ +|+. .||||||+||++
T Consensus 127 ~~~~~~~~~~~~~---~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~ 190 (1040)
T PLN02189 127 MLHGKMSYGRGPD---D------D----ENNQFPPVITGVRSRPVSGEFPIGSGYGHGEQM-LSSS--LHKRVHPYPVSE 190 (1040)
T ss_pred HhhhhcccCCCcc---c------C----CCcCCCcccccCccccccCCcCccccccccccc-cCCc--ccCccCcccccC
Confidence 6889999988765 1 1 1346899999997 5566654 44555 4664 589999999988
Q ss_pred CCCCCCCCCCCCCCcccccCCCchhhhHhHHHHHHhhhhhhhhhcccCCCCCCCCCCCCCCCCCCcCCccCCCCCeeeee
Q 002117 73 GFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLP 152 (964)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~ 152 (964)
.++|+|||+||++ ||||||+||.||+ +.. ++. +.+++|++++|++++||+||++
T Consensus 191 ----~~~~~~~~~~~~~--------wk~rv~~wk~~~~---------~~~--~~~---~~~~~d~~~~~~~~~pL~~~~~ 244 (1040)
T PLN02189 191 ----PGSAKWDEKKEGG--------WKERMDDWKMQQG---------NLG--PDP---DDYDADMALIDEARQPLSRKVP 244 (1040)
T ss_pred ----CCcccCCcccccc--------HHHHHHHHHhhcc---------cCC--CCC---CCCchhhhhcccCCCCceEEEe
Confidence 4568999999975 9999999999995 110 111 2346788889999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcC
Q 002117 153 ISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKE 232 (964)
Q Consensus 153 ~~~~~~~~~R~~~~~~l~~~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~ 232 (964)
++++.++|||++++++++++++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++|++++
T Consensus 245 ~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R~t~~drL~~r~~~~ 324 (1040)
T PLN02189 245 IASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDRETYLDRLSLRYERE 324 (1040)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHHHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccC
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCC
Q 002117 233 GKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIE 312 (964)
Q Consensus 233 ~~~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~ie 312 (964)
+++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+||
T Consensus 325 ~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~Ie 404 (1040)
T PLN02189 325 GEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIE 404 (1040)
T ss_pred CCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEee
Q 002117 313 PRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFL 392 (964)
Q Consensus 313 praPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~ 392 (964)
|||||+||++|.|+++++.+|+|++|||+||+||||||+|||+++++++++|+++|.|+||++|||++++|||+||||++
T Consensus 405 pRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll 484 (1040)
T PLN02189 405 PRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFL 484 (1040)
T ss_pred cCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCC
Q 002117 393 GQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSG 472 (964)
Q Consensus 393 ~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g 472 (964)
+++|+.|.+|++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||++||+||||||||+.|
T Consensus 485 ~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g 564 (1040)
T PLN02189 485 GHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIG 564 (1040)
T ss_pred cCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccc
Q 002117 473 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCC 552 (964)
Q Consensus 473 ~~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~ 552 (964)
+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++|++..+.+..++ ++|
T Consensus 565 ~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~-----~~~ 639 (1040)
T PLN02189 565 RKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVT-----CDC 639 (1040)
T ss_pred ceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccccccccccc-----cch
Confidence 999999999999999999999999999999999999999999999999999999999999886544333322 123
Q ss_pred cccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhh
Q 002117 553 CCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTAS 632 (964)
Q Consensus 553 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~ 632 (964)
+||..++++++ .+..... ..++.++++++++.++++++++++||+|.+|++|++.+.+|.+...+.++
T Consensus 640 ~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ 707 (1040)
T PLN02189 640 CPCFGRRKKKH-AKNGLNG-----------EVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAA 707 (1040)
T ss_pred hhhcccccccc-ccccccc-----------ccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHH
Confidence 34443332111 1111000 01223345556667788999999999999999999999999988888899
Q ss_pred HHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchh
Q 002117 633 LLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSV 712 (964)
Q Consensus 633 ~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~l 712 (964)
+++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++
T Consensus 708 ~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~l 787 (1040)
T PLN02189 708 LLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSV 787 (1040)
T ss_pred HHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHhhccccccccC-CCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHH
Q 002117 713 EILLSRHCPIWYGYG-CGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATG 791 (964)
Q Consensus 713 Qil~~k~~Pl~~g~~-~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~ 791 (964)
||+++++||+++|+. ++|+++||++|+++++||+.++++++|+++|++||++|++++|.++++++++|+++|+++++++
T Consensus 788 qI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~ 867 (1040)
T PLN02189 788 EIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATG 867 (1040)
T ss_pred HHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHH
Confidence 999999999998763 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCCCcccceeeccccchHHHHHHHH
Q 002117 792 ILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPLTLLV 871 (964)
Q Consensus 792 lLe~rw~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~L~iP~~~Lli 871 (964)
++|++|+|+++++||||||||+|+++++++||++++++|+|++++++|.||+|..++++++++|+|+||++++|++++++
T Consensus 868 llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~~~ly~f~~s~l~iP~ttl~i 947 (1040)
T PLN02189 868 ILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEFGELYAFKWTTLLIPPTTLLI 947 (1040)
T ss_pred HHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccccccccceeecceeHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998878889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC
Q 002117 872 FNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK 951 (964)
Q Consensus 872 Lnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f~~l~v~~~~~~~~ 951 (964)
+|++|+++|+++++++++++|+++++++|+++|+++|+|||++|||||++|+||||++||++|+++|+||||+|+||+++
T Consensus 948 ~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v~s~ll~~~~~l~~v~~~~~~~~ 1027 (1040)
T PLN02189 948 INIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLK 1027 (1040)
T ss_pred HHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHheecccccC
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCccccccCCCC
Q 002117 952 -GDIVLEVCGLDC 963 (964)
Q Consensus 952 -~~~~~~~~~~~~ 963 (964)
+||.+++||++|
T Consensus 1028 ~~~~~~~~~~~~~ 1040 (1040)
T PLN02189 1028 TKGPDVKQCGINC 1040 (1040)
T ss_pred CCCchhhccCcCC
Confidence 999999999999
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=7.8e-247 Score=2164.93 Aligned_cols=862 Identities=69% Similarity=1.278 Sum_probs=803.0
Q ss_pred CCCchhhhHhHHHHHHhhhhhhhhhcccCCCCCCCCCCCCCCCCCCcCCccCCCCCeeeeecCCCCcchhHHHHHHHHHH
Q 002117 92 GYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVI 171 (964)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~ 171 (964)
+|||++||||||+||.||+|++.++.+..... ++.++ +..++|+|+ ||.++||+||++++++.++|||+++++++++
T Consensus 108 ~~~~~~wk~r~~~wk~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~-~~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~ 184 (977)
T PLN02195 108 EYGNPIWKNRVESWKDKKNKKKKSAKKKEAHK-AQIPP-EQQMEEKPS-ADAYEPLSRVIPIPRNKLTPYRAVIIMRLII 184 (977)
T ss_pred ccCCHHHHHHHHHHHHhhhhhccccccccccc-cCCCC-ccCCccccc-ccccCCceEEEecCcccchhHHHHHHHHHHH
Confidence 39999999999999999987766555443211 23322 334678886 9999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCCCCCceeEEEecCCCC
Q 002117 172 LGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPM 251 (964)
Q Consensus 172 ~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~~~~~~lp~VDvfV~T~dp~ 251 (964)
+++||+||++|++++++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++|+++++++++||+|||||||+||.
T Consensus 185 l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~ 264 (977)
T PLN02195 185 LGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRETYIDRLSARYEREGEPSQLAAVDFFVSTVDPL 264 (977)
T ss_pred HHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHhcccccccccceECHHHHHHHhccCCCcccCCceeeEeccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred CCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCC
Q 002117 252 KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKV 331 (964)
Q Consensus 252 kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~YFs~~~d~~~~~~ 331 (964)
||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+|||||||+||++|.|+++++.
T Consensus 265 kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~ 344 (977)
T PLN02195 265 KEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKV 344 (977)
T ss_pred cCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcccccCCCcCcEEEE
Q 002117 332 NPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYV 411 (964)
Q Consensus 332 ~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d~~g~~lP~lvYv 411 (964)
+|+|++|||+|||||||||+|||+|+++++++|+++|.|+||++|||+++||||+|||||++++|+.|.+|++||+||||
T Consensus 345 ~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYV 424 (977)
T PLN02195 345 QPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEGNELPRLVYV 424 (977)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCcccccccCceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCccc
Q 002117 412 SREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHD 491 (964)
Q Consensus 412 sRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d 491 (964)
|||||||++||+||||||+++||||++||||||||||||||+|||++||+|||||+||+.|+++|||||||+|+|++++|
T Consensus 425 SREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D 504 (977)
T PLN02195 425 SREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSD 504 (977)
T ss_pred eccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccccccc----CC
Q 002117 492 RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGK----SN 567 (964)
Q Consensus 492 ~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~----~~ 567 (964)
+|+|++++|||++|+|+||+|||+||||||+|||+||||++|+..++.+...+.+| || ||+.+++..+.. ++
T Consensus 505 ~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~ 580 (977)
T PLN02195 505 RYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSS---SC-CCPTKKKPEQDPSEIYRD 580 (977)
T ss_pred CCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccccccccccccccc---cc-cccccccccccchhhccc
Confidence 99999999999999999999999999999999999999999887655444444444 44 455433322111 11
Q ss_pred ccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhcccccc
Q 002117 568 KKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYED 647 (964)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~ 647 (964)
.++.+.+..+++++++++ ..+.+++.++++++++++||+|++|++|++.+.+|.+...+.+++++||++|+||+||+
T Consensus 581 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 657 (977)
T PLN02195 581 AKREDLNAAIFNLREIDN---YDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEE 657 (977)
T ss_pred cccccccccccccccccc---cchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCcc
Confidence 123333444555554443 12346777889999999999999999999999999998888899999999999999999
Q ss_pred ccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHHhhccccccccC
Q 002117 648 KTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYG 727 (964)
Q Consensus 648 ~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~~k~~Pl~~g~~ 727 (964)
+|+||+||||.|+|+|||+.||++||++||||+||+|.+++|.|++|+|+.+++.||+||++|++|++++++||+++|+.
T Consensus 658 ~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~ 737 (977)
T PLN02195 658 KTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYG 737 (977)
T ss_pred ccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccC
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999998764
Q ss_pred -CCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccc
Q 002117 728 -CGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWW 806 (964)
Q Consensus 728 -~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~lLe~rw~G~s~~~wW 806 (964)
++|+++||++|+++++||++++++++|+++|++||++|++++|.+++.++++|+++|+++++++++|++|+|+++++||
T Consensus 738 ~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WW 817 (977)
T PLN02195 738 GGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLW 817 (977)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHh
Confidence 7899999999999999999999999999999999999999999998888889999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCCCcccceeeccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 002117 807 RNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAIS 886 (964)
Q Consensus 807 r~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~L~iP~~~LliLnlvaiv~gi~r~i~ 886 (964)
||||||+|+++++|+||++++++|+|++++++|.||+|..++++++++|+|+||++++|+++++++|++|+++|++++++
T Consensus 818 rnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~~~~~Y~f~~S~l~iP~ttl~ilNlvaiv~g~~~~i~ 897 (977)
T PLN02195 818 RNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTEFGELYMVKWTTLLIPPTSLLIINLVGVVAGFSDALN 897 (977)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccchhcceeccceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998778899999999999999999999999999999999998
Q ss_pred cCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CCcc-cccc-CCCC
Q 002117 887 NGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GDIV-LEVC-GLDC 963 (964)
Q Consensus 887 ~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f~~l~v~~~~~~~~-~~~~-~~~~-~~~~ 963 (964)
+++++|+++++++|+++|+++|+|||++|||||++|+|+||++||++|+++|+||||+||||+++ +||. +++| |++|
T Consensus 898 ~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v~s~ll~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~ 977 (977)
T PLN02195 898 KGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVGKTDTTTLSNNCISIDC 977 (977)
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHeeccccccCCCCCchhhccCCCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999 9999 9999 9999
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=3.4e-221 Score=1955.61 Aligned_cols=784 Identities=55% Similarity=1.019 Sum_probs=707.6
Q ss_pred CCccCCCCCeeeeecCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhccccccccc
Q 002117 139 MMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVR 218 (964)
Q Consensus 139 ~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r 218 (964)
+||+.++||+||++++++.++|||++++++++++++||+||++|++.++.|+|+++++||+||+|+|+|+|++||+||+|
T Consensus 262 ~~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R 341 (1135)
T PLN02248 262 FMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINR 341 (1135)
T ss_pred ccccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 58999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred chhhhhhhhhhhcCCC-----CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhh
Q 002117 219 ETYLDRLSLRYEKEGK-----PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS 293 (964)
Q Consensus 219 ~t~~drL~~r~~~~~~-----~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~ 293 (964)
.||+|||++|+|.|++ +++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.
T Consensus 342 ~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~ 421 (1135)
T PLN02248 342 ATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMA 421 (1135)
T ss_pred ccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHH
Confidence 9999999999986543 57899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHh--------------
Q 002117 294 ETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAM-------------- 359 (964)
Q Consensus 294 Ea~~FA~~WvPFCkk~~iepraPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~-------------- 359 (964)
|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||.|||||||||+|||+|++.
T Consensus 422 EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~ 501 (1135)
T PLN02248 422 EAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEI 501 (1135)
T ss_pred HHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999641
Q ss_pred ----------------hccCCCCCcccCCCCCCCCC--------CcCCCccceeEeecCCC------------ccccc--
Q 002117 360 ----------------AQKVPEDGWTMQDGTPWPGN--------NVRDHPGMIQVFLGQNG------------VRDIE-- 401 (964)
Q Consensus 360 ----------------~~~vp~~~w~m~dg~~w~~~--------~~rdhp~iiqv~~~~~g------------~~d~~-- 401 (964)
.+++|+++| |+|||+|||+ .++|||+||||++++++ ..|.+
T Consensus 502 ~~~~~~~~~~~~~~~e~~~~~~~~w-m~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~ 580 (1135)
T PLN02248 502 KAKKKQRESGGGDPSEPLKVPKATW-MADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDV 580 (1135)
T ss_pred Hhhhhhhhhccccccccccccccee-eccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccc
Confidence 245788899 9999999997 45799999999998644 12333
Q ss_pred CCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecC
Q 002117 402 GNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFP 481 (964)
Q Consensus 402 g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~P 481 (964)
+++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||++||+||||||||+ |+++||||||
T Consensus 581 d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFP 659 (1135)
T PLN02248 581 DIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFP 659 (1135)
T ss_pred ccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCC
Confidence 348999999999999999999999999999999999999999999999999999999999999999997 9999999999
Q ss_pred eeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccc
Q 002117 482 QRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKS 561 (964)
Q Consensus 482 Q~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 561 (964)
|+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++||+.++. +.+|++||+.++++
T Consensus 660 QrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~--------~~~~~~~~~~~~~~ 731 (1135)
T PLN02248 660 QRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEH--------SGCFGSCKFTKKKK 731 (1135)
T ss_pred cccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccc--------cccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999865322 12244455543322
Q ss_pred ccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhh---------CCCCC------
Q 002117 562 KKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEA---------GGVPT------ 626 (964)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~---------GG~~~------ 626 (964)
++.+.. . ... +++++ .+++ ++.+.++++||+|..|++|+..+. ++.+.
T Consensus 732 ~~~~~~--~---~~~---~~~~~-----~~~~----~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~ 794 (1135)
T PLN02248 732 KETSAS--E---PEE---QPDLE-----DDDD----LELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGA 794 (1135)
T ss_pred cccccc--c---ccc---ccccc-----ccch----hhhhhhhhhhccchhhhhhhHHHhhccccccccccccccccccc
Confidence 110000 0 000 11111 0111 345678899999999999986432 22211
Q ss_pred -----CCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHH
Q 002117 627 -----GASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRL 701 (964)
Q Consensus 627 -----~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l 701 (964)
....+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|++.+|.|++|+|+.+++
T Consensus 795 ~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L 874 (1135)
T PLN02248 795 LTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRL 874 (1135)
T ss_pred ccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHH
Confidence 123467999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHH
Q 002117 702 HQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFM 781 (964)
Q Consensus 702 ~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi 781 (964)
+||+||++|++||++++++|+++ .++|++.||++|+++++||++++++++|+++|++||++|++++|+.+..++++++
T Consensus 875 ~Qr~RWA~G~lQIf~sr~~Pll~--~~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yll 952 (1135)
T PLN02248 875 HQVLRWATGSVEIFFSRNNALLA--SRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLL 952 (1135)
T ss_pred HHHHHHhhchHHHHhccCCcccc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHH
Confidence 99999999999999999999985 4789999999999999999999999999999999999999999987655555555
Q ss_pred HHHHHHHHHHHHHhhccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCC---Ccccceeec
Q 002117 782 ALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDG---EFSDLYLFK 858 (964)
Q Consensus 782 ~lfls~~~~~lLe~rw~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~---~~~~ly~f~ 858 (964)
.+++++++++++|++|+|+++++|||+||||+|++++++++|++++++|+|++++++|.||+|+.+++ +++++|+|+
T Consensus 953 ~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~a~ly~f~ 1032 (1135)
T PLN02248 953 IITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYIVK 1032 (1135)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccccccccchheecC
Confidence 66788899999999999999999999999999999999999999999999999999999999988633 467899999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 002117 859 WTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIF 938 (964)
Q Consensus 859 ws~L~iP~~~LliLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f 938 (964)
|+++++|+++++++|++|+++|+++++.++++.|+.+++++|+++|+++|+|||++|||||++|+|+||++||++|++++
T Consensus 1033 wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P~iv~v~s~ll~~~~ 1112 (1135)
T PLN02248 1033 WTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSITI 1112 (1135)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeehHHHHHHHHHHH
Confidence 99999999999999999999999999987777899999999999999999999999999999999999999999999999
Q ss_pred HhhheeecCCCCC
Q 002117 939 SLLWARVNPFVSK 951 (964)
Q Consensus 939 ~~l~v~~~~~~~~ 951 (964)
+||||+|+||...
T Consensus 1113 sll~v~~~~~~~~ 1125 (1135)
T PLN02248 1113 SLLWVAISPPSGA 1125 (1135)
T ss_pred HHHheEeccccCc
Confidence 9999999999854
No 8
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=9.4e-216 Score=1864.14 Aligned_cols=713 Identities=68% Similarity=1.251 Sum_probs=683.6
Q ss_pred eeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhhh
Q 002117 241 IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYF 320 (964)
Q Consensus 241 VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~YF 320 (964)
|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|++|||||.||++|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcccc
Q 002117 321 AQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDI 400 (964)
Q Consensus 321 s~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d~ 400 (964)
+++.|+++++.+|+|++||++|||+|||||+|||+++++.+++|+++|+|+||++|||++++|||+||||+++++++.|.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~ 160 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDV 160 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEec
Q 002117 401 EGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQF 480 (964)
Q Consensus 401 ~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~ 480 (964)
+|++||+||||||||||+++||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|||||
T Consensus 161 ~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQf 240 (720)
T PF03552_consen 161 DGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQF 240 (720)
T ss_pred ccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002117 481 PQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 560 (964)
Q Consensus 481 PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 560 (964)
||+|+|+|++|+|+|++++||+++|+|+||+|||+||||||+|||+||||++|+...+..+.+| .+|+||++.+++
T Consensus 241 pq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~----~~~~~c~~~~k~ 316 (720)
T PF03552_consen 241 PQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTC----CCCSCCFGRRKK 316 (720)
T ss_pred CceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcce----eeeecccCCccc
Confidence 9999999999999999999999999999999999999999999999999999998777655544 234445554443
Q ss_pred cccccCC----ccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHH
Q 002117 561 SKKGKSN----KKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNE 636 (964)
Q Consensus 561 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~e 636 (964)
+++++++ .++.+++.+++++++++|+.++.+++++..+++++++++||+|++|++|+..+.|+.+.+.+++++|+|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~E 396 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEE 396 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHH
Confidence 3322222 245677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHH
Q 002117 637 AIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILL 716 (964)
Q Consensus 637 A~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~ 716 (964)
|+||+||+||++|+|||||||.|+++|||+.||++||++||||+||+|+++||.|.||+++.+.+.|++||+.|++||++
T Consensus 397 A~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~f 476 (720)
T PF03552_consen 397 AIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFF 476 (720)
T ss_pred HHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 002117 717 SRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQ 796 (964)
Q Consensus 717 ~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~lLe~r 796 (964)
+|+||+|+|+.++|+++||++|++.++|+++++|.++|+++|++||++|++++|++++.++++|+++|+++++++++|++
T Consensus 477 Sr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~ 556 (720)
T PF03552_consen 477 SRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFR 556 (720)
T ss_pred hcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999877899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCC--CCCcccceeeccccchHHHHHHHHHHH
Q 002117 797 WGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAAD--DGEFSDLYLFKWTSLLIPPLTLLVFNL 874 (964)
Q Consensus 797 w~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~--~~~~~~ly~f~ws~L~iP~~~LliLnl 874 (964)
|+|+++++||||||||+|.++++|+||++++++|+|++++++|.||+|..+ ++++.++|+|+|+++++|+++|+++|+
T Consensus 557 wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~ely~f~wS~LfiP~tTllilNL 636 (720)
T PF03552_consen 557 WSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYAELYIFKWSPLFIPPTTLLILNL 636 (720)
T ss_pred hccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccccccccccccccchhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987 455678999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CC
Q 002117 875 IGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GD 953 (964)
Q Consensus 875 vaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f~~l~v~~~~~~~~-~~ 953 (964)
+|+++|+++++++++++|+++++++|+++|+++|+|||++|||||++|+||||++||++||++|++|||+||||+++ +|
T Consensus 637 va~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~r~P~~v~v~S~lla~i~~llwv~i~~~~~~~~~ 716 (720)
T PF03552_consen 637 VAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKDRIPTSVIVWSVLLASIFSLLWVRIDPFLAKTTG 716 (720)
T ss_pred HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccCCcceeehHHHHHHHHHHHHHheecccCcCCCCC
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cccc
Q 002117 954 IVLE 957 (964)
Q Consensus 954 ~~~~ 957 (964)
|+++
T Consensus 717 ~~~~ 720 (720)
T PF03552_consen 717 PDLK 720 (720)
T ss_pred CCCC
Confidence 9875
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=5.6e-199 Score=1726.39 Aligned_cols=725 Identities=34% Similarity=0.609 Sum_probs=657.0
Q ss_pred CCCCCeeeeecCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccccchhh
Q 002117 143 GRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYL 222 (964)
Q Consensus 143 ~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~~l~~R~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~ 222 (964)
+.+||++++++++.. ||++.++++++++.|++||++++++++ ++|+++++||+||+|+|+|+|++||+|++|.|+|
T Consensus 7 ~~~pL~~~~~~~~~~---~r~~~~~vl~~~~~~l~~R~~~~~~~~-~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~~p 82 (756)
T PLN02190 7 SLPPLCERISHKSYF---LRAVDLTILGLLFSLLLYRILHMSEND-TVWLVAFLCESCFSFVWLLITCIKWSPAEYKPYP 82 (756)
T ss_pred CCCCceeeeeccchh---HHHHHHHHHHHHHHHHHHHHhCCCccc-HHHHHHHHHHHHHHHHHHHhccceeeecCCCCCc
Confidence 456999999999884 899999999999999999999999887 6899999999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhh
Q 002117 223 DRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKW 302 (964)
Q Consensus 223 drL~~r~~~~~~~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~W 302 (964)
|||++|++ +||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|++|||||.|||+|||+|
T Consensus 83 ~~l~~r~~------~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~W 156 (756)
T PLN02190 83 DRLDERVH------DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIW 156 (756)
T ss_pred HHHHHhhc------cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhh
Confidence 99999983 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhCCCCCCchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCC--CCCCCCC
Q 002117 303 VPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDG--TPWPGNN 380 (964)
Q Consensus 303 vPFCkk~~iepraPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg--~~w~~~~ 380 (964)
|||||||||||||||+||+++.+ ++.+++|++||++||+||||||+||++++ +...|.+.|+ .+|++++
T Consensus 157 vPFCrK~~IepRaPe~YF~~~~~---~~~~~~f~~e~~~~K~eYee~k~ri~~a~------~~~~~~~~~~~~~~~~~~~ 227 (756)
T PLN02190 157 VPFCKKYNVRVRAPFRYFLNPPV---ATEDSEFSKDWEMTKREYEKLSRKVEDAT------GDSHWLDAEDDFEAFSNTK 227 (756)
T ss_pred cccccccCCCcCCHHHHhcCCCC---CCCCchhHHHHHHHHHHHHHHHHHHHhhc------cCCCCcccCCcccccCCCC
Confidence 99999999999999999998643 33457999999999999999999999864 3466777666 6899999
Q ss_pred cCCCccceeEeecCCCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHH
Q 002117 381 VRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALR 460 (964)
Q Consensus 381 ~rdhp~iiqv~~~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr 460 (964)
++|||+||||+++++|+ +.+|++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||+++|
T Consensus 228 ~~dH~~iiqVll~~~~~-~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r 306 (756)
T PLN02190 228 PNDHSTIVKVVWENKGG-VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVR 306 (756)
T ss_pred CCCCccceEEEecCCCC-ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHH
Confidence 99999999999999775 45789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCC-cceEEEecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCC
Q 002117 461 EAMCFMMDPTSG-KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKP 539 (964)
Q Consensus 461 ~amcff~Dp~~g-~~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~ 539 (964)
+||||||||+.+ +++|||||||+|+ |+|+|++++|||++|+|+||+|||+|+||||+|||+||||++||..++.
T Consensus 307 ~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~ 381 (756)
T PLN02190 307 QAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDD 381 (756)
T ss_pred HhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccc
Confidence 999999999744 5899999999998 7899999999999999999999999999999999999999988753321
Q ss_pred CCCcCCCCCCccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhh
Q 002117 540 PRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLK 619 (964)
Q Consensus 540 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~ 619 (964)
... .. ..+++ ..++.+++++||+|++|++|+..
T Consensus 382 ~~~------------~~----------------------------------~~~~~-~~~~~~~~~~fg~s~~f~~s~~~ 414 (756)
T PLN02190 382 GSL------------SS----------------------------------VATRE-FLAEDSLAREFGNSKEMVKSVVD 414 (756)
T ss_pred ccc------------cc----------------------------------ccccc-ccchhhhhhhcCCcHHHHHHHHH
Confidence 000 00 00111 34566778999999999999987
Q ss_pred hhCCCCC-CCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHH
Q 002117 620 EAGGVPT-GASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLS 698 (964)
Q Consensus 620 e~GG~~~-~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~ 698 (964)
+.-+-+. ..+.+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|++++|.|.+|+++.
T Consensus 415 ~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~ 494 (756)
T PLN02190 415 ALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGP 494 (756)
T ss_pred HhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChH
Confidence 6533222 334578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHH
Q 002117 699 DRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASI 778 (964)
Q Consensus 699 ~~l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~ 778 (964)
+.+.||+||++|++|++++++||+++++.++|++.||++|++.++ |++++|+++|+++|++||++|++++|.. .++.
T Consensus 495 ~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~ 571 (756)
T PLN02190 495 EAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--VYLG 571 (756)
T ss_pred HHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--cHHH
Confidence 999999999999999999999999976668999999999999988 9999999999999999999999999965 3567
Q ss_pred HHHHHHHHHHHHHHHHhhccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCC-----------
Q 002117 779 LFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAAD----------- 847 (964)
Q Consensus 779 ~fi~lfls~~~~~lLe~rw~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~----------- 847 (964)
+++++++.+++++++|++|+|+++++||||||||+|+++++|+||++++++|+|++++++|+||+|..+
T Consensus 572 ~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~ 651 (756)
T PLN02190 572 IIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPS 651 (756)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccc
Confidence 778888899999999999999999999999999999999999999999999999999999999999643
Q ss_pred --C--CC--cccceeeccccchHHHHHHHHHHHHHHHHHHHHHhh---cCCccchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 002117 848 --D--GE--FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAIS---NGYETWGPLFGKLFFSLWVILHLYPFLKGFLG 918 (964)
Q Consensus 848 --~--~~--~~~ly~f~ws~L~iP~~~LliLnlvaiv~gi~r~i~---~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~g 918 (964)
+ ++ .+++|+|+||++++|.++++++|++|++.|+++++. ++.+.|+ .++++++++|+++|++||++|||+
T Consensus 652 ~~~~~~~~~~~~~f~f~~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~-~l~q~~~~~~vv~~~~P~~~gl~~ 730 (756)
T PLN02190 652 QGEDDGPNSDSGKFEFDGSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGS-GLAEACGCILVVMLFLPFLKGLFE 730 (756)
T ss_pred cccccchhhhcceeEecceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccc-cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 11 257899999999999999999999999999887753 2234455 459999999999999999999997
Q ss_pred CC-CCcchhHHHHHHHHHHHHHhhhe
Q 002117 919 KQ-DRLPTILLVWAILLASIFSLLWA 943 (964)
Q Consensus 919 R~-~r~P~~v~~~s~~la~~f~~l~v 943 (964)
|+ +|||++|+++|++|+++|+++.|
T Consensus 731 kdkg~iP~s~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 731 KGKYGIPLSTLSKAAFLAVLFVVFSV 756 (756)
T ss_pred CCCCCCChhHHHHHHHHHHHHHhccC
Confidence 65 49999999999999999999875
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.1e-190 Score=1664.70 Aligned_cols=706 Identities=36% Similarity=0.685 Sum_probs=650.4
Q ss_pred cCCCCCeeeeecCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCch-hhHHHHHHHHHHHHHHHHHHhhcccccccccch
Q 002117 142 EGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDA-YGLWLTSVICEIWFAVSWILDQFPKWDPIVRET 220 (964)
Q Consensus 142 ~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~~l~~R~~~~~~~~-~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t 220 (964)
...+||++++++++.. +||+++++++++++++|+||+++...+. .++|+++++||+||+|+|+|+|++||+|++|.|
T Consensus 9 ~~~~pL~~~~~~~~~~--~~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~ 86 (734)
T PLN02893 9 TGAPPLHTCHPMRRTI--ANRVFAVVYSCAILALLYHHVIALLHSTTTLITLLLLLADIVLAFMWATTQAFRMCPVHRRV 86 (734)
T ss_pred CCCCCceeeeecCCch--HHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 3556999999998864 5999999999999999999999976655 789999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhh
Q 002117 221 YLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFAR 300 (964)
Q Consensus 221 ~~drL~~r~~~~~~~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~ 300 (964)
|+|||+++++ .++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||||++|||||.|||+|||
T Consensus 87 ~~~~L~~~~~----~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~ 162 (734)
T PLN02893 87 FIEHLEHYAK----ESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFAT 162 (734)
T ss_pred CHHHHhhhcc----cccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHH
Confidence 9999997663 378999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHhhCCCCCCchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCC-----CC
Q 002117 301 KWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDG-----TP 375 (964)
Q Consensus 301 ~WvPFCkk~~iepraPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg-----~~ 375 (964)
+||||||||+|||||||+||+++. ++|++||+.||+||||||+|||+++++ +++|++ |.|.++ +.
T Consensus 163 ~WvPFCrk~~ie~R~P~~YF~~~~--------~~~~~e~~~~k~~Yee~k~ri~~~~~~-~~~~~~-~~~~~~~~~~f~~ 232 (734)
T PLN02893 163 HWLPFCKKNKIVERCPEAYFSSNS--------HSWSPETEQIKMMYESMKVRVENVVER-GKVSTD-YITCDQEREAFSR 232 (734)
T ss_pred hhcccccccCCCcCCHHHHhccCC--------CccchHHHHHHHHHHHHHHHHHHHHhc-CcCchh-hhhhccccccccc
Confidence 999999999999999999999982 467899999999999999999999977 888887 655443 78
Q ss_pred CCCCC-cCCCccceeEeecCCCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCC
Q 002117 376 WPGNN-VRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYIN 454 (964)
Q Consensus 376 w~~~~-~rdhp~iiqv~~~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~ 454 (964)
|++|+ ++|||+||||+++++++.|.+|++||+|+|||||||||++||+||||||+++||||++||||||||||||||+|
T Consensus 233 w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n 312 (734)
T PLN02893 233 WTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSN 312 (734)
T ss_pred CcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCC
Confidence 98775 68999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCC
Q 002117 455 NSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 534 (964)
Q Consensus 455 ~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~ 534 (964)
||++|++|||||+||+.++++|||||||+|+|++++|+|+|++++||+++|+|+||+|||+||||||+|||+||||..+.
T Consensus 313 ~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~ 392 (734)
T PLN02893 313 DPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS 392 (734)
T ss_pred chhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997431
Q ss_pred CCCCCCCCcCCCCCCccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHH
Q 002117 535 VKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFI 614 (964)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~ 614 (964)
... ++++| +++
T Consensus 393 ~~~-------------------------------------------~~~~~---------------------~~~----- 403 (734)
T PLN02893 393 LIL-------------------------------------------PEIPE---------------------LNP----- 403 (734)
T ss_pred ccc-------------------------------------------hhhhh---------------------ccc-----
Confidence 000 00000 011
Q ss_pred HhhhhhhCCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCC
Q 002117 615 ASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAP 694 (964)
Q Consensus 615 ~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP 694 (964)
.++...+...+++++||+||+||.||++|+||+|+||.|+|+|||+.||++||++|||++||+|++++|.|++|
T Consensus 404 ------~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP 477 (734)
T PLN02893 404 ------DHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSP 477 (734)
T ss_pred ------ccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCC
Confidence 01223345567899999999999999999999999999999999999999999999999999988888999999
Q ss_pred CCHHHHHHHHHHhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchh
Q 002117 695 INLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISN 774 (964)
Q Consensus 695 ~sl~~~l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~ 774 (964)
+|+.++++||+||+.|++|++++++||+++|. ++|++.||++|++.++||++++++++|+++|++||++|++++|+.+.
T Consensus 478 ~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~-~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~ 556 (734)
T PLN02893 478 INLHDVLNQQKRWSVGLLEVAFSKYSPITFGV-KSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASD 556 (734)
T ss_pred CCHHHHHHHHHHHHhhhHHHHhhccCchhhcc-cCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccH
Confidence 99999999999999999999999999999764 78999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCCCc---
Q 002117 775 YASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEF--- 851 (964)
Q Consensus 775 ~~~~~fi~lfls~~~~~lLe~rw~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~--- 851 (964)
.+++.++.+++++++++++|++|+|.++++|||+||+|+|.++++++++++++++|.|++++.+|+||+|+.++++.
T Consensus 557 ~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y 636 (734)
T PLN02893 557 PWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRY 636 (734)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCccccccccc
Confidence 88888888999999999999999999999999999999999999999999999999999999999999999764322
Q ss_pred -ccceeecc-ccchHHHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCC--CcchhH
Q 002117 852 -SDLYLFKW-TSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQD--RLPTIL 927 (964)
Q Consensus 852 -~~ly~f~w-s~L~iP~~~LliLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~--r~P~~v 927 (964)
.++|+|+| +++++|+++++++|++|+++|+++++.+ +.|+.+++++++++|++++++||++||++|+| |||++|
T Consensus 637 ~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~--~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v 714 (734)
T PLN02893 637 EQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ--RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKI 714 (734)
T ss_pred ccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccH
Confidence 37899995 8899999999999999999999999875 35788899999999999999999999999986 999999
Q ss_pred HHHHHHHHHHHHhh
Q 002117 928 LVWAILLASIFSLL 941 (964)
Q Consensus 928 ~~~s~~la~~f~~l 941 (964)
++||++||.++.++
T Consensus 715 ~~~s~~l~~~~~~~ 728 (734)
T PLN02893 715 TLISIVLAWALYLA 728 (734)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888765
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=4.1e-67 Score=633.32 Aligned_cols=490 Identities=25% Similarity=0.384 Sum_probs=386.3
Q ss_pred HHH-HHHHHHHHHHHHHHHhhcCCCch----hhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCC
Q 002117 162 RLI-ILLRLVILGLFFHYRILHPVNDA----YGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPS 236 (964)
Q Consensus 162 R~~-~~~~l~~~~~~l~~R~~~~~~~~----~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~~~~~ 236 (964)
|++ +++.+++.++|++||++.+++.. ..+.++++++|+++.++.++..+..+.|.+|...+ .+.+++
T Consensus 57 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~--------~~~~~~ 128 (713)
T TIGR03030 57 RLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVP--------LPLDPE 128 (713)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccC--------CCCCcc
Confidence 664 55566668999999999987643 23567899999999999888888888888876432 223457
Q ss_pred CCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCc
Q 002117 237 DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAP 316 (964)
Q Consensus 237 ~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraP 316 (964)
.+|+|||+||||| |++.++.+|+.+++++|||.+|+.|||+|||+++-|.....
T Consensus 129 ~~P~VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~----------------------- 182 (713)
T TIGR03030 129 EWPTVDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPD----------------------- 182 (713)
T ss_pred cCCeeEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccch-----------------------
Confidence 8999999999999 99999999999999999999999999999999874322111
Q ss_pred hhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCC
Q 002117 317 EWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNG 396 (964)
Q Consensus 317 e~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g 396 (964)
+...|. ++..++ +.+++++
T Consensus 183 -----------------~~~~~~---~~~~~~----~~~l~~~------------------------------------- 201 (713)
T TIGR03030 183 -----------------PEQAEA---AQRREE----LKEFCRK------------------------------------- 201 (713)
T ss_pred -----------------hhhhhh---hhhHHH----HHHHHHH-------------------------------------
Confidence 011110 000111 1222211
Q ss_pred cccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcce
Q 002117 397 VRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKI 475 (964)
Q Consensus 397 ~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff-~Dp~~g~~v 475 (964)
.++.|++|++ |+|+||||||++++ .++||||+++|||++ ++|++|++++++| .|| ++
T Consensus 202 ---------~~v~yi~r~~----n~~~KAgnLN~al~----~a~gd~Il~lDAD~v-~~pd~L~~~v~~f~~dp----~v 259 (713)
T TIGR03030 202 ---------LGVNYITRPR----NVHAKAGNINNALK----HTDGELILIFDADHV-PTRDFLQRTVGWFVEDP----KL 259 (713)
T ss_pred ---------cCcEEEECCC----CCCCChHHHHHHHH----hcCCCEEEEECCCCC-cChhHHHHHHHHHHhCC----CE
Confidence 0378999988 78999999999999 589999999999997 7999999999988 588 89
Q ss_pred EEEecCeeecCCCcc-------cccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCC
Q 002117 476 CYVQFPQRFDGIDRH-------DRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLP 548 (964)
Q Consensus 476 ~~VQ~PQ~F~n~d~~-------d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~ 548 (964)
|+||+||.|+|.|+. +++.+++..||..+++|+|.++++++|||++++||+||
T Consensus 260 ~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al-------------------- 319 (713)
T TIGR03030 260 FLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREAL-------------------- 319 (713)
T ss_pred EEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHH--------------------
Confidence 999999999998753 34567888999999999999999999999999999888
Q ss_pred CccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCC
Q 002117 549 KWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGA 628 (964)
Q Consensus 549 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~ 628 (964)
+++||+++
T Consensus 320 ----------------------------------------------------------------------~~iGGf~~-- 327 (713)
T TIGR03030 320 ----------------------------------------------------------------------DEIGGIAG-- 327 (713)
T ss_pred ----------------------------------------------------------------------HHcCCCCC--
Confidence 24576643
Q ss_pred chhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhh
Q 002117 629 STASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWA 708 (964)
Q Consensus 629 ~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa 708 (964)
++++||++++++|+++||+++|++++.. .|++|+|++++++||.||+
T Consensus 328 -------------------------------~~vtED~~l~~rL~~~G~~~~y~~~~~~--~g~~p~sl~~~~~Qr~RWa 374 (713)
T TIGR03030 328 -------------------------------ETVTEDAETALKLHRRGWNSAYLDRPLI--AGLAPETLSGHIGQRIRWA 374 (713)
T ss_pred -------------------------------CCcCcHHHHHHHHHHcCCeEEEeccccc--cccCCCCHHHHHHHHHHHh
Confidence 6899999999999999999999976544 8999999999999999999
Q ss_pred cchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHH
Q 002117 709 LGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIA 788 (964)
Q Consensus 709 ~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~ 788 (964)
+|++|+++. .+|++ .+++++.||++|+++++||+.++++++|+++|++++++|..+++... ..++.++++++
T Consensus 375 ~G~~qi~~~-~~pl~---~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~----~~~~~~~lp~~ 446 (713)
T TIGR03030 375 QGMMQIFRL-DNPLL---KRGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVASA----LEILAYALPHM 446 (713)
T ss_pred cChHHHHhh-hCccc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCCH----HHHHHHHHHHH
Confidence 999999975 58987 68999999999999999999999999999999999999999987532 22334456777
Q ss_pred HHHHHHhhc-cCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCCCcccceeeccccchHHHH
Q 002117 789 ATGILEMQW-GGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPL 867 (964)
Q Consensus 789 ~~~lLe~rw-~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~L~iP~~ 867 (964)
+.+++.+.| .|.....||+ |.|. .+ ...+.+...+.+.+++++.+|+||+|++..++. ..++++.|++
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~-~~~~---~~-~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~------~~~~~~~p~~ 515 (713)
T TIGR03030 447 LHSLLTNSYLFGRVRWPFWS-EVYE---TV-LAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED------YFSPLSRPYL 515 (713)
T ss_pred HHHHHHHHHHcCCeecchHH-HHHH---HH-HHHHHHHHHHHHHhCcCCCCceecCCCcccccc------ccchHHHHHH
Confidence 777766444 4444566774 4443 22 222334455666789999999999999753221 1235899999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHh
Q 002117 868 TLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGF 916 (964)
Q Consensus 868 ~LliLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL 916 (964)
+++++|++|+++|+++.+..+ ....+.+++++|.++|++-+..++
T Consensus 516 ~l~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~w~~~n~~~~~~~~ 560 (713)
T TIGR03030 516 ILFALILAGLAFGLYRIYGYP----IERGVLLVVLGWNLLNLILLGAAL 560 (713)
T ss_pred HHHHHHHHHHHHHHHHHhcCc----cccchhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999986433 223466899999999999887777
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=8.6e-67 Score=631.58 Aligned_cols=472 Identities=25% Similarity=0.409 Sum_probs=376.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCch----hhHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCCCCC
Q 002117 164 IILLRLVILGLFFHYRILHPVNDA----YGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLA 239 (964)
Q Consensus 164 ~~~~~l~~~~~~l~~R~~~~~~~~----~~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~~~~~~~~lp 239 (964)
++++.+++.++|++||++.+++.. ..+.++++++|+++.++.+++.+..+.|..|... +.+...+.+|
T Consensus 189 l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--------~~~~~~~~~P 260 (852)
T PRK11498 189 LIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--------PLPKDMSLWP 260 (852)
T ss_pred HHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--------CCCcccCCCC
Confidence 456777788999999999987643 4456778999999999889888888888877532 1222346789
Q ss_pred ceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhh
Q 002117 240 DIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWY 319 (964)
Q Consensus 240 ~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~Y 319 (964)
+|||+||||| ||..++.+|+.+++++|||.+|+.|||+|||.++-| .++ |++
T Consensus 261 ~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-------~~l-------a~~----------- 312 (852)
T PRK11498 261 TVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-------RQF-------AQE----------- 312 (852)
T ss_pred cEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-------HHH-------HHH-----------
Confidence 9999999999 999999999999999999999999999999998611 000 000
Q ss_pred hhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCccc
Q 002117 320 FAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRD 399 (964)
Q Consensus 320 Fs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d 399 (964)
T Consensus 313 -------------------------------------------------------------------------------- 312 (852)
T PRK11498 313 -------------------------------------------------------------------------------- 312 (852)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHh-hcCCCCCcceEEE
Q 002117 400 IEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCF-MMDPTSGKKICYV 478 (964)
Q Consensus 400 ~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcf-f~Dp~~g~~v~~V 478 (964)
.++.|++|++ |.|+||||+|++++ .++||||+++||||+ +++++|+++|++ +.|| ++|+|
T Consensus 313 ------~~v~yI~R~~----n~~gKAGnLN~aL~----~a~GEyIavlDAD~i-p~pdfL~~~V~~f~~dP----~VglV 373 (852)
T PRK11498 313 ------VGVKYIARPT----HEHAKAGNINNALK----YAKGEFVAIFDCDHV-PTRSFLQMTMGWFLKDK----KLAMM 373 (852)
T ss_pred ------CCcEEEEeCC----CCcchHHHHHHHHH----hCCCCEEEEECCCCC-CChHHHHHHHHHHHhCC----CeEEE
Confidence 0267999887 67899999999999 589999999999996 899999999986 4788 89999
Q ss_pred ecCeeecCCCccc-------ccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcc
Q 002117 479 QFPQRFDGIDRHD-------RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWC 551 (964)
Q Consensus 479 Q~PQ~F~n~d~~d-------~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~ 551 (964)
|+||.|+|.|+.. .+.++++.||+..++|+|.++++++|||++++||+||
T Consensus 374 Qtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaL----------------------- 430 (852)
T PRK11498 374 QTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPL----------------------- 430 (852)
T ss_pred EcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHH-----------------------
Confidence 9999999987642 3567888999999999999999999999999999888
Q ss_pred ccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchh
Q 002117 552 CCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTA 631 (964)
Q Consensus 552 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~ 631 (964)
+|+||+++
T Consensus 431 -------------------------------------------------------------------eeVGGfd~----- 438 (852)
T PRK11498 431 -------------------------------------------------------------------DEIGGIAV----- 438 (852)
T ss_pred -------------------------------------------------------------------HHhcCCCC-----
Confidence 35687764
Q ss_pred hHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcch
Q 002117 632 SLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 711 (964)
Q Consensus 632 ~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~ 711 (964)
++++||++++++|+++||+++|++++.+ .|++|+|++++++||.||++|+
T Consensus 439 ----------------------------~titED~dlslRL~~~Gyrv~yl~~~~a--~glaPesl~~~~~QR~RWarG~ 488 (852)
T PRK11498 439 ----------------------------ETVTEDAHTSLRLHRRGYTSAYMRIPQA--AGLATESLSAHIGQRIRWARGM 488 (852)
T ss_pred ----------------------------CccCccHHHHHHHHHcCCEEEEEeccce--eEECCCCHHHHHHHHHHHHHHH
Confidence 5899999999999999999999976554 7999999999999999999999
Q ss_pred hHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHH
Q 002117 712 VEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATG 791 (964)
Q Consensus 712 lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~ 791 (964)
+|+++ +++|++ .+++++.||++|+++++|++.++++++|+++|++|+++|..++.+.. ..++++++|+++..
T Consensus 489 lQi~r-~~~pl~---~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a~~----~~i~~y~lP~~~~~ 560 (852)
T PRK11498 489 VQIFR-LDNPLT---GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAPA----LMIALFVLPHMIHA 560 (852)
T ss_pred HHHHH-HhChhc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeCCh----HHHHHHHHHHHHHH
Confidence 99996 468987 68999999999999999999999999999999999999998885321 12233445666555
Q ss_pred HHHhhc-cCcccccccccchhHHHHHHHHHHHHHHHHHHHHhcCCccceeeCCCCCCCCCcccceeeccccchHHHHHHH
Q 002117 792 ILEMQW-GGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPLTLL 870 (964)
Q Consensus 792 lLe~rw-~G~s~~~wWr~e~~W~I~~vsa~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~L~iP~~~Ll 870 (964)
.+...| +|.....||+ |. +..++++.++ ...+...+++++.+|+||+|++..++. .|+|. +..|+++++
T Consensus 561 ~l~~~~~~g~~r~~~ws-ei---ye~v~a~~l~-~~~~~~ll~p~~~~F~VTpKg~~~~~~----~~~~~-~~~P~~~L~ 630 (852)
T PRK11498 561 SLTNSRIQGKYRHSFWS-EI---YETVLAWYIA-PPTTVALFNPHKGKFNVTAKGGLVEEE----YVDWV-ISRPYIFLV 630 (852)
T ss_pred HHHHHHhcCcchHhHHH-HH---HHHHHHHHHH-HHHHHHHcCccCCCcccCCCCcccccc----ceehH-HHHHHHHHH
Confidence 554443 3333334442 32 3334444333 223444678999999999999763321 25664 678999999
Q ss_pred HHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHh
Q 002117 871 VFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGF 916 (964)
Q Consensus 871 iLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL 916 (964)
++|++|+++|+++...+.. ....+.+++++|+++|++-+..++
T Consensus 631 ~L~l~gl~~g~~r~~~~~~---~~~~~~~~~~~W~~~nl~~l~~a~ 673 (852)
T PRK11498 631 LLNLVGVAVGIWRYFYGPP---NEILTVIVSLVWVFYNLIILGGAV 673 (852)
T ss_pred HHHHHHHHHHHHHHHhCCc---ccchhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999875431 234456799999999998877666
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.1e-35 Score=356.58 Aligned_cols=361 Identities=19% Similarity=0.227 Sum_probs=244.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCCchh---------hHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhh
Q 002117 160 PYRLIILLRLVILGLFFHYRILHPVNDAY---------GLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYE 230 (964)
Q Consensus 160 ~~R~~~~~~l~~~~~~l~~R~~~~~~~~~---------~~wl~~~~~E~~~~~~wil~~~~kw~Pi~r~t~~drL~~r~~ 230 (964)
..|+++++..++...+..|+....++... .+..+.+..+.+.+.+-+++.+.... .|... .+...-.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~--~~~~~~~ 115 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKY--SISASAA 115 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcc--cCCcccc
Confidence 46777777788889999999987543221 11122333333333333334332211 11111 0100000
Q ss_pred cCCCCCCCCceeEEEecCCCCCCChHHH----HHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHH
Q 002117 231 KEGKPSDLADIDIFVSTVDPMKEPPLIT----ANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFC 306 (964)
Q Consensus 231 ~~~~~~~lp~VDvfV~T~dp~kEp~~v~----~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFC 306 (964)
.+......|.|+|+||+|| |++..+ ..|+.|+.+.||| +++.+||+|||.++-+-.
T Consensus 116 ~~~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~---------------- 175 (691)
T PRK05454 116 GDPPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAA---------------- 175 (691)
T ss_pred cCCCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHH----------------
Confidence 1123456799999999999 998754 5555677779998 589999999999873211
Q ss_pred HhhCCCCCCchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCcc
Q 002117 307 KKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPG 386 (964)
Q Consensus 307 kk~~iepraPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~ 386 (964)
.|+ +.++++..+.
T Consensus 176 ------------------------------~e~----~~~~~L~~~~--------------------------------- 188 (691)
T PRK05454 176 ------------------------------AEE----AAWLELRAEL--------------------------------- 188 (691)
T ss_pred ------------------------------HHH----HHHHHHHHhc---------------------------------
Confidence 111 1233332110
Q ss_pred ceeEeecCCCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh
Q 002117 387 MIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM 466 (964)
Q Consensus 387 iiqv~~~~~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff 466 (964)
+ .-+++.|.+|++ |.|+||||+|.+++.++ .+++||+++|||++ +.+++|++++.+|
T Consensus 189 ---------~-------~~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivvLDADs~-m~~d~L~~lv~~m 245 (691)
T PRK05454 189 ---------G-------GEGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVVLDADSL-MSGDTLVRLVRLM 245 (691)
T ss_pred ---------C-------CCCcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEEEcCCCC-CCHHHHHHHHHHH
Confidence 0 012589988887 78899999999999554 57799999999997 7899999999988
Q ss_pred c-CCCCCcceEEEecCeeecCCCcc-ccccc-chhhhhhhcccccccCCC--cccccccchhhhhhhcCCCCCCCCCCCC
Q 002117 467 M-DPTSGKKICYVQFPQRFDGIDRH-DRYSN-RNVVFFDINMKGLDGIQG--PIYVGTGCVFRRQALYGYDAPVKKKPPR 541 (964)
Q Consensus 467 ~-Dp~~g~~v~~VQ~PQ~F~n~d~~-d~~~n-~~~vffdi~~~gldg~qg--p~y~GTg~v~RR~ALyG~~p~~~~~~~~ 541 (964)
. || ++|.||+|+.+.|.+.- .|..+ ...++.++...|++.||+ ..|+|+|+++||+||..
T Consensus 246 ~~dP----~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~----------- 310 (691)
T PRK05454 246 EANP----RAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE----------- 310 (691)
T ss_pred hhCc----CEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH-----------
Confidence 5 99 89999999999887631 22222 234555666788887773 57999999999999952
Q ss_pred CcCCCCCCccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhh
Q 002117 542 KTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEA 621 (964)
Q Consensus 542 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~ 621 (964)
|||... +.+.
T Consensus 311 ------------~~glp~----------------------------------------------------------L~g~ 320 (691)
T PRK05454 311 ------------HCGLPP----------------------------------------------------------LPGR 320 (691)
T ss_pred ------------hcCCcc----------------------------------------------------------cccc
Confidence 122110 0112
Q ss_pred CCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHH
Q 002117 622 GGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRL 701 (964)
Q Consensus 622 GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l 701 (964)
| ||..++++||++++.+|+++||+++|+++ ...+++++|+|+.+++
T Consensus 321 ~---------------------------------p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl~~~~ 366 (691)
T PRK05454 321 G---------------------------------PFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNLLDEL 366 (691)
T ss_pred C---------------------------------CCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCHHHHH
Confidence 2 33346899999999999999999999965 3335899999999999
Q ss_pred HHHHHhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHH-HHHHHH
Q 002117 702 HQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAY-CTLPAI 760 (964)
Q Consensus 702 ~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liy-lllP~l 760 (964)
+||.||++|++|.+.. +. .+++++.+|++|++.++.++.+...+++ ++.|++
T Consensus 367 ~qr~RW~~G~lQ~l~~----l~---~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~ 419 (691)
T PRK05454 367 KRDRRWCQGNLQHLRL----LL---AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTAL 419 (691)
T ss_pred HHHHHHHhchHHHHHH----HH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998842 23 5789999999998877766665443333 334443
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=7.5e-34 Score=305.62 Aligned_cols=182 Identities=22% Similarity=0.331 Sum_probs=145.4
Q ss_pred CcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecCeee
Q 002117 406 PRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFPQRF 484 (964)
Q Consensus 406 P~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~-Dp~~g~~v~~VQ~PQ~F 484 (964)
++++|++|++ ++|+||||||+++... .+++|||+++|||+. +.|++|++++.+|. || ++|.||+||+|
T Consensus 67 ~~v~~~~r~~----~~g~Kag~l~~~~~~~--~~~~~~i~~~DaD~~-~~p~~l~~~v~~~~~~~----~vg~vq~~~~~ 135 (254)
T cd04191 67 GRIYYRRRRE----NTGRKAGNIADFCRRW--GSRYDYMVVLDADSL-MSGDTIVRLVRRMEANP----RAGIIQTAPKL 135 (254)
T ss_pred CcEEEEEcCC----CCCccHHHHHHHHHHh--CCCCCEEEEEeCCCC-CCHHHHHHHHHHHHhCC----CEEEEeCCcee
Confidence 4699999999 6779999999999842 168899999999996 89999999999885 99 89999999999
Q ss_pred cCCCcc-ccccc-chhhhhhhcccccccCCC--cccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002117 485 DGIDRH-DRYSN-RNVVFFDINMKGLDGIQG--PIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 560 (964)
Q Consensus 485 ~n~d~~-d~~~n-~~~vffdi~~~gldg~qg--p~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 560 (964)
.|.+.. .+..+ ++..|..+.+.|++.|++ .+++||+.++||+||... | +
T Consensus 136 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~----------------------~-~---- 188 (254)
T cd04191 136 IGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH----------------------C-A---- 188 (254)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh----------------------c-C----
Confidence 987642 22211 345666777888887765 589999999999998411 0 0
Q ss_pred cccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHh
Q 002117 561 SKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHV 640 (964)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v 640 (964)
+.++||+.
T Consensus 189 ---------------------------------------------------------~~~i~g~g--------------- 196 (254)
T cd04191 189 ---------------------------------------------------------LPVLPGRP--------------- 196 (254)
T ss_pred ---------------------------------------------------------CccccCCC---------------
Confidence 01233331
Q ss_pred hccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhH
Q 002117 641 ISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 713 (964)
Q Consensus 641 ~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQ 713 (964)
||..++++||+++|++++.+||+++|.+... +.++++|++++++++||.||++|++|
T Consensus 197 ---------------~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~-~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 197 ---------------PFGGHILSHDFVEAALMRRAGWEVRLAPDLE-GSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ---------------CCCCCeecHHHHHHHHHHHcCCEEEEccCCc-ceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 4556799999999999999999999996533 23789999999999999999999998
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=1.3e-30 Score=295.50 Aligned_cols=233 Identities=28% Similarity=0.441 Sum_probs=172.4
Q ss_pred CCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCch
Q 002117 238 LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPE 317 (964)
Q Consensus 238 lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe 317 (964)
+|.|||+||+|| |++.++.+|+.|++++|||. +.|+|.|||+++-|++ +|++++.+
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~--------------~~~~~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYE--------------ILEELGAE----- 108 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHH--------------HHHHHHhh-----
Confidence 699999999999 99999999999999999996 7899999999985544 22222100
Q ss_pred hhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCc
Q 002117 318 WYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGV 397 (964)
Q Consensus 318 ~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~ 397 (964)
| +..++
T Consensus 109 ----------------------------~--------------------------------------~~~~~-------- 114 (439)
T COG1215 109 ----------------------------Y--------------------------------------GPNFR-------- 114 (439)
T ss_pred ----------------------------c--------------------------------------CcceE--------
Confidence 0 00011
Q ss_pred ccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEE
Q 002117 398 RDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICY 477 (964)
Q Consensus 398 ~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~ 477 (964)
+.|. ++ ++++|+||+|.++. .+.+|+|+++|||++ +.+++|++++..|.|+. .+|.
T Consensus 115 ----------~~~~--~~----~~~gK~~al~~~l~----~~~~d~V~~~DaD~~-~~~d~l~~~~~~f~~~~---~~~v 170 (439)
T COG1215 115 ----------VIYP--EK----KNGGKAGALNNGLK----RAKGDVVVILDADTV-PEPDALRELVSPFEDPP---VGAV 170 (439)
T ss_pred ----------EEec--cc----cCccchHHHHHHHh----hcCCCEEEEEcCCCC-CChhHHHHHHhhhcCCC---eeEE
Confidence 1111 22 67899999999999 567999999999996 89999999999999884 4479
Q ss_pred EecCeeecCCCcccccccchhhhhhh-----cccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccc
Q 002117 478 VQFPQRFDGIDRHDRYSNRNVVFFDI-----NMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCC 552 (964)
Q Consensus 478 VQ~PQ~F~n~d~~d~~~n~~~vffdi-----~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~ 552 (964)
+|.||.+.+.+.....+..+.+.|.. ...+.++....+++|++.++||+||
T Consensus 171 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL------------------------ 226 (439)
T COG1215 171 VGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSAL------------------------ 226 (439)
T ss_pred eCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHH------------------------
Confidence 99999998876411111112111211 1112222234455555555555554
Q ss_pred cccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhh
Q 002117 553 CCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTAS 632 (964)
Q Consensus 553 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~ 632 (964)
+|.||
T Consensus 227 ------------------------------------------------------------------~~~g~--------- 231 (439)
T COG1215 227 ------------------------------------------------------------------EEVGG--------- 231 (439)
T ss_pred ------------------------------------------------------------------HHhCC---------
Confidence 55664
Q ss_pred HHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchh
Q 002117 633 LLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSV 712 (964)
Q Consensus 633 ~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~l 712 (964)
|...++|||.+++++++.+|||+.|++++ .+++++|+|+.++++||.||++|++
T Consensus 232 ------------------------~~~~~i~ED~~lt~~l~~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~~ 285 (439)
T COG1215 232 ------------------------WLEDTITEDADLTLRLHLRGYRVVYVPEA--IVWTEAPETLKELWRQRLRWARGGL 285 (439)
T ss_pred ------------------------CCCCceeccHHHHHHHHHCCCeEEEeecc--eEeeeCcccHHHHHHHHHHHHcccc
Confidence 44579999999999999999999999764 3499999999999999999999999
Q ss_pred HHHHh
Q 002117 713 EILLS 717 (964)
Q Consensus 713 Qil~~ 717 (964)
|++..
T Consensus 286 ~~~~~ 290 (439)
T COG1215 286 QVLLL 290 (439)
T ss_pred eeeeh
Confidence 99965
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.97 E-value=1.2e-28 Score=283.92 Aligned_cols=230 Identities=21% Similarity=0.247 Sum_probs=165.7
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCC
Q 002117 236 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRA 315 (964)
Q Consensus 236 ~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepra 315 (964)
...|.|+|+||+|| |+. .+.+|+.|++++||| ++.++|.|||+++-|.+.+.+
T Consensus 72 ~~~p~vsViIP~yN---E~~-~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~--------------------- 124 (444)
T PRK14583 72 KGHPLVSILVPCFN---EGL-NARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDA--------------------- 124 (444)
T ss_pred CCCCcEEEEEEeCC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHH---------------------
Confidence 35799999999999 885 578999999999999 489999999998743332111
Q ss_pred chhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCC
Q 002117 316 PEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQN 395 (964)
Q Consensus 316 Pe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~ 395 (964)
+ .++
T Consensus 125 ---------------------------------~-------~~~------------------------------------ 128 (444)
T PRK14583 125 ---------------------------------L-------LAE------------------------------------ 128 (444)
T ss_pred ---------------------------------H-------HHh------------------------------------
Confidence 0 000
Q ss_pred CcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcc
Q 002117 396 GVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKK 474 (964)
Q Consensus 396 g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff-~Dp~~g~~ 474 (964)
.|++.++.+++ .+.||+|+|++++ .+++|||+++|+|++ ++|++|++.+..| .|| +
T Consensus 129 ---------~~~v~vv~~~~-----n~Gka~AlN~gl~----~a~~d~iv~lDAD~~-~~~d~L~~lv~~~~~~~----~ 185 (444)
T PRK14583 129 ---------DPRLRVIHLAH-----NQGKAIALRMGAA----AARSEYLVCIDGDAL-LDKNAVPYLVAPLIANP----R 185 (444)
T ss_pred ---------CCCEEEEEeCC-----CCCHHHHHHHHHH----hCCCCEEEEECCCCC-cCHHHHHHHHHHHHhCC----C
Confidence 02244555443 2359999999998 478999999999996 8999999999755 567 8
Q ss_pred eEEEecCeeecCCCccccccc----chhhhhhhcccccccCCCccc-ccccchhhhhhhcCCCCCCCCCCCCCcCCCCCC
Q 002117 475 ICYVQFPQRFDGIDRHDRYSN----RNVVFFDINMKGLDGIQGPIY-VGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPK 549 (964)
Q Consensus 475 v~~VQ~PQ~F~n~d~~d~~~n----~~~vffdi~~~gldg~qgp~y-~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~ 549 (964)
++.||..++..|.+ ...+. +...++....++.+..+..+. .|+++.|||+|
T Consensus 186 ~g~v~g~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~a---------------------- 241 (444)
T PRK14583 186 TGAVTGNPRIRTRS--TLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRA---------------------- 241 (444)
T ss_pred eEEEEccceecCCC--cchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHH----------------------
Confidence 99999987765532 11111 222223333333333322222 24444455444
Q ss_pred ccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCc
Q 002117 550 WCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGAS 629 (964)
Q Consensus 550 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~ 629 (964)
++++||++
T Consensus 242 --------------------------------------------------------------------l~~vGg~~---- 249 (444)
T PRK14583 242 --------------------------------------------------------------------LADVGYWS---- 249 (444)
T ss_pred --------------------------------------------------------------------HHHcCCCC----
Confidence 45667554
Q ss_pred hhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhc
Q 002117 630 TASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWAL 709 (964)
Q Consensus 630 ~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~ 709 (964)
.+.++||++++++++.+||++.|++.. .+++++|+|++++++||.||++
T Consensus 250 -----------------------------~~~i~ED~dl~~rl~~~G~~i~~~p~a--~~~~~~p~t~~~~~~Qr~RW~~ 298 (444)
T PRK14583 250 -----------------------------PDMITEDIDISWKLQLKHWSVFFEPRG--LCWILMPETLRGLWKQRLRWAQ 298 (444)
T ss_pred -----------------------------CCcccccHHHHHHHHHcCCeEEEeecc--EEeeeCCCCHHHHHHHHHHHhC
Confidence 368999999999999999999999753 4599999999999999999999
Q ss_pred chhHHHHhh
Q 002117 710 GSVEILLSR 718 (964)
Q Consensus 710 G~lQil~~k 718 (964)
|.+|+++++
T Consensus 299 G~~~~~~~~ 307 (444)
T PRK14583 299 GGAEVFLKN 307 (444)
T ss_pred cHHHHHHHH
Confidence 999999764
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=1.9e-27 Score=270.64 Aligned_cols=236 Identities=26% Similarity=0.335 Sum_probs=164.9
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCC
Q 002117 235 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 314 (964)
Q Consensus 235 ~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepr 314 (964)
....|.|.|+||+|| |+ ..+.+|+.|+++++|| ++.++|.|||.++-|.+.+.
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~--------------------- 102 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILD--------------------- 102 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHH---------------------
Confidence 356899999999999 86 6789999999999999 57899999999873322111
Q ss_pred CchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecC
Q 002117 315 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 394 (964)
Q Consensus 315 aPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~ 394 (964)
++ .+ +
T Consensus 103 ---------------------------------~~-------~~------------------------~----------- 107 (420)
T PRK11204 103 ---------------------------------RL-------AA------------------------Q----------- 107 (420)
T ss_pred ---------------------------------HH-------HH------------------------h-----------
Confidence 10 00 0
Q ss_pred CCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCc
Q 002117 395 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGK 473 (964)
Q Consensus 395 ~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff-~Dp~~g~ 473 (964)
.|++.++.++++ ..||+|+|.+++ .+++||++++|+|.+ +.|++|++++..| .||
T Consensus 108 ----------~~~v~~i~~~~n-----~Gka~aln~g~~----~a~~d~i~~lDaD~~-~~~d~L~~l~~~~~~~~---- 163 (420)
T PRK11204 108 ----------IPRLRVIHLAEN-----QGKANALNTGAA----AARSEYLVCIDGDAL-LDPDAAAYMVEHFLHNP---- 163 (420)
T ss_pred ----------CCcEEEEEcCCC-----CCHHHHHHHHHH----HcCCCEEEEECCCCC-CChhHHHHHHHHHHhCC----
Confidence 124667776552 359999999999 578999999999996 7999999999987 588
Q ss_pred ceEEEecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccc
Q 002117 474 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCC 553 (964)
Q Consensus 474 ~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~ 553 (964)
+++.||...+..|... ..+..+...|.... |..-+-+..+|.. .
T Consensus 164 ~v~~v~g~~~~~~~~~--~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~--------------------~ 207 (420)
T PRK11204 164 RVGAVTGNPRIRNRST--LLGRIQVGEFSSII--------------GLIKRAQRVYGRV--------------------F 207 (420)
T ss_pred CeEEEECCceeccchh--HHHHHHHHHHHHhh--------------hHHHHHHHHhCCc--------------------e
Confidence 8999999877665321 11111111110000 0000001111100 0
Q ss_pred ccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhH
Q 002117 554 CCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASL 633 (964)
Q Consensus 554 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~ 633 (964)
| --|....|++++++++||+.+
T Consensus 208 ~---------------------------------------------------~~G~~~~~rr~~l~~vgg~~~------- 229 (420)
T PRK11204 208 T---------------------------------------------------VSGVITAFRKSALHEVGYWST------- 229 (420)
T ss_pred E---------------------------------------------------ecceeeeeeHHHHHHhCCCCC-------
Confidence 0 002223445555667786654
Q ss_pred HHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhH
Q 002117 634 LNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 713 (964)
Q Consensus 634 l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQ 713 (964)
+.++||++++++++++||++.|+++. .++++.|+|++++++||.||++|++|
T Consensus 230 --------------------------~~~~ED~~l~~rl~~~G~~i~~~p~~--~~~~~~p~t~~~~~~Qr~RW~~G~~~ 281 (420)
T PRK11204 230 --------------------------DMITEDIDISWKLQLRGWDIRYEPRA--LCWILMPETLKGLWKQRLRWAQGGAE 281 (420)
T ss_pred --------------------------CcccchHHHHHHHHHcCCeEEecccc--EEEeECcccHHHHHHHHHHHhcCHHH
Confidence 57899999999999999999999754 44999999999999999999999999
Q ss_pred HHHhh
Q 002117 714 ILLSR 718 (964)
Q Consensus 714 il~~k 718 (964)
.++++
T Consensus 282 ~l~~~ 286 (420)
T PRK11204 282 VLLKN 286 (420)
T ss_pred HHHHH
Confidence 99764
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.96 E-value=1.6e-27 Score=274.64 Aligned_cols=288 Identities=16% Similarity=0.168 Sum_probs=191.4
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCC
Q 002117 235 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 314 (964)
Q Consensus 235 ~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepr 314 (964)
++.+|.|+|+||+|| |+ ..+.+||.|+++++||.+++.|+|.|||+++-|.+.+.|+
T Consensus 45 ~~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~------------------- 101 (439)
T TIGR03111 45 IGKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRA------------------- 101 (439)
T ss_pred cCCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHH-------------------
Confidence 467899999999999 77 7899999999999999999999999999987544322211
Q ss_pred CchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecC
Q 002117 315 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 394 (964)
Q Consensus 315 aPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~ 394 (964)
+. .+
T Consensus 102 -----------------------------------~~-------------------------------~~---------- 105 (439)
T TIGR03111 102 -----------------------------------QN-------------------------------EF---------- 105 (439)
T ss_pred -----------------------------------HH-------------------------------hC----------
Confidence 00 00
Q ss_pred CCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCc
Q 002117 395 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGK 473 (964)
Q Consensus 395 ~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~-Dp~~g~ 473 (964)
|+ +++.+.+ +.+.||+|+|++++ .++++||+++|+|++ ++|++|++++..|. ||
T Consensus 106 -----------~~-v~v~~~~----~~~Gka~AlN~gl~----~s~g~~v~~~DaD~~-~~~d~L~~l~~~f~~~~---- 160 (439)
T TIGR03111 106 -----------PG-LSLRYMN----SDQGKAKALNAAIY----NSIGKYIIHIDSDGK-LHKDAIKNMVTRFENNP---- 160 (439)
T ss_pred -----------CC-eEEEEeC----CCCCHHHHHHHHHH----HccCCEEEEECCCCC-cChHHHHHHHHHHHhCC----
Confidence 11 1222111 23579999999999 578999999999997 79999999999775 77
Q ss_pred ceEEEecCeeecCCCcccc-------cccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCC
Q 002117 474 KICYVQFPQRFDGIDRHDR-------YSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNC 546 (964)
Q Consensus 474 ~v~~VQ~PQ~F~n~d~~d~-------~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~ 546 (964)
+++.|+..+.-. .+..+. +..+.. +++... ..+.|. +...
T Consensus 161 ~v~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~-~~~y~~--------------------~~l~~r-~~~s---------- 207 (439)
T TIGR03111 161 DIHAMTGVILTD-KELIEKTKGRFLKLIRRCE-YFEYAQ--------------------AFLAGR-NFES---------- 207 (439)
T ss_pred CeEEEEeEEecC-chhhhhhcchhhhHhHHhH-HHHHHH--------------------HHHhhh-HHHH----------
Confidence 676665544221 110000 000000 011000 000000 0000
Q ss_pred CCCccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCC
Q 002117 547 LPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPT 626 (964)
Q Consensus 547 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~ 626 (964)
..+..|+ --|....|+++++++.||+++
T Consensus 208 --~~~~~~~--------------------------------------------------~sGa~~~~Rr~~l~~vggf~~ 235 (439)
T TIGR03111 208 --QVNSLFT--------------------------------------------------LSGAFSAFRRETILKTQLYNS 235 (439)
T ss_pred --hcCCeEE--------------------------------------------------EccHHHhhhHHHHHHhCCCCC
Confidence 0000000 014445677777888887754
Q ss_pred CCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHH-CCCEEEEeCCCCCcccccCCCCHHHHHHHHH
Q 002117 627 GASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHC-HGWRSVYCIPKRPAFKGSAPINLSDRLHQVL 705 (964)
Q Consensus 627 ~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~-~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~ 705 (964)
++++||++++++++. .|+++.|+++ +.++.++|+|++++++||.
T Consensus 236 ---------------------------------~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~~~~QR~ 280 (439)
T TIGR03111 236 ---------------------------------ETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNKLYTQRQ 280 (439)
T ss_pred ---------------------------------CCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHHHHHHHH
Confidence 589999999999975 6999999965 4558999999999999999
Q ss_pred HhhcchhHHHHhhccccccccCCCCCcchhhhHhhhhhHHhHHHHHHHHHHHHHHHHHhCCccc
Q 002117 706 RWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIV 769 (964)
Q Consensus 706 RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ii 769 (964)
||++|.+|++.....+.. +.+.++.+++.+..........++++++.++++++.++|.++.
T Consensus 281 RW~rG~~qv~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 281 RWQRGELEVSHMFFESAN---KSIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHhccHHHHHHHHHhhhh---hchhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999965433332 3446666666554445555557788888888888887776544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=3.8e-25 Score=258.11 Aligned_cols=266 Identities=19% Similarity=0.198 Sum_probs=179.0
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCC
Q 002117 236 SDLADIDIFVSTVDPMKEPPLITANTVLSIL-AVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 314 (964)
Q Consensus 236 ~~lp~VDvfV~T~dp~kEp~~v~~nTvls~l-a~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepr 314 (964)
...|+|+|+||++| |. .++.+||.|++ ++||| ++.|+|.||+.++-|.+.+.|.
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l------------------- 117 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRL------------------- 117 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHH-------------------
Confidence 34899999999999 97 78999999965 79996 6999999999887554432221
Q ss_pred CchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecC
Q 002117 315 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 394 (964)
Q Consensus 315 aPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~ 394 (964)
. +.||+
T Consensus 118 ------------------------------------------~------------------------~~~p~-------- 123 (504)
T PRK14716 118 ------------------------------------------A------------------------ARYPR-------- 123 (504)
T ss_pred ------------------------------------------H------------------------HHCCC--------
Confidence 0 01232
Q ss_pred CCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhc--cccCC---CEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002117 395 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSA--VISNA---PYLLNVDCDHYINNSKALREAMCFMMDP 469 (964)
Q Consensus 395 ~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSa--v~tn~---p~Il~lD~D~~~~~~~~Lr~amcff~Dp 469 (964)
+..+. .+++| .+.||+|||.+++... -...| ++|+++|||.+ ++|++|+.....+.|
T Consensus 124 -------------v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~-v~Pd~Lr~~~~~~~~- 185 (504)
T PRK14716 124 -------------VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDV-IHPLELRLYNYLLPR- 185 (504)
T ss_pred -------------eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCC-cCccHHHHHHhhcCC-
Confidence 22111 12222 3589999999987421 01234 99999999997 799999976555433
Q ss_pred CCCcceEEEecCeeecCCCcccc----cccchhhhhhhcccccccCCCcc-cccccchhhhhhhcCCCCCCCCCCCCCcC
Q 002117 470 TSGKKICYVQFPQRFDGIDRHDR----YSNRNVVFFDINMKGLDGIQGPI-YVGTGCVFRRQALYGYDAPVKKKPPRKTC 544 (964)
Q Consensus 470 ~~g~~v~~VQ~PQ~F~n~d~~d~----~~n~~~vffdi~~~gldg~qgp~-y~GTg~v~RR~ALyG~~p~~~~~~~~~~~ 544 (964)
.++||.|....+.+.+.. |..+....+...++.++.+++++ .+|+|++|||++|--+
T Consensus 186 -----~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l------------- 247 (504)
T PRK14716 186 -----HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERL------------- 247 (504)
T ss_pred -----CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHH-------------
Confidence 458999988765443322 22122222333455667777764 6789999998888200
Q ss_pred CCCCCccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCC
Q 002117 545 NCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGV 624 (964)
Q Consensus 545 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~ 624 (964)
..+.||.
T Consensus 248 -------------------------------------------------------------------------~~~~GG~ 254 (504)
T PRK14716 248 -------------------------------------------------------------------------AAERGGQ 254 (504)
T ss_pred -------------------------------------------------------------------------HhhcCCC
Confidence 0112331
Q ss_pred CCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCC-------------cccc
Q 002117 625 PTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRP-------------AFKG 691 (964)
Q Consensus 625 ~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~a-------------af~G 691 (964)
+|..+++|||+++|++++.+|||++|++.+.. ++++
T Consensus 255 -------------------------------~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e 303 (504)
T PRK14716 255 -------------------------------PFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATRE 303 (504)
T ss_pred -------------------------------CCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccc
Confidence 25568999999999999999999999975421 2358
Q ss_pred cCCCCHHHHHHHHHHhhcch-hHHHHhhc--cccccccCCCCCcchhhhHhhhhh
Q 002117 692 SAPINLSDRLHQVLRWALGS-VEILLSRH--CPIWYGYGCGLKPLERFSYINSVV 743 (964)
Q Consensus 692 ~aP~sl~~~l~QR~RWa~G~-lQil~~k~--~Pl~~g~~~~Ls~~QRl~Yl~~~l 743 (964)
++|+|++++++||.||+.|. +|...+.- .++. .+-+.|++|...+..++
T Consensus 304 ~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~---~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 304 FFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA---TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred cCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh---hhhhHHHHHHHHHHHHH
Confidence 89999999999999999995 78874321 1111 23466778887665444
No 20
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.93 E-value=2.3e-25 Score=230.14 Aligned_cols=229 Identities=36% Similarity=0.597 Sum_probs=175.2
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|.|.|+||++| |++..+..++.|+++.+||.+++.++|+|||.++-|.+-+
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~-------------------------- 51 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALA-------------------------- 51 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHH--------------------------
Confidence 67999999999 8888999999999999999998999999999876322210
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
+++.. ++
T Consensus 52 -----------------------------------~~~~~-----------------------~~--------------- 58 (234)
T cd06421 52 -----------------------------------AELGV-----------------------EY--------------- 58 (234)
T ss_pred -----------------------------------HHhhc-----------------------cc---------------
Confidence 00000 00
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC-CCCCcceEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD-PTSGKKICY 477 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~D-p~~g~~v~~ 477 (964)
++.|+.+++ +.+.|+||+|.+++ ..+++||+++|+|.+ .+|++|.+.+..+.+ | +++.
T Consensus 59 --------~~~~~~~~~----~~~~~~~~~n~~~~----~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~----~~~~ 117 (234)
T cd06421 59 --------GYRYLTRPD----NRHAKAGNLNNALA----HTTGDFVAILDADHV-PTPDFLRRTLGYFLDDP----KVAL 117 (234)
T ss_pred --------CceEEEeCC----CCCCcHHHHHHHHH----hCCCCEEEEEccccC-cCccHHHHHHHHHhcCC----CeEE
Confidence 245666655 56789999999999 468999999999997 689999999998876 6 7999
Q ss_pred EecCeeecCCCccc----ccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccc
Q 002117 478 VQFPQRFDGIDRHD----RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCC 553 (964)
Q Consensus 478 VQ~PQ~F~n~d~~d----~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~ 553 (964)
||+++.+.+.+..+ .+......|+.....+...+....+.|++.++||+++
T Consensus 118 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~------------------------- 172 (234)
T cd06421 118 VQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREAL------------------------- 172 (234)
T ss_pred EecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHH-------------------------
Confidence 99999998776542 2233334444444444444445556666666666555
Q ss_pred ccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhH
Q 002117 554 CCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASL 633 (964)
Q Consensus 554 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~ 633 (964)
+++||++.
T Consensus 173 -----------------------------------------------------------------~~ig~~~~------- 180 (234)
T cd06421 173 -----------------------------------------------------------------DEIGGFPT------- 180 (234)
T ss_pred -----------------------------------------------------------------HHhCCCCc-------
Confidence 45676653
Q ss_pred HHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhH
Q 002117 634 LNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 713 (964)
Q Consensus 634 l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQ 713 (964)
..+.||++++++++.+||+++|++... +++..|.++.++++||.||.+|++|
T Consensus 181 --------------------------~~~~eD~~l~~r~~~~g~~i~~~~~~~--~~~~~~~~~~~~~~q~~rw~~~~~~ 232 (234)
T cd06421 181 --------------------------DSVTEDLATSLRLHAKGWRSVYVPEPL--AAGLAPETLAAYIKQRLRWARGMLQ 232 (234)
T ss_pred --------------------------cceeccHHHHHHHHHcCceEEEecCcc--ccccCCccHHHHHHHHHHHhcCCee
Confidence 356899999999999999999997654 3899999999999999999999998
Q ss_pred HH
Q 002117 714 IL 715 (964)
Q Consensus 714 il 715 (964)
++
T Consensus 233 ~~ 234 (234)
T cd06421 233 IL 234 (234)
T ss_pred eC
Confidence 64
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=1.4e-24 Score=262.43 Aligned_cols=170 Identities=21% Similarity=0.315 Sum_probs=123.0
Q ss_pred CCchhhhHHHHHhhccc---cCC--CEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcccc----
Q 002117 422 HKKAGAMNALIRVSAVI---SNA--PYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDR---- 492 (964)
Q Consensus 422 h~KAGaLN~llrvSav~---tn~--p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d~---- 492 (964)
+.||+|||.++....-. +.+ +.++++|||.+ ++|++|+ .+.++.++ + ++||.|..-.+...+..
T Consensus 132 ~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~-v~pd~L~-~~~~l~~~----~-~~VQ~p~~p~~~~~~~~~~~~ 204 (727)
T PRK11234 132 TSKADCLNNVLDAITQFERSANFAFAGFILHDAEDV-ISPMELR-LFNYLVER----K-DLIQIPVYPFEREWTHFTSGT 204 (727)
T ss_pred CCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCC-CChhHHH-HHHhhcCC----C-CeEeecccCCCccHHHHHHHH
Confidence 48999999999853111 133 46888999996 7999998 67788887 4 79999966333222221
Q ss_pred cccchhhhhhhcccccccCCCc-ccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCccCC
Q 002117 493 YSNRNVVFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNK 571 (964)
Q Consensus 493 ~~n~~~vffdi~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 571 (964)
|..+....+...+++++.++|+ .+.|+|++|.|+++
T Consensus 205 ~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l------------------------------------------- 241 (727)
T PRK11234 205 YIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAV------------------------------------------- 241 (727)
T ss_pred HHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccH-------------------------------------------
Confidence 2233333445667788888766 46688888844433
Q ss_pred cchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhC-CCCCCCchhhHHHHHHHhhccccccccc
Q 002117 572 DTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAG-GVPTGASTASLLNEAIHVISCGYEDKTD 650 (964)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~G-G~~~~~~~~~~l~eA~~v~sc~YE~~T~ 650 (964)
+++.+.| |+
T Consensus 242 --------------------------------------------~al~~~ggg~-------------------------- 251 (727)
T PRK11234 242 --------------------------------------------TALLEDGDGI-------------------------- 251 (727)
T ss_pred --------------------------------------------HHHHHhcCCC--------------------------
Confidence 1223444 32
Q ss_pred cccccccccccccchHHHHHHHHHCCCEEEEeCCCC---------------------CcccccCCCCHHHHHHHHHHhhc
Q 002117 651 WGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR---------------------PAFKGSAPINLSDRLHQVLRWAL 709 (964)
Q Consensus 651 wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~---------------------aaf~G~aP~sl~~~l~QR~RWa~ 709 (964)
+|..+++|||+++|++|+.+||+++|++.+. .++++..|+|+++.++||.||.+
T Consensus 252 -----~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~ 326 (727)
T PRK11234 252 -----AFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWII 326 (727)
T ss_pred -----CcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHc
Confidence 5778999999999999999999999997221 34678899999999999999999
Q ss_pred c-hhHHHH
Q 002117 710 G-SVEILL 716 (964)
Q Consensus 710 G-~lQil~ 716 (964)
| .+|.+.
T Consensus 327 G~~~q~~~ 334 (727)
T PRK11234 327 GIVFQGFK 334 (727)
T ss_pred ccHHHHHH
Confidence 9 688874
No 22
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.93 E-value=1.3e-24 Score=226.79 Aligned_cols=228 Identities=22% Similarity=0.316 Sum_probs=161.4
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|.|.|+||+|| |. ..+..++.|+++++||.+++.|+|.|| +++-|++.+.+.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~----------------------- 52 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREI----------------------- 52 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHH-----------------------
Confidence 67999999999 86 678999999999999999999999998 666444433221
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
..+++.
T Consensus 53 ---------------------------~~~~~~----------------------------------------------- 58 (232)
T cd06437 53 ---------------------------VEEYAA----------------------------------------------- 58 (232)
T ss_pred ---------------------------HHHHhh-----------------------------------------------
Confidence 000000
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 478 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V 478 (964)
.-+++.++.+.+++ ++|++|+|.+++ .++++||+++|+|.+ ++|++|++...++.|| ++++|
T Consensus 59 -----~~~~i~~~~~~~~~----G~k~~a~n~g~~----~a~~~~i~~~DaD~~-~~~~~l~~~~~~~~~~----~v~~v 120 (232)
T cd06437 59 -----QGVNIKHVRRADRT----GYKAGALAEGMK----VAKGEYVAIFDADFV-PPPDFLQKTPPYFADP----KLGFV 120 (232)
T ss_pred -----cCCceEEEECCCCC----CCchHHHHHHHH----hCCCCEEEEEcCCCC-CChHHHHHhhhhhcCC----CeEEE
Confidence 00247778777644 469999999999 579999999999997 6999999977788888 79999
Q ss_pred ecCeeecCCCccc--cccc-chhhhhhhcccccccCCCc-ccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccc
Q 002117 479 QFPQRFDGIDRHD--RYSN-RNVVFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCC 554 (964)
Q Consensus 479 Q~PQ~F~n~d~~d--~~~n-~~~vffdi~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c 554 (964)
|.+..+.|.+.+- ++.. ....++.....+....... ..+|+++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------------------------------- 167 (232)
T cd06437 121 QTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAG--------------------------------- 167 (232)
T ss_pred ecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchh---------------------------------
Confidence 9987766543321 1100 0111222222222111111 1233333
Q ss_pred cccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHH
Q 002117 555 CRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLL 634 (964)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l 634 (964)
.|++++++++||+++
T Consensus 168 ---------------------------------------------------------~~rr~~~~~vgg~~~-------- 182 (232)
T cd06437 168 ---------------------------------------------------------VWRKECIEDAGGWNH-------- 182 (232)
T ss_pred ---------------------------------------------------------hhhHHHHHHhCCCCC--------
Confidence 445555567787754
Q ss_pred HHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcch
Q 002117 635 NEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 711 (964)
Q Consensus 635 ~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~ 711 (964)
.++.||++++++++.+||+++|++.. .++...|+|+.++++||+||++|.
T Consensus 183 -------------------------~~~~ED~~l~~rl~~~G~~~~~~~~~--~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 183 -------------------------DTLTEDLDLSYRAQLKGWKFVYLDDV--VVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred -------------------------CcchhhHHHHHHHHHCCCeEEEeccc--eeeeeCCcCHHHHHHHHHHhccCC
Confidence 35789999999999999999999653 348999999999999999999984
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.91 E-value=4.1e-23 Score=215.06 Aligned_cols=173 Identities=28% Similarity=0.409 Sum_probs=120.1
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCC
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGI 487 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~ 487 (964)
+.++..++ +.+.|+||+|.+++... .+++||+++|+|.. ..|++|.+.+.+|.+| +++.||+++.+.+.
T Consensus 58 i~~i~~~~----~~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~ 126 (236)
T cd06435 58 FRFFHVEP----LPGAKAGALNYALERTA--PDAEIIAVIDADYQ-VEPDWLKRLVPIFDDP----RVGFVQAPQDYRDG 126 (236)
T ss_pred EEEEEcCC----CCCCchHHHHHHHHhcC--CCCCEEEEEcCCCC-cCHHHHHHHHHHhcCC----CeeEEecCccccCC
Confidence 55666655 34579999999999532 46899999999986 7899999999998877 79999998765432
Q ss_pred Cccccccc----chhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccccc
Q 002117 488 DRHDRYSN----RNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKK 563 (964)
Q Consensus 488 d~~d~~~n----~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 563 (964)
.. ..+.- ....+|...++.....+..+..|++++
T Consensus 127 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------------------------------------- 164 (236)
T cd06435 127 EE-SLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCL----------------------------------------- 164 (236)
T ss_pred Cc-cHHHHHHhHHHHHHHHHHhccccccCceEEecceEE-----------------------------------------
Confidence 11 11100 000111111111111112222333333
Q ss_pred ccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhcc
Q 002117 564 GKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISC 643 (964)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc 643 (964)
++++++.++||+++
T Consensus 165 -------------------------------------------------~rr~~~~~iGgf~~----------------- 178 (236)
T cd06435 165 -------------------------------------------------IRRSALDDVGGWDE----------------- 178 (236)
T ss_pred -------------------------------------------------EEHHHHHHhCCCCC-----------------
Confidence 44455567787754
Q ss_pred ccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHHh
Q 002117 644 GYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLS 717 (964)
Q Consensus 644 ~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~~ 717 (964)
....||++++++++.+||++.|++... .+...|+++.++++||+||++|++|++.+
T Consensus 179 ----------------~~~~eD~dl~~r~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 179 ----------------WCITEDSELGLRMHEAGYIGVYVAQSY--GHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred ----------------ccccchHHHHHHHHHCCcEEEEcchhh--ccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 356899999999999999999997543 38999999999999999999999999964
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.91 E-value=4.1e-23 Score=217.61 Aligned_cols=232 Identities=23% Similarity=0.311 Sum_probs=163.2
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|.|.|+||++| |+ ..+..|+.|+++++||.+++.+.|.|||.++-|.+-+.+
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~------------------------ 52 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA------------------------ 52 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH------------------------
Confidence 68999999999 87 788999999999999988999999999988744331110
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
|.. +.
T Consensus 53 ---------------------------~~~---------------~~--------------------------------- 57 (241)
T cd06427 53 ---------------------------LRL---------------PS--------------------------------- 57 (241)
T ss_pred ---------------------------hcc---------------CC---------------------------------
Confidence 000 00
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 478 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V 478 (964)
-.+++++.+.+ ...|++|+|++++ .++|+||+.+|+|.. ..|++|.+++.+|.+. ..++++|
T Consensus 58 ------~~~i~~~~~~~-----~~G~~~a~n~g~~----~a~gd~i~~~DaD~~-~~~~~l~~~~~~~~~~--~~~v~~~ 119 (241)
T cd06427 58 ------IFRVVVVPPSQ-----PRTKPKACNYALA----FARGEYVVIYDAEDA-PDPDQLKKAVAAFARL--DDKLACV 119 (241)
T ss_pred ------CeeEEEecCCC-----CCchHHHHHHHHH----hcCCCEEEEEcCCCC-CChHHHHHHHHHHHhc--CCCEEEE
Confidence 01234443322 2479999999999 579999999999997 6899999999988621 1289999
Q ss_pred ecCeeecCCCccc--c-cccchhhhhhhcccccccCCCcc-cccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccc
Q 002117 479 QFPQRFDGIDRHD--R-YSNRNVVFFDINMKGLDGIQGPI-YVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCC 554 (964)
Q Consensus 479 Q~PQ~F~n~d~~d--~-~~n~~~vffdi~~~gldg~qgp~-y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c 554 (964)
|.+..+++...+- + +..+...+|+..+++....+.+. +.|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------------------------------- 165 (241)
T cd06427 120 QAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTS---------------------------------- 165 (241)
T ss_pred eCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCch----------------------------------
Confidence 9998887643220 0 01111112222333332222221 12333
Q ss_pred cccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHH
Q 002117 555 CRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLL 634 (964)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l 634 (964)
..|++++++++||+.+
T Consensus 166 --------------------------------------------------------~~~rr~~~~~vgg~~~-------- 181 (241)
T cd06427 166 --------------------------------------------------------NHFRTDVLRELGGWDP-------- 181 (241)
T ss_pred --------------------------------------------------------HHhhHHHHHHcCCCCc--------
Confidence 3455556667787643
Q ss_pred HHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHH
Q 002117 635 NEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 714 (964)
Q Consensus 635 ~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQi 714 (964)
...+||++++++++.+|||+.|++. . ++...|+|++++++||.||+.|.+|+
T Consensus 182 -------------------------~~~~eD~~l~~rl~~~G~r~~~~~~-~--~~~~~~~~~~~~~~q~~Rw~~g~~~~ 233 (241)
T cd06427 182 -------------------------FNVTEDADLGLRLARAGYRTGVLNS-T--TLEEANNALGNWIRQRSRWIKGYMQT 233 (241)
T ss_pred -------------------------ccchhhHHHHHHHHHCCceEEEecc-c--ccccCcHhHHHHHHHHHHHhccHHHH
Confidence 3568999999999999999999953 2 37899999999999999999999999
Q ss_pred HHh
Q 002117 715 LLS 717 (964)
Q Consensus 715 l~~ 717 (964)
+..
T Consensus 234 ~~~ 236 (241)
T cd06427 234 WLV 236 (241)
T ss_pred HHH
Confidence 964
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.88 E-value=1.9e-23 Score=216.04 Aligned_cols=224 Identities=28% Similarity=0.427 Sum_probs=135.6
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|.|.|+||++| |+ ..+..|+.|+++++|| ++.++|+||+.++-|.+.+.
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~------------------------- 49 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILR------------------------- 49 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHH-------------------------
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHH-------------------------
Confidence 78999999998 76 4999999999999995 49999999998763221110
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
++++. +|+
T Consensus 50 ------------------------------------~~~~~------------------------~~~------------ 57 (228)
T PF13641_consen 50 ------------------------------------ALAAR------------------------YPR------------ 57 (228)
T ss_dssp ------------------------------------HHHHT------------------------TGG------------
T ss_pred ------------------------------------HHHHH------------------------cCC------------
Confidence 11100 000
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 478 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V 478 (964)
-++.++.+.+++| ...|++|+|.+++. ..+++|+++|+|.+ ++|++|++++.+|.|| +++.|
T Consensus 58 -------~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~-~~p~~l~~~~~~~~~~----~~~~v 119 (228)
T PF13641_consen 58 -------VRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTV-LDPDWLERLLAAFADP----GVGAV 119 (228)
T ss_dssp --------GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEE-E-CHHHHHHHHHHHBS----S--EE
T ss_pred -------CceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcE-ECHHHHHHHHHHHHhC----CCCeE
Confidence 0256777665221 23699999999994 67999999999997 6999999999988888 89999
Q ss_pred ecCeeecCCCcccccccchhhhhhh----cccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccc
Q 002117 479 QFPQRFDGIDRHDRYSNRNVVFFDI----NMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCC 554 (964)
Q Consensus 479 Q~PQ~F~n~d~~d~~~n~~~vffdi----~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c 554 (964)
|++..+++ +.+ .+..-...++.. ...+....+.+++.|++++|||+++
T Consensus 120 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~-------------------------- 171 (228)
T PF13641_consen 120 GGPVFPDN-DRN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSAL-------------------------- 171 (228)
T ss_dssp EEEEEETT-CCC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHH--------------------------
T ss_pred eeeEeecC-CCC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHH--------------------------
Confidence 98887665 322 122222222211 1233344444556777777777666
Q ss_pred cccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHH
Q 002117 555 CRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLL 634 (964)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l 634 (964)
+++||+.+
T Consensus 172 ----------------------------------------------------------------~~~g~fd~-------- 179 (228)
T PF13641_consen 172 ----------------------------------------------------------------EEVGGFDP-------- 179 (228)
T ss_dssp ----------------------------------------------------------------HHH-S--S--------
T ss_pred ----------------------------------------------------------------HHhCCCCC--------
Confidence 35566543
Q ss_pred HHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcc
Q 002117 635 NEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 710 (964)
Q Consensus 635 ~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G 710 (964)
....||+++++++..+||+++|++.. .++...|.+++++++||.||+.|
T Consensus 180 -------------------------~~~~eD~~l~~r~~~~G~~~~~~~~~--~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 180 -------------------------FILGEDFDLCLRLRAAGWRIVYAPDA--LVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -------------------------SSSSHHHHHHHHHHHTT--EEEEEEE--EEEE--SSSTHHHHHHHHHHH--
T ss_pred -------------------------CCcccHHHHHHHHHHCCCcEEEECCc--EEEEeCCCCHHHHHHHHhccCcC
Confidence 46779999999999999999999643 35899999999999999999987
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.85 E-value=2.4e-19 Score=215.40 Aligned_cols=172 Identities=19% Similarity=0.255 Sum_probs=124.8
Q ss_pred CCCchhhhHHHHHhh---ccccCCCE--EEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCee-ecCCCcc---c
Q 002117 421 HHKKAGAMNALIRVS---AVISNAPY--LLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQR-FDGIDRH---D 491 (964)
Q Consensus 421 hh~KAGaLN~llrvS---av~tn~p~--Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~-F~n~d~~---d 491 (964)
...||.|||.++... .-.+.++| |+++|||.+ ++|++|+. |-++.+. + -+||.|-. ..|...+ .
T Consensus 139 p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~-~~P~~L~~-~~~~~~~----~-~~iQ~pV~~~~~~~~~~l~~ 211 (703)
T PRK15489 139 PTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDV-LHPLELKY-FNYLLPR----K-DLVQLPVLSLERKWYEWVAG 211 (703)
T ss_pred CCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCC-CChhHHHH-HHhhcCC----c-ceeeeeeccCCCccccHHHH
Confidence 357999999988742 11234455 999999996 89999985 4666644 1 36998822 1121111 2
Q ss_pred ccccchhhhhhhcccccccCCCccc-ccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCccC
Q 002117 492 RYSNRNVVFFDINMKGLDGIQGPIY-VGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKN 570 (964)
Q Consensus 492 ~~~n~~~vffdi~~~gldg~qgp~y-~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 570 (964)
-|..+....|...++++..+.|++. .|||++|||.||-.
T Consensus 212 ~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~---------------------------------------- 251 (703)
T PRK15489 212 TYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA---------------------------------------- 251 (703)
T ss_pred HHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH----------------------------------------
Confidence 3566777778888999988888875 67899999998820
Q ss_pred CcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhccccccccc
Q 002117 571 KDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTD 650 (964)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~ 650 (964)
+.+.||.
T Consensus 252 -----------------------------------------------l~~~gg~-------------------------- 258 (703)
T PRK15489 252 -----------------------------------------------LMKERGN-------------------------- 258 (703)
T ss_pred -----------------------------------------------HHHhcCC--------------------------
Confidence 1122332
Q ss_pred cccccccccccccchHHHHHHHHHCCCEEEEeCC---------------------CCCcccccCCCCHHHHHHHHHHhhc
Q 002117 651 WGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIP---------------------KRPAFKGSAPINLSDRLHQVLRWAL 709 (964)
Q Consensus 651 wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p---------------------~~aaf~G~aP~sl~~~l~QR~RWa~ 709 (964)
.+|+.+++|||+++|+||+++|||+.|+.- ...+..+..|.++++.++||.||..
T Consensus 259 ----~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~ 334 (703)
T PRK15489 259 ----QPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVL 334 (703)
T ss_pred ----CCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHh
Confidence 157788999999999999999999999322 1245578999999999999999999
Q ss_pred chh-HHHH
Q 002117 710 GSV-EILL 716 (964)
Q Consensus 710 G~l-Qil~ 716 (964)
|-. |...
T Consensus 335 Gi~~q~~~ 342 (703)
T PRK15489 335 GIAFQGWE 342 (703)
T ss_pred HHHHhhHH
Confidence 987 7753
No 27
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.85 E-value=7.1e-20 Score=206.91 Aligned_cols=235 Identities=16% Similarity=0.212 Sum_probs=154.5
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCC
Q 002117 236 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRA 315 (964)
Q Consensus 236 ~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepra 315 (964)
...|+|.|+||++| |++ .+.+++.|++++|||. +.++|.||+.++-|.+.+.
T Consensus 38 ~~~p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~---------------------- 89 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVR---------------------- 89 (373)
T ss_pred CCCCCeEEEEECCC---CCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHH----------------------
Confidence 34899999999999 885 5679999999999996 7899999988763322111
Q ss_pred chhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCC
Q 002117 316 PEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQN 395 (964)
Q Consensus 316 Pe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~ 395 (964)
++ .+ +||.
T Consensus 90 --------------------------------~~-------~~------------------------~~p~--------- 97 (373)
T TIGR03472 90 --------------------------------RL-------RA------------------------DFPD--------- 97 (373)
T ss_pred --------------------------------HH-------HH------------------------hCCC---------
Confidence 01 00 0111
Q ss_pred CcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcce
Q 002117 396 GVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKI 475 (964)
Q Consensus 396 g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v 475 (964)
.++.++.+.++. ..+.|++|+|++++ .+.+|+|+++|+|.+ +.|++|++.+..|.|| ++
T Consensus 98 ----------~~i~~v~~~~~~--G~~~K~~~l~~~~~----~a~ge~i~~~DaD~~-~~p~~L~~lv~~~~~~----~v 156 (373)
T TIGR03472 98 ----------ADIDLVIDARRH--GPNRKVSNLINMLP----HARHDILVIADSDIS-VGPDYLRQVVAPLADP----DV 156 (373)
T ss_pred ----------CceEEEECCCCC--CCChHHHHHHHHHH----hccCCEEEEECCCCC-cChhHHHHHHHHhcCC----Cc
Confidence 125556444322 24579999999888 579999999999986 6999999999999898 78
Q ss_pred EEEecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccccc
Q 002117 476 CYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCC 555 (964)
Q Consensus 476 ~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~ 555 (964)
+.|+.+.... +... +.++.... ..+.. ++-+. ... ...|.
T Consensus 157 ~~V~~~~~~~--~~~~-~~~~l~~~------~~~~~---~~~~~--~~~--~~~~~------------------------ 196 (373)
T TIGR03472 157 GLVTCLYRGR--PVPG-FWSRLGAM------GINHN---FLPSV--MVA--RALGR------------------------ 196 (373)
T ss_pred ceEeccccCC--CCCC-HHHHHHHH------Hhhhh---hhHHH--HHH--HhccC------------------------
Confidence 9999864322 1111 11110000 00000 00000 000 00000
Q ss_pred ccccccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHH
Q 002117 556 RSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLN 635 (964)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~ 635 (964)
...-.|++-.|++++++++||+..
T Consensus 197 -----------------------------------------------~~~~~G~~~a~RR~~l~~iGGf~~--------- 220 (373)
T TIGR03472 197 -----------------------------------------------ARFCFGATMALRRATLEAIGGLAA--------- 220 (373)
T ss_pred -----------------------------------------------CccccChhhheeHHHHHHcCChHH---------
Confidence 000135555677778888998853
Q ss_pred HHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcch
Q 002117 636 EAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 711 (964)
Q Consensus 636 eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~ 711 (964)
..++++||++++.++..+||++.|++.. ......|+|++++++||.||++..
T Consensus 221 ----------------------~~~~~~ED~~l~~~i~~~G~~v~~~~~~--v~~~~~~~s~~~~~~q~~RW~r~~ 272 (373)
T TIGR03472 221 ----------------------LAHHLADDYWLGELVRALGLRVVLAPVV--VDTDVHETSFATLLAHELRWSRTI 272 (373)
T ss_pred ----------------------hcccchHHHHHHHHHHHcCCeEEecchh--hhcCCCccCHHHHHHHHHHHHhhh
Confidence 0146789999999999999999998643 336788899999999999997443
No 28
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.84 E-value=4.1e-21 Score=204.18 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=46.8
Q ss_pred ccccchHHHHHHHHHCCCEEEE--eCCCCCcccccCCCCHHHHHHHHHHhhcchhH
Q 002117 660 GSVTEDILTGFKMHCHGWRSVY--CIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 713 (964)
Q Consensus 660 ~sITED~~tglrL~~~GwrsvY--~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQ 713 (964)
.+++||.+++++|..+||++.| ++.. .++.++|+|++++++||+||++|++.
T Consensus 190 ~~~~ED~~l~~~l~~~G~~~~~~~~~~a--~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 190 LDLGEDRILCTLLLKAGPKRKYLYVPGA--VAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HhHhcccceeHHHhccCCccEEEEeccc--EEEEECCCCHHHHHHHhHhhhccccc
Confidence 4789999999999999999999 7654 44899999999999999999999864
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.82 E-value=1.2e-19 Score=186.17 Aligned_cols=226 Identities=16% Similarity=0.197 Sum_probs=152.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhhhhh
Q 002117 243 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQ 322 (964)
Q Consensus 243 vfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~YFs~ 322 (964)
|+|||+| |+ ..+.+||.|++.++||.+++.|+|.|||.++-|.+.+.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~----------------------------- 47 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE----------------------------- 47 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-----------------------------
Confidence 6899998 76 78999999999999999899999999998763322110
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcccccC
Q 002117 323 KLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEG 402 (964)
Q Consensus 323 ~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d~~g 402 (964)
|.. + +
T Consensus 48 -----------------------~~~----------~------------------------~------------------ 52 (229)
T cd04192 48 -----------------------FAA----------A------------------------K------------------ 52 (229)
T ss_pred -----------------------HHH----------h------------------------C------------------
Confidence 000 0 0
Q ss_pred CCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCe
Q 002117 403 NLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQ 482 (964)
Q Consensus 403 ~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ 482 (964)
..+++.++.++. + ....|+.++|.++. .++++||+++|+|.+ +.|++|++.+..+.++ ..+.|+.++
T Consensus 53 -~~~~v~~~~~~~-~--~~~g~~~a~n~g~~----~~~~d~i~~~D~D~~-~~~~~l~~l~~~~~~~----~~~~v~~~~ 119 (229)
T cd04192 53 -PNFQLKILNNSR-V--SISGKKNALTTAIK----AAKGDWIVTTDADCV-VPSNWLLTFVAFIQKE----QIGLVAGPV 119 (229)
T ss_pred -CCcceEEeeccC-c--ccchhHHHHHHHHH----HhcCCEEEEECCCcc-cCHHHHHHHHHHhhcC----CCcEEeeee
Confidence 012355555443 1 34678999999998 578999999999997 6899999999977666 577888888
Q ss_pred eecCCCcc-cccccchhhhhhhcccccccCCCc-ccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002117 483 RFDGIDRH-DRYSNRNVVFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 560 (964)
Q Consensus 483 ~F~n~d~~-d~~~n~~~vffdi~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 560 (964)
.+...+.. ..+......+......+..+++.+ ...|++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------------------------------------- 160 (229)
T cd04192 120 IYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANM--------------------------------------- 160 (229)
T ss_pred eecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceE---------------------------------------
Confidence 87622211 111110000011111111111111 1122222
Q ss_pred cccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHh
Q 002117 561 SKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHV 640 (964)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v 640 (964)
.|+++++.++||+++.
T Consensus 161 ---------------------------------------------------~~rr~~~~~~ggf~~~------------- 176 (229)
T cd04192 161 ---------------------------------------------------AYRKEAFFEVGGFEGN------------- 176 (229)
T ss_pred ---------------------------------------------------EEEHHHHHHhcCCccc-------------
Confidence 3344555677887641
Q ss_pred hccccccccccccccccccccccchHHHHHHHHHCCC-EEEEeCCCCCcccccCCCCHHHHHHHHHHhhcc
Q 002117 641 ISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGW-RSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 710 (964)
Q Consensus 641 ~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~Gw-rsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G 710 (964)
....+||.++.+++.++|| ++.|+..+....+...|.+++++++||+||++|
T Consensus 177 ------------------~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 177 ------------------DHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred ------------------cccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 2366899999999999999 999986555556899999999999999999987
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.81 E-value=3.4e-19 Score=182.24 Aligned_cols=195 Identities=18% Similarity=0.239 Sum_probs=145.3
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|.|.|+||++| |... +..++-|+++.+||. +.++|.|||++.-|.+.+.+
T Consensus 1 p~vsviip~~n---~~~~-l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~------------------------ 50 (196)
T cd02520 1 PGVSILKPLCG---VDPN-LYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRK------------------------ 50 (196)
T ss_pred CCeEEEEecCC---CCcc-HHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHH------------------------
Confidence 67999999999 7654 689999999999986 89999999998744332111
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
+.+ .||.+
T Consensus 51 -------------------------------------~~~------------------------~~~~~----------- 58 (196)
T cd02520 51 -------------------------------------LIA------------------------KYPNV----------- 58 (196)
T ss_pred -------------------------------------HHH------------------------HCCCC-----------
Confidence 000 01000
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 478 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V 478 (964)
++.|+..+++.| ...|++|+|.+++ .++++|++++|+|.. ..|++|++.+..+.|| +++.|
T Consensus 59 --------~~~~~~~~~~~g--~~~~~~~~n~g~~----~a~~d~i~~~D~D~~-~~~~~l~~l~~~~~~~----~~~~v 119 (196)
T cd02520 59 --------DARLLIGGEKVG--INPKVNNLIKGYE----EARYDILVISDSDIS-VPPDYLRRMVAPLMDP----GVGLV 119 (196)
T ss_pred --------cEEEEecCCcCC--CCHhHHHHHHHHH----hCCCCEEEEECCCce-EChhHHHHHHHHhhCC----CCCeE
Confidence 133444433222 2368999999999 578999999999996 6899999999988888 67788
Q ss_pred ecCeeecCCCcccccccchhhhhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccc
Q 002117 479 QFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSR 558 (964)
Q Consensus 479 Q~PQ~F~n~d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~ 558 (964)
+.. ...|+++++||+++
T Consensus 120 ~~~---------------------------------~~~g~~~~~r~~~~------------------------------ 136 (196)
T cd02520 120 TCL---------------------------------CAFGKSMALRREVL------------------------------ 136 (196)
T ss_pred Eee---------------------------------cccCceeeeEHHHH------------------------------
Confidence 765 35577788887776
Q ss_pred cccccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHH
Q 002117 559 KKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAI 638 (964)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~ 638 (964)
+++||++.
T Consensus 137 ------------------------------------------------------------~~~ggf~~------------ 144 (196)
T cd02520 137 ------------------------------------------------------------DAIGGFEA------------ 144 (196)
T ss_pred ------------------------------------------------------------HhccChHH------------
Confidence 23455531
Q ss_pred HhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcc
Q 002117 639 HVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 710 (964)
Q Consensus 639 ~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G 710 (964)
....+.||+++++++..+||++.|++.. .++...|.+++++++||.||++.
T Consensus 145 -------------------~~~~~~eD~~l~~rl~~~G~~i~~~~~~--~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 145 -------------------FADYLAEDYFLGKLIWRLGYRVVLSPYV--VMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -------------------HhHHHHHHHHHHHHHHHcCCeEEEcchh--eeccCCcccHHHHHHHHHHHhcc
Confidence 0124689999999999999999999653 34899999999999999999863
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.77 E-value=6.5e-18 Score=175.35 Aligned_cols=59 Identities=27% Similarity=0.199 Sum_probs=52.1
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCC
Q 002117 421 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGID 488 (964)
Q Consensus 421 hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d 488 (964)
+..|++|+|.+++ .+.++||+++|+|.+ +.|++|++++..|.|| +++.|+..+.+.+.+
T Consensus 62 ~~g~~~a~n~g~~----~a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~ 120 (235)
T cd06434 62 HPGKRRALAEGIR----HVTTDIVVLLDSDTV-WPPNALPEMLKPFEDP----KVGGVGTNQRILRPR 120 (235)
T ss_pred CCChHHHHHHHHH----HhCCCEEEEECCCce-eChhHHHHHHHhccCC----CEeEEcCceEeecCc
Confidence 3469999999998 468999999999997 7899999999988888 899999999887764
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.77 E-value=1.4e-17 Score=175.07 Aligned_cols=127 Identities=23% Similarity=0.323 Sum_probs=97.9
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCC
Q 002117 235 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 314 (964)
Q Consensus 235 ~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepr 314 (964)
.+..|.|.|+|||+| |+ ..+..++.|+++++||.+++.++|+|||+++-|.+.+
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~---------------------- 78 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIA---------------------- 78 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHH----------------------
Confidence 467899999999999 76 6789999999999999888999999999987332211
Q ss_pred CchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecC
Q 002117 315 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 394 (964)
Q Consensus 315 aPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~ 394 (964)
+++.+
T Consensus 79 -----------------------------~~~~~---------------------------------------------- 83 (251)
T cd06439 79 -----------------------------REYAD---------------------------------------------- 83 (251)
T ss_pred -----------------------------HHHhh----------------------------------------------
Confidence 11100
Q ss_pred CCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcc
Q 002117 395 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKK 474 (964)
Q Consensus 395 ~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~ 474 (964)
. ++.++..++ ...|++|+|.+++ .+++++|+++|+|.+ +.+++|++.+..+.++ +
T Consensus 84 ---------~--~v~~i~~~~-----~~g~~~a~n~gi~----~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~----~ 138 (251)
T cd06439 84 ---------K--GVKLLRFPE-----RRGKAAALNRALA----LATGEIVVFTDANAL-LDPDALRLLVRHFADP----S 138 (251)
T ss_pred ---------C--cEEEEEcCC-----CCChHHHHHHHHH----HcCCCEEEEEccccC-cCHHHHHHHHHHhcCC----C
Confidence 0 134444443 2469999999999 467899999999997 5799999999998777 7
Q ss_pred eEEEecCeeecCC
Q 002117 475 ICYVQFPQRFDGI 487 (964)
Q Consensus 475 v~~VQ~PQ~F~n~ 487 (964)
++.|+......+.
T Consensus 139 ~~~v~~~~~~~~~ 151 (251)
T cd06439 139 VGAVSGELVIVDG 151 (251)
T ss_pred ccEEEeEEEecCC
Confidence 8899987766543
No 33
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=2e-15 Score=171.30 Aligned_cols=211 Identities=22% Similarity=0.338 Sum_probs=155.5
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEEecCeeec
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYVQFPQRFD 485 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff-~Dp~~g~~v~~VQ~PQ~F~ 485 (964)
++.|-.|.+ |-..||||+....|.-| +..+|++++|||.+ -..+.+-+.+..| .|| +.|.+||--.--
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSv-Mtgd~lvrLv~~ME~~P----~aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSV-MTGDCLVRLVRLMEANP----DAGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccc-cCchHHHHHHHHHhhCC----CCceeecchhhc
Confidence 367766766 67799999999999876 77899999999997 5788888888776 578 799999943333
Q ss_pred CCC-ccccccc-chhhhhhhcccccccCCCc--ccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccc
Q 002117 486 GID-RHDRYSN-RNVVFFDINMKGLDGIQGP--IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKS 561 (964)
Q Consensus 486 n~d-~~d~~~n-~~~vffdi~~~gldg~qgp--~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 561 (964)
|-| -..|..+ ..+++--+.--|+..||+. -|.|.|++.|-+|+-. .||...
T Consensus 282 gg~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~-----------------------hcgLp~-- 336 (736)
T COG2943 282 GGDTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE-----------------------HCGLPP-- 336 (736)
T ss_pred CcchHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH-----------------------hcCCCC--
Confidence 322 1222222 2355556777899999874 7999999999998841 111100
Q ss_pred ccccCCccCCcchhhhhhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhh
Q 002117 562 KKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVI 641 (964)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~ 641 (964)
++| ++.| ||
T Consensus 337 -------------------------LpG--------------~~pF--------------gG------------------ 345 (736)
T COG2943 337 -------------------------LPG--------------RGPF--------------GG------------------ 345 (736)
T ss_pred -------------------------CCC--------------CCCC--------------Cc------------------
Confidence 000 0012 22
Q ss_pred ccccccccccccccccccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHHhhccc
Q 002117 642 SCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCP 721 (964)
Q Consensus 642 sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~~k~~P 721 (964)
..++.|+.-+-.|.+.||.+... +.+...+++.|.|+-|++++-+|||+|++|.+.
T Consensus 346 ------------------~ilSHDfvEAALmRRaGW~v~ia-~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~r----- 401 (736)
T COG2943 346 ------------------HILSHDFVEAALMRRAGWGVWIA-YDLDGSYEELPPNLLDELKRDRRWCHGNLQHFR----- 401 (736)
T ss_pred ------------------cccchHHHHHHHHhhcCceEEEe-ccCCCchhhCCchHHHHHhhhhHhhhcchhhce-----
Confidence 35788999999999999987766 467778999999999999999999999999873
Q ss_pred cccccCCCCCcchhhhHhhhhhHHhHHHH
Q 002117 722 IWYGYGCGLKPLERFSYINSVVYPITSIP 750 (964)
Q Consensus 722 l~~g~~~~Ls~~QRl~Yl~~~ly~l~sl~ 750 (964)
++ ..++|.+..|+.++.+++.|+++..
T Consensus 402 l~--~~~GlHwvsR~h~~tGVmsYlsaPl 428 (736)
T COG2943 402 LF--LVKGLHWVSRAHFLTGVMSYLSAPL 428 (736)
T ss_pred ee--ccCCccHHHHHHHHHHHHHHHhhHH
Confidence 33 1589999999999988887776533
No 34
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.74 E-value=1.9e-16 Score=179.90 Aligned_cols=133 Identities=22% Similarity=0.195 Sum_probs=93.4
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCC
Q 002117 235 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 314 (964)
Q Consensus 235 ~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepr 314 (964)
++..|+|.|+||++| |. ..+..++-|++++|||. ++.|+|.|||+++-|.+-+.+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~-------------------- 90 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARA-------------------- 90 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHH--------------------
Confidence 467899999999999 86 67889999999999995 489999999998744332111
Q ss_pred CchhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecC
Q 002117 315 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 394 (964)
Q Consensus 315 aPe~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~ 394 (964)
+. + +||.
T Consensus 91 ----------------------------------~~-------~------------------------~~~~-------- 97 (384)
T TIGR03469 91 ----------------------------------AA-------R------------------------AYGR-------- 97 (384)
T ss_pred ----------------------------------HH-------H------------------------hcCC--------
Confidence 00 0 0000
Q ss_pred CCcccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhcccc-CCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCc
Q 002117 395 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVIS-NAPYLLNVDCDHYINNSKALREAMCFMMDPTSGK 473 (964)
Q Consensus 395 ~g~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~t-n~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~ 473 (964)
-+++.++..+.+|. .-..|+.|+|.+++.+.... ++|+|+.+|+|.. ++|+.|++++..+.++
T Consensus 98 ----------~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~-~~p~~l~~lv~~~~~~---- 161 (384)
T TIGR03469 98 ----------GDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTDADIA-HGPDNLARLVARARAE---- 161 (384)
T ss_pred ----------CCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEECCCCC-CChhHHHHHHHHHHhC----
Confidence 01244454333332 34579999999999532111 2899999999997 7899999999988876
Q ss_pred ceEEEecC
Q 002117 474 KICYVQFP 481 (964)
Q Consensus 474 ~v~~VQ~P 481 (964)
++++|...
T Consensus 162 ~~~~vs~~ 169 (384)
T TIGR03469 162 GLDLVSLM 169 (384)
T ss_pred CCCEEEec
Confidence 45566543
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.67 E-value=2.1e-15 Score=156.75 Aligned_cols=54 Identities=15% Similarity=0.106 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHHh
Q 002117 662 VTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLS 717 (964)
Q Consensus 662 ITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~~ 717 (964)
..||.+++++++.+|+++.|++.... ....+.+++.+++|+.||+.|..|.+..
T Consensus 180 ~~eD~~l~~r~~~~G~~~~~~~~~~~--~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 180 RNEDAELNYRLRKAGYKIWLSPDIRV--YYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred ccchhHHHHHHHHcCcEEEEcCCeEE--EEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 46999999999999999999965433 6778899999999999999999999964
No 36
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.64 E-value=1.9e-15 Score=153.63 Aligned_cols=138 Identities=29% Similarity=0.417 Sum_probs=103.5
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcccccccchhhhhhhcc----cccccCC-Ccccc
Q 002117 443 YLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINM----KGLDGIQ-GPIYV 517 (964)
Q Consensus 443 ~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d~~~n~~~vffdi~~----~gldg~q-gp~y~ 517 (964)
+|+++|+|.. +.+++|++++.++.|| +++.||+|+.+++ .++...+.+.++|+... ...+..+ .....
T Consensus 1 ~v~~~DaDt~-~~~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTR-LPPDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCC-CChHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 5899999997 7899999999998888 8999999999863 34555555555553221 1111121 12345
Q ss_pred cccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCccCCcchhhhhhhhhhhhcccccccccccC
Q 002117 518 GTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSL 597 (964)
Q Consensus 518 GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (964)
|+|.++||+|+
T Consensus 74 G~~~~~r~~~l--------------------------------------------------------------------- 84 (193)
T PF13632_consen 74 GSGMLFRREAL--------------------------------------------------------------------- 84 (193)
T ss_pred CcceeeeHHHH---------------------------------------------------------------------
Confidence 66666665555
Q ss_pred chhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCC
Q 002117 598 MPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGW 677 (964)
Q Consensus 598 ~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~Gw 677 (964)
+++||+.. ..+++||+++++++.++||
T Consensus 85 ---------------------~~vg~~~~--------------------------------~~~~~ED~~l~~~l~~~G~ 111 (193)
T PF13632_consen 85 ---------------------REVGGFDD--------------------------------PFSIGEDMDLGFRLRRAGY 111 (193)
T ss_pred ---------------------HHhCcccc--------------------------------cccccchHHHHHHHHHCCC
Confidence 45565430 3689999999999999999
Q ss_pred EEEEeCCCCCcccccCCCCHHHHHHHHHHhhcch
Q 002117 678 RSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 711 (964)
Q Consensus 678 rsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~ 711 (964)
++.|++.. .++.++|.|+.++++||+||..|.
T Consensus 112 ~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 112 RIVYVPDA--IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred EEEEeccc--ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99999754 348999999999999999999998
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.53 E-value=5.1e-14 Score=144.13 Aligned_cols=115 Identities=17% Similarity=0.111 Sum_probs=80.6
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhc-------cccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEe
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSA-------VISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQ 479 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSa-------v~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ 479 (964)
++.++.++.. + .+..|++|+|.+++.+. .-..+++|+++|+|.. +.|++|+++..+|.|| +++.||
T Consensus 51 ~v~~i~~~~~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~-~~~~~l~~~~~~~~~~----~v~~v~ 123 (191)
T cd06436 51 RVHLLRRHLP-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGR-LDPNALEAVAPYFSDP----RVAGTQ 123 (191)
T ss_pred cEEEEeccCC-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCC-cCHhHHHHHHHhhcCC----ceEEEe
Confidence 3666665431 1 23479999999998531 0113489999999997 7999999988888888 799999
Q ss_pred cCeeecCCCccc--cc-ccchhhhhhhcccccccCCCcccccccchhhhhhh
Q 002117 480 FPQRFDGIDRHD--RY-SNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQAL 528 (964)
Q Consensus 480 ~PQ~F~n~d~~d--~~-~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~AL 528 (964)
.+.++.|.+.+- ++ ..+...++.+.+.++...+...+.|+|++|||++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 124 SRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred eeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 999998865431 11 11223333455666655555557899999998888
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.42 E-value=6.6e-13 Score=134.30 Aligned_cols=102 Identities=20% Similarity=0.123 Sum_probs=64.4
Q ss_pred CCCchhhhHHHHHhhc-cccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcccc---cccc
Q 002117 421 HHKKAGAMNALIRVSA-VISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDR---YSNR 496 (964)
Q Consensus 421 hh~KAGaLN~llrvSa-v~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d~---~~n~ 496 (964)
+..|++|+|.+++... .-+++++|+++|+|.. +.|++|++++..|.+. ...||......+.+.+-. +.-.
T Consensus 61 ~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~-~~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~~~~~~~~~~ 134 (183)
T cd06438 61 RRGKGYALDFGFRHLLNLADDPDAVVVFDADNL-VDPNALEELNARFAAG-----ARVVQAYYNSKNPDDSWITRLYAFA 134 (183)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC-CChhHHHHHHHHHhhC-----CCeeEEEEeeeCCccCHHHHHHHHH
Confidence 4579999999998531 1247999999999997 6899999999988653 246888777665433211 1111
Q ss_pred hhhhhhhcccccccCCCc-ccccccchhhhhhh
Q 002117 497 NVVFFDINMKGLDGIQGP-IYVGTGCVFRRQAL 528 (964)
Q Consensus 497 ~~vffdi~~~gldg~qgp-~y~GTg~v~RR~AL 528 (964)
...++.+...++..+.+. ...|+|.+|||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 135 FLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 222223333344444433 45677777777666
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.40 E-value=8.1e-12 Score=126.65 Aligned_cols=122 Identities=19% Similarity=0.248 Sum_probs=88.9
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchh
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 318 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~ 318 (964)
|.|.|+|||+| |....+.+|+.|+++.+||. +.|+|+|||.+.-|.+.+
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~-------------------------- 49 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRV-------------------------- 49 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHH--------------------------
Confidence 67999999998 76678899999999999984 789999999875221111
Q ss_pred hhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcc
Q 002117 319 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 398 (964)
Q Consensus 319 YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~ 398 (964)
.+.|.+ +
T Consensus 50 ------------------------~~~~~~----------~--------------------------------------- 56 (202)
T cd04184 50 ------------------------LKKYAA----------Q--------------------------------------- 56 (202)
T ss_pred ------------------------HHHHHh----------c---------------------------------------
Confidence 111110 0
Q ss_pred cccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEE
Q 002117 399 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICY 477 (964)
Q Consensus 399 d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff-~Dp~~g~~v~~ 477 (964)
-+++.++..+. ...++.|+|.+++ .+.++||+.+|+|.+ +.|++|.+++..+ .+| +++.
T Consensus 57 ------~~~~~~~~~~~-----~~g~~~a~n~g~~----~a~~d~i~~ld~D~~-~~~~~l~~~~~~~~~~~----~~~~ 116 (202)
T cd04184 57 ------DPRIKVVFREE-----NGGISAATNSALE----LATGEFVALLDHDDE-LAPHALYEVVKALNEHP----DADL 116 (202)
T ss_pred ------CCCEEEEEccc-----CCCHHHHHHHHHH----hhcCCEEEEECCCCc-CChHHHHHHHHHHHhCC----CCCE
Confidence 01244444433 3468999999999 468999999999996 7999999999877 677 5677
Q ss_pred EecCeee
Q 002117 478 VQFPQRF 484 (964)
Q Consensus 478 VQ~PQ~F 484 (964)
|+.....
T Consensus 117 v~~~~~~ 123 (202)
T cd04184 117 IYSDEDK 123 (202)
T ss_pred EEccHHh
Confidence 7665443
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.36 E-value=1.7e-11 Score=124.36 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=51.9
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecCeeecC
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFPQRFDG 486 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~-Dp~~g~~v~~VQ~PQ~F~n 486 (964)
+.|+.+++. ..+++|+|.+++ .+.++||+++|+|.+ ..|++|.+++.+|. +| +++.|.......+
T Consensus 57 i~~i~~~~n-----~G~~~a~N~g~~----~a~gd~i~~lD~Dd~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~ 122 (201)
T cd04195 57 LKVVPLEKN-----RGLGKALNEGLK----HCTYDWVARMDTDDI-SLPDRFEKQLDFIEKNP----EIDIVGGGVLEFD 122 (201)
T ss_pred eEEEEcCcc-----ccHHHHHHHHHH----hcCCCEEEEeCCccc-cCcHHHHHHHHHHHhCC----CeEEEcccEEEEC
Confidence 556666542 368999999999 578999999999997 78999999999875 56 6888887765543
No 41
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.27 E-value=1.4e-11 Score=126.26 Aligned_cols=156 Identities=23% Similarity=0.308 Sum_probs=108.3
Q ss_pred CCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcccccccchhh
Q 002117 420 DHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVV 499 (964)
Q Consensus 420 ~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~d~~~n~~~v 499 (964)
.-+.|..||.++++. ....++|+++|+|+. .+|++|++.+.-|.|| +++.|..+.++.+.+.. .+.-...
T Consensus 14 g~N~Kv~nL~~~~~~---~a~~d~~~~~DsDi~-v~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~~~--~~~l~~~ 83 (175)
T PF13506_consen 14 GCNPKVNNLAQGLEA---GAKYDYLVISDSDIR-VPPDYLRELVAPLADP----GVGLVTGLPRGVPARGF--WSRLEAA 83 (175)
T ss_pred CCChHHHHHHHHHHh---hCCCCEEEEECCCee-ECHHHHHHHHHHHhCC----CCcEEEecccccCCcCH--HHHHHHH
Confidence 357899999999993 279999999999998 5899999999999999 79999887665544321 1111111
Q ss_pred hhhhcccccc--cCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCccCCcchhhh
Q 002117 500 FFDINMKGLD--GIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQI 577 (964)
Q Consensus 500 ffdi~~~gld--g~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 577 (964)
|+. ..++.- .-..++.
T Consensus 84 ~~~-~~~~~~~a~~~~~~~------------------------------------------------------------- 101 (175)
T PF13506_consen 84 FFN-FLPGVLQALGGAPFA------------------------------------------------------------- 101 (175)
T ss_pred HHh-HHHHHHHHhcCCCce-------------------------------------------------------------
Confidence 111 001000 0011122
Q ss_pred hhhhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhcccccccccccccccc
Q 002117 578 YALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGW 657 (964)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw 657 (964)
+|.+-.|++++|+++||+..
T Consensus 102 -----------------------------~G~~m~~rr~~L~~~GG~~~------------------------------- 121 (175)
T PF13506_consen 102 -----------------------------WGGSMAFRREALEEIGGFEA------------------------------- 121 (175)
T ss_pred -----------------------------ecceeeeEHHHHHHcccHHH-------------------------------
Confidence 34555666677778888742
Q ss_pred ccccccchHHHHHHHHHCCCEEEEeCCCCCcccccCC----CCHHHHHHHHHHhhc
Q 002117 658 IYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAP----INLSDRLHQVLRWAL 709 (964)
Q Consensus 658 ~~~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP----~sl~~~l~QR~RWa~ 709 (964)
..+.++||+.+|-+++.+|||+++.+.. +.....| .+++++++++.||++
T Consensus 122 l~~~ladD~~l~~~~~~~G~~v~~~~~~--v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 122 LADYLADDYALGRRLRARGYRVVLSPYP--VVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred HhhhhhHHHHHHHHHHHCCCeEEEcchh--eeecccCccccccHHHHHHHHHhhcC
Confidence 1257899999999999999999998632 2245566 489999999999985
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.19 E-value=4.3e-10 Score=112.45 Aligned_cols=56 Identities=18% Similarity=0.084 Sum_probs=44.3
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH-hhcCCCCCcceEEEecCeeecC
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC-FMMDPTSGKKICYVQFPQRFDG 486 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amc-ff~Dp~~g~~v~~VQ~PQ~F~n 486 (964)
..+++|+|.+++ .++++||+++|+|.. ..++.+.+.+. +..++ ++.+|.....+.+
T Consensus 61 ~g~~~a~n~~~~----~a~~~~v~~ld~D~~-~~~~~~~~~~~~~~~~~----~~~~v~g~~~~~~ 117 (202)
T cd06433 61 KGIYDAMNKGIA----LATGDIIGFLNSDDT-LLPGALLAVVAAFAEHP----EVDVVYGDVLLVD 117 (202)
T ss_pred cCHHHHHHHHHH----HcCCCEEEEeCCCcc-cCchHHHHHHHHHHhCC----CccEEEeeeEEEc
Confidence 368999999999 578999999999997 57889999884 55666 5667777665543
No 43
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.19 E-value=9.6e-09 Score=121.07 Aligned_cols=54 Identities=22% Similarity=0.278 Sum_probs=46.7
Q ss_pred cccchHHHHHHHHHC--CCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcchhHHHH
Q 002117 661 SVTEDILTGFKMHCH--GWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILL 716 (964)
Q Consensus 661 sITED~~tglrL~~~--GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G~lQil~ 716 (964)
.+.||-.++..|.++ |||..|++.+.+ +..+|++++.+++||+||..|.+-.++
T Consensus 324 ~lGEDR~LttLlLk~~~~~k~~y~~~A~a--~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 324 DLGEDRWLTTLLLKQFPGYKTEYVPSAVA--YTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred hcchhHHHHHHHHhhCCCceEEEcccccc--cccCCccHHHHHHHhhhccchhHhhHh
Confidence 578999988777777 899999976554 899999999999999999999986543
No 44
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.16 E-value=1.1e-09 Score=112.62 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.6
Q ss_pred eeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCch
Q 002117 241 IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 286 (964)
Q Consensus 241 VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~ 286 (964)
|.|+||++| |+. .+..|+.|+++..|+ .+.|+|.|||..+
T Consensus 1 vsvii~~~n---~~~-~l~~~l~sl~~q~~~--~~evivvdd~s~d 40 (221)
T cd02522 1 LSIIIPTLN---EAE-NLPRLLASLRRLNPL--PLEIIVVDGGSTD 40 (221)
T ss_pred CEEEEEccC---cHH-HHHHHHHHHHhccCC--CcEEEEEeCCCCc
Confidence 579999998 764 789999999999984 5789999999875
No 45
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.16 E-value=6.8e-10 Score=112.97 Aligned_cols=57 Identities=16% Similarity=0.136 Sum_probs=46.8
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHh-hcCCCCCcceEEEecCeeecC
Q 002117 421 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCF-MMDPTSGKKICYVQFPQRFDG 486 (964)
Q Consensus 421 hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcf-f~Dp~~g~~v~~VQ~PQ~F~n 486 (964)
.+.+++|+|.+++ .++++||+++|+|.+ ..|+.|.+.+.. +.+| +.+++.....+.+
T Consensus 64 ~~G~~~~~n~g~~----~~~g~~v~~ld~Dd~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~ 121 (214)
T cd04196 64 NLGVARNFESLLQ----AADGDYVFFCDQDDI-WLPDKLERLLKAFLKDD----KPLLVYSDLELVD 121 (214)
T ss_pred CccHHHHHHHHHH----hCCCCEEEEECCCcc-cChhHHHHHHHHHhcCC----CceEEecCcEEEC
Confidence 3568999999988 578999999999997 689999999997 5566 6778888766543
No 46
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.15 E-value=1.7e-09 Score=118.35 Aligned_cols=110 Identities=19% Similarity=0.134 Sum_probs=83.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCchhhhhh
Q 002117 243 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQ 322 (964)
Q Consensus 243 vfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraPe~YFs~ 322 (964)
|+|||+| |++..+.+|+.|+++..||.....|.|.|||++.-|.+.+.+
T Consensus 2 IIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~---------------------------- 50 (299)
T cd02510 2 VIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLE---------------------------- 50 (299)
T ss_pred EEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHH----------------------------
Confidence 7999999 888999999999999999876678999999998743332111
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCCcccccC
Q 002117 323 KLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEG 402 (964)
Q Consensus 323 ~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g~~d~~g 402 (964)
.+.+
T Consensus 51 ----------------------~~~~------------------------------------------------------ 54 (299)
T cd02510 51 ----------------------EYYK------------------------------------------------------ 54 (299)
T ss_pred ----------------------HHHh------------------------------------------------------
Confidence 0000
Q ss_pred CCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002117 403 NLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 469 (964)
Q Consensus 403 ~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp 469 (964)
...|++.++..++ ...++.|.|.+++ .+.|+||+.+|+|.. +.+++|.+.+-.+..+
T Consensus 55 ~~~~~v~vi~~~~-----n~G~~~a~N~g~~----~A~gd~i~fLD~D~~-~~~~wL~~ll~~l~~~ 111 (299)
T cd02510 55 KYLPKVKVLRLKK-----REGLIRARIAGAR----AATGDVLVFLDSHCE-VNVGWLEPLLARIAEN 111 (299)
T ss_pred hcCCcEEEEEcCC-----CCCHHHHHHHHHH----HccCCEEEEEeCCcc-cCccHHHHHHHHHHhC
Confidence 0012456665554 2468899999999 578999999999997 5899999999877543
No 47
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.10 E-value=1.8e-09 Score=104.89 Aligned_cols=51 Identities=24% Similarity=0.166 Sum_probs=41.6
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecC
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFP 481 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~-Dp~~g~~v~~VQ~P 481 (964)
..+++|+|.+++ ..++++|+.+|+|.+ +.++++.+.+-.+. +| +++.|+..
T Consensus 60 ~g~~~a~n~~~~----~~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~~~----~~~~~~~~ 111 (166)
T cd04186 60 LGFGAGNNQGIR----EAKGDYVLLLNPDTV-VEPGALLELLDAAEQDP----DVGIVGPK 111 (166)
T ss_pred cChHHHhhHHHh----hCCCCEEEEECCCcE-ECccHHHHHHHHHHhCC----CceEEEcc
Confidence 468999999999 458999999999997 68999999987554 44 67777655
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.07 E-value=3.3e-09 Score=105.86 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=41.5
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeee
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRF 484 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F 484 (964)
..|++|+|.+++ .++++||+.+|+|.. +.+++|++.+-++ ++ .++ |..++..
T Consensus 65 ~~~~~~~n~g~~----~a~g~~i~~lD~D~~-~~~~~l~~~~~~~-~~----~~~-v~g~~~~ 116 (182)
T cd06420 65 FRKAKIRNKAIA----AAKGDYLIFIDGDCI-PHPDFIADHIELA-EP----GVF-LSGSRVL 116 (182)
T ss_pred hhHHHHHHHHHH----HhcCCEEEEEcCCcc-cCHHHHHHHHHHh-CC----CcE-Eecceee
Confidence 368999999999 579999999999996 7899999999877 44 343 4455443
No 49
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.06 E-value=3.3e-09 Score=110.04 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=35.4
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhh
Q 002117 243 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT 288 (964)
Q Consensus 243 vfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t 288 (964)
|+||+|| |+ ..+..|+-|+++.+|| +.+.++|.|||+.+-|
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t 41 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKS 41 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccH
Confidence 6899998 54 7999999999999998 4689999999998744
No 50
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.00 E-value=1e-08 Score=108.83 Aligned_cols=60 Identities=12% Similarity=0.045 Sum_probs=45.8
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecC
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFP 481 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~P 481 (964)
+.++.+++ ...|++|+|++++ .+.++||+.+|+|.. .+|++|.+.+..+.++ +...|...
T Consensus 70 v~~~~~~~-----n~G~~~a~n~g~~----~a~g~~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~ 129 (243)
T PLN02726 70 ILLRPRPG-----KLGLGTAYIHGLK----HASGDFVVIMDADLS-HHPKYLPSFIKKQRET----GADIVTGT 129 (243)
T ss_pred EEEEecCC-----CCCHHHHHHHHHH----HcCCCEEEEEcCCCC-CCHHHHHHHHHHHHhc----CCcEEEEc
Confidence 45555443 2358999999999 578999999999997 7999999999887665 35556543
No 51
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.99 E-value=7.6e-09 Score=99.32 Aligned_cols=63 Identities=30% Similarity=0.400 Sum_probs=47.3
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH-HhhcCCCCCcceEEEecCeee
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM-CFMMDPTSGKKICYVQFPQRF 484 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~am-cff~Dp~~g~~v~~VQ~PQ~F 484 (964)
+.++..++ ...|+.|+|.+++ ..++++|+++|+|.+ ..+++|.+.+ .++.++ +++.|......
T Consensus 55 ~~~~~~~~-----~~g~~~~~n~~~~----~~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~~~----~~~~v~~~~~~ 118 (180)
T cd06423 55 VLVVRDKE-----NGGKAGALNAGLR----HAKGDIVVVLDADTI-LEPDALKRLVVPFFADP----KVGAVQGRVRV 118 (180)
T ss_pred EEEEEecc-----cCCchHHHHHHHH----hcCCCEEEEECCCCC-cChHHHHHHHHHhccCC----CeeeEeeeEEE
Confidence 44555544 3469999999999 469999999999997 5899999994 455666 56677655444
No 52
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.98 E-value=3.9e-09 Score=109.97 Aligned_cols=66 Identities=20% Similarity=0.201 Sum_probs=45.2
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH---Hh-hcCCCCCcceEEEecCee
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM---CF-MMDPTSGKKICYVQFPQR 483 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~am---cf-f~Dp~~g~~v~~VQ~PQ~ 483 (964)
+.++..++. -.+|+|+|.+++.+. -.+++||+.+|+|.+ .+|++|.+++ .. ..++ +++.+ .|+.
T Consensus 49 i~~i~~~~n-----~G~~~a~N~g~~~a~-~~~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~~~~----~~~~~-~~~~ 116 (237)
T cd02526 49 IELIHLGEN-----LGIAKALNIGIKAAL-ENGADYVLLFDQDSV-PPPDMVEKLLAYKILSDKNS----NIGAV-GPRI 116 (237)
T ss_pred EEEEECCCc-----eehHHhhhHHHHHHH-hCCCCEEEEECCCCC-cCHhHHHHHHHHHHhhccCC----CeEEE-eeeE
Confidence 566666552 249999999999431 125699999999997 6899999985 32 2344 55554 5554
Q ss_pred ec
Q 002117 484 FD 485 (964)
Q Consensus 484 F~ 485 (964)
.+
T Consensus 117 ~~ 118 (237)
T cd02526 117 ID 118 (237)
T ss_pred Ec
Confidence 43
No 53
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.96 E-value=1.8e-08 Score=102.79 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=43.1
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeee
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRF 484 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F 484 (964)
+..+.++|.+++..- ...+++++.+|+|.+ +.+++|++.+..+.+| +++.| +|.++
T Consensus 62 ~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~-~~~~~l~~l~~~~~~~----~~~~~-~~~~~ 117 (202)
T cd04185 62 LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAI-PDPDALEKLLAYADKD----NPQFL-APLVL 117 (202)
T ss_pred cchhhHHHHHHHHHh-ccCCCEEEEeCCCCC-cChHHHHHHHHHHhcC----CceEe-cceeE
Confidence 357888998887432 467899999999997 6899999999988777 56665 34444
No 54
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.93 E-value=1.2e-09 Score=105.24 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=74.1
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecC
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDG 486 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n 486 (964)
++.|+.+++ +. .+++|+|.+++ ...++||+.+|+|.+ ..+++|.+.+.++.+.. ..+.+...+....+
T Consensus 54 ~i~~i~~~~----n~-g~~~~~n~~~~----~a~~~~i~~ld~D~~-~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~ 121 (169)
T PF00535_consen 54 NIRYIRNPE----NL-GFSAARNRGIK----HAKGEYILFLDDDDI-ISPDWLEELVEALEKNP--PDVVIGSVIYIDDD 121 (169)
T ss_dssp TEEEEEHCC----CS-HHHHHHHHHHH----H--SSEEEEEETTEE-E-TTHHHHHHHHHHHCT--TEEEEEEEEEEECT
T ss_pred ccccccccc----cc-ccccccccccc----ccceeEEEEeCCCce-EcHHHHHHHHHHHHhCC--CcEEEEEEEEecCC
Confidence 488999886 33 79999999999 688999999999997 57779999999998742 23444444444433
Q ss_pred CCcccccc--cchhhhhhhcccccccCCCcccccccchhhhhhh
Q 002117 487 IDRHDRYS--NRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQAL 528 (964)
Q Consensus 487 ~d~~d~~~--n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~AL 528 (964)
........ ......+............+.++|.++++||++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 122 NRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp TETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred ccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 22222111 1122333334445666678899999999999988
No 55
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.92 E-value=2.6e-08 Score=102.66 Aligned_cols=52 Identities=10% Similarity=0.027 Sum_probs=42.6
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCe
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQ 482 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ 482 (964)
..|++|+|.+++ .+.+++|+.+|+|.. .+|+.|...+..+.++ +.+.|..+.
T Consensus 64 ~G~~~a~n~g~~----~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~~ 115 (224)
T cd06442 64 RGLGSAYIEGFK----AARGDVIVVMDADLS-HPPEYIPELLEAQLEG----GADLVIGSR 115 (224)
T ss_pred CChHHHHHHHHH----HcCCCEEEEEECCCC-CCHHHHHHHHHHHhcC----CCCEEEEee
Confidence 468999999999 578899999999986 7899999999987766 345565543
No 56
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.70 E-value=3.7e-07 Score=102.46 Aligned_cols=110 Identities=14% Similarity=0.209 Sum_probs=83.1
Q ss_pred CCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCCCCCCc
Q 002117 237 DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAP 316 (964)
Q Consensus 237 ~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~iepraP 316 (964)
..|.|.|+||+|| ++ ..+..++-|+++..|+ .+.|.|.|||+++-|.+-
T Consensus 4 ~~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i------------------------- 52 (328)
T PRK10073 4 STPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEI------------------------- 52 (328)
T ss_pred CCCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHH-------------------------
Confidence 3578999999999 55 6889999999999997 478999999998733221
Q ss_pred hhhhhhccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeEeecCCC
Q 002117 317 EWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNG 396 (964)
Q Consensus 317 e~YFs~~~d~~~~~~~~~f~~e~r~mkr~yee~k~ri~~l~~~~~~vp~~~w~m~dg~~w~~~~~rdhp~iiqv~~~~~g 396 (964)
-++|.+
T Consensus 53 --------------------------~~~~~~------------------------------------------------ 58 (328)
T PRK10073 53 --------------------------AKHYAE------------------------------------------------ 58 (328)
T ss_pred --------------------------HHHHHh------------------------------------------------
Confidence 111111
Q ss_pred cccccCCCcCcEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002117 397 VRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 469 (964)
Q Consensus 397 ~~d~~g~~lP~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp 469 (964)
..|++.++..+ ....++|.|.+++ .+.|+||+.+|+|.+ ..|+.+.+.+..+.++
T Consensus 59 -------~~~~i~vi~~~------n~G~~~arN~gl~----~a~g~yi~flD~DD~-~~p~~l~~l~~~~~~~ 113 (328)
T PRK10073 59 -------NYPHVRLLHQA------NAGVSVARNTGLA----VATGKYVAFPDADDV-VYPTMYETLMTMALED 113 (328)
T ss_pred -------hCCCEEEEECC------CCChHHHHHHHHH----hCCCCEEEEECCCCc-cChhHHHHHHHHHHhC
Confidence 01235555432 2468999999999 589999999999998 5899999999877644
No 57
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.66 E-value=2.9e-07 Score=95.01 Aligned_cols=52 Identities=17% Similarity=0.099 Sum_probs=41.7
Q ss_pred CchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCee
Q 002117 423 KKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQR 483 (964)
Q Consensus 423 ~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~ 483 (964)
.|++|+|.+++ .+.+++|+.+|+|.. ..++.+.+.+..+.++ ....|.....
T Consensus 69 G~~~a~~~g~~----~a~gd~i~~ld~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~r~ 120 (211)
T cd04188 69 GKGGAVRAGML----AARGDYILFADADLA-TPFEELEKLEEALKTS----GYDIAIGSRA 120 (211)
T ss_pred CcHHHHHHHHH----HhcCCEEEEEeCCCC-CCHHHHHHHHHHHhcc----CCcEEEEEee
Confidence 58999999999 578999999999997 7899999999986655 2344555433
No 58
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.64 E-value=6.6e-07 Score=97.01 Aligned_cols=69 Identities=19% Similarity=0.245 Sum_probs=49.2
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeec
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFD 485 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~ 485 (964)
++.|+.-++ ....|||+|.+++.. .-.+++||+.+|.|.+ +.++.|.+.+..+..+ +.+++.|. |..++
T Consensus 46 ~i~~i~~~~-----N~G~a~a~N~Gi~~a-~~~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 46 KIALIHLGD-----NQGIAGAQNQGLDAS-FRRGVQGVLLLDQDSR-PGNAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CeEEEECCC-----CcchHHHHHHHHHHH-HHCCCCEEEEECCCCC-CCHHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 356666544 236899999999842 1237899999999997 6799999999877543 12677775 54443
No 59
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.63 E-value=2.1e-07 Score=92.89 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=50.1
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecC
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDG 486 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n 486 (964)
+.++..+++. .|++|+|.+++ .+.+++|+++|+|-. ..|++|.+.+..+..+ +..+|+.+....+
T Consensus 56 ~~~~~~~~n~-----G~~~a~n~g~~----~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~~~~~~ 120 (185)
T cd04179 56 VRVIRLSRNF-----GKGAAVRAGFK----AARGDIVVTMDADLQ-HPPEDIPKLLEKLLEG----GADVVIGSRFVRG 120 (185)
T ss_pred eEEEEccCCC-----CccHHHHHHHH----HhcCCEEEEEeCCCC-CCHHHHHHHHHHHhcc----CCcEEEEEeecCC
Confidence 4455555533 49999999999 578899999999986 6899999999986655 4667777766554
No 60
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.62 E-value=1.2e-06 Score=96.44 Aligned_cols=52 Identities=15% Similarity=0.276 Sum_probs=42.1
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD 468 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~D 468 (964)
++.|+..++ ...++.|+|.++. .++|+||+.+|+|.+ ..|+.|.+.+-++..
T Consensus 61 ri~~i~~~~-----n~G~~~a~N~gi~----~a~g~~I~~lDaDD~-~~p~~l~~~~~~~~~ 112 (279)
T PRK10018 61 RITYIHNDI-----NSGACAVRNQAIM----LAQGEYITGIDDDDE-WTPNRLSVFLAHKQQ 112 (279)
T ss_pred CEEEEECCC-----CCCHHHHHHHHHH----HcCCCEEEEECCCCC-CCccHHHHHHHHHHh
Confidence 577776654 3468999999999 589999999999997 578999988877643
No 61
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.52 E-value=2.2e-06 Score=92.53 Aligned_cols=47 Identities=15% Similarity=0.005 Sum_probs=36.5
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcC-CCCCCCcEEEEcCCCCchhhH
Q 002117 239 ADIDIFVSTVDPMKEPPLITANTVLSILAV-DYPVDKVACYVSDDGAAMLTF 289 (964)
Q Consensus 239 p~VDvfV~T~dp~kEp~~v~~nTvls~la~-DYP~~kl~~yvsDDG~s~~t~ 289 (964)
|.|.|+||||| |+ ..+..|+.|++++ ..+...+.+.|.|||.++-|.
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~ 48 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTR 48 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHH
Confidence 56899999998 64 5789999999864 233346899999999987443
No 62
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.41 E-value=4.4e-06 Score=78.23 Aligned_cols=52 Identities=25% Similarity=0.306 Sum_probs=41.8
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH-hhcCCCCCcceEEEecC
Q 002117 421 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC-FMMDPTSGKKICYVQFP 481 (964)
Q Consensus 421 hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amc-ff~Dp~~g~~v~~VQ~P 481 (964)
+..|++++|.++. ..++++++++|+|.+ ..|+++...+- +..++ +...|+.+
T Consensus 62 ~~g~~~~~~~~~~----~~~~d~v~~~d~D~~-~~~~~~~~~~~~~~~~~----~~~~v~~~ 114 (156)
T cd00761 62 NQGLAAARNAGLK----AARGEYILFLDADDL-LLPDWLERLVAELLADP----EADAVGGP 114 (156)
T ss_pred CCChHHHHHHHHH----HhcCCEEEEECCCCc-cCccHHHHHHHHHhcCC----CceEEecc
Confidence 4579999999999 458999999999997 68888888744 45555 67788777
No 63
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.39 E-value=6.4e-06 Score=90.37 Aligned_cols=63 Identities=13% Similarity=0.206 Sum_probs=46.2
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCCCcc
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRH 490 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~d~~ 490 (964)
-.+|.|.|.++. .+++++|+.+|+|.+ +.|+++.+++-+...=. ...-+++-.|..|.+.+..
T Consensus 74 f~~a~arN~g~~----~A~~d~l~flD~D~i-~~~~~i~~~~~~~~~l~-~~~~~~~~~p~~yl~~~~~ 136 (281)
T PF10111_consen 74 FSRAKARNIGAK----YARGDYLIFLDADCI-PSPDFIEKLLNHVKKLD-KNPNAFLVYPCLYLSEEGS 136 (281)
T ss_pred cCHHHHHHHHHH----HcCCCEEEEEcCCee-eCHHHHHHHHHHHHHHh-cCCCceEEEeeeeccchhh
Confidence 479999999999 579999999999996 78999999999321100 0134566677777765443
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.32 E-value=3.7e-06 Score=84.51 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=62.1
Q ss_pred EEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCeeecCC
Q 002117 408 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGI 487 (964)
Q Consensus 408 lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~VQ~PQ~F~n~ 487 (964)
+.++..++ +..|++|+|.+++ .+.+++|+.+|+|.. ..++.|.+.+.. +++. .++.+.+... .+.
T Consensus 57 i~~i~~~~-----n~G~~~a~n~g~~----~a~~d~i~~~D~D~~-~~~~~l~~l~~~-~~~~--~~~v~g~~~~--~~~ 121 (181)
T cd04187 57 VKVIRLSR-----NFGQQAALLAGLD----HARGDAVITMDADLQ-DPPELIPEMLAK-WEEG--YDVVYGVRKN--RKE 121 (181)
T ss_pred EEEEEecC-----CCCcHHHHHHHHH----hcCCCEEEEEeCCCC-CCHHHHHHHHHH-HhCC--CcEEEEEecC--Ccc
Confidence 55555544 2469999999999 578899999999996 689999999987 4442 2444433221 111
Q ss_pred CcccccccchhhhhhhcccccccCCCcccccccchhhhhhhc
Q 002117 488 DRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALY 529 (964)
Q Consensus 488 d~~d~~~n~~~vffdi~~~gldg~qgp~y~GTg~v~RR~ALy 529 (964)
....++.+ ..++. ....+.+..-+...|+.+++||+++-
T Consensus 122 ~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~ 160 (181)
T cd04187 122 SWLKRLTS--KLFYR-LINKLSGVDIPDNGGDFRLMDRKVVD 160 (181)
T ss_pred hHHHHHHH--HHHHH-HHHHHcCCCCCCCCCCEEEEcHHHHH
Confidence 11111111 11111 11222333445566777899999985
No 65
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.29 E-value=1.3e-05 Score=98.52 Aligned_cols=48 Identities=25% Similarity=0.333 Sum_probs=44.6
Q ss_pred cccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhcc
Q 002117 661 SVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 710 (964)
Q Consensus 661 sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~G 710 (964)
+..||-.+..++..+||+.-|+..+.+ ..++|+++..++.||+||..|
T Consensus 549 ~~geDR~L~~~llskgy~l~Y~a~s~a--~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 549 SLGEDRWLCTLLLSKGYRLKYVAASDA--ETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ccchhHHHHHHHHhccceeeeeccccc--cccCcHhHHHHHHHhhhhccc
Confidence 589999999999999999999976544 899999999999999999999
No 66
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.13 E-value=4.7e-05 Score=85.93 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=35.8
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD 468 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~D 468 (964)
..|++|+|++++ .+.|++|+++|+|.. .+++.+.+.+..+.+
T Consensus 148 ~G~~~A~~~Gi~----~a~gd~I~~~DaD~~-~~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 148 KGKGGAVRIGML----ASRGKYILMVDADGA-TDIDDFDKLEDIMLK 189 (333)
T ss_pred CChHHHHHHHHH----HccCCEEEEEeCCCC-CCHHHHHHHHHHHHH
Confidence 469999999999 468999999999996 688998888876653
No 67
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.12 E-value=1.5e-05 Score=88.91 Aligned_cols=51 Identities=16% Similarity=0.155 Sum_probs=42.8
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEec
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQF 480 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~-Dp~~g~~v~~VQ~ 480 (964)
..|++|+|.+++ .+++++|+.+|||....+|++|.+.+..+. || ++++|..
T Consensus 101 ~Gkg~A~~~g~~----~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 101 PGKGEALWRSLA----ATTGDIVVFVDADLINFDPMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred CCHHHHHHHHHH----hcCCCEEEEEeCccccCCHHHHHHHHHHHHhCC----CceEEEE
Confidence 479999999998 578999999999985368999999998775 77 5777764
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.03 E-value=0.00016 Score=80.23 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=47.2
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCC-EEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecCeee
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAP-YLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFPQRF 484 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p-~Il~lD~D~~~~~~~~Lr~amcff~-Dp~~g~~v~~VQ~PQ~F 484 (964)
.+.|+.-.+.- .=||+.|.+++.. +.++. |++.|+-|.+ .++++|.+.+-.+. +| .++.|+.-.+.
T Consensus 57 ~v~~i~~~~Nl-----G~agg~n~g~~~a--~~~~~~~~l~LN~D~~-~~~~~l~~ll~~~~~~~----~~~~~~~~i~~ 124 (305)
T COG1216 57 NVRLIENGENL-----GFAGGFNRGIKYA--LAKGDDYVLLLNPDTV-VEPDLLEELLKAAEEDP----AAGVVGPLIRN 124 (305)
T ss_pred cEEEEEcCCCc-----cchhhhhHHHHHH--hcCCCcEEEEEcCCee-eChhHHHHHHHHHHhCC----CCeEeeeeEec
Confidence 35555544422 3478888877742 34544 9999999975 79999999998664 55 78888777665
Q ss_pred cC
Q 002117 485 DG 486 (964)
Q Consensus 485 ~n 486 (964)
++
T Consensus 125 ~~ 126 (305)
T COG1216 125 YD 126 (305)
T ss_pred CC
Confidence 43
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.41 E-value=0.0011 Score=74.79 Aligned_cols=41 Identities=12% Similarity=0.094 Sum_probs=36.0
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM 467 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~ 467 (964)
..|++|+|++++ .+.|++++.+|||.. .+|+.+.+.+..+.
T Consensus 76 ~G~~~A~~~G~~----~A~gd~vv~~DaD~q-~~p~~i~~l~~~~~ 116 (325)
T PRK10714 76 YGQHSAIMAGFS----HVTGDLIITLDADLQ-NPPEEIPRLVAKAD 116 (325)
T ss_pred CCHHHHHHHHHH----hCCCCEEEEECCCCC-CCHHHHHHHHHHHH
Confidence 478999999999 578999999999997 78999999988764
No 70
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.36 E-value=0.0025 Score=72.16 Aligned_cols=159 Identities=26% Similarity=0.426 Sum_probs=108.7
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE-ecCeeecCCCcccccccchhh
Q 002117 421 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV-QFPQRFDGIDRHDRYSNRNVV 499 (964)
Q Consensus 421 hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V-Q~PQ~F~n~d~~d~~~n~~~v 499 (964)
-+-|-.||=-+.| ....|+|++.|.|-. -.|+.+.+..-=||.|+ |+|+| |+|-.++-..
T Consensus 155 ~npKInN~mpgy~----~a~ydlvlisDsgI~-m~pdtildm~t~M~she---kmalvtq~py~~dr~G----------- 215 (431)
T KOG2547|consen 155 LNPKINNMMPGYR----AAKYDLVLISDSGIF-MKPDTILDMATTMMSHE---KMALVTQTPYCKDRQG----------- 215 (431)
T ss_pred cChhhhccCHHHH----HhcCCEEEEecCCee-ecCchHHHHHHhhhccc---ceeeecCCceeecccc-----------
Confidence 3457777777778 478899999999987 58999999888888886 89998 7787764321
Q ss_pred hhhhcccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCccCCcchhhhhh
Q 002117 500 FFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYA 579 (964)
Q Consensus 500 ffdi~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (964)
|+.-+ .-+|-||. +-|-.|-| +|-.+ .|.+
T Consensus 216 -f~atl-------e~~~fgTs--h~r~yl~~--------------n~~~~---~c~t----------------------- 245 (431)
T KOG2547|consen 216 -FDATL-------EQVYFGTS--HPRIYLSG--------------NVLGF---NCST----------------------- 245 (431)
T ss_pred -chhhh-------hheeeccC--CceEEEcc--------------ccccc---cccc-----------------------
Confidence 11111 01344443 22222211 11111 1222
Q ss_pred hhhhhhcccccccccccCchhhHHhhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhcccccccccccccccccc
Q 002117 580 LENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIY 659 (964)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~ 659 (964)
|.|...++++++|.||+.. . .
T Consensus 246 ----------------------------gms~~mrK~~ld~~ggi~~----------------------------f---~ 266 (431)
T KOG2547|consen 246 ----------------------------GMSSMMRKEALDECGGISA----------------------------F---G 266 (431)
T ss_pred ----------------------------cHHHHHHHHHHHHhccHHH----------------------------H---H
Confidence 6778889999999999753 1 2
Q ss_pred ccccchHHHHHHHHHCCCEEEEeCCCCCcccccCCCCHHHHHHHHHHhhc
Q 002117 660 GSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWAL 709 (964)
Q Consensus 660 ~sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~sl~~~l~QR~RWa~ 709 (964)
+.+.||+..+-.+..+||++.+..-+ +-...+-.+...+..|-.||..
T Consensus 267 ~yLaedyFaaksllSRG~ksaist~p--alQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 267 GYLAEDYFAAKSLLSRGWKSAISTHP--ALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhcccc--hhhhhhhhHHHHHHHHHHHhhh
Confidence 47999999999999999999998643 2256666778888888899964
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.09 E-value=0.0037 Score=66.14 Aligned_cols=42 Identities=12% Similarity=0.229 Sum_probs=36.3
Q ss_pred CchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002117 423 KKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 469 (964)
Q Consensus 423 ~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp 469 (964)
..+.+.|.++. ...+++|+.+|+|.. ..++.+.+...++.++
T Consensus 58 g~~~~~n~~~~----~a~~d~vl~lDaD~~-~~~~~~~~l~~~~~~~ 99 (229)
T cd02511 58 GFGAQRNFALE----LATNDWVLSLDADER-LTPELADEILALLATD 99 (229)
T ss_pred ChHHHHHHHHH----hCCCCEEEEEeCCcC-cCHHHHHHHHHHHhCC
Confidence 57899999998 578899999999997 6899999998887654
No 72
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.02 E-value=0.0049 Score=58.57 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=39.8
Q ss_pred CCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhh
Q 002117 238 LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT 288 (964)
Q Consensus 238 lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t 288 (964)
.|.+.|+|||+| |+ ....++|.|++...|+. ..+.|.|||.++-|
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t 46 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGT 46 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCCh
Confidence 578999999999 66 89999999999999997 55999999999743
No 73
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=95.56 E-value=0.13 Score=58.75 Aligned_cols=41 Identities=22% Similarity=0.265 Sum_probs=34.6
Q ss_pred eEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCch
Q 002117 242 DIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 286 (964)
Q Consensus 242 DvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~ 286 (964)
-|+|.||| - |..+.+|+-|+++..+-.+...+||++||+..
T Consensus 3 PVlv~ayN---R-p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~ 43 (334)
T cd02514 3 PVLVIACN---R-PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE 43 (334)
T ss_pred CEEEEecC---C-HHHHHHHHHHHHhccccCCCceEEEEeCCCch
Confidence 47888997 4 69999999999998755567889999999875
No 74
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=93.10 E-value=1.5 Score=55.20 Aligned_cols=100 Identities=26% Similarity=0.344 Sum_probs=64.6
Q ss_pred hhhcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeC
Q 002117 604 EKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCI 683 (964)
Q Consensus 604 ~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~ 683 (964)
+-+||.-.+|-+--...-||++. |... =.++||+..|+....||-++.++.
T Consensus 381 rlHYGHPD~~n~~f~~TRGGvSK----------Ask~-------------------lhLsEDIfaG~n~~lRGG~i~h~e 431 (817)
T PF02364_consen 381 RLHYGHPDVFNRIFMTTRGGVSK----------ASKG-------------------LHLSEDIFAGMNATLRGGRIKHCE 431 (817)
T ss_pred hccCCCchhhhhhheeccCccch----------Hhhc-------------------ccccHHHHHHHHHHhcCCceeehh
Confidence 34577777666665667788864 2211 279999999999999999999983
Q ss_pred CCCCcccccCCC-CHHHHHHHHHHhhcchhHHHHhhccccccccCCCCCcchhhhH
Q 002117 684 PKRPAFKGSAPI-NLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSY 738 (964)
Q Consensus 684 p~~aaf~G~aP~-sl~~~l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Y 738 (964)
-.. .|..-+ .+..-..=-..-+.|+=+..+++. .+..+.+|.+..-+++
T Consensus 432 -y~q--cGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe---~yrLg~~ld~~R~LSf 481 (817)
T PF02364_consen 432 -YIQ--CGKGRDVGFNSILNFETKIASGMGEQMLSRE---YYRLGTRLDFFRFLSF 481 (817)
T ss_pred -hhh--cccccccCchhhhhhHhHhcCCccchhhhHH---HHHhhccCCHHHHHHH
Confidence 333 344332 233333334577889988888773 1112566777655553
No 75
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=90.15 E-value=1.5 Score=46.31 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=37.2
Q ss_pred cEEEEeccCCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002117 407 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 469 (964)
Q Consensus 407 ~lvYvsRekrpg~~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp 469 (964)
++.-..|.+.-|. .-|--+++. +..|+|+++.|||- .-.|+++-+.+-...|-
T Consensus 64 ~i~l~pR~~klGL-----gtAy~hgl~----~a~g~fiviMDaDl-sHhPk~ipe~i~lq~~~ 116 (238)
T KOG2978|consen 64 NILLKPRTKKLGL-----GTAYIHGLK----HATGDFIVIMDADL-SHHPKFIPEFIRLQKEG 116 (238)
T ss_pred cEEEEeccCcccc-----hHHHHhhhh----hccCCeEEEEeCcc-CCCchhHHHHHHHhhcc
Confidence 4677777764332 123344555 57899999999997 48899999887765554
No 76
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=76.55 E-value=34 Score=38.67 Aligned_cols=42 Identities=21% Similarity=0.181 Sum_probs=31.5
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCC--CCcHHHHHHHHHhhc
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHY--INNSKALREAMCFMM 467 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~--~~~~~~Lr~amcff~ 467 (964)
..|.||..-++- .+.|.+++..|||-- +++-..|..+|.=..
T Consensus 143 rgKGgAvR~g~l----~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 143 RGKGGAVRKGML----SSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred CCCCcceehhhH----hccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 357888775544 578999999999973 477788888886333
No 77
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=67.30 E-value=1.7e+02 Score=39.69 Aligned_cols=83 Identities=23% Similarity=0.293 Sum_probs=47.6
Q ss_pred cccchHHHHHHHHHCCCEEEEeCCCCCcccccCCC-CHHHHHHHHHHhhcchhHHHHhhccccccccCCCCCcchhhhH-
Q 002117 661 SVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPI-NLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSY- 738 (964)
Q Consensus 661 sITED~~tglrL~~~GwrsvY~~p~~aaf~G~aP~-sl~~~l~QR~RWa~G~lQil~~k~~Pl~~g~~~~Ls~~QRl~Y- 738 (964)
.+.||+..|+....||-++.+|. -.. .|..-+ .+..-..=-..-+.|+=|..+++. .|..+.++.+..-+.+
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E-YiQ--vGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd---~YrLG~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE-YIQ--VGKGRDVGLNQISNFEAKIANGNGEQTLSRD---YYRLGTQLDFFRMLSFY 1246 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce-eee--cccccccCcchhhhhhhhhcCCCcchhhhHH---HHHhcccccHHHHHHHH
Confidence 78999999999999999998883 222 122211 111111222456888888877763 2223556766554443
Q ss_pred hhhhhHHhHHH
Q 002117 739 INSVVYPITSI 749 (964)
Q Consensus 739 l~~~ly~l~sl 749 (964)
+.+.-+++.++
T Consensus 1247 ftt~GF~~n~m 1257 (1679)
T KOG0916|consen 1247 FTTVGFYFNNM 1257 (1679)
T ss_pred hccccHHHHhH
Confidence 33333444443
No 78
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=66.42 E-value=18 Score=38.91 Aligned_cols=49 Identities=27% Similarity=0.387 Sum_probs=38.9
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEE
Q 002117 422 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYV 478 (964)
Q Consensus 422 h~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff-~Dp~~g~~v~~V 478 (964)
..-|-+.|++++ .++++|++.+.=|..+.+++++.+.+-.| .|| ++|.|
T Consensus 40 ~s~~~~yN~a~~----~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAME----KAKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp S-TTTHHHHHGG----G--SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred cCHHHHHHHHHH----hCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 456789999999 68999999999999999999999999988 899 56555
No 79
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=57.60 E-value=46 Score=38.56 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=27.7
Q ss_pred CCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHH
Q 002117 420 DHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREA 462 (964)
Q Consensus 420 ~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~a 462 (964)
=...|+-.|=-++-... ..+.+||-.+|||.|+| -++.|-
T Consensus 140 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyiP--GaV~EY 179 (381)
T TIGR02460 140 VRSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYFP--GAVNEY 179 (381)
T ss_pred eecCcchHHHHHHHHHH-HhCCceEeEeecccCCC--chHHHH
Confidence 34578887775443322 45899999999999985 455553
No 80
>COG4707 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.52 E-value=5.1 Score=37.98 Aligned_cols=44 Identities=36% Similarity=0.605 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCC-------CCCCCCCcCCCccceeEeecCCCc
Q 002117 343 KREYEEFKVRINGLVAMAQKVPEDGWTMQDG-------TPWPGNNVRDHPGMIQVFLGQNGV 397 (964)
Q Consensus 343 kr~yee~k~ri~~l~~~~~~vp~~~w~m~dg-------~~w~~~~~rdhp~iiqv~~~~~g~ 397 (964)
|.||+|+|+. .-++|.|+|= +.|.-.+--.||.+.+.|--.+||
T Consensus 20 k~eyqel~~~-----------~~d~W~m~Dlk~k~~~~sd~tiknlL~hPrl~k~L~iengG 70 (107)
T COG4707 20 KVEYQELKEK-----------DFDGWVMMDLKEKKSNRSDWTIKNLLLHPRLKKMLSIENGG 70 (107)
T ss_pred HHHHHHHHHh-----------hhcchhhhHHHHHhcccchhHHHHHhcCchhhhheeeecCc
Confidence 5689998753 2368999876 456555567899999988777664
No 81
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=49.27 E-value=80 Score=37.20 Aligned_cols=48 Identities=17% Similarity=0.075 Sum_probs=36.4
Q ss_pred CCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCC
Q 002117 234 KPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGA 284 (964)
Q Consensus 234 ~~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~ 284 (964)
.|.+||++.|+|.-.| |--...++||-|++.-.=|.=--.|.+.||=.
T Consensus 150 Ype~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfS 197 (603)
T KOG3737|consen 150 YPENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFS 197 (603)
T ss_pred CcccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCC
Confidence 3688999999999999 99999999999998755332222356666633
No 82
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=48.18 E-value=1e+02 Score=33.01 Aligned_cols=64 Identities=13% Similarity=0.237 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCccch--hhHHHHHHHHHHHHHHHHHHHHhhc-CCCCcchh
Q 002117 863 LIPPLTLLVFNLIGVIIGVADAISNGYETWG--PLFGKLFFSLWVILHLYPFLKGFLG-KQDRLPTI 926 (964)
Q Consensus 863 ~iP~~~LliLnlvaiv~gi~r~i~~~~~~w~--~l~g~l~~~~Wvv~nl~pfl~gL~g-R~~r~P~~ 926 (964)
++-=..|+++.+++++.|+.-+++......| .+....+..+++.+.+|-+.--+.| |..|.++.
T Consensus 96 m~lDssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~ 162 (226)
T COG4858 96 MWLDSSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTW 162 (226)
T ss_pred EEecccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchH
Confidence 3334557888889999999888765433333 2344556777888888888776666 34577764
No 83
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=47.53 E-value=64 Score=37.69 Aligned_cols=40 Identities=28% Similarity=0.293 Sum_probs=27.8
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH
Q 002117 421 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM 463 (964)
Q Consensus 421 hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~am 463 (964)
...|+-.|=-++-... ..+.+||-.+|||.|+| -++.|-+
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyiP--GaV~EYv 181 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYIP--GAVNEYV 181 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCCC--chHHHHH
Confidence 4568877775443322 45899999999999985 4565533
No 84
>COG4818 Predicted membrane protein [Function unknown]
Probab=44.53 E-value=2.4e+02 Score=27.23 Aligned_cols=26 Identities=35% Similarity=0.459 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccce
Q 002117 814 IGGASSHLFALIQGLLKVVGGVNTNF 839 (964)
Q Consensus 814 I~~vsa~lfav~~aLlk~L~g~~~~F 839 (964)
|.+..+++++.+.+++-.|.-++.+|
T Consensus 5 iegaLCY~lgwitGllFlllEre~~F 30 (105)
T COG4818 5 IEGALCYLLGWITGLLFLLLERESKF 30 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHhhccCcc
Confidence 45566788888888887776666666
No 85
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=43.88 E-value=28 Score=42.85 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=41.3
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCch
Q 002117 235 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 286 (964)
Q Consensus 235 ~~~lp~VDvfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~ 286 (964)
.+.||++-|+|+-+| |...+...||-|+...-=|.---.+.|.||+...
T Consensus 138 ~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred ccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 466999999999999 9999999999999887655545578888998764
No 86
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=38.14 E-value=93 Score=28.30 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=19.6
Q ss_pred chhhhHHHHHhhccccCCCEEEEecCCCCC
Q 002117 424 KAGAMNALIRVSAVISNAPYLLNVDCDHYI 453 (964)
Q Consensus 424 KAGaLN~llrvSav~tn~p~Il~lD~D~~~ 453 (964)
+...+|++.+. ..++++++.+|||-++
T Consensus 58 ~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 58 QRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred HHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 34466666652 3588999999999874
No 87
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=37.94 E-value=8.6e+02 Score=30.67 Aligned_cols=25 Identities=28% Similarity=0.420 Sum_probs=17.3
Q ss_pred HhHHHHHHHHHHHHHHHHHhCCccc
Q 002117 745 PITSIPLIAYCTLPAICLLTGKFIV 769 (964)
Q Consensus 745 ~l~sl~~liylllP~l~Ll~G~~ii 769 (964)
+-+++..+..+.+|.+|...|..-+
T Consensus 47 ~~~a~~~i~liaip~i~~~ig~~~f 71 (952)
T TIGR02921 47 IEFALALILLIAIPAICIGIGGTCF 71 (952)
T ss_pred HHHHHHHHHHHHHHHHHhhhcchhh
Confidence 3456666777788988887776544
No 88
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=37.80 E-value=1.2e+02 Score=38.36 Aligned_cols=40 Identities=30% Similarity=0.283 Sum_probs=28.1
Q ss_pred CCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHH
Q 002117 420 DHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREA 462 (964)
Q Consensus 420 ~hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~a 462 (964)
=...|+-.|=-++-... ..+.+||-.+|||.|+|- ++.|-
T Consensus 145 vr~gk~egm~~g~~la~-~~g~~yvgfidadny~pg--~v~ey 184 (694)
T PRK14502 145 IRSGKAEGMILGIILTM-FSGRDYVGFIDTDNYIPG--AVWEY 184 (694)
T ss_pred eecCcchHHHHHHHHHH-hcCCceEeEeeccCCCCc--hHHHH
Confidence 34578888775443322 578999999999999854 55553
No 89
>PF07851 TMPIT: TMPIT-like protein; InterPro: IPR012926 A number of members of this family are annotated as being transmembrane proteins induced by tumour necrosis factor alpha, but no literature was found to support this. ; GO: 0016021 integral to membrane
Probab=37.76 E-value=6.3e+02 Score=29.43 Aligned_cols=19 Identities=21% Similarity=0.559 Sum_probs=13.9
Q ss_pred hccCcccccccccchhHHH
Q 002117 796 QWGGVGIHDWWRNEQFWVI 814 (964)
Q Consensus 796 rw~G~s~~~wWr~e~~W~I 814 (964)
+-.|-+++.||....|+.+
T Consensus 173 ~~NGS~Ik~WW~~HHy~s~ 191 (330)
T PF07851_consen 173 IVNGSRIKGWWVFHHYIST 191 (330)
T ss_pred ccCCCcchHHHHHHHHHHH
Confidence 3456778999988887753
No 90
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=35.41 E-value=2.8e+02 Score=30.45 Aligned_cols=60 Identities=18% Similarity=0.390 Sum_probs=46.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhHHHHhhhhHhHHHhhCC
Q 002117 243 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKI 311 (964)
Q Consensus 243 vfV~T~dp~kEp~~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~t~~al~Ea~~FA~~WvPFCkk~~i 311 (964)
|+|+|-+ ..|.|+-.|+..+.+-.++.+.+.+.=-.||.......-| .-+++ -||+.|+.
T Consensus 4 iLlatlG---~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll--~g~~~----~l~~~y~~ 63 (224)
T PF09623_consen 4 ILLATLG---TSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLL--DGGLQ----RLCQDYYL 63 (224)
T ss_pred EEEEecC---CCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHH--HHHHH----HHHHhhcC
Confidence 7899998 7779999999999999999998888888888877544433 11133 38888865
No 91
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=33.00 E-value=5.6e+02 Score=29.00 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=29.2
Q ss_pred hhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHh
Q 002117 425 AGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCF 465 (964)
Q Consensus 425 AGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcf 465 (964)
|.|=|.||- +++-....+|+-+|+|-+--.|+.+++.+..
T Consensus 128 AraRN~LL~-~aL~p~~swVlWlDaDIv~~P~~lI~dli~~ 167 (269)
T PF03452_consen 128 ARARNFLLS-SALGPWHSWVLWLDADIVETPPTLIQDLIAH 167 (269)
T ss_pred HHHHHHHHH-hhcCCcccEEEEEecCcccCChHHHHHHHhC
Confidence 344466665 4544588999999999986777888877763
No 92
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=32.97 E-value=47 Score=37.91 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=27.7
Q ss_pred ccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002117 438 ISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 478 (964)
Q Consensus 438 ~tn~p~Il~lD~D~~~~~~~~Lr~amcff~Dp~~g~~v~~V 478 (964)
.+..+||+++|.|++ |.+++-+....+..-.....+.+||
T Consensus 125 ~a~T~~v~~~DvD~~-ps~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 125 GARTDYVFLLDVDFL-PSPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred hcCcceEEEecceee-eCcchHHHHHHHhhhhccCCceEEE
Confidence 467799999999996 7877666666554322233467776
No 93
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=29.90 E-value=56 Score=38.05 Aligned_cols=58 Identities=26% Similarity=0.280 Sum_probs=31.3
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHH-----HHhhcCCCCCcceEEEecCeee
Q 002117 421 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREA-----MCFMMDPTSGKKICYVQFPQRF 484 (964)
Q Consensus 421 hh~KAGaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~a-----mcff~Dp~~g~~v~~VQ~PQ~F 484 (964)
.+.|+-.|=-++-+.. ....+||-.+|||.|+ |-++.|- -+|.|-+. .-++|---+++
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~yAAGf~ms~s---pytMVRi~W~~ 203 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDYAAGFAMSES---PYTMVRIHWRS 203 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHHHHHHHC-SS---SCEEEEEE---
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHHHhhhcccCC---CceEEEEEecC
Confidence 3568888876544333 4788999999999996 5666653 34555431 34555544443
No 94
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only]
Probab=25.14 E-value=4e+02 Score=32.48 Aligned_cols=79 Identities=24% Similarity=0.482 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH--Hhhh
Q 002117 865 PPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIF--SLLW 942 (964)
Q Consensus 865 P~~~LliLnlvaiv~gi~r~i~~~~~~w~~l~g~l~~~~Wvv~nl~pfl~gL~gR~~r~P~~v~~~s~~la~~f--~~l~ 942 (964)
|...+++++++++.+++.+++... ++|. -.++=+...=.++ -+++-+ |.|+.= +-+++|...| =.+|
T Consensus 311 ~~~~~l~l~~~Cia~aV~W~v~R~-e~~A-wilqDvLGIalci---~vLk~v-----RLPnlK-~~tiLL~c~f~YDiF~ 379 (541)
T KOG2442|consen 311 MSYRLLFLSILCIAVAVVWAVFRN-EDWA-WILQDVLGIALCI---TVLKTV-----RLPNLK-VCTILLLCLFLYDIFF 379 (541)
T ss_pred hhHHHHHHHHhhhheeEEEEEeec-CchH-HHHHhhHhHHHHH---HHHHHh-----cCCchh-HHHHHHHHHHHHhhhe
Confidence 455678888899888887776433 2343 1222111111111 234444 888752 2244444444 4699
Q ss_pred eeecCCCCCCCc
Q 002117 943 ARVNPFVSKGDI 954 (964)
Q Consensus 943 v~~~~~~~~~~~ 954 (964)
|-|.||..++|.
T Consensus 380 VFitp~~t~~ge 391 (541)
T KOG2442|consen 380 VFITPFITKNGE 391 (541)
T ss_pred eeeehhhccCCc
Confidence 999999999543
No 95
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=23.79 E-value=1.6e+02 Score=34.68 Aligned_cols=38 Identities=8% Similarity=0.155 Sum_probs=25.8
Q ss_pred hhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc
Q 002117 426 GAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM 467 (964)
Q Consensus 426 GaLN~llrvSav~tn~p~Il~lD~D~~~~~~~~Lr~amcff~ 467 (964)
..+-++++. + +.+++++.|||+=.-+++.+++.+..+.
T Consensus 85 ~SV~~gL~~---l-~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 85 ESVRNALEA---L-DSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHh---c-CCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 345555552 2 3489999999975457888888776543
No 96
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=23.15 E-value=44 Score=30.42 Aligned_cols=48 Identities=21% Similarity=0.226 Sum_probs=29.3
Q ss_pred hcCCcHHHHHhhhhhhCCCCCCCchhhHHHHHHHhhccccccccccccccccccccccchHHHHHHHHHCCCEEEEeC
Q 002117 606 KFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCI 683 (964)
Q Consensus 606 ~fG~s~~f~~S~l~e~GG~~~~~~~~~~l~eA~~v~sc~YE~~T~wgkevGw~~~sITED~~tglrL~~~GwrsvY~~ 683 (964)
-+|....+.++.+.++||+++. - .|| | -||.++..|+..+|.++...+
T Consensus 19 ~~Gg~~~~~~~~f~~vnGfde~----------------------f----~gW--G--~ED~Dl~~Rl~~~g~~~~~~~ 66 (78)
T PF02709_consen 19 FFGGVFAISREDFEKVNGFDER----------------------F----WGW--G--GEDDDLYNRLWKAGLKIVRVP 66 (78)
T ss_dssp ---SEEEEEHHHHHHTTSS-SS---------------------------TSC--S--SHHHHHHHHHHHTT---B-SS
T ss_pred eeEEEEEEeHHHHHHcCCCCcc----------------------c----ccc--C--ccHHHHHHHHHHcCCeEEecC
Confidence 3566666777778899998761 0 122 3 399999999999999877654
No 97
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=20.88 E-value=3.3e+02 Score=27.40 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=17.3
Q ss_pred chhhhHhHHHHHHhhhhhh-hhhc
Q 002117 95 TVAWKERMEEWKKKQNEKL-QVVK 117 (964)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~-~~~~ 117 (964)
|...+.|++.=|.+|+++. +.|.
T Consensus 21 s~E~~a~le~Lr~~~ee~eY~~mv 44 (142)
T PF11712_consen 21 SPELKARLERLRAEQEEREYQRMV 44 (142)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999998887543 3444
Done!